RK98_RS06510 51a9ed038a58db680bf277f59c883aee 337 SUPERFAMILY SSF53383 17 323 1.81E-52 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS06510 51a9ed038a58db680bf277f59c883aee 337 Gene3D G3DSA:3.40.640.10 44 229 8.3E-28 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS06510 51a9ed038a58db680bf277f59c883aee 337 Gene3D G3DSA:3.90.1150.10 230 324 7.1E-6 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS06510 51a9ed038a58db680bf277f59c883aee 337 Pfam PF00155 Aminotransferase class I and II 17 308 1.3E-35 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RK98_RS06510 51a9ed038a58db680bf277f59c883aee 337 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 183 192 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RK98_RS06510 51a9ed038a58db680bf277f59c883aee 337 Gene3D G3DSA:3.40.50.2300 4 43 0.19 T 28-03-2018 RK98_RS03670 6cc09b418597d531ce1af4bdeba1ea14 257 Gene3D G3DSA:3.20.20.140 1 257 4.6E-92 T 28-03-2018 RK98_RS03670 6cc09b418597d531ce1af4bdeba1ea14 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RK98_RS03670 6cc09b418597d531ce1af4bdeba1ea14 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 RK98_RS03670 6cc09b418597d531ce1af4bdeba1ea14 257 SUPERFAMILY SSF51556 2 256 1.95E-92 T 28-03-2018 IPR032466 Metal-dependent hydrolase RK98_RS03670 6cc09b418597d531ce1af4bdeba1ea14 257 Pfam PF01026 TatD related DNase 3 254 3.5E-83 T 28-03-2018 IPR001130 TatD family GO:0016788 RK98_RS03670 6cc09b418597d531ce1af4bdeba1ea14 257 PIRSF PIRSF005902 1 257 2.3E-84 T 28-03-2018 IPR001130 TatD family GO:0016788 RK98_RS03670 6cc09b418597d531ce1af4bdeba1ea14 257 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 2.0E-91 T 28-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 RK98_RS12710 5d79c38aba462e3f236ab2ea617bd908 256 Gene3D G3DSA:3.40.1180.10 10 255 1.3E-89 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RK98_RS12710 5d79c38aba462e3f236ab2ea617bd908 256 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 24 252 38.893 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RK98_RS12710 5d79c38aba462e3f236ab2ea617bd908 256 SUPERFAMILY SSF64005 19 246 5.1E-85 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RK98_RS12710 5d79c38aba462e3f236ab2ea617bd908 256 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 24 251 9.6E-83 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RK98_RS12710 5d79c38aba462e3f236ab2ea617bd908 256 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 197 214 - T 28-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 RK98_RS12710 5d79c38aba462e3f236ab2ea617bd908 256 Pfam PF01255 Putative undecaprenyl diphosphate synthase 31 251 1.0E-79 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 RK98_RS12500 11a34a53a31ce2f0172df29cdda363b5 291 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 281 1.0E-73 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 RK98_RS12500 11a34a53a31ce2f0172df29cdda363b5 291 Gene3D G3DSA:3.40.50.300 62 223 5.8E-17 T 28-03-2018 RK98_RS12500 11a34a53a31ce2f0172df29cdda363b5 291 Gene3D G3DSA:2.40.50.140 1 61 1.3E-17 T 28-03-2018 RK98_RS12500 11a34a53a31ce2f0172df29cdda363b5 291 SUPERFAMILY SSF50249 2 63 1.29E-12 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS12500 11a34a53a31ce2f0172df29cdda363b5 291 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 2 288 35.965 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 RK98_RS12500 11a34a53a31ce2f0172df29cdda363b5 291 SUPERFAMILY SSF52540 65 289 1.18E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12500 11a34a53a31ce2f0172df29cdda363b5 291 Gene3D G3DSA:1.10.40.50 225 291 2.2E-21 T 28-03-2018 RK98_RS12500 11a34a53a31ce2f0172df29cdda363b5 291 Pfam PF03193 RsgA GTPase 59 223 5.5E-53 T 28-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 RK98_RS12500 11a34a53a31ce2f0172df29cdda363b5 291 Pfam PF16745 RsgA N-terminal domain 3 56 1.6E-19 T 28-03-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 SUPERFAMILY SSF52540 550 855 1.15E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 66 1.3E-8 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 96 121 0.048 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 SMART SM00382 197 343 1.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 SMART SM00382 601 752 9.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Gene3D G3DSA:3.40.50.300 556 771 1.4E-52 T 28-03-2018 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 SUPERFAMILY SSF81923 4 154 1.83E-28 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Gene3D G3DSA:1.10.8.60 772 868 3.4E-23 T 28-03-2018 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Gene3D G3DSA:3.40.50.300 156 341 1.5E-27 T 28-03-2018 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 334 2.2E-15 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Gene3D G3DSA:1.10.1780.10 1 149 1.1E-20 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 772 852 6.5E-24 T 28-03-2018 IPR019489 Clp ATPase, C-terminal RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 SMART SM01086 772 862 1.7E-31 T 28-03-2018 IPR019489 Clp ATPase, C-terminal RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 766 1.6E-54 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 1.3E-41 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 1.3E-41 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 1.3E-41 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 1.3E-41 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 SUPERFAMILY SSF52540 158 549 1.89E-96 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 862 0.0 T 28-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Gene3D G3DSA:1.10.8.60 342 459 7.9E-40 T 28-03-2018 RK98_RS11165 ee864cf2610b0a4cb801d8f60d3ce83d 869 Gene3D G3DSA:1.10.8.60 460 551 2.8E-6 T 28-03-2018 RK98_RS09490 2cf0d945d1c57b1ab5181e82da70d7c3 106 Gene3D G3DSA:1.10.10.10 2 106 1.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS09490 2cf0d945d1c57b1ab5181e82da70d7c3 106 Pfam PF01022 Bacterial regulatory protein, arsR family 27 70 3.8E-10 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS09490 2cf0d945d1c57b1ab5181e82da70d7c3 106 SMART SM00418 18 96 6.7E-29 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS09490 2cf0d945d1c57b1ab5181e82da70d7c3 106 SUPERFAMILY SSF46785 11 99 1.18E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS09490 2cf0d945d1c57b1ab5181e82da70d7c3 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 2.6E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS09490 2cf0d945d1c57b1ab5181e82da70d7c3 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 2.6E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS09490 2cf0d945d1c57b1ab5181e82da70d7c3 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 2.6E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS03035 6868beb0aa4c8d2d0f5ca75386cffdbb 464 Pfam PF04740 LXG domain of WXG superfamily 28 191 1.9E-13 T 28-03-2018 IPR006829 LXG domain RK98_RS03035 6868beb0aa4c8d2d0f5ca75386cffdbb 464 Gene3D G3DSA:1.20.1170.10 6 376 4.6E-10 T 28-03-2018 RK98_RS03035 6868beb0aa4c8d2d0f5ca75386cffdbb 464 Gene3D G3DSA:1.20.1480.30 397 462 0.13 T 28-03-2018 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 Gene3D G3DSA:3.90.740.10 193 391 1.2E-71 T 28-03-2018 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 SUPERFAMILY SSF50677 201 394 7.22E-63 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 Gene3D G3DSA:3.40.50.620 41 120 2.5E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 Pfam PF06827 Zinc finger found in FPG and IleRS 883 912 9.9E-12 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 554 563 1.8E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.8E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 392 407 1.8E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 520 533 1.8E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 1.8E-32 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 SUPERFAMILY SSF47323 645 915 1.46E-82 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 Gene3D G3DSA:3.30.2320.20 793 881 2.0E-26 T 28-03-2018 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 26 634 7.7E-239 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 831 2.5E-298 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 Pfam PF08264 Anticodon-binding domain of tRNA 678 831 1.3E-28 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 Gene3D G3DSA:1.10.730.10 601 792 5.2E-40 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 Gene3D G3DSA:3.40.50.620 392 600 1.9E-50 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 SUPERFAMILY SSF52374 1 200 3.6E-153 T 28-03-2018 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 SUPERFAMILY SSF52374 394 641 3.6E-153 T 28-03-2018 RK98_RS12355 59a6f7970459153787b7aa865600ae92 917 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 914 20.806 T 28-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 RK98_RS13480 be127b472e50267888b008eac93fb303 361 SUPERFAMILY SSF51419 23 226 3.74E-33 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS13480 be127b472e50267888b008eac93fb303 361 SUPERFAMILY SSF50621 230 350 6.28E-24 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RK98_RS13480 be127b472e50267888b008eac93fb303 361 Gene3D G3DSA:3.20.20.10 10 216 3.2E-21 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS13480 be127b472e50267888b008eac93fb303 361 Pfam PF01168 Alanine racemase, N-terminal domain 20 223 6.8E-36 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS13480 be127b472e50267888b008eac93fb303 361 PRINTS PR00992 Alanine racemase signature 150 161 1.1E-17 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS13480 be127b472e50267888b008eac93fb303 361 PRINTS PR00992 Alanine racemase signature 22 38 1.1E-17 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS13480 be127b472e50267888b008eac93fb303 361 PRINTS PR00992 Alanine racemase signature 289 306 1.1E-17 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS13480 be127b472e50267888b008eac93fb303 361 PRINTS PR00992 Alanine racemase signature 196 223 1.1E-17 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS13480 be127b472e50267888b008eac93fb303 361 PRINTS PR00992 Alanine racemase signature 113 125 1.1E-17 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS13480 be127b472e50267888b008eac93fb303 361 PRINTS PR00992 Alanine racemase signature 269 284 1.1E-17 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS13480 be127b472e50267888b008eac93fb303 361 PRINTS PR00992 Alanine racemase signature 58 76 1.1E-17 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS13480 be127b472e50267888b008eac93fb303 361 Gene3D G3DSA:2.40.37.10 217 360 1.1E-28 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RK98_RS13480 be127b472e50267888b008eac93fb303 361 SMART SM01005 235 357 3.4E-23 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS13480 be127b472e50267888b008eac93fb303 361 Pfam PF00842 Alanine racemase, C-terminal domain 236 334 3.4E-19 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS13480 be127b472e50267888b008eac93fb303 361 Hamap MF_01201 Alanine racemase. 1 357 19.402 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 Pfam PF07724 AAA domain (Cdc48 subfamily) 448 603 4.8E-42 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 Gene3D G3DSA:3.40.50.300 77 264 1.5E-28 T 28-03-2018 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 528 546 2.7E-28 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 498 516 2.7E-28 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 453 471 2.7E-28 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 561 575 2.7E-28 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 Pfam PF02151 UvrB/uvrC motif 336 370 2.3E-5 T 28-03-2018 IPR001943 UVR domain GO:0005515 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 Gene3D G3DSA:1.10.8.60 265 399 1.2E-28 T 28-03-2018 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 Gene3D G3DSA:3.40.50.300 415 612 2.0E-31 T 28-03-2018 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 SUPERFAMILY SSF52540 398 681 2.14E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 611 682 3.4E-20 T 28-03-2018 IPR019489 Clp ATPase, C-terminal RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 123 257 2.3E-14 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 SMART SM01086 611 698 1.3E-27 T 28-03-2018 IPR019489 Clp ATPase, C-terminal RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 Gene3D G3DSA:1.10.8.60 613 701 4.2E-21 T 28-03-2018 RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 SMART SM00382 449 612 7.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 SMART SM00382 118 265 1.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS07230 2c61c9a03962093aed2831754b776bc1 701 SUPERFAMILY SSF52540 80 341 6.54E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05725 6aaf1661621ba247f35081f36b2e0d3a 326 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 14 299 1.5E-58 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS05725 6aaf1661621ba247f35081f36b2e0d3a 326 SUPERFAMILY SSF53686 9 317 1.44E-78 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS05725 6aaf1661621ba247f35081f36b2e0d3a 326 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 13 314 4.1E-135 T 28-03-2018 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA RK98_RS05725 6aaf1661621ba247f35081f36b2e0d3a 326 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 36 54 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RK98_RS05725 6aaf1661621ba247f35081f36b2e0d3a 326 Gene3D G3DSA:3.40.50.1100 143 320 2.1E-42 T 28-03-2018 RK98_RS05725 6aaf1661621ba247f35081f36b2e0d3a 326 Gene3D G3DSA:3.40.50.1100 24 142 3.9E-27 T 28-03-2018 RK98_RS00530 e666bb2a05db7ad715be6fe533636528 492 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 1 492 44.124 T 28-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 RK98_RS00530 e666bb2a05db7ad715be6fe533636528 492 Pfam PF13193 AMP-binding enzyme C-terminal domain 411 483 5.2E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain RK98_RS00530 e666bb2a05db7ad715be6fe533636528 492 Gene3D G3DSA:3.30.300.30 396 491 1.8E-24 T 28-03-2018 RK98_RS00530 e666bb2a05db7ad715be6fe533636528 492 Gene3D G3DSA:2.30.38.10 317 394 9.5E-14 T 28-03-2018 RK98_RS00530 e666bb2a05db7ad715be6fe533636528 492 Gene3D G3DSA:3.40.50.980 2 171 8.7E-24 T 28-03-2018 RK98_RS00530 e666bb2a05db7ad715be6fe533636528 492 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 26 489 1.1E-199 T 28-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 RK98_RS00530 e666bb2a05db7ad715be6fe533636528 492 Pfam PF00501 AMP-binding enzyme 7 401 5.4E-78 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RK98_RS00530 e666bb2a05db7ad715be6fe533636528 492 Gene3D G3DSA:3.40.50.980 172 316 3.0E-36 T 28-03-2018 RK98_RS00530 e666bb2a05db7ad715be6fe533636528 492 SUPERFAMILY SSF56801 5 490 5.63E-114 T 28-03-2018 RK98_RS12835 40856b3bdaff3b28859fbd17752e4897 192 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 82 2.4E-16 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RK98_RS12835 40856b3bdaff3b28859fbd17752e4897 192 PIRSF PIRSF000847 1 192 5.5E-51 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 RK98_RS12835 40856b3bdaff3b28859fbd17752e4897 192 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 RK98_RS12835 40856b3bdaff3b28859fbd17752e4897 192 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 190 6.1E-57 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 RK98_RS10095 66f2868bb446f6efcf634959942cb656 319 Gene3D G3DSA:3.40.1190.20 3 319 2.5E-67 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS10095 66f2868bb446f6efcf634959942cb656 319 SUPERFAMILY SSF53613 1 318 1.87E-77 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS10095 66f2868bb446f6efcf634959942cb656 319 Pfam PF00294 pfkB family carbohydrate kinase 1 311 1.7E-82 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB RK98_RS10095 66f2868bb446f6efcf634959942cb656 319 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RK98_RS10095 66f2868bb446f6efcf634959942cb656 319 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 34 58 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RK98_RS06905 57d3f8ddf6c3264e292b39fbf8dc81cb 532 Gene3D G3DSA:3.30.300.30 419 532 1.7E-29 T 28-03-2018 RK98_RS06905 57d3f8ddf6c3264e292b39fbf8dc81cb 532 Gene3D G3DSA:3.40.50.980 18 180 4.7E-31 T 28-03-2018 RK98_RS06905 57d3f8ddf6c3264e292b39fbf8dc81cb 532 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 510 4.7E-25 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain RK98_RS06905 57d3f8ddf6c3264e292b39fbf8dc81cb 532 SUPERFAMILY SSF56801 23 521 2.22E-141 T 28-03-2018 RK98_RS06905 57d3f8ddf6c3264e292b39fbf8dc81cb 532 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 28-03-2018 IPR020845 AMP-binding, conserved site RK98_RS06905 57d3f8ddf6c3264e292b39fbf8dc81cb 532 Gene3D G3DSA:3.40.50.980 181 332 7.9E-38 T 28-03-2018 RK98_RS06905 57d3f8ddf6c3264e292b39fbf8dc81cb 532 Pfam PF00501 AMP-binding enzyme 25 423 1.8E-83 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RK98_RS06905 57d3f8ddf6c3264e292b39fbf8dc81cb 532 Gene3D G3DSA:2.30.38.10 333 416 4.7E-21 T 28-03-2018 RK98_RS13750 d5bae0d6092f9b5b2b32c8cc922b1fdd 208 TIGRFAM TIGR00648 recU: recombination protein U 31 199 7.1E-94 T 28-03-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 RK98_RS13750 d5bae0d6092f9b5b2b32c8cc922b1fdd 208 PIRSF PIRSF037785 23 207 1.1E-81 T 28-03-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 RK98_RS13750 d5bae0d6092f9b5b2b32c8cc922b1fdd 208 SUPERFAMILY SSF52980 34 200 2.12E-65 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RK98_RS13750 d5bae0d6092f9b5b2b32c8cc922b1fdd 208 Pfam PF03838 Recombination protein U 32 197 6.4E-66 T 28-03-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 RK98_RS13750 d5bae0d6092f9b5b2b32c8cc922b1fdd 208 Gene3D G3DSA:3.40.1350.10 33 199 7.0E-63 T 28-03-2018 RK98_RS13750 d5bae0d6092f9b5b2b32c8cc922b1fdd 208 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 208 102.827 T 28-03-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 RK98_RS09230 2454622be743ac80603ca234024c631a 294 Gene3D G3DSA:3.40.50.1820 47 293 7.6E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS09230 2454622be743ac80603ca234024c631a 294 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 42 294 4.6E-103 T 28-03-2018 IPR010315 Protein of unknown function DUF915, hydrolase-like RK98_RS09230 2454622be743ac80603ca234024c631a 294 SUPERFAMILY SSF53474 49 287 1.53E-15 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS14280 ed4127708ae542a23837446bbc3834f5 487 Gene3D G3DSA:1.20.1540.10 154 334 2.3E-40 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RK98_RS14280 ed4127708ae542a23837446bbc3834f5 487 SUPERFAMILY SSF144091 155 337 4.19E-42 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RK98_RS14280 ed4127708ae542a23837446bbc3834f5 487 SUPERFAMILY SSF48452 370 479 1.0E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS14280 ed4127708ae542a23837446bbc3834f5 487 Gene3D G3DSA:1.25.40.10 368 487 2.3E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS14280 ed4127708ae542a23837446bbc3834f5 487 Pfam PF01694 Rhomboid family 199 333 1.3E-34 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 Pfam PF13426 PAS domain 274 368 4.5E-8 T 28-03-2018 IPR000014 PAS domain RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 SMART SM00304 204 256 1.9E-14 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 Gene3D G3DSA:3.30.450.20 249 371 1.2E-22 T 28-03-2018 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 539 6.0E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 584 597 6.0E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 578 6.0E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 553 6.0E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 SMART SM00387 486 600 3.7E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 Gene3D G3DSA:3.30.450.20 35 178 1.5E-12 T 28-03-2018 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 SUPERFAMILY SSF55785 252 367 1.34E-12 T 28-03-2018 IPR000014 PAS domain RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 Pfam PF00672 HAMP domain 204 252 7.8E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 SUPERFAMILY SSF55874 431 599 4.85E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 SUPERFAMILY SSF158472 204 253 1.01E-9 T 28-03-2018 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 SMART SM00388 375 442 2.3E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 Pfam PF00512 His Kinase A (phospho-acceptor) domain 376 441 2.7E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 487 598 5.0E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 SUPERFAMILY SSF47384 360 441 1.31E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 SMART SM00091 263 329 1.2E-8 T 28-03-2018 IPR000014 PAS domain RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 Gene3D G3DSA:3.30.565.10 449 600 3.3E-41 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 Gene3D G3DSA:1.10.287.130 372 438 2.8E-19 T 28-03-2018 RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 261 375 1.6E-11 T 28-03-2018 IPR000014 PAS domain RK98_RS06215 73df98481edbb3ff681f8134721ecd69 608 SUPERFAMILY SSF103190 63 180 2.24E-6 T 28-03-2018 IPR029151 Periplasmic sensor domain-like RK98_RS14970 3185ce46c61d8c1ba224abbcbe21c6e1 175 ProSitePatterns PS00938 Initiation factor 3 signature. 62 75 - T 28-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 RK98_RS14970 3185ce46c61d8c1ba224abbcbe21c6e1 175 Gene3D G3DSA:3.10.20.80 6 82 6.9E-31 T 28-03-2018 RK98_RS14970 3185ce46c61d8c1ba224abbcbe21c6e1 175 SUPERFAMILY SSF55200 86 174 1.83E-32 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 RK98_RS14970 3185ce46c61d8c1ba224abbcbe21c6e1 175 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 4 174 30.523 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RK98_RS14970 3185ce46c61d8c1ba224abbcbe21c6e1 175 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 11 79 8.3E-31 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RK98_RS14970 3185ce46c61d8c1ba224abbcbe21c6e1 175 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 87 171 3.5E-38 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 RK98_RS14970 3185ce46c61d8c1ba224abbcbe21c6e1 175 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 11 173 8.1E-70 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RK98_RS14970 3185ce46c61d8c1ba224abbcbe21c6e1 175 Gene3D G3DSA:3.30.110.10 83 175 1.7E-34 T 28-03-2018 RK98_RS14970 3185ce46c61d8c1ba224abbcbe21c6e1 175 SUPERFAMILY SSF54364 9 82 1.57E-29 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 RK98_RS06145 26010e9416f0abd6b55415eff1a1304a 224 Gene3D G3DSA:3.30.420.10 70 217 1.2E-16 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS06145 26010e9416f0abd6b55415eff1a1304a 224 Gene3D G3DSA:1.10.10.10 5 69 3.5E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06145 26010e9416f0abd6b55415eff1a1304a 224 SUPERFAMILY SSF53098 69 216 4.8E-10 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS06145 26010e9416f0abd6b55415eff1a1304a 224 Pfam PF13610 DDE domain 72 203 1.1E-38 T 28-03-2018 IPR032874 DDE domain RK98_RS06175 26010e9416f0abd6b55415eff1a1304a 224 Gene3D G3DSA:3.30.420.10 70 217 1.2E-16 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS06175 26010e9416f0abd6b55415eff1a1304a 224 Gene3D G3DSA:1.10.10.10 5 69 3.5E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06175 26010e9416f0abd6b55415eff1a1304a 224 SUPERFAMILY SSF53098 69 216 4.8E-10 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS06175 26010e9416f0abd6b55415eff1a1304a 224 Pfam PF13610 DDE domain 72 203 1.1E-38 T 28-03-2018 IPR032874 DDE domain RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 Gene3D G3DSA:3.30.413.10 623 800 5.3E-36 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 SUPERFAMILY SSF51905 144 305 5.44E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 SUPERFAMILY SSF51905 3 193 4.15E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 554 615 6.3E-11 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 SUPERFAMILY SSF55124 511 616 8.01E-24 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 Gene3D G3DSA:3.90.480.10 427 620 1.8E-13 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PIRSF PIRSF037149 1 800 0.0 T 28-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 786 6.3E-281 T 28-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 Gene3D G3DSA:3.50.50.60 243 314 5.4E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 SUPERFAMILY SSF56014 627 794 2.22E-46 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 Pfam PF04324 BFD-like [2Fe-2S] binding domain 479 529 1.2E-12 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 Pfam PF04324 BFD-like [2Fe-2S] binding domain 415 464 8.5E-18 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00397 Sirohaem Fe-binding site signature 671 689 3.2E-5 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00397 Sirohaem Fe-binding site signature 628 646 3.2E-5 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 624 759 2.2E-25 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 Gene3D G3DSA:3.50.50.60 1 102 7.9E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 Gene3D G3DSA:3.50.50.60 103 241 7.2E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.8E-12 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 2.8E-12 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 2.8E-12 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 2.8E-12 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 671 687 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 281 7.5E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.8E-19 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.8E-19 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.8E-19 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 5.8E-19 T 28-03-2018 RK98_RS08100 2bcdb23f524e5f8dd5b6dbb04a79381e 801 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 5.8E-19 T 28-03-2018 RK98_RS02760 cb784957beec8c6123f6c18c8a62733a 338 Gene3D G3DSA:1.10.3470.10 5 338 4.2E-66 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS02760 cb784957beec8c6123f6c18c8a62733a 338 Pfam PF01032 FecCD transport family 20 334 5.6E-87 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RK98_RS02760 cb784957beec8c6123f6c18c8a62733a 338 SUPERFAMILY SSF81345 5 334 4.97E-78 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS03140 67659f32d6003f37d2ebab1cc6a1a9a9 121 PIRSF PIRSF032370 1 121 1.7E-57 T 28-03-2018 IPR016994 Uncharacterised conserved protein UCP032370, VraC RK98_RS05600 a996cc316d360e067b462fa5072faff6 392 Gene3D G3DSA:3.40.720.10 278 387 1.0E-12 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RK98_RS05600 a996cc316d360e067b462fa5072faff6 392 SUPERFAMILY SSF53649 218 391 1.83E-76 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RK98_RS05600 a996cc316d360e067b462fa5072faff6 392 SUPERFAMILY SSF53649 4 101 1.83E-76 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RK98_RS05600 a996cc316d360e067b462fa5072faff6 392 Hamap MF_00740 Phosphopentomutase [deoB]. 5 388 52.645 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RK98_RS05600 a996cc316d360e067b462fa5072faff6 392 TIGRFAM TIGR01696 deoB: phosphopentomutase 7 386 9.2E-225 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RK98_RS05600 a996cc316d360e067b462fa5072faff6 392 SUPERFAMILY SSF143856 101 217 1.31E-50 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RK98_RS05600 a996cc316d360e067b462fa5072faff6 392 PIRSF PIRSF001491 4 392 2.8E-162 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RK98_RS05600 a996cc316d360e067b462fa5072faff6 392 Pfam PF01676 Metalloenzyme superfamily 7 378 2.1E-38 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 RK98_RS05600 a996cc316d360e067b462fa5072faff6 392 Gene3D G3DSA:3.30.70.1250 100 217 3.8E-55 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 SUPERFAMILY SSF51569 3 323 9.52E-139 T 28-03-2018 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 Gene3D G3DSA:3.20.20.70 1 324 4.3E-148 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 4 320 1.2E-145 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 241 253 - T 28-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 SMART SM01004 1 322 1.0E-224 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 PIRSF PIRSF001415 1 324 2.9E-149 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 119 133 5.6E-58 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 281 5.6E-58 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 296 315 5.6E-58 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 5.6E-58 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 241 257 5.6E-58 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RK98_RS14900 accce24ce11d735450f8bb813cb3255e 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 5.6E-58 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 RK98_RS13410 e56f8cfe467579f477a89f3ad3e1981c 283 SUPERFAMILY SSF52540 27 270 8.64E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13410 e56f8cfe467579f477a89f3ad3e1981c 283 Pfam PF00005 ABC transporter 52 208 1.1E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS13410 e56f8cfe467579f477a89f3ad3e1981c 283 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 37 283 5.4E-129 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 RK98_RS13410 e56f8cfe467579f477a89f3ad3e1981c 283 Gene3D G3DSA:3.40.50.300 22 281 1.4E-60 T 28-03-2018 RK98_RS13410 e56f8cfe467579f477a89f3ad3e1981c 283 ProSitePatterns PS00211 ABC transporters family signature. 180 194 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS13410 e56f8cfe467579f477a89f3ad3e1981c 283 SMART SM00382 61 254 9.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS01665 1a803fa179061670f8a1000e2888cffb 120 Pfam PF05521 Phage head-tail joining protein 16 115 2.6E-5 T 28-03-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor RK98_RS03855 f626e9f6b318d01f045f09f7ce2d960a 341 SMART SM00382 30 226 2.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS03855 f626e9f6b318d01f045f09f7ce2d960a 341 Pfam PF09383 NIL domain 269 339 8.7E-10 T 28-03-2018 IPR018449 NIL domain RK98_RS03855 f626e9f6b318d01f045f09f7ce2d960a 341 SMART SM00930 264 340 8.0E-10 T 28-03-2018 IPR018449 NIL domain RK98_RS03855 f626e9f6b318d01f045f09f7ce2d960a 341 SUPERFAMILY SSF55021 259 340 7.67E-10 T 28-03-2018 RK98_RS03855 f626e9f6b318d01f045f09f7ce2d960a 341 Pfam PF00005 ABC transporter 21 169 3.2E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS03855 f626e9f6b318d01f045f09f7ce2d960a 341 SUPERFAMILY SSF52540 1 240 1.4E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03855 f626e9f6b318d01f045f09f7ce2d960a 341 Gene3D G3DSA:3.40.50.300 1 254 6.6E-76 T 28-03-2018 RK98_RS03855 f626e9f6b318d01f045f09f7ce2d960a 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS03855 f626e9f6b318d01f045f09f7ce2d960a 341 Gene3D G3DSA:3.30.70.260 255 341 9.9E-11 T 28-03-2018 RK98_RS10285 d436b7e1fc90b0d245b3c97e88f1f739 242 Gene3D G3DSA:3.40.190.10 1 194 1.9E-5 T 28-03-2018 RK98_RS10285 d436b7e1fc90b0d245b3c97e88f1f739 242 Pfam PF16729 Domain of unknown function (DUF5067) 46 175 2.3E-20 T 28-03-2018 IPR031989 Domain of unknown function DUF5067 RK98_RS09635 c0e1d2a2bb55c40b3cf1ed0f0f71eb67 358 Gene3D G3DSA:1.20.58.410 2 94 4.2E-18 T 28-03-2018 RK98_RS09635 c0e1d2a2bb55c40b3cf1ed0f0f71eb67 358 Gene3D G3DSA:3.30.160.20 208 288 4.2E-29 T 28-03-2018 RK98_RS09635 c0e1d2a2bb55c40b3cf1ed0f0f71eb67 358 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 354 39.981 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RK98_RS09635 c0e1d2a2bb55c40b3cf1ed0f0f71eb67 358 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 354 1.0E-159 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 RK98_RS09635 c0e1d2a2bb55c40b3cf1ed0f0f71eb67 358 SMART SM00937 63 177 2.3E-63 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 RK98_RS09635 c0e1d2a2bb55c40b3cf1ed0f0f71eb67 358 Pfam PF00472 RF-1 domain 210 318 5.4E-40 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RK98_RS09635 c0e1d2a2bb55c40b3cf1ed0f0f71eb67 358 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 RK98_RS09635 c0e1d2a2bb55c40b3cf1ed0f0f71eb67 358 Pfam PF03462 PCRF domain 9 202 3.6E-74 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 RK98_RS09635 c0e1d2a2bb55c40b3cf1ed0f0f71eb67 358 SUPERFAMILY SSF75620 8 350 7.98E-133 T 28-03-2018 RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 Gene3D G3DSA:3.40.50.720 188 371 2.2E-45 T 28-03-2018 RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 Gene3D G3DSA:3.40.50.720 1 187 4.6E-42 T 28-03-2018 RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 SMART SM01003 4 136 5.7E-73 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 7.4E-45 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 PIRSF PIRSF000183 1 371 2.5E-207 T 28-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 SUPERFAMILY SSF52283 305 360 1.79E-64 T 28-03-2018 RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 SUPERFAMILY SSF52283 1 136 1.79E-64 T 28-03-2018 RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 SUPERFAMILY SSF51735 136 303 1.47E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 371 6.2E-173 T 28-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 353 4.6E-85 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 28-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 28-03-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 RK98_RS00075 3199a0766fc3ad4071a2e5f2aba5c0b6 372 SMART SM01002 148 297 6.0E-90 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RK98_RS11070 782d790bf89ffae2932e39c3840c0eda 125 Pfam PF00575 S1 RNA binding domain 5 75 7.0E-14 T 28-03-2018 IPR003029 S1 domain GO:0003676 RK98_RS11070 782d790bf89ffae2932e39c3840c0eda 125 SMART SM00316 5 75 2.4E-22 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS11070 782d790bf89ffae2932e39c3840c0eda 125 Gene3D G3DSA:2.40.50.140 3 107 1.8E-24 T 28-03-2018 RK98_RS11070 782d790bf89ffae2932e39c3840c0eda 125 SUPERFAMILY SSF50249 2 76 8.24E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS03790 468302c16f65e93a4d8e69fa6bcc9476 475 Pfam PF00367 phosphotransferase system, EIIB 9 42 1.6E-15 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS03790 468302c16f65e93a4d8e69fa6bcc9476 475 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 463 2.7E-212 T 28-03-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.201|MetaCyc: PWY-6619 RK98_RS03790 468302c16f65e93a4d8e69fa6bcc9476 475 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 110 2.1E-17 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS03790 468302c16f65e93a4d8e69fa6bcc9476 475 SUPERFAMILY SSF55604 8 82 3.01E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS03790 468302c16f65e93a4d8e69fa6bcc9476 475 Gene3D G3DSA:3.30.1360.60 5 82 2.1E-25 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS03790 468302c16f65e93a4d8e69fa6bcc9476 475 Pfam PF02378 Phosphotransferase system, EIIC 111 406 2.8E-41 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS03790 468302c16f65e93a4d8e69fa6bcc9476 475 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS06955 d7b503f0eb18c3d60346ebe80a504286 286 SUPERFAMILY SSF48179 160 283 2.07E-31 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS06955 d7b503f0eb18c3d60346ebe80a504286 286 SUPERFAMILY SSF51735 4 127 9.14E-12 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS06955 d7b503f0eb18c3d60346ebe80a504286 286 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 160 283 3.4E-29 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 RK98_RS06955 d7b503f0eb18c3d60346ebe80a504286 286 Gene3D G3DSA:1.10.1040.10 160 286 3.0E-33 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RK98_RS06955 d7b503f0eb18c3d60346ebe80a504286 286 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 130 3.1E-16 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 RK98_RS06955 d7b503f0eb18c3d60346ebe80a504286 286 Gene3D G3DSA:3.40.50.720 3 159 7.4E-20 T 28-03-2018 RK98_RS06955 d7b503f0eb18c3d60346ebe80a504286 286 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 4 284 1.2E-50 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 RK98_RS15115 336a54c6631532edf53c02514e4a950c 224 Pfam PF13610 DDE domain 72 203 7.8E-39 T 28-03-2018 IPR032874 DDE domain RK98_RS15115 336a54c6631532edf53c02514e4a950c 224 SUPERFAMILY SSF53098 70 215 8.09E-10 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS15115 336a54c6631532edf53c02514e4a950c 224 Gene3D G3DSA:1.10.10.10 5 69 4.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS15115 336a54c6631532edf53c02514e4a950c 224 Gene3D G3DSA:3.30.420.10 70 220 1.8E-16 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS11170 68bfdedd365234522ace0d806c9a093e 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 2.7E-11 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS11170 68bfdedd365234522ace0d806c9a093e 289 Pfam PF03466 LysR substrate binding domain 90 281 2.7E-22 T 28-03-2018 IPR005119 LysR, substrate-binding RK98_RS11170 68bfdedd365234522ace0d806c9a093e 289 Gene3D G3DSA:1.10.10.10 1 83 4.4E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS11170 68bfdedd365234522ace0d806c9a093e 289 SUPERFAMILY SSF46785 1 80 2.56E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS11170 68bfdedd365234522ace0d806c9a093e 289 Gene3D G3DSA:3.40.190.10 90 224 1.4E-10 T 28-03-2018 RK98_RS11170 68bfdedd365234522ace0d806c9a093e 289 SUPERFAMILY SSF53850 91 287 6.98E-14 T 28-03-2018 RK98_RS05650 dcb4cb74464c10c8f377bef7e541880e 388 Pfam PF00534 Glycosyl transferases group 1 210 363 2.0E-26 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 RK98_RS05650 dcb4cb74464c10c8f377bef7e541880e 388 Gene3D G3DSA:3.40.50.2000 4 192 2.3E-13 T 28-03-2018 RK98_RS05650 dcb4cb74464c10c8f377bef7e541880e 388 Gene3D G3DSA:3.40.50.2000 211 377 1.5E-31 T 28-03-2018 RK98_RS05650 dcb4cb74464c10c8f377bef7e541880e 388 SUPERFAMILY SSF53756 3 383 1.08E-65 T 28-03-2018 RK98_RS05650 dcb4cb74464c10c8f377bef7e541880e 388 Pfam PF13439 Glycosyltransferase Family 4 13 174 3.2E-22 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 RK98_RS05035 cabe0d6a21571e912fdf49eae3a39efa 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 132 1.5E-34 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RK98_RS05035 cabe0d6a21571e912fdf49eae3a39efa 351 SMART SM00829 10 339 2.2E-7 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RK98_RS05035 cabe0d6a21571e912fdf49eae3a39efa 351 Gene3D G3DSA:3.40.50.720 156 316 1.0E-26 T 28-03-2018 RK98_RS05035 cabe0d6a21571e912fdf49eae3a39efa 351 SUPERFAMILY SSF51735 137 307 4.79E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05035 cabe0d6a21571e912fdf49eae3a39efa 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RK98_RS05035 cabe0d6a21571e912fdf49eae3a39efa 351 SUPERFAMILY SSF50129 2 170 5.02E-51 T 28-03-2018 IPR011032 GroES-like RK98_RS05035 cabe0d6a21571e912fdf49eae3a39efa 351 Gene3D G3DSA:3.90.180.10 1 155 3.0E-48 T 28-03-2018 RK98_RS05035 cabe0d6a21571e912fdf49eae3a39efa 351 Pfam PF00107 Zinc-binding dehydrogenase 173 303 6.1E-26 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RK98_RS08845 1da5ec03fe12b5156c7f0d9f2de6d05d 421 Pfam PF02388 FemAB family 6 403 2.6E-83 T 28-03-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 RK98_RS08845 1da5ec03fe12b5156c7f0d9f2de6d05d 421 SUPERFAMILY SSF55729 302 400 1.01E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS08845 1da5ec03fe12b5156c7f0d9f2de6d05d 421 SUPERFAMILY SSF55729 155 235 1.01E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS08845 1da5ec03fe12b5156c7f0d9f2de6d05d 421 Gene3D G3DSA:3.40.630.30 1 157 1.6E-42 T 28-03-2018 RK98_RS08845 1da5ec03fe12b5156c7f0d9f2de6d05d 421 Gene3D G3DSA:3.40.630.30 158 381 7.7E-33 T 28-03-2018 RK98_RS08845 1da5ec03fe12b5156c7f0d9f2de6d05d 421 SUPERFAMILY SSF55729 1 153 3.97E-40 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS09860 8bff14c833fecd75580ceabdaa1025e9 36 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 13 36 1.0E-8 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RK98_RS09860 8bff14c833fecd75580ceabdaa1025e9 36 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 13 36 4.0E-8 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 Gene3D G3DSA:3.90.740.10 189 235 4.6E-14 T 28-03-2018 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 Gene3D G3DSA:1.10.730.10 518 743 7.3E-75 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 810 875 4.9E-23 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 SUPERFAMILY SSF47323 571 825 7.48E-72 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 857 0.0 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 875 15.975 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 SUPERFAMILY SSF50677 191 342 1.96E-62 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 Gene3D G3DSA:1.10.287.380 803 873 1.2E-26 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 SUPERFAMILY SSF52374 341 570 1.3E-141 T 28-03-2018 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 SUPERFAMILY SSF52374 2 193 1.3E-141 T 28-03-2018 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 Pfam PF08264 Anticodon-binding domain of tRNA 604 750 4.5E-42 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 55 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 Gene3D G3DSA:3.90.740.10 236 433 6.9E-63 T 28-03-2018 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 Gene3D G3DSA:3.40.50.620 434 517 2.5E-30 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 559 1.2E-215 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 Gene3D G3DSA:3.40.50.620 17 188 3.1E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 SUPERFAMILY SSF46589 810 874 3.14E-17 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 PRINTS PR00986 Valyl-tRNA synthetase signature 346 359 3.6E-38 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 PRINTS PR00986 Valyl-tRNA synthetase signature 37 48 3.6E-38 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 PRINTS PR00986 Valyl-tRNA synthetase signature 472 490 3.6E-38 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 3.6E-38 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RK98_RS14875 8456de476ed998d369abdbfb69ab6d77 876 PRINTS PR00986 Valyl-tRNA synthetase signature 440 461 3.6E-38 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 RK98_RS07120 e9b4e7cd6d51862a132392c5807ab92a 233 Pfam PF01464 Transglycosylase SLT domain 163 204 1.0E-6 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 RK98_RS07120 e9b4e7cd6d51862a132392c5807ab92a 233 Gene3D G3DSA:1.10.530.10 105 228 5.5E-15 T 28-03-2018 RK98_RS07120 e9b4e7cd6d51862a132392c5807ab92a 233 SUPERFAMILY SSF53955 165 218 1.46E-11 T 28-03-2018 IPR023346 Lysozyme-like domain RK98_RS10405 b1d082c6d4b1c966e98821b2456f680d 118 Gene3D G3DSA:3.40.30.10 1 116 4.6E-33 T 28-03-2018 RK98_RS10405 b1d082c6d4b1c966e98821b2456f680d 118 Pfam PF03960 ArsC family 8 114 3.5E-14 T 28-03-2018 IPR006660 Arsenate reductase-like RK98_RS10405 b1d082c6d4b1c966e98821b2456f680d 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 116 2.2E-46 T 28-03-2018 IPR006504 Transcriptional regulator Spx/MgsR RK98_RS10405 b1d082c6d4b1c966e98821b2456f680d 118 SUPERFAMILY SSF52833 1 116 1.53E-32 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS09320 3091abec73a6d369d1dcf0edb9167ee6 395 Gene3D G3DSA:3.90.550.10 3 393 1.6E-103 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS09320 3091abec73a6d369d1dcf0edb9167ee6 395 SUPERFAMILY SSF53448 5 393 3.64E-121 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS09320 3091abec73a6d369d1dcf0edb9167ee6 395 Pfam PF01704 UTP--glucose-1-phosphate uridylyltransferase 65 376 1.6E-41 T 28-03-2018 IPR002618 UDPGP family GO:0008152|GO:0070569 RK98_RS00415 4589a65a042f5ce0ac20f25a2ebb3805 343 Gene3D G3DSA:3.40.430.10 115 341 2.8E-54 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RK98_RS00415 4589a65a042f5ce0ac20f25a2ebb3805 343 Pfam PF01872 RibD C-terminal domain 138 313 4.3E-41 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 RK98_RS00415 4589a65a042f5ce0ac20f25a2ebb3805 343 SUPERFAMILY SSF53927 1 134 2.58E-35 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 RK98_RS00415 4589a65a042f5ce0ac20f25a2ebb3805 343 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 94 4.2E-17 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain RK98_RS00415 4589a65a042f5ce0ac20f25a2ebb3805 343 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 1 338 1.5E-90 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 RK98_RS00415 4589a65a042f5ce0ac20f25a2ebb3805 343 PIRSF PIRSF006769 1 343 3.1E-95 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 RK98_RS00415 4589a65a042f5ce0ac20f25a2ebb3805 343 Gene3D G3DSA:3.40.140.10 1 114 7.5E-27 T 28-03-2018 RK98_RS00415 4589a65a042f5ce0ac20f25a2ebb3805 343 SUPERFAMILY SSF53597 138 339 3.51E-50 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RK98_RS00415 4589a65a042f5ce0ac20f25a2ebb3805 343 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 44 82 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RK98_RS09055 8940c161c9940b6e338b1032947bcc91 269 Gene3D G3DSA:3.40.50.300 3 244 1.0E-70 T 28-03-2018 RK98_RS09055 8940c161c9940b6e338b1032947bcc91 269 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS09055 8940c161c9940b6e338b1032947bcc91 269 SMART SM00382 34 219 1.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS09055 8940c161c9940b6e338b1032947bcc91 269 SUPERFAMILY SSF52540 5 237 1.2E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09055 8940c161c9940b6e338b1032947bcc91 269 Pfam PF00005 ABC transporter 25 171 1.4E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS09055 8940c161c9940b6e338b1032947bcc91 269 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 8 260 1.5E-104 T 28-03-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 Gene3D G3DSA:3.10.20.120 100 227 1.4E-42 T 28-03-2018 RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 SUPERFAMILY SSF50203 7 107 1.26E-26 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 PRINTS PR01898 Bacterial superantigen superfamily signature 216 232 1.0E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 PRINTS PR01898 Bacterial superantigen superfamily signature 67 93 1.0E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 PRINTS PR01898 Bacterial superantigen superfamily signature 151 165 1.0E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 PRINTS PR01898 Bacterial superantigen superfamily signature 96 109 1.0E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 PRINTS PR01898 Bacterial superantigen superfamily signature 138 151 1.0E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 Gene3D G3DSA:2.40.50.110 40 99 9.1E-21 T 28-03-2018 RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 115 233 7.6E-36 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 Pfam PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain 42 105 1.1E-6 T 28-03-2018 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold GO:0009405 RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 138 161 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS00715 ed0b1cba3cb5f378febecf56a18ba242 239 SUPERFAMILY SSF54334 109 236 1.44E-44 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS05070 2b88ea9e12f9a972cd91584a0f9f3e23 509 SUPERFAMILY SSF55604 434 507 4.71E-21 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS05070 2b88ea9e12f9a972cd91584a0f9f3e23 509 Gene3D G3DSA:3.30.1360.60 432 507 6.5E-26 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS05070 2b88ea9e12f9a972cd91584a0f9f3e23 509 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 447 464 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS05070 2b88ea9e12f9a972cd91584a0f9f3e23 509 Pfam PF02378 Phosphotransferase system, EIIC 12 350 7.0E-93 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS05070 2b88ea9e12f9a972cd91584a0f9f3e23 509 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 493 1.3E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS05070 2b88ea9e12f9a972cd91584a0f9f3e23 509 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 1 507 1.9E-178 T 28-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 RK98_RS05070 2b88ea9e12f9a972cd91584a0f9f3e23 509 Pfam PF00367 phosphotransferase system, EIIB 437 469 4.1E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS04425 634255be26624fa35f77f297c8740b09 293 Gene3D G3DSA:3.30.70.100 189 283 5.5E-8 T 28-03-2018 RK98_RS04425 634255be26624fa35f77f297c8740b09 293 SUPERFAMILY SSF82689 191 286 6.41E-8 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 RK98_RS04425 634255be26624fa35f77f297c8740b09 293 SUPERFAMILY SSF50182 119 187 1.08E-12 T 28-03-2018 IPR010920 LSM domain RK98_RS04425 634255be26624fa35f77f297c8740b09 293 Pfam PF00924 Mechanosensitive ion channel 75 277 4.5E-40 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 RK98_RS04425 634255be26624fa35f77f297c8740b09 293 Gene3D G3DSA:2.30.30.60 134 188 6.2E-14 T 28-03-2018 RK98_RS04425 634255be26624fa35f77f297c8740b09 293 SUPERFAMILY SSF82861 27 117 1.7E-15 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 ProSitePatterns PS00321 recA signature. 213 221 - T 28-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 SMART SM00382 57 228 1.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 Hamap MF_00268 Protein RecA [recA]. 5 329 52.933 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 1.1E-170 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 Pfam PF00154 recA bacterial DNA recombination protein 7 268 4.6E-142 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 Gene3D G3DSA:3.30.250.10 269 326 1.2E-26 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 PRINTS PR00142 RecA protein signature 127 156 4.0E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 PRINTS PR00142 RecA protein signature 93 122 4.0E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 PRINTS PR00142 RecA protein signature 243 272 4.0E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 PRINTS PR00142 RecA protein signature 297 314 4.0E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 PRINTS PR00142 RecA protein signature 165 194 4.0E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 PRINTS PR00142 RecA protein signature 210 238 4.0E-85 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 SUPERFAMILY SSF54752 268 326 1.83E-22 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 Gene3D G3DSA:3.40.50.300 26 268 2.0E-46 T 28-03-2018 RK98_RS12845 521cd5c51bd8bb143ec7d2039270ead6 347 SUPERFAMILY SSF52540 3 267 4.63E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03380 0d2c5efa9bd3e5621e075fcbaeab0999 248 Gene3D G3DSA:3.40.1280.10 78 243 1.2E-47 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK98_RS03380 0d2c5efa9bd3e5621e075fcbaeab0999 248 SUPERFAMILY SSF55315 4 76 9.18E-16 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like RK98_RS03380 0d2c5efa9bd3e5621e075fcbaeab0999 248 Gene3D G3DSA:3.30.1330.30 2 75 1.1E-14 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like RK98_RS03380 0d2c5efa9bd3e5621e075fcbaeab0999 248 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 242 2.6E-78 T 28-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 RK98_RS03380 0d2c5efa9bd3e5621e075fcbaeab0999 248 Pfam PF00588 SpoU rRNA Methylase family 97 236 1.7E-40 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RK98_RS03380 0d2c5efa9bd3e5621e075fcbaeab0999 248 SMART SM00967 5 79 1.6E-19 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 RK98_RS03380 0d2c5efa9bd3e5621e075fcbaeab0999 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 79 3.1E-20 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 RK98_RS03380 0d2c5efa9bd3e5621e075fcbaeab0999 248 SUPERFAMILY SSF75217 67 243 2.22E-49 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 Gene3D G3DSA:3.30.572.10 2 318 6.4E-129 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 Hamap MF_00008 Thymidylate synthase [thyA]. 6 318 39.362 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 PRINTS PR00108 Thymidylate synthase family signature 170 189 2.5E-50 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 PRINTS PR00108 Thymidylate synthase family signature 214 240 2.5E-50 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 PRINTS PR00108 Thymidylate synthase family signature 47 68 2.5E-50 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 PRINTS PR00108 Thymidylate synthase family signature 252 269 2.5E-50 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 PRINTS PR00108 Thymidylate synthase family signature 196 211 2.5E-50 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 Pfam PF00303 Thymidylate synthase 8 318 3.6E-118 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 SUPERFAMILY SSF55831 6 318 8.37E-133 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 8 318 3.8E-160 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS13630 0bef27a50067167f953a0a563738ba16 318 ProSitePatterns PS00091 Thymidylate synthase active site. 181 209 - T 28-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 RK98_RS05390 3a49978cc64c2bd5e1aabca1bdd50e16 254 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 253 24.982 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RK98_RS05390 3a49978cc64c2bd5e1aabca1bdd50e16 254 TIGRFAM TIGR00761 argB: acetylglutamate kinase 3 229 2.0E-85 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RK98_RS05390 3a49978cc64c2bd5e1aabca1bdd50e16 254 Pfam PF00696 Amino acid kinase family 2 230 5.0E-40 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS05390 3a49978cc64c2bd5e1aabca1bdd50e16 254 SUPERFAMILY SSF53633 1 253 4.06E-57 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS05390 3a49978cc64c2bd5e1aabca1bdd50e16 254 Gene3D G3DSA:3.40.1160.10 1 254 4.5E-46 T 28-03-2018 RK98_RS05390 3a49978cc64c2bd5e1aabca1bdd50e16 254 PIRSF PIRSF000728 1 254 4.2E-80 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 SMART SM00490 240 321 2.3E-28 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 SUPERFAMILY SSF47819 518 591 1.07E-17 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 Pfam PF00270 DEAD/DEAH box helicase 17 178 4.8E-20 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 Gene3D G3DSA:1.10.150.80 520 592 2.1E-18 T 28-03-2018 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 Gene3D G3DSA:3.40.50.300 1 198 2.1E-35 T 28-03-2018 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 Pfam PF09382 RQC domain 400 501 1.9E-21 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 Pfam PF00271 Helicase conserved C-terminal domain 216 320 6.3E-21 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 5 452 5.8E-137 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 SUPERFAMILY SSF52540 54 341 1.03E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 SMART SM00956 403 503 7.9E-25 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 SMART SM00341 516 593 7.0E-8 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 SMART SM00487 11 204 9.3E-32 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 Gene3D G3DSA:1.10.10.10 396 516 2.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 2 589 3.5E-272 T 28-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 Pfam PF00570 HRDC domain 521 586 9.0E-17 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 SUPERFAMILY SSF46785 400 498 1.5E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 Pfam PF16124 RecQ zinc-binding 333 395 1.1E-10 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RK98_RS02390 a298052c89ccf0b694926f8a3d003b03 593 Gene3D G3DSA:3.40.50.300 200 395 4.2E-49 T 28-03-2018 RK98_RS09670 6d75e6f2ad5d6085c3706cbf44bfd7e5 375 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 362 5.5E-123 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 RK98_RS09670 6d75e6f2ad5d6085c3706cbf44bfd7e5 375 Gene3D G3DSA:3.40.50.2000 203 348 1.6E-37 T 28-03-2018 RK98_RS09670 6d75e6f2ad5d6085c3706cbf44bfd7e5 375 SUPERFAMILY SSF53756 1 369 4.49E-138 T 28-03-2018 RK98_RS09670 6d75e6f2ad5d6085c3706cbf44bfd7e5 375 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 364 1.4E-159 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 RK98_RS09670 6d75e6f2ad5d6085c3706cbf44bfd7e5 375 Gene3D G3DSA:3.40.50.2000 2 202 1.8E-80 T 28-03-2018 RK98_RS05385 af032929158e6a40331dbec50ca66c75 413 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 413 135.621 T 28-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RK98_RS05385 af032929158e6a40331dbec50ca66c75 413 Pfam PF01960 ArgJ family 29 413 1.4E-144 T 28-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RK98_RS05385 af032929158e6a40331dbec50ca66c75 413 Gene3D G3DSA:3.60.70.12 16 286 7.3E-98 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RK98_RS05385 af032929158e6a40331dbec50ca66c75 413 SUPERFAMILY SSF56266 23 409 5.23E-131 T 28-03-2018 IPR016117 ArgJ-like domain KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RK98_RS05385 af032929158e6a40331dbec50ca66c75 413 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 19 413 2.1E-149 T 28-03-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 RK98_RS05385 af032929158e6a40331dbec50ca66c75 413 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 40 413 0.0 T 28-03-2018 RK98_RS09665 55e7ca7a0ea307a0287f72e2f17b1393 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 8.6E-92 T 28-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 RK98_RS09665 55e7ca7a0ea307a0287f72e2f17b1393 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 2.9E-77 T 28-03-2018 RK98_RS09665 55e7ca7a0ea307a0287f72e2f17b1393 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.327 T 28-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 RK98_RS09665 55e7ca7a0ea307a0287f72e2f17b1393 209 SUPERFAMILY SSF53271 4 207 5.77E-73 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like RK98_RS09665 55e7ca7a0ea307a0287f72e2f17b1393 209 Gene3D G3DSA:3.40.50.2020 2 207 2.8E-66 T 28-03-2018 RK98_RS05840 cb6f8649a4a10f0395fa463668b9aa8f 1050 Gene3D G3DSA:3.40.50.300 860 1046 6.5E-20 T 28-03-2018 RK98_RS05840 cb6f8649a4a10f0395fa463668b9aa8f 1050 Pfam PF13087 AAA domain 907 1031 1.6E-11 T 28-03-2018 RK98_RS05840 cb6f8649a4a10f0395fa463668b9aa8f 1050 SUPERFAMILY SSF52540 354 383 3.7E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05840 cb6f8649a4a10f0395fa463668b9aa8f 1050 SUPERFAMILY SSF52540 740 817 3.7E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05840 cb6f8649a4a10f0395fa463668b9aa8f 1050 SUPERFAMILY SSF52540 853 1036 3.7E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05840 cb6f8649a4a10f0395fa463668b9aa8f 1050 SUPERFAMILY SSF52540 271 321 3.7E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05840 cb6f8649a4a10f0395fa463668b9aa8f 1050 Gene3D G3DSA:3.40.50.300 279 816 7.3E-22 T 28-03-2018 RK98_RS07315 613472399b13b4dd485057214d606121 226 SUPERFAMILY SSF143548 23 141 8.37E-28 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RK98_RS07315 613472399b13b4dd485057214d606121 226 Pfam PF03315 Serine dehydratase beta chain 9 79 7.0E-10 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RK98_RS07315 613472399b13b4dd485057214d606121 226 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 7 170 8.5E-51 T 28-03-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RK98_RS07315 613472399b13b4dd485057214d606121 226 Gene3D G3DSA:3.30.1330.90 17 143 8.0E-20 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RK98_RS07315 613472399b13b4dd485057214d606121 226 PIRSF PIRSF036692 5 226 7.8E-55 T 28-03-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RK98_RS09005 9362011b2855810e8cf3b4f68008cf52 59 PIRSF PIRSF002211 1 59 5.2E-29 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09005 9362011b2855810e8cf3b4f68008cf52 59 SUPERFAMILY SSF55129 1 58 4.45E-22 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RK98_RS09005 9362011b2855810e8cf3b4f68008cf52 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 6.5E-22 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RK98_RS09005 9362011b2855810e8cf3b4f68008cf52 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 2.0E-28 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09005 9362011b2855810e8cf3b4f68008cf52 59 Gene3D G3DSA:3.30.1390.20 4 58 1.2E-26 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain RK98_RS09005 9362011b2855810e8cf3b4f68008cf52 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.978 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12085 d63042e13787deaf0e5010576c670888 593 Gene3D G3DSA:3.40.1440.10 4 101 1.0E-25 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily RK98_RS12085 d63042e13787deaf0e5010576c670888 593 SMART SM00465 18 98 2.1E-24 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily RK98_RS12085 d63042e13787deaf0e5010576c670888 593 Pfam PF01541 GIY-YIG catalytic domain 19 93 2.5E-11 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily RK98_RS12085 d63042e13787deaf0e5010576c670888 593 Hamap MF_00203 UvrABC system protein C [uvrC]. 5 590 28.785 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RK98_RS12085 d63042e13787deaf0e5010576c670888 593 Gene3D G3DSA:1.10.150.20 525 593 2.3E-12 T 28-03-2018 RK98_RS12085 d63042e13787deaf0e5010576c670888 593 SUPERFAMILY SSF82771 18 100 6.67E-22 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily RK98_RS12085 d63042e13787deaf0e5010576c670888 593 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 379 526 9.1E-53 T 28-03-2018 IPR001162 UvrC family homology region RK98_RS12085 d63042e13787deaf0e5010576c670888 593 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 572 8.7E-199 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 RK98_RS12085 d63042e13787deaf0e5010576c670888 593 Pfam PF02151 UvrB/uvrC motif 200 233 1.8E-9 T 28-03-2018 IPR001943 UVR domain GO:0005515 RK98_RS12085 d63042e13787deaf0e5010576c670888 593 SUPERFAMILY SSF47781 505 592 1.11E-18 T 28-03-2018 IPR010994 RuvA domain 2-like RK98_RS12085 d63042e13787deaf0e5010576c670888 593 SUPERFAMILY SSF46600 186 238 1.96E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 RK98_RS12085 d63042e13787deaf0e5010576c670888 593 Gene3D G3DSA:4.10.860.10 179 238 2.1E-14 T 28-03-2018 IPR001943 UVR domain GO:0005515 RK98_RS13995 67615cf166ea9a8b71000d75d7835d28 180 Pfam PF04079 Segregation and condensation complex subunit ScpB 6 156 1.6E-40 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RK98_RS13995 67615cf166ea9a8b71000d75d7835d28 180 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 173 28.428 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RK98_RS13995 67615cf166ea9a8b71000d75d7835d28 180 SUPERFAMILY SSF46785 76 148 6.36E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13995 67615cf166ea9a8b71000d75d7835d28 180 Gene3D G3DSA:1.10.10.10 2 75 1.4E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13995 67615cf166ea9a8b71000d75d7835d28 180 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 177 2.6E-36 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RK98_RS13995 67615cf166ea9a8b71000d75d7835d28 180 Gene3D G3DSA:1.10.10.10 76 165 1.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13995 67615cf166ea9a8b71000d75d7835d28 180 SUPERFAMILY SSF46785 4 72 7.89E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13995 67615cf166ea9a8b71000d75d7835d28 180 PIRSF PIRSF019345 1 178 2.7E-36 T 28-03-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 RK98_RS02345 d9d07cc7fcc13f6e49a7a094d60c1754 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 18 493 2.7E-109 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 RK98_RS02345 d9d07cc7fcc13f6e49a7a094d60c1754 501 Pfam PF00854 POT family 100 464 1.2E-59 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 RK98_RS02345 d9d07cc7fcc13f6e49a7a094d60c1754 501 Gene3D G3DSA:1.20.1250.20 286 493 9.8E-15 T 28-03-2018 RK98_RS02345 d9d07cc7fcc13f6e49a7a094d60c1754 501 Gene3D G3DSA:1.20.1250.20 11 217 5.0E-20 T 28-03-2018 RK98_RS02345 d9d07cc7fcc13f6e49a7a094d60c1754 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 159 171 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 RK98_RS02345 d9d07cc7fcc13f6e49a7a094d60c1754 501 SUPERFAMILY SSF103473 277 491 2.53E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS02345 d9d07cc7fcc13f6e49a7a094d60c1754 501 SUPERFAMILY SSF103473 16 211 2.53E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 2 391 54.234 T 28-03-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 SUPERFAMILY SSF55821 2 201 4.81E-79 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 202 37.853 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 203 393 35.324 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 Pfam PF00925 GTP cyclohydrolase II 209 368 2.8E-62 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 198 2.9E-74 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 8 197 1.8E-79 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 208 393 2.3E-67 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 Gene3D G3DSA:3.90.870.10 1 211 4.1E-87 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 SUPERFAMILY SSF142695 205 371 3.01E-58 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 RK98_RS00405 c2dd11faec84deaef8f005c7f0518728 393 PIRSF PIRSF001259 1 393 8.7E-150 T 28-03-2018 RK98_RS11820 00820b1a51ee43b72fb8a33f93f90219 364 SMART SM00382 29 212 1.3E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS11820 00820b1a51ee43b72fb8a33f93f90219 364 SUPERFAMILY SSF52540 4 244 5.59E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11820 00820b1a51ee43b72fb8a33f93f90219 364 Pfam PF08402 TOBE domain 273 341 2.4E-8 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 RK98_RS11820 00820b1a51ee43b72fb8a33f93f90219 364 Gene3D G3DSA:2.40.50.100 241 290 0.48 T 28-03-2018 RK98_RS11820 00820b1a51ee43b72fb8a33f93f90219 364 Pfam PF00005 ABC transporter 20 161 5.2E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS11820 00820b1a51ee43b72fb8a33f93f90219 364 SUPERFAMILY SSF50331 237 342 2.98E-14 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal RK98_RS11820 00820b1a51ee43b72fb8a33f93f90219 364 Gene3D G3DSA:3.40.50.300 1 240 4.6E-72 T 28-03-2018 RK98_RS11820 00820b1a51ee43b72fb8a33f93f90219 364 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS06220 1fed1b6d61953e0a18555402f127e76d 233 Pfam PF00072 Response regulator receiver domain 5 114 3.0E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS06220 1fed1b6d61953e0a18555402f127e76d 233 SMART SM00862 153 229 9.3E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS06220 1fed1b6d61953e0a18555402f127e76d 233 SUPERFAMILY SSF52172 3 125 2.42E-42 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS06220 1fed1b6d61953e0a18555402f127e76d 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 9.3E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS06220 1fed1b6d61953e0a18555402f127e76d 233 Gene3D G3DSA:3.40.50.2300 2 125 1.2E-37 T 28-03-2018 RK98_RS06220 1fed1b6d61953e0a18555402f127e76d 233 SUPERFAMILY SSF46894 132 229 2.41E-30 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RK98_RS06220 1fed1b6d61953e0a18555402f127e76d 233 SMART SM00448 3 113 3.9E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS06220 1fed1b6d61953e0a18555402f127e76d 233 Gene3D G3DSA:1.10.10.10 126 233 1.0E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 Gene3D G3DSA:3.30.300.20 356 434 4.7E-35 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 129 6.0E-24 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 343 5.3E-27 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 SUPERFAMILY SSF52540 138 435 5.66E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 PIRSF PIRSF006485 2 436 5.0E-178 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 SUPERFAMILY SSF52540 4 166 6.55E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 Hamap MF_00195 GTPase Der [der]. 3 436 40.999 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 1.9E-182 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 Gene3D G3DSA:1.20.120.430 68 242 7.3E-46 T 28-03-2018 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 Gene3D G3DSA:1.20.120.430 1 67 1.5E-17 T 28-03-2018 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 Gene3D G3DSA:1.20.120.430 243 355 6.9E-15 T 28-03-2018 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 Pfam PF01926 50S ribosome-binding GTPase 178 295 6.6E-27 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 2.4E-26 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 178 198 4.9E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 248 266 4.9E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS13880 af4944d3c4ad27a1b61f771cd12eb96f 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 1.6E-32 T 28-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like RK98_RS13620 7c53a6fee9b440a4965a6e27616a23e5 279 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 6 276 7.0E-99 T 28-03-2018 IPR003797 DegV RK98_RS13620 7c53a6fee9b440a4965a6e27616a23e5 279 Pfam PF02645 Uncharacterised protein, DegV family COG1307 6 278 5.1E-85 T 28-03-2018 IPR003797 DegV RK98_RS13620 7c53a6fee9b440a4965a6e27616a23e5 279 Gene3D G3DSA:3.40.50.10170 1 151 2.4E-52 T 28-03-2018 RK98_RS13620 7c53a6fee9b440a4965a6e27616a23e5 279 SUPERFAMILY SSF82549 3 279 8.11E-91 T 28-03-2018 RK98_RS13620 7c53a6fee9b440a4965a6e27616a23e5 279 Gene3D G3DSA:3.30.1180.10 152 279 1.2E-31 T 28-03-2018 RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 SUPERFAMILY SSF53187 290 370 1.81E-59 T 28-03-2018 RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 SUPERFAMILY SSF53187 5 181 1.81E-59 T 28-03-2018 RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 108 146 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 Pfam PF01546 Peptidase family M20/M25/M40 76 367 4.4E-25 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 Gene3D G3DSA:3.40.630.10 1 376 2.4E-55 T 28-03-2018 RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 Pfam PF07687 Peptidase dimerisation domain 188 273 1.2E-12 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 PIRSF PIRSF001123 92 214 7.6E-9 T 28-03-2018 IPR008007 Peptidase M42 RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 PIRSF PIRSF001123 259 376 0.0042 T 28-03-2018 IPR008007 Peptidase M42 RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 PIRSF PIRSF001123 4 100 0.0099 T 28-03-2018 IPR008007 Peptidase M42 RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 SUPERFAMILY SSF55031 185 290 1.22E-19 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RK98_RS14090 b7d077efe84a88f530221dcc6ed0d9d0 377 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 369 5.4E-122 T 28-03-2018 IPR010162 Peptidase M20B, peptidase T-like RK98_RS02905 84a71f44fb2cb287cc352823128bef62 186 Gene3D G3DSA:1.10.443.10 9 180 1.1E-23 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS02905 84a71f44fb2cb287cc352823128bef62 186 Pfam PF00589 Phage integrase family 11 166 2.2E-21 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS02905 84a71f44fb2cb287cc352823128bef62 186 SUPERFAMILY SSF56349 10 174 2.65E-28 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 Gene3D G3DSA:3.40.50.300 5 356 2.8E-43 T 28-03-2018 RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 5 467 41.975 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 SMART SM01086 359 455 9.4E-24 T 28-03-2018 IPR019489 Clp ATPase, C-terminal RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 359 433 1.6E-7 T 28-03-2018 IPR019489 Clp ATPase, C-terminal RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 8 467 1.6E-186 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 SUPERFAMILY SSF52540 209 462 1.94E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 SUPERFAMILY SSF52540 8 143 1.94E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 57 109 9.0E-6 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 Gene3D G3DSA:1.10.8.60 359 455 8.8E-30 T 28-03-2018 RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 Pfam PF07724 AAA domain (Cdc48 subfamily) 220 353 1.6E-35 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS12670 cdb6e1d93b3296e8f794ad7caecaa336 467 SMART SM00382 53 356 3.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS08510 b36a47edfb5edf7082ee684a089eb860 254 SUPERFAMILY SSF53697 83 243 2.91E-23 T 28-03-2018 RK98_RS08510 b36a47edfb5edf7082ee684a089eb860 254 Pfam PF01380 SIS domain 112 219 1.8E-16 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 RK98_RS08510 b36a47edfb5edf7082ee684a089eb860 254 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 73 1.3E-17 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RK98_RS08510 b36a47edfb5edf7082ee684a089eb860 254 SUPERFAMILY SSF46689 3 74 5.02E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS08510 b36a47edfb5edf7082ee684a089eb860 254 Gene3D G3DSA:1.10.10.10 3 73 1.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08510 b36a47edfb5edf7082ee684a089eb860 254 Gene3D G3DSA:3.40.50.10490 74 250 6.1E-23 T 28-03-2018 RK98_RS05940 945373dd79b892b8a2f27278204fd1be 298 Pfam PF06048 Domain of unknown function (DUF927) 11 297 9.0E-73 T 28-03-2018 IPR009270 Domain of unknown function DUF927 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 Pfam PF13365 Trypsin-like peptidase domain 125 269 5.2E-31 T 28-03-2018 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 SUPERFAMILY SSF50494 85 303 5.53E-54 T 28-03-2018 IPR009003 Peptidase S1, PA clan RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 Gene3D G3DSA:2.40.10.10 81 194 2.8E-29 T 28-03-2018 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 PRINTS PR00834 HtrA/DegQ protease family signature 158 178 1.7E-35 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 PRINTS PR00834 HtrA/DegQ protease family signature 240 257 1.7E-35 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 PRINTS PR00834 HtrA/DegQ protease family signature 137 149 1.7E-35 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 PRINTS PR00834 HtrA/DegQ protease family signature 345 357 1.7E-35 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 PRINTS PR00834 HtrA/DegQ protease family signature 199 223 1.7E-35 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 PRINTS PR00834 HtrA/DegQ protease family signature 262 279 1.7E-35 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 Gene3D G3DSA:2.30.42.10 305 411 9.8E-20 T 28-03-2018 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 Pfam PF13180 PDZ domain 308 397 1.3E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 SUPERFAMILY SSF50156 281 400 7.72E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 Gene3D G3DSA:2.40.10.10 195 301 6.9E-34 T 28-03-2018 RK98_RS00190 debd1e4f3230f7b483be2c3a45b7ba29 424 SMART SM00228 307 388 0.0037 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS14420 deedc0d248550f1061f2f35fa4579d92 250 Gene3D G3DSA:3.40.1280.10 1 249 1.1E-69 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK98_RS14420 deedc0d248550f1061f2f35fa4579d92 250 Pfam PF04452 RNA methyltransferase 18 244 3.3E-73 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS14420 deedc0d248550f1061f2f35fa4579d92 250 PIRSF PIRSF015601 1 249 1.0E-60 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS14420 deedc0d248550f1061f2f35fa4579d92 250 SUPERFAMILY SSF88697 2 69 2.98E-14 T 28-03-2018 IPR015947 PUA-like domain RK98_RS14420 deedc0d248550f1061f2f35fa4579d92 250 SUPERFAMILY SSF75217 73 247 2.31E-51 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases RK98_RS14420 deedc0d248550f1061f2f35fa4579d92 250 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 7 247 7.0E-61 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS12805 0051d696b36ba9c3e44963bbd24bf3c6 237 SMART SM00866 91 230 2.0E-13 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RK98_RS12805 0051d696b36ba9c3e44963bbd24bf3c6 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 68 7.0E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS12805 0051d696b36ba9c3e44963bbd24bf3c6 237 SUPERFAMILY SSF46785 2 79 2.53E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS12805 0051d696b36ba9c3e44963bbd24bf3c6 237 SUPERFAMILY SSF64288 66 235 4.71E-29 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RK98_RS12805 0051d696b36ba9c3e44963bbd24bf3c6 237 Gene3D G3DSA:3.40.1410.10 77 235 1.3E-22 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RK98_RS12805 0051d696b36ba9c3e44963bbd24bf3c6 237 Pfam PF07702 UTRA domain 92 226 1.3E-26 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RK98_RS12805 0051d696b36ba9c3e44963bbd24bf3c6 237 Gene3D G3DSA:1.10.10.10 2 71 1.8E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS00520 36e710f809910fd12f907c594233b326 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 25.782 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor RK98_RS00520 36e710f809910fd12f907c594233b326 85 SMART SM01234 1 68 3.1E-48 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor RK98_RS00520 36e710f809910fd12f907c594233b326 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 77 2.3E-32 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor RK98_RS00520 36e710f809910fd12f907c594233b326 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 2.0E-25 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor RK98_RS00520 36e710f809910fd12f907c594233b326 85 Pfam PF01809 Haemolytic domain 2 68 2.5E-31 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor RK98_RS13255 99a66242c33e61fded21a7fc1535b766 486 TIGRFAM TIGR00835 agcS: amino acid carrier protein 24 449 3.6E-153 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS13255 99a66242c33e61fded21a7fc1535b766 486 PRINTS PR00175 Sodium/alanine symporter signature 311 329 1.5E-59 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS13255 99a66242c33e61fded21a7fc1535b766 486 PRINTS PR00175 Sodium/alanine symporter signature 220 239 1.5E-59 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS13255 99a66242c33e61fded21a7fc1535b766 486 PRINTS PR00175 Sodium/alanine symporter signature 358 380 1.5E-59 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS13255 99a66242c33e61fded21a7fc1535b766 486 PRINTS PR00175 Sodium/alanine symporter signature 418 438 1.5E-59 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS13255 99a66242c33e61fded21a7fc1535b766 486 PRINTS PR00175 Sodium/alanine symporter signature 101 123 1.5E-59 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS13255 99a66242c33e61fded21a7fc1535b766 486 PRINTS PR00175 Sodium/alanine symporter signature 192 210 1.5E-59 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS13255 99a66242c33e61fded21a7fc1535b766 486 Pfam PF01235 Sodium:alanine symporter family 66 461 2.5E-163 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS13255 99a66242c33e61fded21a7fc1535b766 486 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 101 116 - T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS05360 4d29f7a9b09a284e35648b7c36369bfb 546 PIRSF PIRSF036565 1 546 2.6E-207 T 28-03-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 RK98_RS05360 4d29f7a9b09a284e35648b7c36369bfb 546 Gene3D G3DSA:3.40.50.970 1 191 4.2E-44 T 28-03-2018 RK98_RS05360 4d29f7a9b09a284e35648b7c36369bfb 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 512 7.5E-16 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RK98_RS05360 4d29f7a9b09a284e35648b7c36369bfb 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 176 1.2E-33 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RK98_RS05360 4d29f7a9b09a284e35648b7c36369bfb 546 Gene3D G3DSA:3.40.50.1220 192 328 2.8E-23 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS05360 4d29f7a9b09a284e35648b7c36369bfb 546 SUPERFAMILY SSF52518 4 181 6.87E-41 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS05360 4d29f7a9b09a284e35648b7c36369bfb 546 SUPERFAMILY SSF52518 353 536 2.21E-44 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS05360 4d29f7a9b09a284e35648b7c36369bfb 546 SUPERFAMILY SSF52467 165 329 4.15E-32 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS05360 4d29f7a9b09a284e35648b7c36369bfb 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 317 1.4E-23 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RK98_RS05360 4d29f7a9b09a284e35648b7c36369bfb 546 Gene3D G3DSA:3.40.50.970 329 538 1.7E-34 T 28-03-2018 RK98_RS00435 42023a1c992100fa8bdb68900b08f456 284 Gene3D G3DSA:1.10.530.10 123 265 7.3E-24 T 28-03-2018 RK98_RS00435 42023a1c992100fa8bdb68900b08f456 284 SMART SM00047 113 271 2.0E-33 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RK98_RS00435 42023a1c992100fa8bdb68900b08f456 284 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 133 260 1.7E-12 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RK98_RS06645 2484faf31c4a7903754711beebabd623 522 Gene3D G3DSA:3.40.50.1820 236 493 4.3E-4 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS06645 2484faf31c4a7903754711beebabd623 522 TIGRFAM TIGR03712 acc_sec_asp2: accessory Sec system protein Asp2 6 514 7.3E-242 T 28-03-2018 IPR022267 Accessory Sec system protein Asp2 GO:0015031 RK98_RS06645 2484faf31c4a7903754711beebabd623 522 Pfam PF16929 Accessory Sec system GspB-transporter 5 513 3.2E-215 T 28-03-2018 IPR022267 Accessory Sec system protein Asp2 GO:0015031 RK98_RS06645 2484faf31c4a7903754711beebabd623 522 SUPERFAMILY SSF53474 279 404 1.02E-6 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS14400 b2754e4fe34691ddaa8e3bf62b5b4b4d 329 Hamap MF_01562 UPF0365 protein . 1 321 47.194 T 28-03-2018 IPR022853 Uncharacterised protein family YdfA-immunity RK98_RS14400 b2754e4fe34691ddaa8e3bf62b5b4b4d 329 Pfam PF12127 SigmaW regulon antibacterial 7 318 8.0E-161 T 28-03-2018 IPR022853 Uncharacterised protein family YdfA-immunity RK98_RS14400 b2754e4fe34691ddaa8e3bf62b5b4b4d 329 Gene3D G3DSA:1.10.287.40 188 288 0.0011 T 28-03-2018 RK98_RS11185 aa9deab97cef51e6d5c5b19711302381 373 Gene3D G3DSA:1.20.1250.20 194 373 2.8E-7 T 28-03-2018 RK98_RS11185 aa9deab97cef51e6d5c5b19711302381 373 SUPERFAMILY SSF103473 17 367 4.19E-19 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS11185 aa9deab97cef51e6d5c5b19711302381 373 Gene3D G3DSA:1.20.1250.20 2 186 3.7E-7 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 171 6.8E-49 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 Gene3D G3DSA:3.40.50.300 68 247 2.0E-28 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 Gene3D G3DSA:2.40.30.10 248 338 8.3E-13 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 267 293 6.5E-79 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 455 469 6.5E-79 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 504 521 6.5E-79 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 213 235 6.5E-79 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 109 132 6.5E-79 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 470 492 6.5E-79 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 SMART SM00889 417 532 9.9E-15 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 Gene3D G3DSA:3.40.50.300 1 67 1.9E-9 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 Pfam PF00009 Elongation factor Tu GTP binding domain 2 237 1.0E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 SUPERFAMILY SSF54980 342 418 5.4E-16 T 28-03-2018 IPR035647 EF-G domain III/V-like RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 Gene3D G3DSA:3.30.230.10 433 542 3.7E-18 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 Pfam PF00679 Elongation factor G C-terminus 534 617 2.2E-15 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 SUPERFAMILY SSF52540 2 236 1.33E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR00315 GTP-binding elongation factor signature 5 18 1.2E-17 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR00315 GTP-binding elongation factor signature 123 132 1.2E-17 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR00315 GTP-binding elongation factor signature 87 98 1.2E-17 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR00315 GTP-binding elongation factor signature 51 59 1.2E-17 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 PRINTS PR00315 GTP-binding elongation factor signature 71 81 1.2E-17 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 SUPERFAMILY SSF54211 416 532 4.55E-22 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 SUPERFAMILY SSF50447 224 317 1.41E-14 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 Gene3D G3DSA:3.30.70.240 543 620 1.2E-10 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 Gene3D G3DSA:3.30.70.870 339 432 9.5E-18 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 Pfam PF03764 Elongation factor G, domain IV 416 531 9.2E-24 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 Pfam PF14492 Elongation Factor G, domain II 342 414 2.5E-13 T 28-03-2018 RK98_RS04215 15e9b0b26f9c10dd61901b1716048760 639 SUPERFAMILY SSF54980 535 618 7.67E-15 T 28-03-2018 IPR035647 EF-G domain III/V-like RK98_RS06095 889eefcf854f749879ac398388c7fa31 101 Pfam PF00581 Rhodanese-like domain 19 94 1.9E-14 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06095 889eefcf854f749879ac398388c7fa31 101 Gene3D G3DSA:3.40.250.10 2 97 1.6E-22 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06095 889eefcf854f749879ac398388c7fa31 101 SMART SM00450 7 101 5.7E-15 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06095 889eefcf854f749879ac398388c7fa31 101 SUPERFAMILY SSF52821 15 95 3.01E-25 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS00225 8b998bbb07f966e919efd14fa71b0c13 568 SUPERFAMILY SSF56801 17 558 3.92E-161 T 28-03-2018 RK98_RS00225 8b998bbb07f966e919efd14fa71b0c13 568 Gene3D G3DSA:3.40.50.980 215 369 2.2E-44 T 28-03-2018 RK98_RS00225 8b998bbb07f966e919efd14fa71b0c13 568 Gene3D G3DSA:3.30.300.30 455 566 2.3E-25 T 28-03-2018 RK98_RS00225 8b998bbb07f966e919efd14fa71b0c13 568 Gene3D G3DSA:2.30.38.10 370 452 3.3E-19 T 28-03-2018 RK98_RS00225 8b998bbb07f966e919efd14fa71b0c13 568 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 546 2.9E-23 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain RK98_RS00225 8b998bbb07f966e919efd14fa71b0c13 568 Gene3D G3DSA:3.40.50.980 40 214 9.1E-40 T 28-03-2018 RK98_RS00225 8b998bbb07f966e919efd14fa71b0c13 568 Pfam PF00501 AMP-binding enzyme 54 458 7.0E-95 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RK98_RS00225 8b998bbb07f966e919efd14fa71b0c13 568 ProSitePatterns PS00455 Putative AMP-binding domain signature. 209 220 - T 28-03-2018 IPR020845 AMP-binding, conserved site RK98_RS02900 dd8f529f4323d1d5ad32ce02b24db2ac 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 1.5E-40 T 28-03-2018 RK98_RS02900 dd8f529f4323d1d5ad32ce02b24db2ac 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 1.5E-40 T 28-03-2018 RK98_RS02900 dd8f529f4323d1d5ad32ce02b24db2ac 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 1.5E-40 T 28-03-2018 RK98_RS02900 dd8f529f4323d1d5ad32ce02b24db2ac 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.5E-40 T 28-03-2018 RK98_RS02900 dd8f529f4323d1d5ad32ce02b24db2ac 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 1.5E-40 T 28-03-2018 RK98_RS02900 dd8f529f4323d1d5ad32ce02b24db2ac 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 1.5E-40 T 28-03-2018 RK98_RS02900 dd8f529f4323d1d5ad32ce02b24db2ac 800 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 116 1.1E-10 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS02900 dd8f529f4323d1d5ad32ce02b24db2ac 800 Pfam PF00361 Proton-conducting membrane transporter 129 426 5.3E-66 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS02900 dd8f529f4323d1d5ad32ce02b24db2ac 800 Pfam PF13244 Domain of unknown function (DUF4040) 637 699 6.9E-19 T 28-03-2018 IPR025383 Domain of unknown function DUF4040 RK98_RS03605 684c0418e039d05fbb8427fd7f65a251 190 Gene3D G3DSA:3.40.50.1470 1 189 3.1E-71 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RK98_RS03605 684c0418e039d05fbb8427fd7f65a251 190 SUPERFAMILY SSF53178 1 186 3.14E-66 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RK98_RS03605 684c0418e039d05fbb8427fd7f65a251 190 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RK98_RS03605 684c0418e039d05fbb8427fd7f65a251 190 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 36.776 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RK98_RS03605 684c0418e039d05fbb8427fd7f65a251 190 Pfam PF01195 Peptidyl-tRNA hydrolase 4 186 5.8E-57 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RK98_RS03605 684c0418e039d05fbb8427fd7f65a251 190 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 RK98_RS03605 684c0418e039d05fbb8427fd7f65a251 190 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 186 3.5E-64 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 Hamap MF_00900 GTPase HflX [hflX]. 35 394 43.396 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 Pfam PF01926 50S ribosome-binding GTPase 207 326 3.9E-18 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 Gene3D G3DSA:3.40.50.300 174 239 6.1E-12 T 28-03-2018 RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 Gene3D G3DSA:3.40.50.300 240 383 8.9E-16 T 28-03-2018 RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 PIRSF PIRSF006809 6 412 4.4E-145 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 15 353 1.4E-140 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 208 228 7.6E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 275 293 7.6E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 SUPERFAMILY SSF52540 206 351 2.01E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 Pfam PF16360 GTP-binding GTPase Middle Region 122 200 1.3E-31 T 28-03-2018 IPR032305 GTP-binding protein, middle domain RK98_RS12945 9898bfc0431e5de02844462fdcd0ef29 412 Pfam PF13167 GTP-binding GTPase N-terminal 33 120 3.7E-31 T 28-03-2018 IPR025121 GTPase HflX, N-terminal RK98_RS07710 9c105fea3b5612555d3a51fdcbde8867 397 Gene3D G3DSA:1.20.1250.20 3 195 4.0E-25 T 28-03-2018 RK98_RS07710 9c105fea3b5612555d3a51fdcbde8867 397 Gene3D G3DSA:1.20.1250.20 198 396 1.5E-16 T 28-03-2018 RK98_RS07710 9c105fea3b5612555d3a51fdcbde8867 397 SUPERFAMILY SSF103473 8 393 5.23E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS07710 9c105fea3b5612555d3a51fdcbde8867 397 Pfam PF07690 Major Facilitator Superfamily 13 331 1.8E-31 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS05410 3e36ce46bee95351cd9436849c66e363 416 Pfam PF07690 Major Facilitator Superfamily 13 369 7.6E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS05410 3e36ce46bee95351cd9436849c66e363 416 SUPERFAMILY SSF103473 11 406 5.75E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS05410 3e36ce46bee95351cd9436849c66e363 416 Gene3D G3DSA:1.20.1250.20 7 198 1.1E-19 T 28-03-2018 RK98_RS05410 3e36ce46bee95351cd9436849c66e363 416 Gene3D G3DSA:1.20.1250.20 212 409 2.7E-12 T 28-03-2018 RK98_RS08215 ad828ea8be9a5e4abf54fd9529b71bf9 480 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 4.6E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS08215 ad828ea8be9a5e4abf54fd9529b71bf9 480 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS08215 ad828ea8be9a5e4abf54fd9529b71bf9 480 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 468 4.6E-204 T 28-03-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 RK98_RS08215 ad828ea8be9a5e4abf54fd9529b71bf9 480 Pfam PF02378 Phosphotransferase system, EIIC 110 412 1.8E-60 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS08215 ad828ea8be9a5e4abf54fd9529b71bf9 480 Pfam PF00367 phosphotransferase system, EIIB 9 41 1.2E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS08215 ad828ea8be9a5e4abf54fd9529b71bf9 480 SUPERFAMILY SSF55604 6 81 2.88E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS08215 ad828ea8be9a5e4abf54fd9529b71bf9 480 Gene3D G3DSA:3.30.1360.60 4 81 6.7E-26 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 36 53 9.6E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 16 34 9.6E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 165 187 9.6E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 190 206 9.6E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 216 229 9.6E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 44 126 7.9E-29 T 28-03-2018 IPR015282 Staphylococcal superantigen-like OB-fold domain RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 157 180 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 SUPERFAMILY SSF50203 37 126 2.93E-26 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 Gene3D G3DSA:3.10.20.120 120 228 4.9E-33 T 28-03-2018 RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 149 210 2.4E-9 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 Gene3D G3DSA:2.40.50.110 53 119 7.1E-23 T 28-03-2018 RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 3.4E-27 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01800 Staphylococcus aureus exotoxin signature 117 128 3.4E-27 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01800 Staphylococcus aureus exotoxin signature 156 172 3.4E-27 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01800 Staphylococcus aureus exotoxin signature 196 211 3.4E-27 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01898 Bacterial superantigen superfamily signature 170 184 5.0E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01898 Bacterial superantigen superfamily signature 211 227 5.0E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01898 Bacterial superantigen superfamily signature 157 170 5.0E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 PRINTS PR01898 Bacterial superantigen superfamily signature 115 128 5.0E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04045 37c212bbba46bf5af667c05b29edc806 231 SUPERFAMILY SSF54334 133 228 1.96E-27 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS08985 fb3ff51af8f6bc03ba52e0911f4e1ced 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.901 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08985 fb3ff51af8f6bc03ba52e0911f4e1ced 132 Gene3D G3DSA:3.30.1490.10 76 131 6.4E-23 T 28-03-2018 RK98_RS08985 fb3ff51af8f6bc03ba52e0911f4e1ced 132 Pfam PF00410 Ribosomal protein S8 5 132 9.1E-54 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08985 fb3ff51af8f6bc03ba52e0911f4e1ced 132 Gene3D G3DSA:3.30.1370.30 1 67 4.3E-26 T 28-03-2018 RK98_RS08985 fb3ff51af8f6bc03ba52e0911f4e1ced 132 SUPERFAMILY SSF56047 3 132 4.45E-48 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08985 fb3ff51af8f6bc03ba52e0911f4e1ced 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 SUPERFAMILY SSF51230 1067 1146 1.22E-22 T 28-03-2018 IPR011053 Single hybrid motif RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 112 1.6E-42 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Gene3D G3DSA:3.20.20.70 531 833 4.1E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Gene3D G3DSA:1.10.10.60 945 991 4.5E-20 T 28-03-2018 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Pfam PF00682 HMGL-like 533 806 1.5E-26 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Gene3D G3DSA:3.40.50.20 3 126 1.0E-49 T 28-03-2018 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Pfam PF02785 Biotin carboxylase C-terminal domain 344 452 1.0E-31 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 SMART SM00878 344 451 2.0E-49 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Gene3D G3DSA:2.40.50.100 1072 1149 1.3E-20 T 28-03-2018 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 6 1146 0.0 T 28-03-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 SUPERFAMILY SSF52440 2 115 7.19E-45 T 28-03-2018 IPR016185 Pre-ATP-grasp domain RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 323 4.0E-77 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 SUPERFAMILY SSF89000 834 1011 1.26E-55 T 28-03-2018 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Pfam PF02436 Conserved carboxylase domain 829 1029 2.8E-73 T 28-03-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 SUPERFAMILY SSF56059 86 354 3.18E-68 T 28-03-2018 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Gene3D G3DSA:3.30.1490.20 127 212 3.0E-21 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 PIRSF PIRSF001594 1 1147 0.0 T 28-03-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Gene3D G3DSA:3.30.470.20 213 453 3.5E-92 T 28-03-2018 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 SUPERFAMILY SSF51569 525 837 3.91E-81 T 28-03-2018 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Gene3D G3DSA:3.10.600.10 992 1062 8.0E-20 T 28-03-2018 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 SUPERFAMILY SSF51246 340 457 4.87E-38 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Gene3D G3DSA:3.10.600.10 463 530 1.9E-16 T 28-03-2018 RK98_RS11895 2ba744d2bccebfe1f4bed385bc9b6737 1150 Pfam PF00364 Biotin-requiring enzyme 1081 1145 4.9E-19 T 28-03-2018 IPR000089 Biotin/lipoyl attachment RK98_RS13800 47b61838e4a9eb6d72836bb15932c61f 105 SUPERFAMILY SSF101386 3 102 1.45E-26 T 28-03-2018 RK98_RS13800 47b61838e4a9eb6d72836bb15932c61f 105 PIRSF PIRSF029904 1 105 6.7E-51 T 28-03-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD RK98_RS13800 47b61838e4a9eb6d72836bb15932c61f 105 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 23 102 7.6E-22 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RK98_RS13800 47b61838e4a9eb6d72836bb15932c61f 105 Gene3D G3DSA:1.10.3420.10 1 105 1.0E-27 T 28-03-2018 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 Gene3D G3DSA:3.30.470.20 206 351 3.7E-40 T 28-03-2018 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 341 5.8E-111 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 PIRSF PIRSF039102 1 350 3.0E-115 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 342 41.799 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 96 107 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 SUPERFAMILY SSF52440 3 128 9.59E-35 T 28-03-2018 IPR016185 Pre-ATP-grasp domain RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 Pfam PF07478 D-ala D-ala ligase C-terminus 136 339 6.5E-77 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 Pfam PF01820 D-ala D-ala ligase N-terminus 5 118 1.7E-31 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 Gene3D G3DSA:3.30.1490.20 145 205 7.0E-19 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 SUPERFAMILY SSF56059 129 345 3.72E-58 T 28-03-2018 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 Gene3D G3DSA:3.40.50.20 1 139 4.2E-43 T 28-03-2018 RK98_RS09825 baf3903de1e523b86c3394d9a7ea9029 356 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 284 312 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 665 27.623 T 28-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 SUPERFAMILY SSF118116 479 667 9.94E-54 T 28-03-2018 RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 1.1E-101 T 28-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 119 1.8E-12 T 28-03-2018 RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 SMART SM01340 208 326 2.9E-55 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 SMART SM00853 483 625 5.2E-49 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 Pfam PF08676 MutL C terminal dimerisation domain 483 625 5.3E-46 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 28-03-2018 IPR014762 DNA mismatch repair, conserved site RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 8.1E-38 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 SUPERFAMILY SSF54211 190 326 1.52E-37 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 SUPERFAMILY SSF55874 3 213 1.96E-50 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 Gene3D G3DSA:3.30.230.10 213 325 5.3E-31 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS12900 7aeb283fe4300dd8dea18e920c348f7d 669 Gene3D G3DSA:3.30.565.10 2 212 2.8E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 SUPERFAMILY SSF46785 3 70 9.73E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 Gene3D G3DSA:2.10.109.10 89 207 6.9E-27 T 28-03-2018 RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 Gene3D G3DSA:1.10.10.10 2 68 6.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 Pfam PF01726 LexA DNA binding domain 1 65 6.6E-28 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 SUPERFAMILY SSF51306 83 205 1.53E-36 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 4.8E-75 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 133 144 5.9E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 174 5.9E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 132 5.9E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 Hamap MF_00015 LexA repressor [lexA]. 3 207 35.87 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 RK98_RS13150 336b5f5746b05260b5da2da3c415174e 207 Pfam PF00717 Peptidase S24-like 126 193 2.2E-17 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C RK98_RS09155 07894444d776776af6eebc845821f3f5 809 SUPERFAMILY SSF48230 47 435 3.97E-113 T 28-03-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 RK98_RS09155 07894444d776776af6eebc845821f3f5 809 Gene3D G3DSA:2.70.98.10 442 707 1.7E-75 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 RK98_RS09155 07894444d776776af6eebc845821f3f5 809 SUPERFAMILY SSF49863 707 788 1.0E-24 T 28-03-2018 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 RK98_RS09155 07894444d776776af6eebc845821f3f5 809 Gene3D G3DSA:2.60.220.10 708 776 5.2E-14 T 28-03-2018 RK98_RS09155 07894444d776776af6eebc845821f3f5 809 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 708 776 1.9E-9 T 28-03-2018 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 RK98_RS09155 07894444d776776af6eebc845821f3f5 809 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 56 402 7.6E-91 T 28-03-2018 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical RK98_RS09155 07894444d776776af6eebc845821f3f5 809 Gene3D G3DSA:1.50.10.100 46 441 5.3E-107 T 28-03-2018 RK98_RS09155 07894444d776776af6eebc845821f3f5 809 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 444 695 2.8E-70 T 28-03-2018 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 RK98_RS09155 07894444d776776af6eebc845821f3f5 809 SUPERFAMILY SSF74650 440 713 4.6E-86 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RK98_RS11370 fff8e94d138edd395fbb08f67c0b5bd0 391 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 228 344 6.0E-10 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 RK98_RS11370 fff8e94d138edd395fbb08f67c0b5bd0 391 Gene3D G3DSA:3.40.50.2000 1 181 1.3E-8 T 28-03-2018 RK98_RS11370 fff8e94d138edd395fbb08f67c0b5bd0 391 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 19 179 9.8E-48 T 28-03-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 RK98_RS11370 fff8e94d138edd395fbb08f67c0b5bd0 391 SUPERFAMILY SSF53756 6 369 4.59E-42 T 28-03-2018 RK98_RS11370 fff8e94d138edd395fbb08f67c0b5bd0 391 Hamap MF_01280 Processive diacylglycerol beta-glucosyltransferase [ugtP]. 2 388 55.962 T 28-03-2018 IPR023589 Processive diacylglycerol beta-glucosyltransferase GO:0047228 KEGG: 00561+2.4.1.315|MetaCyc: PWY-6778|MetaCyc: PWY-7817 RK98_RS11370 fff8e94d138edd395fbb08f67c0b5bd0 391 Gene3D G3DSA:3.40.50.2000 182 363 3.6E-20 T 28-03-2018 RK98_RS11735 143b36ee367c590667c37b9e7c63d7ce 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site RK98_RS11735 143b36ee367c590667c37b9e7c63d7ce 88 Gene3D G3DSA:3.30.1340.10 1 88 8.9E-33 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like RK98_RS11735 143b36ee367c590667c37b9e7c63d7ce 88 SUPERFAMILY SSF55594 1 83 2.09E-28 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like RK98_RS11735 143b36ee367c590667c37b9e7c63d7ce 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.8E-26 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like RK98_RS11735 143b36ee367c590667c37b9e7c63d7ce 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.8E-26 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like RK98_RS11735 143b36ee367c590667c37b9e7c63d7ce 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.8E-26 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like RK98_RS11735 143b36ee367c590667c37b9e7c63d7ce 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site RK98_RS11735 143b36ee367c590667c37b9e7c63d7ce 88 Pfam PF00381 PTS HPr component phosphorylation site 4 82 3.6E-30 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like RK98_RS11735 143b36ee367c590667c37b9e7c63d7ce 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 6.3E-34 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like RK98_RS03570 ccb55f18ae0a99d55e39e4e75530f89a 431 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 13 199 1.0E-58 T 28-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RK98_RS03570 ccb55f18ae0a99d55e39e4e75530f89a 431 Pfam PF01171 PP-loop family 13 195 3.9E-59 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 RK98_RS03570 ccb55f18ae0a99d55e39e4e75530f89a 431 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 358 403 1.5E-20 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RK98_RS03570 ccb55f18ae0a99d55e39e4e75530f89a 431 Pfam PF11734 TilS substrate C-terminal domain 358 418 1.9E-13 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RK98_RS03570 ccb55f18ae0a99d55e39e4e75530f89a 431 Gene3D G3DSA:3.40.50.620 10 250 1.2E-40 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS03570 ccb55f18ae0a99d55e39e4e75530f89a 431 SUPERFAMILY SSF56037 330 418 1.65E-19 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RK98_RS03570 ccb55f18ae0a99d55e39e4e75530f89a 431 SUPERFAMILY SSF52402 11 227 5.95E-50 T 28-03-2018 RK98_RS03570 ccb55f18ae0a99d55e39e4e75530f89a 431 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 309 21.86 T 28-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RK98_RS03570 ccb55f18ae0a99d55e39e4e75530f89a 431 SMART SM00977 358 425 2.0E-21 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 RK98_RS10935 ab23af8dd586259464b9ab0f7df801cc 259 Gene3D G3DSA:3.40.50.1000 1 259 1.5E-31 T 28-03-2018 IPR023214 HAD-like domain RK98_RS10935 ab23af8dd586259464b9ab0f7df801cc 259 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 252 5.1E-99 T 28-03-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 RK98_RS10935 ab23af8dd586259464b9ab0f7df801cc 259 Pfam PF13242 HAD-hyrolase-like 180 253 4.0E-18 T 28-03-2018 RK98_RS10935 ab23af8dd586259464b9ab0f7df801cc 259 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 106 5.9E-25 T 28-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RK98_RS10935 ab23af8dd586259464b9ab0f7df801cc 259 PIRSF PIRSF000915 1 259 1.4E-55 T 28-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RK98_RS10935 ab23af8dd586259464b9ab0f7df801cc 259 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 229 6.6E-39 T 28-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA RK98_RS10935 ab23af8dd586259464b9ab0f7df801cc 259 SUPERFAMILY SSF56784 3 253 2.71E-67 T 28-03-2018 IPR023214 HAD-like domain RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 Gene3D G3DSA:3.30.565.10 295 451 1.5E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 SUPERFAMILY SSF158472 179 229 6.8E-6 T 28-03-2018 RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 345 449 1.1E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 SMART SM00387 343 451 9.9E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 297 1.1E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 SUPERFAMILY SSF47384 215 298 1.96E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 Gene3D G3DSA:1.10.287.130 222 294 2.6E-15 T 28-03-2018 RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 SMART SM00388 232 299 4.2E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 SUPERFAMILY SSF55874 289 451 1.83E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 2.8E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 2.8E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 2.8E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS13560 84b3029c7830bc1fa7aa3a16e103d83f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 451 2.8E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS11235 8d58babe4de2c8879ccb205afdb8a0ba 313 Gene3D G3DSA:3.40.50.300 4 312 1.8E-78 T 28-03-2018 RK98_RS11235 8d58babe4de2c8879ccb205afdb8a0ba 313 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS11235 8d58babe4de2c8879ccb205afdb8a0ba 313 SMART SM00382 37 239 1.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS11235 8d58babe4de2c8879ccb205afdb8a0ba 313 Pfam PF00005 ABC transporter 29 181 3.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS11235 8d58babe4de2c8879ccb205afdb8a0ba 313 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 266 2.6E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RK98_RS11235 8d58babe4de2c8879ccb205afdb8a0ba 313 SUPERFAMILY SSF52540 7 253 3.04E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS01400 9c170c15a538f13bb73b3319c68d7881 264 Pfam PF01842 ACT domain 193 238 2.5E-6 T 28-03-2018 IPR002912 ACT domain RK98_RS01400 9c170c15a538f13bb73b3319c68d7881 264 SUPERFAMILY SSF55021 170 263 2.8E-18 T 28-03-2018 RK98_RS01400 9c170c15a538f13bb73b3319c68d7881 264 Gene3D G3DSA:3.30.70.260 177 264 2.0E-15 T 28-03-2018 RK98_RS01400 9c170c15a538f13bb73b3319c68d7881 264 Gene3D G3DSA:3.40.190.10 1 89 1.3E-23 T 28-03-2018 RK98_RS01400 9c170c15a538f13bb73b3319c68d7881 264 Pfam PF00800 Prephenate dehydratase 4 177 8.6E-42 T 28-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 RK98_RS01400 9c170c15a538f13bb73b3319c68d7881 264 Gene3D G3DSA:3.40.190.10 90 164 5.0E-12 T 28-03-2018 RK98_RS01400 9c170c15a538f13bb73b3319c68d7881 264 SUPERFAMILY SSF53850 1 179 3.26E-50 T 28-03-2018 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 SUPERFAMILY SSF52540 160 337 8.26E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 1.0E-33 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 1.0E-33 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 1.0E-33 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 1.0E-33 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 SUPERFAMILY SSF102741 358 430 2.35E-23 T 28-03-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 Pfam PF01926 50S ribosome-binding GTPase 160 283 2.6E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 360 429 5.2E-27 T 28-03-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 6.4E-141 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 Pfam PF09269 Domain of unknown function (DUF1967) 360 428 2.2E-25 T 28-03-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 Gene3D G3DSA:3.40.50.300 158 337 2.2E-34 T 28-03-2018 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 SUPERFAMILY SSF82051 1 157 1.44E-55 T 28-03-2018 IPR006169 GTP1/OBG domain RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 Hamap MF_01454 GTPase Obg [obg]. 1 329 47.176 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 28-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 Gene3D G3DSA:2.70.210.12 1 155 7.2E-58 T 28-03-2018 IPR006169 GTP1/OBG domain RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 Pfam PF01018 GTP1/OBG 3 157 1.5E-60 T 28-03-2018 IPR006169 GTP1/OBG domain RK98_RS14765 d8297f9de0e35de25b00780b02d8f0b3 430 PIRSF PIRSF002401 1 378 1.4E-141 T 28-03-2018 IPR035101 GTP-binding protein, Obg-type RK98_RS08070 7c92f747f690b280178d60e276d99174 515 Pfam PF01297 Zinc-uptake complex component A periplasmic 36 319 2.5E-66 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 SUPERFAMILY SSF53807 31 320 1.18E-74 T 28-03-2018 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 Gene3D G3DSA:2.40.128.20 328 515 7.3E-67 T 28-03-2018 IPR012674 Calycin RK98_RS08070 7c92f747f690b280178d60e276d99174 515 PRINTS PR00690 Adhesin family signature 258 276 2.6E-8 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 PRINTS PR00690 Adhesin family signature 63 76 2.6E-8 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 PRINTS PR00690 Adhesin family signature 32 50 2.6E-8 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 PRINTS PR00690 Adhesin family signature 76 93 2.6E-8 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 PRINTS PR00691 Adhesin B signature 254 271 2.3E-10 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 PRINTS PR00691 Adhesin B signature 32 53 2.3E-10 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 PRINTS PR00691 Adhesin B signature 76 95 2.3E-10 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 PRINTS PR00691 Adhesin B signature 57 75 2.3E-10 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 PRINTS PR00691 Adhesin B signature 299 317 2.3E-10 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 Gene3D G3DSA:3.40.50.1980 201 321 2.9E-27 T 28-03-2018 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 SUPERFAMILY SSF50814 330 515 1.26E-75 T 28-03-2018 IPR012674 Calycin RK98_RS08070 7c92f747f690b280178d60e276d99174 515 Gene3D G3DSA:3.40.50.1980 32 200 2.4E-50 T 28-03-2018 RK98_RS08070 7c92f747f690b280178d60e276d99174 515 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 336 515 4.1E-80 T 28-03-2018 IPR015304 ZinT domain GO:0008270 RK98_RS12515 3b2f43fcc21ad1baf970978b6042e1ec 62 Pfam PF00830 Ribosomal L28 family 3 58 3.1E-19 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12515 3b2f43fcc21ad1baf970978b6042e1ec 62 SUPERFAMILY SSF143800 1 60 3.53E-23 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12515 3b2f43fcc21ad1baf970978b6042e1ec 62 Gene3D G3DSA:2.30.170.40 2 61 8.3E-19 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12515 3b2f43fcc21ad1baf970978b6042e1ec 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 18.51 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12515 3b2f43fcc21ad1baf970978b6042e1ec 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 4.0E-21 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 Gene3D G3DSA:2.160.20.60 1208 1478 2.3E-86 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 Gene3D G3DSA:3.20.20.70 769 1206 1.6E-150 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 Pfam PF00310 Glutamine amidotransferases class-II 20 430 2.4E-154 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 SUPERFAMILY SSF56235 20 432 7.13E-126 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 SUPERFAMILY SSF51395 440 1182 5.29E-233 T 28-03-2018 RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 Pfam PF01645 Conserved region in glutamate synthase 787 1152 1.2E-152 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 Gene3D G3DSA:3.20.20.70 438 768 5.6E-81 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 Pfam PF04898 Glutamate synthase central domain 458 733 5.4E-98 T 28-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 SUPERFAMILY SSF69336 1200 1464 2.75E-77 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 Pfam PF01493 GXGXG motif 1231 1416 1.4E-66 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 RK98_RS03805 d9b0d74aa806e73e72224cfb77564ea8 1499 Gene3D G3DSA:3.60.20.10 20 437 3.5E-131 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 Pfam PF00106 short chain dehydrogenase 3 197 3.2E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 Gene3D G3DSA:3.40.50.720 141 234 1.1E-10 T 28-03-2018 RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 Gene3D G3DSA:3.40.50.720 1 140 4.2E-36 T 28-03-2018 RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 5.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 5.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 SUPERFAMILY SSF51735 3 230 6.67E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 9.4E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.4E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 9.4E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.4E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07070 1d88867bd22a6dac26b952442811a124 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 9.4E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS15095 6ce71ba26aa664fd76ff575574819966 232 Pfam PF00746 LPXTG cell wall anchor motif 190 230 5.9E-5 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS15095 6ce71ba26aa664fd76ff575574819966 232 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 196 230 1.8E-6 T 28-03-2018 RK98_RS15095 6ce71ba26aa664fd76ff575574819966 232 Pfam PF06464 DMAP1-binding Domain 56 163 1.4E-6 T 28-03-2018 IPR010506 DMAP1-binding domain RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 SUPERFAMILY SSF55347 151 315 1.64E-61 T 28-03-2018 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 Gene3D G3DSA:3.30.360.10 161 316 1.0E-58 T 28-03-2018 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 326 4.2E-131 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 8.8E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 8.8E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 8.8E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 8.8E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 8.8E-33 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 314 1.4E-60 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 PIRSF PIRSF000149 1 336 5.8E-115 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 SUPERFAMILY SSF51735 1 150 1.73E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 1.2E-35 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 SMART SM00846 3 151 8.8E-85 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02075 c9b7e8db6d868ca9ed73546ad3ab7b9d 336 Gene3D G3DSA:3.40.50.720 1 160 1.4E-71 T 28-03-2018 RK98_RS08720 302f7b183c55a00733aa091e219a4fd7 302 Gene3D G3DSA:3.40.50.1980 140 302 6.8E-24 T 28-03-2018 RK98_RS08720 302f7b183c55a00733aa091e219a4fd7 302 Pfam PF01497 Periplasmic binding protein 50 274 2.7E-27 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RK98_RS08720 302f7b183c55a00733aa091e219a4fd7 302 SUPERFAMILY SSF53807 36 293 3.77E-46 T 28-03-2018 RK98_RS08720 302f7b183c55a00733aa091e219a4fd7 302 Gene3D G3DSA:3.40.50.1980 28 139 1.7E-20 T 28-03-2018 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 Pfam PF09334 tRNA synthetases class I (M) 40 171 4.8E-19 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 805 0.0 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 413 608 2.0E-20 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 220 399 1.0E-67 T 28-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 Gene3D G3DSA:3.90.740.10 232 399 1.8E-58 T 28-03-2018 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 Pfam PF08264 Anticodon-binding domain of tRNA 656 767 9.2E-23 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 SUPERFAMILY SSF52374 4 225 1.92E-145 T 28-03-2018 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 SUPERFAMILY SSF52374 412 625 1.92E-145 T 28-03-2018 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 3 804 23.124 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 SUPERFAMILY SSF47323 620 804 8.04E-40 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 Gene3D G3DSA:3.40.50.620 2 231 3.1E-79 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 Gene3D G3DSA:3.40.50.620 400 605 6.9E-67 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 1.2E-57 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 486 504 1.2E-57 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 558 568 1.2E-57 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 1.2E-57 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 1.2E-57 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 214 233 1.2E-57 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 PRINTS PR00985 Leucyl-tRNA synthetase signature 525 547 1.2E-57 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 43 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 Gene3D G3DSA:1.10.730.10 606 741 7.6E-33 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS00360 8834f35493260a88d31af7e7041a51d8 805 SUPERFAMILY SSF50677 225 411 1.78E-53 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 SUPERFAMILY SSF46785 16 78 4.08E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 ProSitePatterns PS00894 DeoR-type HTH domain signature. 18 52 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 Gene3D G3DSA:3.40.50.1360 79 257 1.6E-31 T 28-03-2018 RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 Gene3D G3DSA:1.10.10.10 6 78 3.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 50 2.8E-11 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 50 68 2.8E-11 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 Pfam PF08220 DeoR-like helix-turn-helix domain 18 73 8.2E-23 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 SMART SM00420 18 70 4.3E-24 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 Pfam PF00455 DeoR C terminal sensor domain 88 245 1.2E-47 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 SUPERFAMILY SSF100950 87 246 4.23E-29 T 28-03-2018 RK98_RS09190 aafc0414b6c70e12573978e7e290f215 263 SMART SM01134 86 247 2.1E-60 T 28-03-2018 RK98_RS12390 31fc66cbb77de5effdcd92f1d4da2952 435 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 21 426 3.4E-131 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RK98_RS12390 31fc66cbb77de5effdcd92f1d4da2952 435 Pfam PF00860 Permease family 25 397 6.4E-108 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RK98_RS12390 31fc66cbb77de5effdcd92f1d4da2952 435 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 346 366 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 Gene3D G3DSA:3.30.300.10 389 513 1.2E-52 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 1.1E-7 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 SUPERFAMILY SSF52402 188 406 8.6E-62 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 Pfam PF00117 Glutamine amidotransferase class-I 12 190 8.9E-45 T 28-03-2018 IPR017926 Glutamine amidotransferase RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 1.7E-6 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 1.7E-6 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 1.7E-6 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 513 2.9E-153 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 Pfam PF03054 tRNA methyl transferase 220 249 2.5E-5 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 SUPERFAMILY SSF52317 8 228 4.4E-56 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 Pfam PF00958 GMP synthase C terminal domain 423 512 1.3E-42 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 SUPERFAMILY SSF54810 393 513 2.88E-49 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 196 2.3E-82 T 28-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 513 54.718 T 28-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 PRINTS PR00097 Anthranilate synthase component II signature 168 181 5.2E-6 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 PRINTS PR00097 Anthranilate synthase component II signature 54 63 5.2E-6 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 PRINTS PR00097 Anthranilate synthase component II signature 81 92 5.2E-6 T 28-03-2018 RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 Gene3D G3DSA:3.40.50.620 213 388 4.7E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS04260 980bc5f3b4dff1626f45b71bd00d8254 513 Gene3D G3DSA:3.40.50.880 5 212 6.4E-54 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS14130 8ba2e7131cd1c5704d7342a8cb5c5137 559 SUPERFAMILY SSF52540 1 219 6.34E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14130 8ba2e7131cd1c5704d7342a8cb5c5137 559 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 553 3.7E-164 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RK98_RS14130 8ba2e7131cd1c5704d7342a8cb5c5137 559 PIRSF PIRSF003128 1 558 1.7E-172 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 RK98_RS14130 8ba2e7131cd1c5704d7342a8cb5c5137 559 Gene3D G3DSA:3.40.50.300 239 524 1.4E-17 T 28-03-2018 RK98_RS14130 8ba2e7131cd1c5704d7342a8cb5c5137 559 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 508 5.8E-20 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal RK98_RS14130 8ba2e7131cd1c5704d7342a8cb5c5137 559 Gene3D G3DSA:3.40.50.300 1 180 1.0E-29 T 28-03-2018 RK98_RS14130 8ba2e7131cd1c5704d7342a8cb5c5137 559 SUPERFAMILY SSF52540 296 508 6.1E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14130 8ba2e7131cd1c5704d7342a8cb5c5137 559 SUPERFAMILY SSF52540 3 50 6.1E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07465 7e4831f1271bbb9cb91d83842aa47086 517 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 247 8.8E-71 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RK98_RS07465 7e4831f1271bbb9cb91d83842aa47086 517 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 3 508 2.0E-303 T 28-03-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 RK98_RS07465 7e4831f1271bbb9cb91d83842aa47086 517 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 257 452 5.9E-31 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RK98_RS07465 7e4831f1271bbb9cb91d83842aa47086 517 Gene3D G3DSA:3.30.420.40 1 248 4.8E-64 T 28-03-2018 RK98_RS07465 7e4831f1271bbb9cb91d83842aa47086 517 PIRSF PIRSF000538 1 505 2.2E-138 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RK98_RS07465 7e4831f1271bbb9cb91d83842aa47086 517 Gene3D G3DSA:3.30.420.40 249 515 9.8E-60 T 28-03-2018 RK98_RS07465 7e4831f1271bbb9cb91d83842aa47086 517 SUPERFAMILY SSF53067 1 247 1.47E-68 T 28-03-2018 RK98_RS07465 7e4831f1271bbb9cb91d83842aa47086 517 SUPERFAMILY SSF53067 252 498 6.48E-64 T 28-03-2018 RK98_RS07465 7e4831f1271bbb9cb91d83842aa47086 517 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 364 384 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RK98_RS10585 3857ce98a413d6bbd3c6cc937f7a397f 183 Pfam PF13392 HNH endonuclease 71 115 1.3E-10 T 28-03-2018 IPR003615 HNH nuclease RK98_RS10585 3857ce98a413d6bbd3c6cc937f7a397f 183 Gene3D G3DSA:1.10.10.10 119 181 0.0016 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS10585 3857ce98a413d6bbd3c6cc937f7a397f 183 SMART SM00507 66 114 5.0E-4 T 28-03-2018 IPR003615 HNH nuclease RK98_RS10585 3857ce98a413d6bbd3c6cc937f7a397f 183 Pfam PF07463 NUMOD4 motif 3 62 7.5E-13 T 28-03-2018 IPR010902 NUMOD4 GO:0016788 RK98_RS10585 3857ce98a413d6bbd3c6cc937f7a397f 183 SUPERFAMILY SSF54060 3 120 7.77E-28 T 28-03-2018 RK98_RS12185 0e9fb12941afa143113c38ab55f3d84d 319 TIGRFAM TIGR01002 hlyII: beta-channel forming cytolysin 4 319 8.4E-132 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS12185 0e9fb12941afa143113c38ab55f3d84d 319 Pfam PF07968 Leukocidin/Hemolysin toxin family 63 313 1.6E-82 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS12185 0e9fb12941afa143113c38ab55f3d84d 319 PRINTS PR01468 Staphylococcal bi-component toxin signature 248 265 3.7E-13 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS12185 0e9fb12941afa143113c38ab55f3d84d 319 PRINTS PR01468 Staphylococcal bi-component toxin signature 127 148 3.7E-13 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS12185 0e9fb12941afa143113c38ab55f3d84d 319 PRINTS PR01468 Staphylococcal bi-component toxin signature 66 85 3.7E-13 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS12185 0e9fb12941afa143113c38ab55f3d84d 319 SUPERFAMILY SSF56959 29 318 3.6E-101 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS12185 0e9fb12941afa143113c38ab55f3d84d 319 Gene3D G3DSA:2.70.240.10 34 317 7.2E-92 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS12185 0e9fb12941afa143113c38ab55f3d84d 319 ProSitePatterns PS00274 Aerolysin type toxins signature. 287 296 - T 28-03-2018 IPR005831 Aerolysin/haemolysin toxin, conserved site GO:0005576 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 Gene3D G3DSA:1.10.240.10 225 326 1.3E-36 T 28-03-2018 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 Pfam PF01479 S4 domain 361 400 1.4E-7 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 419 45.79 T 28-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 1.7E-30 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 217 229 1.7E-30 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 1.7E-30 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 1.7E-30 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 419 2.5E-134 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 Gene3D G3DSA:3.40.50.620 6 224 3.1E-70 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 SMART SM00363 353 415 1.6E-7 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 SUPERFAMILY SSF55174 322 419 9.16E-25 T 28-03-2018 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 Pfam PF00579 tRNA synthetases class I (W and Y) 30 324 1.6E-84 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 SUPERFAMILY SSF52374 6 324 3.03E-112 T 28-03-2018 RK98_RS00195 18f3fb70c6c4d7aebe56b1bd0aa7cb80 420 Gene3D G3DSA:3.10.290.10 327 420 1.7E-22 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS02595 fe540b5df18100e86645f1b35bbbdb45 188 Gene3D G3DSA:3.40.50.450 1 187 1.3E-55 T 28-03-2018 RK98_RS02595 fe540b5df18100e86645f1b35bbbdb45 188 Pfam PF03641 Possible lysine decarboxylase 46 175 2.8E-44 T 28-03-2018 IPR031100 LOG family RK98_RS02595 fe540b5df18100e86645f1b35bbbdb45 188 SUPERFAMILY SSF102405 1 179 1.27E-58 T 28-03-2018 RK98_RS02595 fe540b5df18100e86645f1b35bbbdb45 188 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 177 3.8E-59 T 28-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG RK98_RS04095 d690ea6b3ddf6e514f66ba79cf8118b0 90 Pfam PF01527 Transposase 3 76 2.0E-9 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 RK98_RS04095 d690ea6b3ddf6e514f66ba79cf8118b0 90 SUPERFAMILY SSF46689 5 88 1.79E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS04095 d690ea6b3ddf6e514f66ba79cf8118b0 90 Gene3D G3DSA:1.10.10.60 9 87 9.7E-14 T 28-03-2018 RK98_RS02985 df0f5cbd82eae054729d760edd0bdfbd 336 Gene3D G3DSA:3.90.180.10 1 143 3.2E-45 T 28-03-2018 RK98_RS02985 df0f5cbd82eae054729d760edd0bdfbd 336 SMART SM00829 8 334 1.8E-7 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RK98_RS02985 df0f5cbd82eae054729d760edd0bdfbd 336 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 131 6.1E-29 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RK98_RS02985 df0f5cbd82eae054729d760edd0bdfbd 336 Gene3D G3DSA:3.40.50.720 144 329 3.4E-35 T 28-03-2018 RK98_RS02985 df0f5cbd82eae054729d760edd0bdfbd 336 SUPERFAMILY SSF51735 135 304 3.38E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS02985 df0f5cbd82eae054729d760edd0bdfbd 336 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 165 193 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RK98_RS02985 df0f5cbd82eae054729d760edd0bdfbd 336 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RK98_RS02985 df0f5cbd82eae054729d760edd0bdfbd 336 SUPERFAMILY SSF50129 1 169 1.51E-46 T 28-03-2018 IPR011032 GroES-like RK98_RS02985 df0f5cbd82eae054729d760edd0bdfbd 336 Pfam PF00107 Zinc-binding dehydrogenase 172 300 1.9E-29 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RK98_RS01115 511df4663c15e2075354a462f8dd3268 578 SMART SM00382 366 552 2.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS01115 511df4663c15e2075354a462f8dd3268 578 SUPERFAMILY SSF90123 3 320 2.49E-79 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS01115 511df4663c15e2075354a462f8dd3268 578 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS01115 511df4663c15e2075354a462f8dd3268 578 SUPERFAMILY SSF52540 333 576 1.1E-96 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS01115 511df4663c15e2075354a462f8dd3268 578 Pfam PF00005 ABC transporter 357 506 1.4E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS01115 511df4663c15e2075354a462f8dd3268 578 Pfam PF00664 ABC transporter transmembrane region 17 294 1.3E-47 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS01115 511df4663c15e2075354a462f8dd3268 578 Gene3D G3DSA:1.20.1560.10 1 323 1.2E-65 T 28-03-2018 RK98_RS01115 511df4663c15e2075354a462f8dd3268 578 Gene3D G3DSA:3.40.50.300 328 578 1.3E-78 T 28-03-2018 RK98_RS11115 659c7ea7efdd71cb867b359631cd8aab 174 Gene3D G3DSA:2.10.109.10 20 174 1.0E-31 T 28-03-2018 RK98_RS11115 659c7ea7efdd71cb867b359631cd8aab 174 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 73 85 2.2E-11 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RK98_RS11115 659c7ea7efdd71cb867b359631cd8aab 174 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 125 144 2.2E-11 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RK98_RS11115 659c7ea7efdd71cb867b359631cd8aab 174 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 24 40 2.2E-11 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RK98_RS11115 659c7ea7efdd71cb867b359631cd8aab 174 Pfam PF00717 Peptidase S24-like 31 91 1.2E-9 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C RK98_RS11115 659c7ea7efdd71cb867b359631cd8aab 174 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 9 165 8.5E-45 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RK98_RS11115 659c7ea7efdd71cb867b359631cd8aab 174 SUPERFAMILY SSF51306 23 171 2.69E-37 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C RK98_RS10050 443cd01ba80e3ebd08d4a1517374c688 536 Pfam PF00488 MutS domain V 353 533 7.9E-30 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RK98_RS10050 443cd01ba80e3ebd08d4a1517374c688 536 Gene3D G3DSA:3.40.50.300 316 535 1.7E-22 T 28-03-2018 RK98_RS10050 443cd01ba80e3ebd08d4a1517374c688 536 SUPERFAMILY SSF52540 316 532 4.09E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS10050 443cd01ba80e3ebd08d4a1517374c688 536 Gene3D G3DSA:1.10.1420.10 41 314 2.6E-5 T 28-03-2018 RK98_RS10050 443cd01ba80e3ebd08d4a1517374c688 536 SMART SM00534 349 534 5.4E-12 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RK98_RS06515 f157e7f2b4755c69c1c52aa53da4c4e1 192 SUPERFAMILY SSF54211 3 84 9.99E-27 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS06515 f157e7f2b4755c69c1c52aa53da4c4e1 192 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 29 172 1.9E-59 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RK98_RS06515 f157e7f2b4755c69c1c52aa53da4c4e1 192 SUPERFAMILY SSF54211 86 176 1.02E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS06515 f157e7f2b4755c69c1c52aa53da4c4e1 192 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 1 191 37.805 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RK98_RS06515 f157e7f2b4755c69c1c52aa53da4c4e1 192 Gene3D G3DSA:3.30.230.40 88 192 2.8E-28 T 28-03-2018 RK98_RS06515 f157e7f2b4755c69c1c52aa53da4c4e1 192 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 154 166 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RK98_RS06515 f157e7f2b4755c69c1c52aa53da4c4e1 192 Gene3D G3DSA:3.30.230.40 2 86 2.9E-26 T 28-03-2018 RK98_RS06515 f157e7f2b4755c69c1c52aa53da4c4e1 192 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 59 72 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 Gene3D G3DSA:3.40.50.150 234 435 4.0E-53 T 28-03-2018 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 Pfam PF01189 16S rRNA methyltransferase RsmB/F 243 430 4.0E-51 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 SUPERFAMILY SSF48013 4 126 1.11E-34 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 6 433 2.0E-118 T 28-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 Pfam PF01029 NusB family 4 125 7.6E-31 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 SUPERFAMILY SSF53335 138 432 9.18E-66 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 Gene3D G3DSA:3.30.70.1170 167 233 6.8E-7 T 28-03-2018 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 224 238 1.2E-29 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 415 432 1.2E-29 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 253 263 1.2E-29 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 1.2E-29 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 1.2E-29 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS12480 f55ed926e850f84f697ddb2b35a1af7b 435 Gene3D G3DSA:1.10.940.10 2 141 1.5E-27 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RK98_RS00155 47632220d7c85cafd00d8b7eb58dcfec 148 Gene3D G3DSA:3.30.300.20 1 147 7.9E-27 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta RK98_RS00155 47632220d7c85cafd00d8b7eb58dcfec 148 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 4 141 5.5E-61 T 28-03-2018 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes RK98_RS00155 47632220d7c85cafd00d8b7eb58dcfec 148 Pfam PF02566 OsmC-like protein 41 141 4.3E-20 T 28-03-2018 IPR003718 OsmC/Ohr family RK98_RS00155 47632220d7c85cafd00d8b7eb58dcfec 148 SUPERFAMILY SSF82784 3 141 1.96E-31 T 28-03-2018 IPR003718 OsmC/Ohr family RK98_RS00160 9761eac2ee5f769dc3929909863fff9c 385 PIRSF PIRSF000524 1 384 2.2E-117 T 28-03-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661 RK98_RS00160 9761eac2ee5f769dc3929909863fff9c 385 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 206 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RK98_RS00160 9761eac2ee5f769dc3929909863fff9c 385 SUPERFAMILY SSF53383 5 364 8.45E-92 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS00160 9761eac2ee5f769dc3929909863fff9c 385 Gene3D G3DSA:3.40.640.10 14 269 7.3E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS00160 9761eac2ee5f769dc3929909863fff9c 385 Pfam PF00266 Aminotransferase class-V 8 332 4.2E-41 T 28-03-2018 IPR000192 Aminotransferase class V domain RK98_RS00160 9761eac2ee5f769dc3929909863fff9c 385 Gene3D G3DSA:3.90.1150.10 270 385 2.1E-28 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS00680 18322d35fd7c57a82169094d0f267e5c 258 Pfam PF08862 Domain of unknown function DUF1829 159 249 6.5E-20 T 28-03-2018 IPR014961 Domain of unknown function DUF1829 RK98_RS00680 18322d35fd7c57a82169094d0f267e5c 258 Pfam PF08861 Domain of unknown function DUF1828 32 121 4.3E-26 T 28-03-2018 IPR014960 Domain of unknown function DUF1828 RK98_RS06595 9c723a0506bdbe3465ecd8447dc0efd9 166 Gene3D G3DSA:3.40.630.30 1 166 6.2E-28 T 28-03-2018 RK98_RS06595 9c723a0506bdbe3465ecd8447dc0efd9 166 SUPERFAMILY SSF55729 1 155 5.74E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS06595 9c723a0506bdbe3465ecd8447dc0efd9 166 Pfam PF00583 Acetyltransferase (GNAT) family 22 138 2.8E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS03265 eadc185d99a56f23c982d3c4cc8cddaf 321 Gene3D G3DSA:3.40.50.720 1 319 2.6E-33 T 28-03-2018 RK98_RS03265 eadc185d99a56f23c982d3c4cc8cddaf 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 240 4.5E-25 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 RK98_RS03265 eadc185d99a56f23c982d3c4cc8cddaf 321 SUPERFAMILY SSF51735 1 313 2.28E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS11405 457f719b60d7c26369961fb89053b920 503 Gene3D G3DSA:3.90.780.10 325 498 2.0E-19 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS11405 457f719b60d7c26369961fb89053b920 503 Gene3D G3DSA:3.60.21.10 1 307 1.2E-48 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS11405 457f719b60d7c26369961fb89053b920 503 Pfam PF02872 5'-nucleotidase, C-terminal domain 326 459 1.5E-14 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS11405 457f719b60d7c26369961fb89053b920 503 PRINTS PR01607 Apyrase family signature 441 460 3.1E-11 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS11405 457f719b60d7c26369961fb89053b920 503 PRINTS PR01607 Apyrase family signature 7 25 3.1E-11 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS11405 457f719b60d7c26369961fb89053b920 503 PRINTS PR01607 Apyrase family signature 243 263 3.1E-11 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS11405 457f719b60d7c26369961fb89053b920 503 PRINTS PR01607 Apyrase family signature 363 386 3.1E-11 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS11405 457f719b60d7c26369961fb89053b920 503 PRINTS PR01607 Apyrase family signature 184 201 3.1E-11 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS11405 457f719b60d7c26369961fb89053b920 503 PRINTS PR01607 Apyrase family signature 217 240 3.1E-11 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS11405 457f719b60d7c26369961fb89053b920 503 SUPERFAMILY SSF56300 3 296 2.17E-58 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS11405 457f719b60d7c26369961fb89053b920 503 SUPERFAMILY SSF55816 326 488 6.15E-20 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS11980 294d201a1ae2506f0e48aac145e77a28 350 Pfam PF05031 Iron Transport-associated domain 67 177 9.2E-25 T 28-03-2018 IPR006635 NEAT domain RK98_RS11980 294d201a1ae2506f0e48aac145e77a28 350 SUPERFAMILY SSF158911 56 190 5.36E-38 T 28-03-2018 RK98_RS11980 294d201a1ae2506f0e48aac145e77a28 350 SMART SM00725 62 184 8.5E-42 T 28-03-2018 IPR006635 NEAT domain RK98_RS11980 294d201a1ae2506f0e48aac145e77a28 350 Pfam PF00746 LPXTG cell wall anchor motif 305 350 2.0E-9 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS11980 294d201a1ae2506f0e48aac145e77a28 350 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 312 348 3.1E-5 T 28-03-2018 RK98_RS00325 cdd93abe44970a9fd3b80a03b61ebac2 469 Gene3D G3DSA:3.30.70.360 285 373 8.8E-24 T 28-03-2018 RK98_RS00325 cdd93abe44970a9fd3b80a03b61ebac2 469 Gene3D G3DSA:3.30.70.360 204 284 2.7E-8 T 28-03-2018 RK98_RS00325 cdd93abe44970a9fd3b80a03b61ebac2 469 SUPERFAMILY SSF55031 183 380 2.97E-53 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS00325 cdd93abe44970a9fd3b80a03b61ebac2 469 Pfam PF01546 Peptidase family M20/M25/M40 83 463 1.2E-27 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RK98_RS00325 cdd93abe44970a9fd3b80a03b61ebac2 469 Gene3D G3DSA:3.40.630.10 2 189 5.7E-25 T 28-03-2018 RK98_RS00325 cdd93abe44970a9fd3b80a03b61ebac2 469 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 10 462 3.3E-192 T 28-03-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 RK98_RS00325 cdd93abe44970a9fd3b80a03b61ebac2 469 SUPERFAMILY SSF53187 3 183 1.77E-60 T 28-03-2018 RK98_RS00325 cdd93abe44970a9fd3b80a03b61ebac2 469 SUPERFAMILY SSF53187 384 466 1.77E-60 T 28-03-2018 RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 SUPERFAMILY SSF101094 167 305 1.39E-55 T 28-03-2018 IPR014874 Staphylcoagulase, N-terminal RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 ProSitePatterns PS00429 Staphylocoagulase repeat signature. 546 572 - T 28-03-2018 IPR001443 Staphylocoagulase repeat RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 Pfam PF04022 Staphylocoagulase repeat 493 519 8.2E-16 T 28-03-2018 IPR001443 Staphylocoagulase repeat RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 Pfam PF04022 Staphylocoagulase repeat 601 627 7.4E-19 T 28-03-2018 IPR001443 Staphylocoagulase repeat RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 Pfam PF04022 Staphylocoagulase repeat 547 573 2.7E-17 T 28-03-2018 IPR001443 Staphylocoagulase repeat RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 Pfam PF04022 Staphylocoagulase repeat 574 600 2.7E-17 T 28-03-2018 IPR001443 Staphylocoagulase repeat RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 Pfam PF04022 Staphylocoagulase repeat 628 654 9.2E-17 T 28-03-2018 IPR001443 Staphylocoagulase repeat RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 Pfam PF04022 Staphylocoagulase repeat 520 546 2.1E-17 T 28-03-2018 IPR001443 Staphylocoagulase repeat RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 Pfam PF08764 Staphylococcus aureus coagulase 29 305 1.3E-135 T 28-03-2018 IPR014874 Staphylcoagulase, N-terminal RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 ProSitePatterns PS00429 Staphylocoagulase repeat signature. 600 626 - T 28-03-2018 IPR001443 Staphylocoagulase repeat RK98_RS05150 3821a66e1daf6efea5f2bf3594b3e282 658 SUPERFAMILY SSF101094 27 166 2.3E-56 T 28-03-2018 IPR014874 Staphylcoagulase, N-terminal RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 56.982 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 Gene3D G3DSA:3.40.50.300 79 353 2.6E-91 T 28-03-2018 RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 77 5.7E-22 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 Gene3D G3DSA:1.10.1140.10 354 464 2.0E-42 T 28-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 SUPERFAMILY SSF47917 351 466 1.33E-50 T 28-03-2018 RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 SUPERFAMILY SSF50615 2 78 4.91E-25 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 348 4.8E-67 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 SUPERFAMILY SSF52540 81 353 5.4E-89 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 SMART SM00382 147 332 6.5E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 466 4.1E-255 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 RK98_RS09710 a0bd49deccd6305f91345514456555ed 470 Gene3D G3DSA:2.40.10.170 1 78 8.5E-29 T 28-03-2018 RK98_RS02465 49d48ae41e42154c1ab6487eab7fb97e 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 8.3E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS02465 49d48ae41e42154c1ab6487eab7fb97e 228 Gene3D G3DSA:3.40.50.2300 1 120 4.6E-32 T 28-03-2018 RK98_RS02465 49d48ae41e42154c1ab6487eab7fb97e 228 SUPERFAMILY SSF52172 2 180 1.81E-35 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS02465 49d48ae41e42154c1ab6487eab7fb97e 228 Pfam PF00072 Response regulator receiver domain 5 112 7.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS02465 49d48ae41e42154c1ab6487eab7fb97e 228 SMART SM00448 2 112 4.3E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS02465 49d48ae41e42154c1ab6487eab7fb97e 228 SMART SM00862 148 224 3.4E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS02465 49d48ae41e42154c1ab6487eab7fb97e 228 Gene3D G3DSA:1.10.10.10 121 228 2.3E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 Pfam PF06480 FtsH Extracellular 9 99 7.4E-12 T 28-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 Gene3D G3DSA:1.10.8.60 351 422 2.1E-24 T 28-03-2018 RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 SMART SM00382 197 336 3.4E-26 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 SUPERFAMILY SSF52540 159 405 1.56E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 Pfam PF01434 Peptidase family M41 395 603 1.2E-83 T 28-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 333 3.3E-46 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 624 37.517 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 Gene3D G3DSA:3.40.50.300 140 350 6.7E-65 T 28-03-2018 RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 112 604 7.0E-239 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 RK98_RS03560 ed16c2e475c75e9070350f85366e73ff 697 SUPERFAMILY SSF140990 415 609 6.02E-70 T 28-03-2018 RK98_RS12455 cb358ce8a047dad1fb8e744b2339f43b 802 Gene3D G3DSA:3.40.50.300 262 428 3.4E-26 T 28-03-2018 RK98_RS12455 cb358ce8a047dad1fb8e744b2339f43b 802 SMART SM00490 563 660 3.6E-9 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS12455 cb358ce8a047dad1fb8e744b2339f43b 802 SUPERFAMILY SSF52540 530 705 2.47E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12455 cb358ce8a047dad1fb8e744b2339f43b 802 SUPERFAMILY SSF52540 262 445 8.12E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12455 cb358ce8a047dad1fb8e744b2339f43b 802 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 801 24.966 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RK98_RS12455 cb358ce8a047dad1fb8e744b2339f43b 802 SMART SM00487 261 460 4.1E-19 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK98_RS12455 cb358ce8a047dad1fb8e744b2339f43b 802 TIGRFAM TIGR00595 priA: primosomal protein N' 289 798 1.3E-214 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 RK98_RS12455 cb358ce8a047dad1fb8e744b2339f43b 802 Pfam PF00271 Helicase conserved C-terminal domain 564 659 3.3E-8 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS12455 cb358ce8a047dad1fb8e744b2339f43b 802 Gene3D G3DSA:3.40.50.300 462 693 1.3E-21 T 28-03-2018 RK98_RS12455 cb358ce8a047dad1fb8e744b2339f43b 802 Pfam PF04851 Type III restriction enzyme, res subunit 264 427 2.4E-17 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 Gene3D G3DSA:3.40.50.300 53 309 7.3E-71 T 28-03-2018 RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 SMART SM00994 10 49 8.9E-22 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 405 2.0E-199 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 409 51.479 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 3.5E-48 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 SMART SM00382 109 259 5.2E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 Gene3D G3DSA:1.10.8.60 311 403 2.7E-31 T 28-03-2018 RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 Pfam PF06689 ClpX C4-type zinc finger 12 48 1.0E-18 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 SMART SM01086 311 405 1.5E-30 T 28-03-2018 IPR019489 Clp ATPase, C-terminal RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 SUPERFAMILY SSF57716 11 46 5.7E-11 T 28-03-2018 RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 SUPERFAMILY SSF52540 59 394 8.61E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14930 1530a458171f8830f57facfeeb6a458d 420 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 6.6E-16 T 28-03-2018 IPR019489 Clp ATPase, C-terminal RK98_RS14570 9693d58bb323271404f17418bd7a16db 336 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 309 1.8E-80 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B RK98_RS14570 9693d58bb323271404f17418bd7a16db 336 SMART SM00797 24 302 5.3E-125 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B RK98_RS14570 9693d58bb323271404f17418bd7a16db 336 SUPERFAMILY SSF50891 178 292 2.69E-8 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS14570 9693d58bb323271404f17418bd7a16db 336 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 285 2.0E-77 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B RK98_RS00920 bc1213bf7b0d36119eb82b458fe89f2e 485 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 299 481 6.6E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS00920 bc1213bf7b0d36119eb82b458fe89f2e 485 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 280 376 5.8E-29 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RK98_RS00920 bc1213bf7b0d36119eb82b458fe89f2e 485 Gene3D G3DSA:3.40.190.10 146 226 3.9E-18 T 28-03-2018 RK98_RS00920 bc1213bf7b0d36119eb82b458fe89f2e 485 Gene3D G3DSA:1.10.3720.10 274 481 2.2E-43 T 28-03-2018 RK98_RS00920 bc1213bf7b0d36119eb82b458fe89f2e 485 SUPERFAMILY SSF161098 279 470 8.11E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS00920 bc1213bf7b0d36119eb82b458fe89f2e 485 Gene3D G3DSA:3.40.190.10 32 145 2.0E-34 T 28-03-2018 RK98_RS00920 bc1213bf7b0d36119eb82b458fe89f2e 485 SUPERFAMILY SSF53850 12 260 3.58E-63 T 28-03-2018 RK98_RS00920 bc1213bf7b0d36119eb82b458fe89f2e 485 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 259 6.0E-56 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RK98_RS00920 bc1213bf7b0d36119eb82b458fe89f2e 485 SMART SM00062 42 263 3.8E-56 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RK98_RS08335 ab96c1e1a9cae5fc96b5323feec140c9 460 PIRSF PIRSF032522 1 460 3.0E-232 T 28-03-2018 IPR023599 Membrane-associated protein TcaA GO:0016021|GO:0046677 RK98_RS08335 ab96c1e1a9cae5fc96b5323feec140c9 460 Gene3D G3DSA:2.20.28.20 3 30 8.7E-4 T 28-03-2018 RK98_RS08335 ab96c1e1a9cae5fc96b5323feec140c9 460 Pfam PF13248 zinc-ribbon domain 1 25 1.2E-6 T 28-03-2018 RK98_RS10065 d52a297a5dd7564dc7f11137d100faf4 211 Gene3D G3DSA:1.10.10.10 5 74 4.3E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS10065 d52a297a5dd7564dc7f11137d100faf4 211 Pfam PF02629 CoA binding domain 84 180 6.0E-26 T 28-03-2018 IPR003781 CoA-binding GO:0048037 RK98_RS10065 d52a297a5dd7564dc7f11137d100faf4 211 SUPERFAMILY SSF46785 8 78 3.54E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS10065 d52a297a5dd7564dc7f11137d100faf4 211 SMART SM00881 80 181 3.9E-16 T 28-03-2018 IPR003781 CoA-binding GO:0048037 RK98_RS10065 d52a297a5dd7564dc7f11137d100faf4 211 SUPERFAMILY SSF51735 83 208 2.76E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS10065 d52a297a5dd7564dc7f11137d100faf4 211 Gene3D G3DSA:3.40.50.720 78 208 3.4E-16 T 28-03-2018 RK98_RS10065 d52a297a5dd7564dc7f11137d100faf4 211 Pfam PF06971 Putative DNA-binding protein N-terminus 6 54 8.7E-19 T 28-03-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 RK98_RS10065 d52a297a5dd7564dc7f11137d100faf4 211 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 2 210 37.744 T 28-03-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 Gene3D G3DSA:3.30.70.141 1 149 5.4E-60 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 28-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 SUPERFAMILY SSF54919 1 149 1.7E-60 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 4.4E-47 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 4.4E-47 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 4.4E-47 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 4.4E-47 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 4.4E-47 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 SMART SM00562 1 138 4.7E-91 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 37.296 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS13845 f280b2821756bc25beee4fed40a00375 149 Pfam PF00334 Nucleoside diphosphate kinase 2 136 3.6E-57 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS08030 3cb3645d47ce1ea9a6a50006c00eda0b 243 Gene3D G3DSA:3.40.50.300 1 243 2.2E-74 T 28-03-2018 RK98_RS08030 3cb3645d47ce1ea9a6a50006c00eda0b 243 SUPERFAMILY SSF52540 1 235 1.98E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS08030 3cb3645d47ce1ea9a6a50006c00eda0b 243 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS08030 3cb3645d47ce1ea9a6a50006c00eda0b 243 SMART SM00382 26 230 1.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS08030 3cb3645d47ce1ea9a6a50006c00eda0b 243 Pfam PF00005 ABC transporter 18 166 1.5E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS08030 3cb3645d47ce1ea9a6a50006c00eda0b 243 PIRSF PIRSF039085 1 242 3.4E-107 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RK98_RS07175 a8b883c770f2eb94c74d5c1c0e6996a6 68 Gene3D G3DSA:3.30.70.100 1 68 2.0E-23 T 28-03-2018 RK98_RS07175 a8b883c770f2eb94c74d5c1c0e6996a6 68 PRINTS PR00946 Mercury scavenger protein signature 42 56 1.1E-8 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RK98_RS07175 a8b883c770f2eb94c74d5c1c0e6996a6 68 PRINTS PR00946 Mercury scavenger protein signature 56 68 1.1E-8 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RK98_RS07175 a8b883c770f2eb94c74d5c1c0e6996a6 68 PRINTS PR00946 Mercury scavenger protein signature 11 27 1.1E-8 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RK98_RS07175 a8b883c770f2eb94c74d5c1c0e6996a6 68 PRINTS PR00946 Mercury scavenger protein signature 27 42 1.1E-8 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 RK98_RS07175 a8b883c770f2eb94c74d5c1c0e6996a6 68 SUPERFAMILY SSF55008 3 68 1.05E-22 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RK98_RS07175 a8b883c770f2eb94c74d5c1c0e6996a6 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RK98_RS07175 a8b883c770f2eb94c74d5c1c0e6996a6 68 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 6 68 7.5E-21 T 28-03-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 RK98_RS07175 a8b883c770f2eb94c74d5c1c0e6996a6 68 Pfam PF00403 Heavy-metal-associated domain 6 66 1.8E-17 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RK98_RS03260 1b809e5ac6b3214a389716578b2180de 358 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 43 354 2.2E-120 T 28-03-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 RK98_RS03260 1b809e5ac6b3214a389716578b2180de 358 PIRSF PIRSF006468 1 357 4.0E-129 T 28-03-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 RK98_RS03260 1b809e5ac6b3214a389716578b2180de 358 ProSitePatterns PS00770 Aminotransferases class-IV signature. 232 261 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 RK98_RS03260 1b809e5ac6b3214a389716578b2180de 358 Gene3D G3DSA:3.30.470.10 1 179 5.1E-65 T 28-03-2018 RK98_RS03260 1b809e5ac6b3214a389716578b2180de 358 Pfam PF01063 Amino-transferase class IV 69 309 2.2E-38 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RK98_RS03260 1b809e5ac6b3214a389716578b2180de 358 Gene3D G3DSA:3.20.10.10 180 338 1.4E-52 T 28-03-2018 RK98_RS03260 1b809e5ac6b3214a389716578b2180de 358 SUPERFAMILY SSF56752 10 352 4.84E-115 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 PRINTS PR01755 Bacterial translocase SecF protein signature 636 654 2.3E-26 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 PRINTS PR01755 Bacterial translocase SecF protein signature 478 493 2.3E-26 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 PRINTS PR01755 Bacterial translocase SecF protein signature 588 602 2.3E-26 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 PRINTS PR01755 Bacterial translocase SecF protein signature 672 687 2.3E-26 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 SUPERFAMILY SSF82866 506 737 9.81E-38 T 28-03-2018 RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 Gene3D G3DSA:1.20.1640.10 502 745 4.0E-34 T 28-03-2018 RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 SUPERFAMILY SSF82866 219 413 1.06E-37 T 28-03-2018 RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 Gene3D G3DSA:1.20.1640.10 204 414 5.4E-29 T 28-03-2018 RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 451 735 25.956 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 503 721 3.3E-50 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 178 402 1.3E-52 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 424 30.733 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 34 409 4.2E-101 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 Pfam PF02355 Protein export membrane protein 555 733 1.1E-63 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 Pfam PF02355 Protein export membrane protein 241 411 2.2E-14 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 480 724 6.6E-71 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 Pfam PF07549 SecD/SecF GG Motif 32 49 0.039 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RK98_RS14730 3c2f070677484f939c6d0218cf8caa06 759 Pfam PF07549 SecD/SecF GG Motif 474 499 1.5E-5 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site RK98_RS14540 febb0020cdf59d96229b2cc57625009e 157 PRINTS PR01898 Bacterial superantigen superfamily signature 143 156 1.5E-9 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS14540 febb0020cdf59d96229b2cc57625009e 157 PRINTS PR01898 Bacterial superantigen superfamily signature 109 135 1.5E-9 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS14540 febb0020cdf59d96229b2cc57625009e 157 SUPERFAMILY SSF50203 46 156 2.98E-35 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS14540 febb0020cdf59d96229b2cc57625009e 157 Pfam PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain 77 152 5.4E-8 T 28-03-2018 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold GO:0009405 RK98_RS14540 febb0020cdf59d96229b2cc57625009e 157 Gene3D G3DSA:2.40.50.110 74 152 4.8E-30 T 28-03-2018 RK98_RS14540 febb0020cdf59d96229b2cc57625009e 157 ProSitePatterns PS00277 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin signature 1. 147 156 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 Gene3D G3DSA:1.20.120.430 287 459 4.5E-33 T 28-03-2018 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 SUPERFAMILY SSF52540 78 167 2.02E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 SUPERFAMILY SSF52540 202 372 2.02E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 Pfam PF01926 50S ribosome-binding GTPase 225 336 7.7E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 Gene3D G3DSA:1.20.120.430 126 286 8.6E-26 T 28-03-2018 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 SUPERFAMILY SSF116878 125 225 4.45E-49 T 28-03-2018 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 SUPERFAMILY SSF116878 384 459 4.45E-49 T 28-03-2018 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 Pfam PF12631 MnmE helical domain 127 456 1.3E-57 T 28-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 PRINTS PR00449 Transforming protein P21 ras signature 326 339 6.6E-6 T 28-03-2018 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 PRINTS PR00449 Transforming protein P21 ras signature 222 243 6.6E-6 T 28-03-2018 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 PRINTS PR00449 Transforming protein P21 ras signature 262 284 6.6E-6 T 28-03-2018 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 124 1.8E-38 T 28-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 Gene3D G3DSA:3.30.1360.120 1 125 3.1E-42 T 28-03-2018 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 459 3.3E-129 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 225 371 1.5E-25 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS06340 82264fe2db6bb34c8bbb8c5d76bec4da 459 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 459 33.697 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 Gene3D G3DSA:1.10.287.40 2 105 2.3E-28 T 28-03-2018 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 400 4.8E-33 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 7.3E-33 T 28-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 SUPERFAMILY SSF55681 118 418 7.86E-100 T 28-03-2018 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 2.6E-172 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 2.7E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 2.7E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 2.7E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 2.7E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 2.7E-34 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 PIRSF PIRSF001529 1 426 1.7E-199 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 42.905 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 SUPERFAMILY SSF46589 1 113 3.61E-30 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 RK98_RS06280 532b1b2fab2436a6bd5eea404d7549d6 428 Gene3D G3DSA:3.30.930.10 106 427 1.4E-95 T 28-03-2018 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 SUPERFAMILY SSF55979 254 376 1.22E-32 T 28-03-2018 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 2 376 8.9E-113 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 PIRSF PIRSF000804 2 377 5.6E-110 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 SUPERFAMILY SSF55979 2 128 1.09E-22 T 28-03-2018 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 SUPERFAMILY SSF55979 136 251 3.34E-28 T 28-03-2018 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 251 2.8E-42 T 28-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 375 8.0E-40 T 28-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 SMART SM00480 18 372 1.3E-181 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 Gene3D G3DSA:3.10.150.10 1 131 2.4E-26 T 28-03-2018 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 Gene3D G3DSA:3.10.150.10 257 377 6.5E-28 T 28-03-2018 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 Gene3D G3DSA:3.10.150.10 132 255 6.5E-34 T 28-03-2018 RK98_RS06320 3c2676ec9eb3511e920d451652a69f40 377 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 2 128 4.7E-41 T 28-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS02705 9d4aad4eff408ed82d0108652c244d0c 224 SUPERFAMILY SSF46894 125 221 1.47E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RK98_RS02705 9d4aad4eff408ed82d0108652c244d0c 224 Gene3D G3DSA:1.10.10.10 125 224 1.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02705 9d4aad4eff408ed82d0108652c244d0c 224 Pfam PF00072 Response regulator receiver domain 3 111 2.2E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS02705 9d4aad4eff408ed82d0108652c244d0c 224 Gene3D G3DSA:3.40.50.2300 1 124 3.5E-27 T 28-03-2018 RK98_RS02705 9d4aad4eff408ed82d0108652c244d0c 224 SMART SM00448 1 111 3.8E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS02705 9d4aad4eff408ed82d0108652c244d0c 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 221 1.5E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS02705 9d4aad4eff408ed82d0108652c244d0c 224 SUPERFAMILY SSF52172 1 117 9.68E-33 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS02705 9d4aad4eff408ed82d0108652c244d0c 224 SMART SM00862 147 222 7.3E-17 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 303 6.7E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 Gene3D G3DSA:1.10.287.130 229 298 9.4E-12 T 28-03-2018 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 SUPERFAMILY SSF47384 222 304 2.75E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 SMART SM00387 348 456 4.8E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 454 5.5E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 5.5E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 416 434 5.5E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 453 5.5E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 5.5E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 Pfam PF00672 HAMP domain 187 233 9.8E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 SUPERFAMILY SSF158472 186 235 6.15E-10 T 28-03-2018 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 SMART SM00388 239 304 1.6E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 SMART SM00304 186 238 3.9E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 SUPERFAMILY SSF55874 294 453 1.03E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS08300 36971a90a7ac80f1527f309970167a19 457 Gene3D G3DSA:3.30.565.10 299 456 9.5E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS02565 e31857b859a576fbb1a9e728ef30efa3 147 Pfam PF01047 MarR family 36 94 2.0E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS02565 e31857b859a576fbb1a9e728ef30efa3 147 SUPERFAMILY SSF46785 6 138 2.34E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02565 e31857b859a576fbb1a9e728ef30efa3 147 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site RK98_RS02565 e31857b859a576fbb1a9e728ef30efa3 147 SMART SM00347 29 127 5.8E-19 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS02565 e31857b859a576fbb1a9e728ef30efa3 147 Gene3D G3DSA:1.10.10.10 2 143 1.6E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 44 123 3.4E-27 T 28-03-2018 IPR015282 Staphylococcal superantigen-like OB-fold domain RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 152 204 2.1E-7 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 155 178 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 Gene3D G3DSA:3.10.20.120 114 227 2.5E-31 T 28-03-2018 RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 2.7E-19 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01800 Staphylococcus aureus exotoxin signature 114 125 2.7E-19 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01800 Staphylococcus aureus exotoxin signature 194 209 2.7E-19 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01800 Staphylococcus aureus exotoxin signature 154 170 2.7E-19 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01898 Bacterial superantigen superfamily signature 168 182 1.1E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01898 Bacterial superantigen superfamily signature 112 125 1.1E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01898 Bacterial superantigen superfamily signature 209 225 1.1E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01898 Bacterial superantigen superfamily signature 83 109 1.1E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01898 Bacterial superantigen superfamily signature 155 168 1.1E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 16 34 3.9E-57 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 138 155 3.9E-57 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 35 52 3.9E-57 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 163 185 3.9E-57 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 87 110 3.9E-57 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 58 72 3.9E-57 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 214 227 3.9E-57 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 112 132 3.9E-57 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 188 204 3.9E-57 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 Gene3D G3DSA:2.40.50.110 52 113 1.9E-21 T 28-03-2018 RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 SUPERFAMILY SSF54334 133 226 1.11E-26 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS04030 53331e19c3ef77780f76edf310d6002c 227 SUPERFAMILY SSF50203 34 124 4.52E-26 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS10110 08a40814a02ced3da38004046e37354d 427 Gene3D G3DSA:3.30.565.10 275 408 2.8E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS10110 08a40814a02ced3da38004046e37354d 427 SUPERFAMILY SSF55874 290 404 7.98E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS10110 08a40814a02ced3da38004046e37354d 427 Gene3D G3DSA:1.10.287.130 210 271 2.4E-8 T 28-03-2018 RK98_RS10110 08a40814a02ced3da38004046e37354d 427 Pfam PF14501 GHKL domain 323 424 3.6E-18 T 28-03-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 Pfam PF00364 Biotin-requiring enzyme 3 75 2.2E-21 T 28-03-2018 IPR000089 Biotin/lipoyl attachment RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 Gene3D G3DSA:3.90.1170.30 45 119 0.1 T 28-03-2018 RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 Gene3D G3DSA:3.30.559.10 178 420 2.4E-83 T 28-03-2018 RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 SUPERFAMILY SSF52777 192 420 9.78E-81 T 28-03-2018 RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 Pfam PF02817 e3 binding domain 127 159 2.2E-6 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 SUPERFAMILY SSF51230 2 91 7.98E-27 T 28-03-2018 IPR011053 Single hybrid motif RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 Gene3D G3DSA:3.90.1170.30 1 44 6.4E-16 T 28-03-2018 RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 Gene3D G3DSA:4.10.320.10 120 177 3.1E-10 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 192 420 1.9E-79 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS13550 57748f9b54f3f64986052881a80ceef6 422 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 421 2.9E-184 T 28-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 RK98_RS07915 7179e7824b7e47993a3ffd30e666f448 577 SUPERFAMILY SSF90123 8 320 3.92E-48 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS07915 7179e7824b7e47993a3ffd30e666f448 577 SUPERFAMILY SSF52540 325 567 1.39E-90 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07915 7179e7824b7e47993a3ffd30e666f448 577 Pfam PF00005 ABC transporter 350 499 1.3E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS07915 7179e7824b7e47993a3ffd30e666f448 577 Pfam PF00664 ABC transporter transmembrane region 20 290 2.1E-16 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS07915 7179e7824b7e47993a3ffd30e666f448 577 SMART SM00382 359 545 2.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS07915 7179e7824b7e47993a3ffd30e666f448 577 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS07915 7179e7824b7e47993a3ffd30e666f448 577 Gene3D G3DSA:3.40.50.300 322 574 2.7E-79 T 28-03-2018 RK98_RS07915 7179e7824b7e47993a3ffd30e666f448 577 Gene3D G3DSA:1.20.1560.10 2 321 6.3E-35 T 28-03-2018 RK98_RS10105 b18e8214f72a06e112d69ea8e8c306ab 238 SMART SM00448 1 120 1.0E-17 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS10105 b18e8214f72a06e112d69ea8e8c306ab 238 Gene3D G3DSA:2.40.50.40 139 209 5.7E-15 T 28-03-2018 RK98_RS10105 b18e8214f72a06e112d69ea8e8c306ab 238 SMART SM00850 149 237 1.4E-11 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 RK98_RS10105 b18e8214f72a06e112d69ea8e8c306ab 238 Gene3D G3DSA:3.40.50.2300 1 136 2.4E-15 T 28-03-2018 RK98_RS10105 b18e8214f72a06e112d69ea8e8c306ab 238 Pfam PF04397 LytTr DNA-binding domain 151 236 8.6E-20 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 RK98_RS10105 b18e8214f72a06e112d69ea8e8c306ab 238 SUPERFAMILY SSF52172 1 133 8.68E-14 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS10105 b18e8214f72a06e112d69ea8e8c306ab 238 Pfam PF00072 Response regulator receiver domain 3 120 1.4E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS05115 64062e350442d17a21c7552eb7be0cf2 380 Pfam PF13367 Protease prsW family 169 353 2.2E-26 T 28-03-2018 IPR026898 Protease PrsW GO:0008233 RK98_RS09445 2a86d1f0ddd67bb37347a852587b68cb 601 Gene3D G3DSA:3.60.20.10 2 239 3.6E-64 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS09445 2a86d1f0ddd67bb37347a852587b68cb 601 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 601 3.1E-226 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 RK98_RS09445 2a86d1f0ddd67bb37347a852587b68cb 601 Gene3D G3DSA:3.40.50.10490 455 599 4.5E-39 T 28-03-2018 RK98_RS09445 2a86d1f0ddd67bb37347a852587b68cb 601 SUPERFAMILY SSF56235 2 235 3.69E-68 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS09445 2a86d1f0ddd67bb37347a852587b68cb 601 Pfam PF13522 Glutamine amidotransferase domain 63 192 6.1E-22 T 28-03-2018 RK98_RS09445 2a86d1f0ddd67bb37347a852587b68cb 601 Gene3D G3DSA:3.40.50.10490 240 454 7.8E-57 T 28-03-2018 RK98_RS09445 2a86d1f0ddd67bb37347a852587b68cb 601 Pfam PF01380 SIS domain 461 583 5.2E-16 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 RK98_RS09445 2a86d1f0ddd67bb37347a852587b68cb 601 Pfam PF01380 SIS domain 290 413 2.6E-32 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 RK98_RS09445 2a86d1f0ddd67bb37347a852587b68cb 601 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 601 38.741 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 RK98_RS09445 2a86d1f0ddd67bb37347a852587b68cb 601 SUPERFAMILY SSF53697 245 601 3.99E-93 T 28-03-2018 RK98_RS03995 64765a1d1d186a1a1ff8ff541d8f97ca 257 Pfam PF04507 Csa1 family 1 255 2.5E-106 T 28-03-2018 IPR007595 Csa1 family RK98_RS03995 64765a1d1d186a1a1ff8ff541d8f97ca 257 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 254 2.1E-114 T 28-03-2018 IPR007595 Csa1 family RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Gene3D G3DSA:1.10.287.610 1 66 9.4E-22 T 28-03-2018 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Gene3D G3DSA:1.10.150.20 498 563 1.8E-18 T 28-03-2018 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 591 660 3.4E-13 T 28-03-2018 IPR001357 BRCT domain RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 SMART SM00532 3 440 4.8E-276 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Gene3D G3DSA:3.40.50.10190 564 662 2.1E-20 T 28-03-2018 IPR001357 BRCT domain RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 PIRSF PIRSF001604 2 667 4.6E-253 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Gene3D G3DSA:3.30.1490.70 232 314 1.2E-29 T 28-03-2018 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Pfam PF14520 Helix-hairpin-helix domain 438 493 2.9E-4 T 28-03-2018 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Pfam PF12826 Helix-hairpin-helix motif 503 565 1.5E-20 T 28-03-2018 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 324 339 - T 28-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 SMART SM00278 438 457 84.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 SMART SM00278 472 491 110.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 SMART SM00278 536 555 260.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 SUPERFAMILY SSF52113 589 660 8.97E-19 T 28-03-2018 IPR001357 BRCT domain RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Gene3D G3DSA:2.40.50.140 315 382 5.3E-31 T 28-03-2018 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Hamap MF_01588 DNA ligase [ligA]. 2 662 51.855 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Gene3D G3DSA:1.10.150.20 424 497 2.4E-28 T 28-03-2018 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 SUPERFAMILY SSF50249 310 393 1.06E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 SMART SM00292 588 665 1.2E-8 T 28-03-2018 IPR001357 BRCT domain RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 SUPERFAMILY SSF47781 396 576 3.63E-59 T 28-03-2018 IPR010994 RuvA domain 2-like RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 112 141 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Gene3D G3DSA:3.30.470.30 116 231 8.4E-47 T 28-03-2018 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 SUPERFAMILY SSF56091 2 311 1.92E-121 T 28-03-2018 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 400 426 3.6E-11 T 28-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 311 1.4E-131 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 315 391 2.3E-33 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 RK98_RS01335 e1909514e0ea94433bad1c1fcbf05c46 667 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 658 1.4E-265 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 RK98_RS07460 18d021bc6b5c4d5bd94ebb35db40d431 226 Pfam PF07729 FCD domain 86 208 1.0E-19 T 28-03-2018 IPR011711 GntR, C-terminal RK98_RS07460 18d021bc6b5c4d5bd94ebb35db40d431 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 73 2.9E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS07460 18d021bc6b5c4d5bd94ebb35db40d431 226 Gene3D G3DSA:1.10.10.10 11 78 2.1E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07460 18d021bc6b5c4d5bd94ebb35db40d431 226 SMART SM00895 86 215 8.3E-9 T 28-03-2018 IPR011711 GntR, C-terminal RK98_RS07460 18d021bc6b5c4d5bd94ebb35db40d431 226 SUPERFAMILY SSF46785 10 80 2.45E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07460 18d021bc6b5c4d5bd94ebb35db40d431 226 SMART SM00345 19 77 2.6E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS07460 18d021bc6b5c4d5bd94ebb35db40d431 226 SUPERFAMILY SSF48008 83 219 8.11E-18 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal RK98_RS07460 18d021bc6b5c4d5bd94ebb35db40d431 226 Gene3D G3DSA:1.20.120.530 79 221 9.4E-19 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal RK98_RS00525 b8588afc70c94d6e3211b19912afe461 333 Pfam PF13378 Enolase C-terminal domain-like 140 317 6.9E-15 T 28-03-2018 IPR029065 Enolase C-terminal domain-like RK98_RS00525 b8588afc70c94d6e3211b19912afe461 333 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 9 311 5.1E-133 T 28-03-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS00525 b8588afc70c94d6e3211b19912afe461 333 Gene3D G3DSA:3.30.390.10 1 124 2.2E-14 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS00525 b8588afc70c94d6e3211b19912afe461 333 Gene3D G3DSA:3.20.20.120 125 321 2.4E-27 T 28-03-2018 IPR029065 Enolase C-terminal domain-like RK98_RS00525 b8588afc70c94d6e3211b19912afe461 333 SUPERFAMILY SSF51604 136 320 1.97E-28 T 28-03-2018 IPR029065 Enolase C-terminal domain-like RK98_RS00525 b8588afc70c94d6e3211b19912afe461 333 SUPERFAMILY SSF54826 1 111 8.48E-19 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS00525 b8588afc70c94d6e3211b19912afe461 333 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 333 28.379 T 28-03-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 78 22.986 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 78 4.0E-25 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 TIGRFAM TIGR00165 S18: ribosomal protein bS18 11 77 8.6E-38 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 1.3E-21 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 1.3E-21 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 1.3E-21 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 1.3E-21 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 SUPERFAMILY SSF46911 5 78 5.75E-31 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 Pfam PF01084 Ribosomal protein S18 23 73 1.7E-28 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 28-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04390 582a08ace303344f7c4b8725bc46d9bf 80 Gene3D G3DSA:4.10.640.10 3 80 1.1E-34 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14700 829b9815c85318bd960478a272439c5f 420 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 33.367 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 RK98_RS14700 829b9815c85318bd960478a272439c5f 420 Gene3D G3DSA:3.40.50.800 327 420 6.2E-21 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS14700 829b9815c85318bd960478a272439c5f 420 Pfam PF13393 Histidyl-tRNA synthetase 7 313 2.0E-47 T 28-03-2018 RK98_RS14700 829b9815c85318bd960478a272439c5f 420 Gene3D G3DSA:3.30.930.10 1 325 1.1E-67 T 28-03-2018 RK98_RS14700 829b9815c85318bd960478a272439c5f 420 SUPERFAMILY SSF55681 1 319 1.26E-94 T 28-03-2018 RK98_RS14700 829b9815c85318bd960478a272439c5f 420 SUPERFAMILY SSF52954 329 420 4.83E-26 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS14700 829b9815c85318bd960478a272439c5f 420 PIRSF PIRSF001549 1 420 2.0E-121 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 RK98_RS14700 829b9815c85318bd960478a272439c5f 420 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 410 8.9E-154 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 RK98_RS14700 829b9815c85318bd960478a272439c5f 420 Pfam PF03129 Anticodon binding domain 332 420 8.1E-19 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS00200 29687fe804914e44782a9466cfaf52cd 301 Pfam PF00912 Transglycosylase 84 272 1.5E-54 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 RK98_RS00200 29687fe804914e44782a9466cfaf52cd 301 SUPERFAMILY SSF53955 80 296 1.29E-57 T 28-03-2018 IPR023346 Lysozyme-like domain RK98_RS00200 29687fe804914e44782a9466cfaf52cd 301 Gene3D G3DSA:1.10.3810.10 75 289 3.1E-59 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Pfam PF07993 Male sterility protein 2049 2278 4.8E-29 T 28-03-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Pfam PF00550 Phosphopantetheine attachment site 914 977 6.6E-11 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Pfam PF00550 Phosphopantetheine attachment site 1945 2004 3.7E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:3.40.50.980 563 717 5.1E-25 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 SUPERFAMILY SSF47336 904 978 4.19E-18 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 SUPERFAMILY SSF51735 2047 2316 2.54E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 SUPERFAMILY SSF56801 384 925 3.79E-135 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 SUPERFAMILY SSF47336 1933 2006 5.1E-15 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Pfam PF00501 AMP-binding enzyme 1443 1834 2.1E-80 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Pfam PF00501 AMP-binding enzyme 418 807 5.3E-90 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:3.30.300.30 802 915 1.5E-30 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:3.30.300.30 1830 1946 3.2E-26 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:3.40.50.980 409 562 6.8E-46 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:3.40.50.720 2045 2331 5.7E-24 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:3.40.50.980 1435 1554 1.3E-25 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:1.10.1200.10 916 981 4.2E-20 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 SUPERFAMILY SSF56801 1409 1953 4.19E-122 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:3.30.559.10 6 181 6.2E-8 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:2.30.38.10 719 797 1.8E-17 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1464 1859 1.2E-103 T 28-03-2018 IPR010071 Amino acid adenylation domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 439 831 5.4E-119 T 28-03-2018 IPR010071 Amino acid adenylation domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:3.30.559.10 982 1172 1.9E-28 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 ProSitePatterns PS00012 Phosphopantetheine attachment site. 936 951 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:3.40.50.980 1567 1751 1.3E-33 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1965 1980 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 ProSitePatterns PS00455 Putative AMP-binding domain signature. 556 567 - T 28-03-2018 IPR020845 AMP-binding, conserved site RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Pfam PF13193 AMP-binding enzyme C-terminal domain 1843 1914 1.6E-7 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Pfam PF13193 AMP-binding enzyme C-terminal domain 815 887 1.3E-5 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 SUPERFAMILY SSF52777 999 1161 4.34E-33 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 TIGRFAM TIGR01746 Thioester-redct: thioester reductase domain 2047 2389 1.1E-97 T 28-03-2018 IPR010080 Thioester reductase-like domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 SUPERFAMILY SSF52777 8 155 1.85E-10 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 SUPERFAMILY SSF52777 1163 1421 2.0E-51 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:1.10.1200.10 1947 2012 3.2E-17 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Gene3D G3DSA:2.30.38.10 1752 1828 2.4E-19 T 28-03-2018 RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Pfam PF00668 Condensation domain 9 154 2.1E-8 T 28-03-2018 IPR001242 Condensation domain RK98_RS05405 0c33d91918cef744ecc662792408ae5a 2391 Pfam PF00668 Condensation domain 994 1404 5.9E-90 T 28-03-2018 IPR001242 Condensation domain RK98_RS05305 ab4f8f59a8e35003460f049a9f89c0e6 226 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS05305 ab4f8f59a8e35003460f049a9f89c0e6 226 SUPERFAMILY SSF52540 1 222 1.39E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05305 ab4f8f59a8e35003460f049a9f89c0e6 226 Gene3D G3DSA:3.40.50.300 1 225 3.1E-62 T 28-03-2018 RK98_RS05305 ab4f8f59a8e35003460f049a9f89c0e6 226 SMART SM00382 30 218 3.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS05305 ab4f8f59a8e35003460f049a9f89c0e6 226 Pfam PF00005 ABC transporter 21 169 1.3E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS04665 9b7f1b61b263f46ad377e06590a91407 266 SUPERFAMILY SSF53697 84 246 1.44E-35 T 28-03-2018 RK98_RS04665 9b7f1b61b263f46ad377e06590a91407 266 Pfam PF01380 SIS domain 115 239 1.7E-15 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 RK98_RS04665 9b7f1b61b263f46ad377e06590a91407 266 Gene3D G3DSA:1.10.10.10 1 71 3.8E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04665 9b7f1b61b263f46ad377e06590a91407 266 Gene3D G3DSA:3.40.50.10490 72 258 2.2E-33 T 28-03-2018 RK98_RS04665 9b7f1b61b263f46ad377e06590a91407 266 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 75 4.4E-13 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RK98_RS04665 9b7f1b61b263f46ad377e06590a91407 266 SUPERFAMILY SSF46689 1 76 1.63E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1057 13.39 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Gene3D G3DSA:3.40.50.1380 920 1048 2.0E-33 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Gene3D G3DSA:3.30.470.20 129 401 1.9E-63 T 28-03-2018 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 SUPERFAMILY SSF52335 929 1052 1.57E-30 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 SMART SM01096 420 540 7.4E-68 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1056 13.077 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Gene3D G3DSA:3.40.50.20 4 128 1.9E-36 T 28-03-2018 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 SUPERFAMILY SSF52440 1 127 1.01E-48 T 28-03-2018 IPR016185 Pre-ATP-grasp domain RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Pfam PF02142 MGS-like domain 949 1035 3.7E-19 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 SUPERFAMILY SSF48108 395 546 6.02E-52 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 866 2.1E-40 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 5.6E-79 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Gene3D G3DSA:1.10.1030.10 405 531 6.3E-49 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 SMART SM01209 672 836 1.7E-4 T 28-03-2018 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1045 0.0 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Gene3D G3DSA:3.30.470.20 738 919 1.3E-40 T 28-03-2018 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Gene3D G3DSA:3.40.50.20 532 647 1.1E-59 T 28-03-2018 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.2E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 4.2E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.2E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.2E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.2E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 4.2E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.2E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Gene3D G3DSA:3.30.1490.20 648 737 5.4E-24 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 SUPERFAMILY SSF56059 666 926 3.7E-101 T 28-03-2018 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 SUPERFAMILY SSF52440 549 668 1.34E-48 T 28-03-2018 IPR016185 Pre-ATP-grasp domain RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 SMART SM00851 949 1035 5.8E-25 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 1.3E-40 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12410 fa45874fea83aa343e886546412d20b4 1057 SUPERFAMILY SSF56059 128 399 5.66E-106 T 28-03-2018 RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 Gene3D G3DSA:3.40.50.720 3 159 5.8E-48 T 28-03-2018 RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 5.9E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 5.9E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 5.9E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.9E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 5.9E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 5.9E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 Gene3D G3DSA:3.40.50.720 160 229 1.6E-16 T 28-03-2018 RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.6E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.6E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.6E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 SUPERFAMILY SSF51735 4 228 2.83E-70 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS07625 a1a1f37946cc8ef17c1b482665d0dc8d 231 Pfam PF00106 short chain dehydrogenase 7 196 1.6E-57 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12580 9068720a5ef9bd23afc36258b1786960 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 7 104 4.4E-42 T 28-03-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like RK98_RS12580 9068720a5ef9bd23afc36258b1786960 110 SUPERFAMILY SSF88659 5 108 1.42E-33 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS12580 9068720a5ef9bd23afc36258b1786960 110 Gene3D G3DSA:1.10.10.10 1 110 1.3E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS12580 9068720a5ef9bd23afc36258b1786960 110 Hamap MF_00245 UPF0122 protein . 6 103 22.523 T 28-03-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like RK98_RS03720 f249f93d1058771a1f4e9655e89d7a28 445 SUPERFAMILY SSF55904 308 438 1.57E-23 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RK98_RS03720 f249f93d1058771a1f4e9655e89d7a28 445 Gene3D G3DSA:3.90.100.10 357 444 7.4E-17 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RK98_RS03720 f249f93d1058771a1f4e9655e89d7a28 445 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 4 262 5.3E-39 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 RK98_RS03720 f249f93d1058771a1f4e9655e89d7a28 445 Gene3D G3DSA:3.90.1150.10 242 356 3.2E-7 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS03720 f249f93d1058771a1f4e9655e89d7a28 445 Gene3D G3DSA:3.40.640.10 39 241 1.0E-26 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS03720 f249f93d1058771a1f4e9655e89d7a28 445 SUPERFAMILY SSF53383 4 338 9.11E-58 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS03720 f249f93d1058771a1f4e9655e89d7a28 445 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 379 426 7.4E-8 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 RK98_RS03535 82ebbac230e50af18e488cf27940c4cf 158 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 132 1.0E-44 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 RK98_RS03535 82ebbac230e50af18e488cf27940c4cf 158 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 1.2E-36 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 RK98_RS03535 82ebbac230e50af18e488cf27940c4cf 158 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 RK98_RS03535 82ebbac230e50af18e488cf27940c4cf 158 SUPERFAMILY SSF55083 1 147 5.23E-52 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 RK98_RS03535 82ebbac230e50af18e488cf27940c4cf 158 Gene3D G3DSA:3.30.70.560 1 153 1.5E-57 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF00746 LPXTG cell wall anchor motif 1076 1115 9.5E-6 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 SMART SM01208 421 501 1.6E-15 T 28-03-2018 IPR011098 G5 domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 SMART SM01208 805 885 1.3E-15 T 28-03-2018 IPR011098 G5 domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 SMART SM01208 933 1013 5.0E-18 T 28-03-2018 IPR011098 G5 domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 SMART SM01208 549 629 4.0E-16 T 28-03-2018 IPR011098 G5 domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 SMART SM01208 677 757 6.2E-16 T 28-03-2018 IPR011098 G5 domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Gene3D G3DSA:2.60.120.200 150 396 1.2E-5 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Gene3D G3DSA:2.20.230.10 807 881 1.3E-17 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Gene3D G3DSA:2.20.230.10 883 934 0.038 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Gene3D G3DSA:2.20.230.10 626 678 0.0032 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Gene3D G3DSA:2.20.230.10 755 806 0.0094 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Gene3D G3DSA:2.20.230.10 422 497 2.0E-16 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Gene3D G3DSA:2.20.230.10 935 1009 1.0E-21 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Gene3D G3DSA:2.20.230.10 551 625 2.8E-17 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Gene3D G3DSA:2.20.230.10 498 550 0.0032 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Gene3D G3DSA:2.20.230.10 679 753 3.8E-17 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1082 1115 4.3E-5 T 28-03-2018 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF07501 G5 domain 683 755 1.0E-11 T 28-03-2018 IPR011098 G5 domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF07501 G5 domain 555 627 7.2E-12 T 28-03-2018 IPR011098 G5 domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF07501 G5 domain 811 882 1.2E-11 T 28-03-2018 IPR011098 G5 domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF07501 G5 domain 426 499 5.2E-11 T 28-03-2018 IPR011098 G5 domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF07501 G5 domain 939 1010 7.7E-14 T 28-03-2018 IPR011098 G5 domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF17041 E domain 757 804 4.4E-28 T 28-03-2018 IPR031477 E domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF17041 E domain 885 932 1.2E-27 T 28-03-2018 IPR031477 E domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF17041 E domain 629 676 6.1E-28 T 28-03-2018 IPR031477 E domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF17041 E domain 501 548 6.1E-28 T 28-03-2018 IPR031477 E domain RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 16 52 1.0E-12 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS07515 c87a4609dfcda82dfd7afa445c61d592 1115 Pfam PF04650 YSIRK type signal peptide 17 41 1.5E-11 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS04480 eb87bccb98b6f72980ae26305f46fcc4 280 SMART SM00382 30 208 2.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS04480 eb87bccb98b6f72980ae26305f46fcc4 280 SUPERFAMILY SSF52540 3 225 2.75E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04480 eb87bccb98b6f72980ae26305f46fcc4 280 Pfam PF00005 ABC transporter 21 160 1.7E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS04480 eb87bccb98b6f72980ae26305f46fcc4 280 Gene3D G3DSA:3.40.50.300 1 266 6.0E-44 T 28-03-2018 RK98_RS10175 23579cfec5e4d7520549e527892703c6 105 Pfam PF12728 Helix-turn-helix domain 32 80 1.5E-10 T 28-03-2018 RK98_RS10175 23579cfec5e4d7520549e527892703c6 105 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 32 80 6.4E-20 T 28-03-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 RK98_RS10175 23579cfec5e4d7520549e527892703c6 105 Gene3D G3DSA:1.10.10.10 32 88 7.5E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14270 67582d7ecfff77bb5dfdc743e31aed74 328 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 6 327 1.3E-149 T 28-03-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 RK98_RS14270 67582d7ecfff77bb5dfdc743e31aed74 328 Gene3D G3DSA:3.30.420.40 126 325 2.3E-52 T 28-03-2018 RK98_RS14270 67582d7ecfff77bb5dfdc743e31aed74 328 ProSitePatterns PS01125 ROK family signature. 140 167 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 RK98_RS14270 67582d7ecfff77bb5dfdc743e31aed74 328 SUPERFAMILY SSF53067 4 319 3.39E-64 T 28-03-2018 RK98_RS14270 67582d7ecfff77bb5dfdc743e31aed74 328 Pfam PF00480 ROK family 7 319 3.2E-65 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 RK98_RS14270 67582d7ecfff77bb5dfdc743e31aed74 328 Gene3D G3DSA:3.30.420.40 1 125 7.9E-26 T 28-03-2018 RK98_RS09910 4b4addf1a9919996144db360befb5027 120 Gene3D G3DSA:2.30.30.110 1 115 1.4E-39 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RK98_RS09910 4b4addf1a9919996144db360befb5027 120 SUPERFAMILY SSF50118 1 112 1.64E-40 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RK98_RS09910 4b4addf1a9919996144db360befb5027 120 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 109 1.2E-33 T 28-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 RK98_RS09910 4b4addf1a9919996144db360befb5027 120 PIRSF PIRSF033490 1 112 1.0E-38 T 28-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 RK98_RS05380 759d4dc1365b9af1a08517aea580128f 343 SUPERFAMILY SSF55347 147 311 4.25E-59 T 28-03-2018 RK98_RS05380 759d4dc1365b9af1a08517aea580128f 343 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 142 158 - T 28-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RK98_RS05380 759d4dc1365b9af1a08517aea580128f 343 Gene3D G3DSA:3.30.360.10 157 311 1.3E-61 T 28-03-2018 RK98_RS05380 759d4dc1365b9af1a08517aea580128f 343 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 156 314 2.1E-28 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RK98_RS05380 759d4dc1365b9af1a08517aea580128f 343 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 132 9.4E-26 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RK98_RS05380 759d4dc1365b9af1a08517aea580128f 343 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 337 40.708 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RK98_RS05380 759d4dc1365b9af1a08517aea580128f 343 SMART SM00859 3 139 6.2E-35 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RK98_RS05380 759d4dc1365b9af1a08517aea580128f 343 Gene3D G3DSA:3.40.50.720 1 156 1.3E-31 T 28-03-2018 RK98_RS05380 759d4dc1365b9af1a08517aea580128f 343 SUPERFAMILY SSF51735 2 172 8.79E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05380 759d4dc1365b9af1a08517aea580128f 343 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 343 2.8E-132 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RK98_RS02370 2d1684fae8d9f23b215795083d459559 180 Gene3D G3DSA:3.40.50.1000 59 179 2.7E-31 T 28-03-2018 IPR023214 HAD-like domain RK98_RS02370 2d1684fae8d9f23b215795083d459559 180 SUPERFAMILY SSF56784 4 177 5.3E-35 T 28-03-2018 IPR023214 HAD-like domain RK98_RS02370 2d1684fae8d9f23b215795083d459559 180 Gene3D G3DSA:1.10.40.40 18 58 7.9E-16 T 28-03-2018 RK98_RS02370 2d1684fae8d9f23b215795083d459559 180 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 6 174 1.9E-35 T 28-03-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 RK98_RS13345 01ee05a63454574a2183356c0edc9912 420 Gene3D G3DSA:3.40.630.30 169 390 1.0E-28 T 28-03-2018 RK98_RS13345 01ee05a63454574a2183356c0edc9912 420 Pfam PF02388 FemAB family 6 414 2.5E-152 T 28-03-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 RK98_RS13345 01ee05a63454574a2183356c0edc9912 420 SUPERFAMILY SSF46589 245 309 6.8E-18 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 RK98_RS13345 01ee05a63454574a2183356c0edc9912 420 Gene3D G3DSA:3.40.630.30 1 168 1.6E-38 T 28-03-2018 RK98_RS13345 01ee05a63454574a2183356c0edc9912 420 SUPERFAMILY SSF55729 1 165 1.01E-61 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS13345 01ee05a63454574a2183356c0edc9912 420 SUPERFAMILY SSF55729 310 411 6.36E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS13345 01ee05a63454574a2183356c0edc9912 420 SUPERFAMILY SSF55729 167 245 6.36E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 Gene3D G3DSA:3.20.20.470 171 340 1.9E-37 T 28-03-2018 RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 Gene3D G3DSA:3.20.20.470 1 104 1.2E-35 T 28-03-2018 RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 Pfam PF16657 Maltogenic Amylase, C-terminal domain 476 523 2.7E-8 T 28-03-2018 IPR032091 Maltogenic Amylase, C-terminal RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 SUPERFAMILY SSF51011 476 547 1.94E-14 T 28-03-2018 RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 SUPERFAMILY SSF51445 4 471 1.11E-148 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 Gene3D G3DSA:3.90.400.10 105 170 6.1E-30 T 28-03-2018 RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 Pfam PF00128 Alpha amylase, catalytic domain 28 372 3.4E-114 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 Gene3D G3DSA:3.20.20.80 341 472 1.2E-22 T 28-03-2018 RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 PRINTS PR00110 Alpha-amylase signature 194 205 1.8E-5 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 PRINTS PR00110 Alpha-amylase signature 316 328 1.8E-5 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 PRINTS PR00110 Alpha-amylase signature 92 103 1.8E-5 T 28-03-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 SMART SM00642 13 415 3.0E-153 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RK98_RS14060 697eb77db3e6e16e0a568b65ed46568c 549 Gene3D G3DSA:2.60.40.1180 477 549 2.3E-15 T 28-03-2018 RK98_RS10955 232c75c71fb24e32801e4514d97324c6 485 Gene3D G3DSA:2.30.38.10 297 380 1.9E-11 T 28-03-2018 RK98_RS10955 232c75c71fb24e32801e4514d97324c6 485 Pfam PF00501 AMP-binding enzyme 9 386 2.9E-71 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RK98_RS10955 232c75c71fb24e32801e4514d97324c6 485 Gene3D G3DSA:3.40.50.980 2 143 1.4E-26 T 28-03-2018 RK98_RS10955 232c75c71fb24e32801e4514d97324c6 485 Gene3D G3DSA:3.30.300.30 381 484 2.9E-27 T 28-03-2018 RK98_RS10955 232c75c71fb24e32801e4514d97324c6 485 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 29 411 6.9E-96 T 28-03-2018 IPR010071 Amino acid adenylation domain RK98_RS10955 232c75c71fb24e32801e4514d97324c6 485 Pfam PF13193 AMP-binding enzyme C-terminal domain 395 473 1.8E-10 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain RK98_RS10955 232c75c71fb24e32801e4514d97324c6 485 Hamap MF_00593 D-alanine--poly(phosphoribitol) ligase subunit 1 [dltA]. 1 485 217.426 T 28-03-2018 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13 RK98_RS10955 232c75c71fb24e32801e4514d97324c6 485 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 3 484 4.4E-226 T 28-03-2018 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13 RK98_RS10955 232c75c71fb24e32801e4514d97324c6 485 Gene3D G3DSA:3.40.50.980 144 296 1.6E-34 T 28-03-2018 RK98_RS10955 232c75c71fb24e32801e4514d97324c6 485 SUPERFAMILY SSF56801 4 483 7.98E-112 T 28-03-2018 RK98_RS01600 6c921477618ccaa00a12ff2538ee6c47 58 Pfam PF16935 Putative Holin-like Toxin (Hol-Tox) 10 58 2.0E-8 T 28-03-2018 IPR031616 Putative Holin-like Toxin (Hol-Tox) RK98_RS06560 5779aa3e8fb201ea4e8dfb29d65f1b67 290 SUPERFAMILY SSF88713 74 285 5.0E-36 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RK98_RS06560 5779aa3e8fb201ea4e8dfb29d65f1b67 290 Gene3D G3DSA:3.20.20.370 32 285 3.6E-40 T 28-03-2018 RK98_RS06560 5779aa3e8fb201ea4e8dfb29d65f1b67 290 TIGRFAM TIGR03933 PIA_icaB: intercellular adhesin biosynthesis polysaccharide N-deacetylase 43 287 5.1E-138 T 28-03-2018 IPR023872 Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase GO:0016811 RK98_RS06560 5779aa3e8fb201ea4e8dfb29d65f1b67 290 Pfam PF01522 Polysaccharide deacetylase 109 248 3.0E-30 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 315 3.8E-33 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 SUPERFAMILY SSF51735 103 284 2.39E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 Gene3D G3DSA:3.30.1330.90 320 450 1.9E-25 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 SUPERFAMILY SSF143548 324 452 8.37E-26 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 146 173 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 Gene3D G3DSA:3.30.70.260 451 525 1.5E-15 T 28-03-2018 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 SUPERFAMILY SSF52283 3 127 1.63E-33 T 28-03-2018 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 Pfam PF01842 ACT domain 463 520 2.9E-9 T 28-03-2018 IPR002912 ACT domain RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 Gene3D G3DSA:3.40.50.720 115 286 1.9E-57 T 28-03-2018 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 SUPERFAMILY SSF55021 446 524 1.44E-16 T 28-03-2018 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 Gene3D G3DSA:3.40.50.720 3 114 6.6E-32 T 28-03-2018 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 283 5.5E-63 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RK98_RS00165 26b99316d602c83ff2ed83c3427a778f 534 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 5 530 3.3E-225 T 28-03-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 RK98_RS00445 9ac9ea82b0c367a475a35ae05421b8e3 156 SUPERFAMILY SSF46894 90 152 1.21E-8 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RK98_RS00445 9ac9ea82b0c367a475a35ae05421b8e3 156 Gene3D G3DSA:1.10.10.10 94 156 5.5E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS00445 9ac9ea82b0c367a475a35ae05421b8e3 156 Gene3D G3DSA:1.10.1740.10 2 72 1.1E-8 T 28-03-2018 RK98_RS00445 9ac9ea82b0c367a475a35ae05421b8e3 156 SUPERFAMILY SSF88946 3 78 1.61E-5 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS00445 9ac9ea82b0c367a475a35ae05421b8e3 156 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 153 4.4E-17 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS00445 9ac9ea82b0c367a475a35ae05421b8e3 156 Pfam PF04542 Sigma-70 region 2 7 73 1.7E-6 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS00445 9ac9ea82b0c367a475a35ae05421b8e3 156 Pfam PF00196 Bacterial regulatory proteins, luxR family 109 150 5.8E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 Pfam PF03129 Anticodon binding domain 372 459 2.1E-23 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS14360 041051bfb578786a07f43773f87a365f 463 Gene3D G3DSA:3.30.930.10 236 357 9.4E-43 T 28-03-2018 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 Gene3D G3DSA:3.30.930.10 2 104 7.8E-22 T 28-03-2018 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 Gene3D G3DSA:3.30.930.10 123 235 6.3E-33 T 28-03-2018 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 SUPERFAMILY SSF52954 359 462 1.09E-33 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS14360 041051bfb578786a07f43773f87a365f 463 SUPERFAMILY SSF55681 4 375 7.28E-126 T 28-03-2018 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 2 462 50.856 T 28-03-2018 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 164 285 2.3E-9 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 5 237 8.7E-88 T 28-03-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 Gene3D G3DSA:3.40.50.800 358 462 4.1E-28 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS14360 041051bfb578786a07f43773f87a365f 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 326 338 3.9E-53 T 28-03-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 149 161 3.9E-53 T 28-03-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 407 426 3.9E-53 T 28-03-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 219 229 3.9E-53 T 28-03-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 24 38 3.9E-53 T 28-03-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 170 187 3.9E-53 T 28-03-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS14360 041051bfb578786a07f43773f87a365f 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 202 219 3.9E-53 T 28-03-2018 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS03120 bf3c0af5dd9b47a55dc2209191ff3e57 218 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 2 207 4.8E-79 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RK98_RS03120 bf3c0af5dd9b47a55dc2209191ff3e57 218 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 13 214 38.408 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RK98_RS03120 bf3c0af5dd9b47a55dc2209191ff3e57 218 SMART SM00986 44 203 6.0E-38 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RK98_RS03120 bf3c0af5dd9b47a55dc2209191ff3e57 218 SMART SM00987 44 203 6.0E-38 T 28-03-2018 RK98_RS03120 bf3c0af5dd9b47a55dc2209191ff3e57 218 Gene3D G3DSA:3.40.470.10 1 218 5.5E-96 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RK98_RS03120 bf3c0af5dd9b47a55dc2209191ff3e57 218 SUPERFAMILY SSF52141 2 213 8.29E-89 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RK98_RS03120 bf3c0af5dd9b47a55dc2209191ff3e57 218 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 52 61 - T 28-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RK98_RS03120 bf3c0af5dd9b47a55dc2209191ff3e57 218 Pfam PF03167 Uracil DNA glycosylase superfamily 48 202 4.0E-26 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 RK98_RS08120 5b28f68d7fe2cbe327fdeaa6d073d0ea 519 Gene3D G3DSA:3.30.70.20 237 366 3.3E-26 T 28-03-2018 RK98_RS08120 5b28f68d7fe2cbe327fdeaa6d073d0ea 519 Gene3D G3DSA:3.30.70.20 5 198 4.8E-29 T 28-03-2018 RK98_RS08120 5b28f68d7fe2cbe327fdeaa6d073d0ea 519 Gene3D G3DSA:3.30.70.20 199 236 3.9E-18 T 28-03-2018 RK98_RS08120 5b28f68d7fe2cbe327fdeaa6d073d0ea 519 SUPERFAMILY SSF54862 2 489 5.76E-162 T 28-03-2018 RK98_RS08120 5b28f68d7fe2cbe327fdeaa6d073d0ea 519 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 490 1.6E-252 T 28-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RK98_RS08120 5b28f68d7fe2cbe327fdeaa6d073d0ea 519 Gene3D G3DSA:1.10.3650.10 367 437 8.0E-28 T 28-03-2018 RK98_RS08120 5b28f68d7fe2cbe327fdeaa6d073d0ea 519 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 359 439 6.1E-29 T 28-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 RK98_RS08120 5b28f68d7fe2cbe327fdeaa6d073d0ea 519 Pfam PF13247 4Fe-4S dicluster domain 176 272 2.7E-36 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RK98_RS04180 9ddb58f2342432d992de0f3073114826 131 Pfam PF12648 TcpE family 6 105 2.5E-31 T 28-03-2018 IPR025608 TcpE family RK98_RS13835 1d136cbb2c157a23606f946039170013 388 PIRSF PIRSF001456 1 380 3.5E-124 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RK98_RS13835 1d136cbb2c157a23606f946039170013 388 Hamap MF_00300 Chorismate synthase [aroC]. 1 370 34.348 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RK98_RS13835 1d136cbb2c157a23606f946039170013 388 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RK98_RS13835 1d136cbb2c157a23606f946039170013 388 ProSitePatterns PS00789 Chorismate synthase signature 3. 337 353 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RK98_RS13835 1d136cbb2c157a23606f946039170013 388 TIGRFAM TIGR00033 aroC: chorismate synthase 1 368 3.8E-122 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RK98_RS13835 1d136cbb2c157a23606f946039170013 388 SUPERFAMILY SSF103263 1 383 5.63E-139 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RK98_RS13835 1d136cbb2c157a23606f946039170013 388 Pfam PF01264 Chorismate synthase 1 363 6.4E-118 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RK98_RS13835 1d136cbb2c157a23606f946039170013 388 Gene3D G3DSA:3.60.150.10 1 387 1.5E-132 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RK98_RS13835 1d136cbb2c157a23606f946039170013 388 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 SMART SM00846 3 153 2.6E-70 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 159 311 1.1E-64 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 PIRSF PIRSF000149 1 332 2.9E-123 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 Gene3D G3DSA:3.40.50.720 1 162 1.3E-63 T 28-03-2018 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 SUPERFAMILY SSF55347 153 312 3.87E-65 T 28-03-2018 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 3.2E-124 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 SUPERFAMILY SSF51735 1 152 2.1E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 Gene3D G3DSA:3.30.360.10 163 313 2.0E-62 T 28-03-2018 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 2.7E-36 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 2.7E-36 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.7E-36 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 2.7E-36 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 2.7E-36 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS15005 cb00d7a3da9186d49fe07c29d71085bd 341 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 101 3.2E-34 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS12825 dff8cd695f31b53dcc3fcefa227df052 275 SUPERFAMILY SSF55021 9 61 4.58E-6 T 28-03-2018 RK98_RS12825 dff8cd695f31b53dcc3fcefa227df052 275 PIRSF PIRSF021288 4 275 1.4E-153 T 28-03-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain RK98_RS12825 dff8cd695f31b53dcc3fcefa227df052 275 Pfam PF11868 Protein of unknown function (DUF3388) 75 261 3.8E-99 T 28-03-2018 IPR024514 Domain of unknown function DUF3388 RK98_RS12825 dff8cd695f31b53dcc3fcefa227df052 275 Gene3D G3DSA:3.30.70.260 1 76 3.5E-4 T 28-03-2018 RK98_RS10010 17cc09de5a0e75c1a0786e205b151cef 84 SUPERFAMILY SSF55021 2 76 7.63E-13 T 28-03-2018 RK98_RS10010 17cc09de5a0e75c1a0786e205b151cef 84 Pfam PF13291 ACT domain 5 75 3.4E-7 T 28-03-2018 IPR002912 ACT domain RK98_RS10010 17cc09de5a0e75c1a0786e205b151cef 84 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 79 2.0E-39 T 28-03-2018 RK98_RS10010 17cc09de5a0e75c1a0786e205b151cef 84 Gene3D G3DSA:3.30.70.260 2 82 9.9E-13 T 28-03-2018 RK98_RS07195 e66558f711a2c9aa4ee9b1c33bc41786 514 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 514 75.158 T 28-03-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 RK98_RS07195 e66558f711a2c9aa4ee9b1c33bc41786 514 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 514 2.4E-225 T 28-03-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 RK98_RS07195 e66558f711a2c9aa4ee9b1c33bc41786 514 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RK98_RS07195 e66558f711a2c9aa4ee9b1c33bc41786 514 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RK98_RS07195 e66558f711a2c9aa4ee9b1c33bc41786 514 Pfam PF00171 Aldehyde dehydrogenase family 50 510 3.6E-156 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RK98_RS07195 e66558f711a2c9aa4ee9b1c33bc41786 514 SUPERFAMILY SSF53720 4 510 1.07E-152 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RK98_RS07195 e66558f711a2c9aa4ee9b1c33bc41786 514 Gene3D G3DSA:3.40.309.10 302 489 3.9E-63 T 28-03-2018 RK98_RS07195 e66558f711a2c9aa4ee9b1c33bc41786 514 Gene3D G3DSA:3.40.605.10 22 301 2.3E-80 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RK98_RS06655 21bd084273506de714a5805a64307603 796 TIGRFAM TIGR03714 secA2: accessory Sec system translocase SecA2 9 771 0.0 T 28-03-2018 IPR022490 Protein translocase subunit SecA2 GO:0015031|GO:0015450 RK98_RS06655 21bd084273506de714a5805a64307603 796 Pfam PF01043 SecA preprotein cross-linking domain 235 342 6.4E-26 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RK98_RS06655 21bd084273506de714a5805a64307603 796 SUPERFAMILY SSF52540 402 566 1.77E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06655 21bd084273506de714a5805a64307603 796 Gene3D G3DSA:3.40.50.300 7 273 2.2E-42 T 28-03-2018 RK98_RS06655 21bd084273506de714a5805a64307603 796 Pfam PF07516 SecA Wing and Scaffold domain 580 780 3.2E-24 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RK98_RS06655 21bd084273506de714a5805a64307603 796 SMART SM00957 2 386 2.1E-195 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RK98_RS06655 21bd084273506de714a5805a64307603 796 Hamap MF_01382 Protein translocase subunit SecA [secA]. 1 784 15.455 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS06655 21bd084273506de714a5805a64307603 796 SUPERFAMILY SSF52540 4 229 6.45E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06655 21bd084273506de714a5805a64307603 796 SUPERFAMILY SSF52540 508 549 6.45E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06655 21bd084273506de714a5805a64307603 796 SMART SM00958 230 342 1.7E-38 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RK98_RS06655 21bd084273506de714a5805a64307603 796 PRINTS PR00906 SecA protein signature 172 192 5.2E-53 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS06655 21bd084273506de714a5805a64307603 796 PRINTS PR00906 SecA protein signature 397 410 5.2E-53 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS06655 21bd084273506de714a5805a64307603 796 PRINTS PR00906 SecA protein signature 360 377 5.2E-53 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS06655 21bd084273506de714a5805a64307603 796 PRINTS PR00906 SecA protein signature 60 84 5.2E-53 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS06655 21bd084273506de714a5805a64307603 796 PRINTS PR00906 SecA protein signature 98 112 5.2E-53 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS06655 21bd084273506de714a5805a64307603 796 PRINTS PR00906 SecA protein signature 114 124 5.2E-53 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS06655 21bd084273506de714a5805a64307603 796 PRINTS PR00906 SecA protein signature 323 345 5.2E-53 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS06655 21bd084273506de714a5805a64307603 796 Pfam PF07517 SecA DEAD-like domain 9 385 1.5E-101 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RK98_RS06655 21bd084273506de714a5805a64307603 796 SUPERFAMILY SSF81767 229 351 1.7E-35 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RK98_RS06655 21bd084273506de714a5805a64307603 796 Gene3D G3DSA:1.10.3060.10 618 783 9.1E-22 T 28-03-2018 RK98_RS06655 21bd084273506de714a5805a64307603 796 SUPERFAMILY SSF81886 580 795 1.14E-41 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RK98_RS06655 21bd084273506de714a5805a64307603 796 Gene3D G3DSA:3.40.50.300 401 617 1.1E-28 T 28-03-2018 RK98_RS11240 901b58862161c37cd5261e9fa554d1fe 551 PIRSF PIRSF002741 1 541 5.4E-91 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RK98_RS11240 901b58862161c37cd5261e9fa554d1fe 551 Gene3D G3DSA:3.40.190.10 202 296 8.3E-17 T 28-03-2018 RK98_RS11240 901b58862161c37cd5261e9fa554d1fe 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 76 459 1.2E-73 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain RK98_RS11240 901b58862161c37cd5261e9fa554d1fe 551 SUPERFAMILY SSF53850 30 534 9.23E-111 T 28-03-2018 RK98_RS11240 901b58862161c37cd5261e9fa554d1fe 551 Gene3D G3DSA:3.10.105.10 297 510 3.7E-46 T 28-03-2018 RK98_RS11240 901b58862161c37cd5261e9fa554d1fe 551 Gene3D G3DSA:3.90.76.10 42 201 5.6E-33 T 28-03-2018 RK98_RS11995 ecd048e26f07932dbcb7373e9eec0aa9 292 Gene3D G3DSA:3.40.50.1980 128 289 7.0E-34 T 28-03-2018 RK98_RS11995 ecd048e26f07932dbcb7373e9eec0aa9 292 TIGRFAM TIGR03659 IsdE: heme ABC transporter, heme-binding protein isdE 4 288 4.3E-124 T 28-03-2018 IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE GO:0015886|GO:0016020|GO:0020037 RK98_RS11995 ecd048e26f07932dbcb7373e9eec0aa9 292 Gene3D G3DSA:3.40.50.1980 24 127 5.9E-12 T 28-03-2018 RK98_RS11995 ecd048e26f07932dbcb7373e9eec0aa9 292 Pfam PF01497 Periplasmic binding protein 38 265 2.5E-40 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RK98_RS11995 ecd048e26f07932dbcb7373e9eec0aa9 292 SUPERFAMILY SSF53807 35 290 1.45E-51 T 28-03-2018 RK98_RS04495 1bdaac7883dc3f632ac7dfca05e1424a 129 ProDom PD021249 YDFO YCGX ENVELOPE CYTOPLASMIC STY1988 CP-933X ECS1626 YBCV PROPHAGE 58 125 0.001 T 28-03-2018 IPR009833 Uncharacterised protein DUF1398 RK98_RS04495 1bdaac7883dc3f632ac7dfca05e1424a 129 SUPERFAMILY SSF160419 3 128 3.01E-43 T 28-03-2018 IPR009833 Uncharacterised protein DUF1398 RK98_RS04495 1bdaac7883dc3f632ac7dfca05e1424a 129 Gene3D G3DSA:3.30.1810.10 4 125 2.1E-33 T 28-03-2018 IPR009833 Uncharacterised protein DUF1398 RK98_RS04495 1bdaac7883dc3f632ac7dfca05e1424a 129 Pfam PF07166 Protein of unknown function (DUF1398) 14 125 9.0E-27 T 28-03-2018 IPR009833 Uncharacterised protein DUF1398 RK98_RS00295 3dac24d8919ff94dff8de5bf4f57344c 358 Gene3D G3DSA:2.40.30.40 75 163 7.3E-24 T 28-03-2018 IPR023367 Peptidase M42, domain 2 RK98_RS00295 3dac24d8919ff94dff8de5bf4f57344c 358 SUPERFAMILY SSF53187 9 85 1.26E-65 T 28-03-2018 RK98_RS00295 3dac24d8919ff94dff8de5bf4f57344c 358 SUPERFAMILY SSF53187 174 354 1.26E-65 T 28-03-2018 RK98_RS00295 3dac24d8919ff94dff8de5bf4f57344c 358 PIRSF PIRSF001123 5 358 1.9E-139 T 28-03-2018 IPR008007 Peptidase M42 RK98_RS00295 3dac24d8919ff94dff8de5bf4f57344c 358 SUPERFAMILY SSF101821 75 182 8.39E-27 T 28-03-2018 RK98_RS00295 3dac24d8919ff94dff8de5bf4f57344c 358 Gene3D G3DSA:3.40.630.10 164 357 3.8E-39 T 28-03-2018 RK98_RS00295 3dac24d8919ff94dff8de5bf4f57344c 358 Pfam PF05343 M42 glutamyl aminopeptidase 49 339 3.9E-98 T 28-03-2018 IPR008007 Peptidase M42 RK98_RS08690 85afdd5e67a8c17228ae1b8183ae11b9 150 Gene3D G3DSA:3.30.70.790 77 149 8.6E-23 T 28-03-2018 RK98_RS08690 85afdd5e67a8c17228ae1b8183ae11b9 150 Pfam PF05194 UreE urease accessory protein, C-terminal domain 78 137 7.0E-10 T 28-03-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RK98_RS08690 85afdd5e67a8c17228ae1b8183ae11b9 150 Gene3D G3DSA:2.60.260.20 1 75 1.2E-25 T 28-03-2018 RK98_RS08690 85afdd5e67a8c17228ae1b8183ae11b9 150 SUPERFAMILY SSF69737 78 143 2.75E-18 T 28-03-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 RK98_RS08690 85afdd5e67a8c17228ae1b8183ae11b9 150 SMART SM00988 6 71 1.5E-16 T 28-03-2018 IPR004029 UreE urease accessory, N-terminal RK98_RS08690 85afdd5e67a8c17228ae1b8183ae11b9 150 SUPERFAMILY SSF69287 1 75 9.42E-20 T 28-03-2018 IPR004029 UreE urease accessory, N-terminal RK98_RS08690 85afdd5e67a8c17228ae1b8183ae11b9 150 Pfam PF02814 UreE urease accessory protein, N-terminal domain 17 71 2.9E-17 T 28-03-2018 IPR004029 UreE urease accessory, N-terminal RK98_RS08690 85afdd5e67a8c17228ae1b8183ae11b9 150 PIRSF PIRSF036402 1 150 7.2E-48 T 28-03-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 RK98_RS08690 85afdd5e67a8c17228ae1b8183ae11b9 150 Hamap MF_00822 Urease accessory protein UreE [ureE]. 1 149 23.437 T 28-03-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 RK98_RS11765 5639700868cf4ee4756007b1c821614b 565 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 357 407 1.6E-9 T 28-03-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RK98_RS11765 5639700868cf4ee4756007b1c821614b 565 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 6.6E-17 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS11765 5639700868cf4ee4756007b1c821614b 565 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 554 1.1E-207 T 28-03-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 RK98_RS11765 5639700868cf4ee4756007b1c821614b 565 PIRSF PIRSF004803 1 556 5.1E-237 T 28-03-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 RK98_RS11765 5639700868cf4ee4756007b1c821614b 565 Gene3D G3DSA:3.60.15.10 2 448 1.2E-57 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS11765 5639700868cf4ee4756007b1c821614b 565 Hamap MF_01491 Ribonuclease J [rnj]. 4 556 46.032 T 28-03-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 RK98_RS11765 5639700868cf4ee4756007b1c821614b 565 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 28-03-2018 IPR001587 Ribonuclease J, conserved site RK98_RS11765 5639700868cf4ee4756007b1c821614b 565 SUPERFAMILY SSF56281 11 423 1.16E-90 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS11765 5639700868cf4ee4756007b1c821614b 565 SMART SM00849 21 215 7.0E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS07765 4f0dcc3cd86eba775b4fee1e2ce4deb3 450 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 176 191 - T 28-03-2018 IPR019826 Carboxylesterase type B, active site RK98_RS07765 4f0dcc3cd86eba775b4fee1e2ce4deb3 450 SUPERFAMILY SSF53474 3 449 1.37E-87 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS07765 4f0dcc3cd86eba775b4fee1e2ce4deb3 450 Gene3D G3DSA:3.40.50.1820 1 450 6.9E-84 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS07765 4f0dcc3cd86eba775b4fee1e2ce4deb3 450 Pfam PF00135 Carboxylesterase family 3 439 1.6E-72 T 28-03-2018 IPR002018 Carboxylesterase, type B RK98_RS07765 4f0dcc3cd86eba775b4fee1e2ce4deb3 450 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 80 90 - T 28-03-2018 IPR019819 Carboxylesterase type B, conserved site RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 458 4.5E-225 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 PRINTS PR00145 Argininosuccinate lyase family signature 131 153 2.2E-6 T 28-03-2018 RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 2.2E-6 T 28-03-2018 RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 2.2E-6 T 28-03-2018 RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 Pfam PF10415 Fumarase C C-terminus 406 458 1.3E-25 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 Pfam PF00206 Lyase 11 340 1.1E-112 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 460 89.926 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 SUPERFAMILY SSF48557 3 458 3.93E-148 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 Gene3D G3DSA:1.20.200.10 137 415 5.7E-84 T 28-03-2018 RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 Gene3D G3DSA:1.10.40.30 416 460 1.5E-26 T 28-03-2018 RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 1.0E-33 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 1.0E-33 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 1.0E-33 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 1.0E-33 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS00885 1a83249164a0ee1e128bddfd2535ea2d 461 Gene3D G3DSA:1.10.275.10 1 136 4.0E-57 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal RK98_RS06350 4f0dbbfd27983c5cdd0dd1c6b84adac6 239 Pfam PF02527 rRNA small subunit methyltransferase G 21 203 4.3E-58 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RK98_RS06350 4f0dbbfd27983c5cdd0dd1c6b84adac6 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 214 8.1E-52 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RK98_RS06350 4f0dbbfd27983c5cdd0dd1c6b84adac6 239 SUPERFAMILY SSF53335 1 236 1.3E-49 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS06350 4f0dbbfd27983c5cdd0dd1c6b84adac6 239 Gene3D G3DSA:3.40.50.150 2 237 5.0E-45 T 28-03-2018 RK98_RS06350 4f0dbbfd27983c5cdd0dd1c6b84adac6 239 PIRSF PIRSF003078 1 219 4.4E-60 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RK98_RS06350 4f0dbbfd27983c5cdd0dd1c6b84adac6 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 213 28.097 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 PRINTS PR01182 Ornithine decarboxylase signature 45 72 7.3E-9 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 PRINTS PR01182 Ornithine decarboxylase signature 358 371 7.3E-9 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 PRINTS PR01182 Ornithine decarboxylase signature 88 112 7.3E-9 T 28-03-2018 IPR002433 Ornithine decarboxylase GO:0006596 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 Gene3D G3DSA:3.20.20.10 26 261 2.5E-50 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 Gene3D G3DSA:2.40.37.10 262 400 3.2E-31 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 ProSitePatterns PS00213 Lipocalin signature. 284 295 - T 28-03-2018 IPR022272 Lipocalin family conserved site RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 178 191 2.2E-9 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 47 65 2.2E-9 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 282 2.2E-9 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 67 79 2.2E-9 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 162 371 1.2E-13 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 29 273 5.7E-36 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 SUPERFAMILY SSF50621 250 394 4.19E-33 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RK98_RS05690 2e500b28c88695fef4af1900bc7f576a 400 SUPERFAMILY SSF51419 27 276 1.6E-60 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS04315 09a6eebbcd7f84cff9d91015feefa474 251 PIRSF PIRSF005426 2 251 1.7E-81 T 28-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 RK98_RS04315 09a6eebbcd7f84cff9d91015feefa474 251 SUPERFAMILY SSF55469 5 249 2.36E-61 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RK98_RS04315 09a6eebbcd7f84cff9d91015feefa474 251 Gene3D G3DSA:3.40.109.10 4 250 8.0E-50 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RK98_RS04315 09a6eebbcd7f84cff9d91015feefa474 251 Pfam PF00881 Nitroreductase family 10 164 1.0E-16 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 RK98_RS04210 e115f0495410ee952902df6e482318d4 28 Pfam PF08076 Tetracycline resistance determinant leader peptide 1 28 9.9E-26 T 28-03-2018 IPR012992 Tetracycline resistance leader peptide, TetM RK98_RS03865 ea30aef523a6087b15279c07e90adac9 301 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 28 46 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RK98_RS03865 ea30aef523a6087b15279c07e90adac9 301 Gene3D G3DSA:3.40.50.1100 129 296 1.2E-43 T 28-03-2018 RK98_RS03865 ea30aef523a6087b15279c07e90adac9 301 Gene3D G3DSA:3.40.50.1100 17 128 7.9E-31 T 28-03-2018 RK98_RS03865 ea30aef523a6087b15279c07e90adac9 301 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 6 282 1.3E-61 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS03865 ea30aef523a6087b15279c07e90adac9 301 SUPERFAMILY SSF53686 4 294 9.69E-82 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS03840 9349bb63cc05e6d990ed1d8179796344 267 Gene3D G3DSA:3.10.350.10 84 153 6.2E-17 T 28-03-2018 RK98_RS03840 9349bb63cc05e6d990ed1d8179796344 267 SUPERFAMILY SSF54001 155 266 3.92E-15 T 28-03-2018 RK98_RS03840 9349bb63cc05e6d990ed1d8179796344 267 Gene3D G3DSA:3.10.350.10 21 83 9.2E-18 T 28-03-2018 RK98_RS03840 9349bb63cc05e6d990ed1d8179796344 267 SUPERFAMILY SSF54106 27 71 1.83E-11 T 28-03-2018 IPR018392 LysM domain RK98_RS03840 9349bb63cc05e6d990ed1d8179796344 267 Pfam PF05257 CHAP domain 160 242 3.1E-13 T 28-03-2018 IPR007921 CHAP domain RK98_RS03840 9349bb63cc05e6d990ed1d8179796344 267 Pfam PF01476 LysM domain 93 134 6.5E-16 T 28-03-2018 IPR018392 LysM domain RK98_RS03840 9349bb63cc05e6d990ed1d8179796344 267 Pfam PF01476 LysM domain 29 70 1.4E-14 T 28-03-2018 IPR018392 LysM domain RK98_RS03840 9349bb63cc05e6d990ed1d8179796344 267 SUPERFAMILY SSF54106 92 134 5.75E-12 T 28-03-2018 IPR018392 LysM domain RK98_RS03840 9349bb63cc05e6d990ed1d8179796344 267 SMART SM00257 28 71 9.8E-17 T 28-03-2018 IPR018392 LysM domain RK98_RS03840 9349bb63cc05e6d990ed1d8179796344 267 SMART SM00257 92 135 2.2E-16 T 28-03-2018 IPR018392 LysM domain RK98_RS10970 0047ca57ec88bff5fad30402b6b8384a 391 Pfam PF04914 DltD protein 41 379 2.2E-102 T 28-03-2018 IPR006998 DltD RK98_RS10970 0047ca57ec88bff5fad30402b6b8384a 391 Gene3D G3DSA:3.40.50.1110 102 390 9.0E-4 T 28-03-2018 RK98_RS10970 0047ca57ec88bff5fad30402b6b8384a 391 SUPERFAMILY SSF52266 287 381 1.28E-6 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain RK98_RS10970 0047ca57ec88bff5fad30402b6b8384a 391 PIRSF PIRSF021438 1 381 2.4E-94 T 28-03-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes RK98_RS10970 0047ca57ec88bff5fad30402b6b8384a 391 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 6 378 3.8E-112 T 28-03-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes RK98_RS02575 fc7ac76ffc5bada2710ed16b2fab198c 543 SMART SM00382 349 524 1.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02575 fc7ac76ffc5bada2710ed16b2fab198c 543 SUPERFAMILY SSF52540 319 527 2.17E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02575 fc7ac76ffc5bada2710ed16b2fab198c 543 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS02575 fc7ac76ffc5bada2710ed16b2fab198c 543 SUPERFAMILY SSF90123 2 305 7.72E-41 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS02575 fc7ac76ffc5bada2710ed16b2fab198c 543 Gene3D G3DSA:3.40.50.300 307 534 4.2E-55 T 28-03-2018 RK98_RS02575 fc7ac76ffc5bada2710ed16b2fab198c 543 Pfam PF00005 ABC transporter 340 477 5.0E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02575 fc7ac76ffc5bada2710ed16b2fab198c 543 Gene3D G3DSA:1.20.1560.10 1 306 6.7E-30 T 28-03-2018 RK98_RS02575 fc7ac76ffc5bada2710ed16b2fab198c 543 Pfam PF00664 ABC transporter transmembrane region 17 263 2.0E-17 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS08060 0628263748f2fcd30e22f02e2aae8fad 88 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 6 81 3.3E-7 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family RK98_RS08060 0628263748f2fcd30e22f02e2aae8fad 88 SUPERFAMILY SSF143011 5 87 6.54E-25 T 28-03-2018 IPR035095 Toxin RelE-like domain RK98_RS08060 0628263748f2fcd30e22f02e2aae8fad 88 Gene3D G3DSA:3.30.2310.20 4 88 9.4E-27 T 28-03-2018 RK98_RS08060 0628263748f2fcd30e22f02e2aae8fad 88 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 8 88 3.7E-38 T 28-03-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 RK98_RS08060 0628263748f2fcd30e22f02e2aae8fad 88 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 8 88 1.7E-31 T 28-03-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 RK98_RS10890 bd5563d9d9017c15329190b0a57b7442 282 Pfam PF01904 Protein of unknown function DUF72 20 264 1.1E-59 T 28-03-2018 IPR002763 Protein of unknown function DUF72 RK98_RS10890 bd5563d9d9017c15329190b0a57b7442 282 SUPERFAMILY SSF117396 1 269 2.35E-80 T 28-03-2018 IPR002763 Protein of unknown function DUF72 RK98_RS10890 bd5563d9d9017c15329190b0a57b7442 282 Gene3D G3DSA:3.20.20.410 1 282 7.0E-80 T 28-03-2018 IPR002763 Protein of unknown function DUF72 RK98_RS03370 c098aff6f6e11f3eed20b92f083c4a7e 189 Pfam PF04542 Sigma-70 region 2 26 92 8.7E-11 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS03370 c098aff6f6e11f3eed20b92f083c4a7e 189 SUPERFAMILY SSF46894 132 182 8.5E-6 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RK98_RS03370 c098aff6f6e11f3eed20b92f083c4a7e 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 22 185 6.9E-15 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS03370 c098aff6f6e11f3eed20b92f083c4a7e 189 Gene3D G3DSA:1.10.1740.10 4 110 2.4E-10 T 28-03-2018 RK98_RS03370 c098aff6f6e11f3eed20b92f083c4a7e 189 Gene3D G3DSA:1.10.10.10 116 188 2.8E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03370 c098aff6f6e11f3eed20b92f083c4a7e 189 SUPERFAMILY SSF88946 20 107 1.46E-14 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 Pfam PF00586 AIR synthase related protein, N-terminal domain 89 194 1.3E-22 T 28-03-2018 IPR016188 PurM-like, N-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 Pfam PF00586 AIR synthase related protein, N-terminal domain 452 557 3.8E-21 T 28-03-2018 IPR016188 PurM-like, N-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 SUPERFAMILY SSF56042 568 726 9.07E-21 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 729 290.421 T 28-03-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 Gene3D G3DSA:3.30.1330.10 22 199 9.9E-53 T 28-03-2018 IPR016188 PurM-like, N-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 724 6.7E-303 T 28-03-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 SUPERFAMILY SSF55326 18 201 3.74E-50 T 28-03-2018 IPR016188 PurM-like, N-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 360 1.4E-32 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 Gene3D G3DSA:3.30.1330.10 414 562 6.6E-43 T 28-03-2018 IPR016188 PurM-like, N-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 SUPERFAMILY SSF56042 204 425 6.28E-53 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 SUPERFAMILY SSF55326 393 562 6.28E-53 T 28-03-2018 IPR016188 PurM-like, N-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 Gene3D G3DSA:3.90.650.10 201 378 1.5E-24 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 Gene3D G3DSA:3.90.650.10 566 727 2.6E-17 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain RK98_RS11660 9b77954cac8a12aff518e852a01676b8 729 PIRSF PIRSF001587 8 728 0.0 T 28-03-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS08555 a6977f80fca9f5906c79a95984df9694 290 SUPERFAMILY SSF53697 101 280 9.34E-31 T 28-03-2018 RK98_RS08555 a6977f80fca9f5906c79a95984df9694 290 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 75 1.9E-19 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RK98_RS08555 a6977f80fca9f5906c79a95984df9694 290 Gene3D G3DSA:3.40.50.10490 79 277 3.3E-28 T 28-03-2018 RK98_RS08555 a6977f80fca9f5906c79a95984df9694 290 Gene3D G3DSA:1.10.10.10 1 78 2.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08555 a6977f80fca9f5906c79a95984df9694 290 Pfam PF01380 SIS domain 126 254 2.1E-17 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 RK98_RS08555 a6977f80fca9f5906c79a95984df9694 290 SUPERFAMILY SSF46689 2 75 9.14E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 Pfam PF00701 Dihydrodipicolinate synthetase family 5 289 1.0E-83 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 Gene3D G3DSA:3.20.20.70 2 293 1.9E-72 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 293 52.153 T 28-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 SUPERFAMILY SSF51569 4 292 1.15E-77 T 28-03-2018 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 SMART SM01130 4 292 1.5E-74 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 PIRSF PIRSF001365 1 292 3.5E-59 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 4.3E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 4.3E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 4.3E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS04675 b92a8d86e6e5b05c62d915464f44119c 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 4.3E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS00320 52158da3a23e907f915ccefc45f79c71 282 Gene3D G3DSA:3.20.10.10 133 281 2.1E-35 T 28-03-2018 RK98_RS00320 52158da3a23e907f915ccefc45f79c71 282 Gene3D G3DSA:3.30.470.10 1 132 9.8E-31 T 28-03-2018 RK98_RS00320 52158da3a23e907f915ccefc45f79c71 282 SUPERFAMILY SSF56752 3 275 4.19E-79 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RK98_RS00320 52158da3a23e907f915ccefc45f79c71 282 Pfam PF01063 Amino-transferase class IV 30 250 5.7E-40 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RK98_RS00320 52158da3a23e907f915ccefc45f79c71 282 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 3 278 1.9E-134 T 28-03-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 RK98_RS00320 52158da3a23e907f915ccefc45f79c71 282 ProSitePatterns PS00770 Aminotransferases class-IV signature. 178 207 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 Pfam PF00288 GHMP kinases N terminal domain 87 152 6.3E-15 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 SUPERFAMILY SSF54211 9 186 9.11E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 Pfam PF08544 GHMP kinases C terminal 219 295 2.2E-11 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 93 104 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 Gene3D G3DSA:3.30.70.890 181 306 1.1E-32 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 SUPERFAMILY SSF55060 167 302 9.71E-31 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 PRINTS PR00959 Mevalonate kinase family signature 91 113 7.9E-18 T 28-03-2018 RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 PRINTS PR00959 Mevalonate kinase family signature 134 153 7.9E-18 T 28-03-2018 RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 PRINTS PR00959 Mevalonate kinase family signature 9 33 7.9E-18 T 28-03-2018 RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 PRINTS PR00959 Mevalonate kinase family signature 262 279 7.9E-18 T 28-03-2018 RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 Gene3D G3DSA:3.30.230.10 54 180 2.3E-27 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 Gene3D G3DSA:3.30.230.10 1 53 1.4E-4 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS03070 e9353e1bd74e47d094c9029dc10d0a96 306 TIGRFAM TIGR00549 mevalon_kin: mevalonate kinase 10 277 3.0E-87 T 28-03-2018 IPR006205 Mevalonate kinase GO:0004496|GO:0005524|GO:0005737|GO:0008299 KEGG: 00900+2.7.1.36|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168 RK98_RS05880 1c4aa00f0fb16af14f50e62d6bec85ce 444 Gene3D G3DSA:3.60.15.10 1 262 1.4E-44 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS05880 1c4aa00f0fb16af14f50e62d6bec85ce 444 Gene3D G3DSA:3.40.250.10 343 442 4.9E-20 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS05880 1c4aa00f0fb16af14f50e62d6bec85ce 444 SUPERFAMILY SSF52821 237 340 9.56E-7 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS05880 1c4aa00f0fb16af14f50e62d6bec85ce 444 Pfam PF00753 Metallo-beta-lactamase superfamily 13 178 9.4E-10 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS05880 1c4aa00f0fb16af14f50e62d6bec85ce 444 SUPERFAMILY SSF52821 362 439 4.06E-23 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS05880 1c4aa00f0fb16af14f50e62d6bec85ce 444 Gene3D G3DSA:3.40.250.10 263 342 2.6E-6 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS05880 1c4aa00f0fb16af14f50e62d6bec85ce 444 Pfam PF00581 Rhodanese-like domain 359 439 4.9E-12 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS05880 1c4aa00f0fb16af14f50e62d6bec85ce 444 SMART SM00849 12 195 5.5E-30 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS05880 1c4aa00f0fb16af14f50e62d6bec85ce 444 SUPERFAMILY SSF56281 1 256 9.24E-53 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS05880 1c4aa00f0fb16af14f50e62d6bec85ce 444 SMART SM00450 350 441 7.7E-12 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS09690 f4d0c6301218b921e3946c56794858de 173 Pfam PF00430 ATP synthase B/B' CF(0) 20 150 2.1E-32 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RK98_RS09690 f4d0c6301218b921e3946c56794858de 173 Gene3D G3DSA:1.20.5.620 76 136 4.0E-6 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain RK98_RS09690 f4d0c6301218b921e3946c56794858de 173 SUPERFAMILY SSF81573 76 134 1.83E-6 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain RK98_RS09690 f4d0c6301218b921e3946c56794858de 173 Hamap MF_01398 ATP synthase subunit b [atpF]. 15 152 13.623 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RK98_RS09690 f4d0c6301218b921e3946c56794858de 173 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 24 169 8.9E-37 T 28-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF01476 LysM domain 357 399 9.5E-13 T 28-03-2018 IPR018392 LysM domain RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF02216 B domain 37 88 4.0E-29 T 28-03-2018 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF02216 B domain 155 207 4.8E-29 T 28-03-2018 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF02216 B domain 97 149 1.0E-29 T 28-03-2018 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF02216 B domain 213 265 5.6E-28 T 28-03-2018 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Gene3D G3DSA:1.20.5.420 212 269 2.5E-15 T 28-03-2018 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Gene3D G3DSA:1.20.5.420 155 211 2.5E-13 T 28-03-2018 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 SUPERFAMILY SSF46997 212 269 3.56E-27 T 28-03-2018 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Gene3D G3DSA:3.10.350.10 349 416 1.1E-14 T 28-03-2018 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Gene3D G3DSA:1.20.5.420 39 94 1.9E-11 T 28-03-2018 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Gene3D G3DSA:1.20.5.420 100 154 4.3E-13 T 28-03-2018 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 SMART SM00257 356 400 2.0E-13 T 28-03-2018 IPR018392 LysM domain RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 SUPERFAMILY SSF46997 99 153 4.36E-27 T 28-03-2018 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF03373 Octapeptide repeat 300 307 1.3 T 28-03-2018 IPR005038 Octapeptide repeat GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF03373 Octapeptide repeat 348 355 2.0 T 28-03-2018 IPR005038 Octapeptide repeat GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF03373 Octapeptide repeat 276 283 1.3 T 28-03-2018 IPR005038 Octapeptide repeat GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF03373 Octapeptide repeat 316 323 1.3 T 28-03-2018 IPR005038 Octapeptide repeat GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF03373 Octapeptide repeat 324 331 0.91 T 28-03-2018 IPR005038 Octapeptide repeat GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF03373 Octapeptide repeat 340 347 1.3 T 28-03-2018 IPR005038 Octapeptide repeat GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF03373 Octapeptide repeat 332 339 1.3 T 28-03-2018 IPR005038 Octapeptide repeat GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF03373 Octapeptide repeat 308 315 0.91 T 28-03-2018 IPR005038 Octapeptide repeat GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF03373 Octapeptide repeat 292 299 32.0 T 28-03-2018 IPR005038 Octapeptide repeat GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF03373 Octapeptide repeat 284 291 1.3 T 28-03-2018 IPR005038 Octapeptide repeat GO:0019865 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 SUPERFAMILY SSF54106 356 399 1.09E-8 T 28-03-2018 IPR018392 LysM domain RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 416 449 2.4E-4 T 28-03-2018 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 SUPERFAMILY SSF46997 38 92 5.23E-26 T 28-03-2018 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 SUPERFAMILY SSF46997 154 211 3.35E-27 T 28-03-2018 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 3 36 4.0E-9 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF04650 YSIRK type signal peptide 2 26 6.2E-10 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS05755 c6c09d081c678ea399e512e2f1cbc3b9 450 Pfam PF00746 LPXTG cell wall anchor motif 409 449 6.9E-10 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS04525 96628c9a2a79c108a8f4c098918f716e 181 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 7.4E-25 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS04525 96628c9a2a79c108a8f4c098918f716e 181 Gene3D G3DSA:3.40.630.30 3 181 6.3E-29 T 28-03-2018 RK98_RS04525 96628c9a2a79c108a8f4c098918f716e 181 SUPERFAMILY SSF55729 6 175 1.95E-46 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS09075 0f194ccd11e2f8ce1803d481f5cd4ce4 145 SUPERFAMILY SSF52161 5 143 4.06E-56 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RK98_RS09075 0f194ccd11e2f8ce1803d481f5cd4ce4 145 PIRSF PIRSF002181 1 143 6.9E-49 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RK98_RS09075 0f194ccd11e2f8ce1803d481f5cd4ce4 145 Gene3D G3DSA:3.90.1180.10 1 145 2.5E-59 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RK98_RS09075 0f194ccd11e2f8ce1803d481f5cd4ce4 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 9.1E-61 T 28-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09075 0f194ccd11e2f8ce1803d481f5cd4ce4 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 27.01 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RK98_RS09075 0f194ccd11e2f8ce1803d481f5cd4ce4 145 Pfam PF00572 Ribosomal protein L13 15 139 7.2E-54 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 RK98_RS09075 0f194ccd11e2f8ce1803d481f5cd4ce4 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 28-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 RK98_RS04865 5d360c6f911cdabad2560cfbf9d2ae67 388 Pfam PF12698 ABC-2 family transporter protein 17 381 2.7E-23 T 28-03-2018 RK98_RS04865 5d360c6f911cdabad2560cfbf9d2ae67 388 Gene3D G3DSA:3.40.1710.10 38 213 1.3E-12 T 28-03-2018 RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 Gene3D G3DSA:3.40.50.300 6 286 4.9E-56 T 28-03-2018 RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 Pfam PF12848 ABC transporter 227 301 2.5E-11 T 28-03-2018 IPR032781 ABC-transporter extension domain RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 SUPERFAMILY SSF52540 7 96 1.42E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 SUPERFAMILY SSF52540 129 254 1.42E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 Pfam PF00005 ABC transporter 22 188 2.4E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 Pfam PF00005 ABC transporter 342 471 8.5E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 SUPERFAMILY SSF52540 312 529 1.33E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 Pfam PF16326 ABC transporter C-terminal domain 557 622 2.9E-11 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 SMART SM00382 30 233 1.7E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 SMART SM00382 345 522 1.9E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02395 029effe717edd57f4e8005ccf0e7a7e1 627 Gene3D G3DSA:3.40.50.300 287 552 1.6E-51 T 28-03-2018 RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 Pfam PF13769 Virulence factor 110 189 3.3E-25 T 28-03-2018 IPR025989 Virulence factor domain RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 SMART SM00932 4 86 8.1E-18 T 28-03-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 SUPERFAMILY SSF110836 1 84 7.06E-24 T 28-03-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 5 84 1.4E-17 T 28-03-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 Gene3D G3DSA:3.30.1370.70 2 87 4.9E-17 T 28-03-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 SMART SM00567 E-Z type HEAT repeats 249 278 8.5 T 28-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 SMART SM00567 E-Z type HEAT repeats 311 340 250.0 T 28-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 SMART SM00567 E-Z type HEAT repeats 280 309 0.74 T 28-03-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 Pfam PF13646 HEAT repeats 238 318 6.6E-13 T 28-03-2018 RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 Gene3D G3DSA:1.25.40.70 292 358 7.8E-7 T 28-03-2018 RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 Gene3D G3DSA:1.25.40.70 187 291 5.5E-12 T 28-03-2018 RK98_RS13640 2e8124e2b0722331a8cf16bfa4eacdb0 374 SUPERFAMILY SSF48371 233 371 6.53E-28 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 RK98_RS03665 9243d6e5968ec062505114f7b23d2106 178 Pfam PF01751 Toprim domain 6 77 2.8E-5 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS03665 9243d6e5968ec062505114f7b23d2106 178 Hamap MF_01469 Ribonuclease M5 [rnmV]. 2 177 29.783 T 28-03-2018 IPR004466 Ribonuclease M5 GO:0043822 RK98_RS03665 9243d6e5968ec062505114f7b23d2106 178 Pfam PF13331 Domain of unknown function (DUF4093) 91 175 1.7E-24 T 28-03-2018 IPR025156 Ribonuclease M5, C-terminal domain RK98_RS03665 9243d6e5968ec062505114f7b23d2106 178 Gene3D G3DSA:3.40.1360.20 1 124 4.5E-18 T 28-03-2018 RK98_RS03665 9243d6e5968ec062505114f7b23d2106 178 SMART SM00493 4 77 1.4E-6 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS03665 9243d6e5968ec062505114f7b23d2106 178 SUPERFAMILY SSF110455 1 114 1.75E-35 T 28-03-2018 RK98_RS03665 9243d6e5968ec062505114f7b23d2106 178 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 175 1.2E-53 T 28-03-2018 IPR004466 Ribonuclease M5 GO:0043822 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 Pfam PF00679 Elongation factor G C-terminus 399 477 6.9E-22 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 Gene3D G3DSA:3.40.50.300 1 70 1.5E-10 T 28-03-2018 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 Gene3D G3DSA:3.30.70.240 404 495 1.4E-17 T 28-03-2018 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 SUPERFAMILY SSF50447 155 302 7.49E-31 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 Pfam PF03144 Elongation factor Tu domain 2 222 292 1.5E-10 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 PRINTS PR00315 GTP-binding elongation factor signature 54 62 1.3E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.3E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.3E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.3E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.3E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 8 602 1.1E-284 T 28-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 SUPERFAMILY SSF54980 305 390 1.4E-15 T 28-03-2018 IPR035647 EF-G domain III/V-like RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 Pfam PF14492 Elongation Factor G, domain II 332 380 9.2E-7 T 28-03-2018 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 SMART SM00838 398 483 2.7E-5 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 SUPERFAMILY SSF54980 401 516 3.27E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 SUPERFAMILY SSF52540 4 210 1.25E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 Gene3D G3DSA:2.40.50.250 496 576 4.8E-36 T 28-03-2018 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 Gene3D G3DSA:3.30.70.870 306 403 6.5E-33 T 28-03-2018 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 Gene3D G3DSA:2.40.30.10 205 305 2.1E-19 T 28-03-2018 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 Pfam PF00009 Elongation factor Tu GTP binding domain 7 198 5.3E-57 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 142 2.6E-24 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS11870 706298fdbcf43936ecd499f3fb84a67d 615 Gene3D G3DSA:3.40.50.300 71 203 2.0E-31 T 28-03-2018 RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 Gene3D G3DSA:1.10.10.10 258 327 4.7E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 SUPERFAMILY SSF46785 258 327 1.18E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 Gene3D G3DSA:3.40.50.300 19 182 4.1E-30 T 28-03-2018 RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 163.597 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 SUPERFAMILY SSF52540 21 253 2.42E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 4 236 4.8E-114 T 28-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 326 1.9E-33 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 Gene3D G3DSA:1.10.8.60 185 255 9.0E-28 T 28-03-2018 RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 25 327 6.1E-141 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 SMART SM00382 52 183 3.1E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS14750 5f399cc19e48ef3ef03d3bd08e1dc981 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 332 4.0E-43 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 RK98_RS05615 c963ef479085d4f69da08aefe3792d7b 235 Gene3D G3DSA:3.40.50.1580 11 235 3.4E-50 T 28-03-2018 RK98_RS05615 c963ef479085d4f69da08aefe3792d7b 235 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 3 235 39.711 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 RK98_RS05615 c963ef479085d4f69da08aefe3792d7b 235 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 13 234 2.1E-89 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 RK98_RS05615 c963ef479085d4f69da08aefe3792d7b 235 Pfam PF01048 Phosphorylase superfamily 19 221 1.2E-39 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RK98_RS05615 c963ef479085d4f69da08aefe3792d7b 235 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS05615 c963ef479085d4f69da08aefe3792d7b 235 SUPERFAMILY SSF53167 5 234 7.07E-86 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RK98_RS12300 f47e81676301164e39fe967a34ea2611 321 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 1 320 24.027 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RK98_RS12300 f47e81676301164e39fe967a34ea2611 321 ProSitePatterns PS01347 MraY family signature 1. 44 56 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RK98_RS12300 f47e81676301164e39fe967a34ea2611 321 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 14 316 7.1E-102 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RK98_RS12300 f47e81676301164e39fe967a34ea2611 321 Pfam PF00953 Glycosyl transferase family 4 77 246 4.5E-40 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 RK98_RS12300 f47e81676301164e39fe967a34ea2611 321 ProSitePatterns PS01348 MraY family signature 2. 166 177 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RK98_RS02920 5c667045e909f6e6fd24a3d528d29a16 309 Pfam PF04657 Putative inner membrane exporter, YdcZ 3 144 4.2E-35 T 28-03-2018 IPR006750 Putative inner membrane exporter, YdcZ RK98_RS02920 5c667045e909f6e6fd24a3d528d29a16 309 Pfam PF04657 Putative inner membrane exporter, YdcZ 163 305 3.6E-38 T 28-03-2018 IPR006750 Putative inner membrane exporter, YdcZ RK98_RS15010 348ca4952baf4bc78537a1ee7883406f 207 Pfam PF01121 Dephospho-CoA kinase 4 179 2.7E-58 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 RK98_RS15010 348ca4952baf4bc78537a1ee7883406f 207 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 198 27.533 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 RK98_RS15010 348ca4952baf4bc78537a1ee7883406f 207 Gene3D G3DSA:3.40.50.300 1 200 2.5E-44 T 28-03-2018 RK98_RS15010 348ca4952baf4bc78537a1ee7883406f 207 SUPERFAMILY SSF52540 1 193 1.24E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS15010 348ca4952baf4bc78537a1ee7883406f 207 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 2.3E-58 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 RK98_RS00400 5d35fc31113e619c9e777f3999d80b9e 154 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 12 149 2.4E-60 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00400 5d35fc31113e619c9e777f3999d80b9e 154 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 7 152 31.524 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00400 5d35fc31113e619c9e777f3999d80b9e 154 Gene3D G3DSA:3.40.50.960 1 67 8.6E-24 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00400 5d35fc31113e619c9e777f3999d80b9e 154 Gene3D G3DSA:3.40.50.960 68 154 1.6E-41 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00400 5d35fc31113e619c9e777f3999d80b9e 154 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 12 148 2.3E-59 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00400 5d35fc31113e619c9e777f3999d80b9e 154 SUPERFAMILY SSF52121 3 152 2.35E-65 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 ProSitePatterns PS00672 Serine proteases, V8 family, histidine active site. 60 74 - T 28-03-2018 IPR028301 Serine proteases, V8 family, histidine active site RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 PRINTS PR00839 V8 serine protease family signature 39 56 1.2E-26 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 PRINTS PR00839 V8 serine protease family signature 59 76 1.2E-26 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 PRINTS PR00839 V8 serine protease family signature 178 194 1.2E-26 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 PRINTS PR00839 V8 serine protease family signature 195 207 1.2E-26 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 PRINTS PR00839 V8 serine protease family signature 144 157 1.2E-26 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 Pfam PF00089 Trypsin 46 220 8.4E-20 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 PRINTS PR01774 Exfoliative toxin signature 180 204 2.1E-8 T 28-03-2018 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 PRINTS PR01774 Exfoliative toxin signature 66 90 2.1E-8 T 28-03-2018 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 SUPERFAMILY SSF50494 17 233 2.62E-34 T 28-03-2018 IPR009003 Peptidase S1, PA clan RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 Gene3D G3DSA:2.40.10.10 132 234 3.2E-18 T 28-03-2018 RK98_RS00625 524c7c35d3e5c03d6efb5443e2ceb67b 235 Gene3D G3DSA:2.40.10.10 46 131 3.1E-9 T 28-03-2018 RK98_RS02080 1852df355ab0d3d627ecc5421517d97b 337 SUPERFAMILY SSF100950 97 337 1.09E-63 T 28-03-2018 RK98_RS02080 1852df355ab0d3d627ecc5421517d97b 337 Gene3D G3DSA:1.10.10.10 19 87 1.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02080 1852df355ab0d3d627ecc5421517d97b 337 SUPERFAMILY SSF46785 19 84 9.3E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02080 1852df355ab0d3d627ecc5421517d97b 337 Pfam PF04198 Putative sugar-binding domain 92 337 7.6E-74 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 RK98_RS02080 1852df355ab0d3d627ecc5421517d97b 337 Gene3D G3DSA:3.40.50.1360 95 337 4.5E-33 T 28-03-2018 RK98_RS07950 0d6e05bda0d916ee80e14bcf891e431c 230 Pfam PF03744 6-carboxyhexanoate--CoA ligase 2 222 1.2E-70 T 28-03-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 RK98_RS07950 0d6e05bda0d916ee80e14bcf891e431c 230 ProDom PD017229 LIGASE SYNTHASE BIOTIN MAGNESIUM PIMELOYL-COA 6-CARBOXYHEXANOATE--COA BIOSYNTHESIS 6-CARBOXYHEXANOATE-COA BIOW COA 2 199 5.0E-115 T 28-03-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 RK98_RS07950 0d6e05bda0d916ee80e14bcf891e431c 230 Hamap MF_00668 6-carboxyhexanoate--CoA ligase [bioW]. 1 226 49.876 T 28-03-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 RK98_RS04505 abc514ff53f220c04ba7b66235939fb8 220 Pfam PF00902 Sec-independent protein translocase protein (TatC) 5 197 4.4E-40 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RK98_RS04505 abc514ff53f220c04ba7b66235939fb8 220 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 216 13.928 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RK98_RS04505 abc514ff53f220c04ba7b66235939fb8 220 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 104 4.8E-23 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RK98_RS04505 abc514ff53f220c04ba7b66235939fb8 220 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 130 158 4.8E-23 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RK98_RS04505 abc514ff53f220c04ba7b66235939fb8 220 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 60 78 4.8E-23 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RK98_RS04505 abc514ff53f220c04ba7b66235939fb8 220 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 2 202 1.7E-43 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 RK98_RS13305 e242dd64937e6c5e366c7c4189e38202 343 SUPERFAMILY SSF53187 3 82 1.31E-54 T 28-03-2018 RK98_RS13305 e242dd64937e6c5e366c7c4189e38202 343 SUPERFAMILY SSF53187 177 339 1.31E-54 T 28-03-2018 RK98_RS13305 e242dd64937e6c5e366c7c4189e38202 343 Pfam PF05343 M42 glutamyl aminopeptidase 45 333 1.2E-88 T 28-03-2018 IPR008007 Peptidase M42 RK98_RS13305 e242dd64937e6c5e366c7c4189e38202 343 Gene3D G3DSA:3.40.630.10 1 340 2.0E-43 T 28-03-2018 RK98_RS13305 e242dd64937e6c5e366c7c4189e38202 343 PIRSF PIRSF001123 1 340 2.0E-40 T 28-03-2018 IPR008007 Peptidase M42 RK98_RS13305 e242dd64937e6c5e366c7c4189e38202 343 SUPERFAMILY SSF101821 70 182 2.44E-31 T 28-03-2018 RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 325 5.3E-25 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 Gene3D G3DSA:3.40.50.970 1 188 2.8E-47 T 28-03-2018 RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 425 444 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 Gene3D G3DSA:3.40.50.1220 189 339 1.5E-24 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 388 534 1.1E-43 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 Gene3D G3DSA:3.40.50.970 340 552 8.2E-41 T 28-03-2018 RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 8 545 3.3E-281 T 28-03-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 SUPERFAMILY SSF52518 5 173 2.98E-48 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 SUPERFAMILY SSF52467 185 356 9.0E-33 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 7 173 8.6E-50 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RK98_RS09130 5736b51fd7cc697b09a5f4cfccb866ff 554 SUPERFAMILY SSF52518 363 544 1.45E-59 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS01890 e04ac9b4edf9da4e0a65d232f3e24c6c 351 Gene3D G3DSA:2.70.240.10 60 336 1.4E-77 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS01890 e04ac9b4edf9da4e0a65d232f3e24c6c 351 PRINTS PR01468 Staphylococcal bi-component toxin signature 93 112 3.3E-17 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS01890 e04ac9b4edf9da4e0a65d232f3e24c6c 351 PRINTS PR01468 Staphylococcal bi-component toxin signature 268 285 3.3E-17 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS01890 e04ac9b4edf9da4e0a65d232f3e24c6c 351 PRINTS PR01468 Staphylococcal bi-component toxin signature 155 176 3.3E-17 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS01890 e04ac9b4edf9da4e0a65d232f3e24c6c 351 Pfam PF07968 Leukocidin/Hemolysin toxin family 89 332 3.2E-74 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS01890 e04ac9b4edf9da4e0a65d232f3e24c6c 351 SUPERFAMILY SSF56959 60 348 2.94E-93 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 118 236 2.8E-34 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 Gene3D G3DSA:3.10.20.120 103 230 8.5E-41 T 28-03-2018 RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 SUPERFAMILY SSF50203 14 111 9.87E-28 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 Gene3D G3DSA:2.40.50.110 46 102 3.4E-19 T 28-03-2018 RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 PRINTS PR01898 Bacterial superantigen superfamily signature 71 97 2.7E-29 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 PRINTS PR01898 Bacterial superantigen superfamily signature 99 112 2.7E-29 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 PRINTS PR01898 Bacterial superantigen superfamily signature 154 168 2.7E-29 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 PRINTS PR01898 Bacterial superantigen superfamily signature 141 154 2.7E-29 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 PRINTS PR01898 Bacterial superantigen superfamily signature 219 235 2.7E-29 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 Pfam PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain 47 107 4.3E-5 T 28-03-2018 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold GO:0009405 RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 SUPERFAMILY SSF54334 113 237 2.62E-44 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS00710 f88f02c67d0a1cfd505604d45ba9bcfe 242 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 141 164 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS11810 c2ba32414e58e9290f173c673da8812c 91 SUPERFAMILY SSF158504 4 84 4.84E-33 T 28-03-2018 IPR023324 BH2638-like domain RK98_RS11810 c2ba32414e58e9290f173c673da8812c 91 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 1 83 2.0E-43 T 28-03-2018 IPR007920 Protein of unknown function UPF0223 RK98_RS11810 c2ba32414e58e9290f173c673da8812c 91 Hamap MF_01041 UPF0223 protein . 1 89 26.445 T 28-03-2018 IPR007920 Protein of unknown function UPF0223 RK98_RS11810 c2ba32414e58e9290f173c673da8812c 91 Pfam PF05256 Uncharacterised protein family (UPF0223) 2 85 3.9E-36 T 28-03-2018 IPR007920 Protein of unknown function UPF0223 RK98_RS11810 c2ba32414e58e9290f173c673da8812c 91 Gene3D G3DSA:1.10.220.80 12 88 2.8E-30 T 28-03-2018 IPR023324 BH2638-like domain RK98_RS11810 c2ba32414e58e9290f173c673da8812c 91 PIRSF PIRSF037260 1 91 4.1E-40 T 28-03-2018 IPR007920 Protein of unknown function UPF0223 RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 SUPERFAMILY SSF47781 459 545 4.0E-25 T 28-03-2018 IPR010994 RuvA domain 2-like RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 Gene3D G3DSA:1.10.10.650 2 109 1.0E-30 T 28-03-2018 IPR023319 Tex-like protein, HTH domain RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 SMART SM00732 315 413 1.3E-35 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 Gene3D G3DSA:1.10.150.310 488 622 8.2E-44 T 28-03-2018 RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 SMART SM00316 641 712 7.6E-21 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 Pfam PF00575 S1 RNA binding domain 640 711 2.3E-14 T 28-03-2018 IPR003029 S1 domain GO:0003676 RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 Gene3D G3DSA:2.40.50.140 632 714 3.8E-22 T 28-03-2018 RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 SUPERFAMILY SSF50249 629 711 9.7E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 SUPERFAMILY SSF53098 311 458 4.02E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 SUPERFAMILY SSF47781 550 624 2.89E-17 T 28-03-2018 IPR010994 RuvA domain 2-like RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 Pfam PF09371 Tex-like protein N-terminal domain 10 191 5.5E-64 T 28-03-2018 IPR018974 Tex-like protein, N-terminal RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 SUPERFAMILY SSF158832 3 310 2.22E-108 T 28-03-2018 RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 Pfam PF16921 Tex protein YqgF-like domain 315 440 1.4E-53 T 28-03-2018 IPR032639 Tex protein, YqgF-like domain RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 Gene3D G3DSA:3.30.420.140 317 459 1.2E-55 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 Gene3D G3DSA:1.10.3500.10 110 316 3.1E-61 T 28-03-2018 IPR023323 Tex-like domain RK98_RS09940 4de0b2857fb7970624a80396a1596e31 716 Pfam PF12836 Helix-hairpin-helix motif 480 544 3.8E-25 T 28-03-2018 RK98_RS00055 4697359aedc62a0958cd04d51d0c5564 137 PRINTS PR01438 Universal stress protein signature 2 20 3.5E-12 T 28-03-2018 IPR006015 Universal stress protein A RK98_RS00055 4697359aedc62a0958cd04d51d0c5564 137 PRINTS PR01438 Universal stress protein signature 115 137 3.5E-12 T 28-03-2018 IPR006015 Universal stress protein A RK98_RS00055 4697359aedc62a0958cd04d51d0c5564 137 PRINTS PR01438 Universal stress protein signature 97 109 3.5E-12 T 28-03-2018 IPR006015 Universal stress protein A RK98_RS00055 4697359aedc62a0958cd04d51d0c5564 137 SUPERFAMILY SSF52402 1 137 4.35E-22 T 28-03-2018 RK98_RS00055 4697359aedc62a0958cd04d51d0c5564 137 Pfam PF00582 Universal stress protein family 1 137 7.0E-23 T 28-03-2018 IPR006016 UspA GO:0006950 RK98_RS00055 4697359aedc62a0958cd04d51d0c5564 137 Gene3D G3DSA:3.40.50.620 2 137 1.5E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS03310 520ee1a23b1f9f880c5cb7f07c60f3dc 84 SUPERFAMILY SSF55315 11 83 1.18E-16 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like RK98_RS03310 520ee1a23b1f9f880c5cb7f07c60f3dc 84 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 11 81 5.8E-10 T 28-03-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 RK98_RS03310 520ee1a23b1f9f880c5cb7f07c60f3dc 84 Gene3D G3DSA:3.30.1330.30 3 84 6.8E-14 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like RK98_RS03310 520ee1a23b1f9f880c5cb7f07c60f3dc 84 Hamap MF_00574 Putative ribosomal protein L7Ae-like. 2 84 22.453 T 28-03-2018 IPR023460 Ribosomal protein L7Ae, putative RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 Gene3D G3DSA:3.40.50.1980 18 213 1.0E-77 T 28-03-2018 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 Pfam PF00815 Histidinol dehydrogenase 21 414 1.2E-141 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 PIRSF PIRSF000099 3 416 3.8E-151 T 28-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 415 36.515 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 PRINTS PR00083 Histidinol dehydrogenase signature 158 184 4.1E-69 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 PRINTS PR00083 Histidinol dehydrogenase signature 25 49 4.1E-69 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 PRINTS PR00083 Histidinol dehydrogenase signature 217 238 4.1E-69 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 PRINTS PR00083 Histidinol dehydrogenase signature 239 258 4.1E-69 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 PRINTS PR00083 Histidinol dehydrogenase signature 124 150 4.1E-69 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 PRINTS PR00083 Histidinol dehydrogenase signature 308 333 4.1E-69 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 PRINTS PR00083 Histidinol dehydrogenase signature 349 367 4.1E-69 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 PRINTS PR00083 Histidinol dehydrogenase signature 188 213 4.1E-69 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 26 414 5.1E-144 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 Gene3D G3DSA:3.40.50.1980 214 359 2.5E-52 T 28-03-2018 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 SUPERFAMILY SSF53720 22 413 1.45E-70 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RK98_RS06505 7b7d4209913fc4acd4e6752c1de28e73 416 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 217 249 - T 28-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 RK98_RS04815 4bb545d5f8145fb07be0a267156dc68c 104 Pfam PF06013 Proteins of 100 residues with WXG 7 92 3.8E-12 T 28-03-2018 IPR010310 Type VII secretion system ESAT-6-like RK98_RS04815 4bb545d5f8145fb07be0a267156dc68c 104 SUPERFAMILY SSF140453 7 92 1.44E-5 T 28-03-2018 IPR010310 Type VII secretion system ESAT-6-like RK98_RS04815 4bb545d5f8145fb07be0a267156dc68c 104 Gene3D G3DSA:1.10.287.1060 5 96 4.8E-4 T 28-03-2018 RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 Gene3D G3DSA:3.90.226.10 446 751 1.4E-29 T 28-03-2018 RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 187 7.5E-51 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 SUPERFAMILY SSF51735 1 188 2.99E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 Gene3D G3DSA:1.10.1040.10 188 292 1.6E-17 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 Gene3D G3DSA:1.10.1040.10 346 445 5.9E-9 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 537 557 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 SUPERFAMILY SSF48179 188 298 2.21E-21 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 286 7.9E-21 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 Gene3D G3DSA:3.40.50.720 1 187 5.5E-39 T 28-03-2018 RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 SUPERFAMILY SSF52096 441 750 7.88E-34 T 28-03-2018 IPR029045 ClpP/crotonase-like domain RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 Pfam PF00378 Enoyl-CoA hydratase/isomerase 454 586 7.0E-16 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RK98_RS05135 c36cb256969662529cd3367893bc1c5c 753 SUPERFAMILY SSF48179 337 418 7.48E-11 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS10905 0e2c62828bc74dd79c8f394eeb7755e3 305 SUPERFAMILY SSF102114 21 289 7.46E-63 T 28-03-2018 RK98_RS10905 0e2c62828bc74dd79c8f394eeb7755e3 305 PIRSF PIRSF005963 1 305 8.6E-136 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RK98_RS10905 0e2c62828bc74dd79c8f394eeb7755e3 305 TIGRFAM TIGR00510 lipA: lipoyl synthase 2 294 1.1E-120 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RK98_RS10905 0e2c62828bc74dd79c8f394eeb7755e3 305 SMART SM00729 58 266 3.1E-15 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RK98_RS10905 0e2c62828bc74dd79c8f394eeb7755e3 305 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 4 46 2.5E-10 T 28-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RK98_RS10905 0e2c62828bc74dd79c8f394eeb7755e3 305 Pfam PF04055 Radical SAM superfamily 65 225 2.3E-13 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS10905 0e2c62828bc74dd79c8f394eeb7755e3 305 Hamap MF_00206 Lipoyl synthase [lipA]. 1 297 148.084 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 RK98_RS10905 0e2c62828bc74dd79c8f394eeb7755e3 305 Gene3D G3DSA:3.20.20.70 3 288 2.9E-25 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 SUPERFAMILY SSF52540 54 337 6.86E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 SMART SM00487 11 205 2.0E-32 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 Gene3D G3DSA:3.40.50.300 1 194 2.9E-33 T 28-03-2018 RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 129 138 - T 28-03-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 Pfam PF00271 Helicase conserved C-terminal domain 212 318 2.4E-20 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 Gene3D G3DSA:1.10.10.10 344 445 1.2E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 SMART SM00490 234 319 3.9E-24 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 Pfam PF00270 DEAD/DEAH box helicase 17 175 2.8E-19 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 4 343 9.3E-97 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 Pfam PF16124 RecQ zinc-binding 389 428 2.0E-7 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain RK98_RS13930 e1a280f7d137b70b0e5f493471a355b3 459 Gene3D G3DSA:3.40.50.300 200 343 2.3E-33 T 28-03-2018 RK98_RS06395 eb63b6c9e9a5579c3a32d88598872fbc 252 Gene3D G3DSA:3.40.50.300 1 238 1.0E-65 T 28-03-2018 RK98_RS06395 eb63b6c9e9a5579c3a32d88598872fbc 252 SMART SM00382 31 219 3.7E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS06395 eb63b6c9e9a5579c3a32d88598872fbc 252 Pfam PF00005 ABC transporter 22 170 5.5E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS06395 eb63b6c9e9a5579c3a32d88598872fbc 252 SUPERFAMILY SSF52540 3 223 5.86E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04515 d8aa37ad0fad63d23b8b9de701b2cc1c 409 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 7 409 2.2E-180 T 28-03-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 RK98_RS04515 d8aa37ad0fad63d23b8b9de701b2cc1c 409 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 64 398 4.0E-99 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 RK98_RS04515 d8aa37ad0fad63d23b8b9de701b2cc1c 409 Pfam PF04261 Dyp-type peroxidase family 64 398 7.0E-117 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 RK98_RS04515 d8aa37ad0fad63d23b8b9de701b2cc1c 409 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 44 5.6E-6 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal RK98_RS04515 d8aa37ad0fad63d23b8b9de701b2cc1c 409 SUPERFAMILY SSF54909 59 403 7.33E-79 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 Pfam PF13414 TPR repeat 144 184 3.1E-7 T 28-03-2018 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 Gene3D G3DSA:1.25.40.10 84 135 2.8E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 Gene3D G3DSA:1.25.40.10 136 190 1.8E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 SUPERFAMILY SSF48452 10 212 2.66E-34 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 SMART SM00028 102 135 27.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 SMART SM00028 34 67 0.013 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 SMART SM00028 137 170 2.9 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 SMART SM00028 68 101 3.9E-5 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 SMART SM00028 171 205 0.0022 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 Gene3D G3DSA:1.25.40.10 191 215 0.0032 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 Pfam PF14559 Tetratricopeptide repeat 45 96 7.0E-9 T 28-03-2018 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 Pfam PF13181 Tetratricopeptide repeat 103 134 0.014 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS14630 8568f23777fee6136fa551c745bcd420 222 Gene3D G3DSA:1.25.40.10 4 83 4.5E-20 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS04770 7bd09098188886da767ca9bf751ce19a 166 SUPERFAMILY SSF160424 3 165 1.44E-60 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04770 7bd09098188886da767ca9bf751ce19a 166 Pfam PF04634 Protein of unknown function, DUF600 7 152 5.2E-51 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04770 7bd09098188886da767ca9bf751ce19a 166 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 157 2.1E-77 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04770 7bd09098188886da767ca9bf751ce19a 166 Gene3D G3DSA:3.30.500.20 4 116 3.8E-37 T 28-03-2018 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.177 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 Gene3D G3DSA:3.40.50.300 38 138 6.9E-4 T 28-03-2018 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 Pfam PF00005 ABC transporter 622 858 4.8E-7 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 Gene3D G3DSA:3.40.50.300 412 599 5.6E-20 T 28-03-2018 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 923 0.0 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 Gene3D G3DSA:3.40.50.300 8 37 0.0015 T 28-03-2018 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 Gene3D G3DSA:3.40.50.300 607 948 5.2E-56 T 28-03-2018 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 Gene3D G3DSA:3.30.190.20 139 247 2.2E-43 T 28-03-2018 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 Gene3D G3DSA:1.10.8.280 284 405 1.0E-39 T 28-03-2018 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 SUPERFAMILY SSF52540 612 912 4.21E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 SUPERFAMILY SSF52540 12 206 4.19E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02160 9e64e70c5aa38ee6b3327836bbff0ded 948 SUPERFAMILY SSF52540 430 569 4.19E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 Pfam PF02881 SRP54-type protein, helical bundle domain 100 164 2.0E-12 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 SMART SM00382 185 365 1.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 Gene3D G3DSA:1.20.120.140 4 158 1.7E-21 T 28-03-2018 RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 SUPERFAMILY SSF47364 86 163 1.83E-19 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 Gene3D G3DSA:3.40.50.300 159 298 4.2E-21 T 28-03-2018 RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 SMART SM00962 186 387 2.8E-124 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 Pfam PF00448 SRP54-type protein, GTPase domain 187 386 1.4E-81 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 SUPERFAMILY SSF52540 186 385 1.81E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 360 373 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 ProSitePatterns PS00018 EF-hand calcium-binding domain. 64 76 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 112 386 4.0E-117 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 SMART SM00963 88 169 4.2E-23 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 112 387 63.11 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 RK98_RS12575 51a14d2f1e4f5f8b64567b438d7efb71 416 Gene3D G3DSA:1.20.120.140 299 404 1.3E-24 T 28-03-2018 RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 Pfam PF03413 Peptidase propeptide and YPEB domain 119 191 2.0E-13 T 28-03-2018 IPR025711 PepSY domain RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 201 349 9.8E-42 T 28-03-2018 IPR013856 Peptidase M4 domain GO:0004222 RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 304 324 7.4E-25 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 361 372 7.4E-25 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 340 356 7.4E-25 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 424 440 7.4E-25 T 28-03-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 Gene3D G3DSA:3.10.450.40 119 194 5.8E-8 T 28-03-2018 RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 57 105 3.4E-12 T 28-03-2018 IPR011096 FTP domain RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 SUPERFAMILY SSF55486 198 497 3.37E-111 T 28-03-2018 RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 Gene3D G3DSA:1.10.390.10 354 498 3.0E-51 T 28-03-2018 RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 352 497 1.2E-51 T 28-03-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 RK98_RS06715 0af1f23e0f8e92bc6b7a02e8fdcbb7b2 498 Gene3D G3DSA:3.10.170.10 200 353 1.0E-40 T 28-03-2018 RK98_RS04490 99740c10f8871f78228dd9528f591417 67 Gene3D G3DSA:1.10.3100.10 1 67 1.5E-17 T 28-03-2018 IPR027910 YdiL-like domain RK98_RS04490 99740c10f8871f78228dd9528f591417 67 SMART SM00530 4 59 6.4E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS04490 99740c10f8871f78228dd9528f591417 67 Pfam PF01381 Helix-turn-helix 5 57 1.5E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS04490 99740c10f8871f78228dd9528f591417 67 SUPERFAMILY SSF47413 2 65 2.95E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS01215 253e5dc75a6a22db03cdc052d58745e5 347 SUPERFAMILY SSF55874 221 338 6.29E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS01215 253e5dc75a6a22db03cdc052d58745e5 347 Pfam PF07730 Histidine kinase 147 210 4.3E-16 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RK98_RS01215 253e5dc75a6a22db03cdc052d58745e5 347 Gene3D G3DSA:3.30.565.10 210 347 4.7E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS01215 253e5dc75a6a22db03cdc052d58745e5 347 PIRSF PIRSF037431 2 347 7.8E-121 T 28-03-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 RK98_RS01215 253e5dc75a6a22db03cdc052d58745e5 347 SMART SM00387 248 341 7.5E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS01215 253e5dc75a6a22db03cdc052d58745e5 347 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 340 6.3E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS12115 8e312610dacbfff491026b76d0453c31 167 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 5 148 4.2E-19 T 28-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 RK98_RS12115 8e312610dacbfff491026b76d0453c31 167 SUPERFAMILY SSF56300 1 151 1.14E-35 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS12115 8e312610dacbfff491026b76d0453c31 167 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 4 144 5.8E-18 T 28-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 RK98_RS12115 8e312610dacbfff491026b76d0453c31 167 Gene3D G3DSA:3.60.21.10 1 163 1.1E-16 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 Pfam PF00694 Aconitase C-terminal domain 700 827 7.3E-43 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 ProSitePatterns PS00450 Aconitase family signature 1. 435 451 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 Gene3D G3DSA:3.30.499.10 21 239 7.5E-69 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 Gene3D G3DSA:3.30.499.10 373 584 3.1E-64 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 899 0.0 T 28-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 SUPERFAMILY SSF52016 639 898 1.96E-84 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 Gene3D G3DSA:3.20.19.10 663 900 6.0E-89 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 Pfam PF00330 Aconitase family (aconitate hydratase) 76 570 1.5E-176 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 ProSitePatterns PS01244 Aconitase family signature 2. 501 514 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 PRINTS PR00415 Aconitase family signature 439 450 5.1E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 PRINTS PR00415 Aconitase family signature 501 514 5.1E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 PRINTS PR00415 Aconitase family signature 217 232 5.1E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 PRINTS PR00415 Aconitase family signature 279 292 5.1E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 PRINTS PR00415 Aconitase family signature 170 178 5.1E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 PRINTS PR00415 Aconitase family signature 146 159 5.1E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 PRINTS PR00415 Aconitase family signature 293 306 5.1E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 PRINTS PR00415 Aconitase family signature 203 216 5.1E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 PRINTS PR00415 Aconitase family signature 373 387 5.1E-40 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 SUPERFAMILY SSF53732 11 635 2.09E-220 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS13210 fe5ae9190b95aae1807d5650836c8def 901 Gene3D G3DSA:3.40.1060.10 240 372 1.8E-44 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09270 c8f4e47cba738be57423f220c43d2e7d 397 SUPERFAMILY SSF103473 5 386 4.71E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS09270 c8f4e47cba738be57423f220c43d2e7d 397 Gene3D G3DSA:1.20.1250.20 3 192 1.4E-15 T 28-03-2018 RK98_RS09270 c8f4e47cba738be57423f220c43d2e7d 397 Gene3D G3DSA:1.20.1250.20 210 395 4.1E-15 T 28-03-2018 RK98_RS09270 c8f4e47cba738be57423f220c43d2e7d 397 Pfam PF05977 Transmembrane secretion effector 10 381 4.4E-41 T 28-03-2018 IPR010290 Transmembrane secretion effector RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 876 179.161 T 28-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 SUPERFAMILY SSF50447 455 553 3.53E-15 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 Pfam PF01411 tRNA synthetases class II (A) 8 555 2.3E-209 T 28-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 2.3E-31 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 2.3E-31 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 2.3E-31 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 2.3E-31 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 2.3E-31 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 856 0.0 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 Pfam PF02272 DHHA1 domain 735 873 2.4E-30 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 SUPERFAMILY SSF55186 553 708 1.83E-51 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 697 1.5E-17 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 Gene3D G3DSA:3.30.980.10 555 714 6.6E-44 T 28-03-2018 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 SMART SM00863 654 697 7.2E-21 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 Gene3D G3DSA:3.30.930.10 3 242 2.5E-96 T 28-03-2018 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 SUPERFAMILY SSF55681 5 245 6.46E-89 T 28-03-2018 RK98_RS14620 80f5eaa064946c0a1e2ba3b6eeb47dd7 876 SUPERFAMILY SSF101353 246 445 7.19E-68 T 28-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 RK98_RS00365 5b77eb7cbed01f4141eb281a18651350 393 Gene3D G3DSA:1.20.1250.20 4 179 2.6E-23 T 28-03-2018 RK98_RS00365 5b77eb7cbed01f4141eb281a18651350 393 SUPERFAMILY SSF103473 5 385 1.57E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS00365 5b77eb7cbed01f4141eb281a18651350 393 Pfam PF07690 Major Facilitator Superfamily 10 223 2.6E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS00365 5b77eb7cbed01f4141eb281a18651350 393 Gene3D G3DSA:1.20.1250.20 195 393 7.4E-28 T 28-03-2018 RK98_RS01325 c2905f5a9ecdcb9219901ab76662b83a 512 Pfam PF00474 Sodium:solute symporter family 47 447 3.6E-98 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RK98_RS01325 c2905f5a9ecdcb9219901ab76662b83a 512 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 47 447 4.9E-89 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RK98_RS01325 c2905f5a9ecdcb9219901ab76662b83a 512 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 16 509 5.7E-232 T 28-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 RK98_RS07985 787bf11702d0d57f4076374f3b7cdaaf 426 SUPERFAMILY SSF46997 103 151 3.14E-17 T 28-03-2018 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 RK98_RS07985 787bf11702d0d57f4076374f3b7cdaaf 426 Gene3D G3DSA:1.20.5.420 99 168 7.1E-5 T 28-03-2018 RK98_RS07985 787bf11702d0d57f4076374f3b7cdaaf 426 Gene3D G3DSA:1.20.5.420 43 98 0.017 T 28-03-2018 RK98_RS07985 787bf11702d0d57f4076374f3b7cdaaf 426 Pfam PF02216 B domain 96 148 1.6E-26 T 28-03-2018 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 RK98_RS07985 787bf11702d0d57f4076374f3b7cdaaf 426 Pfam PF02216 B domain 44 94 1.0E-26 T 28-03-2018 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 RK98_RS07985 787bf11702d0d57f4076374f3b7cdaaf 426 Pfam PF11621 C3 binding domain 4 of IgG-bind protein SBI 198 266 2.8E-46 T 28-03-2018 IPR021657 Immunoglobulin-binding protein Sbi, domain IV RK98_RS07985 787bf11702d0d57f4076374f3b7cdaaf 426 SUPERFAMILY SSF46997 40 99 1.12E-21 T 28-03-2018 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 RK98_RS02035 68971af9a777f085027762734314f917 790 SMART SM00316 629 711 2.8E-17 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS02035 68971af9a777f085027762734314f917 790 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site RK98_RS02035 68971af9a777f085027762734314f917 790 Gene3D G3DSA:2.40.50.140 56 137 0.024 T 28-03-2018 RK98_RS02035 68971af9a777f085027762734314f917 790 SUPERFAMILY SSF50249 211 629 1.31E-142 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS02035 68971af9a777f085027762734314f917 790 Gene3D G3DSA:2.40.50.140 631 788 2.4E-22 T 28-03-2018 RK98_RS02035 68971af9a777f085027762734314f917 790 Gene3D G3DSA:2.40.50.140 138 287 0.0069 T 28-03-2018 RK98_RS02035 68971af9a777f085027762734314f917 790 SUPERFAMILY SSF50249 66 134 1.56E-13 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS02035 68971af9a777f085027762734314f917 790 Gene3D G3DSA:1.10.10.10 2 55 1.9E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02035 68971af9a777f085027762734314f917 790 SMART SM00357 74 136 1.4E-6 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 RK98_RS02035 68971af9a777f085027762734314f917 790 SMART SM00357 141 205 0.0024 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 RK98_RS02035 68971af9a777f085027762734314f917 790 TIGRFAM TIGR02063 RNase_R: ribonuclease R 1 711 9.8E-290 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RK98_RS02035 68971af9a777f085027762734314f917 790 SMART SM00955 251 581 2.3E-168 T 28-03-2018 RK98_RS02035 68971af9a777f085027762734314f917 790 Pfam PF00773 RNB domain 251 579 1.4E-110 T 28-03-2018 RK98_RS02035 68971af9a777f085027762734314f917 790 Pfam PF08206 Ribonuclease B OB domain 75 133 4.1E-17 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain RK98_RS02035 68971af9a777f085027762734314f917 790 Pfam PF08206 Ribonuclease B OB domain 151 201 4.9E-10 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain RK98_RS02035 68971af9a777f085027762734314f917 790 Pfam PF00575 S1 RNA binding domain 630 709 2.0E-16 T 28-03-2018 IPR003029 S1 domain GO:0003676 RK98_RS02035 68971af9a777f085027762734314f917 790 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 62 711 2.0E-220 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 RK98_RS02035 68971af9a777f085027762734314f917 790 SUPERFAMILY SSF50249 630 708 1.07E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS02035 68971af9a777f085027762734314f917 790 Hamap MF_01895 Ribonuclease R [rnr]. 22 711 57.737 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 RK98_RS02035 68971af9a777f085027762734314f917 790 SUPERFAMILY SSF50249 129 228 1.08E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS10640 3e8dc787198b7a81bcb426e462513fe2 82 Pfam PF06194 Phage Conserved Open Reading Frame 51 3 82 1.4E-56 T 28-03-2018 IPR009338 Protein of unknown function Orf51 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 Gene3D G3DSA:1.25.40.10 316 414 3.3E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 SMART SM00028 200 233 74.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 SMART SM00028 96 129 17.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 SMART SM00028 130 163 290.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 SMART SM00028 167 197 370.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 SMART SM00028 234 267 79.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 SMART SM00028 373 402 410.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 SUPERFAMILY SSF48452 31 193 4.07E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 Gene3D G3DSA:1.25.40.10 13 181 1.6E-22 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 Gene3D G3DSA:1.25.40.10 182 263 4.4E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 SUPERFAMILY SSF48452 352 405 8.53E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 SUPERFAMILY SSF48452 170 304 8.53E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS13820 778149a66b0d82c6b7a41891ac40a767 414 Gene3D G3DSA:1.25.40.10 264 315 8.5E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS03635 440e265d936438f5b41c7ba10e22b771 100 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 92 29.006 T 28-03-2018 IPR007170 Stage V sporulation protein G GO:0030435 RK98_RS03635 440e265d936438f5b41c7ba10e22b771 100 Pfam PF04026 SpoVG 1 81 4.6E-36 T 28-03-2018 IPR007170 Stage V sporulation protein G GO:0030435 RK98_RS03635 440e265d936438f5b41c7ba10e22b771 100 SUPERFAMILY SSF160537 1 83 7.72E-33 T 28-03-2018 IPR007170 Stage V sporulation protein G GO:0030435 RK98_RS03635 440e265d936438f5b41c7ba10e22b771 100 Gene3D G3DSA:3.30.1120.40 1 83 2.0E-36 T 28-03-2018 IPR007170 Stage V sporulation protein G GO:0030435 RK98_RS02655 62b0865ba206cf5d637ba70c83df23d0 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 53.641 T 28-03-2018 IPR026562 Probable transcriptional regulatory protein YeeN RK98_RS02655 62b0865ba206cf5d637ba70c83df23d0 238 Pfam PF01709 Transcriptional regulator 4 235 6.6E-79 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS02655 62b0865ba206cf5d637ba70c83df23d0 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 6.1E-68 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS02655 62b0865ba206cf5d637ba70c83df23d0 238 SUPERFAMILY SSF75625 1 237 9.29E-80 T 28-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS02655 62b0865ba206cf5d637ba70c83df23d0 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 30.299 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS02655 62b0865ba206cf5d637ba70c83df23d0 238 Gene3D G3DSA:1.10.10.200 2 76 1.4E-25 T 28-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like RK98_RS02655 62b0865ba206cf5d637ba70c83df23d0 238 Gene3D G3DSA:3.30.70.980 80 174 1.2E-25 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS02655 62b0865ba206cf5d637ba70c83df23d0 238 Gene3D G3DSA:3.30.70.980 175 238 2.6E-8 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 SUPERFAMILY SSF47384 315 395 1.33E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 213 328 1.3E-5 T 28-03-2018 IPR000014 PAS domain RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 SMART SM00388 329 396 1.6E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 Pfam PF00512 His Kinase A (phospho-acceptor) domain 330 395 2.9E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 491 1.7E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 505 1.7E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 530 1.7E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 549 1.7E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 Gene3D G3DSA:1.10.287.130 335 392 9.0E-18 T 28-03-2018 RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 SUPERFAMILY SSF55785 202 321 3.32E-9 T 28-03-2018 IPR000014 PAS domain RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 SUPERFAMILY SSF55874 386 549 4.32E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 Gene3D G3DSA:3.30.565.10 401 552 3.4E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 Gene3D G3DSA:3.30.450.20 211 334 3.8E-16 T 28-03-2018 RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 442 550 6.4E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS15030 99ae4cd14b3cd09589733b27949e056a 553 SMART SM00387 440 552 3.8E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS02710 049a768cda82f102474ac09c9582dc16 307 Gene3D G3DSA:3.40.50.720 1 202 3.2E-7 T 28-03-2018 RK98_RS02710 049a768cda82f102474ac09c9582dc16 307 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 71 8.3E-5 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 RK98_RS02710 049a768cda82f102474ac09c9582dc16 307 SUPERFAMILY SSF51735 1 184 5.12E-13 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS01090 b4f2f3bd839fdff2cd782a6eae4e9c4e 316 SUPERFAMILY SSF52283 12 108 2.55E-14 T 28-03-2018 RK98_RS01090 b4f2f3bd839fdff2cd782a6eae4e9c4e 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 12 302 3.5E-12 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RK98_RS01090 b4f2f3bd839fdff2cd782a6eae4e9c4e 316 Gene3D G3DSA:3.40.50.720 1 109 1.9E-17 T 28-03-2018 RK98_RS01090 b4f2f3bd839fdff2cd782a6eae4e9c4e 316 Gene3D G3DSA:3.40.50.720 110 280 1.1E-41 T 28-03-2018 RK98_RS01090 b4f2f3bd839fdff2cd782a6eae4e9c4e 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 277 1.5E-49 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RK98_RS01090 b4f2f3bd839fdff2cd782a6eae4e9c4e 316 SUPERFAMILY SSF51735 100 277 1.17E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS13115 b48bd647e468ca64da5af3b1ad15f782 484 ProSitePatterns PS00218 Amino acid permeases signature. 39 70 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RK98_RS13115 b48bd647e468ca64da5af3b1ad15f782 484 Pfam PF00324 Amino acid permease 14 469 2.1E-122 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RK98_RS13115 b48bd647e468ca64da5af3b1ad15f782 484 PIRSF PIRSF006060 1 483 1.0E-75 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 36 46 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 Gene3D G3DSA:2.40.37.10 227 378 3.1E-54 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 SMART SM01005 244 369 3.4E-63 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 SUPERFAMILY SSF51419 13 243 1.24E-62 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 Pfam PF00842 Alanine racemase, C-terminal domain 246 368 4.0E-42 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 SUPERFAMILY SSF50621 239 378 2.09E-49 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 PRINTS PR00992 Alanine racemase signature 260 275 4.8E-62 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 PRINTS PR00992 Alanine racemase signature 31 47 4.8E-62 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 PRINTS PR00992 Alanine racemase signature 351 364 4.8E-62 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 PRINTS PR00992 Alanine racemase signature 164 175 4.8E-62 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 PRINTS PR00992 Alanine racemase signature 202 229 4.8E-62 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 PRINTS PR00992 Alanine racemase signature 129 141 4.8E-62 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 PRINTS PR00992 Alanine racemase signature 277 292 4.8E-62 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 PRINTS PR00992 Alanine racemase signature 67 85 4.8E-62 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 PRINTS PR00992 Alanine racemase signature 297 314 4.8E-62 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 Gene3D G3DSA:3.20.20.10 6 226 2.4E-45 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 TIGRFAM TIGR00492 alr: alanine racemase 8 368 6.0E-112 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 Hamap MF_01201 Alanine racemase. 6 369 33.209 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09900 8b657acc57210f889de7c7631d9289a3 382 Pfam PF01168 Alanine racemase, N-terminal domain 13 229 3.9E-66 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS12930 b4cf817d6fedbbe74e32d12cfe623b89 311 Pfam PF01715 IPP transferase 41 289 1.6E-79 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RK98_RS12930 b4cf817d6fedbbe74e32d12cfe623b89 311 SUPERFAMILY SSF52540 8 121 3.23E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12930 b4cf817d6fedbbe74e32d12cfe623b89 311 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 304 28.83 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RK98_RS12930 b4cf817d6fedbbe74e32d12cfe623b89 311 Gene3D G3DSA:3.40.50.300 4 202 2.8E-66 T 28-03-2018 RK98_RS12930 b4cf817d6fedbbe74e32d12cfe623b89 311 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 8 296 1.5E-97 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 RK98_RS12930 b4cf817d6fedbbe74e32d12cfe623b89 311 Gene3D G3DSA:1.10.287.890 205 285 6.4E-28 T 28-03-2018 RK98_RS12930 b4cf817d6fedbbe74e32d12cfe623b89 311 SUPERFAMILY SSF52540 5 79 2.66E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12930 b4cf817d6fedbbe74e32d12cfe623b89 311 SUPERFAMILY SSF52540 148 216 2.66E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12930 b4cf817d6fedbbe74e32d12cfe623b89 311 SUPERFAMILY SSF52540 256 310 2.66E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 Gene3D G3DSA:3.40.228.10 223 634 9.9E-94 T 28-03-2018 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 6 1228 0.0 T 28-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 Pfam PF00384 Molybdopterin oxidoreductase 105 820 2.0E-161 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 SUPERFAMILY SSF53706 7 1057 0.0 T 28-03-2018 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 SMART SM00926 40 102 4.3E-6 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 Pfam PF01568 Molydopterin dinucleotide binding domain 1080 1190 5.9E-21 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 6 37 2.7E-9 T 28-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 SUPERFAMILY SSF50692 1076 1227 1.15E-45 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 Gene3D G3DSA:3.40.50.740 635 982 5.0E-37 T 28-03-2018 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1118 1145 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 63 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 Gene3D G3DSA:2.40.40.20 1041 1229 6.7E-44 T 28-03-2018 RK98_RS08115 a6f2f32ee6e239d8cdf70592e39c0d2b 1229 Gene3D G3DSA:2.20.25.90 52 95 1.6E-27 T 28-03-2018 RK98_RS05955 167a250e574470c854ac945737edb057 673 Gene3D G3DSA:3.40.1110.10 315 436 2.5E-19 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RK98_RS05955 167a250e574470c854ac945737edb057 673 SUPERFAMILY SSF81665 29 99 1.2E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 RK98_RS05955 167a250e574470c854ac945737edb057 673 SUPERFAMILY SSF81665 205 296 1.2E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 RK98_RS05955 167a250e574470c854ac945737edb057 673 SUPERFAMILY SSF81665 566 624 1.2E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 RK98_RS05955 167a250e574470c854ac945737edb057 673 Pfam PF00122 E1-E2 ATPase 102 279 8.7E-35 T 28-03-2018 RK98_RS05955 167a250e574470c854ac945737edb057 673 Pfam PF00702 haloacid dehalogenase-like hydrolase 298 523 2.0E-34 T 28-03-2018 RK98_RS05955 167a250e574470c854ac945737edb057 673 Gene3D G3DSA:1.20.1110.10 63 314 2.4E-23 T 28-03-2018 RK98_RS05955 167a250e574470c854ac945737edb057 673 SUPERFAMILY SSF81653 108 204 7.72E-21 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 RK98_RS05955 167a250e574470c854ac945737edb057 673 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 7 673 38.727 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RK98_RS05955 167a250e574470c854ac945737edb057 673 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 304 310 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RK98_RS05955 167a250e574470c854ac945737edb057 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 544 1.2E-22 T 28-03-2018 RK98_RS05955 167a250e574470c854ac945737edb057 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 1.2E-22 T 28-03-2018 RK98_RS05955 167a250e574470c854ac945737edb057 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 509 528 1.2E-22 T 28-03-2018 RK98_RS05955 167a250e574470c854ac945737edb057 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 302 316 1.2E-22 T 28-03-2018 RK98_RS05955 167a250e574470c854ac945737edb057 673 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 456 466 1.2E-22 T 28-03-2018 RK98_RS05955 167a250e574470c854ac945737edb057 673 Gene3D G3DSA:3.40.50.1000 437 568 1.5E-33 T 28-03-2018 IPR023214 HAD-like domain RK98_RS05955 167a250e574470c854ac945737edb057 673 SUPERFAMILY SSF56784 349 397 2.47E-37 T 28-03-2018 IPR023214 HAD-like domain RK98_RS05955 167a250e574470c854ac945737edb057 673 SUPERFAMILY SSF56784 290 314 2.47E-37 T 28-03-2018 IPR023214 HAD-like domain RK98_RS05955 167a250e574470c854ac945737edb057 673 SUPERFAMILY SSF56784 428 551 2.47E-37 T 28-03-2018 IPR023214 HAD-like domain RK98_RS05955 167a250e574470c854ac945737edb057 673 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 598 2.5E-80 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RK98_RS05955 167a250e574470c854ac945737edb057 673 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 4 669 0.0 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RK98_RS11695 0066d5d3e1f4015fc31d24964b8b91e5 466 SMART SM00382 28 205 2.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS11695 0066d5d3e1f4015fc31d24964b8b91e5 466 SMART SM00382 276 456 6.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS11695 0066d5d3e1f4015fc31d24964b8b91e5 466 Gene3D G3DSA:3.40.50.300 242 465 5.3E-42 T 28-03-2018 RK98_RS11695 0066d5d3e1f4015fc31d24964b8b91e5 466 SUPERFAMILY SSF52540 2 218 2.03E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11695 0066d5d3e1f4015fc31d24964b8b91e5 466 Gene3D G3DSA:3.40.50.300 1 229 5.7E-45 T 28-03-2018 RK98_RS11695 0066d5d3e1f4015fc31d24964b8b91e5 466 Pfam PF00005 ABC transporter 271 407 1.5E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS11695 0066d5d3e1f4015fc31d24964b8b91e5 466 Pfam PF00005 ABC transporter 20 158 2.8E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS11695 0066d5d3e1f4015fc31d24964b8b91e5 466 SUPERFAMILY SSF52540 244 459 2.51E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11695 0066d5d3e1f4015fc31d24964b8b91e5 466 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 SUPERFAMILY SSF53901 1 267 9.09E-72 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 Gene3D G3DSA:3.40.47.10 140 271 1.3E-25 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 Gene3D G3DSA:3.40.47.10 1 139 2.5E-27 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 Gene3D G3DSA:3.40.47.10 272 390 1.9E-28 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 7.6E-137 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 PIRSF PIRSF000429 1 394 1.3E-124 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 Pfam PF02803 Thiolase, C-terminal domain 270 391 2.3E-44 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 SUPERFAMILY SSF53901 270 392 1.43E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 Pfam PF00108 Thiolase, N-terminal domain 5 261 3.0E-71 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RK98_RS05140 5944f5d5168d708d018c8cb51f267823 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 2.1E-18 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 SUPERFAMILY SSF50447 203 301 1.36E-31 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.2E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.2E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.2E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.2E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 Gene3D G3DSA:2.40.30.10 193 298 2.1E-32 T 28-03-2018 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 146 3.7E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.2E-60 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 7.4E-234 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 2.6E-34 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 SUPERFAMILY SSF50465 302 394 5.18E-37 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 Gene3D G3DSA:2.40.30.10 300 393 4.4E-33 T 28-03-2018 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 Gene3D G3DSA:3.40.50.300 1 74 1.0E-11 T 28-03-2018 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.031 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 SUPERFAMILY SSF52540 6 219 3.0E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03290 69b2d02360e234c05187a91eefccd1bf 394 Gene3D G3DSA:3.40.50.300 75 192 4.9E-31 T 28-03-2018 RK98_RS06235 10f52aac3e01432c274d7850259f98b8 427 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 28-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RK98_RS06235 10f52aac3e01432c274d7850259f98b8 427 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 28-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RK98_RS06235 10f52aac3e01432c274d7850259f98b8 427 Pfam PF00709 Adenylosuccinate synthetase 4 420 1.5E-176 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RK98_RS06235 10f52aac3e01432c274d7850259f98b8 427 SMART SM00788 3 422 2.0E-281 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RK98_RS06235 10f52aac3e01432c274d7850259f98b8 427 Gene3D G3DSA:3.90.170.10 265 427 8.3E-68 T 28-03-2018 RK98_RS06235 10f52aac3e01432c274d7850259f98b8 427 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 427 200.295 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RK98_RS06235 10f52aac3e01432c274d7850259f98b8 427 SUPERFAMILY SSF52540 1 426 2.44E-171 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06235 10f52aac3e01432c274d7850259f98b8 427 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 425 2.6E-179 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 RK98_RS06235 10f52aac3e01432c274d7850259f98b8 427 Gene3D G3DSA:3.40.440.10 152 264 2.7E-24 T 28-03-2018 RK98_RS06235 10f52aac3e01432c274d7850259f98b8 427 Gene3D G3DSA:3.40.440.10 1 151 5.3E-51 T 28-03-2018 RK98_RS11340 7ac57c4530de5ace0c9dc07262020a20 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS11340 7ac57c4530de5ace0c9dc07262020a20 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS11340 7ac57c4530de5ace0c9dc07262020a20 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS11340 7ac57c4530de5ace0c9dc07262020a20 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS11340 7ac57c4530de5ace0c9dc07262020a20 256 SUPERFAMILY SSF51735 5 254 1.91E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS11340 7ac57c4530de5ace0c9dc07262020a20 256 Gene3D G3DSA:3.40.50.720 1 256 1.5E-42 T 28-03-2018 RK98_RS11340 7ac57c4530de5ace0c9dc07262020a20 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 1.0E-80 T 28-03-2018 RK98_RS11340 7ac57c4530de5ace0c9dc07262020a20 256 PIRSF PIRSF000094 1 256 4.4E-93 T 28-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 SMART SM00322 556 621 4.0E-11 T 28-03-2018 IPR004087 K Homology domain GO:0003676 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 SMART SM00316 624 694 6.2E-26 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 695 0.0 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Pfam PF00575 S1 RNA binding domain 623 693 8.1E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 SUPERFAMILY SSF46915 239 324 8.63E-16 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Gene3D G3DSA:3.30.230.70 315 558 4.3E-59 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Gene3D G3DSA:2.40.50.140 631 698 6.0E-23 T 28-03-2018 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Gene3D G3DSA:3.30.230.70 12 248 2.4E-57 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Pfam PF01138 3' exoribonuclease family, domain 1 14 144 6.3E-23 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Pfam PF01138 3' exoribonuclease family, domain 1 327 460 3.5E-16 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 697 30.834 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 SUPERFAMILY SSF54211 8 144 3.39E-49 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 3.0E-15 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Pfam PF03725 3' exoribonuclease family, domain 2 463 532 3.8E-8 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Gene3D G3DSA:1.10.10.400 249 314 1.1E-17 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 SUPERFAMILY SSF55666 145 235 7.46E-28 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Gene3D G3DSA:3.30.1370.10 559 630 5.0E-13 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 SUPERFAMILY SSF54791 559 643 2.77E-21 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 324 2.4E-13 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 SUPERFAMILY SSF50249 624 697 8.58E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 Pfam PF00013 KH domain 560 618 7.4E-9 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 SUPERFAMILY SSF55666 454 552 1.54E-29 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 PIRSF PIRSF005499 2 698 2.5E-298 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 RK98_RS12785 1055876a95862cac72a1bf7bf3c08879 698 SUPERFAMILY SSF54211 298 491 2.73E-47 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS10170 58970a57f45bbc4e343114f2af56c7c3 72 SMART SM00530 9 64 1.7E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS10170 58970a57f45bbc4e343114f2af56c7c3 72 SUPERFAMILY SSF47413 8 68 2.29E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS10170 58970a57f45bbc4e343114f2af56c7c3 72 Gene3D G3DSA:1.10.260.40 5 72 2.2E-13 T 28-03-2018 RK98_RS10170 58970a57f45bbc4e343114f2af56c7c3 72 Pfam PF01381 Helix-turn-helix 17 64 3.1E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS03945 da93bd619373ac89bea990cb6712639b 441 SUPERFAMILY SSF53474 11 249 3.46E-15 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS03945 da93bd619373ac89bea990cb6712639b 441 Gene3D G3DSA:3.40.50.1820 11 351 4.8E-15 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 SUPERFAMILY SSF52794 383 473 3.14E-7 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 530 546 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 Pfam PF08279 HTH domain 4 61 3.8E-13 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 SUPERFAMILY SSF55804 497 611 1.44E-20 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 Pfam PF00874 PRD domain 285 374 3.9E-21 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 Gene3D G3DSA:3.40.50.2300 380 476 1.5E-14 T 28-03-2018 RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 Gene3D G3DSA:1.10.10.10 1 66 1.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 SUPERFAMILY SSF46785 4 62 3.47E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 Gene3D G3DSA:1.10.10.10 79 146 0.0058 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 Gene3D G3DSA:1.10.1790.10 275 378 1.1E-20 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 Gene3D G3DSA:1.10.1790.10 175 274 0.011 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 SUPERFAMILY SSF63520 172 256 1.96E-5 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 494 622 2.3E-18 T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 Gene3D G3DSA:3.40.930.10 485 624 8.9E-21 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS06700 4dd9b7fc435bae403cc2e05ccca6ef37 624 SUPERFAMILY SSF63520 264 377 3.79E-21 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS05790 c58c87509239ce0a0528df1b795fdfe7 462 SUPERFAMILY SSF103473 1 199 1.57E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS05790 c58c87509239ce0a0528df1b795fdfe7 462 SUPERFAMILY SSF103473 247 458 1.57E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS05790 c58c87509239ce0a0528df1b795fdfe7 462 Gene3D G3DSA:1.20.1250.20 4 198 6.5E-27 T 28-03-2018 RK98_RS05790 c58c87509239ce0a0528df1b795fdfe7 462 Gene3D G3DSA:1.20.1250.20 256 462 5.9E-23 T 28-03-2018 RK98_RS05790 c58c87509239ce0a0528df1b795fdfe7 462 Pfam PF07690 Major Facilitator Superfamily 17 408 3.8E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS06110 605d7ffd8ffc54ef70e238d7d528b4d7 123 Gene3D G3DSA:1.10.4040.10 73 122 4.2E-13 T 28-03-2018 RK98_RS06110 605d7ffd8ffc54ef70e238d7d528b4d7 123 PIRSF PIRSF019455 1 123 6.3E-35 T 28-03-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RK98_RS06110 605d7ffd8ffc54ef70e238d7d528b4d7 123 SUPERFAMILY SSF46785 6 122 5.64E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06110 605d7ffd8ffc54ef70e238d7d528b4d7 123 Gene3D G3DSA:1.10.10.10 9 72 1.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06110 605d7ffd8ffc54ef70e238d7d528b4d7 123 Pfam PF03965 Penicillinase repressor 8 121 2.8E-37 T 28-03-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 Gene3D G3DSA:3.40.47.10 1 142 4.4E-35 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 Gene3D G3DSA:3.40.47.10 147 267 6.1E-29 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 389 3.8E-150 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 PIRSF PIRSF000429 1 393 1.8E-137 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 Pfam PF02803 Thiolase, C-terminal domain 271 390 2.0E-44 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 SUPERFAMILY SSF53901 271 389 1.39E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 SUPERFAMILY SSF53901 4 270 2.38E-91 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 Pfam PF00108 Thiolase, N-terminal domain 4 263 7.3E-108 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RK98_RS04465 7f5c01d0e80f9b296184f4af3b972bd1 393 Gene3D G3DSA:3.40.47.10 268 389 3.0E-30 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 SUPERFAMILY SSF51735 5 255 3.84E-82 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.6E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.6E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.6E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 8.0E-70 T 28-03-2018 RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 6.4E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.4E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.4E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.4E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.4E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.4E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 Gene3D G3DSA:3.40.50.720 41 265 2.7E-65 T 28-03-2018 RK98_RS07660 497bb265669c8daff7333d0bf430772f 272 Gene3D G3DSA:3.40.50.720 1 40 1.5E-8 T 28-03-2018 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 Gene3D G3DSA:1.10.274.10 29 136 1.8E-36 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 PIRSF PIRSF000732 1 572 1.3E-223 T 28-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 SUPERFAMILY SSF52009 127 246 2.75E-36 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 186 197 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 128 6.9E-32 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 Gene3D G3DSA:3.50.30.10 137 256 3.2E-28 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 SUPERFAMILY SSF51621 252 551 1.15E-111 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 568 1.3E-245 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 449 467 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 540 2.4E-128 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 Gene3D G3DSA:3.20.20.60 257 572 1.1E-101 T 28-03-2018 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 449 464 5.8E-32 T 28-03-2018 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 502 514 5.8E-32 T 28-03-2018 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 295 314 5.8E-32 T 28-03-2018 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 466 481 5.8E-32 T 28-03-2018 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 227 5.3E-23 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 RK98_RS11740 9e06f7062709a4faeaa9e2f92b7395c2 572 SUPERFAMILY SSF47831 34 145 1.31E-34 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 RK98_RS05590 5ba502fe19398afa81ec9b029e98c192 266 Gene3D G3DSA:1.10.3720.10 18 266 1.4E-26 T 28-03-2018 RK98_RS05590 5ba502fe19398afa81ec9b029e98c192 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 258 8.4E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS05590 5ba502fe19398afa81ec9b029e98c192 266 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 17 265 1.4E-92 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 RK98_RS05590 5ba502fe19398afa81ec9b029e98c192 266 SUPERFAMILY SSF161098 71 258 3.14E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS14475 891426bd5e6d6c2e63fce49dcc286796 153 PIRSF PIRSF006019 1 149 1.2E-60 T 28-03-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RK98_RS14475 891426bd5e6d6c2e63fce49dcc286796 153 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 116 9.2E-31 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain RK98_RS14475 891426bd5e6d6c2e63fce49dcc286796 153 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 2 151 1.5E-88 T 28-03-2018 IPR013404 Competence operon E, ComEB RK98_RS14475 891426bd5e6d6c2e63fce49dcc286796 153 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 105 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RK98_RS14475 891426bd5e6d6c2e63fce49dcc286796 153 Gene3D G3DSA:3.40.140.10 3 149 1.3E-42 T 28-03-2018 RK98_RS14475 891426bd5e6d6c2e63fce49dcc286796 153 SUPERFAMILY SSF53927 8 142 4.25E-43 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 Gene3D G3DSA:3.50.50.60 1 118 0.0012 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 1.4E-6 T 28-03-2018 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 272 1.4E-6 T 28-03-2018 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.4E-6 T 28-03-2018 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 95 113 1.4E-6 T 28-03-2018 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 SUPERFAMILY SSF51905 28 296 7.45E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 284 6.8E-39 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 Gene3D G3DSA:3.50.50.60 119 150 0.0017 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 9.8E-7 T 28-03-2018 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 167 9.8E-7 T 28-03-2018 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 272 9.8E-7 T 28-03-2018 RK98_RS10985 6cf60a056574c4dc350d1bd904eda232 354 Gene3D G3DSA:3.50.50.60 151 299 7.0E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS12605 eac9602e119e8f779592de1cd3199a87 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 5 115 2.1E-50 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12605 eac9602e119e8f779592de1cd3199a87 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 28-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12605 eac9602e119e8f779592de1cd3199a87 116 PRINTS PR00061 Ribosomal protein L19 signature 6 35 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12605 eac9602e119e8f779592de1cd3199a87 116 PRINTS PR00061 Ribosomal protein L19 signature 36 65 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12605 eac9602e119e8f779592de1cd3199a87 116 PRINTS PR00061 Ribosomal protein L19 signature 90 115 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12605 eac9602e119e8f779592de1cd3199a87 116 Pfam PF01245 Ribosomal protein L19 6 114 1.9E-52 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12605 eac9602e119e8f779592de1cd3199a87 116 PIRSF PIRSF002191 1 116 4.2E-51 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12605 eac9602e119e8f779592de1cd3199a87 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 4 116 32.292 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12605 eac9602e119e8f779592de1cd3199a87 116 SUPERFAMILY SSF50104 3 115 2.11E-48 T 28-03-2018 IPR008991 Translation protein SH3-like domain RK98_RS01770 82bbe6dd91f79a211c7a38e04fd0b841 297 Gene3D G3DSA:1.10.10.630 159 237 2.0E-16 T 28-03-2018 IPR034829 DnaD-like domain RK98_RS01770 82bbe6dd91f79a211c7a38e04fd0b841 297 Pfam PF07261 Replication initiation and membrane attachment 165 238 3.1E-12 T 28-03-2018 IPR006343 DnaD domain RK98_RS01770 82bbe6dd91f79a211c7a38e04fd0b841 297 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 165 237 1.9E-22 T 28-03-2018 IPR006343 DnaD domain RK98_RS01770 82bbe6dd91f79a211c7a38e04fd0b841 297 SUPERFAMILY SSF158499 165 231 6.02E-12 T 28-03-2018 IPR006343 DnaD domain RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 SUPERFAMILY SSF52540 101 380 4.9E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 Pfam PF07498 Rho termination factor, N-terminal domain 19 59 2.0E-11 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 426 199.231 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 SMART SM00959 17 59 4.3E-10 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 Gene3D G3DSA:2.40.50.140 15 137 7.3E-39 T 28-03-2018 RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 167 372 5.6E-21 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 SUPERFAMILY SSF50249 62 135 2.14E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 SMART SM00357 64 129 4.2E-13 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 TIGRFAM TIGR00767 rho: transcription termination factor Rho 19 424 8.2E-188 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 Gene3D G3DSA:3.40.50.300 140 426 4.9E-49 T 28-03-2018 RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 SUPERFAMILY SSF68912 19 59 5.89E-7 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 SMART SM00382 178 364 1.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS09615 a4d75e8e1952b9380b10e2116b0ba685 438 Pfam PF07497 Rho termination factor, RNA-binding domain 63 135 3.4E-28 T 28-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 RK98_RS06065 a766b8bf443a04ae6b72e45f946231c8 220 Pfam PF08241 Methyltransferase domain 40 132 8.9E-22 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RK98_RS06065 a766b8bf443a04ae6b72e45f946231c8 220 Gene3D G3DSA:3.40.50.150 2 207 1.1E-28 T 28-03-2018 RK98_RS06065 a766b8bf443a04ae6b72e45f946231c8 220 SUPERFAMILY SSF53335 8 165 7.15E-35 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS14820 a766b8bf443a04ae6b72e45f946231c8 220 Pfam PF08241 Methyltransferase domain 40 132 8.9E-22 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 RK98_RS14820 a766b8bf443a04ae6b72e45f946231c8 220 Gene3D G3DSA:3.40.50.150 2 207 1.1E-28 T 28-03-2018 RK98_RS14820 a766b8bf443a04ae6b72e45f946231c8 220 SUPERFAMILY SSF53335 8 165 7.15E-35 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS09215 849b66b9009e7e2309f875c789f2570e 103 SUPERFAMILY SSF46973 1 102 6.02E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 RK98_RS09215 849b66b9009e7e2309f875c789f2570e 103 PIRSF PIRSF000699 1 103 1.2E-37 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 RK98_RS09215 849b66b9009e7e2309f875c789f2570e 103 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 4 102 1.8E-47 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 RK98_RS09215 849b66b9009e7e2309f875c789f2570e 103 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 101 1.4E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 RK98_RS09215 849b66b9009e7e2309f875c789f2570e 103 Gene3D G3DSA:1.20.58.80 4 102 1.0E-35 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 RK98_RS08770 43b8e6611601fa35ebb4e5e5bf2881d8 164 Pfam PF01967 MoaC family 15 153 6.3E-53 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 RK98_RS08770 43b8e6611601fa35ebb4e5e5bf2881d8 164 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 155 5.2E-60 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 RK98_RS08770 43b8e6611601fa35ebb4e5e5bf2881d8 164 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 161 35.723 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 RK98_RS08770 43b8e6611601fa35ebb4e5e5bf2881d8 164 SUPERFAMILY SSF55040 11 158 6.28E-56 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 RK98_RS08770 43b8e6611601fa35ebb4e5e5bf2881d8 164 Gene3D G3DSA:3.30.70.640 2 161 1.2E-66 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Gene3D G3DSA:1.10.1790.10 161 281 2.3E-16 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Gene3D G3DSA:3.40.930.10 500 636 2.3E-21 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 505 632 3.6E-20 T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 SUPERFAMILY SSF63520 291 392 4.58E-23 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Gene3D G3DSA:3.40.50.2300 398 488 9.9E-20 T 28-03-2018 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 SUPERFAMILY SSF46785 85 130 5.9E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 SUPERFAMILY SSF46785 4 46 9.98E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 SUPERFAMILY SSF55804 502 632 2.09E-24 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Gene3D G3DSA:1.10.10.10 2 67 1.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Gene3D G3DSA:1.10.10.10 83 150 2.9E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 SUPERFAMILY SSF63520 175 278 7.06E-18 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Gene3D G3DSA:1.10.1790.10 289 393 9.8E-23 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 SUPERFAMILY SSF52794 399 479 4.39E-11 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Pfam PF05043 Mga helix-turn-helix domain 77 163 4.2E-8 T 28-03-2018 IPR007737 Mga helix-turn-helix domain RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Pfam PF08279 HTH domain 5 45 2.5E-7 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Pfam PF00874 PRD domain 300 388 5.2E-22 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS04585 3e145fe2cec8a3b4cdd3240b0025e179 651 Pfam PF00874 PRD domain 199 276 1.1E-14 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS12865 5f262dccf33a13593a52c9ab577ad710 586 SUPERFAMILY SSF52518 199 459 5.47E-71 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS12865 5f262dccf33a13593a52c9ab577ad710 586 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 476 569 4.7E-10 T 28-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II RK98_RS12865 5f262dccf33a13593a52c9ab577ad710 586 SUPERFAMILY SSF52922 472 582 3.14E-23 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RK98_RS12865 5f262dccf33a13593a52c9ab577ad710 586 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 5 574 8.0E-215 T 28-03-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 RK98_RS12865 5f262dccf33a13593a52c9ab577ad710 586 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 175 1.7E-39 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RK98_RS12865 5f262dccf33a13593a52c9ab577ad710 586 Gene3D G3DSA:3.40.50.970 197 500 2.2E-59 T 28-03-2018 RK98_RS12865 5f262dccf33a13593a52c9ab577ad710 586 Gene3D G3DSA:3.40.920.10 2 181 6.8E-40 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 RK98_RS12865 5f262dccf33a13593a52c9ab577ad710 586 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 210 452 3.2E-63 T 28-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 RK98_RS12865 5f262dccf33a13593a52c9ab577ad710 586 SUPERFAMILY SSF53323 4 221 5.75E-42 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 RK98_RS00610 d026ca592854531df528d5210100d88a 239 Gene3D G3DSA:2.40.10.10 47 137 9.1E-14 T 28-03-2018 RK98_RS00610 d026ca592854531df528d5210100d88a 239 Gene3D G3DSA:2.40.10.10 138 239 2.5E-16 T 28-03-2018 RK98_RS00610 d026ca592854531df528d5210100d88a 239 ProSitePatterns PS00672 Serine proteases, V8 family, histidine active site. 61 75 - T 28-03-2018 IPR028301 Serine proteases, V8 family, histidine active site RK98_RS00610 d026ca592854531df528d5210100d88a 239 PRINTS PR00839 V8 serine protease family signature 60 77 2.2E-15 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00610 d026ca592854531df528d5210100d88a 239 PRINTS PR00839 V8 serine protease family signature 198 210 2.2E-15 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00610 d026ca592854531df528d5210100d88a 239 PRINTS PR00839 V8 serine protease family signature 40 57 2.2E-15 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00610 d026ca592854531df528d5210100d88a 239 PRINTS PR00839 V8 serine protease family signature 181 197 2.2E-15 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00610 d026ca592854531df528d5210100d88a 239 SUPERFAMILY SSF50494 1 236 3.05E-31 T 28-03-2018 IPR009003 Peptidase S1, PA clan RK98_RS00610 d026ca592854531df528d5210100d88a 239 Pfam PF13365 Trypsin-like peptidase domain 60 206 5.0E-17 T 28-03-2018 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 Hamap MF_01498 DNA repair protein RadA [radA]. 21 452 43.828 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 PRINTS PR01874 DNA repair protein radA signature 10 34 1.4E-93 T 28-03-2018 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 PRINTS PR01874 DNA repair protein radA signature 120 137 1.4E-93 T 28-03-2018 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 PRINTS PR01874 DNA repair protein radA signature 79 107 1.4E-93 T 28-03-2018 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 PRINTS PR01874 DNA repair protein radA signature 170 194 1.4E-93 T 28-03-2018 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 PRINTS PR01874 DNA repair protein radA signature 318 341 1.4E-93 T 28-03-2018 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 PRINTS PR01874 DNA repair protein radA signature 209 237 1.4E-93 T 28-03-2018 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 PRINTS PR01874 DNA repair protein radA signature 244 270 1.4E-93 T 28-03-2018 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 448 9.3E-201 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 SUPERFAMILY SSF52540 65 290 7.11E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 SUPERFAMILY SSF54211 299 452 3.03E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 SUPERFAMILY SSF54211 251 265 3.03E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 Pfam PF13481 AAA domain 79 218 2.0E-15 T 28-03-2018 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 Gene3D G3DSA:3.30.230.10 258 454 2.0E-35 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 SMART SM00382 87 240 1.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 Gene3D G3DSA:3.40.50.300 64 257 1.9E-20 T 28-03-2018 RK98_RS03415 0bd69894aaafd59db08b1e98deb48f35 454 Pfam PF13541 Subunit ChlI of Mg-chelatase 351 426 1.1E-6 T 28-03-2018 RK98_RS09200 e2afc9f089797dbc1d51e385e1d8c955 171 Gene3D G3DSA:3.40.1400.10 1 169 5.7E-55 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RK98_RS09200 e2afc9f089797dbc1d51e385e1d8c955 171 Hamap MF_01556 Galactose-6-phosphate isomerase subunit LacB [lacB]. 1 171 48.287 T 28-03-2018 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26 RK98_RS09200 e2afc9f089797dbc1d51e385e1d8c955 171 TIGRFAM TIGR01119 lacB: galactose-6-phosphate isomerase, LacB subunit 1 171 7.2E-113 T 28-03-2018 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26 RK98_RS09200 e2afc9f089797dbc1d51e385e1d8c955 171 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 4.2E-37 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RK98_RS09200 e2afc9f089797dbc1d51e385e1d8c955 171 PIRSF PIRSF005384 1 148 6.6E-50 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RK98_RS09200 e2afc9f089797dbc1d51e385e1d8c955 171 Pfam PF02502 Ribose/Galactose Isomerase 3 141 1.0E-41 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RK98_RS09200 e2afc9f089797dbc1d51e385e1d8c955 171 SUPERFAMILY SSF89623 1 149 1.11E-48 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RK98_RS05215 71719d925ba3b8324eaa0167c2d4fddd 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 272 2.6E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS05215 71719d925ba3b8324eaa0167c2d4fddd 279 Gene3D G3DSA:1.10.3720.10 1 266 2.8E-44 T 28-03-2018 RK98_RS05215 71719d925ba3b8324eaa0167c2d4fddd 279 SUPERFAMILY SSF161098 4 279 3.08E-68 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS14650 8c1d30e7ea374e8233d8ce079e8964c8 380 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site RK98_RS14650 8c1d30e7ea374e8233d8ce079e8964c8 380 SUPERFAMILY SSF53383 3 372 1.61E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS14650 8c1d30e7ea374e8233d8ce079e8964c8 380 Gene3D G3DSA:3.40.640.10 11 249 1.3E-61 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS14650 8c1d30e7ea374e8233d8ce079e8964c8 380 PIRSF PIRSF005572 1 380 5.7E-123 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RK98_RS14650 8c1d30e7ea374e8233d8ce079e8964c8 380 Pfam PF00266 Aminotransferase class-V 3 364 9.1E-79 T 28-03-2018 IPR000192 Aminotransferase class V domain RK98_RS14650 8c1d30e7ea374e8233d8ce079e8964c8 380 Gene3D G3DSA:3.90.1150.10 250 365 5.6E-28 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS11210 195928aeefd89327973939a843ff1793 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 5 410 6.1E-193 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 RK98_RS11210 195928aeefd89327973939a843ff1793 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site RK98_RS11210 195928aeefd89327973939a843ff1793 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 368 4.1E-38 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal RK98_RS11210 195928aeefd89327973939a843ff1793 414 SUPERFAMILY SSF53901 215 412 8.74E-72 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS11210 195928aeefd89327973939a843ff1793 414 SMART SM00825 Beta-ketoacyl synthase 7 414 8.4E-16 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain RK98_RS11210 195928aeefd89327973939a843ff1793 414 PIRSF PIRSF000447 2 414 4.2E-182 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 RK98_RS11210 195928aeefd89327973939a843ff1793 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 247 6.1E-61 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal RK98_RS11210 195928aeefd89327973939a843ff1793 414 Gene3D G3DSA:3.40.47.10 7 260 6.9E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS11210 195928aeefd89327973939a843ff1793 414 SUPERFAMILY SSF53901 4 252 2.82E-77 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS11210 195928aeefd89327973939a843ff1793 414 Gene3D G3DSA:3.40.47.10 263 414 1.3E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS11160 453a0ec3db598cf7c111e8ae3931f4da 604 Pfam PF01757 Acyltransferase family 17 347 3.6E-23 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 RK98_RS11160 453a0ec3db598cf7c111e8ae3931f4da 604 SUPERFAMILY SSF52266 447 602 3.16E-15 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain RK98_RS11160 453a0ec3db598cf7c111e8ae3931f4da 604 Gene3D G3DSA:3.40.50.1110 435 604 9.9E-15 T 28-03-2018 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 ProSitePatterns PS00672 Serine proteases, V8 family, histidine active site. 61 75 - T 28-03-2018 IPR028301 Serine proteases, V8 family, histidine active site RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 Gene3D G3DSA:2.40.10.10 125 240 2.5E-21 T 28-03-2018 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 SUPERFAMILY SSF50494 32 238 4.08E-36 T 28-03-2018 IPR009003 Peptidase S1, PA clan RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 PRINTS PR00839 V8 serine protease family signature 199 211 2.1E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 PRINTS PR00839 V8 serine protease family signature 40 57 2.1E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 PRINTS PR00839 V8 serine protease family signature 182 198 2.1E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 PRINTS PR00839 V8 serine protease family signature 89 101 2.1E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 PRINTS PR00839 V8 serine protease family signature 60 77 2.1E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 PRINTS PR00839 V8 serine protease family signature 148 161 2.1E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 Gene3D G3DSA:2.40.10.10 47 124 2.2E-9 T 28-03-2018 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 PRINTS PR01774 Exfoliative toxin signature 184 208 3.9E-10 T 28-03-2018 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 PRINTS PR01774 Exfoliative toxin signature 67 91 3.9E-10 T 28-03-2018 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RK98_RS00620 8fb8720f1261adfb9eacaef749fff700 240 Pfam PF00089 Trypsin 46 225 5.0E-26 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 RK98_RS13050 62666bbd8da1e72f58719b9e370ad43a 363 SUPERFAMILY SSF55874 248 358 2.75E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13050 62666bbd8da1e72f58719b9e370ad43a 363 Pfam PF07730 Histidine kinase 176 239 1.8E-16 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RK98_RS13050 62666bbd8da1e72f58719b9e370ad43a 363 SUPERFAMILY SSF103473 13 157 7.19E-5 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS13050 62666bbd8da1e72f58719b9e370ad43a 363 Gene3D G3DSA:3.30.565.10 193 359 2.4E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06500 085254bcc1cb16463709eff64a80df5b 204 Pfam PF01634 ATP phosphoribosyltransferase 53 198 1.3E-46 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RK98_RS06500 085254bcc1cb16463709eff64a80df5b 204 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 202 53.517 T 28-03-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 RK98_RS06500 085254bcc1cb16463709eff64a80df5b 204 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 178 3.7E-54 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 RK98_RS06500 085254bcc1cb16463709eff64a80df5b 204 Gene3D G3DSA:3.40.190.10 1 106 1.6E-28 T 28-03-2018 RK98_RS06500 085254bcc1cb16463709eff64a80df5b 204 SUPERFAMILY SSF53850 1 198 7.06E-57 T 28-03-2018 RK98_RS06500 085254bcc1cb16463709eff64a80df5b 204 Gene3D G3DSA:3.40.190.10 107 169 1.3E-24 T 28-03-2018 RK98_RS10035 39a24040a63737b909085e2fedb2aa7b 220 Gene3D G3DSA:3.30.420.40 1 137 9.1E-38 T 28-03-2018 RK98_RS10035 39a24040a63737b909085e2fedb2aa7b 220 SUPERFAMILY SSF53067 3 103 1.9E-27 T 28-03-2018 RK98_RS10035 39a24040a63737b909085e2fedb2aa7b 220 SUPERFAMILY SSF53067 108 203 6.09E-12 T 28-03-2018 RK98_RS10035 39a24040a63737b909085e2fedb2aa7b 220 Pfam PF00814 Glycoprotease family 25 148 6.3E-31 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS10035 39a24040a63737b909085e2fedb2aa7b 220 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 203 6.1E-53 T 28-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 RK98_RS00775 4d5204492c7bfe954aacad7c03a22b48 466 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 2 463 5.4E-115 T 28-03-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 RK98_RS00775 4d5204492c7bfe954aacad7c03a22b48 466 SUPERFAMILY SSF54373 306 413 7.36E-29 T 28-03-2018 RK98_RS00775 4d5204492c7bfe954aacad7c03a22b48 466 Pfam PF01593 Flavin containing amine oxidoreductase 12 463 2.2E-60 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 RK98_RS00775 4d5204492c7bfe954aacad7c03a22b48 466 Gene3D G3DSA:3.90.660.20 217 413 4.4E-39 T 28-03-2018 RK98_RS00775 4d5204492c7bfe954aacad7c03a22b48 466 Gene3D G3DSA:1.10.3110.10 107 205 2.7E-27 T 28-03-2018 RK98_RS00775 4d5204492c7bfe954aacad7c03a22b48 466 SUPERFAMILY SSF51905 431 462 8.88E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS00775 4d5204492c7bfe954aacad7c03a22b48 466 SUPERFAMILY SSF51905 3 321 8.88E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS00775 4d5204492c7bfe954aacad7c03a22b48 466 Gene3D G3DSA:3.40.50.720 1 95 9.4E-8 T 28-03-2018 RK98_RS02570 f442f34f80cf8b466bdcd1d7ec7c4de5 557 Gene3D G3DSA:1.20.1560.10 5 313 5.7E-26 T 28-03-2018 RK98_RS02570 f442f34f80cf8b466bdcd1d7ec7c4de5 557 Pfam PF00005 ABC transporter 347 487 9.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02570 f442f34f80cf8b466bdcd1d7ec7c4de5 557 SMART SM00382 356 532 1.1E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02570 f442f34f80cf8b466bdcd1d7ec7c4de5 557 Gene3D G3DSA:3.40.50.300 314 552 1.9E-56 T 28-03-2018 RK98_RS02570 f442f34f80cf8b466bdcd1d7ec7c4de5 557 SUPERFAMILY SSF90123 12 292 1.19E-39 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS02570 f442f34f80cf8b466bdcd1d7ec7c4de5 557 SUPERFAMILY SSF52540 327 552 1.01E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02570 f442f34f80cf8b466bdcd1d7ec7c4de5 557 Pfam PF00664 ABC transporter transmembrane region 13 282 1.7E-14 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS10700 317f89c886414d7795fcde63aff039a8 425 Pfam PF17288 Terminase RNAseH like domain 259 401 3.5E-34 T 28-03-2018 IPR035413 Phage terminase large subunit, C-terminal RK98_RS10700 317f89c886414d7795fcde63aff039a8 425 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 29 412 5.9E-119 T 28-03-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 RK98_RS10700 317f89c886414d7795fcde63aff039a8 425 Pfam PF04466 Phage terminase large subunit 28 227 3.2E-60 T 28-03-2018 IPR035412 Phage terminase large subunit, N-terminal RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 Gene3D G3DSA:2.60.40.1280 166 317 1.5E-37 T 28-03-2018 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 319 473 2.3E-36 T 28-03-2018 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 924 958 2.6E-6 T 28-03-2018 RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 Pfam PF02986 Fibronectin binding repeat 793 824 1.5E-10 T 28-03-2018 IPR004237 Fibronectin binding repeat RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 Pfam PF02986 Fibronectin binding repeat 754 792 2.1E-10 T 28-03-2018 IPR004237 Fibronectin binding repeat RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 Pfam PF02986 Fibronectin binding repeat 716 753 1.1E-9 T 28-03-2018 IPR004237 Fibronectin binding repeat RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 SUPERFAMILY SSF49401 166 312 1.57E-35 T 28-03-2018 IPR008966 Adhesion domain RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 Pfam PF00746 LPXTG cell wall anchor motif 917 960 4.5E-9 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 Gene3D G3DSA:2.60.40.1290 318 482 4.2E-48 T 28-03-2018 RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 Pfam PF04650 YSIRK type signal peptide 4 27 1.4E-7 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS07490 04710a44aaaf259a6da5e719bc5872d3 961 SUPERFAMILY SSF49401 316 506 1.57E-49 T 28-03-2018 IPR008966 Adhesion domain RK98_RS13690 983affd81f383514ad33806bfb28811e 372 SUPERFAMILY SSF52283 1 134 1.87E-53 T 28-03-2018 RK98_RS13690 983affd81f383514ad33806bfb28811e 372 SUPERFAMILY SSF52283 306 360 1.87E-53 T 28-03-2018 RK98_RS13690 983affd81f383514ad33806bfb28811e 372 SUPERFAMILY SSF51735 134 304 1.94E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS13690 983affd81f383514ad33806bfb28811e 372 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 139 353 1.1E-75 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RK98_RS13690 983affd81f383514ad33806bfb28811e 372 PIRSF PIRSF000183 1 372 1.2E-178 T 28-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 RK98_RS13690 983affd81f383514ad33806bfb28811e 372 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 5 134 1.6E-40 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RK98_RS13690 983affd81f383514ad33806bfb28811e 372 Gene3D G3DSA:3.40.50.720 1 189 7.5E-35 T 28-03-2018 RK98_RS13690 983affd81f383514ad33806bfb28811e 372 Gene3D G3DSA:3.40.50.720 190 372 1.3E-39 T 28-03-2018 RK98_RS13690 983affd81f383514ad33806bfb28811e 372 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 173 198 - T 28-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 RK98_RS13690 983affd81f383514ad33806bfb28811e 372 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 366 5.6E-119 T 28-03-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 RK98_RS13690 983affd81f383514ad33806bfb28811e 372 SMART SM01003 4 134 2.8E-58 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal RK98_RS13690 983affd81f383514ad33806bfb28811e 372 SMART SM01002 146 298 4.6E-65 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain RK98_RS13690 983affd81f383514ad33806bfb28811e 372 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 28-03-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 RK98_RS07735 8ff2689f45b7d8574f5a1f29e5d658a9 85 Gene3D G3DSA:3.40.1620.10 1 40 3.6E-15 T 28-03-2018 RK98_RS07735 8ff2689f45b7d8574f5a1f29e5d658a9 85 SUPERFAMILY SSF143120 1 70 9.16E-15 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RK98_RS07735 8ff2689f45b7d8574f5a1f29e5d658a9 85 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 7 54 3.5E-10 T 28-03-2018 RK98_RS07735 8ff2689f45b7d8574f5a1f29e5d658a9 85 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 68 2.1E-17 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RK98_RS13325 5328238f6514c5c2082bce649a59732c 260 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 255 33.947 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 RK98_RS13325 5328238f6514c5c2082bce649a59732c 260 Gene3D G3DSA:3.20.20.70 4 258 4.8E-56 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS13325 5328238f6514c5c2082bce649a59732c 260 SUPERFAMILY SSF51366 30 254 1.08E-71 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RK98_RS13325 5328238f6514c5c2082bce649a59732c 260 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 251 3.3E-75 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 RK98_RS13325 5328238f6514c5c2082bce649a59732c 260 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 64 - T 28-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 RK98_RS14780 ff6f3f83918a971ab3a659dc05797006 102 SUPERFAMILY SSF141091 1 101 4.05E-39 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14780 ff6f3f83918a971ab3a659dc05797006 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 26.572 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14780 ff6f3f83918a971ab3a659dc05797006 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 2.9E-41 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14780 ff6f3f83918a971ab3a659dc05797006 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 5.8E-40 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS13475 b9993b2fbfeba5c28101a4aa39d0e934 383 Gene3D G3DSA:3.40.630.10 3 209 2.7E-35 T 28-03-2018 RK98_RS13475 b9993b2fbfeba5c28101a4aa39d0e934 383 Gene3D G3DSA:3.40.630.10 239 382 7.4E-12 T 28-03-2018 RK98_RS13475 b9993b2fbfeba5c28101a4aa39d0e934 383 PIRSF PIRSF005962 1 383 5.8E-114 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 RK98_RS13475 b9993b2fbfeba5c28101a4aa39d0e934 383 SUPERFAMILY SSF55031 175 293 2.69E-16 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS13475 b9993b2fbfeba5c28101a4aa39d0e934 383 SUPERFAMILY SSF53187 5 191 3.14E-68 T 28-03-2018 RK98_RS13475 b9993b2fbfeba5c28101a4aa39d0e934 383 SUPERFAMILY SSF53187 292 380 3.14E-68 T 28-03-2018 RK98_RS13475 b9993b2fbfeba5c28101a4aa39d0e934 383 Pfam PF01546 Peptidase family M20/M25/M40 64 379 4.2E-34 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RK98_RS13475 b9993b2fbfeba5c28101a4aa39d0e934 383 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 8 366 2.2E-83 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 RK98_RS10480 07b6e48ced361a5fd3436e91683fbfc8 154 SUPERFAMILY SSF82649 3 138 8.16E-52 T 28-03-2018 RK98_RS10480 07b6e48ced361a5fd3436e91683fbfc8 154 Pfam PF01592 NifU-like N terminal domain 10 128 3.7E-34 T 28-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 RK98_RS10480 07b6e48ced361a5fd3436e91683fbfc8 154 Gene3D G3DSA:3.90.1010.10 3 140 1.5E-52 T 28-03-2018 RK98_RS10480 07b6e48ced361a5fd3436e91683fbfc8 154 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 138 3.0E-55 T 28-03-2018 RK98_RS04455 f9afe63b75d1be031a2e1a216c442777 742 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 415 737 1.4E-136 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RK98_RS04455 f9afe63b75d1be031a2e1a216c442777 742 PIRSF PIRSF000382 3 742 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RK98_RS04455 f9afe63b75d1be031a2e1a216c442777 742 Gene3D G3DSA:3.20.20.210 4 377 9.7E-109 T 28-03-2018 RK98_RS04455 f9afe63b75d1be031a2e1a216c442777 742 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 4 742 32.483 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RK98_RS04455 f9afe63b75d1be031a2e1a216c442777 742 Gene3D G3DSA:3.20.20.210 378 742 2.7E-113 T 28-03-2018 RK98_RS04455 f9afe63b75d1be031a2e1a216c442777 742 SUPERFAMILY SSF51726 388 741 7.19E-107 T 28-03-2018 RK98_RS04455 f9afe63b75d1be031a2e1a216c442777 742 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 9 742 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RK98_RS04455 f9afe63b75d1be031a2e1a216c442777 742 SUPERFAMILY SSF51726 6 370 7.59E-88 T 28-03-2018 RK98_RS04455 f9afe63b75d1be031a2e1a216c442777 742 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 6 309 6.6E-109 T 28-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 RK98_RS13655 a933e508570ea5a7282bd806e1baa33c 234 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 26 223 1.2E-57 T 28-03-2018 IPR003744 Queuosine precursor transporter RK98_RS13655 a933e508570ea5a7282bd806e1baa33c 234 Pfam PF02592 Putative vitamin uptake transporter 57 217 3.0E-43 T 28-03-2018 IPR003744 Queuosine precursor transporter RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 297 309 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 SUPERFAMILY SSF54631 65 207 1.12E-30 T 28-03-2018 RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 457 2.6E-199 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 Pfam PF00571 CBS domain 155 203 2.0E-8 T 28-03-2018 IPR000644 CBS domain RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 Pfam PF00571 CBS domain 97 144 6.7E-8 T 28-03-2018 IPR000644 CBS domain RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 PIRSF PIRSF000130 1 488 2.0E-206 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 SMART SM01240 9 475 0.0 T 28-03-2018 RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 SMART SM00116 98 148 4.5E-8 T 28-03-2018 IPR000644 CBS domain RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 SMART SM00116 161 208 2.2E-8 T 28-03-2018 IPR000644 CBS domain RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 475 2.5E-163 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 Gene3D G3DSA:3.20.20.70 3 483 3.9E-109 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 SUPERFAMILY SSF51412 219 479 3.92E-121 T 28-03-2018 RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 SUPERFAMILY SSF51412 5 92 3.92E-121 T 28-03-2018 RK98_RS04265 3ae967f5673ba318d8f8438937d20adb 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 488 81.981 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 RK98_RS08160 e5a09dccab1a721539e169caf1ad0398 389 Pfam PF07690 Major Facilitator Superfamily 15 342 1.3E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS08160 e5a09dccab1a721539e169caf1ad0398 389 Gene3D G3DSA:1.20.1250.20 8 190 1.4E-21 T 28-03-2018 RK98_RS08160 e5a09dccab1a721539e169caf1ad0398 389 Gene3D G3DSA:1.20.1250.20 193 384 7.4E-29 T 28-03-2018 RK98_RS08160 e5a09dccab1a721539e169caf1ad0398 389 SUPERFAMILY SSF103473 10 378 2.49E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS09510 ef1c1f83013fa05f728de972e8963ffb 457 SUPERFAMILY SSF52540 326 439 9.66E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09510 ef1c1f83013fa05f728de972e8963ffb 457 Gene3D G3DSA:3.10.590.10 142 288 3.8E-19 T 28-03-2018 RK98_RS09510 ef1c1f83013fa05f728de972e8963ffb 457 Gene3D G3DSA:3.10.590.10 4 141 1.4E-11 T 28-03-2018 RK98_RS09510 ef1c1f83013fa05f728de972e8963ffb 457 Pfam PF01878 EVE domain 164 270 9.1E-10 T 28-03-2018 IPR002740 EVE domain RK98_RS09510 ef1c1f83013fa05f728de972e8963ffb 457 SUPERFAMILY SSF88697 140 279 6.13E-24 T 28-03-2018 IPR015947 PUA-like domain RK98_RS09510 ef1c1f83013fa05f728de972e8963ffb 457 SUPERFAMILY SSF88697 6 133 6.25E-14 T 28-03-2018 IPR015947 PUA-like domain RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 Gene3D G3DSA:3.30.1360.10 1 85 6.3E-17 T 28-03-2018 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 Gene3D G3DSA:3.30.1360.10 108 224 4.5E-28 T 28-03-2018 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 SUPERFAMILY SSF47789 247 312 7.06E-23 T 28-03-2018 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 1.5E-23 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 152 2.5E-22 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 312 1.3E-117 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 SUPERFAMILY SSF55257 172 226 1.96E-31 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 SUPERFAMILY SSF55257 8 50 1.96E-31 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 314 2.0E-23 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 35.767 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 304 2.2E-28 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 Gene3D G3DSA:1.10.150.20 241 314 9.4E-26 T 28-03-2018 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 SMART SM00662 20 227 2.1E-98 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS09045 cb13299ff52d09f96ee1651d49b09ab8 314 SUPERFAMILY SSF56553 50 171 3.27E-38 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS00040 415599255c789252c5d08549308c29d8 1065 Pfam PF14579 Helix-hairpin-helix motif 740 828 2.3E-22 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS00040 415599255c789252c5d08549308c29d8 1065 Gene3D G3DSA:2.40.50.140 893 987 2.9E-9 T 28-03-2018 RK98_RS00040 415599255c789252c5d08549308c29d8 1065 SUPERFAMILY SSF89550 7 83 1.2E-7 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RK98_RS00040 415599255c789252c5d08549308c29d8 1065 Pfam PF01336 OB-fold nucleic acid binding domain 918 985 1.4E-7 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RK98_RS00040 415599255c789252c5d08549308c29d8 1065 SMART SM00481 3 70 4.0E-13 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal RK98_RS00040 415599255c789252c5d08549308c29d8 1065 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 263 667 8.7E-166 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS00040 415599255c789252c5d08549308c29d8 1065 Gene3D G3DSA:1.10.150.280 718 825 2.4E-7 T 28-03-2018 RK98_RS00040 415599255c789252c5d08549308c29d8 1065 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 151 946 3.8E-260 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS00040 415599255c789252c5d08549308c29d8 1065 Gene3D G3DSA:3.20.20.140 1 460 1.7E-23 T 28-03-2018 RK98_RS00040 415599255c789252c5d08549308c29d8 1065 Pfam PF02811 PHP domain 5 121 4.6E-22 T 28-03-2018 IPR004013 PHP domain GO:0003824 RK98_RS00875 9458b3c33b4336d4f0d24fba10b48081 370 Gene3D G3DSA:3.30.565.10 181 370 1.2E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS00875 9458b3c33b4336d4f0d24fba10b48081 370 SUPERFAMILY SSF55781 3 170 1.05E-16 T 28-03-2018 IPR029016 GAF domain-like RK98_RS00875 9458b3c33b4336d4f0d24fba10b48081 370 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 368 7.0E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS00875 9458b3c33b4336d4f0d24fba10b48081 370 Pfam PF13185 GAF domain 25 163 8.0E-14 T 28-03-2018 IPR003018 GAF domain GO:0005515 RK98_RS00875 9458b3c33b4336d4f0d24fba10b48081 370 Pfam PF07730 Histidine kinase 180 244 6.5E-17 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RK98_RS00875 9458b3c33b4336d4f0d24fba10b48081 370 SUPERFAMILY SSF55874 245 368 1.57E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS00875 9458b3c33b4336d4f0d24fba10b48081 370 Gene3D G3DSA:3.30.450.40 1 180 4.4E-17 T 28-03-2018 IPR029016 GAF domain-like RK98_RS05730 ee3b0e455154f55438fafa81783aa735 330 Gene3D G3DSA:3.40.50.1980 152 330 1.6E-28 T 28-03-2018 RK98_RS05730 ee3b0e455154f55438fafa81783aa735 330 SUPERFAMILY SSF53807 39 322 2.61E-57 T 28-03-2018 RK98_RS05730 ee3b0e455154f55438fafa81783aa735 330 Gene3D G3DSA:3.40.50.1980 24 151 2.5E-30 T 28-03-2018 RK98_RS05730 ee3b0e455154f55438fafa81783aa735 330 Pfam PF01497 Periplasmic binding protein 56 294 2.9E-25 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 SUPERFAMILY SSF47323 430 553 2.42E-34 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 Gene3D G3DSA:3.30.1360.70 3 104 1.4E-33 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 Pfam PF00750 tRNA synthetases class I (R) 105 407 4.4E-25 T 28-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 Gene3D G3DSA:3.40.50.620 105 362 7.9E-59 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 SMART SM01016 5 93 1.2E-34 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 Pfam PF05746 DALR anticodon binding domain 436 553 9.2E-36 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 Gene3D G3DSA:1.10.730.10 401 553 1.6E-45 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 141 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 Hamap MF_00123 Arginine--tRNA ligase [argS]. 10 553 26.841 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 SMART SM00836 435 553 5.0E-52 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 1.0E-24 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 PRINTS PR01038 Arginyl-tRNA synthetase signature 137 153 1.0E-24 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 PRINTS PR01038 Arginyl-tRNA synthetase signature 122 137 1.0E-24 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 PRINTS PR01038 Arginyl-tRNA synthetase signature 161 174 1.0E-24 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 10 93 8.7E-26 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 SUPERFAMILY SSF55190 2 113 4.05E-27 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 SUPERFAMILY SSF52374 117 446 2.04E-97 T 28-03-2018 RK98_RS02970 824255d2e55367e804111ca679fc88dc 553 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 553 2.3E-153 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 RK98_RS02840 c3a150262cf4979556fe069a7471b866 247 Pfam PF00005 ABC transporter 17 162 4.8E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02840 c3a150262cf4979556fe069a7471b866 247 SMART SM00382 27 211 6.5E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02840 c3a150262cf4979556fe069a7471b866 247 Gene3D G3DSA:3.40.50.300 1 246 5.0E-51 T 28-03-2018 RK98_RS02840 c3a150262cf4979556fe069a7471b866 247 SUPERFAMILY SSF52540 2 221 4.8E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02840 c3a150262cf4979556fe069a7471b866 247 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS05860 443a3faf5dd71320c3cf98563687a48b 310 Pfam PF01207 Dihydrouridine synthase (Dus) 1 297 6.4E-47 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RK98_RS05860 443a3faf5dd71320c3cf98563687a48b 310 Gene3D G3DSA:1.10.1200.80 232 309 2.4E-13 T 28-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 RK98_RS05860 443a3faf5dd71320c3cf98563687a48b 310 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 81 99 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 RK98_RS05860 443a3faf5dd71320c3cf98563687a48b 310 PIRSF PIRSF006621 1 309 4.1E-83 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 RK98_RS05860 443a3faf5dd71320c3cf98563687a48b 310 SUPERFAMILY SSF51395 1 301 3.16E-58 T 28-03-2018 RK98_RS05860 443a3faf5dd71320c3cf98563687a48b 310 Gene3D G3DSA:3.20.20.70 1 231 2.5E-31 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS14210 0a6fd270e3f39e517abc854807ce6132 448 PIRSF PIRSF006815 3 447 1.7E-181 T 28-03-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 RK98_RS14210 0a6fd270e3f39e517abc854807ce6132 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 49.131 T 28-03-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 RK98_RS14210 0a6fd270e3f39e517abc854807ce6132 448 SUPERFAMILY SSF53383 3 441 5.45E-110 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS14210 0a6fd270e3f39e517abc854807ce6132 448 Gene3D G3DSA:3.90.1150.10 338 447 1.7E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS14210 0a6fd270e3f39e517abc854807ce6132 448 Gene3D G3DSA:3.40.640.10 84 337 2.0E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS14210 0a6fd270e3f39e517abc854807ce6132 448 Pfam PF02347 Glycine cleavage system P-protein 3 440 5.4E-152 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 Pfam PF00367 phosphotransferase system, EIIB 431 462 3.0E-14 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 535 656 9.0E-54 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 SUPERFAMILY SSF55604 429 501 2.09E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 Gene3D G3DSA:3.30.1360.60 425 500 4.1E-26 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 597 609 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 Gene3D G3DSA:2.70.70.10 521 681 1.0E-60 T 28-03-2018 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 Pfam PF02378 Phosphotransferase system, EIIC 13 344 1.3E-98 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 404 486 7.1E-21 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 440 457 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 SUPERFAMILY SSF51261 533 676 5.41E-55 T 28-03-2018 IPR011055 Duplicated hybrid motif RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 536 655 2.3E-49 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS05350 093fb99ddb234605b5d7d6c32b436e4d 681 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 3 502 2.7E-241 T 28-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 RK98_RS04100 44905007de27ca090db64e7b25d3d613 234 SUPERFAMILY SSF50118 62 111 2.45E-12 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RK98_RS04100 44905007de27ca090db64e7b25d3d613 234 SUPERFAMILY SSF50118 167 231 2.45E-12 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RK98_RS04100 44905007de27ca090db64e7b25d3d613 234 Gene3D G3DSA:2.30.30.110 62 232 7.4E-25 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor RK98_RS04100 44905007de27ca090db64e7b25d3d613 234 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 64 229 9.9E-11 T 28-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 RK98_RS13290 592bb103d74f3cfa4e93ab6a781e9f22 61 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 59 4.6E-23 T 28-03-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 RK98_RS13290 592bb103d74f3cfa4e93ab6a781e9f22 61 Gene3D G3DSA:3.30.429.10 1 61 5.2E-18 T 28-03-2018 RK98_RS13290 592bb103d74f3cfa4e93ab6a781e9f22 61 Pfam PF01361 Tautomerase enzyme 2 60 1.7E-24 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 RK98_RS13290 592bb103d74f3cfa4e93ab6a781e9f22 61 SUPERFAMILY SSF55331 2 60 3.93E-18 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 30 655 7.1E-227 T 28-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 Gene3D G3DSA:1.10.150.20 11 57 0.0013 T 28-03-2018 RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 Pfam PF00270 DEAD/DEAH box helicase 267 422 9.7E-16 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 Pfam PF17191 RecG wedge domain 16 176 7.4E-20 T 28-03-2018 IPR033454 RecG, wedge domain RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 Gene3D G3DSA:3.40.50.300 247 447 8.3E-35 T 28-03-2018 RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 Gene3D G3DSA:3.40.50.300 448 620 7.9E-35 T 28-03-2018 RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 Gene3D G3DSA:2.40.50.140 58 142 6.1E-8 T 28-03-2018 RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 SMART SM00490 496 580 6.2E-21 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 SUPERFAMILY SSF52540 443 651 7.52E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 Pfam PF00271 Helicase conserved C-terminal domain 464 579 1.9E-19 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 SUPERFAMILY SSF50249 12 178 1.23E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 SUPERFAMILY SSF52540 181 443 1.19E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12530 9615a89b2ae20c01a3ddba5c5fe2e612 686 SMART SM00487 261 450 4.9E-31 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK98_RS03845 556532af73e26208286ffe50d0d9c89c 280 SUPERFAMILY SSF53850 25 274 5.85E-82 T 28-03-2018 RK98_RS03845 556532af73e26208286ffe50d0d9c89c 280 PIRSF PIRSF002854 1 265 2.5E-86 T 28-03-2018 IPR004872 Lipoprotein NlpA family RK98_RS03845 556532af73e26208286ffe50d0d9c89c 280 Gene3D G3DSA:3.40.190.10 22 114 5.9E-17 T 28-03-2018 RK98_RS03845 556532af73e26208286ffe50d0d9c89c 280 Gene3D G3DSA:3.40.190.10 115 213 1.7E-43 T 28-03-2018 RK98_RS03845 556532af73e26208286ffe50d0d9c89c 280 Pfam PF03180 NLPA lipoprotein 26 264 3.2E-86 T 28-03-2018 IPR004872 Lipoprotein NlpA family RK98_RS08605 c3a16b0c25b8800ea246a9d5db07346f 374 Pfam PF01494 FAD binding domain 2 330 1.3E-19 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 RK98_RS08605 c3a16b0c25b8800ea246a9d5db07346f 374 SUPERFAMILY SSF51905 256 357 2.25E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08605 c3a16b0c25b8800ea246a9d5db07346f 374 SUPERFAMILY SSF51905 1 161 2.25E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08605 c3a16b0c25b8800ea246a9d5db07346f 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 140 155 5.1E-19 T 28-03-2018 RK98_RS08605 c3a16b0c25b8800ea246a9d5db07346f 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 5.1E-19 T 28-03-2018 RK98_RS08605 c3a16b0c25b8800ea246a9d5db07346f 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 5.1E-19 T 28-03-2018 RK98_RS08605 c3a16b0c25b8800ea246a9d5db07346f 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 5.1E-19 T 28-03-2018 RK98_RS08605 c3a16b0c25b8800ea246a9d5db07346f 374 Gene3D G3DSA:3.50.50.60 1 336 1.2E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS03240 1bf264e9b10e9246d636647c718c219a 156 Gene3D G3DSA:3.40.140.10 1 156 2.4E-49 T 28-03-2018 RK98_RS03240 1bf264e9b10e9246d636647c718c219a 156 SUPERFAMILY SSF53927 2 152 3.85E-54 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 RK98_RS03240 1bf264e9b10e9246d636647c718c219a 156 Pfam PF14437 MafB19-like deaminase 4 149 7.8E-42 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 RK98_RS03240 1bf264e9b10e9246d636647c718c219a 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 RK98_RS03240 1bf264e9b10e9246d636647c718c219a 156 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 8 149 46.095 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 604 36.85 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 SUPERFAMILY SSF100934 477 579 5.23E-15 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 PRINTS PR00301 70kDa heat shock protein signature 53 61 3.0E-77 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.0E-77 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 PRINTS PR00301 70kDa heat shock protein signature 335 355 3.0E-77 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 PRINTS PR00301 70kDa heat shock protein signature 172 182 3.0E-77 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.0E-77 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 PRINTS PR00301 70kDa heat shock protein signature 439 455 3.0E-77 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 PRINTS PR00301 70kDa heat shock protein signature 304 320 3.0E-77 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 PRINTS PR00301 70kDa heat shock protein signature 112 132 3.0E-77 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 PRINTS PR00301 70kDa heat shock protein signature 358 377 3.0E-77 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 Gene3D G3DSA:3.30.420.40 1 171 2.1E-68 T 28-03-2018 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 SUPERFAMILY SSF53067 160 351 1.06E-66 T 28-03-2018 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 Gene3D G3DSA:1.20.1270.10 502 588 1.1E-23 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 Gene3D G3DSA:2.60.34.10 360 501 1.6E-64 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 Gene3D G3DSA:3.30.420.40 172 336 2.4E-49 T 28-03-2018 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 1.4E-282 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 Pfam PF00012 Hsp70 protein 76 573 3.4E-219 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 SUPERFAMILY SSF53067 1 157 6.64E-57 T 28-03-2018 RK98_RS14435 64e269c5732eeff5d44ccef30d3cdabb 610 SUPERFAMILY SSF100920 354 510 1.31E-58 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 Pfam PF07499 RuvA, C-terminal domain 156 197 1.3E-9 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 SUPERFAMILY SSF47781 65 132 4.45E-21 T 28-03-2018 IPR010994 RuvA domain 2-like RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 Pfam PF01330 RuvA N terminal domain 1 61 5.8E-19 T 28-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 199 29.319 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 Gene3D G3DSA:1.10.150.20 118 144 0.2 T 28-03-2018 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 2 196 9.1E-52 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 Pfam PF14520 Helix-hairpin-helix domain 71 128 1.7E-14 T 28-03-2018 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 Gene3D G3DSA:2.40.50.140 1 55 3.5E-20 T 28-03-2018 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 Gene3D G3DSA:1.10.8.10 145 198 1.9E-6 T 28-03-2018 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 SMART SM00278 107 126 0.39 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 SMART SM00278 72 91 0.38 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 Gene3D G3DSA:1.10.150.20 79 117 7.5E-15 T 28-03-2018 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 SUPERFAMILY SSF46929 152 198 2.49E-7 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 Gene3D G3DSA:1.10.150.280 56 78 0.23 T 28-03-2018 RK98_RS14755 0dccadd18c5c2ce9a52d2e9ca28f7043 200 SUPERFAMILY SSF50249 1 62 4.23E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS11555 2870768288d3d00ba735e5b5a6ce6f19 384 Gene3D G3DSA:3.40.640.10 44 270 7.1E-53 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS11555 2870768288d3d00ba735e5b5a6ce6f19 384 Gene3D G3DSA:3.90.1150.10 271 384 1.0E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS11555 2870768288d3d00ba735e5b5a6ce6f19 384 Pfam PF00155 Aminotransferase class I and II 29 376 7.6E-63 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RK98_RS11555 2870768288d3d00ba735e5b5a6ce6f19 384 SUPERFAMILY SSF53383 18 382 1.6E-110 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS11555 2870768288d3d00ba735e5b5a6ce6f19 384 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 229 242 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 SUPERFAMILY SSF50494 33 237 5.81E-35 T 28-03-2018 IPR009003 Peptidase S1, PA clan RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 ProSitePatterns PS00672 Serine proteases, V8 family, histidine active site. 61 75 - T 28-03-2018 IPR028301 Serine proteases, V8 family, histidine active site RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 PRINTS PR00839 V8 serine protease family signature 40 57 5.9E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 PRINTS PR00839 V8 serine protease family signature 148 161 5.9E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 PRINTS PR00839 V8 serine protease family signature 89 101 5.9E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 PRINTS PR00839 V8 serine protease family signature 199 211 5.9E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 PRINTS PR00839 V8 serine protease family signature 182 198 5.9E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 PRINTS PR00839 V8 serine protease family signature 60 77 5.9E-34 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 Gene3D G3DSA:2.40.10.10 47 134 5.4E-8 T 28-03-2018 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 PRINTS PR01774 Exfoliative toxin signature 184 208 1.2E-7 T 28-03-2018 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 PRINTS PR01774 Exfoliative toxin signature 67 91 1.2E-7 T 28-03-2018 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 Pfam PF00089 Trypsin 43 233 1.0E-24 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 RK98_RS00615 5688db6ff7a49e887216f639ce6ec791 239 Gene3D G3DSA:2.40.10.10 135 238 5.3E-18 T 28-03-2018 RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 Gene3D G3DSA:3.20.20.100 1 274 4.8E-93 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 PRINTS PR00069 Aldo-keto reductase signature 95 113 5.4E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 PRINTS PR00069 Aldo-keto reductase signature 35 59 5.4E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 PRINTS PR00069 Aldo-keto reductase signature 198 222 5.4E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 PRINTS PR00069 Aldo-keto reductase signature 127 144 5.4E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 PRINTS PR00069 Aldo-keto reductase signature 161 190 5.4E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 Pfam PF00248 Aldo/keto reductase family 15 263 2.0E-45 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 231 246 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 SUPERFAMILY SSF51430 4 270 1.7E-89 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 PIRSF PIRSF000097 1 274 3.4E-91 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS00490 4b9372d6a63a698b8387efda73b05498 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 127 144 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RK98_RS10490 be456ffa774b874a0acf44df6faf2b44 349 Pfam PF14657 Arm DNA-binding domain 11 54 2.1E-13 T 28-03-2018 IPR028259 AP2-like integrase, N-terminal domain RK98_RS10490 be456ffa774b874a0acf44df6faf2b44 349 Pfam PF00589 Phage integrase family 177 336 8.1E-20 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS10490 be456ffa774b874a0acf44df6faf2b44 349 Gene3D G3DSA:1.10.150.130 54 163 3.0E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS10490 be456ffa774b874a0acf44df6faf2b44 349 SUPERFAMILY SSF56349 59 343 1.0E-46 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS10490 be456ffa774b874a0acf44df6faf2b44 349 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 59 113 2.2E-11 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RK98_RS10490 be456ffa774b874a0acf44df6faf2b44 349 Gene3D G3DSA:1.10.443.10 164 349 5.3E-27 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS11815 4ed3a79302b759c2cf0dcfa59f190fda 179 Gene3D G3DSA:2.60.120.10 71 179 3.0E-15 T 28-03-2018 IPR014710 RmlC-like jelly roll fold RK98_RS11815 4ed3a79302b759c2cf0dcfa59f190fda 179 Pfam PF07883 Cupin domain 106 173 8.5E-10 T 28-03-2018 IPR013096 Cupin 2, conserved barrel RK98_RS11815 4ed3a79302b759c2cf0dcfa59f190fda 179 SUPERFAMILY SSF51182 54 176 6.99E-27 T 28-03-2018 IPR011051 RmlC-like cupin domain RK98_RS11815 4ed3a79302b759c2cf0dcfa59f190fda 179 Pfam PF01381 Helix-turn-helix 7 61 1.4E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS11815 4ed3a79302b759c2cf0dcfa59f190fda 179 SMART SM00530 6 61 9.8E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS11815 4ed3a79302b759c2cf0dcfa59f190fda 179 Gene3D G3DSA:1.10.260.40 1 70 1.9E-21 T 28-03-2018 RK98_RS11815 4ed3a79302b759c2cf0dcfa59f190fda 179 SUPERFAMILY SSF47413 1 67 6.48E-19 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 310 331 2.1E-8 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 169 187 2.1E-8 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 75 95 2.1E-8 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 48 69 2.1E-8 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 17 382 7.6E-101 T 28-03-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 TIGRFAM TIGR00532 HMG_CoA_R_NAD: hydroxymethylglutaryl-CoA reductase, degradative 4 381 5.7E-99 T 28-03-2018 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type GO:0015936|GO:0016616|GO:0050662 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 Gene3D G3DSA:3.90.770.10 2 122 6.7E-19 T 28-03-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 SUPERFAMILY SSF56542 225 424 6.67E-99 T 28-03-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 SUPERFAMILY SSF56542 6 117 6.67E-99 T 28-03-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 ProSitePatterns PS00066 Hydroxymethylglutaryl-coenzyme A reductases signature 1. 171 185 - T 28-03-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 SUPERFAMILY SSF55035 109 215 3.01E-30 T 28-03-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 Gene3D G3DSA:3.30.70.420 123 214 2.0E-29 T 28-03-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 Gene3D G3DSA:3.90.770.10 215 387 1.5E-31 T 28-03-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS07245 10196b05c235db0ab80ad1f6b91d1215 425 ProSitePatterns PS01192 Hydroxymethylglutaryl-coenzyme A reductases signature 3. 368 381 - T 28-03-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS02890 533801d195077534fa9f7f43c11aa167 114 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 108 2.0E-27 T 28-03-2018 RK98_RS06765 761e44e094c67ba4460f3e753995e7fb 151 SMART SM00347 26 126 5.9E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS06765 761e44e094c67ba4460f3e753995e7fb 151 Gene3D G3DSA:1.10.10.10 2 136 1.6E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06765 761e44e094c67ba4460f3e753995e7fb 151 SUPERFAMILY SSF46785 11 127 5.82E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06765 761e44e094c67ba4460f3e753995e7fb 151 Pfam PF12802 MarR family 31 89 1.2E-9 T 28-03-2018 RK98_RS07725 5fc080df9c5e926e8b9a5e4e6601c35d 151 PIRSF PIRSF006187 1 147 1.4E-50 T 28-03-2018 IPR009736 Protein of unknown function DUF1307 RK98_RS07725 5fc080df9c5e926e8b9a5e4e6601c35d 151 Pfam PF06998 Protein of unknown function (DUF1307) 25 143 2.6E-37 T 28-03-2018 IPR009736 Protein of unknown function DUF1307 RK98_RS07725 5fc080df9c5e926e8b9a5e4e6601c35d 151 SUPERFAMILY SSF160704 21 145 1.31E-38 T 28-03-2018 IPR009736 Protein of unknown function DUF1307 RK98_RS07725 5fc080df9c5e926e8b9a5e4e6601c35d 151 Gene3D G3DSA:3.30.1830.10 25 145 7.5E-34 T 28-03-2018 RK98_RS08725 6d2796292c5fc1b9b1867acba5793977 313 SUPERFAMILY SSF53590 2 310 1.26E-84 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RK98_RS08725 6d2796292c5fc1b9b1867acba5793977 313 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 303 1.5E-50 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RK98_RS08725 6d2796292c5fc1b9b1867acba5793977 313 Gene3D G3DSA:3.90.245.10 2 313 6.4E-65 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RK98_RS05430 d6fa9f974d9d184fa34a51d3c81361b6 253 Gene3D G3DSA:1.10.3720.10 8 250 9.3E-24 T 28-03-2018 RK98_RS05430 d6fa9f974d9d184fa34a51d3c81361b6 253 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 247 1.5E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS05430 d6fa9f974d9d184fa34a51d3c81361b6 253 SUPERFAMILY SSF161098 54 239 8.37E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 406 4.3E-167 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 Pfam PF07687 Peptidase dimerisation domain 207 307 2.7E-9 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 SUPERFAMILY SSF55031 209 319 2.2E-39 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 SUPERFAMILY SSF53187 322 406 2.31E-80 T 28-03-2018 RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 SUPERFAMILY SSF53187 3 210 2.31E-80 T 28-03-2018 RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 Hamap MF_00550 Peptidase T [pepT]. 2 404 55.504 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 Pfam PF01546 Peptidase family M20/M25/M40 139 402 6.0E-12 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 PIRSF PIRSF037215 1 408 4.4E-185 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 Gene3D G3DSA:3.40.630.10 1 408 2.3E-48 T 28-03-2018 RK98_RS02250 6383f7430fa72dee06b7bc76e8f3d5c7 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RK98_RS00700 42a91117474a68e7bc1803af59f263a0 131 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 24 128 9.0E-26 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS00700 42a91117474a68e7bc1803af59f263a0 131 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 45 68 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS00700 42a91117474a68e7bc1803af59f263a0 131 ProSitePatterns PS00277 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin signature 1. 2 11 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS00700 42a91117474a68e7bc1803af59f263a0 131 Gene3D G3DSA:3.10.20.120 1 122 1.1E-39 T 28-03-2018 RK98_RS00700 42a91117474a68e7bc1803af59f263a0 131 SUPERFAMILY SSF54334 16 129 1.44E-37 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS00700 42a91117474a68e7bc1803af59f263a0 131 PRINTS PR01898 Bacterial superantigen superfamily signature 111 127 1.8E-14 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00700 42a91117474a68e7bc1803af59f263a0 131 PRINTS PR01898 Bacterial superantigen superfamily signature 58 72 1.8E-14 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00700 42a91117474a68e7bc1803af59f263a0 131 PRINTS PR01898 Bacterial superantigen superfamily signature 45 58 1.8E-14 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 Gene3D G3DSA:2.70.70.10 1121 1261 2.8E-25 T 28-03-2018 RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 SUPERFAMILY SSF53955 1291 1393 3.94E-6 T 28-03-2018 IPR023346 Lysozyme-like domain RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 Pfam PF01464 Transglycosylase SLT domain 1291 1376 1.7E-5 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 Gene3D G3DSA:1.20.120.20 821 1057 9.9E-23 T 28-03-2018 RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 Gene3D G3DSA:1.20.120.20 651 820 2.1E-8 T 28-03-2018 RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 SUPERFAMILY SSF48371 579 878 3.87E-10 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 Gene3D G3DSA:1.10.287.700 570 650 1.8E-7 T 28-03-2018 RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 SUPERFAMILY SSF51261 1093 1242 7.85E-29 T 28-03-2018 IPR011055 Duplicated hybrid motif RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 Pfam PF01551 Peptidase family M23 1143 1238 1.9E-16 T 28-03-2018 IPR016047 Peptidase M23 RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 Pfam PF10145 Phage-related minor tail protein 234 395 5.6E-18 T 28-03-2018 IPR010090 Phage tail tape measure protein RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 Gene3D G3DSA:1.10.530.10 1263 1436 3.6E-9 T 28-03-2018 RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 173 502 3.6E-18 T 28-03-2018 IPR010090 Phage tail tape measure protein RK98_RS01635 4161920251118a6555c51cf9299f9c56 1509 Gene3D G3DSA:1.20.1170.10 11 384 9.7E-8 T 28-03-2018 RK98_RS07780 798eb3833fa067c0834e08f404a0de94 199 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 134 193 3.8E-18 T 28-03-2018 RK98_RS07780 798eb3833fa067c0834e08f404a0de94 199 SUPERFAMILY SSF159888 9 128 1.44E-19 T 28-03-2018 RK98_RS07780 798eb3833fa067c0834e08f404a0de94 199 PIRSF PIRSF021308 1 199 2.1E-97 T 28-03-2018 IPR016786 Uncharacterised protein YdeI, bacterial RK98_RS07780 798eb3833fa067c0834e08f404a0de94 199 Pfam PF08818 Domain of unknown function (DU1801) 20 118 6.5E-16 T 28-03-2018 IPR014922 Domain of unknown function DUF1801 RK98_RS08170 7010878e9cebcccd0c76849fc0e9615d 148 SUPERFAMILY SSF46785 7 119 3.62E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08170 7010878e9cebcccd0c76849fc0e9615d 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 5.1E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS08170 7010878e9cebcccd0c76849fc0e9615d 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 5.1E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS08170 7010878e9cebcccd0c76849fc0e9615d 148 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 5.1E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS08170 7010878e9cebcccd0c76849fc0e9615d 148 Pfam PF01047 MarR family 36 93 1.8E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS08170 7010878e9cebcccd0c76849fc0e9615d 148 Gene3D G3DSA:1.10.10.10 5 129 8.0E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08170 7010878e9cebcccd0c76849fc0e9615d 148 SMART SM00347 29 127 2.0E-19 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS08960 8df1d0c92c495f51a1f97fb2a0b0f340 87 Gene3D G3DSA:2.40.50.140 7 84 5.8E-30 T 28-03-2018 RK98_RS08960 8df1d0c92c495f51a1f97fb2a0b0f340 87 Pfam PF00366 Ribosomal protein S17 12 79 3.2E-31 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08960 8df1d0c92c495f51a1f97fb2a0b0f340 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 76 2.0E-33 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08960 8df1d0c92c495f51a1f97fb2a0b0f340 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 2.3E-11 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08960 8df1d0c92c495f51a1f97fb2a0b0f340 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 2.3E-11 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08960 8df1d0c92c495f51a1f97fb2a0b0f340 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 2.3E-11 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08960 8df1d0c92c495f51a1f97fb2a0b0f340 87 SUPERFAMILY SSF50249 7 83 9.42E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS08960 8df1d0c92c495f51a1f97fb2a0b0f340 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 6.6E-34 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08960 8df1d0c92c495f51a1f97fb2a0b0f340 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 23.88 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08960 8df1d0c92c495f51a1f97fb2a0b0f340 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 28-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS02590 dd9572401ce4efe5edd58a3d6ccce0ef 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 2 148 31.082 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 RK98_RS02590 dd9572401ce4efe5edd58a3d6ccce0ef 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 146 2.4E-40 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 RK98_RS02930 feab028f2ed8cd826eda684580a7a3f3 262 PRINTS PR00412 Epoxide hydrolase signature 235 257 2.3E-5 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 RK98_RS02930 feab028f2ed8cd826eda684580a7a3f3 262 PRINTS PR00412 Epoxide hydrolase signature 89 102 2.3E-5 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 RK98_RS02930 feab028f2ed8cd826eda684580a7a3f3 262 PRINTS PR00412 Epoxide hydrolase signature 46 61 2.3E-5 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 RK98_RS02930 feab028f2ed8cd826eda684580a7a3f3 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 2.3E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS02930 feab028f2ed8cd826eda684580a7a3f3 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 2.3E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS02930 feab028f2ed8cd826eda684580a7a3f3 262 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 2.3E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS02930 feab028f2ed8cd826eda684580a7a3f3 262 Gene3D G3DSA:3.40.50.1820 1 262 5.1E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS02930 feab028f2ed8cd826eda684580a7a3f3 262 SUPERFAMILY SSF53474 3 259 2.03E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS02930 feab028f2ed8cd826eda684580a7a3f3 262 Pfam PF00561 alpha/beta hydrolase fold 22 247 3.6E-26 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS12675 888d690a64f391e3bb7e292cd5537ca1 257 Pfam PF06018 CodY GAF-like domain 2 178 2.9E-69 T 28-03-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 RK98_RS12675 888d690a64f391e3bb7e292cd5537ca1 257 PIRSF PIRSF011572 1 257 6.1E-115 T 28-03-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 RK98_RS12675 888d690a64f391e3bb7e292cd5537ca1 257 Pfam PF08222 CodY helix-turn-helix domain 197 256 2.6E-34 T 28-03-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal RK98_RS12675 888d690a64f391e3bb7e292cd5537ca1 257 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 257 132.998 T 28-03-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 RK98_RS12675 888d690a64f391e3bb7e292cd5537ca1 257 Gene3D G3DSA:1.10.10.10 160 257 2.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS12675 888d690a64f391e3bb7e292cd5537ca1 257 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 4.5E-106 T 28-03-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 RK98_RS12675 888d690a64f391e3bb7e292cd5537ca1 257 SUPERFAMILY SSF46785 167 256 7.36E-41 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS12675 888d690a64f391e3bb7e292cd5537ca1 257 Gene3D G3DSA:3.30.450.40 1 159 2.2E-23 T 28-03-2018 IPR029016 GAF domain-like RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 Gene3D G3DSA:2.40.50.110 58 132 2.2E-27 T 28-03-2018 RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 PRINTS PR01898 Bacterial superantigen superfamily signature 128 141 8.7E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 PRINTS PR01898 Bacterial superantigen superfamily signature 235 251 8.7E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 PRINTS PR01898 Bacterial superantigen superfamily signature 169 182 8.7E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 PRINTS PR01898 Bacterial superantigen superfamily signature 94 120 8.7E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 PRINTS PR01898 Bacterial superantigen superfamily signature 182 196 8.7E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 ProSitePatterns PS00277 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin signature 1. 132 141 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 PRINTS PR00279 Bacterial toxin signature 130 142 4.8E-9 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 PRINTS PR00279 Bacterial toxin signature 169 185 4.8E-9 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 147 252 3.2E-25 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 Gene3D G3DSA:3.10.20.120 133 252 3.8E-39 T 28-03-2018 RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 SUPERFAMILY SSF50203 25 143 5.86E-34 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 Pfam PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain 91 137 5.4E-7 T 28-03-2018 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold GO:0009405 RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 SUPERFAMILY SSF54334 140 252 4.58E-35 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS00720 7ddd4cac056dcba64989d3f04bb855e4 254 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 169 192 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.8E-41 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.8E-41 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.8E-41 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.8E-41 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.8E-41 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.8E-41 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 Pfam PF00318 Ribosomal protein S2 9 224 3.3E-100 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.388 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 SUPERFAMILY SSF52313 6 231 3.01E-99 T 28-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 2.9E-110 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12685 c5898e1678dcaefa3384e84f20d4a3d9 255 Gene3D G3DSA:3.40.50.10490 5 255 2.4E-106 T 28-03-2018 RK98_RS05795 60ac44e69726ed1cc69ea16f14e788e1 392 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 375 1.5E-105 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 RK98_RS05795 60ac44e69726ed1cc69ea16f14e788e1 392 PIRSF PIRSF005962 1 392 3.1E-116 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 RK98_RS05795 60ac44e69726ed1cc69ea16f14e788e1 392 Gene3D G3DSA:3.40.630.10 267 392 1.5E-17 T 28-03-2018 RK98_RS05795 60ac44e69726ed1cc69ea16f14e788e1 392 Pfam PF07687 Peptidase dimerisation domain 183 277 1.7E-8 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS05795 60ac44e69726ed1cc69ea16f14e788e1 392 SUPERFAMILY SSF53187 3 199 6.29E-85 T 28-03-2018 RK98_RS05795 60ac44e69726ed1cc69ea16f14e788e1 392 SUPERFAMILY SSF53187 300 390 6.29E-85 T 28-03-2018 RK98_RS05795 60ac44e69726ed1cc69ea16f14e788e1 392 SUPERFAMILY SSF55031 186 298 1.06E-26 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS05795 60ac44e69726ed1cc69ea16f14e788e1 392 Pfam PF01546 Peptidase family M20/M25/M40 74 380 9.5E-32 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RK98_RS05795 60ac44e69726ed1cc69ea16f14e788e1 392 Gene3D G3DSA:3.40.630.10 1 266 3.8E-63 T 28-03-2018 RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 Gene3D G3DSA:3.40.50.300 472 793 4.6E-38 T 28-03-2018 RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 SUPERFAMILY SSF143517 1009 1159 5.23E-31 T 28-03-2018 RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 Gene3D G3DSA:3.40.50.300 804 971 9.4E-24 T 28-03-2018 RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 SUPERFAMILY SSF52540 23 366 1.22E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 SUPERFAMILY SSF52540 373 481 9.74E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 SUPERFAMILY SSF141259 486 563 1.09E-24 T 28-03-2018 IPR003711 CarD-like/TRCF domain RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 SMART SM00487 615 805 1.6E-34 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 155 1094 0.0 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 Pfam PF00270 DEAD/DEAH box helicase 620 779 8.2E-18 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 SUPERFAMILY SSF52540 797 1003 3.86E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 37 1154 29.13 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 Pfam PF03461 TRCF domain 1021 1113 4.9E-23 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 Pfam PF02559 CarD-like/TRCF domain 495 590 5.2E-32 T 28-03-2018 IPR003711 CarD-like/TRCF domain RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 SMART SM00982 1020 1120 9.7E-34 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 Gene3D G3DSA:3.40.50.300 385 471 0.2 T 28-03-2018 RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 SMART SM00490 838 925 4.0E-19 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 SUPERFAMILY SSF52540 539 798 4.49E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 SMART SM01058 494 591 1.1E-47 T 28-03-2018 IPR003711 CarD-like/TRCF domain RK98_RS03600 8bfd97e4a80904a034206ef7f3aab8a1 1168 Pfam PF00271 Helicase conserved C-terminal domain 817 924 2.5E-16 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 Gene3D G3DSA:3.40.50.1440 9 214 2.0E-47 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 SMART SM00864 13 205 7.3E-116 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 SUPERFAMILY SSF55307 207 318 2.29E-44 T 28-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 Pfam PF12327 FtsZ family, C-terminal domain 222 316 5.7E-34 T 28-03-2018 IPR024757 Cell division protein FtsZ, C-terminal RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 325 1.2E-136 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 SMART SM00865 207 324 6.0E-57 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 386 38.835 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 Gene3D G3DSA:3.30.1330.20 215 322 2.5E-47 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.2E-50 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.2E-50 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.2E-50 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.2E-50 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 SUPERFAMILY SSF52490 13 208 2.75E-71 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RK98_RS12320 2bffc940f3ecc46de1fcbd6e25e3808f 390 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 4.3E-45 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 RK98_RS06965 ac0e69fe667b25d8c46cc13d57bdee03 283 Gene3D G3DSA:3.30.1300.10 176 283 1.5E-25 T 28-03-2018 RK98_RS06965 ac0e69fe667b25d8c46cc13d57bdee03 283 Hamap MF_00158 Pantothenate synthetase [panC]. 3 280 38.211 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 RK98_RS06965 ac0e69fe667b25d8c46cc13d57bdee03 283 SUPERFAMILY SSF52374 3 280 2.25E-101 T 28-03-2018 RK98_RS06965 ac0e69fe667b25d8c46cc13d57bdee03 283 Gene3D G3DSA:3.40.50.620 1 175 1.0E-75 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS06965 ac0e69fe667b25d8c46cc13d57bdee03 283 Pfam PF02569 Pantoate-beta-alanine ligase 4 279 4.8E-98 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 RK98_RS06965 ac0e69fe667b25d8c46cc13d57bdee03 283 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 280 1.1E-103 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 Gene3D G3DSA:3.90.190.20 337 489 3.0E-36 T 28-03-2018 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 SUPERFAMILY SSF53244 332 467 9.16E-32 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 Gene3D G3DSA:3.40.1190.10 99 336 2.7E-55 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 Gene3D G3DSA:3.40.1390.10 1 98 1.2E-21 T 28-03-2018 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 SUPERFAMILY SSF63418 8 99 3.4E-19 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 10 484 30.464 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 414 1.0E-17 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 Pfam PF01225 Mur ligase family, catalytic domain 23 82 2.3E-6 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 475 8.5E-130 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 Pfam PF08245 Mur ligase middle domain 108 311 8.7E-53 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS11375 b0d8b2610be732a2e960b46236dabdb9 494 SUPERFAMILY SSF53623 99 331 1.26E-67 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 4.8E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 SMART SM00421 145 202 2.1E-25 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 Gene3D G3DSA:1.10.10.10 128 209 1.3E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 4.2E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 4.2E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 4.2E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 Gene3D G3DSA:3.40.50.2300 2 127 3.2E-33 T 28-03-2018 RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 SMART SM00448 3 116 8.1E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 SUPERFAMILY SSF46894 132 208 9.52E-24 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RK98_RS01210 3ef66c1a3102caadb5bc2aca10b12b8f 209 SUPERFAMILY SSF52172 2 130 4.84E-33 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS07020 7915cd1a612b0f45f125a5cf0a6720cd 288 Pfam PF03881 Fructosamine kinase 13 284 4.9E-75 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 RK98_RS07020 7915cd1a612b0f45f125a5cf0a6720cd 288 PIRSF PIRSF006221 1 287 1.8E-94 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 RK98_RS07020 7915cd1a612b0f45f125a5cf0a6720cd 288 SUPERFAMILY SSF56112 5 284 3.79E-47 T 28-03-2018 IPR011009 Protein kinase-like domain RK98_RS07020 7915cd1a612b0f45f125a5cf0a6720cd 288 Gene3D G3DSA:3.90.1200.10 92 270 8.8E-19 T 28-03-2018 RK98_RS07020 7915cd1a612b0f45f125a5cf0a6720cd 288 Gene3D G3DSA:3.30.200.20 2 86 1.2E-17 T 28-03-2018 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 Gene3D G3DSA:3.20.20.70 1 295 4.3E-81 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 SUPERFAMILY SSF51569 1 288 7.33E-83 T 28-03-2018 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 PIRSF PIRSF001365 1 295 1.2E-82 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 4.1E-30 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 4.1E-30 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 4.1E-30 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 4.1E-30 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 SMART SM01130 4 290 6.1E-106 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 Pfam PF00701 Dihydrodipicolinate synthetase family 5 282 5.3E-73 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 4 288 54.907 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13460 99203970b6b95112f2d1d93464060f50 295 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 285 5.7E-83 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS08970 135753fe31e427b1c0545cbfa229c1e5 105 Pfam PF00467 KOW motif 5 36 1.6E-8 T 28-03-2018 IPR005824 KOW RK98_RS08970 135753fe31e427b1c0545cbfa229c1e5 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 28-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08970 135753fe31e427b1c0545cbfa229c1e5 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 9.9E-41 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08970 135753fe31e427b1c0545cbfa229c1e5 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 8.2E-31 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08970 135753fe31e427b1c0545cbfa229c1e5 105 Gene3D G3DSA:2.30.30.30 1 91 5.8E-39 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 RK98_RS08970 135753fe31e427b1c0545cbfa229c1e5 105 SUPERFAMILY SSF50104 1 99 2.6E-39 T 28-03-2018 IPR008991 Translation protein SH3-like domain RK98_RS08970 135753fe31e427b1c0545cbfa229c1e5 105 SMART SM00739 2 29 2.0E-6 T 28-03-2018 IPR005824 KOW RK98_RS08970 135753fe31e427b1c0545cbfa229c1e5 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 22.992 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08710 bc840d0db1b6d984b4c38b78749c0f4b 296 PIRSF PIRSF016502 1 296 2.2E-88 T 28-03-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 RK98_RS08710 bc840d0db1b6d984b4c38b78749c0f4b 296 TIGRFAM TIGR03441 urea_trans_yut: urea transporter 1 286 5.3E-118 T 28-03-2018 IPR017807 Urea transporter, bacteria GO:0015204|GO:0016021|GO:0071918 RK98_RS08710 bc840d0db1b6d984b4c38b78749c0f4b 296 Pfam PF03253 Urea transporter 2 287 6.1E-83 T 28-03-2018 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: R-HSA-425366 RK98_RS08710 bc840d0db1b6d984b4c38b78749c0f4b 296 Gene3D G3DSA:1.10.3430.10 1 295 7.4E-81 T 28-03-2018 RK98_RS02865 eaf0e1840b88f55b90a717df21c675dd 680 Pfam PF00999 Sodium/hydrogen exchanger family 7 426 2.1E-51 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RK98_RS13625 e671081b8ea759d331802e96d272f34c 159 PRINTS PR00070 Dihydrofolate reductase signature 89 103 7.1E-12 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RK98_RS13625 e671081b8ea759d331802e96d272f34c 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 7.1E-12 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RK98_RS13625 e671081b8ea759d331802e96d272f34c 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 7.1E-12 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RK98_RS13625 e671081b8ea759d331802e96d272f34c 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 7.1E-12 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RK98_RS13625 e671081b8ea759d331802e96d272f34c 159 Pfam PF00186 Dihydrofolate reductase 3 157 1.2E-54 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RK98_RS13625 e671081b8ea759d331802e96d272f34c 159 SUPERFAMILY SSF53597 2 158 1.03E-49 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RK98_RS13625 e671081b8ea759d331802e96d272f34c 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 28-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 RK98_RS13625 e671081b8ea759d331802e96d272f34c 159 Gene3D G3DSA:3.40.430.10 1 159 4.6E-46 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 RK98_RS13625 e671081b8ea759d331802e96d272f34c 159 PIRSF PIRSF000194 1 159 1.7E-49 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 RK98_RS12025 3b926d2f180497abc96a95475ae309d6 352 SUPERFAMILY SSF46589 15 102 5.75E-22 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 RK98_RS12025 3b926d2f180497abc96a95475ae309d6 352 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 23 90 2.6E-24 T 28-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RK98_RS12025 3b926d2f180497abc96a95475ae309d6 352 Gene3D G3DSA:3.30.930.10 10 347 7.4E-96 T 28-03-2018 RK98_RS12025 3b926d2f180497abc96a95475ae309d6 352 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 43 344 3.5E-113 T 28-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RK98_RS12025 3b926d2f180497abc96a95475ae309d6 352 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 11 343 48.313 T 28-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 RK98_RS12025 3b926d2f180497abc96a95475ae309d6 352 SUPERFAMILY SSF55681 95 344 3.39E-80 T 28-03-2018 RK98_RS12025 3b926d2f180497abc96a95475ae309d6 352 Pfam PF01409 tRNA synthetases class II core domain (F) 95 343 2.1E-108 T 28-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 RK98_RS06150 8eddf10a3fc83f508cf5c53d3ddd7b76 256 SUPERFAMILY SSF81301 6 126 1.09E-21 T 28-03-2018 RK98_RS06150 8eddf10a3fc83f508cf5c53d3ddd7b76 256 SUPERFAMILY SSF81593 129 256 8.63E-70 T 28-03-2018 RK98_RS06150 8eddf10a3fc83f508cf5c53d3ddd7b76 256 Pfam PF07827 KNTase C-terminal domain 117 246 2.0E-35 T 28-03-2018 IPR012481 Kanamycin nucleotidyltransferase, C-terminal GO:0016779|GO:0046677 RK98_RS06150 8eddf10a3fc83f508cf5c53d3ddd7b76 256 Gene3D G3DSA:3.30.460.10 5 128 1.0E-20 T 28-03-2018 RK98_RS06150 8eddf10a3fc83f508cf5c53d3ddd7b76 256 Gene3D G3DSA:1.20.120.330 132 254 4.0E-46 T 28-03-2018 RK98_RS11000 cb4945c0f73b9bffd940153e4536ff6e 402 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 326 1.6E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11000 cb4945c0f73b9bffd940153e4536ff6e 402 Gene3D G3DSA:3.50.50.60 4 129 1.6E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11000 cb4945c0f73b9bffd940153e4536ff6e 402 SUPERFAMILY SSF51905 6 210 1.94E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11000 cb4945c0f73b9bffd940153e4536ff6e 402 Gene3D G3DSA:3.50.50.60 130 335 4.7E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11000 cb4945c0f73b9bffd940153e4536ff6e 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 1.4E-6 T 28-03-2018 RK98_RS11000 cb4945c0f73b9bffd940153e4536ff6e 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.4E-6 T 28-03-2018 RK98_RS11000 cb4945c0f73b9bffd940153e4536ff6e 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.4E-6 T 28-03-2018 RK98_RS11000 cb4945c0f73b9bffd940153e4536ff6e 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 1.4E-6 T 28-03-2018 RK98_RS11000 cb4945c0f73b9bffd940153e4536ff6e 402 SUPERFAMILY SSF51905 152 339 4.6E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS07995 0101d19116447152c921924dc95bf352 288 Pfam PF01545 Cation efflux family 15 206 1.9E-45 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RK98_RS07995 0101d19116447152c921924dc95bf352 288 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 286 6.4E-63 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RK98_RS07995 0101d19116447152c921924dc95bf352 288 Gene3D G3DSA:1.20.1510.10 9 205 2.3E-35 T 28-03-2018 RK98_RS07995 0101d19116447152c921924dc95bf352 288 Pfam PF16916 Dimerisation domain of Zinc Transporter 212 285 4.0E-18 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain RK98_RS07995 0101d19116447152c921924dc95bf352 288 Gene3D G3DSA:3.30.70.1350 206 287 3.6E-17 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain RK98_RS07995 0101d19116447152c921924dc95bf352 288 SUPERFAMILY SSF161111 7 208 1.96E-48 T 28-03-2018 RK98_RS07995 0101d19116447152c921924dc95bf352 288 SUPERFAMILY SSF160240 210 285 5.89E-18 T 28-03-2018 RK98_RS12330 121f486f209178543c5441cdc38db11d 222 Pfam PF01168 Alanine racemase, N-terminal domain 23 220 1.2E-20 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS12330 121f486f209178543c5441cdc38db11d 222 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 220 9.0E-47 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein RK98_RS12330 121f486f209178543c5441cdc38db11d 222 SUPERFAMILY SSF51419 2 219 6.54E-69 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS12330 121f486f209178543c5441cdc38db11d 222 Gene3D G3DSA:3.20.20.10 1 222 3.7E-48 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS12330 121f486f209178543c5441cdc38db11d 222 PIRSF PIRSF004848 1 222 1.6E-60 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein RK98_RS02380 88683dae9dea7598b4a0babbea1bb38b 504 Gene3D G3DSA:1.10.3720.10 1 208 1.2E-30 T 28-03-2018 RK98_RS02380 88683dae9dea7598b4a0babbea1bb38b 504 Gene3D G3DSA:3.40.190.10 385 502 1.7E-22 T 28-03-2018 RK98_RS02380 88683dae9dea7598b4a0babbea1bb38b 504 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 234 499 3.8E-62 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RK98_RS02380 88683dae9dea7598b4a0babbea1bb38b 504 Gene3D G3DSA:3.40.190.10 227 384 4.7E-34 T 28-03-2018 RK98_RS02380 88683dae9dea7598b4a0babbea1bb38b 504 SUPERFAMILY SSF161098 13 199 8.11E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS02380 88683dae9dea7598b4a0babbea1bb38b 504 SUPERFAMILY SSF53850 234 503 1.63E-71 T 28-03-2018 RK98_RS02380 88683dae9dea7598b4a0babbea1bb38b 504 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 209 1.0E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS08735 c07fb03011dca786f2c88eefc210e086 256 Pfam PF13673 Acetyltransferase (GNAT) domain 147 241 3.4E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS08735 c07fb03011dca786f2c88eefc210e086 256 Gene3D G3DSA:3.40.630.30 116 250 6.4E-14 T 28-03-2018 RK98_RS08735 c07fb03011dca786f2c88eefc210e086 256 SUPERFAMILY SSF55729 115 243 1.13E-17 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 SUPERFAMILY SSF52821 14 101 2.23E-23 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 Pfam PF01206 Sulfurtransferase TusA 119 187 5.1E-17 T 28-03-2018 IPR001455 TusA-like domain RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 SUPERFAMILY SSF64307 96 187 3.14E-20 T 28-03-2018 IPR001455 TusA-like domain RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 Pfam PF00581 Rhodanese-like domain 15 98 8.4E-12 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 SUPERFAMILY SSF75169 202 246 1.88E-20 T 28-03-2018 IPR027396 DsrEFH-like RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 SUPERFAMILY SSF75169 296 348 1.88E-20 T 28-03-2018 IPR027396 DsrEFH-like RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 Gene3D G3DSA:3.40.1260.10 193 354 4.1E-51 T 28-03-2018 RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 SMART SM00450 9 102 1.4E-16 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 Pfam PF13686 DsrE/DsrF/DrsH-like family 202 353 2.1E-55 T 28-03-2018 IPR032836 DsrE2-like family RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 Gene3D G3DSA:3.40.250.10 2 98 5.9E-21 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06085 0a97ab778ce0fb110cbe94f028224500 354 Gene3D G3DSA:3.30.110.40 99 188 5.3E-24 T 28-03-2018 IPR001455 TusA-like domain RK98_RS10330 41c54ef5189c21a574ac67a62168d11c 66 SUPERFAMILY SSF50249 1 65 3.72E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS10330 41c54ef5189c21a574ac67a62168d11c 66 Gene3D G3DSA:2.40.50.140 1 66 2.7E-27 T 28-03-2018 RK98_RS10330 41c54ef5189c21a574ac67a62168d11c 66 PRINTS PR00050 Cold shock protein signature 39 57 1.4E-20 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS10330 41c54ef5189c21a574ac67a62168d11c 66 PRINTS PR00050 Cold shock protein signature 4 19 1.4E-20 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS10330 41c54ef5189c21a574ac67a62168d11c 66 PRINTS PR00050 Cold shock protein signature 24 33 1.4E-20 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS10330 41c54ef5189c21a574ac67a62168d11c 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 8.6E-32 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS10330 41c54ef5189c21a574ac67a62168d11c 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 28-03-2018 IPR019844 Cold-shock conserved site RK98_RS10330 41c54ef5189c21a574ac67a62168d11c 66 PIRSF PIRSF002599 1 66 1.3E-24 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 RK98_RS10330 41c54ef5189c21a574ac67a62168d11c 66 SMART SM00357 3 66 1.4E-29 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 RK98_RS05000 85d01c6d52cd30805ef4ff516c9f4d43 238 SUPERFAMILY SSF53448 3 231 1.27E-49 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS05000 85d01c6d52cd30805ef4ff516c9f4d43 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 28-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RK98_RS05000 85d01c6d52cd30805ef4ff516c9f4d43 238 Gene3D G3DSA:3.90.550.10 2 236 1.5E-41 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS05000 85d01c6d52cd30805ef4ff516c9f4d43 238 Hamap MF_02068 Ribitol-5-phosphate cytidylyltransferase [tarI]. 1 234 45.869 T 28-03-2018 IPR034709 Ribitol-5-phosphate cytidylyltransferase GO:0047349 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RK98_RS05000 85d01c6d52cd30805ef4ff516c9f4d43 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 232 1.5E-42 T 28-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RK98_RS05585 bc3d2c7905d98467e93da1ee79e92eec 257 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS05585 bc3d2c7905d98467e93da1ee79e92eec 257 SUPERFAMILY SSF52540 4 239 5.8E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05585 bc3d2c7905d98467e93da1ee79e92eec 257 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 245 2.6E-112 T 28-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 RK98_RS05585 bc3d2c7905d98467e93da1ee79e92eec 257 Pfam PF00005 ABC transporter 20 176 2.3E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS05585 bc3d2c7905d98467e93da1ee79e92eec 257 Gene3D G3DSA:3.40.50.300 1 253 1.7E-60 T 28-03-2018 RK98_RS05585 bc3d2c7905d98467e93da1ee79e92eec 257 SMART SM00382 29 225 1.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS12495 82da8413efe05297c8b70c25af646426 664 Pfam PF03793 PASTA domain 379 440 3.8E-13 T 28-03-2018 IPR005543 PASTA domain RK98_RS12495 82da8413efe05297c8b70c25af646426 664 Pfam PF03793 PASTA domain 514 575 2.5E-16 T 28-03-2018 IPR005543 PASTA domain RK98_RS12495 82da8413efe05297c8b70c25af646426 664 Pfam PF03793 PASTA domain 445 506 2.7E-13 T 28-03-2018 IPR005543 PASTA domain RK98_RS12495 82da8413efe05297c8b70c25af646426 664 PIRSF PIRSF000654 29 282 2.8E-31 T 28-03-2018 RK98_RS12495 82da8413efe05297c8b70c25af646426 664 PIRSF PIRSF000654 524 615 210.0 T 28-03-2018 RK98_RS12495 82da8413efe05297c8b70c25af646426 664 Pfam PF00069 Protein kinase domain 10 260 9.4E-58 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RK98_RS12495 82da8413efe05297c8b70c25af646426 664 SUPERFAMILY SSF56112 6 304 1.29E-79 T 28-03-2018 IPR011009 Protein kinase-like domain RK98_RS12495 82da8413efe05297c8b70c25af646426 664 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 39 - T 28-03-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 RK98_RS12495 82da8413efe05297c8b70c25af646426 664 SMART SM00220 10 268 9.8E-70 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RK98_RS12495 82da8413efe05297c8b70c25af646426 664 Gene3D G3DSA:1.10.510.10 79 421 4.8E-56 T 28-03-2018 RK98_RS12495 82da8413efe05297c8b70c25af646426 664 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 28-03-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 RK98_RS12495 82da8413efe05297c8b70c25af646426 664 SMART SM00740 441 509 9.7E-18 T 28-03-2018 IPR005543 PASTA domain RK98_RS12495 82da8413efe05297c8b70c25af646426 664 SMART SM00740 510 575 7.2E-20 T 28-03-2018 IPR005543 PASTA domain RK98_RS12495 82da8413efe05297c8b70c25af646426 664 SMART SM00740 373 440 2.7E-18 T 28-03-2018 IPR005543 PASTA domain RK98_RS12495 82da8413efe05297c8b70c25af646426 664 Gene3D G3DSA:3.30.200.20 2 78 3.6E-22 T 28-03-2018 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 133 356 1.7E-38 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 Pfam PF03979 Sigma-70 factor, region 1.1 24 80 6.6E-16 T 28-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 328 354 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 Pfam PF00140 Sigma-70 factor, region 1.2 97 129 1.6E-18 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 SUPERFAMILY SSF88659 208 281 7.07E-22 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 Pfam PF04542 Sigma-70 region 2 135 204 5.9E-22 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 131 367 4.6E-124 T 28-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 PRINTS PR00046 Major sigma-70 factor signature 307 319 2.9E-32 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 PRINTS PR00046 Major sigma-70 factor signature 343 354 2.9E-32 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 PRINTS PR00046 Major sigma-70 factor signature 328 343 2.9E-32 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 PRINTS PR00046 Major sigma-70 factor signature 159 172 2.9E-32 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 PRINTS PR00046 Major sigma-70 factor signature 183 191 2.9E-32 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 SUPERFAMILY SSF88659 265 366 4.49E-30 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 Pfam PF04545 Sigma-70, region 4 303 356 5.0E-20 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 Gene3D G3DSA:1.10.601.10 2 78 0.0048 T 28-03-2018 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 Gene3D G3DSA:1.10.601.10 79 204 2.3E-74 T 28-03-2018 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 13 368 34.023 T 28-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 159 172 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 SUPERFAMILY SSF88946 96 205 1.57E-53 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 Gene3D G3DSA:1.10.10.10 205 255 1.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 Pfam PF04539 Sigma-70 region 3 214 290 1.3E-30 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS14340 fd9316b3d9c683e2f404d6c0b6d07fc0 368 Gene3D G3DSA:1.10.10.10 297 368 4.4E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07800 2c052a88dc2e09376c36b76813b62515 211 SUPERFAMILY SSF161098 10 193 1.83E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS07800 2c052a88dc2e09376c36b76813b62515 211 Gene3D G3DSA:1.10.3720.10 3 207 2.9E-27 T 28-03-2018 RK98_RS07800 2c052a88dc2e09376c36b76813b62515 211 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 201 2.7E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS12800 e2d37d12fbfd5186a893394dd76a4038 746 SUPERFAMILY SSF52540 360 653 1.86E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12800 e2d37d12fbfd5186a893394dd76a4038 746 Pfam PF01580 FtsK/SpoIIIE family 398 581 6.6E-59 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RK98_RS12800 e2d37d12fbfd5186a893394dd76a4038 746 SUPERFAMILY SSF46785 678 743 6.53E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS12800 e2d37d12fbfd5186a893394dd76a4038 746 SMART SM00382 420 602 2.5E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS12800 e2d37d12fbfd5186a893394dd76a4038 746 SMART SM00843 677 742 4.1E-35 T 28-03-2018 IPR018541 FtsK gamma domain RK98_RS12800 e2d37d12fbfd5186a893394dd76a4038 746 Pfam PF09397 Ftsk gamma domain 679 739 1.4E-28 T 28-03-2018 IPR018541 FtsK gamma domain RK98_RS12800 e2d37d12fbfd5186a893394dd76a4038 746 Gene3D G3DSA:3.40.50.300 157 719 4.2E-50 T 28-03-2018 RK98_RS10395 5fa9d707508593aaa8763745cf1f0faa 179 Gene3D G3DSA:3.40.109.10 1 179 1.4E-26 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RK98_RS10395 5fa9d707508593aaa8763745cf1f0faa 179 SUPERFAMILY SSF55469 1 175 1.31E-32 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RK98_RS10395 5fa9d707508593aaa8763745cf1f0faa 179 Pfam PF00881 Nitroreductase family 7 156 9.7E-22 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 RK98_RS13330 beedb47c2eceefb3f735b33f5a51690b 210 Gene3D G3DSA:3.20.20.70 1 207 9.5E-54 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS13330 beedb47c2eceefb3f735b33f5a51690b 210 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 201 5.6E-38 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 RK98_RS13330 beedb47c2eceefb3f735b33f5a51690b 210 SUPERFAMILY SSF51366 1 204 5.18E-48 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RK98_RS13330 beedb47c2eceefb3f735b33f5a51690b 210 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 206 34.09 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 559 581 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 Pfam PF08343 Ribonucleotide reductase N-terminal 11 90 5.0E-20 T 28-03-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 Gene3D G3DSA:3.20.70.20 72 692 1.7E-148 T 28-03-2018 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 SUPERFAMILY SSF51998 168 688 4.88E-171 T 28-03-2018 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 SUPERFAMILY SSF48168 10 167 3.66E-40 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 10 701 0.0 T 28-03-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 Pfam PF02867 Ribonucleotide reductase, barrel domain 169 685 2.2E-136 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 PRINTS PR01183 Ribonucleotide reductase large chain signature 377 388 1.3E-27 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 PRINTS PR01183 Ribonucleotide reductase large chain signature 460 482 1.3E-27 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 PRINTS PR01183 Ribonucleotide reductase large chain signature 488 511 1.3E-27 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 PRINTS PR01183 Ribonucleotide reductase large chain signature 244 263 1.3E-27 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 PRINTS PR01183 Ribonucleotide reductase large chain signature 570 597 1.3E-27 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 95 688 6.0E-163 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS02315 95b97c27282653754e5605d608d0a515 701 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 93 164 5.4E-14 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS07835 0ca09e660f13d8b8d0fa5f3955bca1ef 498 SUPERFAMILY SSF56601 35 365 1.72E-79 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like RK98_RS07835 0ca09e660f13d8b8d0fa5f3955bca1ef 498 Pfam PF00144 Beta-lactamase 43 356 3.6E-71 T 28-03-2018 IPR001466 Beta-lactamase-related RK98_RS07835 0ca09e660f13d8b8d0fa5f3955bca1ef 498 Gene3D G3DSA:3.40.710.10 29 370 3.6E-87 T 28-03-2018 RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 TIGRFAM TIGR00277 HDIG: HDIG domain 331 408 6.4E-25 T 28-03-2018 IPR006675 HDIG domain RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 Pfam PF01966 HD domain 336 427 3.0E-19 T 28-03-2018 IPR006674 HD domain RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 SMART SM00471 331 437 1.3E-12 T 28-03-2018 IPR003607 HD/PDEase domain RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 SMART SM00322 207 274 6.2E-7 T 28-03-2018 IPR004087 K Homology domain GO:0003676 RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 Hamap MF_00335 Ribonuclease Y [rny]. 4 519 25.421 T 28-03-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 SUPERFAMILY SSF109604 324 469 9.2E-31 T 28-03-2018 RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 Gene3D G3DSA:3.30.300.20 33 242 2.6E-8 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 SUPERFAMILY SSF54791 207 303 8.14E-17 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 Gene3D G3DSA:1.10.3210.10 243 476 2.8E-37 T 28-03-2018 RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 Pfam PF12072 Domain of unknown function (DUF3552) 6 204 1.2E-62 T 28-03-2018 IPR022711 Ribonuclease Y, N-terminal RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 7 519 4.4E-240 T 28-03-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 RK98_RS12850 fe44e803551f5ef4414e23577b34d288 519 Pfam PF00013 KH domain 212 268 1.9E-6 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 RK98_RS14675 06d76d9c7b74275cd052d44f937655bc 424 Gene3D G3DSA:1.20.272.10 238 331 7.0E-36 T 28-03-2018 RK98_RS14675 06d76d9c7b74275cd052d44f937655bc 424 Gene3D G3DSA:1.10.8.60 140 229 2.3E-20 T 28-03-2018 RK98_RS14675 06d76d9c7b74275cd052d44f937655bc 424 Pfam PF12002 MgsA AAA+ ATPase C terminal 254 418 3.8E-64 T 28-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal RK98_RS14675 06d76d9c7b74275cd052d44f937655bc 424 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 43 145 2.3E-16 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS14675 06d76d9c7b74275cd052d44f937655bc 424 Gene3D G3DSA:3.40.50.300 1 139 1.1E-26 T 28-03-2018 RK98_RS14675 06d76d9c7b74275cd052d44f937655bc 424 Pfam PF16193 AAA C-terminal domain 175 253 7.4E-24 T 28-03-2018 IPR032423 AAA C-terminal domain RK98_RS14675 06d76d9c7b74275cd052d44f937655bc 424 SUPERFAMILY SSF48019 239 421 8.5E-69 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RK98_RS14675 06d76d9c7b74275cd052d44f937655bc 424 Gene3D G3DSA:1.10.3710.10 334 424 9.9E-28 T 28-03-2018 RK98_RS14675 06d76d9c7b74275cd052d44f937655bc 424 SUPERFAMILY SSF52540 4 220 3.58E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14675 06d76d9c7b74275cd052d44f937655bc 424 SMART SM00382 39 151 1.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS12350 f070d168be31ad0867358c10fb29233a 205 Gene3D G3DSA:1.20.5.620 83 141 2.5E-4 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain RK98_RS12350 f070d168be31ad0867358c10fb29233a 205 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 35 3.9E-7 T 28-03-2018 IPR019933 DivIVA domain RK98_RS12350 f070d168be31ad0867358c10fb29233a 205 Pfam PF05103 DivIVA protein 4 133 1.2E-34 T 28-03-2018 IPR007793 DivIVA family RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 4.6E-40 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 SUPERFAMILY SSF55021 651 728 5.95E-8 T 28-03-2018 RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 SMART SM00954 240 350 1.9E-68 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 SUPERFAMILY SSF81301 199 371 6.21E-64 T 28-03-2018 RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 Gene3D G3DSA:3.30.70.260 649 729 1.9E-9 T 28-03-2018 RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 Gene3D G3DSA:3.10.20.30 389 462 7.0E-21 T 28-03-2018 IPR012675 Beta-grasp domain RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 SUPERFAMILY SSF109604 10 195 2.04E-72 T 28-03-2018 RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 Pfam PF13291 ACT domain 650 726 4.5E-18 T 28-03-2018 IPR002912 ACT domain RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 SMART SM00471 46 158 6.5E-7 T 28-03-2018 IPR003607 HD/PDEase domain RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 Gene3D G3DSA:3.30.460.10 193 331 3.8E-43 T 28-03-2018 RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 SUPERFAMILY SSF81271 382 454 1.37E-22 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 32 726 1.6E-240 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 Pfam PF13328 HD domain 34 180 9.6E-46 T 28-03-2018 IPR003607 HD/PDEase domain RK98_RS14715 d53aadccb61b7b9aaf3b19affd1ce72b 729 Pfam PF02824 TGS domain 395 454 6.2E-20 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 RK98_RS14725 5e1185639e89d5f0d2cd7768aebf1393 757 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 28 557 7.9E-194 T 28-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 RK98_RS14725 5e1185639e89d5f0d2cd7768aebf1393 757 Gene3D G3DSA:3.90.1640.10 60 313 1.8E-24 T 28-03-2018 RK98_RS14725 5e1185639e89d5f0d2cd7768aebf1393 757 Pfam PF02272 DHHA1 domain 312 436 3.3E-21 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 RK98_RS14725 5e1185639e89d5f0d2cd7768aebf1393 757 Pfam PF01368 DHH family 81 225 1.3E-12 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 RK98_RS14725 5e1185639e89d5f0d2cd7768aebf1393 757 SUPERFAMILY SSF64182 57 443 3.66E-116 T 28-03-2018 RK98_RS14725 5e1185639e89d5f0d2cd7768aebf1393 757 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 563 752 1.1E-57 T 28-03-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal RK98_RS08705 2ca36693f0e523a3e0d6da7a189a177e 100 Gene3D G3DSA:3.30.280.10 2 99 2.0E-46 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08705 2ca36693f0e523a3e0d6da7a189a177e 100 SUPERFAMILY SSF54111 2 99 4.19E-44 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08705 2ca36693f0e523a3e0d6da7a189a177e 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.02 T 28-03-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08705 2ca36693f0e523a3e0d6da7a189a177e 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-38 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08705 2ca36693f0e523a3e0d6da7a189a177e 100 PIRSF PIRSF001223 1 100 9.7E-50 T 28-03-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08705 2ca36693f0e523a3e0d6da7a189a177e 100 Pfam PF00547 Urease, gamma subunit 2 99 9.0E-46 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08705 2ca36693f0e523a3e0d6da7a189a177e 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 2 99 5.0E-46 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS00315 bb239393105c9584cd5e2116c34c23d0 263 SUPERFAMILY SSF56112 2 226 7.94E-26 T 28-03-2018 IPR011009 Protein kinase-like domain RK98_RS00315 bb239393105c9584cd5e2116c34c23d0 263 Gene3D G3DSA:3.90.1200.10 29 257 7.2E-21 T 28-03-2018 RK98_RS00315 bb239393105c9584cd5e2116c34c23d0 263 Pfam PF01636 Phosphotransferase enzyme family 22 215 9.6E-20 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase RK98_RS07015 386be2a4a5dc82b00911a9164b1e3b17 354 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 84 103 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 RK98_RS07015 386be2a4a5dc82b00911a9164b1e3b17 354 Pfam PF01180 Dihydroorotate dehydrogenase 49 338 1.8E-72 T 28-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 RK98_RS07015 386be2a4a5dc82b00911a9164b1e3b17 354 Gene3D G3DSA:3.20.20.70 1 354 1.5E-66 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS07015 386be2a4a5dc82b00911a9164b1e3b17 354 PIRSF PIRSF000164 22 354 5.7E-105 T 28-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 RK98_RS07015 386be2a4a5dc82b00911a9164b1e3b17 354 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 290 310 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 RK98_RS07015 386be2a4a5dc82b00911a9164b1e3b17 354 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 2 353 1.1E-98 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 RK98_RS07015 386be2a4a5dc82b00911a9164b1e3b17 354 SUPERFAMILY SSF51395 1 352 4.89E-90 T 28-03-2018 RK98_RS12545 185b5c03d03a974e7db663b073511bc9 308 SUPERFAMILY SSF52151 4 119 7.59E-73 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RK98_RS12545 185b5c03d03a974e7db663b073511bc9 308 SUPERFAMILY SSF52151 188 304 7.59E-73 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 RK98_RS12545 185b5c03d03a974e7db663b073511bc9 308 Pfam PF00698 Acyl transferase domain 7 284 1.5E-35 T 28-03-2018 IPR014043 Acyl transferase RK98_RS12545 185b5c03d03a974e7db663b073511bc9 308 PIRSF PIRSF000446 1 305 9.8E-101 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RK98_RS12545 185b5c03d03a974e7db663b073511bc9 308 SUPERFAMILY SSF55048 127 195 5.49E-15 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 RK98_RS12545 185b5c03d03a974e7db663b073511bc9 308 Gene3D G3DSA:3.30.70.250 141 186 2.1E-19 T 28-03-2018 RK98_RS12545 185b5c03d03a974e7db663b073511bc9 308 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 304 3.2E-29 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain RK98_RS12545 185b5c03d03a974e7db663b073511bc9 308 Gene3D G3DSA:3.40.366.10 187 307 3.0E-25 T 28-03-2018 RK98_RS12545 185b5c03d03a974e7db663b073511bc9 308 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 289 2.1E-98 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 RK98_RS12545 185b5c03d03a974e7db663b073511bc9 308 Gene3D G3DSA:3.40.366.10 3 140 1.9E-34 T 28-03-2018 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 325 410 1.5E-23 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 Gene3D G3DSA:3.90.600.10 324 412 2.4E-25 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 2.2E-32 T 28-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 412 1.0E-139 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 SUPERFAMILY SSF56059 103 319 1.03E-52 T 28-03-2018 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 SMART SM01209 102 291 2.3E-103 T 28-03-2018 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 285 292 - T 28-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 Gene3D G3DSA:3.30.1490.20 86 184 9.2E-22 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 SUPERFAMILY SSF52440 1 102 9.78E-33 T 28-03-2018 IPR016185 Pre-ATP-grasp domain RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 412 37.444 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 Gene3D G3DSA:3.30.470.20 186 323 1.1E-50 T 28-03-2018 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 Gene3D G3DSA:3.40.50.20 2 85 2.1E-32 T 28-03-2018 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 102 291 3.0E-66 T 28-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 SUPERFAMILY SSF51246 322 412 2.67E-23 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 RK98_RS11685 0562fca92c504e085a7e3d2022686b41 415 SMART SM01210 323 412 2.1E-33 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RK98_RS06205 8acf0650fcf8aebe029768661164cf1c 262 Pfam PF09648 YycH protein 37 253 2.5E-50 T 28-03-2018 IPR018604 Regulatory protein YycH-like GO:0016021 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 8.3E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 295 318 8.3E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 8.3E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 8.3E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 Gene3D G3DSA:3.40.50.1370 165 332 2.4E-52 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 3.5E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 3.5E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 309 320 3.5E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 3.5E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 3.5E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 SUPERFAMILY SSF53671 2 332 6.03E-101 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 331 81.149 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 328 7.7E-57 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 330 4.3E-123 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 Gene3D G3DSA:3.40.50.1370 5 164 6.8E-53 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12220 0962c1534c7480ea1a6a4def6d773d48 333 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 9.5E-45 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RK98_RS13025 e9a720796bdabe36046d10dc4ea5a17a 341 Gene3D G3DSA:3.90.1150.10 255 341 1.9E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS13025 e9a720796bdabe36046d10dc4ea5a17a 341 SUPERFAMILY SSF53383 2 341 1.45E-75 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS13025 e9a720796bdabe36046d10dc4ea5a17a 341 Gene3D G3DSA:3.40.640.10 1 254 9.9E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS13025 e9a720796bdabe36046d10dc4ea5a17a 341 Pfam PF01212 Beta-eliminating lyase 27 280 1.6E-28 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 RK98_RS08445 ced670c641f6218fb767b98e0bc2558a 217 Pfam PF03475 3-alpha domain 173 211 9.1E-7 T 28-03-2018 IPR005163 3-alpha domain RK98_RS08445 ced670c641f6218fb767b98e0bc2558a 217 SUPERFAMILY SSF50800 1 214 9.94E-62 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain RK98_RS08445 ced670c641f6218fb767b98e0bc2558a 217 Pfam PF03473 MOSC domain 51 160 1.0E-12 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 RK98_RS08445 ced670c641f6218fb767b98e0bc2558a 217 Gene3D G3DSA:2.40.33.20 1 217 1.0E-37 T 28-03-2018 RK98_RS11350 f24d0739476887615abc2e25d782172f 522 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS11350 f24d0739476887615abc2e25d782172f 522 TIGRFAM TIGR00835 agcS: amino acid carrier protein 14 479 6.3E-141 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS11350 f24d0739476887615abc2e25d782172f 522 Pfam PF01235 Sodium:alanine symporter family 50 485 1.1E-150 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS11350 f24d0739476887615abc2e25d782172f 522 PRINTS PR00175 Sodium/alanine symporter signature 208 227 5.7E-56 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS11350 f24d0739476887615abc2e25d782172f 522 PRINTS PR00175 Sodium/alanine symporter signature 382 404 5.7E-56 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS11350 f24d0739476887615abc2e25d782172f 522 PRINTS PR00175 Sodium/alanine symporter signature 299 317 5.7E-56 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS11350 f24d0739476887615abc2e25d782172f 522 PRINTS PR00175 Sodium/alanine symporter signature 180 198 5.7E-56 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS11350 f24d0739476887615abc2e25d782172f 522 PRINTS PR00175 Sodium/alanine symporter signature 87 109 5.7E-56 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS11350 f24d0739476887615abc2e25d782172f 522 PRINTS PR00175 Sodium/alanine symporter signature 448 468 5.7E-56 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 RK98_RS14720 9cd10624df1741b31a760196eab5c6ea 172 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 2.6E-69 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 RK98_RS14720 9cd10624df1741b31a760196eab5c6ea 172 SUPERFAMILY SSF53271 3 164 7.1E-51 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like RK98_RS14720 9cd10624df1741b31a760196eab5c6ea 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.268 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 RK98_RS14720 9cd10624df1741b31a760196eab5c6ea 172 Pfam PF00156 Phosphoribosyl transferase domain 35 149 2.2E-14 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RK98_RS14720 9cd10624df1741b31a760196eab5c6ea 172 Gene3D G3DSA:3.40.50.2020 1 172 4.5E-40 T 28-03-2018 RK98_RS00830 956a5dadeddda8cd5f7d58feab3c6b23 313 Gene3D G3DSA:1.10.3210.10 117 308 1.2E-14 T 28-03-2018 RK98_RS00830 956a5dadeddda8cd5f7d58feab3c6b23 313 Pfam PF01966 HD domain 161 277 2.3E-10 T 28-03-2018 IPR006674 HD domain RK98_RS00830 956a5dadeddda8cd5f7d58feab3c6b23 313 SUPERFAMILY SSF50249 29 90 1.23E-6 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS00830 956a5dadeddda8cd5f7d58feab3c6b23 313 Pfam PF01336 OB-fold nucleic acid binding domain 27 88 2.1E-8 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RK98_RS00830 956a5dadeddda8cd5f7d58feab3c6b23 313 Gene3D G3DSA:2.40.50.140 1 97 1.1E-11 T 28-03-2018 RK98_RS00830 956a5dadeddda8cd5f7d58feab3c6b23 313 SUPERFAMILY SSF109604 137 281 9.11E-17 T 28-03-2018 RK98_RS00830 956a5dadeddda8cd5f7d58feab3c6b23 313 SMART SM00471 155 287 9.9E-5 T 28-03-2018 IPR003607 HD/PDEase domain RK98_RS01460 c0708892554e634332536cfa69dc6d88 346 SUPERFAMILY SSF56235 104 328 4.78E-13 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS01460 c0708892554e634332536cfa69dc6d88 346 Gene3D G3DSA:3.60.60.10 97 337 4.9E-29 T 28-03-2018 RK98_RS01460 c0708892554e634332536cfa69dc6d88 346 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 105 312 2.0E-70 T 28-03-2018 IPR005079 Peptidase C45 RK98_RS14410 edd9666bb5d02197589f136531470243 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 5.3E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14410 edd9666bb5d02197589f136531470243 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 5.3E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14410 edd9666bb5d02197589f136531470243 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 5.3E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14410 edd9666bb5d02197589f136531470243 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 5.3E-16 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14410 edd9666bb5d02197589f136531470243 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 28-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS14410 edd9666bb5d02197589f136531470243 58 Gene3D G3DSA:1.20.5.1150 16 52 7.1E-19 T 28-03-2018 RK98_RS14410 edd9666bb5d02197589f136531470243 58 Pfam PF01165 Ribosomal protein S21 5 57 5.9E-22 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14410 edd9666bb5d02197589f136531470243 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 58 1.1E-21 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14410 edd9666bb5d02197589f136531470243 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 1.0E-8 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14410 edd9666bb5d02197589f136531470243 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.847 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS02045 60e7b5d7b6aac96da5b1fe6828e8ecf8 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 75 4.6E-24 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RK98_RS02045 60e7b5d7b6aac96da5b1fe6828e8ecf8 77 Pfam PF03840 Preprotein translocase SecG subunit 4 75 7.5E-24 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RK98_RS02045 60e7b5d7b6aac96da5b1fe6828e8ecf8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 2.4E-12 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RK98_RS02045 60e7b5d7b6aac96da5b1fe6828e8ecf8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 56 77 2.4E-12 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RK98_RS02045 60e7b5d7b6aac96da5b1fe6828e8ecf8 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 2.4E-12 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 PIRSF PIRSF036979 2 298 5.7E-34 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 Pfam PF00491 Arginase family 7 295 9.6E-77 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 ProSitePatterns PS01053 Arginase family signature. 227 248 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 SUPERFAMILY SSF52768 7 298 1.8E-91 T 28-03-2018 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 TIGRFAM TIGR01229 rocF_arginase: arginase 9 302 4.8E-99 T 28-03-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 PRINTS PR00116 Arginase signature 174 192 3.9E-45 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 PRINTS PR00116 Arginase signature 259 273 3.9E-45 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 PRINTS PR00116 Arginase signature 99 114 3.9E-45 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 PRINTS PR00116 Arginase signature 122 149 3.9E-45 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 PRINTS PR00116 Arginase signature 224 253 3.9E-45 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 RK98_RS09400 68b9140be94a327afeaa6a483d8249b7 302 Gene3D G3DSA:3.40.800.10 1 298 1.4E-88 T 28-03-2018 RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 Gene3D G3DSA:3.30.70.260 331 400 5.8E-11 T 28-03-2018 RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 Gene3D G3DSA:3.30.70.260 237 330 1.2E-11 T 28-03-2018 RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 PIRSF PIRSF000726 3 61 2.0E-12 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 PIRSF PIRSF000726 52 401 1.8E-92 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 Gene3D G3DSA:3.40.1160.10 2 236 8.7E-52 T 28-03-2018 RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 SUPERFAMILY SSF55021 249 323 1.68E-8 T 28-03-2018 RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 SUPERFAMILY SSF53633 4 242 5.11E-59 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 SUPERFAMILY SSF55021 334 400 1.6E-12 T 28-03-2018 RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 Pfam PF00696 Amino acid kinase family 4 228 9.9E-43 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS13450 51ab0693983fef6dc8bbf3c89dabc22e 401 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 60 399 1.1E-91 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 277 337 3.0E-7 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 PRINTS PR01800 Staphylococcus aureus exotoxin signature 244 255 5.1E-26 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 5.1E-26 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 PRINTS PR01800 Staphylococcus aureus exotoxin signature 284 300 5.1E-26 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 PRINTS PR01800 Staphylococcus aureus exotoxin signature 323 338 5.1E-26 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 Gene3D G3DSA:3.10.20.120 244 356 1.6E-36 T 28-03-2018 RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 285 308 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 SUPERFAMILY SSF54334 260 355 8.9E-27 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 170 253 8.1E-32 T 28-03-2018 IPR015282 Staphylococcal superantigen-like OB-fold domain RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 SUPERFAMILY SSF50203 161 255 5.49E-31 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 PRINTS PR01898 Bacterial superantigen superfamily signature 242 255 3.7E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 PRINTS PR01898 Bacterial superantigen superfamily signature 285 298 3.7E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 PRINTS PR01898 Bacterial superantigen superfamily signature 298 312 3.7E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 PRINTS PR01898 Bacterial superantigen superfamily signature 338 354 3.7E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 PRINTS PR01898 Bacterial superantigen superfamily signature 213 239 3.7E-17 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04060 67961553d4142bc241a5d481cacc9083 356 Gene3D G3DSA:2.40.50.110 178 243 1.6E-26 T 28-03-2018 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 324 534 8.4E-32 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 Gene3D G3DSA:3.10.20.30 1 64 1.3E-21 T 28-03-2018 IPR012675 Beta-grasp domain RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 SUPERFAMILY SSF55681 242 531 2.19E-95 T 28-03-2018 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 Gene3D G3DSA:3.30.54.20 147 186 3.6E-20 T 28-03-2018 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 Gene3D G3DSA:3.30.930.10 220 537 4.4E-107 T 28-03-2018 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 SMART SM00863 169 218 1.3E-25 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 Gene3D G3DSA:3.30.980.10 67 146 8.0E-27 T 28-03-2018 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 641 34.904 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 SUPERFAMILY SSF52954 536 639 5.13E-34 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 513 526 1.7E-45 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 1.7E-45 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 470 498 1.7E-45 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 1.7E-45 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 540 552 1.7E-45 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 SUPERFAMILY SSF55186 66 240 6.93E-68 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 Gene3D G3DSA:3.40.50.800 538 645 1.7E-30 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 637 7.6E-238 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 6.6E-17 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 Pfam PF02824 TGS domain 4 63 2.0E-13 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 SUPERFAMILY SSF81271 4 63 2.07E-15 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RK98_RS14980 6d227edc0c42d6a968eeee5a8534d6d6 645 Pfam PF03129 Anticodon binding domain 547 632 1.5E-25 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS11265 db4aedf712da04d0a4d8b45275e3ce3c 293 SUPERFAMILY SSF161098 77 274 5.23E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS11265 db4aedf712da04d0a4d8b45275e3ce3c 293 Gene3D G3DSA:1.10.3720.10 11 281 2.1E-40 T 28-03-2018 RK98_RS11265 db4aedf712da04d0a4d8b45275e3ce3c 293 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 7 51 2.2E-11 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RK98_RS11265 db4aedf712da04d0a4d8b45275e3ce3c 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 291 3.9E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 Gene3D G3DSA:3.90.550.10 1 239 5.6E-62 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 351 1.1E-7 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 394 427 6.2E-7 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 259 282 1.6E-4 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 Pfam PF00483 Nucleotidyl transferase 5 209 1.4E-23 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 402 430 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 449 1.2E-177 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 SUPERFAMILY SSF53448 3 306 1.4E-63 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 450 40.51 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 Gene3D G3DSA:2.160.10.10 343 450 1.0E-18 T 28-03-2018 RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 Gene3D G3DSA:2.160.10.10 240 342 1.5E-28 T 28-03-2018 RK98_RS03625 60bb2a28f5d4f66a8ebb5d498d1c6d0b 450 SUPERFAMILY SSF51161 254 443 9.33E-46 T 28-03-2018 IPR011004 Trimeric LpxA-like RK98_RS02950 6ab7790ed91365364b6f2af4d669781f 239 Gene3D G3DSA:3.40.50.1000 1 45 0.041 T 28-03-2018 IPR023214 HAD-like domain RK98_RS02950 6ab7790ed91365364b6f2af4d669781f 239 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 145 196 7.3E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RK98_RS02950 6ab7790ed91365364b6f2af4d669781f 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 2.4E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RK98_RS02950 6ab7790ed91365364b6f2af4d669781f 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 2.4E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RK98_RS02950 6ab7790ed91365364b6f2af4d669781f 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 2.4E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RK98_RS02950 6ab7790ed91365364b6f2af4d669781f 239 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 2.4E-14 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RK98_RS02950 6ab7790ed91365364b6f2af4d669781f 239 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 195 3.0E-28 T 28-03-2018 IPR023214 HAD-like domain RK98_RS02950 6ab7790ed91365364b6f2af4d669781f 239 Gene3D G3DSA:3.40.50.1000 76 232 1.7E-26 T 28-03-2018 IPR023214 HAD-like domain RK98_RS02950 6ab7790ed91365364b6f2af4d669781f 239 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 87 190 4.0E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RK98_RS02950 6ab7790ed91365364b6f2af4d669781f 239 SUPERFAMILY SSF56784 3 224 1.02E-37 T 28-03-2018 IPR023214 HAD-like domain RK98_RS14450 0efddfe9c07edc28cbe691eac2dbdc04 374 SMART SM00729 3 217 2.2E-61 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RK98_RS14450 0efddfe9c07edc28cbe691eac2dbdc04 374 Pfam PF06969 HemN C-terminal domain 297 359 1.2E-14 T 28-03-2018 IPR010723 HemN, C-terminal RK98_RS14450 0efddfe9c07edc28cbe691eac2dbdc04 374 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 5 357 6.0E-114 T 28-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 RK98_RS14450 0efddfe9c07edc28cbe691eac2dbdc04 374 SUPERFAMILY SSF102114 5 371 3.92E-114 T 28-03-2018 RK98_RS14450 0efddfe9c07edc28cbe691eac2dbdc04 374 Gene3D G3DSA:3.20.20.70 5 316 2.7E-51 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS14450 0efddfe9c07edc28cbe691eac2dbdc04 374 Pfam PF04055 Radical SAM superfamily 8 172 1.1E-20 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS14430 2450880958b50747fb4313d834893737 379 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 355 2.5E-140 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RK98_RS14430 2450880958b50747fb4313d834893737 379 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 375 40.693 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 RK98_RS14430 2450880958b50747fb4313d834893737 379 SUPERFAMILY SSF49493 116 157 1.96E-20 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RK98_RS14430 2450880958b50747fb4313d834893737 379 SUPERFAMILY SSF49493 220 262 1.96E-20 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RK98_RS14430 2450880958b50747fb4313d834893737 379 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 28-03-2018 IPR018253 DnaJ domain, conserved site RK98_RS14430 2450880958b50747fb4313d834893737 379 Pfam PF01556 DnaJ C terminal domain 122 339 1.6E-44 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal RK98_RS14430 2450880958b50747fb4313d834893737 379 Gene3D G3DSA:2.60.260.20 117 176 8.5E-12 T 28-03-2018 RK98_RS14430 2450880958b50747fb4313d834893737 379 Pfam PF00684 DnaJ central domain 149 213 1.9E-13 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RK98_RS14430 2450880958b50747fb4313d834893737 379 SUPERFAMILY SSF49493 265 350 5.49E-24 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 RK98_RS14430 2450880958b50747fb4313d834893737 379 SMART SM00271 4 61 1.3E-32 T 28-03-2018 IPR001623 DnaJ domain RK98_RS14430 2450880958b50747fb4313d834893737 379 PRINTS PR00625 DnaJ domain signature 41 61 2.5E-32 T 28-03-2018 IPR001623 DnaJ domain RK98_RS14430 2450880958b50747fb4313d834893737 379 PRINTS PR00625 DnaJ domain signature 61 80 2.5E-32 T 28-03-2018 IPR001623 DnaJ domain RK98_RS14430 2450880958b50747fb4313d834893737 379 PRINTS PR00625 DnaJ domain signature 7 25 2.5E-32 T 28-03-2018 IPR001623 DnaJ domain RK98_RS14430 2450880958b50747fb4313d834893737 379 PRINTS PR00625 DnaJ domain signature 25 40 2.5E-32 T 28-03-2018 IPR001623 DnaJ domain RK98_RS14430 2450880958b50747fb4313d834893737 379 Gene3D G3DSA:2.60.260.20 261 372 6.9E-29 T 28-03-2018 RK98_RS14430 2450880958b50747fb4313d834893737 379 SUPERFAMILY SSF46565 2 105 9.29E-38 T 28-03-2018 IPR001623 DnaJ domain RK98_RS14430 2450880958b50747fb4313d834893737 379 SUPERFAMILY SSF57938 136 216 8.37E-19 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 RK98_RS14430 2450880958b50747fb4313d834893737 379 Gene3D G3DSA:1.10.287.110 1 116 7.7E-38 T 28-03-2018 IPR001623 DnaJ domain RK98_RS14430 2450880958b50747fb4313d834893737 379 Gene3D G3DSA:2.60.260.20 177 260 4.7E-17 T 28-03-2018 RK98_RS14430 2450880958b50747fb4313d834893737 379 Pfam PF00226 DnaJ domain 5 66 7.6E-28 T 28-03-2018 IPR001623 DnaJ domain RK98_RS00585 c06f4a667160ed2b658882e602b6943f 409 Gene3D G3DSA:3.90.220.20 2 175 3.5E-38 T 28-03-2018 RK98_RS00585 c06f4a667160ed2b658882e602b6943f 409 SUPERFAMILY SSF116734 5 224 1.6E-53 T 28-03-2018 RK98_RS00585 c06f4a667160ed2b658882e602b6943f 409 Gene3D G3DSA:3.90.220.20 192 394 8.1E-25 T 28-03-2018 RK98_RS00585 c06f4a667160ed2b658882e602b6943f 409 Pfam PF01420 Type I restriction modification DNA specificity domain 20 201 1.2E-19 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RK98_RS00585 c06f4a667160ed2b658882e602b6943f 409 Pfam PF01420 Type I restriction modification DNA specificity domain 227 388 3.5E-13 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RK98_RS00585 c06f4a667160ed2b658882e602b6943f 409 SUPERFAMILY SSF116734 223 408 2.62E-26 T 28-03-2018 RK98_RS07935 778a344bdee89e394e3b9d273d75cb7a 452 Gene3D G3DSA:3.90.1150.10 331 451 1.2E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS07935 778a344bdee89e394e3b9d273d75cb7a 452 Gene3D G3DSA:3.40.640.10 80 330 3.9E-67 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS07935 778a344bdee89e394e3b9d273d75cb7a 452 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 3 447 51.973 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 RK98_RS07935 778a344bdee89e394e3b9d273d75cb7a 452 Gene3D G3DSA:3.90.1150.10 1 79 1.4E-12 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS07935 778a344bdee89e394e3b9d273d75cb7a 452 Pfam PF00202 Aminotransferase class-III 28 444 2.0E-115 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS07935 778a344bdee89e394e3b9d273d75cb7a 452 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS07935 778a344bdee89e394e3b9d273d75cb7a 452 PIRSF PIRSF000521 30 447 1.7E-39 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS07935 778a344bdee89e394e3b9d273d75cb7a 452 SUPERFAMILY SSF53383 11 444 5.51E-126 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS07935 778a344bdee89e394e3b9d273d75cb7a 452 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 15 444 3.2E-166 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 RK98_RS03585 d3f20f1d0b391f114698e1a37c2578da 87 SMART SM00363 1 64 1.3E-6 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS03585 d3f20f1d0b391f114698e1a37c2578da 87 Pfam PF01479 S4 domain 1 47 8.6E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS03585 d3f20f1d0b391f114698e1a37c2578da 87 PIRSF PIRSF038881 1 87 5.9E-35 T 28-03-2018 IPR025490 RNA-binding protein, HP1423 type RK98_RS03585 d3f20f1d0b391f114698e1a37c2578da 87 SUPERFAMILY SSF55174 1 76 3.4E-19 T 28-03-2018 RK98_RS03585 d3f20f1d0b391f114698e1a37c2578da 87 Gene3D G3DSA:3.10.290.10 1 87 3.4E-15 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 SUPERFAMILY SSF160443 705 781 1.18E-9 T 28-03-2018 IPR002625 Smr domain RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 781 21.098 T 28-03-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 Pfam PF00488 MutS domain V 332 512 6.3E-35 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 SMART SM00463 704 782 9.6E-25 T 28-03-2018 IPR002625 Smr domain RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 411 427 - T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 Pfam PF01713 Smr domain 707 782 1.1E-18 T 28-03-2018 IPR002625 Smr domain RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 782 1.4E-235 T 28-03-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 PIRSF PIRSF005814 1 782 8.8E-284 T 28-03-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 SUPERFAMILY SSF52540 294 518 2.57E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 Gene3D G3DSA:3.40.50.300 293 558 3.1E-34 T 28-03-2018 RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 SUPERFAMILY SSF48334 20 289 2.62E-18 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 SMART SM00534 329 514 2.2E-86 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RK98_RS12070 55795484e95673ab3cb4e74afd5e0662 782 SMART SM00533 9 316 1.2E-5 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RK98_RS05230 5e2c3ab98ff0b27a29ae375c2529a983 365 SMART SM00382 29 212 3.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS05230 5e2c3ab98ff0b27a29ae375c2529a983 365 Gene3D G3DSA:2.40.50.100 305 365 1.7E-9 T 28-03-2018 RK98_RS05230 5e2c3ab98ff0b27a29ae375c2529a983 365 SUPERFAMILY SSF52540 4 244 7.15E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05230 5e2c3ab98ff0b27a29ae375c2529a983 365 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS05230 5e2c3ab98ff0b27a29ae375c2529a983 365 Gene3D G3DSA:2.40.50.100 244 303 2.7E-10 T 28-03-2018 RK98_RS05230 5e2c3ab98ff0b27a29ae375c2529a983 365 Gene3D G3DSA:3.40.50.300 1 243 3.8E-73 T 28-03-2018 RK98_RS05230 5e2c3ab98ff0b27a29ae375c2529a983 365 SUPERFAMILY SSF50331 237 364 3.89E-24 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal RK98_RS05230 5e2c3ab98ff0b27a29ae375c2529a983 365 Pfam PF03459 TOBE domain 297 355 2.1E-10 T 28-03-2018 IPR005116 Transport-associated OB, type 1 RK98_RS05230 5e2c3ab98ff0b27a29ae375c2529a983 365 Pfam PF00005 ABC transporter 21 162 3.5E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 Gene3D G3DSA:3.40.50.300 278 863 1.9E-24 T 28-03-2018 RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 Gene3D G3DSA:3.40.50.300 913 1310 3.1E-12 T 28-03-2018 RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 196 1476 0.0 T 28-03-2018 IPR023839 Firmicutes EssC, C-terminal RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 SUPERFAMILY SSF49879 1 78 2.98E-46 T 28-03-2018 IPR008984 SMAD/FHA domain GO:0005515 RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 Gene3D G3DSA:2.60.200.20 2 77 3.5E-43 T 28-03-2018 RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 SUPERFAMILY SSF52540 952 1189 1.8E-10 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 Pfam PF12538 DNA transporter 3 108 4.3E-25 T 28-03-2018 IPR022206 Firmicutes EssC, N-terminal RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 SUPERFAMILY SSF49879 79 186 4.47E-67 T 28-03-2018 IPR008984 SMAD/FHA domain GO:0005515 RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 SUPERFAMILY SSF52540 631 880 2.65E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 Pfam PF01580 FtsK/SpoIIIE family 637 845 3.0E-30 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 Pfam PF01580 FtsK/SpoIIIE family 990 1182 1.1E-23 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RK98_RS04825 c117a25c007c944906287e8d1b2d3f43 1479 Gene3D G3DSA:2.60.200.20 83 184 5.0E-27 T 28-03-2018 RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 SUPERFAMILY SSF52374 3 325 3.41E-89 T 28-03-2018 RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 Gene3D G3DSA:1.10.240.10 200 308 2.9E-30 T 28-03-2018 RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 Pfam PF00579 tRNA synthetases class I (W and Y) 3 281 3.4E-79 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 Gene3D G3DSA:3.40.50.620 1 199 4.6E-69 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 193 203 1.6E-25 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 1.6E-25 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 1.6E-25 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 1.6E-25 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 325 5.6E-109 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS11270 3bab150effcaa6856dd4662dede4afbb 329 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 326 40.739 T 28-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 RK98_RS06200 74497ea14783a20c34c71d6657dda0f7 266 SMART SM00849 15 220 1.8E-11 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS06200 74497ea14783a20c34c71d6657dda0f7 266 Gene3D G3DSA:3.60.15.10 9 255 3.3E-34 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS06200 74497ea14783a20c34c71d6657dda0f7 266 SUPERFAMILY SSF56281 11 232 1.44E-40 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS06200 74497ea14783a20c34c71d6657dda0f7 266 Pfam PF00753 Metallo-beta-lactamase superfamily 14 220 2.3E-22 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS04600 7cbd11d54a9b20b7709b49cbe773da13 448 Pfam PF03611 PTS system sugar-specific permease component 10 406 1.2E-144 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 RK98_RS11155 05b9e377de251aa016da9cd69169213b 102 Gene3D G3DSA:3.30.300.130 2 101 1.1E-27 T 28-03-2018 IPR034904 Fe-S cluster assembly domain RK98_RS11155 05b9e377de251aa016da9cd69169213b 102 Pfam PF01883 Iron-sulfur cluster assembly protein 6 80 1.1E-20 T 28-03-2018 IPR002744 MIP18 family-like RK98_RS11155 05b9e377de251aa016da9cd69169213b 102 SUPERFAMILY SSF117916 3 100 1.47E-32 T 28-03-2018 IPR034904 Fe-S cluster assembly domain RK98_RS05535 c33b908175add795370e0ae9e8052961 607 Gene3D G3DSA:3.40.50.720 291 601 2.5E-69 T 28-03-2018 RK98_RS05535 c33b908175add795370e0ae9e8052961 607 Gene3D G3DSA:3.40.50.720 261 290 0.012 T 28-03-2018 RK98_RS05535 c33b908175add795370e0ae9e8052961 607 Pfam PF13727 CoA-binding domain 69 236 1.3E-17 T 28-03-2018 RK98_RS05535 c33b908175add795370e0ae9e8052961 607 Pfam PF02719 Polysaccharide biosynthesis protein 284 567 2.8E-126 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RK98_RS05535 c33b908175add795370e0ae9e8052961 607 SUPERFAMILY SSF51735 281 546 6.78E-61 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05535 c33b908175add795370e0ae9e8052961 607 Gene3D G3DSA:3.40.50.720 137 260 1.7E-26 T 28-03-2018 RK98_RS05535 c33b908175add795370e0ae9e8052961 607 SUPERFAMILY SSF51735 139 272 5.51E-12 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS09135 b0c7b70906f1264207f3283f4ce5bd94 234 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 3 234 1.7E-75 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 RK98_RS09135 b0c7b70906f1264207f3283f4ce5bd94 234 SUPERFAMILY SSF117856 3 234 8.37E-77 T 28-03-2018 RK98_RS09135 b0c7b70906f1264207f3283f4ce5bd94 234 Gene3D G3DSA:3.30.1330.80 2 94 3.9E-30 T 28-03-2018 RK98_RS09135 b0c7b70906f1264207f3283f4ce5bd94 234 Pfam PF03306 Alpha-acetolactate decarboxylase 5 222 2.3E-75 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 RK98_RS09135 b0c7b70906f1264207f3283f4ce5bd94 234 Gene3D G3DSA:3.30.1330.80 95 198 7.4E-39 T 28-03-2018 RK98_RS09135 b0c7b70906f1264207f3283f4ce5bd94 234 PIRSF PIRSF001332 1 234 1.5E-94 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 Pfam PF00467 KOW motif 131 164 1.7E-6 T 28-03-2018 IPR005824 KOW RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 165 174 - T 28-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 PRINTS PR00338 Transcription termination factor NUSG signature 140 155 3.0E-18 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 PRINTS PR00338 Transcription termination factor NUSG signature 62 74 3.0E-18 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 PRINTS PR00338 Transcription termination factor NUSG signature 158 174 3.0E-18 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 SMART SM00738 7 118 3.9E-48 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 SUPERFAMILY SSF82679 8 119 4.97E-39 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 SUPERFAMILY SSF50104 126 182 1.42E-18 T 28-03-2018 IPR008991 Translation protein SH3-like domain RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 Gene3D G3DSA:2.30.30.30 123 182 2.4E-19 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 10 182 5.1E-61 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 7 182 27.3 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 SMART SM00739 128 155 2.7E-5 T 28-03-2018 IPR005824 KOW RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 Gene3D G3DSA:3.30.70.940 7 122 2.4E-43 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RK98_RS03355 a57110f0cfda8f155f0f542d29a0bde3 182 Pfam PF02357 Transcription termination factor nusG 8 114 1.7E-27 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 RK98_RS04695 3f2381edc3e00f162ff0c94ee5b9d747 372 Gene3D G3DSA:3.40.1190.20 57 369 5.7E-43 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS04695 3f2381edc3e00f162ff0c94ee5b9d747 372 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RK98_RS04695 3f2381edc3e00f162ff0c94ee5b9d747 372 SUPERFAMILY SSF46785 1 55 3.24E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04695 3f2381edc3e00f162ff0c94ee5b9d747 372 SUPERFAMILY SSF53613 58 356 2.96E-50 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS04695 3f2381edc3e00f162ff0c94ee5b9d747 372 Gene3D G3DSA:1.10.10.10 1 56 1.8E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04695 3f2381edc3e00f162ff0c94ee5b9d747 372 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 5.5E-10 T 28-03-2018 RK98_RS04695 3f2381edc3e00f162ff0c94ee5b9d747 372 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 304 317 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RK98_RS04695 3f2381edc3e00f162ff0c94ee5b9d747 372 Pfam PF00294 pfkB family carbohydrate kinase 60 346 5.4E-43 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB RK98_RS03715 17ad86a5532149a888a8bfdacd2e25d8 205 ProSitePatterns PS01331 Thymidylate kinase signature. 89 101 - T 28-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RK98_RS03715 17ad86a5532149a888a8bfdacd2e25d8 205 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 193 2.2E-56 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RK98_RS03715 17ad86a5532149a888a8bfdacd2e25d8 205 Gene3D G3DSA:3.40.50.300 2 201 6.9E-53 T 28-03-2018 RK98_RS03715 17ad86a5532149a888a8bfdacd2e25d8 205 SUPERFAMILY SSF52540 2 204 1.05E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03715 17ad86a5532149a888a8bfdacd2e25d8 205 Hamap MF_00165 Thymidylate kinase [tmk]. 3 202 30.063 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 RK98_RS03715 17ad86a5532149a888a8bfdacd2e25d8 205 Pfam PF02223 Thymidylate kinase 7 193 3.1E-51 T 28-03-2018 RK98_RS01300 66b360f4e9d6667abf1791952e7ad6f9 315 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 128 6.0E-34 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RK98_RS01300 66b360f4e9d6667abf1791952e7ad6f9 315 SMART SM00046 4 132 8.2E-12 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RK98_RS01300 66b360f4e9d6667abf1791952e7ad6f9 315 SUPERFAMILY SSF111331 1 297 1.96E-81 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain RK98_RS01300 66b360f4e9d6667abf1791952e7ad6f9 315 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 3 294 1.6E-92 T 28-03-2018 IPR005218 Diacylglycerol/lipid kinase RK98_RS01300 66b360f4e9d6667abf1791952e7ad6f9 315 Gene3D G3DSA:3.40.50.10330 1 132 1.1E-32 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 RK98_RS13590 400b9f3825ad1f9af62fc8a3458e7dfc 169 Gene3D G3DSA:3.40.630.30 1 169 3.9E-27 T 28-03-2018 RK98_RS13590 400b9f3825ad1f9af62fc8a3458e7dfc 169 Pfam PF00583 Acetyltransferase (GNAT) family 16 141 7.2E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS13590 400b9f3825ad1f9af62fc8a3458e7dfc 169 SUPERFAMILY SSF55729 2 165 1.04E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS01805 0b38723be067a3e559a90f9ee2607e0d 100 Pfam PF10655 Hypothetical protein of unknown function (DUF2482) 4 98 5.0E-8 T 28-03-2018 IPR018917 Protein of unknown function DUF2482 RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 SUPERFAMILY SSF49401 189 331 1.24E-31 T 28-03-2018 IPR008966 Adhesion domain RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 Gene3D G3DSA:2.60.40.1290 333 501 1.8E-46 T 28-03-2018 RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 Pfam PF02986 Fibronectin binding repeat 803 841 2.3E-10 T 28-03-2018 IPR004237 Fibronectin binding repeat RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 Pfam PF02986 Fibronectin binding repeat 765 802 1.4E-9 T 28-03-2018 IPR004237 Fibronectin binding repeat RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 Pfam PF02986 Fibronectin binding repeat 842 873 1.7E-10 T 28-03-2018 IPR004237 Fibronectin binding repeat RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 3 40 7.7E-5 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 336 492 1.9E-33 T 28-03-2018 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 Pfam PF00746 LPXTG cell wall anchor motif 996 1037 3.7E-8 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 PRINTS PR01217 Proline rich extensin signature 888 904 1.6E-9 T 28-03-2018 RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 PRINTS PR01217 Proline rich extensin signature 930 955 1.6E-9 T 28-03-2018 RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 PRINTS PR01217 Proline rich extensin signature 867 888 1.6E-9 T 28-03-2018 RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 PRINTS PR01217 Proline rich extensin signature 912 929 1.6E-9 T 28-03-2018 RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 Gene3D G3DSA:2.60.40.1280 189 331 2.4E-33 T 28-03-2018 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 SUPERFAMILY SSF49401 334 508 1.99E-45 T 28-03-2018 IPR008966 Adhesion domain RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1001 1035 1.1E-5 T 28-03-2018 RK98_RS07485 ddfcb454265b9955456b57aba2f68a78 1038 Pfam PF04650 YSIRK type signal peptide 3 27 9.5E-8 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 Pfam PF06827 Zinc finger found in FPG and IleRS 264 290 3.4E-5 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 150 241 4.5E-19 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 Gene3D G3DSA:3.20.190.10 2 145 3.0E-31 T 28-03-2018 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 Gene3D G3DSA:1.10.8.50 152 290 2.8E-37 T 28-03-2018 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 SMART SM01232 150 244 5.3E-31 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 SUPERFAMILY SSF46946 150 241 4.71E-25 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 SUPERFAMILY SSF57716 240 290 1.49E-11 T 28-03-2018 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 ProSitePatterns PS01242 Zinc finger FPG-type signature. 265 289 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 SMART SM00898 2 136 3.2E-38 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 SUPERFAMILY SSF81624 2 138 5.1E-28 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 135 4.5E-28 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 RK98_RS15015 dfbbe9bfef829e9584d14a51c51cc3dd 290 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 289 5.1E-70 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 RK98_RS11470 aff037ce74cee29c6a2bdbd52eb0314f 213 TIGRFAM TIGR03608 L_ocin_972_ABC: putative bacteriocin export ABC transporter, lactococcin 972 group 4 204 4.8E-81 T 28-03-2018 IPR019895 Putative bacteriocin export ABC transporter, lactococcin 972 group RK98_RS11470 aff037ce74cee29c6a2bdbd52eb0314f 213 SUPERFAMILY SSF52540 1 208 3.64E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11470 aff037ce74cee29c6a2bdbd52eb0314f 213 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS11470 aff037ce74cee29c6a2bdbd52eb0314f 213 Pfam PF00005 ABC transporter 17 160 1.5E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS11470 aff037ce74cee29c6a2bdbd52eb0314f 213 Gene3D G3DSA:3.40.50.300 1 212 9.2E-59 T 28-03-2018 RK98_RS11470 aff037ce74cee29c6a2bdbd52eb0314f 213 SMART SM00382 26 208 4.0E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS14415 03aabfccea41249f1d977bc5c373214c 448 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 424 1.5E-148 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 RK98_RS14415 03aabfccea41249f1d977bc5c373214c 448 SMART SM00729 143 360 4.4E-57 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RK98_RS14415 03aabfccea41249f1d977bc5c373214c 448 Gene3D G3DSA:3.80.30.20 140 374 1.9E-50 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe RK98_RS14415 03aabfccea41249f1d977bc5c373214c 448 Pfam PF01938 TRAM domain 378 423 3.6E-6 T 28-03-2018 IPR002792 TRAM domain RK98_RS14415 03aabfccea41249f1d977bc5c373214c 448 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 419 3.5E-143 T 28-03-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 RK98_RS14415 03aabfccea41249f1d977bc5c373214c 448 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 RK98_RS14415 03aabfccea41249f1d977bc5c373214c 448 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 3.3E-26 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 RK98_RS14415 03aabfccea41249f1d977bc5c373214c 448 Gene3D G3DSA:3.40.50.2300 10 127 0.004 T 28-03-2018 RK98_RS14415 03aabfccea41249f1d977bc5c373214c 448 Pfam PF04055 Radical SAM superfamily 149 318 5.8E-29 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS14415 03aabfccea41249f1d977bc5c373214c 448 SUPERFAMILY SSF102114 127 366 6.28E-57 T 28-03-2018 RK98_RS07145 bb58808f98531acb43e276f71b47a0d2 497 SUPERFAMILY SSF51905 451 490 3.08E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS07145 bb58808f98531acb43e276f71b47a0d2 497 SUPERFAMILY SSF51905 1 319 3.08E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS07145 bb58808f98531acb43e276f71b47a0d2 497 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 5 494 4.9E-99 T 28-03-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 RK98_RS07145 bb58808f98531acb43e276f71b47a0d2 497 Pfam PF01593 Flavin containing amine oxidoreductase 12 277 4.2E-23 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 RK98_RS07145 bb58808f98531acb43e276f71b47a0d2 497 Gene3D G3DSA:3.50.50.60 1 497 1.1E-32 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS01465 3de3ca8c00ec6b208bae7958bca54bf8 280 Pfam PF13349 Putative adhesin 45 280 1.2E-14 T 28-03-2018 IPR025164 Putative adhesin RK98_RS14155 5ee9b5aa02c5485975006499fa5383e0 129 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 129 2.8E-40 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 RK98_RS14155 5ee9b5aa02c5485975006499fa5383e0 129 Gene3D G3DSA:1.10.940.10 1 129 1.8E-39 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RK98_RS14155 5ee9b5aa02c5485975006499fa5383e0 129 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 1 129 20.594 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 RK98_RS14155 5ee9b5aa02c5485975006499fa5383e0 129 Pfam PF01029 NusB family 5 128 2.3E-34 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RK98_RS14155 5ee9b5aa02c5485975006499fa5383e0 129 SUPERFAMILY SSF48013 2 128 3.66E-38 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 RK98_RS14480 324e805ae704ba647fbed1f22bb73f88 228 Gene3D G3DSA:1.10.150.310 186 228 1.1E-19 T 28-03-2018 RK98_RS14480 324e805ae704ba647fbed1f22bb73f88 228 Pfam PF10531 SLBB domain 86 138 2.7E-6 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS14480 324e805ae704ba647fbed1f22bb73f88 228 Pfam PF12836 Helix-hairpin-helix motif 164 227 1.7E-25 T 28-03-2018 RK98_RS14480 324e805ae704ba647fbed1f22bb73f88 228 SUPERFAMILY SSF47781 160 227 4.22E-28 T 28-03-2018 IPR010994 RuvA domain 2-like RK98_RS14480 324e805ae704ba647fbed1f22bb73f88 228 Gene3D G3DSA:1.10.150.20 127 185 8.6E-15 T 28-03-2018 RK98_RS14480 324e805ae704ba647fbed1f22bb73f88 228 SMART SM00278 206 225 0.94 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS14480 324e805ae704ba647fbed1f22bb73f88 228 SMART SM00278 176 195 0.0066 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS14480 324e805ae704ba647fbed1f22bb73f88 228 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 164 227 2.4E-21 T 28-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain RK98_RS00810 2935a692b1214eae43d250dbd88878ce 140 PRINTS PR00332 Histidine triad family signature 26 44 2.1E-16 T 28-03-2018 IPR001310 Histidine triad (HIT) protein RK98_RS00810 2935a692b1214eae43d250dbd88878ce 140 PRINTS PR00332 Histidine triad family signature 93 103 2.1E-16 T 28-03-2018 IPR001310 Histidine triad (HIT) protein RK98_RS00810 2935a692b1214eae43d250dbd88878ce 140 PRINTS PR00332 Histidine triad family signature 5 21 2.1E-16 T 28-03-2018 IPR001310 Histidine triad (HIT) protein RK98_RS00810 2935a692b1214eae43d250dbd88878ce 140 SUPERFAMILY SSF54197 1 136 1.28E-42 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 RK98_RS00810 2935a692b1214eae43d250dbd88878ce 140 Gene3D G3DSA:3.30.428.10 1 140 4.4E-38 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 RK98_RS00810 2935a692b1214eae43d250dbd88878ce 140 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 28-03-2018 IPR019808 Histidine triad, conserved site RK98_RS00810 2935a692b1214eae43d250dbd88878ce 140 Pfam PF01230 HIT domain 12 107 1.7E-26 T 28-03-2018 IPR001310 Histidine triad (HIT) protein RK98_RS13080 c02cc9be2a6a94aa07b8aed75c152048 460 Gene3D G3DSA:3.30.70.260 370 446 1.5E-17 T 28-03-2018 RK98_RS13080 c02cc9be2a6a94aa07b8aed75c152048 460 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 444 2.9E-85 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RK98_RS13080 c02cc9be2a6a94aa07b8aed75c152048 460 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RK98_RS13080 c02cc9be2a6a94aa07b8aed75c152048 460 Pfam PF00696 Amino acid kinase family 2 276 3.6E-41 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS13080 c02cc9be2a6a94aa07b8aed75c152048 460 Gene3D G3DSA:3.40.1160.10 1 281 6.3E-51 T 28-03-2018 RK98_RS13080 c02cc9be2a6a94aa07b8aed75c152048 460 PIRSF PIRSF000726 1 448 1.5E-83 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RK98_RS13080 c02cc9be2a6a94aa07b8aed75c152048 460 SUPERFAMILY SSF53633 1 290 5.11E-64 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS13080 c02cc9be2a6a94aa07b8aed75c152048 460 SUPERFAMILY SSF55021 296 369 6.41E-14 T 28-03-2018 RK98_RS13080 c02cc9be2a6a94aa07b8aed75c152048 460 SUPERFAMILY SSF55021 373 448 4.89E-19 T 28-03-2018 RK98_RS13080 c02cc9be2a6a94aa07b8aed75c152048 460 Gene3D G3DSA:3.30.70.260 282 369 2.7E-20 T 28-03-2018 RK98_RS11530 aca9ebcd4988f8271c2c2dd55bd38235 267 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 4 262 35.031 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 RK98_RS11530 aca9ebcd4988f8271c2c2dd55bd38235 267 Gene3D G3DSA:3.40.50.1820 1 267 2.3E-51 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS11530 aca9ebcd4988f8271c2c2dd55bd38235 267 Pfam PF12697 Alpha/beta hydrolase family 17 253 2.6E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS11530 aca9ebcd4988f8271c2c2dd55bd38235 267 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 14 262 1.8E-87 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 RK98_RS11530 aca9ebcd4988f8271c2c2dd55bd38235 267 SUPERFAMILY SSF53474 6 262 1.35E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS05785 4a03a3be4a86a74b0d34352a1763ea4e 553 Gene3D G3DSA:1.20.58.220 332 444 5.2E-9 T 28-03-2018 RK98_RS05785 4a03a3be4a86a74b0d34352a1763ea4e 553 Pfam PF01895 PhoU domain 452 534 9.1E-8 T 28-03-2018 IPR026022 PhoU domain RK98_RS05785 4a03a3be4a86a74b0d34352a1763ea4e 553 SUPERFAMILY SSF109755 331 536 5.23E-27 T 28-03-2018 RK98_RS05785 4a03a3be4a86a74b0d34352a1763ea4e 553 Gene3D G3DSA:1.20.58.220 445 550 1.4E-13 T 28-03-2018 RK98_RS05785 4a03a3be4a86a74b0d34352a1763ea4e 553 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 6 313 1.3E-74 T 28-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 RK98_RS05785 4a03a3be4a86a74b0d34352a1763ea4e 553 Pfam PF02690 Na+/Pi-cotransporter 16 151 1.0E-50 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 RK98_RS05785 4a03a3be4a86a74b0d34352a1763ea4e 553 Pfam PF02690 Na+/Pi-cotransporter 143 256 5.7E-22 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 RK98_RS03955 e0a97579d9f6c369e95b8c3266ef3bcd 260 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 256 8.3E-105 T 28-03-2018 IPR007595 Csa1 family RK98_RS03955 e0a97579d9f6c369e95b8c3266ef3bcd 260 Pfam PF04507 Csa1 family 1 258 1.6E-125 T 28-03-2018 IPR007595 Csa1 family RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 Gene3D G3DSA:3.30.56.10 2 196 2.0E-47 T 28-03-2018 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 Pfam PF03147 Ferredoxin-fold anticodon binding domain 708 799 1.4E-24 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 SUPERFAMILY SSF54991 703 799 3.79E-28 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 SUPERFAMILY SSF46955 412 482 1.19E-20 T 28-03-2018 IPR009061 Putative DNA-binding domain RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 SUPERFAMILY SSF50249 41 201 2.45E-46 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 Gene3D G3DSA:3.30.930.10 497 695 3.0E-37 T 28-03-2018 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 SUPERFAMILY SSF55681 474 695 1.74E-53 T 28-03-2018 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 SMART SM00896 708 800 1.2E-39 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 2.6E-261 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 Gene3D G3DSA:3.30.56.10 408 482 4.2E-23 T 28-03-2018 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 795 47.843 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 SUPERFAMILY SSF56037 207 401 5.75E-69 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 Gene3D G3DSA:3.50.40.10 203 404 1.1E-69 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 Pfam PF03483 B3/4 domain 221 392 2.0E-65 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 Gene3D G3DSA:3.30.70.380 704 800 1.1E-22 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 SMART SM00873 220 393 4.5E-85 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 SMART SM00874 410 478 5.2E-28 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 Pfam PF03484 tRNA synthetase B5 domain 413 478 1.2E-20 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 RK98_RS12030 614348bb96b5c87c3db3e724ed8a9665 800 Pfam PF01588 Putative tRNA binding domain 45 129 4.6E-23 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 RK98_RS02825 2be74fee247040ce7340c3f67bcb0d46 254 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 69 232 8.5E-51 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RK98_RS02825 2be74fee247040ce7340c3f67bcb0d46 254 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 64 237 2.4E-47 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 RK98_RS02825 2be74fee247040ce7340c3f67bcb0d46 254 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 10 248 58.95 T 28-03-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 RK98_RS01440 a1e0e6ecb3f931408bfe30cecedd26be 342 SUPERFAMILY SSF50974 87 326 1.12E-30 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 RK98_RS01440 a1e0e6ecb3f931408bfe30cecedd26be 342 Pfam PF10282 Lactonase, 7-bladed beta-propeller 4 342 7.5E-105 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller RK98_RS01440 a1e0e6ecb3f931408bfe30cecedd26be 342 Gene3D G3DSA:2.130.10.10 1 341 2.2E-28 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 SUPERFAMILY SSF56327 147 312 9.08E-58 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 308 1.4E-130 T 28-03-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 Gene3D G3DSA:3.90.110.10 148 317 3.3E-50 T 28-03-2018 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 146 1.1E-47 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 Gene3D G3DSA:3.40.50.720 8 147 7.2E-36 T 28-03-2018 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 315 2.1E-36 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 1.8E-47 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 1.8E-47 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 1.8E-47 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 1.8E-47 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 1.8E-47 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 314 46.611 T 28-03-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 SUPERFAMILY SSF51735 3 146 4.51E-54 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 28-03-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 RK98_RS05080 87f43b86be9ac4843d01061b035beef1 317 PIRSF PIRSF000102 3 317 3.2E-111 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS11605 a3a84855317f77416ac66bdd6d114507 201 Pfam PF00510 Cytochrome c oxidase subunit III 19 196 1.8E-13 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11605 a3a84855317f77416ac66bdd6d114507 201 Gene3D G3DSA:1.20.120.80 12 198 2.0E-47 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11605 a3a84855317f77416ac66bdd6d114507 201 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 9 198 1.8E-108 T 28-03-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 RK98_RS11605 a3a84855317f77416ac66bdd6d114507 201 SUPERFAMILY SSF81452 13 196 7.19E-51 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS00660 fdd32eaee386adc5d7c63e80ccd7179d 311 Pfam PF07968 Leukocidin/Hemolysin toxin family 57 302 1.1E-85 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS00660 fdd32eaee386adc5d7c63e80ccd7179d 311 TIGRFAM TIGR01002 hlyII: beta-channel forming cytolysin 4 307 1.6E-91 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS00660 fdd32eaee386adc5d7c63e80ccd7179d 311 Gene3D G3DSA:2.70.240.10 28 306 1.6E-101 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS00660 fdd32eaee386adc5d7c63e80ccd7179d 311 SUPERFAMILY SSF56959 32 311 9.65E-110 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS00660 fdd32eaee386adc5d7c63e80ccd7179d 311 PRINTS PR01468 Staphylococcal bi-component toxin signature 124 145 2.1E-31 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS00660 fdd32eaee386adc5d7c63e80ccd7179d 311 PRINTS PR01468 Staphylococcal bi-component toxin signature 235 252 2.1E-31 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS00660 fdd32eaee386adc5d7c63e80ccd7179d 311 PRINTS PR01468 Staphylococcal bi-component toxin signature 61 80 2.1E-31 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 Gene3D G3DSA:3.30.2090.10 741 826 2.8E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 SUPERFAMILY SSF82714 183 246 1.03E-7 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 Gene3D G3DSA:3.30.70.1430 598 739 0.0015 T 28-03-2018 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 SUPERFAMILY SSF82866 828 1048 1.09E-44 T 28-03-2018 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 Gene3D G3DSA:1.20.1640.10 827 1047 6.6E-41 T 28-03-2018 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 Gene3D G3DSA:1.20.1640.10 306 533 3.0E-46 T 28-03-2018 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 Gene3D G3DSA:3.30.70.1430 42 142 1.8E-18 T 28-03-2018 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 PRINTS PR00702 Acriflavin resistance protein family signature 423 447 1.0E-44 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 PRINTS PR00702 Acriflavin resistance protein family signature 395 416 1.0E-44 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 PRINTS PR00702 Acriflavin resistance protein family signature 368 391 1.0E-44 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.0E-44 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 PRINTS PR00702 Acriflavin resistance protein family signature 479 502 1.0E-44 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.0E-44 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 PRINTS PR00702 Acriflavin resistance protein family signature 504 527 1.0E-44 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 SUPERFAMILY SSF82693 42 132 6.02E-14 T 28-03-2018 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 Gene3D G3DSA:3.30.2090.10 180 305 1.9E-13 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 Pfam PF00873 AcrB/AcrD/AcrF family 294 1044 5.7E-165 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 Pfam PF00873 AcrB/AcrD/AcrF family 6 245 3.1E-38 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 SUPERFAMILY SSF82714 742 824 5.62E-11 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 SUPERFAMILY SSF82866 329 531 1.22E-42 T 28-03-2018 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 SUPERFAMILY SSF82693 307 346 1.52E-12 T 28-03-2018 RK98_RS08850 382847f503ba47384418bdbd991c5f27 1055 SUPERFAMILY SSF82693 135 181 1.52E-12 T 28-03-2018 RK98_RS14510 fdf4cd48b9c92342e6ced15dd464defa 268 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 5 87 2.2E-29 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RK98_RS14510 fdf4cd48b9c92342e6ced15dd464defa 268 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 263 32.209 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RK98_RS14510 fdf4cd48b9c92342e6ced15dd464defa 268 SUPERFAMILY SSF53223 2 99 4.78E-32 T 28-03-2018 RK98_RS14510 fdf4cd48b9c92342e6ced15dd464defa 268 Gene3D G3DSA:3.40.50.10860 1 108 1.1E-39 T 28-03-2018 RK98_RS14510 fdf4cd48b9c92342e6ced15dd464defa 268 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 265 5.6E-78 T 28-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 RK98_RS14510 fdf4cd48b9c92342e6ced15dd464defa 268 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 111 185 9.0E-10 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RK98_RS14510 fdf4cd48b9c92342e6ced15dd464defa 268 Gene3D G3DSA:3.40.50.720 109 267 8.3E-28 T 28-03-2018 RK98_RS14510 fdf4cd48b9c92342e6ced15dd464defa 268 SUPERFAMILY SSF51735 100 264 5.31E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS03960 7ce350ae686eb707b64eb52d6107013d 266 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 258 4.3E-122 T 28-03-2018 IPR007595 Csa1 family RK98_RS03960 7ce350ae686eb707b64eb52d6107013d 266 Pfam PF04507 Csa1 family 1 259 4.1E-110 T 28-03-2018 IPR007595 Csa1 family RK98_RS00825 88a17fa6a2997e86864b36de7a5f090d 320 SUPERFAMILY SSF54534 140 244 4.38E-26 T 28-03-2018 RK98_RS00825 88a17fa6a2997e86864b36de7a5f090d 320 Hamap MF_01145 Foldase protein PrsA [prsA]. 3 300 16.144 T 28-03-2018 IPR023059 Foldase protein PrsA GO:0003755 RK98_RS00825 88a17fa6a2997e86864b36de7a5f090d 320 Pfam PF00639 PPIC-type PPIASE domain 146 244 1.8E-28 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 RK98_RS00825 88a17fa6a2997e86864b36de7a5f090d 320 SUPERFAMILY SSF109998 49 157 3.57E-14 T 28-03-2018 IPR027304 Trigger factor/SurA domain RK98_RS00825 88a17fa6a2997e86864b36de7a5f090d 320 Gene3D G3DSA:3.10.50.40 135 245 4.6E-30 T 28-03-2018 RK98_RS00825 88a17fa6a2997e86864b36de7a5f090d 320 Gene3D G3DSA:1.10.4030.10 27 132 5.6E-9 T 28-03-2018 RK98_RS07050 12b01acfc73a5a81dd6d090e746fa756 446 Pfam PF07670 Nucleoside recognition 313 413 5.2E-6 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RK98_RS08385 599e2a5ebc6297d3dfd5478b3c5f3501 315 Gene3D G3DSA:3.30.460.20 4 121 3.7E-18 T 28-03-2018 RK98_RS08385 599e2a5ebc6297d3dfd5478b3c5f3501 315 Pfam PF01544 CorA-like Mg2+ transporter protein 27 311 1.5E-72 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RK98_RS08385 599e2a5ebc6297d3dfd5478b3c5f3501 315 SUPERFAMILY SSF143865 14 248 5.49E-44 T 28-03-2018 RK98_RS08385 599e2a5ebc6297d3dfd5478b3c5f3501 315 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 24 315 1.3E-61 T 28-03-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 RK98_RS08385 599e2a5ebc6297d3dfd5478b3c5f3501 315 Gene3D G3DSA:1.20.58.340 248 315 2.5E-22 T 28-03-2018 RK98_RS08385 599e2a5ebc6297d3dfd5478b3c5f3501 315 Gene3D G3DSA:1.20.58.340 123 247 2.3E-14 T 28-03-2018 RK98_RS08385 599e2a5ebc6297d3dfd5478b3c5f3501 315 SUPERFAMILY SSF144083 250 313 1.44E-21 T 28-03-2018 RK98_RS09000 b7ecb3d92bf35e75254b581651c1bb76 166 Gene3D G3DSA:3.30.160.20 10 72 5.6E-29 T 28-03-2018 RK98_RS09000 b7ecb3d92bf35e75254b581651c1bb76 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 36.914 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RK98_RS09000 b7ecb3d92bf35e75254b581651c1bb76 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 157 1.0E-32 T 28-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 RK98_RS09000 b7ecb3d92bf35e75254b581651c1bb76 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 6.9E-30 T 28-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 RK98_RS09000 b7ecb3d92bf35e75254b581651c1bb76 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 28-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site RK98_RS09000 b7ecb3d92bf35e75254b581651c1bb76 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 163 2.5E-70 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 RK98_RS09000 b7ecb3d92bf35e75254b581651c1bb76 166 Gene3D G3DSA:3.30.230.10 77 166 2.1E-33 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS09000 b7ecb3d92bf35e75254b581651c1bb76 166 SUPERFAMILY SSF54211 79 159 8.34E-27 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS09000 b7ecb3d92bf35e75254b581651c1bb76 166 SUPERFAMILY SSF54768 7 76 8.58E-25 T 28-03-2018 RK98_RS14775 5d91027342daa57c37fa436192013983 106 Pfam PF04327 Cysteine protease Prp 1 101 7.8E-24 T 28-03-2018 IPR007422 Cysteine protease Prp RK98_RS14775 5d91027342daa57c37fa436192013983 106 SUPERFAMILY SSF118010 1 106 1.57E-32 T 28-03-2018 IPR007422 Cysteine protease Prp RK98_RS14775 5d91027342daa57c37fa436192013983 106 Gene3D G3DSA:3.30.70.1490 1 106 6.3E-28 T 28-03-2018 IPR007422 Cysteine protease Prp RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 7.2E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 SUPERFAMILY SSF48150 1 210 5.5E-72 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 189 205 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 SMART SM00478 39 187 8.3E-58 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 Gene3D G3DSA:1.10.1670.10 119 219 5.5E-34 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 PIRSF PIRSF001435 1 214 2.3E-59 T 28-03-2018 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 SMART SM00525 188 208 3.9E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 167 4.4E-23 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 Gene3D G3DSA:1.10.340.30 20 118 1.4E-26 T 28-03-2018 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 TIGRFAM TIGR01083 nth: endonuclease III 4 196 1.8E-82 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 Hamap MF_00942 Endonuclease III [nth]. 1 211 38.118 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 RK98_RS13765 fa6bd873dea02a4227a137f7f24127f9 219 Pfam PF00633 Helix-hairpin-helix motif 101 128 3.7E-8 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 473 7.3E-151 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 284 2.5E-35 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 2.5E-35 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 2.5E-35 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 297 319 2.5E-35 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.5E-35 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 461 9.4E-28 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 332 4.3E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 1.6E-63 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 1.6E-63 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.6E-63 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 312 319 1.6E-63 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 1.6E-63 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 269 283 1.6E-63 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.6E-63 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 1.6E-63 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 1.6E-63 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 Gene3D G3DSA:3.50.50.60 3 170 3.6E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 Gene3D G3DSA:3.40.50.720 176 338 2.2E-31 T 28-03-2018 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 SUPERFAMILY SSF51905 89 340 7.48E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 SUPERFAMILY SSF51905 1 62 7.48E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 Gene3D G3DSA:3.30.390.30 339 471 3.7E-33 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 SUPERFAMILY SSF55424 348 472 7.39E-31 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RK98_RS14125 77d9b8ec9db17363c927861477f77885 473 PIRSF PIRSF000350 1 453 2.9E-80 T 28-03-2018 RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 359 365 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 71 555 2.7E-140 T 28-03-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 Pfam PF02384 N-6 DNA Methylase 239 540 1.1E-110 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 Pfam PF12161 HsdM N-terminal domain 75 224 8.2E-21 T 28-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 SUPERFAMILY SSF53335 74 112 2.3E-132 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 SUPERFAMILY SSF53335 148 574 2.3E-132 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 Gene3D G3DSA:3.40.50.150 260 535 1.7E-73 T 28-03-2018 RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 262 278 1.1E-23 T 28-03-2018 RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 288 302 1.1E-23 T 28-03-2018 RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 356 368 1.1E-23 T 28-03-2018 RK98_RS00590 bb0ed4410fd82173b6d7ba2209ac5f16 579 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 392 416 1.1E-23 T 28-03-2018 RK98_RS06190 4b2ea77532e5f37360974f744cb39666 159 SUPERFAMILY SSF75217 1 157 7.85E-59 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases RK98_RS06190 4b2ea77532e5f37360974f744cb39666 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.417 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS06190 4b2ea77532e5f37360974f744cb39666 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 7.1E-56 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS06190 4b2ea77532e5f37360974f744cb39666 159 PIRSF PIRSF004505 1 159 5.2E-54 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS06190 4b2ea77532e5f37360974f744cb39666 159 Gene3D G3DSA:3.40.1280.10 1 159 1.2E-64 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK98_RS06190 4b2ea77532e5f37360974f744cb39666 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 1.5E-61 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 140 151 2.5E-23 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 2.5E-23 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 58 77 2.5E-23 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 2.5E-23 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 153 6.5E-45 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 332 2.8E-58 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 58 65 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 SUPERFAMILY SSF53671 9 335 7.46E-101 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 Gene3D G3DSA:3.40.50.1370 153 321 1.2E-53 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 129 143 6.5E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 56 70 6.5E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 233 243 6.5E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 89 102 6.5E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 6.5E-30 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 12 335 81.096 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 13 334 7.9E-125 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS06735 a8032b0be9fffa2275b214a728376d33 336 Gene3D G3DSA:3.40.50.1370 2 152 7.3E-54 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12440 30afd08125d7c00128dd9e61e7492e15 207 Gene3D G3DSA:3.30.63.10 53 82 3.8E-24 T 28-03-2018 RK98_RS12440 30afd08125d7c00128dd9e61e7492e15 207 SUPERFAMILY SSF52540 3 194 2.52E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12440 30afd08125d7c00128dd9e61e7492e15 207 Hamap MF_00328 Guanylate kinase [gmk]. 4 188 36.51 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 RK98_RS12440 30afd08125d7c00128dd9e61e7492e15 207 SMART SM00072 5 188 1.7E-69 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RK98_RS12440 30afd08125d7c00128dd9e61e7492e15 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 185 1.1E-71 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 RK98_RS12440 30afd08125d7c00128dd9e61e7492e15 207 Gene3D G3DSA:3.40.50.300 1 52 3.9E-11 T 28-03-2018 RK98_RS12440 30afd08125d7c00128dd9e61e7492e15 207 Pfam PF00625 Guanylate kinase 8 186 9.1E-51 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit RK98_RS12440 30afd08125d7c00128dd9e61e7492e15 207 Gene3D G3DSA:3.40.50.300 83 189 3.6E-35 T 28-03-2018 RK98_RS12440 30afd08125d7c00128dd9e61e7492e15 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 41 58 - T 28-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 Gene3D G3DSA:1.10.860.10 469 566 9.7E-11 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 TIGRFAM TIGR01391 dnaG: DNA primase 2 414 4.5E-153 T 28-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 SUPERFAMILY SSF56731 115 422 3.27E-94 T 28-03-2018 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 Pfam PF01807 CHC2 zinc finger 4 98 6.5E-38 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 PIRSF PIRSF002811 1 605 1.2E-187 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 Pfam PF13155 Toprim-like 263 348 6.7E-14 T 28-03-2018 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 Pfam PF00772 DnaB-like helicase N terminal domain 469 565 2.0E-5 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 SMART SM00493 260 331 7.2E-13 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 SUPERFAMILY SSF57783 2 98 3.06E-35 T 28-03-2018 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 253 6.3E-41 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 Gene3D G3DSA:3.90.580.10 1 101 2.3E-33 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 Gene3D G3DSA:3.40.1360.10 242 366 2.5E-32 T 28-03-2018 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 Gene3D G3DSA:3.90.980.10 108 241 8.4E-42 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 Hamap MF_00974 DNA primase [dnaG]. 2 599 28.194 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 SMART SM00400 34 88 3.4E-37 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RK98_RS14345 8d756d1ef8a1b7b67b6de340dcc0c4ff 605 SUPERFAMILY SSF48024 470 566 4.05E-6 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RK98_RS04725 ad16c60ec095c8b4c557a578c559b83f 296 Gene3D G3DSA:3.40.50.1000 21 232 6.2E-22 T 28-03-2018 IPR023214 HAD-like domain RK98_RS04725 ad16c60ec095c8b4c557a578c559b83f 296 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 1 288 2.3E-120 T 28-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 RK98_RS04725 ad16c60ec095c8b4c557a578c559b83f 296 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 32 261 1.2E-54 T 28-03-2018 IPR005519 Acid phosphatase, class B-like RK98_RS04725 ad16c60ec095c8b4c557a578c559b83f 296 PIRSF PIRSF019271 1 291 1.7E-111 T 28-03-2018 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 RK98_RS04725 ad16c60ec095c8b4c557a578c559b83f 296 SUPERFAMILY SSF56784 72 270 2.16E-50 T 28-03-2018 IPR023214 HAD-like domain RK98_RS02150 31af39a8f66790a8aae43d19f6806440 279 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 258 9.3E-74 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 RK98_RS02150 31af39a8f66790a8aae43d19f6806440 279 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 RK98_RS02150 31af39a8f66790a8aae43d19f6806440 279 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 260 17.578 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 RK98_RS02150 31af39a8f66790a8aae43d19f6806440 279 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 255 3.2E-77 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 RK98_RS14850 1bf838124cdee9ab08f5a481a781f2fa 361 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 31 85 1.0E-4 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RK98_RS14850 1bf838124cdee9ab08f5a481a781f2fa 361 Pfam PF00589 Phage integrase family 167 343 4.4E-45 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS14850 1bf838124cdee9ab08f5a481a781f2fa 361 Gene3D G3DSA:1.10.443.10 163 345 2.3E-41 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS14850 1bf838124cdee9ab08f5a481a781f2fa 361 SUPERFAMILY SSF56349 31 350 3.83E-48 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS14850 1bf838124cdee9ab08f5a481a781f2fa 361 Gene3D G3DSA:1.10.150.130 19 131 7.1E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS06035 1bf838124cdee9ab08f5a481a781f2fa 361 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 31 85 1.0E-4 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RK98_RS06035 1bf838124cdee9ab08f5a481a781f2fa 361 Pfam PF00589 Phage integrase family 167 343 4.4E-45 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS06035 1bf838124cdee9ab08f5a481a781f2fa 361 Gene3D G3DSA:1.10.443.10 163 345 2.3E-41 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS06035 1bf838124cdee9ab08f5a481a781f2fa 361 SUPERFAMILY SSF56349 31 350 3.83E-48 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS06035 1bf838124cdee9ab08f5a481a781f2fa 361 Gene3D G3DSA:1.10.150.130 19 131 7.1E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS00090 7e4b688fb269db37e28ceb4ca988b1fb 315 Gene3D G3DSA:3.40.50.150 71 312 2.3E-28 T 28-03-2018 RK98_RS00090 7e4b688fb269db37e28ceb4ca988b1fb 315 Pfam PF02384 N-6 DNA Methylase 169 284 3.5E-9 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RK98_RS00090 7e4b688fb269db37e28ceb4ca988b1fb 315 SUPERFAMILY SSF53335 20 302 7.8E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS00090 7e4b688fb269db37e28ceb4ca988b1fb 315 PIRSF PIRSF026567 3 313 7.4E-114 T 28-03-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted RK98_RS14575 3d16059f29515a41fe1c00fd482f2bd8 244 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 6 212 2.3E-60 T 28-03-2018 IPR010016 KipI family RK98_RS14575 3d16059f29515a41fe1c00fd482f2bd8 244 Gene3D G3DSA:2.40.100.10 88 222 4.8E-50 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS14575 3d16059f29515a41fe1c00fd482f2bd8 244 SMART SM00796 1 204 1.9E-97 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D RK98_RS14575 3d16059f29515a41fe1c00fd482f2bd8 244 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 3 202 6.8E-72 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D RK98_RS14575 3d16059f29515a41fe1c00fd482f2bd8 244 Gene3D G3DSA:3.30.1360.40 1 73 2.3E-12 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 RK98_RS14575 3d16059f29515a41fe1c00fd482f2bd8 244 SUPERFAMILY SSF50891 90 220 7.21E-47 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS14575 3d16059f29515a41fe1c00fd482f2bd8 244 SUPERFAMILY SSF160467 3 94 1.31E-15 T 28-03-2018 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 Pfam PF00204 DNA gyrase B 224 394 2.4E-58 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 SMART SM00433 36 635 0.0 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 SUPERFAMILY SSF56719 400 637 7.59E-85 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 5 640 50.93 T 28-03-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 SMART SM00387 32 176 1.0E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 Gene3D G3DSA:3.40.50.670 405 638 2.2E-91 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 Pfam PF01751 Toprim domain 425 535 2.2E-17 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 SUPERFAMILY SSF54211 224 395 3.41E-53 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 631 2.3E-29 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 SUPERFAMILY SSF55874 7 219 2.49E-66 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 175 4.4E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR00418 DNA topoisomerase II family signature 71 84 1.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR00418 DNA topoisomerase II family signature 113 127 1.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR00418 DNA topoisomerase II family signature 426 440 1.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR00418 DNA topoisomerase II family signature 270 283 1.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR00418 DNA topoisomerase II family signature 510 527 1.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR00418 DNA topoisomerase II family signature 574 590 1.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR00418 DNA topoisomerase II family signature 530 542 1.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR00418 DNA topoisomerase II family signature 492 508 1.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR00418 DNA topoisomerase II family signature 36 51 1.4E-68 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR01159 DNA gyrase subunit B signature 314 330 1.9E-54 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR01159 DNA gyrase subunit B signature 595 607 1.9E-54 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR01159 DNA gyrase subunit B signature 378 398 1.9E-54 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR01159 DNA gyrase subunit B signature 364 378 1.9E-54 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR01159 DNA gyrase subunit B signature 223 245 1.9E-54 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR01159 DNA gyrase subunit B signature 7 17 1.9E-54 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR01159 DNA gyrase subunit B signature 182 197 1.9E-54 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR01159 DNA gyrase subunit B signature 197 210 1.9E-54 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR01159 DNA gyrase subunit B signature 611 627 1.9E-54 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 PRINTS PR01159 DNA gyrase subunit B signature 476 485 1.9E-54 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 Gene3D G3DSA:3.30.565.10 19 222 2.9E-75 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 4 643 0.0 T 28-03-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RK98_RS13240 b3703c13b016534efa2718a4b017d530 663 Gene3D G3DSA:3.30.230.10 223 396 1.1E-55 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 SUPERFAMILY SSF81665 205 296 9.94E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 SUPERFAMILY SSF81665 20 103 9.94E-11 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 Pfam PF00702 haloacid dehalogenase-like hydrolase 299 525 4.0E-31 T 28-03-2018 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 Pfam PF00122 E1-E2 ATPase 105 279 2.3E-31 T 28-03-2018 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 7 675 39.181 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 SUPERFAMILY SSF56784 299 559 2.75E-36 T 28-03-2018 IPR023214 HAD-like domain RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 Gene3D G3DSA:3.40.1110.10 313 438 8.4E-13 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 331 7.7E-33 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 370 602 8.9E-46 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 SUPERFAMILY SSF81653 110 204 2.88E-21 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 511 530 1.0E-22 T 28-03-2018 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 534 546 1.0E-22 T 28-03-2018 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 302 316 1.0E-22 T 28-03-2018 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 1.0E-22 T 28-03-2018 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 458 468 1.0E-22 T 28-03-2018 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 304 310 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 Gene3D G3DSA:2.70.150.10 6 205 4.9E-25 T 28-03-2018 RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 Gene3D G3DSA:3.40.50.1000 439 568 8.6E-33 T 28-03-2018 IPR023214 HAD-like domain RK98_RS09870 c24d92798b01435431c01efe16bfe562 675 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 6 671 2.6E-299 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 RK98_RS02960 49fd189455798427382d87bdc3f002b6 275 Pfam PF01497 Periplasmic binding protein 22 246 6.4E-34 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RK98_RS02960 49fd189455798427382d87bdc3f002b6 275 SUPERFAMILY SSF53807 18 273 3.45E-55 T 28-03-2018 RK98_RS02960 49fd189455798427382d87bdc3f002b6 275 Gene3D G3DSA:3.40.50.1980 17 141 2.0E-28 T 28-03-2018 RK98_RS02960 49fd189455798427382d87bdc3f002b6 275 Gene3D G3DSA:3.40.50.1980 142 275 8.9E-28 T 28-03-2018 RK98_RS02115 e7f1698f2287ce5649a92d62c75c33f4 314 Gene3D G3DSA:1.10.10.10 254 303 0.026 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02115 e7f1698f2287ce5649a92d62c75c33f4 314 Pfam PF14527 WhiA LAGLIDADG-like domain 124 216 3.8E-35 T 28-03-2018 RK98_RS02115 e7f1698f2287ce5649a92d62c75c33f4 314 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 304 7.7E-135 T 28-03-2018 IPR033981 Sporulation regulator WhiA-like RK98_RS02115 e7f1698f2287ce5649a92d62c75c33f4 314 Pfam PF02650 WhiA C-terminal HTH domain 219 303 1.6E-35 T 28-03-2018 IPR023054 Sporulation regulator WhiA, C-terminal RK98_RS02115 e7f1698f2287ce5649a92d62c75c33f4 314 Gene3D G3DSA:3.10.28.10 122 202 1.4E-15 T 28-03-2018 IPR027434 Homing endonuclease GO:0004519 RK98_RS02115 e7f1698f2287ce5649a92d62c75c33f4 314 SUPERFAMILY SSF55608 118 220 4.19E-19 T 28-03-2018 IPR027434 Homing endonuclease GO:0004519 RK98_RS02115 e7f1698f2287ce5649a92d62c75c33f4 314 Gene3D G3DSA:3.10.28.10 16 101 2.7E-9 T 28-03-2018 IPR027434 Homing endonuclease GO:0004519 RK98_RS02115 e7f1698f2287ce5649a92d62c75c33f4 314 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 306 34.967 T 28-03-2018 IPR003802 Sporulation regulator WhiA GO:0043937 RK98_RS02115 e7f1698f2287ce5649a92d62c75c33f4 314 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 103 6.8E-34 T 28-03-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain RK98_RS12590 fa2f8a0e75e2056fb4efd8a1643e7698 91 SUPERFAMILY SSF54565 2 85 7.72E-32 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12590 fa2f8a0e75e2056fb4efd8a1643e7698 91 Pfam PF00886 Ribosomal protein S16 9 68 5.0E-24 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12590 fa2f8a0e75e2056fb4efd8a1643e7698 91 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 78 24.123 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12590 fa2f8a0e75e2056fb4efd8a1643e7698 91 Gene3D G3DSA:3.30.1320.10 2 86 1.6E-32 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12590 fa2f8a0e75e2056fb4efd8a1643e7698 91 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 81 4.5E-33 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS00410 5e89fb9d2d2f70c98a7fd2e9f8d1ff53 210 Gene3D G3DSA:2.40.30.20 93 190 7.7E-30 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS00410 5e89fb9d2d2f70c98a7fd2e9f8d1ff53 210 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 198 8.0E-65 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00410 5e89fb9d2d2f70c98a7fd2e9f8d1ff53 210 Gene3D G3DSA:2.40.30.20 1 88 6.3E-26 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS00410 5e89fb9d2d2f70c98a7fd2e9f8d1ff53 210 SUPERFAMILY SSF63380 1 88 5.87E-23 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RK98_RS00410 5e89fb9d2d2f70c98a7fd2e9f8d1ff53 210 SUPERFAMILY SSF63380 92 195 1.11E-29 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RK98_RS00410 5e89fb9d2d2f70c98a7fd2e9f8d1ff53 210 PIRSF PIRSF000498 1 207 4.1E-73 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00410 5e89fb9d2d2f70c98a7fd2e9f8d1ff53 210 Pfam PF00677 Lumazine binding domain 100 183 3.0E-22 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS00410 5e89fb9d2d2f70c98a7fd2e9f8d1ff53 210 Pfam PF00677 Lumazine binding domain 3 86 3.5E-20 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 RK98_RS11795 7002a98d7037b77dc51249451cdbee4c 325 SUPERFAMILY SSF52518 3 192 2.0E-64 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS11795 7002a98d7037b77dc51249451cdbee4c 325 Gene3D G3DSA:3.40.50.920 195 324 4.1E-36 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RK98_RS11795 7002a98d7037b77dc51249451cdbee4c 325 SUPERFAMILY SSF52922 188 324 8.38E-41 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RK98_RS11795 7002a98d7037b77dc51249451cdbee4c 325 SMART SM00861 4 179 6.5E-57 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RK98_RS11795 7002a98d7037b77dc51249451cdbee4c 325 Pfam PF02780 Transketolase, C-terminal domain 194 315 1.6E-39 T 28-03-2018 IPR033248 Transketolase, C-terminal domain RK98_RS11795 7002a98d7037b77dc51249451cdbee4c 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 9.7E-38 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RK98_RS11795 7002a98d7037b77dc51249451cdbee4c 325 Gene3D G3DSA:3.40.50.970 1 194 2.9E-62 T 28-03-2018 RK98_RS06950 76490ecda5655af68a93caf594911a7a 234 Gene3D G3DSA:3.30.1330.80 92 198 9.7E-39 T 28-03-2018 RK98_RS06950 76490ecda5655af68a93caf594911a7a 234 SUPERFAMILY SSF117856 3 234 5.41E-77 T 28-03-2018 RK98_RS06950 76490ecda5655af68a93caf594911a7a 234 Gene3D G3DSA:3.30.1330.80 2 91 6.0E-32 T 28-03-2018 RK98_RS06950 76490ecda5655af68a93caf594911a7a 234 PIRSF PIRSF001332 1 234 1.1E-92 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 RK98_RS06950 76490ecda5655af68a93caf594911a7a 234 Pfam PF03306 Alpha-acetolactate decarboxylase 5 222 2.2E-74 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 RK98_RS06950 76490ecda5655af68a93caf594911a7a 234 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 3 234 1.6E-73 T 28-03-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 RK98_RS01730 32fae6a727f6c0e2f3903352432d72ae 177 SUPERFAMILY SSF51283 129 177 6.34E-34 T 28-03-2018 IPR029054 dUTPase-like RK98_RS01730 32fae6a727f6c0e2f3903352432d72ae 177 SUPERFAMILY SSF51283 4 94 6.34E-34 T 28-03-2018 IPR029054 dUTPase-like RK98_RS01730 32fae6a727f6c0e2f3903352432d72ae 177 Pfam PF00692 dUTPase 135 176 4.6E-7 T 28-03-2018 IPR029054 dUTPase-like RK98_RS01730 32fae6a727f6c0e2f3903352432d72ae 177 Pfam PF00692 dUTPase 13 97 1.5E-16 T 28-03-2018 IPR029054 dUTPase-like RK98_RS01730 32fae6a727f6c0e2f3903352432d72ae 177 Gene3D G3DSA:2.70.40.10 1 177 3.4E-52 T 28-03-2018 RK98_RS01340 6daa48f8770946fa96d9f6385d0d370d 730 Pfam PF13361 UvrD-like helicase C-terminal domain 276 613 4.1E-79 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RK98_RS01340 6daa48f8770946fa96d9f6385d0d370d 730 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 271 3.5E-87 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 RK98_RS01340 6daa48f8770946fa96d9f6385d0d370d 730 SUPERFAMILY SSF52540 4 640 1.5E-181 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS01340 6daa48f8770946fa96d9f6385d0d370d 730 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 4 726 0.0 T 28-03-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 RK98_RS01340 6daa48f8770946fa96d9f6385d0d370d 730 Gene3D G3DSA:3.40.50.300 1 126 2.6E-29 T 28-03-2018 RK98_RS01340 6daa48f8770946fa96d9f6385d0d370d 730 Gene3D G3DSA:1.10.10.160 127 186 3.2E-22 T 28-03-2018 RK98_RS01340 6daa48f8770946fa96d9f6385d0d370d 730 Gene3D G3DSA:3.40.50.300 200 675 2.8E-96 T 28-03-2018 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 ProSitePatterns PS01244 Aconitase family signature 2. 388 401 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 PRINTS PR00415 Aconitase family signature 107 115 1.8E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 PRINTS PR00415 Aconitase family signature 208 221 1.8E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 PRINTS PR00415 Aconitase family signature 282 296 1.8E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 PRINTS PR00415 Aconitase family signature 132 147 1.8E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 PRINTS PR00415 Aconitase family signature 388 401 1.8E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 PRINTS PR00415 Aconitase family signature 332 343 1.8E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 PRINTS PR00415 Aconitase family signature 81 94 1.8E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 PRINTS PR00415 Aconitase family signature 118 131 1.8E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 PRINTS PR00415 Aconitase family signature 194 207 1.8E-43 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 Gene3D G3DSA:3.30.499.10 1 153 3.5E-38 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 ProSitePatterns PS00450 Aconitase family signature 1. 328 344 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 Gene3D G3DSA:3.30.499.10 313 456 1.7E-47 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 454 6.9E-210 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 SUPERFAMILY SSF53732 1 453 2.88E-160 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 Pfam PF00330 Aconitase family (aconitate hydratase) 7 446 3.0E-147 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 455 56.763 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 RK98_RS09990 a74031a8d7901911e52f6a5253364cd9 456 Gene3D G3DSA:3.40.1060.10 154 284 2.7E-43 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS02455 d6b1dcf4f329a08c36a352a45a702431 146 Pfam PF10517 Electron transfer DM13 56 145 2.2E-10 T 28-03-2018 IPR019545 DM13 domain RK98_RS12505 beaf947858cc85cfb38bfe9ee2100f2e 214 PIRSF PIRSF001461 1 214 3.1E-82 T 28-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RK98_RS12505 beaf947858cc85cfb38bfe9ee2100f2e 214 SUPERFAMILY SSF51366 1 213 2.41E-70 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RK98_RS12505 beaf947858cc85cfb38bfe9ee2100f2e 214 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RK98_RS12505 beaf947858cc85cfb38bfe9ee2100f2e 214 Gene3D G3DSA:3.20.20.70 1 214 1.2E-77 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS12505 beaf947858cc85cfb38bfe9ee2100f2e 214 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 213 9.0E-83 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RK98_RS12505 beaf947858cc85cfb38bfe9ee2100f2e 214 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RK98_RS12505 beaf947858cc85cfb38bfe9ee2100f2e 214 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 200 1.7E-75 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.3E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 1.3E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 1.3E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 1.3E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 1.3E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 1.3E-50 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 310 5.6E-110 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 Gene3D G3DSA:3.30.420.40 5 147 5.2E-42 T 28-03-2018 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 335 60.615 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 Gene3D G3DSA:3.30.420.40 148 293 2.7E-15 T 28-03-2018 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 SUPERFAMILY SSF53067 6 125 2.91E-30 T 28-03-2018 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 28-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 Pfam PF00814 Glycoprotease family 28 310 4.6E-103 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 SUPERFAMILY SSF53067 105 312 2.04E-39 T 28-03-2018 RK98_RS10045 559a84438bec40e85c16a7324cd30c9f 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 317 1.8E-132 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 RK98_RS02945 9c35e321786057a1492e38d3aaea746a 266 Gene3D G3DSA:3.40.50.1820 2 266 1.1E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS02945 9c35e321786057a1492e38d3aaea746a 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 3.7E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS02945 9c35e321786057a1492e38d3aaea746a 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 3.7E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS02945 9c35e321786057a1492e38d3aaea746a 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 3.7E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS02945 9c35e321786057a1492e38d3aaea746a 266 SUPERFAMILY SSF53474 6 259 1.99E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS02945 9c35e321786057a1492e38d3aaea746a 266 Pfam PF00561 alpha/beta hydrolase fold 22 139 5.0E-14 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS01480 1afdbb65a80fccbf906c30d224fb1f01 187 Pfam PF14595 Thioredoxin 14 138 3.8E-40 T 28-03-2018 RK98_RS01480 1afdbb65a80fccbf906c30d224fb1f01 187 SUPERFAMILY SSF52833 34 140 2.59E-8 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS01480 1afdbb65a80fccbf906c30d224fb1f01 187 Gene3D G3DSA:3.40.30.10 1 185 4.8E-11 T 28-03-2018 RK98_RS06760 8c0ec87d44192e09befd599a9b789e34 253 SUPERFAMILY SSF53474 3 250 2.22E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS06760 8c0ec87d44192e09befd599a9b789e34 253 Gene3D G3DSA:3.40.50.1820 3 253 1.4E-29 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS06760 8c0ec87d44192e09befd599a9b789e34 253 Pfam PF00756 Putative esterase 12 246 4.5E-15 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 Gene3D G3DSA:1.10.10.10 4 67 2.8E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 Pfam PF01316 Arginine repressor, DNA binding domain 3 70 3.0E-27 T 28-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 TIGRFAM TIGR01529 argR_whole: arginine repressor 7 150 9.8E-51 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 PRINTS PR01467 Bacterial arginine repressor signature 38 53 6.1E-25 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 PRINTS PR01467 Bacterial arginine repressor signature 89 102 6.1E-25 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 PRINTS PR01467 Bacterial arginine repressor signature 22 35 6.1E-25 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 PRINTS PR01467 Bacterial arginine repressor signature 119 134 6.1E-25 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 Hamap MF_00173 Arginine repressor [argR]. 1 150 68.006 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 SUPERFAMILY SSF55252 80 150 5.76E-23 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 88 150 7.0E-18 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 Gene3D G3DSA:3.30.1360.40 75 146 1.7E-28 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 SUPERFAMILY SSF46785 4 78 2.51E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14135 82c623f3658c6b0d7afe7f0952f2101f 150 Pfam PF02863 Arginine repressor, C-terminal domain 82 146 1.6E-26 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RK98_RS02695 4a1fd1686844a507e7c9175ecd0c8350 253 Gene3D G3DSA:3.40.50.300 1 232 3.3E-62 T 28-03-2018 RK98_RS02695 4a1fd1686844a507e7c9175ecd0c8350 253 Pfam PF00005 ABC transporter 23 171 1.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02695 4a1fd1686844a507e7c9175ecd0c8350 253 SUPERFAMILY SSF52540 3 224 2.87E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02695 4a1fd1686844a507e7c9175ecd0c8350 253 SMART SM00382 32 220 1.6E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 Gene3D G3DSA:2.40.340.10 335 410 2.2E-13 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 Gene3D G3DSA:3.40.980.10 156 334 7.9E-51 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 Pfam PF00994 Probable molybdopterin binding domain 186 324 6.5E-26 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 Gene3D G3DSA:2.170.190.11 51 147 3.7E-24 T 28-03-2018 RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 SMART SM00852 186 324 9.1E-35 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 SUPERFAMILY SSF63867 333 408 2.09E-16 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 Pfam PF03454 MoeA C-terminal region (domain IV) 337 407 4.4E-16 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 SUPERFAMILY SSF53218 183 329 7.2E-40 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 173 2.0E-40 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 SUPERFAMILY SSF63882 8 181 7.19E-54 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RK98_RS08775 caaa5ea2f1685ab813765f2b55e17a47 419 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 183 320 6.5E-32 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS06185 b0237565612940ba64e3708a46e9a75f 418 Gene3D G3DSA:3.40.1350.10 268 407 1.4E-4 T 28-03-2018 RK98_RS06185 b0237565612940ba64e3708a46e9a75f 418 Pfam PF12102 Domain of unknown function (DUF3578) 7 201 1.5E-52 T 28-03-2018 IPR021961 Protein of unknown function DUF3578 RK98_RS06185 b0237565612940ba64e3708a46e9a75f 418 Pfam PF13020 Domain of unknown function (DUF3883) 278 385 2.3E-17 T 28-03-2018 IPR024975 Domain of unknown function DUF3883 RK98_RS14330 768cb94cac51d9649afbc7adaaecf2e2 366 Gene3D G3DSA:3.40.1390.30 1 123 3.3E-35 T 28-03-2018 RK98_RS14330 768cb94cac51d9649afbc7adaaecf2e2 366 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 5 345 1.6E-80 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RK98_RS14330 768cb94cac51d9649afbc7adaaecf2e2 366 SUPERFAMILY SSF102705 1 365 8.63E-118 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RK98_RS14330 768cb94cac51d9649afbc7adaaecf2e2 366 Gene3D G3DSA:3.30.70.120 128 233 4.5E-31 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RK98_RS14330 768cb94cac51d9649afbc7adaaecf2e2 366 PIRSF PIRSF037489 1 366 1.8E-135 T 28-03-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria RK98_RS14330 768cb94cac51d9649afbc7adaaecf2e2 366 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 362 6.0E-70 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 RK98_RS14330 768cb94cac51d9649afbc7adaaecf2e2 366 Gene3D G3DSA:3.40.1390.30 241 346 4.9E-10 T 28-03-2018 RK98_RS14555 05841f098833a34860e14ad97cb5c75e 250 Gene3D G3DSA:3.20.20.370 2 249 8.0E-105 T 28-03-2018 RK98_RS14555 05841f098833a34860e14ad97cb5c75e 250 Pfam PF03746 LamB/YcsF family 3 240 3.3E-101 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RK98_RS14555 05841f098833a34860e14ad97cb5c75e 250 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 245 45.688 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF RK98_RS14555 05841f098833a34860e14ad97cb5c75e 250 SUPERFAMILY SSF88713 1 249 4.22E-100 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RK98_RS09945 d390c7364f822193069201551bf9ac1e 151 Hamap MF_00745 Protein SprT-like. 4 147 39.609 T 28-03-2018 IPR023524 Uncharacterised protein family SprT-like RK98_RS09945 d390c7364f822193069201551bf9ac1e 151 SMART SM00731 4 147 2.0E-64 T 28-03-2018 IPR006640 SprT-like RK98_RS09945 d390c7364f822193069201551bf9ac1e 151 Pfam PF17283 SprT-like zinc ribbon domain 112 148 1.7E-10 T 28-03-2018 IPR035240 SprT-like, zinc ribbon domain RK98_RS09945 d390c7364f822193069201551bf9ac1e 151 Pfam PF10263 SprT-like family 7 97 2.0E-15 T 28-03-2018 IPR006640 SprT-like RK98_RS14040 6dd205ef05a7a48022f1746baa2f61ef 271 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 98 6.4E-16 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal RK98_RS14040 6dd205ef05a7a48022f1746baa2f61ef 271 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 265 21.802 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 RK98_RS14040 6dd205ef05a7a48022f1746baa2f61ef 271 PIRSF PIRSF000193 1 268 5.0E-89 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 RK98_RS14040 6dd205ef05a7a48022f1746baa2f61ef 271 Gene3D G3DSA:1.10.3730.10 159 269 3.2E-28 T 28-03-2018 RK98_RS14040 6dd205ef05a7a48022f1746baa2f61ef 271 SUPERFAMILY SSF48179 160 267 4.93E-27 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS14040 6dd205ef05a7a48022f1746baa2f61ef 271 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 161 265 4.7E-27 T 28-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 RK98_RS14040 6dd205ef05a7a48022f1746baa2f61ef 271 SUPERFAMILY SSF51735 1 159 4.16E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS14040 6dd205ef05a7a48022f1746baa2f61ef 271 Gene3D G3DSA:3.40.50.720 1 158 5.7E-23 T 28-03-2018 RK98_RS14040 6dd205ef05a7a48022f1746baa2f61ef 271 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 265 6.3E-86 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 RK98_RS13725 328e0ef3ae79bb8bea45d9abe6b61be3 114 Gene3D G3DSA:1.20.5.170 16 76 1.3E-4 T 28-03-2018 RK98_RS13725 328e0ef3ae79bb8bea45d9abe6b61be3 114 Pfam PF05103 DivIVA protein 8 70 1.3E-11 T 28-03-2018 IPR007793 DivIVA family RK98_RS13725 328e0ef3ae79bb8bea45d9abe6b61be3 114 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 42 8.6E-15 T 28-03-2018 IPR019933 DivIVA domain RK98_RS13725 328e0ef3ae79bb8bea45d9abe6b61be3 114 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 1 114 22.875 T 28-03-2018 IPR011229 Cell cycle protein GpsB RK98_RS13725 328e0ef3ae79bb8bea45d9abe6b61be3 114 PIRSF PIRSF029938 1 114 3.4E-40 T 28-03-2018 IPR011229 Cell cycle protein GpsB RK98_RS07275 c6da31716559c6fd6f2c4cc173a358c4 579 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 419 438 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RK98_RS07275 c6da31716559c6fd6f2c4cc173a358c4 579 Gene3D G3DSA:3.40.50.970 1 191 4.9E-42 T 28-03-2018 RK98_RS07275 c6da31716559c6fd6f2c4cc173a358c4 579 Gene3D G3DSA:3.40.50.1220 192 345 4.4E-33 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS07275 c6da31716559c6fd6f2c4cc173a358c4 579 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 382 528 3.4E-39 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RK98_RS07275 c6da31716559c6fd6f2c4cc173a358c4 579 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 172 6.8E-39 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RK98_RS07275 c6da31716559c6fd6f2c4cc173a358c4 579 Gene3D G3DSA:3.40.50.970 346 543 9.7E-39 T 28-03-2018 RK98_RS07275 c6da31716559c6fd6f2c4cc173a358c4 579 SUPERFAMILY SSF52518 2 171 8.42E-43 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS07275 c6da31716559c6fd6f2c4cc173a358c4 579 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 193 322 8.6E-34 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RK98_RS07275 c6da31716559c6fd6f2c4cc173a358c4 579 SUPERFAMILY SSF52518 359 539 2.58E-59 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS07275 c6da31716559c6fd6f2c4cc173a358c4 579 SUPERFAMILY SSF52467 185 353 7.91E-45 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS14485 11b7d42a3db60d5264feabf6e54b9f16 238 Gene3D G3DSA:2.20.25.110 135 197 6.7E-17 T 28-03-2018 RK98_RS14485 11b7d42a3db60d5264feabf6e54b9f16 238 SUPERFAMILY SSF53335 4 238 7.08E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS14485 11b7d42a3db60d5264feabf6e54b9f16 238 Gene3D G3DSA:3.40.50.150 2 132 2.4E-19 T 28-03-2018 RK98_RS14485 11b7d42a3db60d5264feabf6e54b9f16 238 Pfam PF13649 Methyltransferase domain 37 126 3.5E-15 T 28-03-2018 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 ProSitePatterns PS00786 5'-nucleotidase signature 2. 216 227 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 738 770 1.1E-5 T 28-03-2018 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 SUPERFAMILY SSF55816 439 636 3.4E-45 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 PIRSF PIRSF033095 5 770 0.0 T 28-03-2018 IPR014579 Predicted 5'-nucleotidase, SA0022 type RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 Gene3D G3DSA:3.90.780.10 436 644 7.5E-49 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 Gene3D G3DSA:3.60.21.10 141 432 6.2E-64 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 SUPERFAMILY SSF56300 145 429 4.94E-69 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 Pfam PF02872 5'-nucleotidase, C-terminal domain 444 609 4.5E-41 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 Pfam PF00149 Calcineurin-like phosphoesterase 149 359 9.0E-11 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 PRINTS PR01607 Apyrase family signature 495 518 1.5E-19 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 PRINTS PR01607 Apyrase family signature 147 165 1.5E-19 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 PRINTS PR01607 Apyrase family signature 342 365 1.5E-19 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 PRINTS PR01607 Apyrase family signature 310 327 1.5E-19 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS06195 f50a755fee25fba9ff65d333c0bba1e5 772 PRINTS PR01607 Apyrase family signature 584 603 1.5E-19 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS03650 9fe1bcf9ffa5a22a177963bf2fef1582 282 PIRSF PIRSF010376 1 281 2.6E-91 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RK98_RS03650 9fe1bcf9ffa5a22a177963bf2fef1582 282 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 278 33.826 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RK98_RS03650 9fe1bcf9ffa5a22a177963bf2fef1582 282 Pfam PF08544 GHMP kinases C terminal 198 269 3.5E-11 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03650 9fe1bcf9ffa5a22a177963bf2fef1582 282 Pfam PF00288 GHMP kinases N terminal domain 86 142 2.7E-11 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 RK98_RS03650 9fe1bcf9ffa5a22a177963bf2fef1582 282 Gene3D G3DSA:3.30.230.10 3 158 1.0E-45 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS03650 9fe1bcf9ffa5a22a177963bf2fef1582 282 SUPERFAMILY SSF55060 160 280 5.14E-29 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03650 9fe1bcf9ffa5a22a177963bf2fef1582 282 Gene3D G3DSA:3.30.70.890 160 280 2.5E-24 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03650 9fe1bcf9ffa5a22a177963bf2fef1582 282 SUPERFAMILY SSF54211 1 156 3.04E-43 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS03650 9fe1bcf9ffa5a22a177963bf2fef1582 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 282 3.4E-89 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 RK98_RS08460 22ebf7b5700ecdcaa339b61cb33d970d 311 PIRSF PIRSF036979 20 311 9.9E-32 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 RK98_RS08460 22ebf7b5700ecdcaa339b61cb33d970d 311 Gene3D G3DSA:3.40.800.10 1 311 2.4E-70 T 28-03-2018 RK98_RS08460 22ebf7b5700ecdcaa339b61cb33d970d 311 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 311 38.353 T 28-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 RK98_RS08460 22ebf7b5700ecdcaa339b61cb33d970d 311 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 311 1.8E-133 T 28-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 RK98_RS08460 22ebf7b5700ecdcaa339b61cb33d970d 311 SUPERFAMILY SSF52768 9 310 9.18E-71 T 28-03-2018 RK98_RS08460 22ebf7b5700ecdcaa339b61cb33d970d 311 Pfam PF00491 Arginase family 46 309 3.8E-48 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 RK98_RS00465 5adc46ffbbb24e801cd6a1c81ca2c24f 237 Gene3D G3DSA:3.20.20.70 6 233 1.3E-48 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS00465 5adc46ffbbb24e801cd6a1c81ca2c24f 237 SUPERFAMILY SSF51569 7 231 4.76E-48 T 28-03-2018 RK98_RS00465 5adc46ffbbb24e801cd6a1c81ca2c24f 237 TIGRFAM TIGR02134 transald_staph: transaldolase 1 237 1.4E-132 T 28-03-2018 IPR011861 Transaldolase, Staphylococcus-type RK98_RS00465 5adc46ffbbb24e801cd6a1c81ca2c24f 237 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 8 212 1.1E-36 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 RK98_RS06400 789745f7b576afba1d8065a54c852e71 170 Pfam PF03729 Short repeat of unknown function (DUF308) 14 86 1.7E-12 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane RK98_RS06400 789745f7b576afba1d8065a54c852e71 170 Pfam PF03729 Short repeat of unknown function (DUF308) 73 140 2.4E-6 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane RK98_RS06400 789745f7b576afba1d8065a54c852e71 170 Pfam PF03729 Short repeat of unknown function (DUF308) 129 169 0.0032 T 28-03-2018 IPR005325 Protein of unknown function DUF308, membrane RK98_RS05525 4fa1fcf087465aaa38fb955fb96fa831 369 Gene3D G3DSA:3.40.50.720 2 226 4.4E-18 T 28-03-2018 RK98_RS05525 4fa1fcf087465aaa38fb955fb96fa831 369 SUPERFAMILY SSF51735 2 218 5.96E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05525 4fa1fcf087465aaa38fb955fb96fa831 369 SUPERFAMILY SSF51182 241 365 8.37E-23 T 28-03-2018 IPR011051 RmlC-like cupin domain RK98_RS05525 4fa1fcf087465aaa38fb955fb96fa831 369 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 185 4.7E-15 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 RK98_RS05525 4fa1fcf087465aaa38fb955fb96fa831 369 Gene3D G3DSA:2.60.120.10 248 368 2.9E-24 T 28-03-2018 IPR014710 RmlC-like jelly roll fold RK98_RS10020 70dbf4913809e5d3523fe2819d953d06 562 SUPERFAMILY SSF52016 376 556 5.96E-60 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RK98_RS10020 70dbf4913809e5d3523fe2819d953d06 562 Pfam PF00920 Dehydratase family 33 552 2.0E-221 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RK98_RS10020 70dbf4913809e5d3523fe2819d953d06 562 SUPERFAMILY SSF143975 1 375 1.7E-133 T 28-03-2018 RK98_RS10020 70dbf4913809e5d3523fe2819d953d06 562 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RK98_RS10020 70dbf4913809e5d3523fe2819d953d06 562 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 121 131 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RK98_RS10020 70dbf4913809e5d3523fe2819d953d06 562 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 556 45.705 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RK98_RS10020 70dbf4913809e5d3523fe2819d953d06 562 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 556 1.8E-236 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 RK98_RS10020 70dbf4913809e5d3523fe2819d953d06 562 Gene3D G3DSA:3.40.50.2300 36 259 2.5E-4 T 28-03-2018 RK98_RS02030 427169cac9f6171dd3e6e9d1ceb48507 154 Gene3D G3DSA:2.40.280.10 10 128 2.3E-51 T 28-03-2018 IPR023620 Small protein B RK98_RS02030 427169cac9f6171dd3e6e9d1ceb48507 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 154 73.279 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 RK98_RS02030 427169cac9f6171dd3e6e9d1ceb48507 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 1.7E-58 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 RK98_RS02030 427169cac9f6171dd3e6e9d1ceb48507 154 SUPERFAMILY SSF74982 4 133 1.11E-52 T 28-03-2018 IPR023620 Small protein B RK98_RS02030 427169cac9f6171dd3e6e9d1ceb48507 154 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 28-03-2018 IPR020081 SsrA-binding protein, conserved site RK98_RS02030 427169cac9f6171dd3e6e9d1ceb48507 154 Pfam PF01668 SmpB protein 11 151 1.3E-61 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 RK98_RS02030 427169cac9f6171dd3e6e9d1ceb48507 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 133 9.0E-68 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 RK98_RS11295 ab9de3ef2de848b270a8c7587410f684 268 Gene3D G3DSA:3.40.30.10 10 198 2.6E-13 T 28-03-2018 RK98_RS11295 ab9de3ef2de848b270a8c7587410f684 268 SUPERFAMILY SSF52833 24 199 6.87E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS11295 ab9de3ef2de848b270a8c7587410f684 268 Pfam PF13743 Thioredoxin 27 189 1.2E-42 T 28-03-2018 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 119 1.2E-19 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 142 154 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 365 37.717 T 28-03-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 141 356 1.3E-41 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 Gene3D G3DSA:3.40.50.720 76 186 9.2E-18 T 28-03-2018 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 Gene3D G3DSA:3.40.50.720 1 75 8.3E-9 T 28-03-2018 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 2.1E-11 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 PRINTS PR00084 Mannitol dehydrogenase signature 160 175 2.1E-11 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 PRINTS PR00084 Mannitol dehydrogenase signature 142 155 2.1E-11 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 Gene3D G3DSA:1.10.1040.10 191 367 1.1E-32 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 SUPERFAMILY SSF51735 1 182 5.23E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS09425 c94336fd5370bcebf401b764908dbd6b 368 SUPERFAMILY SSF48179 192 367 1.73E-36 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS07820 ccd9e257dd718810622e8056d5aba1fc 311 SUPERFAMILY SSF48179 179 304 4.76E-30 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS07820 ccd9e257dd718810622e8056d5aba1fc 311 Gene3D G3DSA:3.40.50.720 1 178 9.6E-27 T 28-03-2018 RK98_RS07820 ccd9e257dd718810622e8056d5aba1fc 311 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 180 304 2.9E-32 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 RK98_RS07820 ccd9e257dd718810622e8056d5aba1fc 311 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 307 3.0E-91 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 RK98_RS07820 ccd9e257dd718810622e8056d5aba1fc 311 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 152 3.4E-38 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 RK98_RS07820 ccd9e257dd718810622e8056d5aba1fc 311 SUPERFAMILY SSF51735 1 164 7.88E-18 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS07820 ccd9e257dd718810622e8056d5aba1fc 311 Gene3D G3DSA:1.10.1040.10 179 311 1.5E-29 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RK98_RS07085 03655f84d8e24a86a548f5649ba4a7fc 273 Gene3D G3DSA:3.40.50.720 1 232 3.5E-20 T 28-03-2018 RK98_RS07085 03655f84d8e24a86a548f5649ba4a7fc 273 Pfam PF05368 NmrA-like family 4 223 2.0E-39 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 RK98_RS07085 03655f84d8e24a86a548f5649ba4a7fc 273 SUPERFAMILY SSF51735 3 226 2.56E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 11 644 92.944 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 ProSitePatterns PS00177 DNA topoisomerase II signature. 433 441 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 SMART SM00387 39 183 5.6E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 Pfam PF01751 Toprim domain 430 541 5.5E-17 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR01159 DNA gyrase subunit B signature 189 204 1.2E-75 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR01159 DNA gyrase subunit B signature 231 253 1.2E-75 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR01159 DNA gyrase subunit B signature 598 610 1.2E-75 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR01159 DNA gyrase subunit B signature 371 385 1.2E-75 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR01159 DNA gyrase subunit B signature 385 405 1.2E-75 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR01159 DNA gyrase subunit B signature 614 630 1.2E-75 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR01159 DNA gyrase subunit B signature 204 217 1.2E-75 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR01159 DNA gyrase subunit B signature 14 24 1.2E-75 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR01159 DNA gyrase subunit B signature 323 339 1.2E-75 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR01159 DNA gyrase subunit B signature 481 490 1.2E-75 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR00418 DNA topoisomerase II family signature 121 135 3.0E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR00418 DNA topoisomerase II family signature 78 91 3.0E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR00418 DNA topoisomerase II family signature 577 593 3.0E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR00418 DNA topoisomerase II family signature 431 445 3.0E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR00418 DNA topoisomerase II family signature 279 292 3.0E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR00418 DNA topoisomerase II family signature 515 532 3.0E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR00418 DNA topoisomerase II family signature 43 58 3.0E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR00418 DNA topoisomerase II family signature 497 513 3.0E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 PRINTS PR00418 DNA topoisomerase II family signature 535 547 3.0E-70 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 574 634 1.2E-29 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 SUPERFAMILY SSF55874 14 220 5.11E-71 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 Pfam PF00204 DNA gyrase B 232 401 1.3E-62 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 Gene3D G3DSA:3.30.565.10 24 235 7.7E-74 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 Gene3D G3DSA:3.30.230.10 236 403 4.7E-63 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 14 640 8.5E-300 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 SUPERFAMILY SSF54211 232 402 5.88E-59 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 Gene3D G3DSA:3.40.50.670 410 641 3.4E-103 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 SMART SM00433 43 638 0.0 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 SUPERFAMILY SSF56719 405 636 5.49E-92 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RK98_RS06305 ea22c8a219d5484e4fb35bb0f675197e 644 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 180 1.1E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS11275 ce28fca75ea3536c82f6541514f0da66 131 Gene3D G3DSA:3.40.30.10 1 131 1.1E-39 T 28-03-2018 RK98_RS11275 ce28fca75ea3536c82f6541514f0da66 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 37.186 T 28-03-2018 IPR023731 Regulatory protein Spx GO:0045892 RK98_RS11275 ce28fca75ea3536c82f6541514f0da66 131 SUPERFAMILY SSF52833 1 129 1.89E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS11275 ce28fca75ea3536c82f6541514f0da66 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 1.1E-36 T 28-03-2018 IPR006504 Transcriptional regulator Spx/MgsR RK98_RS11275 ce28fca75ea3536c82f6541514f0da66 131 Pfam PF03960 ArsC family 6 113 1.3E-23 T 28-03-2018 IPR006660 Arsenate reductase-like RK98_RS14015 21934a53e6da35d6efd0ae036cf6e024 149 Gene3D G3DSA:1.10.10.10 1 87 7.6E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14015 21934a53e6da35d6efd0ae036cf6e024 149 Pfam PF01475 Ferric uptake regulator family 15 136 1.6E-38 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RK98_RS14015 21934a53e6da35d6efd0ae036cf6e024 149 SUPERFAMILY SSF46785 7 141 2.49E-38 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS05910 1400f3171c6e8c681b55ce9ce5e137fe 581 TIGRFAM TIGR04141 TIGR04141: sporadically distributed protein, TIGR04141 family 24 515 2.9E-26 T 28-03-2018 IPR026487 Sporadically distributed protein CHP04141 RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 SUPERFAMILY SSF52518 29 206 2.31E-59 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 36 195 6.3E-55 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 SUPERFAMILY SSF52467 218 384 1.57E-57 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 417 565 6.7E-51 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 Gene3D G3DSA:3.40.50.1220 228 376 6.6E-47 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 454 473 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 SUPERFAMILY SSF52518 395 586 6.25E-70 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 224 359 2.6E-42 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 Gene3D G3DSA:3.40.50.970 28 227 9.5E-60 T 28-03-2018 RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 36 586 7.6E-225 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 RK98_RS10015 bf1dce6bf0268d7beba835150e123289 589 Gene3D G3DSA:3.40.50.970 377 585 2.3E-54 T 28-03-2018 RK98_RS13755 13f7f1402956166ad8f48c3d97ec2411 727 Pfam PF00912 Transglycosylase 82 257 7.5E-59 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 RK98_RS13755 13f7f1402956166ad8f48c3d97ec2411 727 SUPERFAMILY SSF53955 72 282 6.47E-66 T 28-03-2018 IPR023346 Lysozyme-like domain RK98_RS13755 13f7f1402956166ad8f48c3d97ec2411 727 Gene3D G3DSA:1.10.3810.10 74 274 2.4E-70 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 RK98_RS13755 13f7f1402956166ad8f48c3d97ec2411 727 Pfam PF00905 Penicillin binding protein transpeptidase domain 361 631 9.7E-28 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RK98_RS13755 13f7f1402956166ad8f48c3d97ec2411 727 SUPERFAMILY SSF56601 299 672 5.22E-84 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like RK98_RS13755 13f7f1402956166ad8f48c3d97ec2411 727 Gene3D G3DSA:3.40.710.10 286 720 1.3E-69 T 28-03-2018 RK98_RS01875 cdc2c8567078c0c2eb49e59334e5d024 345 Pfam PF00589 Phage integrase family 167 327 6.5E-22 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS01875 cdc2c8567078c0c2eb49e59334e5d024 345 Gene3D G3DSA:1.10.150.130 50 163 1.1E-19 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS01875 cdc2c8567078c0c2eb49e59334e5d024 345 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 55 111 2.5E-10 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RK98_RS01875 cdc2c8567078c0c2eb49e59334e5d024 345 Gene3D G3DSA:1.10.443.10 164 340 2.4E-29 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS01875 cdc2c8567078c0c2eb49e59334e5d024 345 SUPERFAMILY SSF56349 54 332 2.09E-58 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 293 5.9E-23 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 Gene3D G3DSA:3.40.190.10 1 104 5.8E-39 T 28-03-2018 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 5.2E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 5.2E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 5.2E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 5.2E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 5.2E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 2.9E-106 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 SUPERFAMILY SSF53850 2 216 2.61E-77 T 28-03-2018 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 Gene3D G3DSA:3.30.160.40 220 304 1.2E-19 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.322 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 Gene3D G3DSA:3.40.190.10 105 198 4.5E-34 T 28-03-2018 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 28-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 6.0E-74 T 28-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 SUPERFAMILY SSF54782 220 306 1.7E-21 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14910 5c206e64b88aa9172a875294df16716f 308 PIRSF PIRSF001438 1 308 2.3E-115 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS03205 82e13e6cb8cb1aa4132f391f46c7b629 490 Pfam PF00534 Glycosyl transferases group 1 314 469 5.7E-38 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 RK98_RS03205 82e13e6cb8cb1aa4132f391f46c7b629 490 Gene3D G3DSA:3.40.50.2000 302 476 1.3E-35 T 28-03-2018 RK98_RS03205 82e13e6cb8cb1aa4132f391f46c7b629 490 SUPERFAMILY SSF53756 232 489 3.77E-51 T 28-03-2018 RK98_RS14080 539301156fe39bc76dadac39fad92058 405 Gene3D G3DSA:1.20.1250.20 208 399 2.9E-15 T 28-03-2018 RK98_RS14080 539301156fe39bc76dadac39fad92058 405 Pfam PF07690 Major Facilitator Superfamily 16 358 1.1E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS14080 539301156fe39bc76dadac39fad92058 405 Gene3D G3DSA:1.20.1250.20 1 203 7.8E-22 T 28-03-2018 RK98_RS14080 539301156fe39bc76dadac39fad92058 405 SUPERFAMILY SSF103473 9 396 1.96E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS12560 073307b222abd45849b6e4582c113db0 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site RK98_RS12560 073307b222abd45849b6e4582c113db0 77 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 22.556 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 RK98_RS12560 073307b222abd45849b6e4582c113db0 77 Gene3D G3DSA:1.10.1200.10 1 77 1.6E-25 T 28-03-2018 RK98_RS12560 073307b222abd45849b6e4582c113db0 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 74 6.0E-11 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 RK98_RS12560 073307b222abd45849b6e4582c113db0 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 4 74 1.8E-32 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 RK98_RS12560 073307b222abd45849b6e4582c113db0 77 SUPERFAMILY SSF47336 4 75 4.58E-23 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain RK98_RS12560 073307b222abd45849b6e4582c113db0 77 Pfam PF00550 Phosphopantetheine attachment site 5 72 3.2E-16 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 Gene3D G3DSA:3.40.50.720 4 89 0.0012 T 28-03-2018 RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 Gene3D G3DSA:3.40.1190.10 90 295 2.3E-37 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 Pfam PF08245 Mur ligase middle domain 106 274 3.4E-24 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 SUPERFAMILY SSF53623 87 293 7.59E-57 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 SUPERFAMILY SSF53244 294 430 2.38E-35 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 Pfam PF01225 Mur ligase family, catalytic domain 3 101 1.1E-22 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 3 425 5.4E-125 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 377 7.2E-20 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 433 34.873 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 SUPERFAMILY SSF51984 1 89 2.16E-20 T 28-03-2018 RK98_RS00270 9b45d00512ad5d28fec550eeb9b1362b 437 Gene3D G3DSA:3.90.190.20 296 435 7.8E-24 T 28-03-2018 RK98_RS10345 5e96984ce8f51e2ad767908201a977f5 189 SUPERFAMILY SSF54001 40 155 3.14E-10 T 28-03-2018 RK98_RS10345 5e96984ce8f51e2ad767908201a977f5 189 Gene3D G3DSA:3.90.1720.10 37 188 2.0E-10 T 28-03-2018 RK98_RS08285 722b3a139484b1f24c5d5b2872b92fe3 492 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 8 487 1.8E-214 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 RK98_RS08285 722b3a139484b1f24c5d5b2872b92fe3 492 SUPERFAMILY SSF51905 7 311 3.63E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08285 722b3a139484b1f24c5d5b2872b92fe3 492 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 4 491 54.105 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 RK98_RS08285 722b3a139484b1f24c5d5b2872b92fe3 492 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 7 490 6.6E-232 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 RK98_RS08285 722b3a139484b1f24c5d5b2872b92fe3 492 Gene3D G3DSA:3.50.50.60 1 437 4.6E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS10645 5d59b575a4f2059a9e88f23a70ec3db7 82 Pfam PF06260 Protein of unknown function (DUF1024) 1 82 2.4E-52 T 28-03-2018 IPR009368 Protein of unknown function DUF1024 RK98_RS05025 976782aad376f21e24833c559661d8ba 347 Gene3D G3DSA:3.40.50.10730 148 308 1.4E-25 T 28-03-2018 RK98_RS05025 976782aad376f21e24833c559661d8ba 347 SUPERFAMILY SSF51735 139 287 1.39E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05025 976782aad376f21e24833c559661d8ba 347 Gene3D G3DSA:3.90.180.10 1 147 2.2E-43 T 28-03-2018 RK98_RS05025 976782aad376f21e24833c559661d8ba 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 131 1.4E-29 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RK98_RS05025 976782aad376f21e24833c559661d8ba 347 Pfam PF00107 Zinc-binding dehydrogenase 172 293 2.9E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RK98_RS05025 976782aad376f21e24833c559661d8ba 347 SMART SM00829 8 344 0.0012 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RK98_RS05025 976782aad376f21e24833c559661d8ba 347 SUPERFAMILY SSF50129 2 170 6.99E-50 T 28-03-2018 IPR011032 GroES-like RK98_RS05025 976782aad376f21e24833c559661d8ba 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 RK98_RS07750 93db70faf28c64bf73494f8e232f99e7 220 Gene3D G3DSA:3.40.50.300 1 219 3.4E-57 T 28-03-2018 RK98_RS07750 93db70faf28c64bf73494f8e232f99e7 220 SMART SM00382 27 209 5.0E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS07750 93db70faf28c64bf73494f8e232f99e7 220 Pfam PF00005 ABC transporter 18 161 1.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS07750 93db70faf28c64bf73494f8e232f99e7 220 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS07750 93db70faf28c64bf73494f8e232f99e7 220 SUPERFAMILY SSF52540 2 212 2.97E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 Gene3D G3DSA:3.50.50.60 1 128 3.6E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 293 1.2E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 SUPERFAMILY SSF51905 1 304 1.45E-59 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 Gene3D G3DSA:3.50.50.60 129 236 1.3E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 2.3E-39 T 28-03-2018 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.3E-39 T 28-03-2018 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.3E-39 T 28-03-2018 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 2.3E-39 T 28-03-2018 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 2.3E-39 T 28-03-2018 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 8.9E-72 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 285 8.9E-72 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 8.9E-72 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 8.9E-72 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 8.9E-72 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 8.9E-72 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 8.9E-72 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 8.9E-72 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 8.9E-72 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 304 3.9E-120 T 28-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 RK98_RS02135 ee525c9fc47f747cb7f9369d16624e24 311 Gene3D G3DSA:3.50.50.60 237 311 9.0E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS02835 b790af1281f28e7517eaf5f17f15ff02 214 SMART SM00899 142 214 4.5E-4 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RK98_RS02835 b790af1281f28e7517eaf5f17f15ff02 214 Gene3D G3DSA:1.10.60.10 73 127 5.4E-23 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RK98_RS02835 b790af1281f28e7517eaf5f17f15ff02 214 Gene3D G3DSA:1.10.10.10 2 70 1.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02835 b790af1281f28e7517eaf5f17f15ff02 214 SUPERFAMILY SSF47979 63 137 1.18E-24 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RK98_RS02835 b790af1281f28e7517eaf5f17f15ff02 214 SMART SM00529 24 123 1.1E-44 T 28-03-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 RK98_RS02835 b790af1281f28e7517eaf5f17f15ff02 214 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 63 131 1.7E-26 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 RK98_RS02835 b790af1281f28e7517eaf5f17f15ff02 214 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 1 60 3.1E-24 T 28-03-2018 IPR022687 DTXR-type HTH domain GO:0003677 RK98_RS02835 b790af1281f28e7517eaf5f17f15ff02 214 SUPERFAMILY SSF46785 2 62 9.48E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02835 b790af1281f28e7517eaf5f17f15ff02 214 Gene3D G3DSA:2.30.30.90 145 214 1.4E-7 T 28-03-2018 RK98_RS02835 b790af1281f28e7517eaf5f17f15ff02 214 Pfam PF04023 FeoA domain 146 212 3.8E-7 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 SUPERFAMILY SSF55874 415 581 4.98E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 SMART SM00304 197 249 8.4E-17 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 SMART SM00387 471 583 8.9E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 Pfam PF00672 HAMP domain 198 245 7.3E-16 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 Gene3D G3DSA:1.10.287.130 365 420 1.4E-16 T 28-03-2018 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 Gene3D G3DSA:3.30.565.10 421 582 3.4E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 543 561 8.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 508 522 8.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 536 8.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 PRINTS PR00344 Bacterial sensor protein C-terminal signature 567 580 8.6E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 SUPERFAMILY SSF47384 347 426 3.34E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 472 582 1.3E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 SMART SM00388 359 426 4.3E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 SUPERFAMILY SSF158472 198 248 1.24E-11 T 28-03-2018 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 Gene3D G3DSA:3.30.450.20 48 364 7.6E-8 T 28-03-2018 RK98_RS13980 a2c67bea1ef51dc275ce0d977344b781 583 Pfam PF00512 His Kinase A (phospho-acceptor) domain 359 425 5.2E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS08550 6516327085c0d7a3cab5175f616acf92 459 PIRSF PIRSF006060 1 458 7.4E-71 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS08550 6516327085c0d7a3cab5175f616acf92 459 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RK98_RS08550 6516327085c0d7a3cab5175f616acf92 459 Pfam PF00324 Amino acid permease 15 436 2.2E-102 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RK98_RS13435 1f453a0a66e398de469999846a453704 300 Gene3D G3DSA:2.40.50.140 81 154 0.23 T 28-03-2018 RK98_RS13435 1f453a0a66e398de469999846a453704 300 PIRSF PIRSF012524 4 290 2.3E-115 T 28-03-2018 IPR014464 Conserved virulence factor B RK98_RS13435 1f453a0a66e398de469999846a453704 300 Pfam PF13509 S1 domain 8 69 2.2E-6 T 28-03-2018 RK98_RS13435 1f453a0a66e398de469999846a453704 300 Gene3D G3DSA:1.10.10.10 229 288 2.3E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13435 1f453a0a66e398de469999846a453704 300 Gene3D G3DSA:2.40.50.140 159 226 0.0036 T 28-03-2018 RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 SMART SM00448 1 115 6.0E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 SUPERFAMILY SSF46894 143 215 1.09E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 SUPERFAMILY SSF52172 2 126 3.27E-29 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 2.4E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 2.4E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 2.4E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 SMART SM00421 152 209 1.5E-25 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 Gene3D G3DSA:3.40.50.2300 1 126 3.7E-28 T 28-03-2018 RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 Gene3D G3DSA:1.10.10.10 127 217 2.7E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 Pfam PF00072 Response regulator receiver domain 3 115 6.5E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS08145 dde6d8f55e621bf00bf9d3e8f48eae21 217 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 209 6.1E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS03590 b2e45645dd1f1095039e7897a1fe6555 397 SUPERFAMILY SSF101386 234 336 2.06E-20 T 28-03-2018 RK98_RS03590 b2e45645dd1f1095039e7897a1fe6555 397 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 258 331 2.0E-26 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core RK98_RS03590 b2e45645dd1f1095039e7897a1fe6555 397 PIRSF PIRSF002845 358 397 4.2 T 28-03-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted RK98_RS03590 b2e45645dd1f1095039e7897a1fe6555 397 PIRSF PIRSF002845 1 364 2.6E-167 T 28-03-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted RK98_RS03590 b2e45645dd1f1095039e7897a1fe6555 397 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 207 1.5E-19 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS03590 b2e45645dd1f1095039e7897a1fe6555 397 SUPERFAMILY SSF53790 4 266 3.2E-32 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS03590 b2e45645dd1f1095039e7897a1fe6555 397 Gene3D G3DSA:1.10.287.1080 231 356 2.2E-32 T 28-03-2018 RK98_RS03590 b2e45645dd1f1095039e7897a1fe6555 397 Gene3D G3DSA:3.40.1010.10 3 120 1.2E-14 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS14075 eaa22761a4b625e2028eb956d19af69b 123 SUPERFAMILY SSF54593 4 121 5.09E-15 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS14075 eaa22761a4b625e2028eb956d19af69b 123 Gene3D G3DSA:3.10.180.10 1 123 4.7E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS14075 eaa22761a4b625e2028eb956d19af69b 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 119 1.8E-7 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 Gene3D G3DSA:3.40.50.720 158 406 3.4E-84 T 28-03-2018 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 Pfam PF00390 Malic enzyme, N-terminal domain 16 112 2.3E-23 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 SMART SM01274 15 148 3.2E-80 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 PRINTS PR00072 Malic enzyme signature 156 172 1.0E-8 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 PRINTS PR00072 Malic enzyme signature 187 203 1.0E-8 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 PRINTS PR00072 Malic enzyme signature 77 99 1.0E-8 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 Pfam PF03949 Malic enzyme, NAD binding domain 162 383 1.6E-24 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 SUPERFAMILY SSF51735 160 403 2.63E-82 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 SMART SM00919 160 384 2.5E-124 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 SUPERFAMILY SSF53223 6 158 4.17E-55 T 28-03-2018 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 PIRSF PIRSF000106 35 406 3.3E-85 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 RK98_RS00035 672dd0a5c7e5f909915c1df1fee4481c 409 Gene3D G3DSA:3.40.50.10380 3 157 2.1E-40 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 RK98_RS10650 cd1c5d56bf39344f2fa42e88a1871f8c 178 Pfam PF08761 dUTPase 9 168 1.0E-16 T 28-03-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 RK98_RS10650 cd1c5d56bf39344f2fa42e88a1871f8c 178 SUPERFAMILY SSF101386 5 177 1.57E-34 T 28-03-2018 RK98_RS10650 cd1c5d56bf39344f2fa42e88a1871f8c 178 Gene3D G3DSA:1.10.4010.10 1 178 8.5E-25 T 28-03-2018 RK98_RS10650 cd1c5d56bf39344f2fa42e88a1871f8c 178 PIRSF PIRSF032436 1 178 3.6E-92 T 28-03-2018 IPR016995 Uncharacterised phage-associated protein UCP032436 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 4.0E-26 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01800 Staphylococcus aureus exotoxin signature 159 175 4.0E-26 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01800 Staphylococcus aureus exotoxin signature 199 214 4.0E-26 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01800 Staphylococcus aureus exotoxin signature 117 128 4.0E-26 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 Gene3D G3DSA:2.40.50.110 53 119 4.6E-24 T 28-03-2018 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 Gene3D G3DSA:3.10.20.120 120 231 3.6E-34 T 28-03-2018 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 SUPERFAMILY SSF54334 135 231 3.53E-29 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 160 183 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 SUPERFAMILY SSF50203 37 126 4.33E-28 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01898 Bacterial superantigen superfamily signature 115 128 7.2E-20 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01898 Bacterial superantigen superfamily signature 173 187 7.2E-20 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01898 Bacterial superantigen superfamily signature 86 112 7.2E-20 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01898 Bacterial superantigen superfamily signature 214 230 7.2E-20 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01898 Bacterial superantigen superfamily signature 160 173 7.2E-20 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 168 190 6.9E-13 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 69 83 6.9E-13 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 219 232 6.9E-13 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 193 209 6.9E-13 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 157 214 1.0E-9 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS04035 f60d84b0b319cd9bf5d51ae1f3373e66 232 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 45 126 2.6E-31 T 28-03-2018 IPR015282 Staphylococcal superantigen-like OB-fold domain RK98_RS14975 87c961ca499fc89b71179e0c8da7af93 497 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 RK98_RS14975 87c961ca499fc89b71179e0c8da7af93 497 Pfam PF00324 Amino acid permease 20 478 1.1E-133 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RK98_RS14975 87c961ca499fc89b71179e0c8da7af93 497 PIRSF PIRSF006060 1 496 9.3E-85 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 Pfam PF12344 Ultra-violet resistance protein B 553 594 9.3E-24 T 28-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 7 658 0.0 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 Gene3D G3DSA:3.40.50.300 417 590 1.2E-34 T 28-03-2018 RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 Gene3D G3DSA:3.40.50.300 12 416 1.2E-33 T 28-03-2018 RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 SUPERFAMILY SSF52540 6 416 2.97E-146 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 SMART SM00490 461 547 2.0E-20 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 Pfam PF04851 Type III restriction enzyme, res subunit 14 140 4.7E-12 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 SUPERFAMILY SSF52540 460 573 3.3E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 SUPERFAMILY SSF52540 36 84 3.3E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 Pfam PF02151 UvrB/uvrC motif 626 659 5.6E-9 T 28-03-2018 IPR001943 UVR domain GO:0005515 RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 SUPERFAMILY SSF46600 618 659 1.57E-10 T 28-03-2018 IPR001943 UVR domain GO:0005515 RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 SMART SM00487 11 427 1.7E-30 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 Gene3D G3DSA:4.10.860.10 599 661 1.3E-14 T 28-03-2018 IPR001943 UVR domain GO:0005515 RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 Pfam PF00271 Helicase conserved C-terminal domain 435 546 2.5E-20 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS02165 eb30fd1d955934dae9515ba637bff97a 661 Hamap MF_00204 UvrABC system protein B [uvrB]. 5 660 44.796 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 RK98_RS09025 b6822cdc23c0804223e8e7afea912939 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.0E-39 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RK98_RS09025 b6822cdc23c0804223e8e7afea912939 72 Gene3D G3DSA:2.40.50.140 1 72 6.4E-38 T 28-03-2018 RK98_RS09025 b6822cdc23c0804223e8e7afea912939 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.376 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 RK98_RS09025 b6822cdc23c0804223e8e7afea912939 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.4E-29 T 28-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 RK98_RS09025 b6822cdc23c0804223e8e7afea912939 72 SUPERFAMILY SSF50249 1 71 3.43E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS09025 b6822cdc23c0804223e8e7afea912939 72 SMART SM00316 4 72 9.7E-7 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS09240 31b025db933580ccd1dd37f1cd26233d 335 Pfam PF00107 Zinc-binding dehydrogenase 160 259 3.4E-14 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RK98_RS09240 31b025db933580ccd1dd37f1cd26233d 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 87 9.4E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RK98_RS09240 31b025db933580ccd1dd37f1cd26233d 335 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 149 170 - T 28-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 RK98_RS09240 31b025db933580ccd1dd37f1cd26233d 335 SMART SM00829 15 333 1.3E-9 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RK98_RS09240 31b025db933580ccd1dd37f1cd26233d 335 SUPERFAMILY SSF51735 115 286 4.33E-31 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS09240 31b025db933580ccd1dd37f1cd26233d 335 Gene3D G3DSA:3.40.50.720 160 266 1.2E-14 T 28-03-2018 RK98_RS09240 31b025db933580ccd1dd37f1cd26233d 335 SUPERFAMILY SSF50129 14 140 2.13E-30 T 28-03-2018 IPR011032 GroES-like RK98_RS09240 31b025db933580ccd1dd37f1cd26233d 335 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 334 7.8E-99 T 28-03-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 RK98_RS09240 31b025db933580ccd1dd37f1cd26233d 335 Gene3D G3DSA:3.90.180.10 3 159 6.8E-39 T 28-03-2018 RK98_RS13700 72eafa969eb84d46ccf0b6d82c4574ad 1146 Gene3D G3DSA:3.40.50.300 44 414 3.8E-29 T 28-03-2018 RK98_RS13700 72eafa969eb84d46ccf0b6d82c4574ad 1146 Gene3D G3DSA:3.40.50.300 568 1021 4.7E-32 T 28-03-2018 RK98_RS13700 72eafa969eb84d46ccf0b6d82c4574ad 1146 Pfam PF00350 Dynamin family 45 195 7.5E-24 T 28-03-2018 IPR022812 Dynamin superfamily RK98_RS13700 72eafa969eb84d46ccf0b6d82c4574ad 1146 Pfam PF00350 Dynamin family 592 809 1.1E-38 T 28-03-2018 IPR022812 Dynamin superfamily RK98_RS13700 72eafa969eb84d46ccf0b6d82c4574ad 1146 SUPERFAMILY SSF52540 26 286 1.24E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13700 72eafa969eb84d46ccf0b6d82c4574ad 1146 SUPERFAMILY SSF52540 723 878 4.21E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13700 72eafa969eb84d46ccf0b6d82c4574ad 1146 SUPERFAMILY SSF52540 576 680 4.21E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14200 339bb199a44384347c4c0714f4105ba4 128 Pfam PF00581 Rhodanese-like domain 37 121 8.6E-17 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS14200 339bb199a44384347c4c0714f4105ba4 128 SUPERFAMILY SSF52821 9 122 5.5E-31 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS14200 339bb199a44384347c4c0714f4105ba4 128 Gene3D G3DSA:3.40.250.10 25 128 4.4E-26 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS14200 339bb199a44384347c4c0714f4105ba4 128 SMART SM00450 31 126 3.9E-24 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 SMART SM01350 178 466 1.7E-216 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 Gene3D G3DSA:1.20.5.320 435 467 2.4E-20 T 28-03-2018 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 173 2.3E-51 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 28-03-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 465 5.1E-134 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 466 9.8E-222 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 355 377 1.3E-86 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.3E-86 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 65 94 1.3E-86 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 1.3E-86 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 118 143 1.3E-86 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 1.3E-86 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 Gene3D G3DSA:3.40.50.720 1 179 3.4E-34 T 28-03-2018 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 PIRSF PIRSF000109 1 468 1.0E-240 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 SUPERFAMILY SSF48179 176 467 4.25E-129 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 SUPERFAMILY SSF51735 3 172 3.26E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS14085 1acaa2c81c4cefaf1a90d56a6459a3dd 468 Gene3D G3DSA:1.10.1040.10 180 433 2.2E-112 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RK98_RS10150 b377bd5b7673bdd3d7ee8c9aaf9ecc9c 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 28-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 RK98_RS10150 b377bd5b7673bdd3d7ee8c9aaf9ecc9c 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 24.66 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RK98_RS10150 b377bd5b7673bdd3d7ee8c9aaf9ecc9c 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 1.5E-34 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RK98_RS10150 b377bd5b7673bdd3d7ee8c9aaf9ecc9c 94 Gene3D G3DSA:2.30.33.40 1 94 1.6E-35 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RK98_RS10150 b377bd5b7673bdd3d7ee8c9aaf9ecc9c 94 PRINTS PR00297 10kDa chaperonin signature 80 93 8.6E-28 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RK98_RS10150 b377bd5b7673bdd3d7ee8c9aaf9ecc9c 94 PRINTS PR00297 10kDa chaperonin signature 2 17 8.6E-28 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RK98_RS10150 b377bd5b7673bdd3d7ee8c9aaf9ecc9c 94 PRINTS PR00297 10kDa chaperonin signature 59 71 8.6E-28 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RK98_RS10150 b377bd5b7673bdd3d7ee8c9aaf9ecc9c 94 PRINTS PR00297 10kDa chaperonin signature 24 45 8.6E-28 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RK98_RS10150 b377bd5b7673bdd3d7ee8c9aaf9ecc9c 94 SMART SM00883 1 93 2.3E-49 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 RK98_RS10150 b377bd5b7673bdd3d7ee8c9aaf9ecc9c 94 SUPERFAMILY SSF50129 1 94 3.88E-31 T 28-03-2018 IPR011032 GroES-like RK98_RS12770 e2de9b11901e5b33dca161d27226fe80 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 238 3.9E-12 T 28-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 RK98_RS12770 e2de9b11901e5b33dca161d27226fe80 305 SUPERFAMILY SSF55120 1 238 5.76E-76 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS12770 e2de9b11901e5b33dca161d27226fe80 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 3 217 8.0E-75 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS12770 e2de9b11901e5b33dca161d27226fe80 305 Gene3D G3DSA:3.30.2350.10 1 229 1.3E-78 T 28-03-2018 RK98_RS12770 e2de9b11901e5b33dca161d27226fe80 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 179 5.8E-54 T 28-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 RK98_RS12770 e2de9b11901e5b33dca161d27226fe80 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 304 18.341 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS03455 b61c9617b7328282f975c8506f2660f7 460 SMART SM00345 9 68 2.8E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS03455 b61c9617b7328282f975c8506f2660f7 460 Gene3D G3DSA:3.40.640.10 116 361 1.3E-22 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS03455 b61c9617b7328282f975c8506f2660f7 460 Gene3D G3DSA:1.10.10.10 2 81 1.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03455 b61c9617b7328282f975c8506f2660f7 460 SUPERFAMILY SSF46785 4 76 5.25E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03455 b61c9617b7328282f975c8506f2660f7 460 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 2.4E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS03455 b61c9617b7328282f975c8506f2660f7 460 SUPERFAMILY SSF53383 63 455 5.65E-55 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS03455 b61c9617b7328282f975c8506f2660f7 460 Gene3D G3DSA:3.90.1150.10 362 457 1.0E-8 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS03455 b61c9617b7328282f975c8506f2660f7 460 Pfam PF00155 Aminotransferase class I and II 137 391 6.4E-12 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 204 895 0.0 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Gene3D G3DSA:2.40.270.10 751 848 2.9E-11 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Pfam PF04560 RNA polymerase Rpb2, domain 7 1071 1146 8.9E-26 T 28-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Gene3D G3DSA:3.90.1100.10 602 670 1.9E-13 T 28-03-2018 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Gene3D G3DSA:3.90.1100.10 276 601 7.0E-81 T 28-03-2018 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Gene3D G3DSA:3.90.1100.10 20 241 2.4E-58 T 28-03-2018 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Gene3D G3DSA:2.40.270.10 849 1055 2.6E-77 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Gene3D G3DSA:3.90.1800.10 1072 1115 1.0E-11 T 28-03-2018 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Pfam PF10385 RNA polymerase beta subunit external 1 domain 546 613 1.9E-25 T 28-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1147 12.522 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Gene3D G3DSA:2.40.50.100 672 750 1.9E-22 T 28-03-2018 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 ProSitePatterns PS01166 RNA polymerases beta chain signature. 922 934 - T 28-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 289 8.6E-29 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Pfam PF04561 RNA polymerase Rpb2, domain 2 373 409 1.2E-4 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 SUPERFAMILY SSF64484 377 1155 0.0 T 28-03-2018 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 SUPERFAMILY SSF64484 14 289 0.0 T 28-03-2018 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Pfam PF00562 RNA polymerase Rpb2, domain 6 675 1069 2.2E-165 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Pfam PF04565 RNA polymerase Rpb2, domain 3 468 536 1.1E-28 T 28-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03320 ba66ff13808b63cdb321281f1acde315 1183 Pfam PF04563 RNA polymerase beta subunit 29 453 3.9E-29 T 28-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS02635 00d8baecaa271226417474a7908b4c27 288 Gene3D G3DSA:1.10.10.10 1 83 3.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02635 00d8baecaa271226417474a7908b4c27 288 Gene3D G3DSA:3.40.190.10 170 243 8.4E-5 T 28-03-2018 RK98_RS02635 00d8baecaa271226417474a7908b4c27 288 SUPERFAMILY SSF46785 1 110 4.08E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02635 00d8baecaa271226417474a7908b4c27 288 Pfam PF03466 LysR substrate binding domain 88 279 1.9E-23 T 28-03-2018 IPR005119 LysR, substrate-binding RK98_RS02635 00d8baecaa271226417474a7908b4c27 288 SUPERFAMILY SSF53850 88 285 7.84E-22 T 28-03-2018 RK98_RS02635 00d8baecaa271226417474a7908b4c27 288 Gene3D G3DSA:3.40.190.10 87 169 3.6E-9 T 28-03-2018 RK98_RS02635 00d8baecaa271226417474a7908b4c27 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.9E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS02635 00d8baecaa271226417474a7908b4c27 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS02635 00d8baecaa271226417474a7908b4c27 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS02635 00d8baecaa271226417474a7908b4c27 288 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS01365 9a4a0a3dd894de73f0cfdc8e70917b50 388 Gene3D G3DSA:3.10.500.10 36 200 2.7E-47 T 28-03-2018 IPR028076 Staphopain proregion RK98_RS01365 9a4a0a3dd894de73f0cfdc8e70917b50 388 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 332 342 - T 28-03-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 RK98_RS01365 9a4a0a3dd894de73f0cfdc8e70917b50 388 SUPERFAMILY SSF54001 217 388 5.03E-98 T 28-03-2018 RK98_RS01365 9a4a0a3dd894de73f0cfdc8e70917b50 388 Pfam PF05543 Staphopain peptidase C47 216 388 4.0E-101 T 28-03-2018 IPR008750 Staphopain peptidase C47 GO:0006508|GO:0008234 RK98_RS01365 9a4a0a3dd894de73f0cfdc8e70917b50 388 SUPERFAMILY SSF54403 37 202 5.27E-69 T 28-03-2018 RK98_RS01365 9a4a0a3dd894de73f0cfdc8e70917b50 388 Pfam PF14731 Staphopain proregion 37 203 3.7E-85 T 28-03-2018 IPR028076 Staphopain proregion RK98_RS01365 9a4a0a3dd894de73f0cfdc8e70917b50 388 Gene3D G3DSA:3.90.70.10 206 388 4.7E-21 T 28-03-2018 RK98_RS11320 166bb4278a728e3fbb52bdb9ef12b0ef 269 Hamap MF_00361 NAD kinase [nadK]. 1 264 23.85 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 RK98_RS11320 166bb4278a728e3fbb52bdb9ef12b0ef 269 Gene3D G3DSA:2.60.200.30 123 239 1.6E-25 T 28-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 RK98_RS11320 166bb4278a728e3fbb52bdb9ef12b0ef 269 Pfam PF01513 ATP-NAD kinase 34 189 3.9E-26 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 RK98_RS11320 166bb4278a728e3fbb52bdb9ef12b0ef 269 SUPERFAMILY SSF111331 20 262 5.89E-64 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain RK98_RS11320 166bb4278a728e3fbb52bdb9ef12b0ef 269 Gene3D G3DSA:3.40.50.10330 1 122 1.4E-23 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 RK98_RS09925 c4f755ab2b73e0fd3e25c4bf7be5201f 108 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 106 6.1E-35 T 28-03-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 RK98_RS09925 c4f755ab2b73e0fd3e25c4bf7be5201f 108 Pfam PF01740 STAS domain 5 99 2.1E-13 T 28-03-2018 IPR002645 STAS domain RK98_RS09925 c4f755ab2b73e0fd3e25c4bf7be5201f 108 Gene3D G3DSA:3.30.750.24 1 105 2.6E-16 T 28-03-2018 IPR002645 STAS domain RK98_RS09925 c4f755ab2b73e0fd3e25c4bf7be5201f 108 SUPERFAMILY SSF52091 3 103 1.33E-24 T 28-03-2018 IPR002645 STAS domain RK98_RS05015 cb4282a562a881dc4875204c1b56acac 341 SUPERFAMILY SSF51735 143 297 4.25E-10 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05015 cb4282a562a881dc4875204c1b56acac 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 131 5.7E-9 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RK98_RS05015 cb4282a562a881dc4875204c1b56acac 341 Hamap MF_02069 Ribulose-5-phosphate reductase [tarJ]. 1 341 59.52 T 28-03-2018 IPR034710 Ribulose-5-phosphate reductase GO:0050256 RK98_RS05015 cb4282a562a881dc4875204c1b56acac 341 Gene3D G3DSA:3.40.50.720 167 279 6.9E-6 T 28-03-2018 RK98_RS05015 cb4282a562a881dc4875204c1b56acac 341 Gene3D G3DSA:3.90.180.10 7 166 8.8E-18 T 28-03-2018 RK98_RS05015 cb4282a562a881dc4875204c1b56acac 341 SUPERFAMILY SSF50129 24 173 4.4E-18 T 28-03-2018 IPR011032 GroES-like RK98_RS05015 cb4282a562a881dc4875204c1b56acac 341 Pfam PF00107 Zinc-binding dehydrogenase 219 293 5.8E-8 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RK98_RS09450 9cb65797d39ba8f0556dee54026210af 260 SUPERFAMILY SSF52540 2 238 3.71E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09450 9cb65797d39ba8f0556dee54026210af 260 Pfam PF00005 ABC transporter 18 170 3.8E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS09450 9cb65797d39ba8f0556dee54026210af 260 Gene3D G3DSA:3.40.50.300 1 259 2.3E-51 T 28-03-2018 RK98_RS09450 9cb65797d39ba8f0556dee54026210af 260 SMART SM00382 27 221 2.0E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02420 44f8fec5ca0ca3b79137fd2fe9aafd4c 202 Pfam PF01063 Amino-transferase class IV 2 199 1.7E-37 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RK98_RS02420 44f8fec5ca0ca3b79137fd2fe9aafd4c 202 Gene3D G3DSA:3.30.470.10 1 75 3.7E-16 T 28-03-2018 RK98_RS02420 44f8fec5ca0ca3b79137fd2fe9aafd4c 202 Gene3D G3DSA:3.20.10.10 84 195 2.0E-16 T 28-03-2018 RK98_RS02420 44f8fec5ca0ca3b79137fd2fe9aafd4c 202 SUPERFAMILY SSF56752 2 199 3.66E-32 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 RK98_RS06740 6db14858f9b65c5639d455400b39976a 476 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 8 475 2.3E-187 T 28-03-2018 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 RK98_RS06740 6db14858f9b65c5639d455400b39976a 476 Pfam PF13520 Amino acid permease 12 452 1.3E-71 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS06740 6db14858f9b65c5639d455400b39976a 476 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 474 3.9E-172 T 28-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 RK98_RS06740 6db14858f9b65c5639d455400b39976a 476 PIRSF PIRSF006060 1 472 9.2E-54 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS12665 3641a46e214f3a488890afe50344016f 181 SUPERFAMILY SSF56235 6 181 1.1E-58 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS12665 3641a46e214f3a488890afe50344016f 181 Gene3D G3DSA:3.60.20.10 9 181 1.2E-28 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS12665 3641a46e214f3a488890afe50344016f 181 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 9 181 1.7E-83 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RK98_RS12665 3641a46e214f3a488890afe50344016f 181 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 8 181 40.941 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RK98_RS12665 3641a46e214f3a488890afe50344016f 181 Pfam PF00227 Proteasome subunit 7 180 3.0E-27 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 RK98_RS12665 3641a46e214f3a488890afe50344016f 181 PIRSF PIRSF039093 2 181 2.4E-86 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 RK98_RS10805 9133dbf1f793c00fa993b42ca8640665 99 Pfam PF11166 Protein of unknown function (DUF2951) 2 99 1.4E-55 T 28-03-2018 IPR021337 Protein of unknown function DUF2951 RK98_RS10805 9133dbf1f793c00fa993b42ca8640665 99 Gene3D G3DSA:1.20.5.110 5 97 5.9E-4 T 28-03-2018 RK98_RS09805 7a2116716a8e0e82163b674757760f61 97 Pfam PF02583 Metal-sensitive transcriptional repressor 14 92 6.0E-28 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RK98_RS10165 d7d63ccd0039f62a6e74f9ecc5874f53 224 SMART SM00530 5 61 5.1E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS10165 d7d63ccd0039f62a6e74f9ecc5874f53 224 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 66 1.3E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS10165 d7d63ccd0039f62a6e74f9ecc5874f53 224 Gene3D G3DSA:1.10.260.40 1 213 3.0E-9 T 28-03-2018 RK98_RS10165 d7d63ccd0039f62a6e74f9ecc5874f53 224 SUPERFAMILY SSF47413 2 67 3.75E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 Pfam PF02274 Amidinotransferase 20 408 4.6E-120 T 28-03-2018 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 PIRSF PIRSF006356 1 411 8.2E-177 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 PRINTS PR01466 Bacterial arginine deiminase signature 367 381 3.1E-54 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 PRINTS PR01466 Bacterial arginine deiminase signature 390 408 3.1E-54 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 PRINTS PR01466 Bacterial arginine deiminase signature 347 364 3.1E-54 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 PRINTS PR01466 Bacterial arginine deiminase signature 180 195 3.1E-54 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 PRINTS PR01466 Bacterial arginine deiminase signature 152 170 3.1E-54 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 PRINTS PR01466 Bacterial arginine deiminase signature 4 24 3.1E-54 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 TIGRFAM TIGR01078 arcA: arginine deiminase 6 411 5.1E-164 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 Gene3D G3DSA:3.75.10.10 204 411 2.7E-43 T 28-03-2018 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 Gene3D G3DSA:3.75.10.10 4 149 3.5E-38 T 28-03-2018 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 Gene3D G3DSA:3.75.10.10 150 203 2.2E-15 T 28-03-2018 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 SUPERFAMILY SSF55909 5 411 1.1E-136 T 28-03-2018 RK98_RS06730 fe1a673ff67be95b03f7df00cf63ef8a 411 Hamap MF_00242 Arginine deiminase [arcA]. 3 411 47.654 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 RK98_RS08255 004b426b91dc89ccf5ef96dffa4cbeed 111 SUPERFAMILY SSF55729 4 107 6.65E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS08255 004b426b91dc89ccf5ef96dffa4cbeed 111 Pfam PF13673 Acetyltransferase (GNAT) domain 15 102 2.9E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS08255 004b426b91dc89ccf5ef96dffa4cbeed 111 Gene3D G3DSA:3.40.630.30 1 111 5.3E-16 T 28-03-2018 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 ProSitePatterns PS00654 PRD domain signature. 102 114 - T 28-03-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 Gene3D G3DSA:1.10.1790.10 59 168 8.7E-23 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 Gene3D G3DSA:1.10.1790.10 169 280 1.7E-21 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 SUPERFAMILY SSF63520 180 275 9.94E-23 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 Pfam PF03123 CAT RNA binding domain 4 60 2.4E-19 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 SMART SM01061 4 63 3.3E-23 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 SUPERFAMILY SSF63520 61 169 4.45E-26 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 Gene3D G3DSA:2.30.24.10 1 58 1.2E-21 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 Pfam PF00874 PRD domain 187 275 1.3E-20 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 Pfam PF00874 PRD domain 83 166 7.5E-22 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS13260 d2658d2a205814a05ddb8dc3eec8548d 283 SUPERFAMILY SSF50151 4 57 2.09E-14 T 28-03-2018 IPR004341 CAT RNA-binding domain GO:0003723 RK98_RS12775 152fbf490229b06ac02c6447db46ad8d 323 Pfam PF01687 Riboflavin kinase 184 310 4.1E-36 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 RK98_RS12775 152fbf490229b06ac02c6447db46ad8d 323 Gene3D G3DSA:3.40.50.620 1 179 4.3E-33 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS12775 152fbf490229b06ac02c6447db46ad8d 323 SUPERFAMILY SSF52374 20 176 5.63E-25 T 28-03-2018 RK98_RS12775 152fbf490229b06ac02c6447db46ad8d 323 SMART SM00904 183 312 1.4E-58 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 RK98_RS12775 152fbf490229b06ac02c6447db46ad8d 323 SUPERFAMILY SSF82114 174 312 1.26E-42 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 RK98_RS12775 152fbf490229b06ac02c6447db46ad8d 323 Gene3D G3DSA:2.40.30.30 180 315 1.2E-38 T 28-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 RK98_RS12775 152fbf490229b06ac02c6447db46ad8d 323 Pfam PF06574 FAD synthetase 17 166 2.3E-48 T 28-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 RK98_RS12775 152fbf490229b06ac02c6447db46ad8d 323 PIRSF PIRSF004491 1 317 5.1E-97 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 RK98_RS12775 152fbf490229b06ac02c6447db46ad8d 323 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 22 311 7.4E-86 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 4.9E-11 T 28-03-2018 RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 PRINTS PR01036 Tetracycline resistance protein TetB signature 235 255 4.9E-11 T 28-03-2018 RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 PRINTS PR01036 Tetracycline resistance protein TetB signature 265 289 4.9E-11 T 28-03-2018 RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 PRINTS PR01036 Tetracycline resistance protein TetB signature 429 453 4.9E-11 T 28-03-2018 RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 SUPERFAMILY SSF103473 598 627 4.05E-70 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 SUPERFAMILY SSF103473 375 546 4.05E-70 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 SUPERFAMILY SSF103473 138 323 4.05E-70 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 142 621 3.0E-133 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 Gene3D G3DSA:1.20.1250.20 136 327 5.6E-34 T 28-03-2018 RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 Pfam PF07690 Major Facilitator Superfamily 145 536 5.4E-54 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS08360 76589a431ec5ce4d10df72705b63d0d7 643 Gene3D G3DSA:1.20.1250.20 386 639 1.0E-28 T 28-03-2018 RK98_RS04610 3d9bc3d103849baaa52084e8032900a0 340 Gene3D G3DSA:3.30.930.10 10 254 3.7E-52 T 28-03-2018 RK98_RS04610 3d9bc3d103849baaa52084e8032900a0 340 SUPERFAMILY SSF82649 253 339 6.8E-24 T 28-03-2018 RK98_RS04610 3d9bc3d103849baaa52084e8032900a0 340 SUPERFAMILY SSF55681 5 251 8.52E-64 T 28-03-2018 RK98_RS04610 3d9bc3d103849baaa52084e8032900a0 340 Pfam PF03099 Biotin/lipoate A/B protein ligase family 56 160 1.2E-8 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RK98_RS04610 3d9bc3d103849baaa52084e8032900a0 340 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 254 338 1.2E-25 T 28-03-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 RK98_RS04610 3d9bc3d103849baaa52084e8032900a0 340 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 14 332 1.7E-72 T 28-03-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 RK98_RS04610 3d9bc3d103849baaa52084e8032900a0 340 Gene3D G3DSA:3.30.390.50 255 340 2.1E-23 T 28-03-2018 RK98_RS12485 f21333213f6302817fe6f6354a347a7b 364 PIRSF PIRSF006004 9 364 9.9E-139 T 28-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS12485 f21333213f6302817fe6f6354a347a7b 364 Gene3D G3DSA:3.20.20.70 28 360 4.2E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS12485 f21333213f6302817fe6f6354a347a7b 364 Pfam PF04055 Radical SAM superfamily 121 291 1.1E-18 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS12485 f21333213f6302817fe6f6354a347a7b 364 SUPERFAMILY SSF102114 113 333 5.49E-15 T 28-03-2018 RK98_RS12485 f21333213f6302817fe6f6354a347a7b 364 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 17 363 5.1E-154 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS12485 f21333213f6302817fe6f6354a347a7b 364 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 18 360 72.288 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS12485 f21333213f6302817fe6f6354a347a7b 364 Pfam PF13394 4Fe-4S single cluster domain 126 224 2.4E-6 T 28-03-2018 RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 16 34 9.8E-5 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 175 197 9.8E-5 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 PRINTS PR01898 Bacterial superantigen superfamily signature 167 180 1.1E-6 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 PRINTS PR01898 Bacterial superantigen superfamily signature 180 194 1.1E-6 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 PRINTS PR01898 Bacterial superantigen superfamily signature 92 118 1.1E-6 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 PRINTS PR01898 Bacterial superantigen superfamily signature 125 138 1.1E-6 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 167 190 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 PRINTS PR01800 Staphylococcus aureus exotoxin signature 127 138 5.2E-5 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 PRINTS PR01800 Staphylococcus aureus exotoxin signature 166 182 5.2E-5 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 PRINTS PR01800 Staphylococcus aureus exotoxin signature 205 220 5.2E-5 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 166 232 1.5E-6 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 Gene3D G3DSA:3.10.20.120 127 239 3.9E-29 T 28-03-2018 RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 Gene3D G3DSA:2.40.50.110 46 126 5.9E-4 T 28-03-2018 RK98_RS12210 869620540c07cc4e197d260ef31c85a3 241 SUPERFAMILY SSF54334 138 237 2.75E-27 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 Gene3D G3DSA:3.40.50.300 117 172 8.3E-8 T 28-03-2018 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 SMART SM00382 100 302 1.3E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 Pfam PF02978 Signal peptide binding domain 329 427 6.6E-35 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 2.5E-21 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 1.7E-189 T 28-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 Gene3D G3DSA:1.10.260.30 328 432 5.6E-40 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 SUPERFAMILY SSF52540 43 355 1.51E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 SMART SM00962 101 297 1.0E-115 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 Gene3D G3DSA:1.20.120.140 1 86 2.0E-29 T 28-03-2018 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 5.9E-77 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 448 35.156 T 28-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 SMART SM00963 2 87 1.2E-30 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 Gene3D G3DSA:1.20.120.140 196 311 4.3E-32 T 28-03-2018 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 Gene3D G3DSA:3.40.50.300 87 116 0.022 T 28-03-2018 RK98_RS12585 084ff5a0817d4ad4ab9c0b0ce0554c3c 455 SUPERFAMILY SSF47446 329 430 2.94E-38 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 RK98_RS01645 6388e4a04ec2d2132594093b7d2c77a4 74 Gene3D G3DSA:2.60.40.1080 1 74 2.5E-15 T 28-03-2018 RK98_RS01645 6388e4a04ec2d2132594093b7d2c77a4 74 SUPERFAMILY SSF49373 4 72 2.55E-11 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments RK98_RS01645 6388e4a04ec2d2132594093b7d2c77a4 74 SMART SM00635 1 71 1.3E-4 T 28-03-2018 IPR003343 Bacterial Ig-like, group 2 RK98_RS01645 6388e4a04ec2d2132594093b7d2c77a4 74 Pfam PF02368 Bacterial Ig-like domain (group 2) 5 69 1.2E-12 T 28-03-2018 IPR003343 Bacterial Ig-like, group 2 RK98_RS01230 17141e094b1840fbe07c36595ff6fc6c 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 1.3E-20 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RK98_RS01230 17141e094b1840fbe07c36595ff6fc6c 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 1.3E-20 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RK98_RS01230 17141e094b1840fbe07c36595ff6fc6c 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.3E-20 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RK98_RS01230 17141e094b1840fbe07c36595ff6fc6c 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.3E-20 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 RK98_RS01230 17141e094b1840fbe07c36595ff6fc6c 252 Pfam PF00557 Metallopeptidase family M24 12 240 2.1E-49 T 28-03-2018 IPR000994 Peptidase M24 RK98_RS01230 17141e094b1840fbe07c36595ff6fc6c 252 Hamap MF_01974 Methionine aminopeptidase [map]. 1 249 36.961 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 RK98_RS01230 17141e094b1840fbe07c36595ff6fc6c 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 248 7.1E-85 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 RK98_RS01230 17141e094b1840fbe07c36595ff6fc6c 252 Gene3D G3DSA:3.90.230.10 1 252 4.4E-72 T 28-03-2018 RK98_RS01230 17141e094b1840fbe07c36595ff6fc6c 252 SUPERFAMILY SSF55920 2 248 2.36E-73 T 28-03-2018 IPR000994 Peptidase M24 RK98_RS02715 efb3d84bf83377b07ea1ac5f1366b0a7 168 SUPERFAMILY SSF55729 3 167 1.89E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS02715 efb3d84bf83377b07ea1ac5f1366b0a7 168 Gene3D G3DSA:3.40.630.30 2 168 2.4E-31 T 28-03-2018 RK98_RS02715 efb3d84bf83377b07ea1ac5f1366b0a7 168 Pfam PF13420 Acetyltransferase (GNAT) domain 6 161 1.0E-16 T 28-03-2018 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 SUPERFAMILY SSF54373 297 479 9.81E-57 T 28-03-2018 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 87 110 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 SUPERFAMILY SSF51905 478 540 2.04E-85 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 SUPERFAMILY SSF51905 4 295 2.04E-85 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 PIRSF PIRSF000137 1 543 9.4E-137 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 6 559 63.467 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 Gene3D G3DSA:4.10.450.10 43 108 5.8E-23 T 28-03-2018 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 261 275 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 Pfam PF05199 GMC oxidoreductase 394 532 2.4E-36 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 Pfam PF00732 GMC oxidoreductase 8 302 3.0E-78 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 Gene3D G3DSA:3.30.560.10 109 494 1.4E-101 T 28-03-2018 RK98_RS06890 9a3ff34ce4d058d1e2f739c2cc3b45e3 569 TIGRFAM TIGR01810 betA: choline dehydrogenase 9 542 4.2E-282 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 161 184 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 SUPERFAMILY SSF54334 135 233 1.31E-22 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 145 162 1.3E-105 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 221 234 1.3E-105 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 169 191 1.3E-105 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 121 141 1.3E-105 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 15 33 1.3E-105 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 91 114 1.3E-105 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 39 56 1.3E-105 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 62 76 1.3E-105 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 195 211 1.3E-105 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 147 213 1.0E-4 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 SUPERFAMILY SSF50203 41 133 9.89E-58 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 Gene3D G3DSA:3.10.20.120 122 234 3.5E-32 T 28-03-2018 RK98_RS01925 0fa0e30f6cf61bd03b8afcd9f2ed877c 234 Gene3D G3DSA:2.40.50.110 58 121 2.6E-49 T 28-03-2018 RK98_RS11800 abaedb157f3cb5b681954ab5e76eb30f 430 SUPERFAMILY SSF52777 188 428 5.34E-88 T 28-03-2018 RK98_RS11800 abaedb157f3cb5b681954ab5e76eb30f 430 Pfam PF02817 e3 binding domain 124 158 8.0E-17 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS11800 abaedb157f3cb5b681954ab5e76eb30f 430 Gene3D G3DSA:4.10.320.10 115 187 2.0E-20 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS11800 abaedb157f3cb5b681954ab5e76eb30f 430 Pfam PF00364 Biotin-requiring enzyme 4 76 4.0E-24 T 28-03-2018 IPR000089 Biotin/lipoyl attachment RK98_RS11800 abaedb157f3cb5b681954ab5e76eb30f 430 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 200 428 4.0E-89 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS11800 abaedb157f3cb5b681954ab5e76eb30f 430 Gene3D G3DSA:2.40.50.100 1 83 9.9E-18 T 28-03-2018 RK98_RS11800 abaedb157f3cb5b681954ab5e76eb30f 430 SUPERFAMILY SSF47005 118 164 1.83E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS11800 abaedb157f3cb5b681954ab5e76eb30f 430 SUPERFAMILY SSF51230 3 92 4.45E-26 T 28-03-2018 IPR011053 Single hybrid motif RK98_RS11800 abaedb157f3cb5b681954ab5e76eb30f 430 Gene3D G3DSA:3.30.559.10 188 428 8.5E-90 T 28-03-2018 RK98_RS11800 abaedb157f3cb5b681954ab5e76eb30f 430 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 Gene3D G3DSA:3.40.50.720 140 263 2.9E-39 T 28-03-2018 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 8.1E-41 T 28-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 SUPERFAMILY SSF53223 1 121 1.92E-40 T 28-03-2018 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 Gene3D G3DSA:3.40.50.10860 11 139 3.1E-50 T 28-03-2018 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.149 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 SUPERFAMILY SSF51735 122 278 9.28E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.4E-80 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 1.4E-80 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.4E-80 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.4E-80 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.4E-80 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.4E-80 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.4E-80 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RK98_RS11630 99e41387db261e2b5eb2fea062ea02b3 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 1.4E-65 T 28-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 RK98_RS11900 985e053e7a916d3cec6cee8b8e3d9e7f 356 Hamap MF_01664 Heme A synthase [ctaA]. 56 355 28.139 T 28-03-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 RK98_RS11900 985e053e7a916d3cec6cee8b8e3d9e7f 356 Pfam PF02628 Cytochrome oxidase assembly protein 105 339 5.3E-30 T 28-03-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 RK98_RS10470 8f2d8fcc45e3fa1c1c2d9a95b2821898 435 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 150 424 2.0E-71 T 28-03-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 RK98_RS10470 8f2d8fcc45e3fa1c1c2d9a95b2821898 435 Pfam PF01458 Uncharacterized protein family (UPF0051) 184 408 1.7E-57 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 RK98_RS10470 8f2d8fcc45e3fa1c1c2d9a95b2821898 435 SUPERFAMILY SSF101960 12 433 9.29E-111 T 28-03-2018 RK98_RS14710 27bf185433357bfd8700a52f9dd4abca 150 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 143 1.4E-50 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 RK98_RS14710 27bf185433357bfd8700a52f9dd4abca 150 Gene3D G3DSA:3.50.80.10 1 150 3.5E-51 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain RK98_RS14710 27bf185433357bfd8700a52f9dd4abca 150 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 31.034 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 RK98_RS14710 27bf185433357bfd8700a52f9dd4abca 150 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 2.5E-52 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 RK98_RS14710 27bf185433357bfd8700a52f9dd4abca 150 SUPERFAMILY SSF69500 1 143 1.83E-52 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain RK98_RS01685 f17d8da0da27cc9f2515119dfc2bba9d 245 SUPERFAMILY SSF52096 31 174 4.69E-40 T 28-03-2018 IPR029045 ClpP/crotonase-like domain RK98_RS01685 f17d8da0da27cc9f2515119dfc2bba9d 245 Gene3D G3DSA:3.90.226.10 29 188 2.6E-26 T 28-03-2018 RK98_RS01685 f17d8da0da27cc9f2515119dfc2bba9d 245 PRINTS PR00127 Clp protease catalytic subunit P signature 148 167 3.7E-9 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RK98_RS01685 f17d8da0da27cc9f2515119dfc2bba9d 245 PRINTS PR00127 Clp protease catalytic subunit P signature 91 110 3.7E-9 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RK98_RS01685 f17d8da0da27cc9f2515119dfc2bba9d 245 PRINTS PR00127 Clp protease catalytic subunit P signature 41 61 3.7E-9 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RK98_RS01685 f17d8da0da27cc9f2515119dfc2bba9d 245 Pfam PF00574 Clp protease 35 168 1.1E-31 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RK98_RS06835 7e01c54ca177d151365471f6e09d5949 201 SUPERFAMILY SSF51735 3 104 1.72E-18 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS06835 7e01c54ca177d151365471f6e09d5949 201 Pfam PF13241 Putative NAD(P)-binding 5 113 9.0E-23 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RK98_RS06835 7e01c54ca177d151365471f6e09d5949 201 Gene3D G3DSA:3.30.160.110 119 146 1.5E-10 T 28-03-2018 RK98_RS06835 7e01c54ca177d151365471f6e09d5949 201 SUPERFAMILY SSF75615 107 199 1.7E-21 T 28-03-2018 RK98_RS06835 7e01c54ca177d151365471f6e09d5949 201 Pfam PF14824 Sirohaem biosynthesis protein central 117 143 4.9E-6 T 28-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RK98_RS06835 7e01c54ca177d151365471f6e09d5949 201 Gene3D G3DSA:3.40.50.720 2 118 2.0E-20 T 28-03-2018 RK98_RS06835 7e01c54ca177d151365471f6e09d5949 201 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 3 184 5.8E-33 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RK98_RS07005 f3259872b782c08319c6c7da0155fe56 240 Pfam PF02677 Uncharacterized BCR, COG1636 38 217 8.1E-61 T 28-03-2018 IPR003828 Probable epoxyqueuosine reductase QueH RK98_RS09715 e061f5349aa5f50db2e8a3c50e054e2b 134 Gene3D G3DSA:1.20.5.440 90 132 1.8E-13 T 28-03-2018 RK98_RS09715 e061f5349aa5f50db2e8a3c50e054e2b 134 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 132 1.4E-35 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09715 e061f5349aa5f50db2e8a3c50e054e2b 134 SUPERFAMILY SSF46604 88 133 1.31E-7 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09715 e061f5349aa5f50db2e8a3c50e054e2b 134 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 87 132 1.2E-13 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09715 e061f5349aa5f50db2e8a3c50e054e2b 134 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 4.0E-41 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09715 e061f5349aa5f50db2e8a3c50e054e2b 134 Gene3D G3DSA:2.60.15.10 1 89 2.8E-26 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09715 e061f5349aa5f50db2e8a3c50e054e2b 134 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 22.974 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09715 e061f5349aa5f50db2e8a3c50e054e2b 134 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 2.2E-25 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09715 e061f5349aa5f50db2e8a3c50e054e2b 134 SUPERFAMILY SSF51344 3 85 7.72E-24 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 Pfam PF00113 Enolase, C-terminal TIM barrel domain 143 429 1.8E-130 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 PRINTS PR00148 Enolase signature 109 125 1.6E-47 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 PRINTS PR00148 Enolase signature 37 51 1.6E-47 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 PRINTS PR00148 Enolase signature 317 328 1.6E-47 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 PRINTS PR00148 Enolase signature 369 386 1.6E-47 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 PRINTS PR00148 Enolase signature 340 354 1.6E-47 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 PRINTS PR00148 Enolase signature 163 176 1.6E-47 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 SUPERFAMILY SSF51604 142 432 3.96E-127 T 28-03-2018 IPR029065 Enolase C-terminal domain-like RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 SMART SM01193 4 136 8.8E-98 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 431 1.5E-208 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 SUPERFAMILY SSF54826 4 143 7.07E-59 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 ProSitePatterns PS00164 Enolase signature. 340 353 - T 28-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 PIRSF PIRSF001400 1 431 1.3E-188 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 Gene3D G3DSA:3.20.20.120 130 434 3.9E-101 T 28-03-2018 IPR029065 Enolase C-terminal domain-like RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 Pfam PF03952 Enolase, N-terminal domain 4 136 7.3E-61 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 Hamap MF_00318 Enolase [eno]. 2 417 44.733 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 Gene3D G3DSA:3.30.390.10 3 127 7.5E-54 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02055 f71b260601f95c2a2fb80f397b9f8006 434 SMART SM01192 141 431 4.4E-215 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS08055 db64600757e60a56c912b7254579626f 83 SUPERFAMILY SSF143120 1 80 5.1E-23 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RK98_RS08055 db64600757e60a56c912b7254579626f 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 3.8E-21 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM RK98_RS08055 db64600757e60a56c912b7254579626f 83 Gene3D G3DSA:3.40.1620.10 1 39 3.2E-11 T 28-03-2018 RK98_RS08055 db64600757e60a56c912b7254579626f 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 6 54 7.5E-7 T 28-03-2018 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 Gene3D G3DSA:3.30.310.50 503 600 6.9E-20 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 92 223 1.7E-41 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 SUPERFAMILY SSF53738 346 489 9.42E-26 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 Gene3D G3DSA:3.40.120.10 65 258 1.6E-51 T 28-03-2018 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 Gene3D G3DSA:3.40.120.10 378 491 6.5E-31 T 28-03-2018 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 271 290 3.9E-9 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 186 200 3.9E-9 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 338 353 3.9E-9 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 187 196 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 255 355 4.2E-26 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 SUPERFAMILY SSF55957 504 589 6.8E-11 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 SUPERFAMILY SSF53738 253 357 1.33E-21 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 366 486 3.3E-15 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 Gene3D G3DSA:3.40.120.10 259 377 2.0E-28 T 28-03-2018 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 528 582 2.6E-7 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS07545 d4c4e4c4746a29576ec73a51669d7c50 602 SUPERFAMILY SSF53738 87 264 8.24E-43 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS02445 842210657c8abebb7aec38b3b6f586dc 237 PIRSF PIRSF000370 2 237 8.5E-51 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 RK98_RS02445 842210657c8abebb7aec38b3b6f586dc 237 Pfam PF13353 4Fe-4S single cluster domain 15 118 9.5E-9 T 28-03-2018 RK98_RS02445 842210657c8abebb7aec38b3b6f586dc 237 Gene3D G3DSA:3.80.30.20 21 215 3.1E-15 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe RK98_RS02445 842210657c8abebb7aec38b3b6f586dc 237 Pfam PF04055 Radical SAM superfamily 28 123 8.0E-12 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS02445 842210657c8abebb7aec38b3b6f586dc 237 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 3 237 1.7E-115 T 28-03-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 RK98_RS02445 842210657c8abebb7aec38b3b6f586dc 237 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 234 33.874 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 RK98_RS02445 842210657c8abebb7aec38b3b6f586dc 237 SUPERFAMILY SSF102114 23 114 6.41E-12 T 28-03-2018 RK98_RS05475 4cc54d6deec0019aa6eff38ca7f44171 381 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 362 8.6E-121 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 RK98_RS05475 4cc54d6deec0019aa6eff38ca7f44171 381 Gene3D G3DSA:3.40.50.2000 203 348 1.0E-36 T 28-03-2018 RK98_RS05475 4cc54d6deec0019aa6eff38ca7f44171 381 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 364 3.7E-156 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 RK98_RS05475 4cc54d6deec0019aa6eff38ca7f44171 381 Gene3D G3DSA:3.40.50.2000 2 202 1.0E-73 T 28-03-2018 RK98_RS05475 4cc54d6deec0019aa6eff38ca7f44171 381 SUPERFAMILY SSF53756 1 368 1.99E-135 T 28-03-2018 RK98_RS13195 001570d56483a38ab58fb677d75c5efb 120 Gene3D G3DSA:1.20.5.220 105 118 2.8E-5 T 28-03-2018 RK98_RS13195 001570d56483a38ab58fb677d75c5efb 120 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 72 80 1.2E-12 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RK98_RS13195 001570d56483a38ab58fb677d75c5efb 120 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 81 90 1.2E-12 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RK98_RS13195 001570d56483a38ab58fb677d75c5efb 120 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 1.2E-12 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RK98_RS13195 001570d56483a38ab58fb677d75c5efb 120 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 11 24 - T 28-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site RK98_RS13195 001570d56483a38ab58fb677d75c5efb 120 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 120 28.815 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RK98_RS13195 001570d56483a38ab58fb677d75c5efb 120 SUPERFAMILY SSF81330 10 113 2.88E-32 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RK98_RS13195 001570d56483a38ab58fb677d75c5efb 120 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 119 1.8E-37 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RK98_RS13195 001570d56483a38ab58fb677d75c5efb 120 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 116 6.9E-40 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 SMART SM00358 173 240 1.6E-19 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 Gene3D G3DSA:3.30.160.20 171 243 4.1E-20 T 28-03-2018 RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 Pfam PF00035 Double-stranded RNA binding motif 174 239 4.5E-16 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 SMART SM00535 32 167 7.7E-55 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 SUPERFAMILY SSF54768 161 241 5.97E-21 T 28-03-2018 RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 Gene3D G3DSA:1.10.1520.10 16 168 2.2E-42 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 SUPERFAMILY SSF69065 17 175 2.79E-50 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 Pfam PF14622 Ribonuclease-III-like 31 160 5.2E-36 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 ProSitePatterns PS00517 Ribonuclease III family signature. 56 64 - T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 22 239 4.0E-80 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 RK98_RS12565 ee8527144de27e52e5483a02e8528613 243 Hamap MF_00104 Ribonuclease 3 [rnc]. 20 236 29.963 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 RK98_RS03125 1e039c9c8efe90ad158842f2bdf008bc 276 SUPERFAMILY SSF53613 4 266 3.43E-67 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS03125 1e039c9c8efe90ad158842f2bdf008bc 276 Pfam PF08543 Phosphomethylpyrimidine kinase 13 259 1.4E-77 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 RK98_RS03125 1e039c9c8efe90ad158842f2bdf008bc 276 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 260 1.3E-70 T 28-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS03125 1e039c9c8efe90ad158842f2bdf008bc 276 Gene3D G3DSA:3.40.1190.20 1 276 1.2E-53 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS09455 81e6e22023a4422ecf02c6a8b17f4dac 285 Gene3D G3DSA:3.40.50.1000 1 18 0.042 T 28-03-2018 IPR023214 HAD-like domain RK98_RS09455 81e6e22023a4422ecf02c6a8b17f4dac 285 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 278 8.9E-51 T 28-03-2018 IPR000150 Cof family GO:0016787 RK98_RS09455 81e6e22023a4422ecf02c6a8b17f4dac 285 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 250 6.2E-23 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RK98_RS09455 81e6e22023a4422ecf02c6a8b17f4dac 285 Gene3D G3DSA:3.40.50.1000 19 284 2.5E-29 T 28-03-2018 IPR023214 HAD-like domain RK98_RS09455 81e6e22023a4422ecf02c6a8b17f4dac 285 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 278 2.4E-52 T 28-03-2018 IPR023214 HAD-like domain RK98_RS09455 81e6e22023a4422ecf02c6a8b17f4dac 285 SUPERFAMILY SSF56784 2 283 2.97E-57 T 28-03-2018 IPR023214 HAD-like domain RK98_RS14590 b285e7bb084f04e19effaafcd173d37d 422 Gene3D G3DSA:3.20.20.150 19 323 2.4E-7 T 28-03-2018 RK98_RS14590 b285e7bb084f04e19effaafcd173d37d 422 Pfam PF16325 Peptidase family U32 C-terminal domain 339 418 1.2E-24 T 28-03-2018 IPR032525 Peptidase family U32, C-terminal RK98_RS14590 b285e7bb084f04e19effaafcd173d37d 422 ProSitePatterns PS01276 Peptidase family U32 signature. 175 193 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RK98_RS14590 b285e7bb084f04e19effaafcd173d37d 422 Pfam PF01136 Peptidase family U32 90 321 1.2E-85 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 SUPERFAMILY SSF52540 340 806 2.77E-113 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 SUPERFAMILY SSF52540 5 179 2.77E-113 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 SUPERFAMILY SSF52540 848 874 2.77E-113 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 Gene3D G3DSA:3.40.50.300 5 468 4.3E-51 T 28-03-2018 RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 455 1.5E-80 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 Pfam PF13361 UvrD-like helicase C-terminal domain 466 869 2.9E-32 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 Gene3D G3DSA:3.40.50.300 469 1003 7.8E-48 T 28-03-2018 RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 SUPERFAMILY SSF52980 996 1214 1.98E-38 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1041 1210 7.9E-6 T 28-03-2018 RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 Gene3D G3DSA:3.90.320.10 1004 1216 1.4E-35 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 12 1214 0.0 T 28-03-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 RK98_RS11130 6ff7afda4e526e39cd039fa20db7f5b0 1217 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 9 1217 17.86 T 28-03-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 RK98_RS04605 8a499d1955c1f58382eb2e958f9b62ac 341 Gene3D G3DSA:3.40.50.720 2 340 7.1E-48 T 28-03-2018 RK98_RS04605 8a499d1955c1f58382eb2e958f9b62ac 341 SUPERFAMILY SSF51735 1 335 1.51E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS04605 8a499d1955c1f58382eb2e958f9b62ac 341 Pfam PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family 6 244 2.0E-25 T 28-03-2018 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase GO:0003854|GO:0006694|GO:0016616|GO:0055114 RK98_RS09530 4ebe2f14e497e3da028f0049f8e4eb0b 220 Pfam PF01791 DeoC/LacD family aldolase 4 208 3.7E-26 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RK98_RS09530 4ebe2f14e497e3da028f0049f8e4eb0b 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 37.383 T 28-03-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 RK98_RS09530 4ebe2f14e497e3da028f0049f8e4eb0b 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 4 212 3.1E-86 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RK98_RS09530 4ebe2f14e497e3da028f0049f8e4eb0b 220 PIRSF PIRSF001357 2 219 3.9E-78 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RK98_RS09530 4ebe2f14e497e3da028f0049f8e4eb0b 220 SMART SM01133 2 213 1.2E-98 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RK98_RS09530 4ebe2f14e497e3da028f0049f8e4eb0b 220 SUPERFAMILY SSF51569 2 213 1.47E-82 T 28-03-2018 RK98_RS09530 4ebe2f14e497e3da028f0049f8e4eb0b 220 Gene3D G3DSA:3.20.20.70 2 216 8.6E-96 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 Gene3D G3DSA:3.40.50.620 215 350 2.7E-8 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 Gene3D G3DSA:1.10.287.130 641 715 7.0E-9 T 28-03-2018 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 SUPERFAMILY SSF55874 711 876 1.13E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 Gene3D G3DSA:3.30.565.10 716 878 1.4E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 SUPERFAMILY SSF47384 644 721 2.75E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 Gene3D G3DSA:1.20.120.620 389 488 5.8E-18 T 28-03-2018 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 Pfam PF00512 His Kinase A (phospho-acceptor) domain 655 720 4.6E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 766 876 4.5E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 803 817 3.4E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 821 831 3.4E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 PRINTS PR00344 Bacterial sensor protein C-terminal signature 840 858 3.4E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 12 219 2.6E-78 T 28-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 Gene3D G3DSA:3.40.50.300 12 139 1.1E-15 T 28-03-2018 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 SUPERFAMILY SSF52402 238 349 6.53E-6 T 28-03-2018 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 SMART SM00387 765 880 5.0E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 SMART SM00388 653 721 4.6E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS09855 7db50e0d63bdb7430c8874aea4169e70 885 Pfam PF13493 Domain of unknown function (DUF4118) 388 493 2.1E-23 T 28-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain RK98_RS05310 4ca8fc0c85d2877837aa60e5ebf8cfdd 370 Gene3D G3DSA:2.40.50.100 158 209 0.56 T 28-03-2018 RK98_RS05310 4ca8fc0c85d2877837aa60e5ebf8cfdd 370 Gene3D G3DSA:2.40.50.100 28 77 0.18 T 28-03-2018 RK98_RS05310 4ca8fc0c85d2877837aa60e5ebf8cfdd 370 Gene3D G3DSA:2.40.50.100 78 157 9.1E-4 T 28-03-2018 RK98_RS03365 c0ac1d74e7a986080ff65a91d31764e9 47 ProSitePatterns PS00582 Ribosomal protein L33 signature. 16 34 - T 28-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03365 c0ac1d74e7a986080ff65a91d31764e9 47 SUPERFAMILY SSF57829 3 47 9.61E-14 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 RK98_RS03365 c0ac1d74e7a986080ff65a91d31764e9 47 Pfam PF00471 Ribosomal protein L33 3 47 2.2E-16 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS03365 c0ac1d74e7a986080ff65a91d31764e9 47 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 47 2.3E-14 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS03365 c0ac1d74e7a986080ff65a91d31764e9 47 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 47 15.755 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS07550 b9f3239ff157d26f2347e3bcdcaf78dc 130 PRINTS PR00502 NUDIX hydrolase family signature 47 62 5.6E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RK98_RS07550 b9f3239ff157d26f2347e3bcdcaf78dc 130 PRINTS PR00502 NUDIX hydrolase family signature 33 47 5.6E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RK98_RS07550 b9f3239ff157d26f2347e3bcdcaf78dc 130 SUPERFAMILY SSF55811 1 126 1.49E-30 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 RK98_RS07550 b9f3239ff157d26f2347e3bcdcaf78dc 130 Gene3D G3DSA:3.90.79.10 1 129 2.1E-26 T 28-03-2018 RK98_RS07550 b9f3239ff157d26f2347e3bcdcaf78dc 130 Pfam PF00293 NUDIX domain 7 119 2.8E-14 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 PRINTS PR00101 Aspartate carbamoyltransferase signature 72 81 1.2E-34 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 PRINTS PR00101 Aspartate carbamoyltransferase signature 249 254 1.2E-34 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 PRINTS PR00101 Aspartate carbamoyltransferase signature 206 215 1.2E-34 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 1.2E-34 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 PRINTS PR00101 Aspartate carbamoyltransferase signature 273 287 1.2E-34 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 PRINTS PR00101 Aspartate carbamoyltransferase signature 34 56 1.2E-34 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 SUPERFAMILY SSF53671 1 292 5.11E-87 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 292 1.4E-91 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 3 140 1.4E-43 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 Gene3D G3DSA:3.40.50.1370 153 293 1.3E-37 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 44 63 4.1E-23 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 4.1E-23 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 257 280 4.1E-23 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 245 254 4.1E-23 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 44 51 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 Gene3D G3DSA:3.40.50.1370 1 152 5.7E-57 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 293 37.812 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12395 590b0dd516934dd9db8dd47bb786ce40 293 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 288 9.0E-18 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 RK98_RS07525 0981c96e79d15855941af7ae946633d0 358 Pfam PF05977 Transmembrane secretion effector 9 349 2.0E-24 T 28-03-2018 IPR010290 Transmembrane secretion effector RK98_RS07525 0981c96e79d15855941af7ae946633d0 358 SUPERFAMILY SSF103473 8 354 6.93E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS07525 0981c96e79d15855941af7ae946633d0 358 Gene3D G3DSA:1.20.1250.20 204 358 2.5E-11 T 28-03-2018 RK98_RS07525 0981c96e79d15855941af7ae946633d0 358 Gene3D G3DSA:1.20.1250.20 4 203 5.4E-23 T 28-03-2018 RK98_RS11125 b0d681421b979f7ec2310d9d8655d874 1157 Gene3D G3DSA:3.40.50.300 1 119 4.6E-28 T 28-03-2018 RK98_RS11125 b0d681421b979f7ec2310d9d8655d874 1157 Gene3D G3DSA:3.40.50.300 120 258 7.1E-29 T 28-03-2018 RK98_RS11125 b0d681421b979f7ec2310d9d8655d874 1157 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1144 0.0 T 28-03-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 RK98_RS11125 b0d681421b979f7ec2310d9d8655d874 1157 SUPERFAMILY SSF52540 296 686 9.74E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11125 b0d681421b979f7ec2310d9d8655d874 1157 Gene3D G3DSA:3.40.50.300 259 686 5.7E-34 T 28-03-2018 RK98_RS11125 b0d681421b979f7ec2310d9d8655d874 1157 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1154 53.135 T 28-03-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 RK98_RS11125 b0d681421b979f7ec2310d9d8655d874 1157 Gene3D G3DSA:3.90.320.10 688 990 4.2E-12 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 RK98_RS11125 b0d681421b979f7ec2310d9d8655d874 1157 Pfam PF13361 UvrD-like helicase C-terminal domain 284 656 3.7E-16 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RK98_RS11125 b0d681421b979f7ec2310d9d8655d874 1157 Pfam PF12705 PD-(D/E)XK nuclease superfamily 773 1122 2.9E-50 T 28-03-2018 RK98_RS04995 ef30c0dd071fbf6eef000574261a2141 341 Gene3D G3DSA:3.40.50.720 210 280 0.0036 T 28-03-2018 RK98_RS04995 ef30c0dd071fbf6eef000574261a2141 341 SUPERFAMILY SSF50129 24 173 6.76E-18 T 28-03-2018 IPR011032 GroES-like RK98_RS04995 ef30c0dd071fbf6eef000574261a2141 341 Gene3D G3DSA:3.90.180.10 6 209 3.8E-19 T 28-03-2018 RK98_RS04995 ef30c0dd071fbf6eef000574261a2141 341 Hamap MF_02069 Ribulose-5-phosphate reductase [tarJ]. 1 341 59.416 T 28-03-2018 IPR034710 Ribulose-5-phosphate reductase GO:0050256 RK98_RS04995 ef30c0dd071fbf6eef000574261a2141 341 Pfam PF00107 Zinc-binding dehydrogenase 216 293 2.2E-8 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RK98_RS04995 ef30c0dd071fbf6eef000574261a2141 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 130 5.9E-7 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RK98_RS04995 ef30c0dd071fbf6eef000574261a2141 341 SUPERFAMILY SSF51735 142 295 3.51E-11 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS02675 82215cc3af86e4f43566ce66280cc3a8 265 Gene3D G3DSA:3.10.350.10 22 81 3.4E-17 T 28-03-2018 RK98_RS02675 82215cc3af86e4f43566ce66280cc3a8 265 Gene3D G3DSA:3.10.350.10 82 151 6.3E-17 T 28-03-2018 RK98_RS02675 82215cc3af86e4f43566ce66280cc3a8 265 Pfam PF01476 LysM domain 91 133 4.5E-13 T 28-03-2018 IPR018392 LysM domain RK98_RS02675 82215cc3af86e4f43566ce66280cc3a8 265 Pfam PF01476 LysM domain 29 70 2.9E-13 T 28-03-2018 IPR018392 LysM domain RK98_RS02675 82215cc3af86e4f43566ce66280cc3a8 265 SUPERFAMILY SSF54106 27 70 4.84E-12 T 28-03-2018 IPR018392 LysM domain RK98_RS02675 82215cc3af86e4f43566ce66280cc3a8 265 SUPERFAMILY SSF54001 144 264 2.06E-20 T 28-03-2018 RK98_RS02675 82215cc3af86e4f43566ce66280cc3a8 265 SUPERFAMILY SSF54106 89 133 4.71E-11 T 28-03-2018 IPR018392 LysM domain RK98_RS02675 82215cc3af86e4f43566ce66280cc3a8 265 SMART SM00257 90 133 1.5E-14 T 28-03-2018 IPR018392 LysM domain RK98_RS02675 82215cc3af86e4f43566ce66280cc3a8 265 SMART SM00257 28 71 3.8E-14 T 28-03-2018 IPR018392 LysM domain RK98_RS02675 82215cc3af86e4f43566ce66280cc3a8 265 Pfam PF05257 CHAP domain 159 240 5.4E-15 T 28-03-2018 IPR007921 CHAP domain RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 295 2.9E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 SUPERFAMILY SSF55424 319 437 4.64E-26 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 7.3E-23 T 28-03-2018 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 7.3E-23 T 28-03-2018 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 7.3E-23 T 28-03-2018 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 7.3E-23 T 28-03-2018 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 7.3E-23 T 28-03-2018 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 2.7E-12 T 28-03-2018 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 231 245 2.7E-12 T 28-03-2018 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 2.7E-12 T 28-03-2018 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 2.7E-12 T 28-03-2018 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 SUPERFAMILY SSF51905 1 311 1.3E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 Hamap MF_01608 Coenzyme A disulfide reductase [cdr]. 1 438 68.16 T 28-03-2018 IPR023536 Coenzyme A disulphide reductase, staphyolococci GO:0050451|GO:0055114 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 Gene3D G3DSA:3.30.390.30 322 438 1.1E-18 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 Gene3D G3DSA:3.40.50.720 143 314 3.1E-27 T 28-03-2018 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 326 424 5.5E-10 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 TIGRFAM TIGR03385 CoA_CoA_reduc: CoA-disulfide reductase 3 434 7.3E-208 T 28-03-2018 IPR017758 Coenzyme A disulphide reductase GO:0003756|GO:0050451|GO:0050660|GO:0050661|GO:0055114 RK98_RS11145 304b201f07bf0763a49cc7a42f36e65c 438 Gene3D G3DSA:3.50.50.60 2 138 3.9E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS00105 046c8cd1edc37b13a059dc279469f6ae 407 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 373 6.7E-119 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 RK98_RS00105 046c8cd1edc37b13a059dc279469f6ae 407 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 370 8.9E-61 T 28-03-2018 IPR020536 Thil, AANH domain GO:0004810 RK98_RS00105 046c8cd1edc37b13a059dc279469f6ae 407 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 407 159.2 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 RK98_RS00105 046c8cd1edc37b13a059dc279469f6ae 407 Gene3D G3DSA:3.30.70.1510 5 81 2.2E-24 T 28-03-2018 RK98_RS00105 046c8cd1edc37b13a059dc279469f6ae 407 SMART SM00981 75 165 1.4E-21 T 28-03-2018 IPR004114 THUMP domain GO:0003723 RK98_RS00105 046c8cd1edc37b13a059dc279469f6ae 407 Pfam PF02926 THUMP domain 42 162 1.8E-17 T 28-03-2018 IPR004114 THUMP domain GO:0003723 RK98_RS00105 046c8cd1edc37b13a059dc279469f6ae 407 SUPERFAMILY SSF52402 174 385 2.65E-50 T 28-03-2018 RK98_RS00105 046c8cd1edc37b13a059dc279469f6ae 407 Gene3D G3DSA:3.30.2300.10 82 163 6.9E-20 T 28-03-2018 RK98_RS00105 046c8cd1edc37b13a059dc279469f6ae 407 SUPERFAMILY SSF143437 3 173 3.14E-49 T 28-03-2018 RK98_RS00105 046c8cd1edc37b13a059dc279469f6ae 407 Gene3D G3DSA:3.40.50.620 175 403 1.1E-31 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS11420 1d5e7324795e7d28277964ddffed6ae6 189 Pfam PF06338 ComK protein 6 156 1.8E-50 T 28-03-2018 IPR010461 Competence protein ComK GO:0030420 RK98_RS11420 1d5e7324795e7d28277964ddffed6ae6 189 PIRSF PIRSF011560 1 189 1.9E-74 T 28-03-2018 IPR010461 Competence protein ComK GO:0030420 RK98_RS12780 85eb0f926fa273a7e5b5a2c74d0685f1 89 Gene3D G3DSA:1.10.287.10 2 89 3.1E-36 T 28-03-2018 RK98_RS12780 85eb0f926fa273a7e5b5a2c74d0685f1 89 Pfam PF00312 Ribosomal protein S15 8 88 4.6E-38 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12780 85eb0f926fa273a7e5b5a2c74d0685f1 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 2.1E-40 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12780 85eb0f926fa273a7e5b5a2c74d0685f1 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.812 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12780 85eb0f926fa273a7e5b5a2c74d0685f1 89 SMART SM01387 8 88 4.0E-52 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12780 85eb0f926fa273a7e5b5a2c74d0685f1 89 SUPERFAMILY SSF47060 3 89 6.18E-37 T 28-03-2018 IPR009068 S15/NS1, RNA-binding RK98_RS12780 85eb0f926fa273a7e5b5a2c74d0685f1 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 3.0E-39 T 28-03-2018 RK98_RS12780 85eb0f926fa273a7e5b5a2c74d0685f1 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS05455 be9c499c4d99580222038a1577be4ed2 319 SUPERFAMILY SSF160240 231 303 4.84E-8 T 28-03-2018 RK98_RS05455 be9c499c4d99580222038a1577be4ed2 319 Gene3D G3DSA:1.20.1510.10 26 224 8.1E-61 T 28-03-2018 RK98_RS05455 be9c499c4d99580222038a1577be4ed2 319 Gene3D G3DSA:3.30.70.1350 226 307 3.3E-12 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain RK98_RS05455 be9c499c4d99580222038a1577be4ed2 319 SUPERFAMILY SSF161111 26 225 2.88E-60 T 28-03-2018 RK98_RS05455 be9c499c4d99580222038a1577be4ed2 319 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 28 304 2.8E-92 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RK98_RS05455 be9c499c4d99580222038a1577be4ed2 319 Pfam PF01545 Cation efflux family 31 224 7.3E-52 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 SUPERFAMILY SSF51735 3 179 1.89E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 4.0E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 4.0E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 4.0E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 4.0E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 4.0E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 4.0E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 Gene3D G3DSA:1.10.1040.10 181 331 8.8E-58 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 SUPERFAMILY SSF48179 180 332 2.55E-59 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 Gene3D G3DSA:3.40.50.720 1 180 5.0E-39 T 28-03-2018 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 323 36.209 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 PIRSF PIRSF000114 1 332 5.4E-113 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 321 8.1E-57 T 28-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 160 1.5E-51 T 28-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS13875 b125b8405907a8fe9d8fbe6ce42dbbe3 332 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 RK98_RS00420 8dea1aead77ab03e24bc618393e7f6f7 500 Gene3D G3DSA:3.50.50.60 190 497 1.4E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS00420 8dea1aead77ab03e24bc618393e7f6f7 500 Pfam PF13454 FAD-NAD(P)-binding 4 158 1.3E-31 T 28-03-2018 RK98_RS00420 8dea1aead77ab03e24bc618393e7f6f7 500 SUPERFAMILY SSF51905 1 244 5.05E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS00420 8dea1aead77ab03e24bc618393e7f6f7 500 Gene3D G3DSA:3.40.50.20 1 168 0.001 T 28-03-2018 RK98_RS10940 b2257c6cfff8d89b5ee727f59f89c2f3 319 SUPERFAMILY SSF51735 101 288 2.59E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS10940 b2257c6cfff8d89b5ee727f59f89c2f3 319 SUPERFAMILY SSF52283 3 134 4.35E-35 T 28-03-2018 RK98_RS10940 b2257c6cfff8d89b5ee727f59f89c2f3 319 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 1.7E-30 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RK98_RS10940 b2257c6cfff8d89b5ee727f59f89c2f3 319 Gene3D G3DSA:3.40.50.720 1 114 1.0E-33 T 28-03-2018 RK98_RS10940 b2257c6cfff8d89b5ee727f59f89c2f3 319 Gene3D G3DSA:3.40.50.720 115 290 4.2E-52 T 28-03-2018 RK98_RS10940 b2257c6cfff8d89b5ee727f59f89c2f3 319 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 287 7.7E-62 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RK98_RS10940 b2257c6cfff8d89b5ee727f59f89c2f3 319 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK98_RS09235 a0083de67771be653489d65cc88fdcb9 333 SMART SM00829 17 329 1.9E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RK98_RS09235 a0083de67771be653489d65cc88fdcb9 333 Gene3D G3DSA:3.90.180.10 1 146 1.6E-35 T 28-03-2018 RK98_RS09235 a0083de67771be653489d65cc88fdcb9 333 SUPERFAMILY SSF51735 122 296 8.49E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS09235 a0083de67771be653489d65cc88fdcb9 333 SUPERFAMILY SSF50129 2 141 3.28E-37 T 28-03-2018 IPR011032 GroES-like RK98_RS09235 a0083de67771be653489d65cc88fdcb9 333 Gene3D G3DSA:3.40.50.720 147 273 1.5E-27 T 28-03-2018 RK98_RS09235 a0083de67771be653489d65cc88fdcb9 333 Pfam PF00107 Zinc-binding dehydrogenase 156 290 4.3E-20 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RK98_RS09235 a0083de67771be653489d65cc88fdcb9 333 Pfam PF16884 N-terminal domain of oxidoreductase 4 111 4.0E-34 T 28-03-2018 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 SUPERFAMILY SSF52440 3 112 7.91E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 Gene3D G3DSA:3.40.50.20 1 122 1.5E-51 T 28-03-2018 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 SMART SM00878 334 443 1.2E-48 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 Pfam PF02785 Biotin carboxylase C-terminal domain 334 443 1.8E-35 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 313 3.1E-64 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 109 2.3E-44 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 SUPERFAMILY SSF56059 82 350 4.6E-67 T 28-03-2018 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 Gene3D G3DSA:3.30.1490.20 123 208 2.7E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 SUPERFAMILY SSF51246 329 445 5.76E-36 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 RK98_RS14560 96e3ac84eb95245eadcafb49c71052b9 453 Gene3D G3DSA:3.30.470.20 209 446 1.6E-84 T 28-03-2018 RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 Pfam PF00581 Rhodanese-like domain 15 98 2.9E-15 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 SMART SM00450 10 102 1.6E-17 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 Gene3D G3DSA:3.40.1260.10 194 354 8.2E-51 T 28-03-2018 RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 Gene3D G3DSA:3.40.250.10 3 100 7.6E-23 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 Pfam PF13686 DsrE/DsrF/DrsH-like family 200 353 7.4E-58 T 28-03-2018 IPR032836 DsrE2-like family RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 SUPERFAMILY SSF75169 202 246 6.08E-19 T 28-03-2018 IPR027396 DsrEFH-like RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 SUPERFAMILY SSF75169 296 347 6.08E-19 T 28-03-2018 IPR027396 DsrEFH-like RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 SUPERFAMILY SSF64307 97 187 4.97E-19 T 28-03-2018 IPR001455 TusA-like domain RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 Pfam PF01206 Sulfurtransferase TusA 119 187 1.3E-16 T 28-03-2018 IPR001455 TusA-like domain RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 Gene3D G3DSA:3.30.110.40 101 188 7.4E-24 T 28-03-2018 IPR001455 TusA-like domain RK98_RS05885 47e665f55c0ddef398ca72cc010d0fe0 354 SUPERFAMILY SSF52821 18 99 4.06E-25 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 9.1E-223 T 28-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.1E-81 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 Gene3D G3DSA:3.30.470.20 203 445 3.2E-99 T 28-03-2018 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 SMART SM00878 336 442 7.3E-60 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 SUPERFAMILY SSF56059 82 350 6.4E-70 T 28-03-2018 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 SUPERFAMILY SSF52440 1 112 1.87E-47 T 28-03-2018 IPR016185 Pre-ATP-grasp domain RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 Pfam PF02785 Biotin carboxylase C-terminal domain 336 443 2.9E-37 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 Gene3D G3DSA:3.40.50.20 1 127 4.3E-49 T 28-03-2018 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 SUPERFAMILY SSF51246 331 443 4.24E-43 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 1.5E-43 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 RK98_RS14165 ce3ee43b27896ff0bebfbe50dc5d41df 451 Gene3D G3DSA:3.30.1490.20 128 200 2.7E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RK98_RS09210 9eaa1601b9b7a7fdd62f220ba6a840b0 326 TIGRFAM TIGR01232 lacD: tagatose 1,6-diphosphate aldolase 2 326 4.2E-217 T 28-03-2018 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 RK98_RS09210 9eaa1601b9b7a7fdd62f220ba6a840b0 326 SUPERFAMILY SSF51569 7 322 1.98E-68 T 28-03-2018 RK98_RS09210 9eaa1601b9b7a7fdd62f220ba6a840b0 326 Gene3D G3DSA:3.20.20.70 4 326 2.9E-82 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS09210 9eaa1601b9b7a7fdd62f220ba6a840b0 326 SMART SM01133 21 283 7.0E-32 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RK98_RS09210 9eaa1601b9b7a7fdd62f220ba6a840b0 326 Pfam PF01791 DeoC/LacD family aldolase 21 282 1.8E-78 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RK98_RS09210 9eaa1601b9b7a7fdd62f220ba6a840b0 326 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 326 210.57 T 28-03-2018 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 RK98_RS11970 0e62dfedbf15d2d229b3fc18c8a346ae 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 1.3E-28 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS11970 0e62dfedbf15d2d229b3fc18c8a346ae 57 Pfam PF01783 Ribosomal L32p protein family 2 56 1.0E-27 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS11970 0e62dfedbf15d2d229b3fc18c8a346ae 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 20.561 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS11970 0e62dfedbf15d2d229b3fc18c8a346ae 57 SUPERFAMILY SSF57829 1 54 7.94E-24 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 RK98_RS11970 0e62dfedbf15d2d229b3fc18c8a346ae 57 Gene3D G3DSA:2.20.28.20 24 54 0.0011 T 28-03-2018 RK98_RS14495 04997d0de3e97779e6c9fe41e6033262 194 Pfam PF01966 HD domain 18 130 3.1E-11 T 28-03-2018 IPR006674 HD domain RK98_RS14495 04997d0de3e97779e6c9fe41e6033262 194 SMART SM00471 14 141 1.2E-7 T 28-03-2018 IPR003607 HD/PDEase domain RK98_RS14495 04997d0de3e97779e6c9fe41e6033262 194 SUPERFAMILY SSF109604 6 164 1.14E-28 T 28-03-2018 RK98_RS14495 04997d0de3e97779e6c9fe41e6033262 194 Gene3D G3DSA:1.10.3210.10 1 189 4.2E-24 T 28-03-2018 RK98_RS14495 04997d0de3e97779e6c9fe41e6033262 194 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 11 182 1.8E-41 T 28-03-2018 IPR005249 Conserved hypothetical protein CHP00488 RK98_RS14145 1e6441726caa2cc4e3f73f3ec43fd150 76 SUPERFAMILY SSF116842 2 69 4.45E-21 T 28-03-2018 RK98_RS14145 1e6441726caa2cc4e3f73f3ec43fd150 76 Pfam PF02609 Exonuclease VII small subunit 8 58 1.9E-21 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RK98_RS14145 1e6441726caa2cc4e3f73f3ec43fd150 76 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 63 1.4E-23 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RK98_RS14145 1e6441726caa2cc4e3f73f3ec43fd150 76 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 4 49 1.0E-19 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RK98_RS14145 1e6441726caa2cc4e3f73f3ec43fd150 76 PIRSF PIRSF006488 1 76 4.5E-23 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RK98_RS14145 1e6441726caa2cc4e3f73f3ec43fd150 76 Gene3D G3DSA:1.10.287.1040 5 68 2.2E-23 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RK98_RS14145 1e6441726caa2cc4e3f73f3ec43fd150 76 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 7 67 15.933 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 RK98_RS09440 928d94f8cccd4b746a7237eca35ada75 512 Gene3D G3DSA:3.40.50.2300 406 512 1.2E-19 T 28-03-2018 RK98_RS09440 928d94f8cccd4b746a7237eca35ada75 512 Pfam PF02378 Phosphotransferase system, EIIC 23 283 2.3E-15 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS09440 928d94f8cccd4b746a7237eca35ada75 512 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 13 351 7.8E-178 T 28-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 RK98_RS09440 928d94f8cccd4b746a7237eca35ada75 512 SUPERFAMILY SSF52794 419 508 2.27E-25 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS09440 928d94f8cccd4b746a7237eca35ada75 512 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 421 504 4.2E-11 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 83 97 8.8E-58 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 130 146 8.8E-58 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 40 56 8.8E-58 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 8.8E-58 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 56 77 8.8E-58 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 99 112 8.8E-58 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 8.8E-58 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 255 274 8.8E-58 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 300 326 8.8E-58 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 Gene3D G3DSA:3.40.190.10 155 294 1.0E-32 T 28-03-2018 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 Pfam PF13416 Bacterial extracellular solute-binding protein 49 321 4.6E-36 T 28-03-2018 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 Gene3D G3DSA:3.40.190.10 33 154 3.4E-22 T 28-03-2018 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 SUPERFAMILY SSF53850 35 353 2.01E-90 T 28-03-2018 RK98_RS11835 3e8e6d90f496ed55c9ffea1b64753516 357 PIRSF PIRSF019574 1 356 6.8E-139 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 361 429 4.3E-31 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 213 227 5.8E-53 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 149 169 5.8E-53 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 247 274 5.8E-53 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 410 429 5.8E-53 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 181 195 5.8E-53 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 Pfam PF11638 DnaA N-terminal domain 5 64 3.1E-7 T 28-03-2018 IPR024633 DnaA N-terminal domain RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 ProSitePatterns PS01008 DnaA protein signature. 410 429 - T 28-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 7 450 3.1E-179 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 Gene3D G3DSA:1.10.8.60 282 353 5.5E-31 T 28-03-2018 RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 4 451 33.761 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 Gene3D G3DSA:1.10.1750.10 354 451 5.8E-38 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 Pfam PF00308 Bacterial dnaA protein 117 332 7.1E-102 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 SMART SM00382 148 276 7.7E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 SUPERFAMILY SSF52540 116 327 9.58E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 SMART SM00760 360 429 6.0E-42 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 SUPERFAMILY SSF48295 347 452 9.68E-38 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 RK98_RS06325 6857fe9b88e97dfd7d6af80554706eaa 453 Gene3D G3DSA:3.40.50.300 113 280 2.0E-22 T 28-03-2018 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 PIRSF PIRSF000850 325 389 2.5 T 28-03-2018 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 PIRSF PIRSF000850 108 288 0.0016 T 28-03-2018 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 PIRSF PIRSF000850 386 472 0.15 T 28-03-2018 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 Pfam PF13396 Phospholipase_D-nuclease N-terminal 25 68 5.0E-11 T 28-03-2018 IPR027379 Cardiolipin synthase N-terminal RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 Hamap MF_01916 Cardiolipin synthase. 21 494 43.813 T 28-03-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 SMART SM00155 407 434 3.1E-7 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 SMART SM00155 229 256 4.8E-6 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 SUPERFAMILY SSF56024 281 481 1.46E-52 T 28-03-2018 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 SUPERFAMILY SSF56024 94 325 2.69E-54 T 28-03-2018 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 Gene3D G3DSA:3.30.870.10 109 298 7.6E-34 T 28-03-2018 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 Pfam PF13091 PLD-like domain 146 273 4.3E-14 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 Pfam PF13091 PLD-like domain 335 460 2.1E-29 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 Gene3D G3DSA:3.30.870.10 321 488 1.7E-33 T 28-03-2018 RK98_RS09800 3d633a0781e599e9d8960a9e93a53841 494 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 15 494 8.2E-248 T 28-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 RK98_RS02205 d5f908bbcef3ba35f3958750ac29456d 190 Gene3D G3DSA:3.30.160.100 2 100 4.7E-28 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RK98_RS02205 d5f908bbcef3ba35f3958750ac29456d 190 SUPERFAMILY SSF69754 4 113 1.02E-30 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RK98_RS02205 d5f908bbcef3ba35f3958750ac29456d 190 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 4 102 9.0E-30 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RK98_RS02205 d5f908bbcef3ba35f3958750ac29456d 190 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 129 184 6.1E-28 T 28-03-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal RK98_RS02205 d5f908bbcef3ba35f3958750ac29456d 190 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 2 188 25.206 T 28-03-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid RK98_RS02205 d5f908bbcef3ba35f3958750ac29456d 190 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 96 3.7E-26 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 3.8E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 Pfam PF00072 Response regulator receiver domain 4 116 1.8E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 SUPERFAMILY SSF52172 1 131 9.82E-35 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 SMART SM00448 2 116 9.1E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 3.7E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 3.7E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 3.7E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 Gene3D G3DSA:1.10.10.10 128 207 2.1E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 SUPERFAMILY SSF46894 134 207 1.36E-23 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 SMART SM00421 144 201 1.5E-26 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS00870 c65cd2aa42dd966bce7bea24c69bb842 207 Gene3D G3DSA:3.40.50.2300 2 127 9.3E-35 T 28-03-2018 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 Pfam PF00575 S1 RNA binding domain 133 196 2.7E-5 T 28-03-2018 IPR003029 S1 domain GO:0003676 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 SUPERFAMILY SSF54814 200 278 6.08E-29 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 SUPERFAMILY SSF54814 279 342 1.18E-15 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 Pfam PF08529 NusA N-terminal domain 5 125 3.0E-38 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 Gene3D G3DSA:3.30.300.20 199 276 1.3E-33 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 Gene3D G3DSA:2.40.50.140 137 198 1.8E-11 T 28-03-2018 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 342 1.2E-122 T 28-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 Gene3D G3DSA:3.30.1480.10 2 130 5.9E-44 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 Gene3D G3DSA:3.30.300.20 278 348 4.5E-16 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 Pfam PF13184 NusA-like KH domain 230 297 9.2E-28 T 28-03-2018 IPR025249 KH domain, NusA-like GO:0003723 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 SMART SM00322 230 302 0.38 T 28-03-2018 IPR004087 K Homology domain GO:0003676 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 SMART SM00322 303 375 0.8 T 28-03-2018 IPR004087 K Homology domain GO:0003676 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 3 390 29.006 T 28-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 SUPERFAMILY SSF69705 4 126 1.96E-38 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 SMART SM00316 134 200 2.5E-6 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS12745 36fb58acc3bd53a04e77048564790915 391 SUPERFAMILY SSF50249 133 199 1.35E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS08405 716269bd776f3a685d5d248025d4e2fd 202 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 2 187 1.1E-46 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RK98_RS08405 716269bd776f3a685d5d248025d4e2fd 202 SUPERFAMILY SSF50486 2 193 1.26E-56 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RK98_RS08405 716269bd776f3a685d5d248025d4e2fd 202 Gene3D G3DSA:3.10.300.10 1 195 9.3E-56 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RK98_RS08405 716269bd776f3a685d5d248025d4e2fd 202 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 1 187 31.428 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RK98_RS08405 716269bd776f3a685d5d248025d4e2fd 202 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 3 184 1.9E-47 T 28-03-2018 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RK98_RS13420 38bceebade988fce57d47c9e730fe7de 308 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 23 304 8.0E-80 T 28-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 RK98_RS13420 38bceebade988fce57d47c9e730fe7de 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 305 9.3E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS13420 38bceebade988fce57d47c9e730fe7de 308 SUPERFAMILY SSF161098 29 301 4.58E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS13420 38bceebade988fce57d47c9e730fe7de 308 Gene3D G3DSA:1.10.3720.10 16 299 1.2E-39 T 28-03-2018 RK98_RS13405 89cdeb357a60378a2300467fe2d17c0f 213 Gene3D G3DSA:1.20.58.220 115 213 1.6E-20 T 28-03-2018 RK98_RS13405 89cdeb357a60378a2300467fe2d17c0f 213 PIRSF PIRSF003107 1 213 2.1E-62 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RK98_RS13405 89cdeb357a60378a2300467fe2d17c0f 213 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 6 210 1.3E-67 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 RK98_RS13405 89cdeb357a60378a2300467fe2d17c0f 213 SUPERFAMILY SSF109755 5 212 1.78E-53 T 28-03-2018 RK98_RS13405 89cdeb357a60378a2300467fe2d17c0f 213 Pfam PF01895 PhoU domain 121 202 3.1E-18 T 28-03-2018 IPR026022 PhoU domain RK98_RS13405 89cdeb357a60378a2300467fe2d17c0f 213 Pfam PF01895 PhoU domain 19 106 1.1E-17 T 28-03-2018 IPR026022 PhoU domain RK98_RS13405 89cdeb357a60378a2300467fe2d17c0f 213 Gene3D G3DSA:1.20.58.220 1 114 2.0E-20 T 28-03-2018 RK98_RS09980 61c725c06ab0e6c32745a81e36adbea9 422 Gene3D G3DSA:3.40.1020.10 233 422 1.2E-33 T 28-03-2018 RK98_RS09980 61c725c06ab0e6c32745a81e36adbea9 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 22 316 1.1E-71 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS09980 61c725c06ab0e6c32745a81e36adbea9 422 SUPERFAMILY SSF53686 10 366 2.49E-95 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS09980 61c725c06ab0e6c32745a81e36adbea9 422 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 47 60 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RK98_RS09980 61c725c06ab0e6c32745a81e36adbea9 422 TIGRFAM TIGR02079 THD1: threonine dehydratase 10 422 4.2E-185 T 28-03-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RK98_RS09980 61c725c06ab0e6c32745a81e36adbea9 422 Gene3D G3DSA:3.40.50.1100 19 178 5.6E-38 T 28-03-2018 RK98_RS09980 61c725c06ab0e6c32745a81e36adbea9 422 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 421 4.9E-21 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RK98_RS09980 61c725c06ab0e6c32745a81e36adbea9 422 SUPERFAMILY SSF55021 339 417 5.95E-10 T 28-03-2018 RK98_RS15035 9cad2463640061ce0911eea6431b6a2f 234 SUPERFAMILY SSF52172 2 129 1.85E-43 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS15035 9cad2463640061ce0911eea6431b6a2f 234 SMART SM00862 152 228 8.0E-31 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS15035 9cad2463640061ce0911eea6431b6a2f 234 Gene3D G3DSA:1.10.10.10 126 234 2.8E-32 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS15035 9cad2463640061ce0911eea6431b6a2f 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 228 1.0E-29 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS15035 9cad2463640061ce0911eea6431b6a2f 234 Pfam PF00072 Response regulator receiver domain 5 114 1.4E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS15035 9cad2463640061ce0911eea6431b6a2f 234 Gene3D G3DSA:3.40.50.2300 2 125 2.8E-38 T 28-03-2018 RK98_RS15035 9cad2463640061ce0911eea6431b6a2f 234 SMART SM00448 3 114 4.1E-48 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS15035 9cad2463640061ce0911eea6431b6a2f 234 SUPERFAMILY SSF46894 131 229 2.18E-31 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RK98_RS14180 dcdd09398a25aa3d50acfd5640e5d45f 353 Pfam PF00557 Metallopeptidase family M24 134 336 7.0E-69 T 28-03-2018 IPR000994 Peptidase M24 RK98_RS14180 dcdd09398a25aa3d50acfd5640e5d45f 353 Gene3D G3DSA:3.90.230.10 111 352 2.2E-80 T 28-03-2018 RK98_RS14180 dcdd09398a25aa3d50acfd5640e5d45f 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 125 4.3E-24 T 28-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 RK98_RS14180 dcdd09398a25aa3d50acfd5640e5d45f 353 Gene3D G3DSA:3.40.350.10 1 110 3.9E-28 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RK98_RS14180 dcdd09398a25aa3d50acfd5640e5d45f 353 SUPERFAMILY SSF53092 1 124 4.76E-22 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal RK98_RS14180 dcdd09398a25aa3d50acfd5640e5d45f 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 282 294 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RK98_RS14180 dcdd09398a25aa3d50acfd5640e5d45f 353 SUPERFAMILY SSF55920 82 347 3.14E-80 T 28-03-2018 IPR000994 Peptidase M24 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 Gene3D G3DSA:3.40.50.1970 440 651 6.2E-49 T 28-03-2018 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 726 746 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 SUPERFAMILY SSF53720 21 462 7.59E-82 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 Gene3D G3DSA:3.40.309.10 244 415 7.6E-28 T 28-03-2018 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 Gene3D G3DSA:1.20.1090.10 652 869 5.1E-61 T 28-03-2018 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 Gene3D G3DSA:3.40.605.10 11 243 1.3E-28 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 SUPERFAMILY SSF56796 458 865 2.62E-114 T 28-03-2018 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 Pfam PF00171 Aldehyde dehydrogenase family 21 412 2.2E-26 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 PIRSF PIRSF000111 4 869 0.0 T 28-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 Pfam PF00465 Iron-containing alcohol dehydrogenase 467 854 1.0E-112 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 RK98_RS05555 cbc42cf256b7fe742c9cc0cf14f7f267 869 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 640 668 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 SMART SM00861 353 524 6.3E-58 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 SUPERFAMILY SSF52922 534 662 6.54E-40 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 Gene3D G3DSA:3.40.50.970 360 531 8.9E-41 T 28-03-2018 RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 SUPERFAMILY SSF52518 343 525 1.77E-61 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 Pfam PF02780 Transketolase, C-terminal domain 548 655 2.0E-9 T 28-03-2018 IPR033248 Transketolase, C-terminal domain RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 SUPERFAMILY SSF52518 5 324 2.72E-106 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 Pfam PF02779 Transketolase, pyrimidine binding domain 358 523 3.0E-39 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 337 6.8E-140 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 Gene3D G3DSA:3.40.50.920 538 662 6.2E-29 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 Gene3D G3DSA:3.40.50.970 2 359 2.1E-98 T 28-03-2018 RK98_RS13165 f39d0f44049987f1d56e9644b2c926fd 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 661 5.9E-276 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 RK98_RS01370 cbda13b0330371177605b545f2e060e9 108 Pfam PF09022 Staphostatin A 1 105 2.4E-58 T 28-03-2018 IPR015112 Staphostatin A RK98_RS01370 cbda13b0330371177605b545f2e060e9 108 SUPERFAMILY SSF50882 1 107 3.4E-56 T 28-03-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 RK98_RS01370 cbda13b0330371177605b545f2e060e9 108 Gene3D G3DSA:2.40.310.10 1 103 2.5E-47 T 28-03-2018 IPR014728 Staphostatin A/B GO:0004869|GO:0005737 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 1.2E-6 T 28-03-2018 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.2E-6 T 28-03-2018 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 PIRSF PIRSF000171 341 573 6.0E-15 T 28-03-2018 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 PIRSF PIRSF000171 1 240 2.4E-18 T 28-03-2018 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 SUPERFAMILY SSF46977 444 579 5.76E-43 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 Gene3D G3DSA:3.50.50.60 2 445 9.4E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 SUPERFAMILY SSF56425 231 353 2.39E-31 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 SUPERFAMILY SSF51905 3 247 2.98E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 SUPERFAMILY SSF51905 357 426 2.98E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 Gene3D G3DSA:1.20.58.100 446 547 5.9E-25 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 6.5E-8 T 28-03-2018 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.5E-8 T 28-03-2018 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 2.2E-41 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 7.1E-293 T 28-03-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 Gene3D G3DSA:4.10.80.40 548 579 1.7E-5 T 28-03-2018 RK98_RS12095 ee8dd27c901d6d0853fffd30c5cd330f 588 Pfam PF00890 FAD binding domain 6 392 2.9E-84 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 RK98_RS12450 9367aa9c38da626122f66e69f3712498 399 Pfam PF02441 Flavoprotein 2 173 2.5E-47 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RK98_RS12450 9367aa9c38da626122f66e69f3712498 399 Gene3D G3DSA:3.40.50.1950 1 181 7.1E-55 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RK98_RS12450 9367aa9c38da626122f66e69f3712498 399 SUPERFAMILY SSF102645 186 398 1.31E-69 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 RK98_RS12450 9367aa9c38da626122f66e69f3712498 399 Gene3D G3DSA:3.40.50.10300 182 399 5.0E-65 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 RK98_RS12450 9367aa9c38da626122f66e69f3712498 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 394 5.5E-144 T 28-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 RK98_RS12450 9367aa9c38da626122f66e69f3712498 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 188 368 2.9E-69 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 RK98_RS12450 9367aa9c38da626122f66e69f3712498 399 SUPERFAMILY SSF52507 2 177 2.22E-61 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 RK98_RS09620 e22fa5e7dbce69228e0face99df3478c 84 SUPERFAMILY SSF143800 1 80 2.75E-24 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09620 e22fa5e7dbce69228e0face99df3478c 84 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 4.9E-20 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS09620 e22fa5e7dbce69228e0face99df3478c 84 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 27.54 T 28-03-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS09620 e22fa5e7dbce69228e0face99df3478c 84 Pfam PF01197 Ribosomal protein L31 1 79 6.1E-28 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS09620 e22fa5e7dbce69228e0face99df3478c 84 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS09620 e22fa5e7dbce69228e0face99df3478c 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.8E-19 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS09620 e22fa5e7dbce69228e0face99df3478c 84 PRINTS PR01249 Ribosomal protein L31 signature 45 60 4.8E-19 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS09620 e22fa5e7dbce69228e0face99df3478c 84 PRINTS PR01249 Ribosomal protein L31 signature 60 78 4.8E-19 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS02100 2c0283fea76c3f08ec731ba443a0644b 300 Pfam PF08338 Domain of unknown function (DUF1731) 251 297 5.8E-17 T 28-03-2018 IPR013549 Domain of unknown function DUF1731 RK98_RS02100 2c0283fea76c3f08ec731ba443a0644b 300 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 5 294 3.4E-109 T 28-03-2018 IPR010099 Epimerase family protein SDR39U1 RK98_RS02100 2c0283fea76c3f08ec731ba443a0644b 300 SUPERFAMILY SSF51735 2 299 4.55E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS02100 2c0283fea76c3f08ec731ba443a0644b 300 Gene3D G3DSA:3.40.50.720 2 300 3.2E-27 T 28-03-2018 RK98_RS02100 2c0283fea76c3f08ec731ba443a0644b 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 217 3.4E-18 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 3 585 3.9E-258 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 3 587 34.977 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 Pfam PF02938 GAD domain 314 408 2.4E-28 T 28-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 SUPERFAMILY SSF50249 4 108 6.67E-32 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 123 560 1.4E-113 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 SUPERFAMILY SSF55681 118 298 9.16E-111 T 28-03-2018 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 SUPERFAMILY SSF55681 427 587 9.16E-111 T 28-03-2018 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 Gene3D G3DSA:3.30.930.10 119 560 3.1E-104 T 28-03-2018 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 Gene3D G3DSA:2.40.50.140 1 111 2.6E-27 T 28-03-2018 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 Pfam PF01336 OB-fold nucleic acid binding domain 21 105 4.9E-18 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 5.8E-27 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 5.8E-27 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 5.8E-27 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 5.8E-27 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS14695 784f58c4a0c25b5e58b0e7b837d2c421 588 SUPERFAMILY SSF55261 295 422 3.27E-40 T 28-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 RK98_RS02790 bd968c4c9fe371130bcf9e4e6cecce44 575 SMART SM00382 360 553 5.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02790 bd968c4c9fe371130bcf9e4e6cecce44 575 Pfam PF00664 ABC transporter transmembrane region 24 289 2.6E-50 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS02790 bd968c4c9fe371130bcf9e4e6cecce44 575 Gene3D G3DSA:1.20.1560.10 4 322 1.0E-68 T 28-03-2018 RK98_RS02790 bd968c4c9fe371130bcf9e4e6cecce44 575 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS02790 bd968c4c9fe371130bcf9e4e6cecce44 575 Pfam PF00005 ABC transporter 351 501 2.4E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02790 bd968c4c9fe371130bcf9e4e6cecce44 575 SUPERFAMILY SSF52540 331 571 5.21E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02790 bd968c4c9fe371130bcf9e4e6cecce44 575 Gene3D G3DSA:3.40.50.300 323 575 7.7E-72 T 28-03-2018 RK98_RS02790 bd968c4c9fe371130bcf9e4e6cecce44 575 SUPERFAMILY SSF90123 10 319 4.58E-73 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS03330 0aab7862082de4b1aa6496ac2d07f72e 122 Gene3D G3DSA:1.20.5.710 2 51 6.7E-18 T 28-03-2018 RK98_RS03330 0aab7862082de4b1aa6496ac2d07f72e 122 SUPERFAMILY SSF54736 52 122 1.92E-24 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RK98_RS03330 0aab7862082de4b1aa6496ac2d07f72e 122 SUPERFAMILY SSF48300 3 58 1.83E-18 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS03330 0aab7862082de4b1aa6496ac2d07f72e 122 Gene3D G3DSA:3.30.1390.10 52 122 4.5E-29 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like RK98_RS03330 0aab7862082de4b1aa6496ac2d07f72e 122 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 56 122 2.1E-29 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS03330 0aab7862082de4b1aa6496ac2d07f72e 122 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 50 1.4E-21 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS03330 0aab7862082de4b1aa6496ac2d07f72e 122 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 122 24.815 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS03330 0aab7862082de4b1aa6496ac2d07f72e 122 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 122 2.0E-16 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS03330 0aab7862082de4b1aa6496ac2d07f72e 122 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 122 2.2E-47 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS06795 1bfa14252de75474c36c32a7b86170cd 251 Gene3D G3DSA:3.40.50.300 1 244 1.3E-62 T 28-03-2018 RK98_RS06795 1bfa14252de75474c36c32a7b86170cd 251 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS06795 1bfa14252de75474c36c32a7b86170cd 251 Pfam PF00005 ABC transporter 22 170 1.2E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS06795 1bfa14252de75474c36c32a7b86170cd 251 SMART SM00382 31 218 1.6E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS06795 1bfa14252de75474c36c32a7b86170cd 251 SUPERFAMILY SSF52540 2 222 5.47E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12875 d95837bbfc42df9aa5982285659b0163 97 SUPERFAMILY SSF89957 4 96 6.28E-21 T 28-03-2018 IPR029756 MTH1187/YkoF-like RK98_RS12875 d95837bbfc42df9aa5982285659b0163 97 Pfam PF01910 Thiamine-binding protein 6 93 2.5E-16 T 28-03-2018 IPR002767 Thiamine-binding protein RK98_RS12875 d95837bbfc42df9aa5982285659b0163 97 Gene3D G3DSA:3.30.70.930 1 96 1.6E-18 T 28-03-2018 IPR029756 MTH1187/YkoF-like RK98_RS13715 4821b0adcb0940d2a0807e3516aba75b 381 Pfam PF01170 Putative RNA methylase family UPF0020 161 367 4.6E-58 T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS13715 4821b0adcb0940d2a0807e3516aba75b 381 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 194 205 - T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 RK98_RS13715 4821b0adcb0940d2a0807e3516aba75b 381 SUPERFAMILY SSF53335 253 371 1.86E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS13715 4821b0adcb0940d2a0807e3516aba75b 381 SUPERFAMILY SSF53335 142 216 1.86E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS13715 4821b0adcb0940d2a0807e3516aba75b 381 SMART SM00981 55 153 2.2E-11 T 28-03-2018 IPR004114 THUMP domain GO:0003723 RK98_RS13715 4821b0adcb0940d2a0807e3516aba75b 381 Gene3D G3DSA:3.40.50.150 159 381 2.7E-36 T 28-03-2018 RK98_RS13715 4821b0adcb0940d2a0807e3516aba75b 381 Pfam PF02926 THUMP domain 19 153 1.8E-11 T 28-03-2018 IPR004114 THUMP domain GO:0003723 RK98_RS08650 f09691f5c7e49a549c31d45469d06e7d 651 Gene3D G3DSA:1.10.10.60 195 250 3.0E-9 T 28-03-2018 RK98_RS08650 f09691f5c7e49a549c31d45469d06e7d 651 Pfam PF12833 Helix-turn-helix domain 168 245 2.1E-14 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS08650 f09691f5c7e49a549c31d45469d06e7d 651 SMART SM00342 160 243 2.1E-10 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS08650 f09691f5c7e49a549c31d45469d06e7d 651 Gene3D G3DSA:2.60.120.10 20 194 4.7E-11 T 28-03-2018 IPR014710 RmlC-like jelly roll fold RK98_RS08650 f09691f5c7e49a549c31d45469d06e7d 651 SUPERFAMILY SSF46689 196 248 2.24E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS06895 7f698fda1bcb49bc96a6f87cabcd88ef 70 SUPERFAMILY SSF140652 1 67 4.05E-19 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS06895 7f698fda1bcb49bc96a6f87cabcd88ef 70 Gene3D G3DSA:1.10.150.260 1 67 7.8E-20 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS06895 7f698fda1bcb49bc96a6f87cabcd88ef 70 Pfam PF06855 YozE SAM-like fold 2 67 5.6E-20 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS11625 982e97e624f087a0ec023bcbec111498 105 Pfam PF16403 Domain of unknown function (DUF5011) 33 104 1.5E-22 T 28-03-2018 IPR032179 Domain of unknown function DUF5011 RK98_RS11625 982e97e624f087a0ec023bcbec111498 105 Gene3D G3DSA:2.60.40.10 28 105 1.3E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS07870 91f52e447785b700d6017ccfbea94d57 218 PIRSF PIRSF032442 1 204 7.2E-76 T 28-03-2018 IPR016997 Uncharacterised conserved protein UCP032442 RK98_RS07870 91f52e447785b700d6017ccfbea94d57 218 Gene3D G3DSA:3.90.70.10 19 218 2.6E-16 T 28-03-2018 RK98_RS07870 91f52e447785b700d6017ccfbea94d57 218 Pfam PF13529 Peptidase_C39 like family 7 159 1.5E-19 T 28-03-2018 RK98_RS10135 0cfaf6e45632a55ea419206457fc94b3 208 Pfam PF00881 Nitroreductase family 18 186 2.8E-15 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 RK98_RS10135 0cfaf6e45632a55ea419206457fc94b3 208 Gene3D G3DSA:3.40.109.10 11 207 2.8E-24 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RK98_RS10135 0cfaf6e45632a55ea419206457fc94b3 208 SUPERFAMILY SSF55469 11 206 2.09E-68 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RK98_RS04625 9faab588ff4e7766b158ac0df0e7c2ca 110 Gene3D G3DSA:2.40.50.100 4 109 3.0E-21 T 28-03-2018 RK98_RS04625 9faab588ff4e7766b158ac0df0e7c2ca 110 SUPERFAMILY SSF51230 3 102 7.33E-23 T 28-03-2018 IPR011053 Single hybrid motif RK98_RS04625 9faab588ff4e7766b158ac0df0e7c2ca 110 Pfam PF01597 Glycine cleavage H-protein 6 104 6.8E-17 T 28-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate RK98_RS09120 684934fedaf62030e630783c954c375c 338 Gene3D G3DSA:3.30.70.270 67 241 5.2E-23 T 28-03-2018 RK98_RS09120 684934fedaf62030e630783c954c375c 338 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 90 104 4.3E-34 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RK98_RS09120 684934fedaf62030e630783c954c375c 338 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 171 184 4.3E-34 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RK98_RS09120 684934fedaf62030e630783c954c375c 338 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 125 135 4.3E-34 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RK98_RS09120 684934fedaf62030e630783c954c375c 338 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 153 166 4.3E-34 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RK98_RS09120 684934fedaf62030e630783c954c375c 338 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 236 242 4.3E-34 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RK98_RS09120 684934fedaf62030e630783c954c375c 338 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 106 124 4.3E-34 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RK98_RS09120 684934fedaf62030e630783c954c375c 338 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 44 57 4.3E-34 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RK98_RS09120 684934fedaf62030e630783c954c375c 338 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 186 197 4.3E-34 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RK98_RS09120 684934fedaf62030e630783c954c375c 338 PRINTS PR00866 RNA-dependent DNA-polymerase (msDNA) signature 59 71 4.3E-34 T 28-03-2018 IPR000123 RNA-directed DNA polymerase (reverse transcriptase), msDNA GO:0003723|GO:0003964|GO:0006278 RK98_RS09120 684934fedaf62030e630783c954c375c 338 SUPERFAMILY SSF56672 18 229 5.21E-18 T 28-03-2018 RK98_RS09120 684934fedaf62030e630783c954c375c 338 Pfam PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) 49 228 2.4E-26 T 28-03-2018 IPR000477 Reverse transcriptase domain RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 676 692 - T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Pfam PF05190 MutS family domain IV 412 505 8.2E-28 T 28-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 SUPERFAMILY SSF53150 114 264 7.06E-35 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 SMART SM00534 595 782 2.2E-108 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 SMART SM00533 268 578 2.6E-105 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Pfam PF05192 MutS domain III 256 546 3.7E-44 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Gene3D G3DSA:3.30.420.110 128 245 8.5E-24 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 PIRSF PIRSF037677 196 853 2.4E-132 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 PIRSF PIRSF037677 1 240 1.5E-40 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 SUPERFAMILY SSF52540 554 785 3.06E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 5 868 0.0 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Gene3D G3DSA:3.40.50.300 554 826 7.7E-42 T 28-03-2018 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Pfam PF05188 MutS domain II 125 237 4.8E-17 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Pfam PF00488 MutS domain V 599 785 2.2E-82 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 SUPERFAMILY SSF48334 251 553 1.01E-85 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Pfam PF01624 MutS domain I 5 115 4.1E-48 T 28-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 863 25.086 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Gene3D G3DSA:1.10.1420.10 247 390 1.2E-36 T 28-03-2018 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Gene3D G3DSA:1.10.1420.10 391 522 4.0E-27 T 28-03-2018 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 SUPERFAMILY SSF55271 2 112 7.46E-46 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 RK98_RS12895 e3ca6600de217dacd49bd09445ec93c1 872 Gene3D G3DSA:3.40.1170.10 1 127 2.3E-50 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 2.1E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 2.1E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 2.1E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 2.1E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 2.1E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 SUPERFAMILY SSF55347 181 491 1.96E-111 T 28-03-2018 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 191 4.2E-61 T 28-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 Gene3D G3DSA:3.30.360.10 193 492 1.4E-120 T 28-03-2018 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 491 1.7E-191 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 Gene3D G3DSA:3.40.50.720 7 192 3.4E-68 T 28-03-2018 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 489 3.3E-113 T 28-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 491 83.48 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 SUPERFAMILY SSF51735 8 194 1.16E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS14050 cb2207fe7042a582a2ba7ea16084255c 494 PIRSF PIRSF000110 1 493 8.3E-184 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 RK98_RS02140 fcd0a9ee0db5ab360f387a436ef708d4 479 Gene3D G3DSA:1.25.40.10 14 105 4.3E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS02140 fcd0a9ee0db5ab360f387a436ef708d4 479 Gene3D G3DSA:1.25.40.10 120 422 5.6E-14 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS02140 fcd0a9ee0db5ab360f387a436ef708d4 479 SMART SM00028 15 48 0.084 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS02140 fcd0a9ee0db5ab360f387a436ef708d4 479 SMART SM00028 176 209 0.26 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 RK98_RS02140 fcd0a9ee0db5ab360f387a436ef708d4 479 SUPERFAMILY SSF48452 18 243 1.52E-12 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS02140 fcd0a9ee0db5ab360f387a436ef708d4 479 Pfam PF14559 Tetratricopeptide repeat 26 70 2.5E-8 T 28-03-2018 RK98_RS06415 d2a706be9a231aaddc99317b7a402a5a 191 Gene3D G3DSA:3.10.450.50 77 188 2.2E-4 T 28-03-2018 RK98_RS06415 d2a706be9a231aaddc99317b7a402a5a 191 SUPERFAMILY SSF54427 82 176 9.44E-5 T 28-03-2018 IPR032710 NTF2-like domain RK98_RS06415 d2a706be9a231aaddc99317b7a402a5a 191 SUPERFAMILY SSF47789 8 63 4.71E-7 T 28-03-2018 RK98_RS06415 d2a706be9a231aaddc99317b7a402a5a 191 Gene3D G3DSA:1.10.150.20 2 71 6.7E-11 T 28-03-2018 RK98_RS09775 4bfddfc954c76d06a2832bfe554b0188 290 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 1 252 28.829 T 28-03-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes RK98_RS09775 4bfddfc954c76d06a2832bfe554b0188 290 PRINTS PR00701 60kDa inner membrane protein signature 129 152 3.1E-6 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RK98_RS09775 4bfddfc954c76d06a2832bfe554b0188 290 PRINTS PR00701 60kDa inner membrane protein signature 215 238 3.1E-6 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RK98_RS09775 4bfddfc954c76d06a2832bfe554b0188 290 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 55 248 1.9E-47 T 28-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal RK98_RS09775 4bfddfc954c76d06a2832bfe554b0188 290 Pfam PF02096 60Kd inner membrane protein 56 248 3.4E-44 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 RK98_RS03170 0bec4ca8a6ca8e16ae08a3b2aec71a10 182 SUPERFAMILY SSF53697 8 181 1.78E-35 T 28-03-2018 RK98_RS03170 0bec4ca8a6ca8e16ae08a3b2aec71a10 182 Pfam PF01380 SIS domain 33 140 1.1E-18 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 RK98_RS03170 0bec4ca8a6ca8e16ae08a3b2aec71a10 182 TIGRFAM TIGR03127 RuMP_HxlB: 6-phospho 3-hexuloisomerase 8 182 7.3E-68 T 28-03-2018 IPR017552 3-hexulose-6-phosphate isomerase GO:0016853 RK98_RS03170 0bec4ca8a6ca8e16ae08a3b2aec71a10 182 Gene3D G3DSA:3.40.50.10490 6 182 1.3E-37 T 28-03-2018 RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 SMART SM00479 5 171 7.2E-35 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 SMART SM00491 733 861 1.6E-13 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 Pfam PF00929 Exonuclease 8 161 9.1E-26 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 SUPERFAMILY SSF53098 3 227 1.3E-49 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 Gene3D G3DSA:3.40.50.300 248 686 2.3E-19 T 28-03-2018 RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 Gene3D G3DSA:3.30.420.10 2 173 6.0E-41 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 SUPERFAMILY SSF52540 401 470 2.4E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 SUPERFAMILY SSF52540 690 856 2.4E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 SUPERFAMILY SSF52540 643 657 2.4E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 SUPERFAMILY SSF52540 262 319 2.4E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 5 895 0.0 T 28-03-2018 IPR006310 DnaQ exonuclease/DinG helicase, predicted RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 Pfam PF13307 Helicase C-terminal domain 716 874 6.4E-32 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 5 171 7.2E-27 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS13780 914173d4881bdf28c3e4dc34f2211bdc 897 Gene3D G3DSA:3.40.50.300 695 897 2.9E-12 T 28-03-2018 RK98_RS06030 2fd6c70b3b4e9b09a51eb650bc2077c0 105 Gene3D G3DSA:3.40.140.10 20 103 2.8E-26 T 28-03-2018 RK98_RS06030 2fd6c70b3b4e9b09a51eb650bc2077c0 105 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 94 99 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site RK98_RS06030 2fd6c70b3b4e9b09a51eb650bc2077c0 105 Pfam PF04002 RadC-like JAB domain 24 101 3.4E-23 T 28-03-2018 IPR025657 RadC-like JAB domain RK98_RS06855 9bf96b1423db28cb7f71f7dafda23c97 178 PIRSF PIRSF000368 3 178 6.3E-64 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 RK98_RS06855 9bf96b1423db28cb7f71f7dafda23c97 178 Pfam PF13353 4Fe-4S single cluster domain 22 161 8.4E-44 T 28-03-2018 RK98_RS06855 9bf96b1423db28cb7f71f7dafda23c97 178 Pfam PF04055 Radical SAM superfamily 33 117 2.2E-9 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS06855 9bf96b1423db28cb7f71f7dafda23c97 178 SUPERFAMILY SSF102114 34 109 3.4E-10 T 28-03-2018 RK98_RS06855 9bf96b1423db28cb7f71f7dafda23c97 178 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 13 163 1.8E-47 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 RK98_RS06855 9bf96b1423db28cb7f71f7dafda23c97 178 Gene3D G3DSA:3.80.30.20 24 136 5.1E-11 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe RK98_RS09795 2baabba07b26fcea0598ac093f1f1cca 215 SUPERFAMILY SSF109604 1 213 9.16E-64 T 28-03-2018 RK98_RS09795 2baabba07b26fcea0598ac093f1f1cca 215 Pfam PF01966 HD domain 28 127 1.6E-6 T 28-03-2018 IPR006674 HD domain RK98_RS09795 2baabba07b26fcea0598ac093f1f1cca 215 SMART SM00471 22 137 3.4E-10 T 28-03-2018 IPR003607 HD/PDEase domain RK98_RS09795 2baabba07b26fcea0598ac093f1f1cca 215 Gene3D G3DSA:1.10.3210.10 2 214 6.7E-20 T 28-03-2018 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 Gene3D G3DSA:3.40.50.1260 3 183 2.3E-69 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 PRINTS PR00477 Phosphoglycerate kinase family signature 172 194 1.8E-91 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 PRINTS PR00477 Phosphoglycerate kinase family signature 348 359 1.8E-91 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 1.8E-91 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 1.8E-91 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.8E-91 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 PRINTS PR00477 Phosphoglycerate kinase family signature 142 164 1.8E-91 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 PRINTS PR00477 Phosphoglycerate kinase family signature 371 388 1.8E-91 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.8E-91 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 PRINTS PR00477 Phosphoglycerate kinase family signature 195 214 1.8E-91 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 Pfam PF00162 Phosphoglycerate kinase 6 385 6.2E-155 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 PIRSF PIRSF000724 1 396 5.1E-142 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 395 40.675 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 SUPERFAMILY SSF53748 4 395 3.53E-151 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 28-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02070 b9fba51acf38725067d1e16326ea6955 396 Gene3D G3DSA:3.40.50.1260 184 383 3.9E-82 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS12600 89d5412d9ff87de882e0e536f1d4ff26 245 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 245 112.455 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RK98_RS12600 89d5412d9ff87de882e0e536f1d4ff26 245 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 232 3.8E-101 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RK98_RS12600 89d5412d9ff87de882e0e536f1d4ff26 245 SUPERFAMILY SSF75217 1 240 2.09E-104 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases RK98_RS12600 89d5412d9ff87de882e0e536f1d4ff26 245 Gene3D G3DSA:3.40.1280.10 1 167 2.0E-78 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK98_RS12600 89d5412d9ff87de882e0e536f1d4ff26 245 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 22 219 5.2E-71 T 28-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RK98_RS12600 89d5412d9ff87de882e0e536f1d4ff26 245 PIRSF PIRSF000386 1 244 4.8E-106 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 RK98_RS12600 89d5412d9ff87de882e0e536f1d4ff26 245 Gene3D G3DSA:1.10.1270.20 168 244 9.9E-35 T 28-03-2018 RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 Gene3D G3DSA:3.40.50.970 148 522 3.4E-75 T 28-03-2018 RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 SMART SM00861 589 785 9.9E-45 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 PIRSF PIRSF000157 1 931 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 Pfam PF02779 Transketolase, pyrimidine binding domain 589 785 4.6E-53 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 Pfam PF00676 Dehydrogenase E1 component 214 522 1.6E-65 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 SUPERFAMILY SSF52518 576 791 2.26E-39 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 Gene3D G3DSA:3.40.50.970 586 798 1.1E-47 T 28-03-2018 RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 16 928 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 792 929 9.2E-34 T 28-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 1 931 22.356 T 28-03-2018 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 Gene3D G3DSA:1.10.287.1150 63 145 6.5E-8 T 28-03-2018 RK98_RS13555 e0112c59671d19ac0d0aad3fe5cb24fe 932 SUPERFAMILY SSF52518 146 565 2.27E-69 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS05710 19c8c1db6be12f0338dfb437646e2415 418 Gene3D G3DSA:1.20.1250.20 206 398 3.6E-24 T 28-03-2018 RK98_RS05710 19c8c1db6be12f0338dfb437646e2415 418 Gene3D G3DSA:1.20.1250.20 4 201 7.0E-29 T 28-03-2018 RK98_RS05710 19c8c1db6be12f0338dfb437646e2415 418 Pfam PF07690 Major Facilitator Superfamily 14 243 4.6E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS05710 19c8c1db6be12f0338dfb437646e2415 418 Pfam PF00083 Sugar (and other) transporter 245 393 9.8E-7 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 RK98_RS05710 19c8c1db6be12f0338dfb437646e2415 418 SUPERFAMILY SSF103473 8 394 1.7E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS05710 19c8c1db6be12f0338dfb437646e2415 418 PRINTS PR01035 Tetracycline resistance protein signature 342 365 7.6E-9 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RK98_RS05710 19c8c1db6be12f0338dfb437646e2415 418 PRINTS PR01035 Tetracycline resistance protein signature 20 36 7.6E-9 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RK98_RS05710 19c8c1db6be12f0338dfb437646e2415 418 PRINTS PR01035 Tetracycline resistance protein signature 109 130 7.6E-9 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RK98_RS05710 19c8c1db6be12f0338dfb437646e2415 418 PRINTS PR01035 Tetracycline resistance protein signature 139 161 7.6E-9 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RK98_RS07685 c3100140542ee4c1429b86a6befaefdd 532 SUPERFAMILY SSF53850 31 525 1.71E-102 T 28-03-2018 RK98_RS07685 c3100140542ee4c1429b86a6befaefdd 532 Gene3D G3DSA:3.90.76.10 43 185 4.4E-29 T 28-03-2018 RK98_RS07685 c3100140542ee4c1429b86a6befaefdd 532 PIRSF PIRSF002741 2 532 2.9E-84 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RK98_RS07685 c3100140542ee4c1429b86a6befaefdd 532 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site RK98_RS07685 c3100140542ee4c1429b86a6befaefdd 532 Gene3D G3DSA:3.10.105.10 288 503 1.3E-44 T 28-03-2018 RK98_RS07685 c3100140542ee4c1429b86a6befaefdd 532 Gene3D G3DSA:3.40.190.10 186 287 3.9E-17 T 28-03-2018 RK98_RS07685 c3100140542ee4c1429b86a6befaefdd 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 449 5.9E-78 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain RK98_RS07685 c3100140542ee4c1429b86a6befaefdd 532 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 29 530 8.7E-237 T 28-03-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 RK98_RS01920 dd4baf1fe8c46640c5bdaa14ea0e0af7 186 Pfam PF16229 Domain of unknown function (DUF4888) 43 183 3.7E-18 T 28-03-2018 IPR032614 Protein of unknown function DUF4888 RK98_RS05960 81ce3adedb32a894894444426389df19 558 PIRSF PIRSF001294 1 558 1.5E-225 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RK98_RS05960 81ce3adedb32a894894444426389df19 558 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 2 554 4.6E-177 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RK98_RS05960 81ce3adedb32a894894444426389df19 558 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 556 29.488 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RK98_RS05960 81ce3adedb32a894894444426389df19 558 Pfam PF03814 Potassium-transporting ATPase A subunit 5 554 1.5E-215 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RK98_RS08790 183c7f3a48a9deb75e564e7ed656f9d9 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 1 77 4.8E-22 T 28-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 RK98_RS08790 183c7f3a48a9deb75e564e7ed656f9d9 77 SUPERFAMILY SSF54285 1 77 3.05E-16 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp RK98_RS08790 183c7f3a48a9deb75e564e7ed656f9d9 77 Pfam PF02597 ThiS family 3 77 4.7E-17 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 RK98_RS08790 183c7f3a48a9deb75e564e7ed656f9d9 77 Gene3D G3DSA:3.10.20.30 1 77 1.1E-19 T 28-03-2018 IPR012675 Beta-grasp domain RK98_RS10380 e642ebbc8906442d6b7aebc0bc711d1e 164 Gene3D G3DSA:3.40.630.30 1 164 1.1E-15 T 28-03-2018 RK98_RS10380 e642ebbc8906442d6b7aebc0bc711d1e 164 Pfam PF13420 Acetyltransferase (GNAT) domain 4 156 2.0E-41 T 28-03-2018 RK98_RS10380 e642ebbc8906442d6b7aebc0bc711d1e 164 SUPERFAMILY SSF55729 1 159 4.61E-15 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 Gene3D G3DSA:3.40.1160.10 1 313 2.5E-51 T 28-03-2018 RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 Pfam PF00696 Amino acid kinase family 4 295 4.4E-28 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 TIGRFAM TIGR00746 arcC: carbamate kinase 4 311 3.2E-119 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 PIRSF PIRSF000723 1 313 2.0E-121 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 PRINTS PR01469 Bacterial carbamate kinase signature 159 178 5.1E-61 T 28-03-2018 RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 PRINTS PR01469 Bacterial carbamate kinase signature 267 282 5.1E-61 T 28-03-2018 RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 PRINTS PR01469 Bacterial carbamate kinase signature 182 200 5.1E-61 T 28-03-2018 RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 PRINTS PR01469 Bacterial carbamate kinase signature 109 128 5.1E-61 T 28-03-2018 RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 5.1E-61 T 28-03-2018 RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 PRINTS PR01469 Bacterial carbamate kinase signature 212 227 5.1E-61 T 28-03-2018 RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 5.1E-61 T 28-03-2018 RK98_RS06745 0fbf8594e74a8cd030726de41bd34c2c 313 SUPERFAMILY SSF53633 3 311 1.11E-80 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS02060 9bc38b97841184f1482c7512956db400 505 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 4 503 2.6E-209 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02060 9bc38b97841184f1482c7512956db400 505 Gene3D G3DSA:3.40.1450.10 77 295 3.9E-94 T 28-03-2018 RK98_RS02060 9bc38b97841184f1482c7512956db400 505 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 293 5.3E-83 T 28-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02060 9bc38b97841184f1482c7512956db400 505 Gene3D G3DSA:3.40.720.10 296 498 6.0E-55 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RK98_RS02060 9bc38b97841184f1482c7512956db400 505 SUPERFAMILY SSF64158 77 303 1.57E-85 T 28-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02060 9bc38b97841184f1482c7512956db400 505 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 504 48.947 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02060 9bc38b97841184f1482c7512956db400 505 PIRSF PIRSF001492 1 505 1.5E-200 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 RK98_RS02060 9bc38b97841184f1482c7512956db400 505 SUPERFAMILY SSF53649 305 503 5.76E-72 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RK98_RS02060 9bc38b97841184f1482c7512956db400 505 SUPERFAMILY SSF53649 4 77 5.76E-72 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RK98_RS02060 9bc38b97841184f1482c7512956db400 505 Pfam PF01676 Metalloenzyme superfamily 4 492 1.2E-76 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 556 605 1.8E-10 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 550 1.2E-11 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 810 8.7E-11 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 661 706 2.4E-13 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 713 754 3.2E-12 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 614 657 3.3E-10 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Gene3D G3DSA:3.30.1360.40 237 334 9.8E-35 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 SMART SM00434 12 466 4.2E-291 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 6 812 24.734 T 28-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 SUPERFAMILY SSF56719 32 488 1.19E-177 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 473 1.5E-158 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 SUPERFAMILY SSF101904 501 823 7.46E-107 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Gene3D G3DSA:3.90.199.10 35 215 8.9E-84 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Gene3D G3DSA:2.120.10.90 501 828 2.1E-124 T 28-03-2018 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 811 0.0 T 28-03-2018 RK98_RS06300 8993bed99ae1d4107b3e65035a74f175 889 Gene3D G3DSA:1.10.268.10 346 488 1.1E-52 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS07910 2239bcca55185cae85e080a6829d38f9 587 Gene3D G3DSA:1.20.1560.10 7 322 2.9E-40 T 28-03-2018 RK98_RS07910 2239bcca55185cae85e080a6829d38f9 587 SUPERFAMILY SSF90123 11 321 9.16E-51 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS07910 2239bcca55185cae85e080a6829d38f9 587 Pfam PF00664 ABC transporter transmembrane region 23 291 5.4E-25 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 RK98_RS07910 2239bcca55185cae85e080a6829d38f9 587 SMART SM00382 364 556 4.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS07910 2239bcca55185cae85e080a6829d38f9 587 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS07910 2239bcca55185cae85e080a6829d38f9 587 Pfam PF00005 ABC transporter 356 504 5.3E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS07910 2239bcca55185cae85e080a6829d38f9 587 Gene3D G3DSA:3.40.50.300 323 580 3.5E-73 T 28-03-2018 RK98_RS07910 2239bcca55185cae85e080a6829d38f9 587 SUPERFAMILY SSF52540 331 574 6.04E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02155 961477fa5ab0b132b623853054174dc7 310 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 1 304 41.739 T 28-03-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RK98_RS02155 961477fa5ab0b132b623853054174dc7 310 SUPERFAMILY SSF53795 131 297 1.4E-40 T 28-03-2018 RK98_RS02155 961477fa5ab0b132b623853054174dc7 310 Gene3D G3DSA:3.40.1390.20 2 127 3.2E-42 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RK98_RS02155 961477fa5ab0b132b623853054174dc7 310 Gene3D G3DSA:3.40.50.300 131 305 1.6E-44 T 28-03-2018 RK98_RS02155 961477fa5ab0b132b623853054174dc7 310 Pfam PF02603 HPr Serine kinase N terminus 3 125 4.2E-39 T 28-03-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RK98_RS02155 961477fa5ab0b132b623853054174dc7 310 Pfam PF07475 HPr Serine kinase C-terminal domain 128 296 3.5E-75 T 28-03-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 RK98_RS02155 961477fa5ab0b132b623853054174dc7 310 SUPERFAMILY SSF75138 2 128 7.59E-39 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RK98_RS02155 961477fa5ab0b132b623853054174dc7 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 3 301 7.3E-117 T 28-03-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 TIGRFAM TIGR03658 IsdH_HarA: haptoglobin-binding heme uptake protein HarA 1 891 0.0 T 28-03-2018 IPR019930 Haptoglobin-binding haem uptake protein HarA GO:0020037 RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 SMART SM00725 105 232 1.9E-36 T 28-03-2018 IPR006635 NEAT domain RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 SMART SM00725 543 660 2.5E-37 T 28-03-2018 IPR006635 NEAT domain RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 SMART SM00725 345 471 1.9E-40 T 28-03-2018 IPR006635 NEAT domain RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 SUPERFAMILY SSF158911 87 228 1.96E-37 T 28-03-2018 RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 Pfam PF04650 YSIRK type signal peptide 10 31 6.5E-6 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 SUPERFAMILY SSF158911 327 468 2.75E-40 T 28-03-2018 RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 11 43 4.6E-10 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 857 888 3.4E-5 T 28-03-2018 RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 Pfam PF05031 Iron Transport-associated domain 551 650 1.6E-11 T 28-03-2018 IPR006635 NEAT domain RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 Pfam PF05031 Iron Transport-associated domain 344 456 1.2E-12 T 28-03-2018 IPR006635 NEAT domain RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 Pfam PF05031 Iron Transport-associated domain 112 219 1.4E-8 T 28-03-2018 IPR006635 NEAT domain RK98_RS00210 12c52404fa4012c0ba033fa9c570b2a2 891 SUPERFAMILY SSF158911 525 659 9.68E-29 T 28-03-2018 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 11 495 46.266 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 494 1.0E-221 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 Pfam PF01336 OB-fold nucleic acid binding domain 61 138 7.3E-13 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 SUPERFAMILY SSF55681 154 493 2.87E-124 T 28-03-2018 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 492 2.5E-84 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 Gene3D G3DSA:2.40.50.140 5 147 1.6E-38 T 28-03-2018 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 Gene3D G3DSA:3.30.930.10 148 492 3.8E-109 T 28-03-2018 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 377 393 3.0E-40 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 3.0E-40 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 3.0E-40 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 236 249 3.0E-40 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 254 271 3.0E-40 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 SUPERFAMILY SSF50249 4 147 3.67E-41 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS03525 d4a031c497c0380455c787b65bf47772 495 PIRSF PIRSF039101 2 495 4.8E-198 T 28-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 RK98_RS02225 584d5cc01cd210a77af74bcd4aaf2755 213 Gene3D G3DSA:3.30.70.240 138 198 3.4E-11 T 28-03-2018 RK98_RS02225 584d5cc01cd210a77af74bcd4aaf2755 213 Pfam PF01205 Uncharacterized protein family UPF0029 20 124 1.5E-33 T 28-03-2018 IPR001498 Impact, N-terminal RK98_RS02225 584d5cc01cd210a77af74bcd4aaf2755 213 Pfam PF09186 Domain of unknown function (DUF1949) 140 195 8.2E-13 T 28-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal RK98_RS02225 584d5cc01cd210a77af74bcd4aaf2755 213 SUPERFAMILY SSF54211 3 131 2.39E-43 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS02225 584d5cc01cd210a77af74bcd4aaf2755 213 SUPERFAMILY SSF54980 137 198 3.36E-9 T 28-03-2018 IPR035647 EF-G domain III/V-like RK98_RS02225 584d5cc01cd210a77af74bcd4aaf2755 213 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 28-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site RK98_RS02225 584d5cc01cd210a77af74bcd4aaf2755 213 Gene3D G3DSA:3.30.230.30 4 133 2.2E-44 T 28-03-2018 IPR001498 Impact, N-terminal RK98_RS02225 584d5cc01cd210a77af74bcd4aaf2755 213 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 3 199 2.6E-57 T 28-03-2018 IPR015796 Impact family, bacterial/archaeal RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 Gene3D G3DSA:3.50.50.60 363 483 2.8E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 SUPERFAMILY SSF46548 5 163 3.35E-31 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 Gene3D G3DSA:3.50.50.60 247 337 1.7E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 Gene3D G3DSA:3.40.50.720 149 246 2.4E-18 T 28-03-2018 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 5 483 6.3E-184 T 28-03-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 Gene3D G3DSA:1.10.1060.10 6 148 4.5E-37 T 28-03-2018 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 140 1.9E-23 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 154 470 1.5E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 SUPERFAMILY SSF51971 387 483 1.08E-9 T 28-03-2018 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 SUPERFAMILY SSF51971 152 416 5.89E-55 T 28-03-2018 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 9.0E-21 T 28-03-2018 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 9.0E-21 T 28-03-2018 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 9.0E-21 T 28-03-2018 RK98_RS03800 92550650fe86a17a9adc738001fc3bab 487 PRINTS PR00419 Adrenodoxin reductase family signature 293 307 9.0E-21 T 28-03-2018 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 SUPERFAMILY SSF52156 484 614 1.44E-38 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Gene3D G3DSA:3.40.50.300 204 376 2.5E-40 T 28-03-2018 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Gene3D G3DSA:3.30.56.50 132 173 2.6E-11 T 28-03-2018 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Gene3D G3DSA:3.30.56.50 5 46 3.8E-14 T 28-03-2018 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 705 17.423 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 209 366 2.7E-40 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Gene3D G3DSA:2.40.30.10 608 705 8.9E-33 T 28-03-2018 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 122 705 3.2E-274 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Gene3D G3DSA:2.40.30.10 377 472 6.3E-13 T 28-03-2018 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Pfam PF11987 Translation-initiation factor 2 493 597 3.1E-37 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 SUPERFAMILY SSF50447 608 705 5.52E-36 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 52 3.7E-15 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 130 180 9.0E-16 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 SUPERFAMILY SSF52540 197 379 5.57E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Gene3D G3DSA:3.40.50.10050 505 586 3.1E-27 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 Pfam PF00009 Elongation factor Tu GTP binding domain 212 366 9.9E-36 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 SUPERFAMILY SSF50447 380 462 4.01E-24 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS12760 f5fc789bc6a33e4c3fe61694f8390bf1 705 ProSitePatterns PS01176 Initiation factor 2 signature. 658 680 - T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 RK98_RS03280 64b7c99bee0967b45921bbb791764b4a 395 SUPERFAMILY SSF53383 6 393 9.68E-112 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS03280 64b7c99bee0967b45921bbb791764b4a 395 Pfam PF00155 Aminotransferase class I and II 43 383 6.0E-69 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RK98_RS03280 64b7c99bee0967b45921bbb791764b4a 395 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RK98_RS03280 64b7c99bee0967b45921bbb791764b4a 395 Gene3D G3DSA:3.40.640.10 47 291 7.4E-52 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS03280 64b7c99bee0967b45921bbb791764b4a 395 Gene3D G3DSA:3.90.1150.10 292 393 1.2E-28 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS03280 64b7c99bee0967b45921bbb791764b4a 395 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 9 395 2.1E-209 T 28-03-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 128 138 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 PIRSF PIRSF000497 1 397 1.1E-178 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 Gene3D G3DSA:3.30.300.10 259 398 1.3E-50 T 28-03-2018 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 SUPERFAMILY SSF55973 124 245 4.24E-51 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 1.6E-42 T 28-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 396 58.866 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 Pfam PF02772 S-adenosylmethionine synthetase, central domain 127 244 1.0E-47 T 28-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 SUPERFAMILY SSF55973 5 111 5.49E-47 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 Gene3D G3DSA:3.30.300.10 13 145 1.2E-43 T 28-03-2018 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 272 280 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 SUPERFAMILY SSF55973 246 396 1.57E-71 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 246 385 5.9E-71 T 28-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 395 1.6E-187 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 RK98_RS00500 c1a0b6e2c9eb5985ca9316fe3bbd49d2 398 Gene3D G3DSA:3.30.300.10 146 246 6.4E-46 T 28-03-2018 RK98_RS06315 d361655473f6346903f3b2098fdf0ca7 81 Pfam PF13275 S4 domain 14 64 5.6E-21 T 28-03-2018 RK98_RS06315 d361655473f6346903f3b2098fdf0ca7 81 SUPERFAMILY SSF55174 7 64 8.24E-15 T 28-03-2018 RK98_RS06315 d361655473f6346903f3b2098fdf0ca7 81 Gene3D G3DSA:3.10.290.10 3 67 4.6E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS06315 d361655473f6346903f3b2098fdf0ca7 81 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 8 65 2.3E-26 T 28-03-2018 IPR014330 RNA-binding S4-related,YaaA RK98_RS11300 73e5ce28bace2a15514d2712ae99b2be 121 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 49 73 - T 28-03-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 RK98_RS11300 73e5ce28bace2a15514d2712ae99b2be 121 Gene3D G3DSA:1.10.490.10 1 121 3.0E-28 T 28-03-2018 RK98_RS11300 73e5ce28bace2a15514d2712ae99b2be 121 Pfam PF01152 Bacterial-like globin 6 118 3.0E-26 T 28-03-2018 IPR001486 Truncated hemoglobin GO:0019825 RK98_RS11300 73e5ce28bace2a15514d2712ae99b2be 121 SUPERFAMILY SSF46458 4 120 5.04E-32 T 28-03-2018 IPR009050 Globin-like RK98_RS03190 a180e7132a708293bfba1db85e01f3df 221 SUPERFAMILY SSF102588 4 218 1.44E-48 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RK98_RS03190 a180e7132a708293bfba1db85e01f3df 221 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 135 4.1E-25 T 28-03-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 RK98_RS03190 a180e7132a708293bfba1db85e01f3df 221 Gene3D G3DSA:3.40.50.10320 2 208 2.7E-42 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 RK98_RS03190 a180e7132a708293bfba1db85e01f3df 221 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 5 219 1.0E-107 T 28-03-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 RK98_RS09835 1de833573358c842a8f5cd536e76bc8d 506 Pfam PF00270 DEAD/DEAH box helicase 26 191 1.5E-49 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RK98_RS09835 1de833573358c842a8f5cd536e76bc8d 506 SMART SM00487 21 218 5.6E-59 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK98_RS09835 1de833573358c842a8f5cd536e76bc8d 506 Gene3D G3DSA:3.40.50.300 219 497 2.4E-45 T 28-03-2018 RK98_RS09835 1de833573358c842a8f5cd536e76bc8d 506 Pfam PF00271 Helicase conserved C-terminal domain 226 335 4.8E-30 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS09835 1de833573358c842a8f5cd536e76bc8d 506 SUPERFAMILY SSF52540 69 356 4.13E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09835 1de833573358c842a8f5cd536e76bc8d 506 Gene3D G3DSA:3.40.50.300 4 218 8.5E-58 T 28-03-2018 RK98_RS09835 1de833573358c842a8f5cd536e76bc8d 506 SMART SM00490 254 335 9.1E-34 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS09835 1de833573358c842a8f5cd536e76bc8d 506 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 2 505 43.167 T 28-03-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 RK98_RS09835 1de833573358c842a8f5cd536e76bc8d 506 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site RK98_RS06435 3e59ca9347f6441e2380da71f93d212f 112 SUPERFAMILY SSF46785 6 107 4.51E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06435 3e59ca9347f6441e2380da71f93d212f 112 Gene3D G3DSA:1.10.10.10 1 99 6.9E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06435 3e59ca9347f6441e2380da71f93d212f 112 Pfam PF03551 Transcriptional regulator PadR-like family 16 88 2.2E-23 T 28-03-2018 IPR005149 Transcription regulator PadR, N-terminal RK98_RS08475 0dbc10a4d45b3022ba05da7fd4a534af 553 Pfam PF17392 Urocanase C-terminal domain 344 538 8.4E-88 T 28-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS08475 0dbc10a4d45b3022ba05da7fd4a534af 553 PIRSF PIRSF001423 1 553 6.2E-292 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS08475 0dbc10a4d45b3022ba05da7fd4a534af 553 Hamap MF_00577 Urocanate hydratase [hutU]. 1 548 49.599 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS08475 0dbc10a4d45b3022ba05da7fd4a534af 553 Pfam PF17391 Urocanase N-terminal domain 4 130 8.4E-61 T 28-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS08475 0dbc10a4d45b3022ba05da7fd4a534af 553 Pfam PF01175 Urocanase Rossmann-like domain 133 341 1.6E-90 T 28-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS08475 0dbc10a4d45b3022ba05da7fd4a534af 553 Gene3D G3DSA:3.40.1770.10 188 547 3.6E-156 T 28-03-2018 RK98_RS08475 0dbc10a4d45b3022ba05da7fd4a534af 553 Gene3D G3DSA:3.40.1770.10 2 145 8.6E-28 T 28-03-2018 RK98_RS08475 0dbc10a4d45b3022ba05da7fd4a534af 553 ProSitePatterns PS01233 Urocanase signature. 434 449 - T 28-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS08475 0dbc10a4d45b3022ba05da7fd4a534af 553 SUPERFAMILY SSF111326 3 548 1.14E-253 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS08475 0dbc10a4d45b3022ba05da7fd4a534af 553 TIGRFAM TIGR01228 hutU: urocanate hydratase 2 546 2.6E-291 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS14740 4a4178bbaf709e4c96b3d9bff3627215 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 372 1.2E-173 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RK98_RS14740 4a4178bbaf709e4c96b3d9bff3627215 379 Gene3D G3DSA:3.20.20.105 1 372 1.3E-166 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RK98_RS14740 4a4178bbaf709e4c96b3d9bff3627215 379 SUPERFAMILY SSF51713 2 369 3.4E-165 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RK98_RS14740 4a4178bbaf709e4c96b3d9bff3627215 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 372 1.7E-183 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RK98_RS14740 4a4178bbaf709e4c96b3d9bff3627215 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 131 365 1.6E-95 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RK98_RS14740 4a4178bbaf709e4c96b3d9bff3627215 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 57.727 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 RK98_RS00185 e84976bb8e4b5409672683e13e55ccc1 205 Gene3D G3DSA:3.40.1130.10 1 204 8.2E-36 T 28-03-2018 RK98_RS00185 e84976bb8e4b5409672683e13e55ccc1 205 Pfam PF01553 Acyltransferase 21 144 2.7E-20 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RK98_RS00185 e84976bb8e4b5409672683e13e55ccc1 205 SMART SM00563 34 146 6.2E-24 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 RK98_RS00185 e84976bb8e4b5409672683e13e55ccc1 205 SUPERFAMILY SSF69593 11 199 1.83E-39 T 28-03-2018 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 SUPERFAMILY SSF51735 1 122 1.18E-41 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.3E-39 T 28-03-2018 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.3E-39 T 28-03-2018 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.3E-39 T 28-03-2018 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.3E-39 T 28-03-2018 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 286 9.8E-145 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 Pfam PF02629 CoA binding domain 6 99 1.1E-29 T 28-03-2018 IPR003781 CoA-binding GO:0048037 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 SUPERFAMILY SSF52210 123 285 7.98E-54 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 PIRSF PIRSF001553 1 291 2.7E-132 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 28-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 SMART SM00881 4 100 1.1E-30 T 28-03-2018 IPR003781 CoA-binding GO:0048037 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 28-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 Pfam PF00549 CoA-ligase 151 266 1.0E-18 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 Gene3D G3DSA:3.40.50.720 1 119 1.1E-42 T 28-03-2018 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 Gene3D G3DSA:3.40.50.261 120 300 9.0E-54 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RK98_RS12630 f885cead7727cab6ea98f2b25a3bff7d 302 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 42.761 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RK98_RS01240 f5825846e812b17700152a392819fcf2 328 Pfam PF06081 Aromatic acid exporter family member 1 10 148 1.0E-28 T 28-03-2018 IPR010343 Aromatic acid exporter family member 1 RK98_RS09650 1c063c221b57a74643d724f864bc75ac 139 SMART SM00226 1 137 5.5E-18 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily RK98_RS09650 1c063c221b57a74643d724f864bc75ac 139 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 2.5E-10 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RK98_RS09650 1c063c221b57a74643d724f864bc75ac 139 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 71 86 2.5E-10 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RK98_RS09650 1c063c221b57a74643d724f864bc75ac 139 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 109 124 2.5E-10 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RK98_RS09650 1c063c221b57a74643d724f864bc75ac 139 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 130 3.1E-23 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily RK98_RS09650 1c063c221b57a74643d724f864bc75ac 139 Gene3D G3DSA:3.40.50.2300 1 139 1.3E-28 T 28-03-2018 RK98_RS09650 1c063c221b57a74643d724f864bc75ac 139 SUPERFAMILY SSF52788 1 138 2.62E-29 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily RK98_RS06530 ffd4a44fb0fb5af0ad67235b908622b2 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 44.033 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 RK98_RS06530 ffd4a44fb0fb5af0ad67235b908622b2 252 SUPERFAMILY SSF51366 1 252 1.33E-73 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RK98_RS06530 ffd4a44fb0fb5af0ad67235b908622b2 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 3.5E-101 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 RK98_RS06530 ffd4a44fb0fb5af0ad67235b908622b2 252 Pfam PF00977 Histidine biosynthesis protein 5 235 5.3E-80 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 RK98_RS06530 ffd4a44fb0fb5af0ad67235b908622b2 252 Gene3D G3DSA:3.20.20.70 4 248 2.3E-59 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Gene3D G3DSA:2.40.50.140 220 319 1.9E-16 T 28-03-2018 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1436 436.794 T 28-03-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 SMART SM00479 419 585 4.1E-59 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Pfam PF14480 DNA polymerase III polC-type N-terminus I 6 77 1.8E-16 T 28-03-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Gene3D G3DSA:3.20.20.140 600 793 2.9E-18 T 28-03-2018 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 230 1434 0.0 T 28-03-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Gene3D G3DSA:3.30.420.10 412 568 3.5E-43 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Pfam PF02811 PHP domain 335 693 8.1E-52 T 28-03-2018 IPR004013 PHP domain GO:0003824 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 822 1244 2.5E-97 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 SUPERFAMILY SSF81585 1373 1419 1.18E-6 T 28-03-2018 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Pfam PF11490 DNA polymerase III polC-type N-terminus II 92 205 1.9E-17 T 28-03-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Gene3D G3DSA:1.20.5.140 569 588 4.6E-14 T 28-03-2018 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Pfam PF14579 Helix-hairpin-helix motif 1347 1426 1.2E-8 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 SMART SM00481 334 401 2.7E-25 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 414 634 7.3E-55 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Pfam PF00929 Exonuclease 421 576 3.6E-43 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 SUPERFAMILY SSF53098 419 873 2.87E-101 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Gene3D G3DSA:3.20.20.150 320 408 3.2E-5 T 28-03-2018 RK98_RS12730 74ca46effb0c75195cc671d9f6b46470 1436 Gene3D G3DSA:1.10.150.280 1371 1419 5.6E-7 T 28-03-2018 RK98_RS00305 f8e9492bc5b081d48e704589d276b62f 280 SMART SM00849 47 244 5.3E-8 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS00305 f8e9492bc5b081d48e704589d276b62f 280 SUPERFAMILY SSF56281 1 253 5.24E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS00305 f8e9492bc5b081d48e704589d276b62f 280 Pfam PF00753 Metallo-beta-lactamase superfamily 51 216 7.5E-15 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS00305 f8e9492bc5b081d48e704589d276b62f 280 Gene3D G3DSA:3.60.15.10 1 263 1.3E-38 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS13400 2498cc64dbbf34161cbcf48becb772ed 604 Pfam PF08439 Oligopeptidase F 115 180 5.5E-14 T 28-03-2018 IPR013647 Oligopeptidase F, N-terminal domain RK98_RS13400 2498cc64dbbf34161cbcf48becb772ed 604 Gene3D G3DSA:1.10.1370.10 22 580 1.5E-30 T 28-03-2018 RK98_RS13400 2498cc64dbbf34161cbcf48becb772ed 604 Pfam PF01432 Peptidase family M3 203 582 1.5E-35 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 RK98_RS13400 2498cc64dbbf34161cbcf48becb772ed 604 SUPERFAMILY SSF55486 55 600 7.69E-105 T 28-03-2018 RK98_RS13400 2498cc64dbbf34161cbcf48becb772ed 604 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 8 595 3.9E-217 T 28-03-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 RK98_RS09575 313a2df0e29247cdd1d4851120522b63 286 SUPERFAMILY SSF55729 181 278 6.0E-9 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS09575 313a2df0e29247cdd1d4851120522b63 286 SUPERFAMILY SSF55729 8 152 1.06E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS09575 313a2df0e29247cdd1d4851120522b63 286 Gene3D G3DSA:3.40.630.30 7 175 2.7E-17 T 28-03-2018 RK98_RS09575 313a2df0e29247cdd1d4851120522b63 286 Pfam PF00583 Acetyltransferase (GNAT) family 176 250 1.8E-4 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS09575 313a2df0e29247cdd1d4851120522b63 286 Pfam PF00583 Acetyltransferase (GNAT) family 54 144 6.8E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS09575 313a2df0e29247cdd1d4851120522b63 286 Gene3D G3DSA:3.40.630.30 176 286 1.3E-6 T 28-03-2018 RK98_RS11250 90eb1215aa1b0888782c86bb0bdafaae 328 SUPERFAMILY SSF52540 5 256 1.46E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11250 90eb1215aa1b0888782c86bb0bdafaae 328 SMART SM00382 34 242 9.2E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS11250 90eb1215aa1b0888782c86bb0bdafaae 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 2.1E-22 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RK98_RS11250 90eb1215aa1b0888782c86bb0bdafaae 328 Gene3D G3DSA:3.40.50.300 2 328 2.8E-78 T 28-03-2018 RK98_RS11250 90eb1215aa1b0888782c86bb0bdafaae 328 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS11250 90eb1215aa1b0888782c86bb0bdafaae 328 Pfam PF00005 ABC transporter 26 184 5.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS11250 90eb1215aa1b0888782c86bb0bdafaae 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 3.5E-17 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RK98_RS15080 5f5719bc7e7a8ab0f199687e8b1c88c1 137 SMART SM00530 8 63 2.3E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS15080 5f5719bc7e7a8ab0f199687e8b1c88c1 137 Pfam PF01381 Helix-turn-helix 9 62 7.1E-17 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS15080 5f5719bc7e7a8ab0f199687e8b1c88c1 137 Gene3D G3DSA:3.30.1190.10 28 83 2.5E-16 T 28-03-2018 RK98_RS15080 5f5719bc7e7a8ab0f199687e8b1c88c1 137 Pfam PF05154 TM2 domain 70 120 3.7E-17 T 28-03-2018 IPR007829 TM2 domain RK98_RS15080 5f5719bc7e7a8ab0f199687e8b1c88c1 137 SUPERFAMILY SSF47413 4 69 6.4E-19 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS15080 5f5719bc7e7a8ab0f199687e8b1c88c1 137 Gene3D G3DSA:1.10.10.60 3 27 3.1E-5 T 28-03-2018 RK98_RS02965 7b12c62a2aecbacdb6bb5b2b05d2c7bd 211 SMART SM00478 35 192 2.1E-10 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RK98_RS02965 7b12c62a2aecbacdb6bb5b2b05d2c7bd 211 Gene3D G3DSA:1.10.1670.10 4 99 4.5E-17 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RK98_RS02965 7b12c62a2aecbacdb6bb5b2b05d2c7bd 211 Gene3D G3DSA:1.10.1670.10 125 198 1.4E-9 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RK98_RS02965 7b12c62a2aecbacdb6bb5b2b05d2c7bd 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 32 162 1.6E-7 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RK98_RS02965 7b12c62a2aecbacdb6bb5b2b05d2c7bd 211 SUPERFAMILY SSF48150 5 198 5.34E-40 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RK98_RS02965 7b12c62a2aecbacdb6bb5b2b05d2c7bd 211 PIRSF PIRSF001435 2 202 6.9E-48 T 28-03-2018 RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 3.5E-14 T 28-03-2018 RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 3.5E-14 T 28-03-2018 RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 337 357 3.5E-14 T 28-03-2018 RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 400 419 3.5E-14 T 28-03-2018 RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 3.5E-14 T 28-03-2018 RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 302 326 3.5E-14 T 28-03-2018 RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 SUPERFAMILY SSF103473 248 472 9.55E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 SUPERFAMILY SSF103473 6 200 9.55E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 Gene3D G3DSA:1.20.1250.20 252 479 1.4E-29 T 28-03-2018 RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 441 7.9E-96 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 Gene3D G3DSA:1.20.1250.20 3 201 2.9E-37 T 28-03-2018 RK98_RS09340 858b3297cca03545f47ab34a566d1be8 480 Pfam PF07690 Major Facilitator Superfamily 19 409 3.6E-54 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS12830 e1f5255d2b52a7ce63da4e503a0b2d70 130 Pfam PF13413 Helix-turn-helix domain 8 67 1.4E-16 T 28-03-2018 RK98_RS12830 e1f5255d2b52a7ce63da4e503a0b2d70 130 SMART SM00530 7 68 1.0E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS12830 e1f5255d2b52a7ce63da4e503a0b2d70 130 SUPERFAMILY SSF47413 2 75 9.65E-10 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS12830 e1f5255d2b52a7ce63da4e503a0b2d70 130 Gene3D G3DSA:1.10.260.40 1 106 1.2E-12 T 28-03-2018 RK98_RS04430 e8da1652388625dee1314e649335467a 281 SUPERFAMILY SSF109709 102 213 3.92E-33 T 28-03-2018 RK98_RS04430 e8da1652388625dee1314e649335467a 281 Pfam PF02195 ParB-like nuclease domain 22 109 9.2E-27 T 28-03-2018 IPR003115 ParB/Sulfiredoxin RK98_RS04430 e8da1652388625dee1314e649335467a 281 Gene3D G3DSA:3.90.1530.10 8 110 2.9E-36 T 28-03-2018 RK98_RS04430 e8da1652388625dee1314e649335467a 281 SUPERFAMILY SSF110849 21 112 2.62E-28 T 28-03-2018 IPR003115 ParB/Sulfiredoxin RK98_RS04430 e8da1652388625dee1314e649335467a 281 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 18 194 3.0E-58 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RK98_RS04430 e8da1652388625dee1314e649335467a 281 SMART SM00470 21 110 2.0E-34 T 28-03-2018 IPR003115 ParB/Sulfiredoxin RK98_RS04430 e8da1652388625dee1314e649335467a 281 Gene3D G3DSA:1.10.10.730 111 158 4.5E-19 T 28-03-2018 RK98_RS14115 4d8f9eec15153c22fe8dbdd99dcd4d8c 327 SUPERFAMILY SSF52922 189 325 3.01E-40 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RK98_RS14115 4d8f9eec15153c22fe8dbdd99dcd4d8c 327 Gene3D G3DSA:3.40.50.920 195 326 2.5E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 RK98_RS14115 4d8f9eec15153c22fe8dbdd99dcd4d8c 327 SUPERFAMILY SSF52518 2 204 8.83E-70 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS14115 4d8f9eec15153c22fe8dbdd99dcd4d8c 327 Gene3D G3DSA:3.40.50.970 1 194 5.0E-67 T 28-03-2018 RK98_RS14115 4d8f9eec15153c22fe8dbdd99dcd4d8c 327 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 1.5E-45 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RK98_RS14115 4d8f9eec15153c22fe8dbdd99dcd4d8c 327 SMART SM00861 4 179 4.6E-63 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain RK98_RS14115 4d8f9eec15153c22fe8dbdd99dcd4d8c 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 9.5E-40 T 28-03-2018 IPR033248 Transketolase, C-terminal domain RK98_RS12960 5ef3be1c7638cc10b45d5e1180c53b5e 446 ProSitePatterns PS00180 Glutamine synthetase signature 1. 54 72 - T 28-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RK98_RS12960 5ef3be1c7638cc10b45d5e1180c53b5e 446 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 100 5.1E-32 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RK98_RS12960 5ef3be1c7638cc10b45d5e1180c53b5e 446 Gene3D G3DSA:3.10.20.70 4 106 8.8E-38 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RK98_RS12960 5ef3be1c7638cc10b45d5e1180c53b5e 446 Gene3D G3DSA:3.30.590.10 107 446 1.1E-125 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 RK98_RS12960 5ef3be1c7638cc10b45d5e1180c53b5e 446 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 236 251 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 RK98_RS12960 5ef3be1c7638cc10b45d5e1180c53b5e 446 Pfam PF00120 Glutamine synthetase, catalytic domain 108 442 3.4E-136 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RK98_RS12960 5ef3be1c7638cc10b45d5e1180c53b5e 446 SUPERFAMILY SSF54368 7 106 4.97E-35 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RK98_RS12960 5ef3be1c7638cc10b45d5e1180c53b5e 446 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 10 443 1.2E-173 T 28-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RK98_RS12960 5ef3be1c7638cc10b45d5e1180c53b5e 446 SUPERFAMILY SSF55931 107 443 9.51E-125 T 28-03-2018 RK98_RS12960 5ef3be1c7638cc10b45d5e1180c53b5e 446 SMART SM01230 107 356 2.8E-135 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 SUPERFAMILY SSF52540 191 509 8.5E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 SUPERFAMILY SSF52540 460 527 8.26E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 SUPERFAMILY SSF52540 565 741 8.26E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 9 811 29.054 T 28-03-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 Pfam PF14490 Helix-hairpin-helix containing domain 153 243 1.0E-28 T 28-03-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 Gene3D G3DSA:3.40.50.300 526 733 5.4E-27 T 28-03-2018 RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 Gene3D G3DSA:1.10.150.280 86 158 3.4E-6 T 28-03-2018 RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 Pfam PF13538 UvrD-like helicase C-terminal domain 672 719 1.7E-15 T 28-03-2018 IPR027785 UvrD-like helicase C-terminal domain RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 Pfam PF13604 AAA domain 339 545 3.4E-53 T 28-03-2018 RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 Gene3D G3DSA:3.40.50.300 259 525 1.9E-33 T 28-03-2018 RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 12 744 0.0 T 28-03-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 RK98_RS14625 b41af3825a5bc0d6a2a98cd0f196f670 825 SMART SM00382 352 512 9.1E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS04750 8bda72416eed6d017feca0dcc4c7e197 124 Pfam PF14729 Domain of unknown function with cystatin-like fold (DUF4467) 25 118 5.4E-36 T 28-03-2018 IPR028075 Domain of unknown function with cystatin-like fold DUF4467 RK98_RS04750 8bda72416eed6d017feca0dcc4c7e197 124 Gene3D G3DSA:1.20.120.570 8 104 3.8E-4 T 28-03-2018 RK98_RS07410 1b80b3cdf3a344694f5363ef86e3fc64 231 Gene3D G3DSA:3.40.50.300 1 231 2.7E-52 T 28-03-2018 RK98_RS07410 1b80b3cdf3a344694f5363ef86e3fc64 231 SUPERFAMILY SSF52540 3 211 5.33E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07410 1b80b3cdf3a344694f5363ef86e3fc64 231 SMART SM00382 28 199 3.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS07410 1b80b3cdf3a344694f5363ef86e3fc64 231 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS07410 1b80b3cdf3a344694f5363ef86e3fc64 231 Pfam PF00005 ABC transporter 19 151 1.0E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 PIRSF PIRSF000124 1 409 1.0E-75 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 SUPERFAMILY SSF48179 198 291 2.89E-27 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 Gene3D G3DSA:3.40.50.720 222 409 2.2E-54 T 28-03-2018 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 PIRSF PIRSF500136 1 417 8.0E-160 T 28-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 178 3.4E-59 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 397 5.4E-141 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 309 400 1.6E-22 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 285 6.7E-26 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 Gene3D G3DSA:1.20.5.170 198 221 1.0E-13 T 28-03-2018 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 SUPERFAMILY SSF52413 295 400 9.16E-26 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 SMART SM00984 308 401 2.0E-25 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 SUPERFAMILY SSF51735 1 191 8.88E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05480 8f0c9ddba92ee058c4642765c3f37af6 420 Gene3D G3DSA:3.40.50.720 1 196 2.0E-40 T 28-03-2018 RK98_RS09305 b688739db17e8c8c4c4c292ec6ce59cb 456 Pfam PF07670 Nucleoside recognition 142 236 2.0E-7 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 Gene3D G3DSA:2.40.50.100 905 1024 1.3E-37 T 28-03-2018 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 Pfam PF04998 RNA polymerase Rpb1, domain 5 765 1125 4.9E-68 T 28-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 Pfam PF04997 RNA polymerase Rpb1, domain 1 2 322 2.1E-87 T 28-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 SMART SM00663 215 494 1.2E-182 T 28-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 1 1186 18.5 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 Gene3D G3DSA:2.40.40.20 326 468 7.0E-39 T 28-03-2018 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 SUPERFAMILY SSF64484 1 1175 0.0 T 28-03-2018 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 Pfam PF00623 RNA polymerase Rpb1, domain 2 324 379 2.5E-9 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 Pfam PF00623 RNA polymerase Rpb1, domain 2 374 465 3.2E-29 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 Pfam PF05000 RNA polymerase Rpb1, domain 4 687 754 2.3E-14 T 28-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 1 1176 0.0 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS03315 e3124470f8136e2b674e0e18553456e4 1198 Pfam PF04983 RNA polymerase Rpb1, domain 3 469 658 2.3E-33 T 28-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS04450 90f62b5fc10958504aa2c867799f653d 613 SUPERFAMILY SSF82282 2 363 2.62E-95 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 RK98_RS04450 90f62b5fc10958504aa2c867799f653d 613 Gene3D G3DSA:3.20.20.220 315 611 3.3E-63 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like RK98_RS04450 90f62b5fc10958504aa2c867799f653d 613 Pfam PF02219 Methylenetetrahydrofolate reductase 318 577 3.6E-28 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RK98_RS04450 90f62b5fc10958504aa2c867799f653d 613 Pfam PF02574 Homocysteine S-methyltransferase 13 280 1.2E-53 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 RK98_RS04450 90f62b5fc10958504aa2c867799f653d 613 Gene3D G3DSA:3.20.20.330 1 314 2.3E-78 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 RK98_RS04450 90f62b5fc10958504aa2c867799f653d 613 SUPERFAMILY SSF51730 318 601 5.1E-66 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like RK98_RS00765 8fab817a4495c3d98c39af4787fcadd2 184 Gene3D G3DSA:3.40.50.1820 2 101 4.7E-9 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS00765 8fab817a4495c3d98c39af4787fcadd2 184 Gene3D G3DSA:3.40.50.1820 102 179 0.0026 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS00765 8fab817a4495c3d98c39af4787fcadd2 184 SUPERFAMILY SSF53474 3 182 1.48E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS00765 8fab817a4495c3d98c39af4787fcadd2 184 Pfam PF06821 Serine hydrolase 4 177 5.4E-18 T 28-03-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 RK98_RS08925 623c87c0fd856240d48aed6088aa4303 91 Pfam PF00276 Ribosomal protein L23 5 86 4.5E-32 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RK98_RS08925 623c87c0fd856240d48aed6088aa4303 91 Gene3D G3DSA:3.30.70.330 1 91 4.9E-31 T 28-03-2018 RK98_RS08925 623c87c0fd856240d48aed6088aa4303 91 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 91 20.112 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 RK98_RS08925 623c87c0fd856240d48aed6088aa4303 91 SUPERFAMILY SSF54189 1 86 2.45E-30 T 28-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS14845 7cf20ec6eee47571bf8f93458d191a35 630 Pfam PF00589 Phage integrase family 330 505 2.9E-44 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS14845 7cf20ec6eee47571bf8f93458d191a35 630 Gene3D G3DSA:1.10.443.10 329 510 1.5E-34 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS14845 7cf20ec6eee47571bf8f93458d191a35 630 Gene3D G3DSA:1.10.150.130 205 307 9.2E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS14845 7cf20ec6eee47571bf8f93458d191a35 630 SUPERFAMILY SSF56349 218 511 1.38E-43 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS06040 7cf20ec6eee47571bf8f93458d191a35 630 Pfam PF00589 Phage integrase family 330 505 2.9E-44 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS06040 7cf20ec6eee47571bf8f93458d191a35 630 Gene3D G3DSA:1.10.443.10 329 510 1.5E-34 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS06040 7cf20ec6eee47571bf8f93458d191a35 630 Gene3D G3DSA:1.10.150.130 205 307 9.2E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS06040 7cf20ec6eee47571bf8f93458d191a35 630 SUPERFAMILY SSF56349 218 511 1.38E-43 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS01155 88e35a7b53b3342fb16766cb47b44deb 272 Gene3D G3DSA:1.10.10.10 43 107 2.3E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS01155 88e35a7b53b3342fb16766cb47b44deb 272 Gene3D G3DSA:1.10.10.10 214 262 2.6E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS01155 88e35a7b53b3342fb16766cb47b44deb 272 Gene3D G3DSA:1.10.10.10 158 205 9.0E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS01155 88e35a7b53b3342fb16766cb47b44deb 272 Gene3D G3DSA:1.10.10.10 108 150 4.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS01155 88e35a7b53b3342fb16766cb47b44deb 272 Pfam PF02631 RecX family 84 203 3.5E-25 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 RK98_RS01155 88e35a7b53b3342fb16766cb47b44deb 272 Hamap MF_01114 Regulatory protein RecX [recX]. 42 208 15.576 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Gene3D G3DSA:3.40.50.740 316 417 4.7E-26 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Gene3D G3DSA:3.40.50.740 508 788 3.8E-76 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Pfam PF12838 4Fe-4S dicluster domain 146 204 7.6E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 SMART SM00929 84 125 4.9E-11 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 SUPERFAMILY SSF50692 794 937 2.49E-30 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Pfam PF00384 Molybdopterin oxidoreductase 314 737 7.5E-79 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 262 279 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Gene3D G3DSA:3.10.20.30 2 99 1.2E-7 T 28-03-2018 IPR012675 Beta-grasp domain RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 SUPERFAMILY SSF54862 78 210 5.44E-28 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Gene3D G3DSA:2.20.25.90 250 315 4.2E-18 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Gene3D G3DSA:3.30.70.20 100 150 0.0046 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 77 1.3E-8 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 SUPERFAMILY SSF54292 6 74 8.04E-12 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 SMART SM00926 257 311 4.1E-17 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Gene3D G3DSA:3.40.228.10 418 507 4.4E-19 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 SUPERFAMILY SSF53706 251 775 4.19E-190 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 257 311 3.0E-18 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Gene3D G3DSA:3.30.70.20 151 217 1.9E-11 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 PIRSF PIRSF036643 1 970 0.0 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Gene3D G3DSA:2.40.40.20 817 949 4.1E-23 T 28-03-2018 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 860 887 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 123 1.0E-8 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 262 935 3.7E-243 T 28-03-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 RK98_RS08585 553828b5f9ef18f3b962589173f36ca6 984 Pfam PF01568 Molydopterin dinucleotide binding domain 822 932 1.3E-18 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 RK98_RS01945 cb933399b632fa35043d10188f2247a7 72 Pfam PF16722 Pathogenicity island protein gp6 in Staphylococcus 1 72 9.4E-41 T 28-03-2018 IPR031999 Pathogenicity island protein gp6, Staphylococcus RK98_RS10225 cb933399b632fa35043d10188f2247a7 72 Pfam PF16722 Pathogenicity island protein gp6 in Staphylococcus 1 72 9.4E-41 T 28-03-2018 IPR031999 Pathogenicity island protein gp6, Staphylococcus RK98_RS13815 492c15623992a75302d9f686c0182a86 191 PIRSF PIRSF007165 1 180 1.9E-68 T 28-03-2018 IPR011188 Uncharacterised protein family UPF0302 RK98_RS13815 492c15623992a75302d9f686c0182a86 191 Pfam PF08858 IDEAL domain 137 172 4.4E-8 T 28-03-2018 IPR014957 IDEAL domain RK98_RS13815 492c15623992a75302d9f686c0182a86 191 Hamap MF_00760 UPF0302 protein . 1 175 24.866 T 28-03-2018 IPR011188 Uncharacterised protein family UPF0302 RK98_RS13815 492c15623992a75302d9f686c0182a86 191 Gene3D G3DSA:1.10.10.10 47 166 0.001 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13815 492c15623992a75302d9f686c0182a86 191 SMART SM00914 136 172 2.5E-7 T 28-03-2018 IPR014957 IDEAL domain RK98_RS13815 492c15623992a75302d9f686c0182a86 191 Pfam PF08864 UPF0302 domain 9 110 2.8E-30 T 28-03-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal RK98_RS12105 9a92a814d8afba8e27da68f1cf52362f 266 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS12105 9a92a814d8afba8e27da68f1cf52362f 266 Gene3D G3DSA:3.40.50.1860 1 112 2.4E-29 T 28-03-2018 RK98_RS12105 9a92a814d8afba8e27da68f1cf52362f 266 Gene3D G3DSA:3.40.50.1860 113 266 7.7E-39 T 28-03-2018 RK98_RS12105 9a92a814d8afba8e27da68f1cf52362f 266 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS12105 9a92a814d8afba8e27da68f1cf52362f 266 Hamap MF_00258 Glutamate racemase [murI]. 3 256 39.099 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS12105 9a92a814d8afba8e27da68f1cf52362f 266 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 215 8.3E-34 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS12105 9a92a814d8afba8e27da68f1cf52362f 266 SUPERFAMILY SSF53681 4 106 1.63E-36 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS12105 9a92a814d8afba8e27da68f1cf52362f 266 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 254 1.4E-81 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS12105 9a92a814d8afba8e27da68f1cf52362f 266 SUPERFAMILY SSF53681 108 261 5.89E-37 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS14365 4c15b3856c5b72e05abbbee939bc68d2 248 SUPERFAMILY SSF57863 79 231 1.02E-26 T 28-03-2018 RK98_RS14365 4c15b3856c5b72e05abbbee939bc68d2 248 Gene3D G3DSA:2.40.50.140 1 79 1.6E-16 T 28-03-2018 RK98_RS14365 4c15b3856c5b72e05abbbee939bc68d2 248 Pfam PF11967 Recombination protein O N terminal 2 75 1.1E-15 T 28-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal RK98_RS14365 4c15b3856c5b72e05abbbee939bc68d2 248 TIGRFAM TIGR00613 reco: DNA repair protein RecO 1 243 2.0E-78 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RK98_RS14365 4c15b3856c5b72e05abbbee939bc68d2 248 Pfam PF02565 Recombination protein O C terminal 82 237 5.9E-26 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RK98_RS14365 4c15b3856c5b72e05abbbee939bc68d2 248 SUPERFAMILY SSF50249 2 74 2.91E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS14365 4c15b3856c5b72e05abbbee939bc68d2 248 Hamap MF_00201 DNA repair protein RecO [recO]. 1 243 20.246 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PIRSF PIRSF000350 1 437 2.6E-80 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 Gene3D G3DSA:3.30.390.30 328 439 1.8E-27 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 297 1.8E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 162 180 4.7E-32 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 122 140 4.7E-32 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 245 261 4.7E-32 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.7E-32 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 295 4.7E-32 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 Gene3D G3DSA:3.50.50.60 263 317 2.2E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 Gene3D G3DSA:3.50.50.60 1 137 2.2E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.6E-54 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 6.6E-54 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 125 134 6.6E-54 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 412 432 6.6E-54 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 288 295 6.6E-54 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 325 346 6.6E-54 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 246 260 6.6E-54 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 390 405 6.6E-54 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 162 187 6.6E-54 T 28-03-2018 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 SUPERFAMILY SSF55424 325 438 2.06E-29 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 SUPERFAMILY SSF51905 1 297 1.88E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 329 436 1.4E-22 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RK98_RS03050 0fe0deba01cefcaa35075eccf87d668e 440 Gene3D G3DSA:3.50.50.60 138 262 9.4E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08780 6f04b85f77ac8f3d11738053f73bcb6a 161 Gene3D G3DSA:3.40.50.300 1 157 1.8E-14 T 28-03-2018 RK98_RS08780 6f04b85f77ac8f3d11738053f73bcb6a 161 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 2 145 6.5E-39 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RK98_RS08780 6f04b85f77ac8f3d11738053f73bcb6a 161 SUPERFAMILY SSF52540 2 127 1.74E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS08780 6f04b85f77ac8f3d11738053f73bcb6a 161 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 2 122 5.4E-28 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 RK98_RS14205 fbdf5c6b454a1359d5ce88016a980cf6 490 Gene3D G3DSA:3.40.640.10 83 344 1.9E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS14205 fbdf5c6b454a1359d5ce88016a980cf6 490 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 58.537 T 28-03-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 RK98_RS14205 fbdf5c6b454a1359d5ce88016a980cf6 490 Pfam PF00266 Aminotransferase class-V 161 280 2.1E-8 T 28-03-2018 IPR000192 Aminotransferase class V domain RK98_RS14205 fbdf5c6b454a1359d5ce88016a980cf6 490 Gene3D G3DSA:3.90.1150.10 345 470 1.9E-43 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS14205 fbdf5c6b454a1359d5ce88016a980cf6 490 SUPERFAMILY SSF53383 9 482 2.56E-111 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS01285 4051c0900aa72e08daa9939b76219b92 356 Pfam PF00817 impB/mucB/samB family 9 155 7.3E-54 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RK98_RS01285 4051c0900aa72e08daa9939b76219b92 356 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 343 1.2E-20 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RK98_RS01285 4051c0900aa72e08daa9939b76219b92 356 SUPERFAMILY SSF56672 3 236 4.18E-91 T 28-03-2018 RK98_RS01285 4051c0900aa72e08daa9939b76219b92 356 SUPERFAMILY SSF100879 240 341 7.22E-26 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RK98_RS01285 4051c0900aa72e08daa9939b76219b92 356 Gene3D G3DSA:3.30.70.270 122 172 8.6E-19 T 28-03-2018 RK98_RS01285 4051c0900aa72e08daa9939b76219b92 356 Gene3D G3DSA:3.30.70.270 43 121 1.2E-27 T 28-03-2018 RK98_RS01285 4051c0900aa72e08daa9939b76219b92 356 Gene3D G3DSA:3.30.1490.100 246 351 2.0E-28 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RK98_RS01285 4051c0900aa72e08daa9939b76219b92 356 Hamap MF_01113 DNA polymerase IV [dinB]. 3 352 37.684 T 28-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RK98_RS01285 4051c0900aa72e08daa9939b76219b92 356 Gene3D G3DSA:1.10.150.20 173 245 1.5E-14 T 28-03-2018 RK98_RS03275 75f9e936b39488e37a6e7dae9c9b95af 292 Gene3D G3DSA:3.40.50.880 4 291 1.4E-51 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS03275 75f9e936b39488e37a6e7dae9c9b95af 292 SUPERFAMILY SSF52317 53 283 7.13E-49 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS03275 75f9e936b39488e37a6e7dae9c9b95af 292 Pfam PF01965 DJ-1/PfpI family 79 204 1.2E-8 T 28-03-2018 IPR002818 DJ-1/PfpI RK98_RS03275 75f9e936b39488e37a6e7dae9c9b95af 292 PIRSF PIRSF037798 2 292 1.8E-161 T 28-03-2018 IPR017283 Protein deglycase HchA RK98_RS03275 75f9e936b39488e37a6e7dae9c9b95af 292 Hamap MF_01046 Protein deglycase HchA [hchA]. 4 292 70.115 T 28-03-2018 IPR017283 Protein deglycase HchA RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 79 91 6.6E-17 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 59 77 6.6E-17 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 6.6E-17 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 276 295 6.6E-17 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 377 390 6.6E-17 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 420 40.726 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 226 239 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 SUPERFAMILY SSF50621 263 419 3.35E-46 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 Gene3D G3DSA:3.20.20.10 34 270 4.8E-65 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 127 377 1.2E-18 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 Gene3D G3DSA:2.40.37.10 271 421 1.0E-39 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 286 5.4E-67 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 4 418 4.1E-139 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 163 172 5.0E-22 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 387 409 5.0E-22 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 77 94 5.0E-22 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 305 323 5.0E-22 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13485 8e84c287e7fe07d2c1f86a2862a3e12e 421 SUPERFAMILY SSF51419 26 288 1.44E-75 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 302 636 3.7E-119 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 148 2.3E-41 T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 1.1E-38 T 28-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 Gene3D G3DSA:3.40.930.10 1 162 2.8E-45 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 183 265 2.6E-32 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 Pfam PF02378 Phosphotransferase system, EIIC 312 581 3.9E-17 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 SUPERFAMILY SSF52794 181 277 6.28E-37 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 SUPERFAMILY SSF55804 1 148 9.29E-42 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 Gene3D G3DSA:3.40.50.2300 180 276 8.9E-40 T 28-03-2018 RK98_RS02495 d10e7f3399821d5d83314f3371153474 652 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 183 273 1.2E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS01780 515f42c9245aabb7725f23dc40831ce0 205 Pfam PF12706 Beta-lactamase superfamily domain 13 166 7.0E-9 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS01780 515f42c9245aabb7725f23dc40831ce0 205 SUPERFAMILY SSF56281 8 186 5.22E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS01780 515f42c9245aabb7725f23dc40831ce0 205 Gene3D G3DSA:3.60.15.10 2 204 3.3E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS14465 12bc1b7a5e9225a3805b057092bbaa20 324 Gene3D G3DSA:1.10.8.60 135 213 1.2E-18 T 28-03-2018 RK98_RS14465 12bc1b7a5e9225a3805b057092bbaa20 324 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 4 324 6.2E-90 T 28-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 RK98_RS14465 12bc1b7a5e9225a3805b057092bbaa20 324 Pfam PF06144 DNA polymerase III, delta subunit 8 182 3.4E-50 T 28-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 RK98_RS14465 12bc1b7a5e9225a3805b057092bbaa20 324 SUPERFAMILY SSF48019 205 324 1.04E-22 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RK98_RS14465 12bc1b7a5e9225a3805b057092bbaa20 324 Gene3D G3DSA:1.20.272.10 214 324 3.7E-31 T 28-03-2018 RK98_RS14465 12bc1b7a5e9225a3805b057092bbaa20 324 Gene3D G3DSA:3.40.50.300 3 132 3.8E-15 T 28-03-2018 RK98_RS14465 12bc1b7a5e9225a3805b057092bbaa20 324 SUPERFAMILY SSF52540 7 202 8.67E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02745 ae994f369bda69bf1ec57554c64faf66 120 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 3 119 4.0E-43 T 28-03-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain RK98_RS02745 ae994f369bda69bf1ec57554c64faf66 120 Gene3D G3DSA:3.40.50.510 1 120 4.2E-27 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RK98_RS02745 ae994f369bda69bf1ec57554c64faf66 120 SUPERFAMILY SSF53062 1 119 4.58E-32 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RK98_RS02745 ae994f369bda69bf1ec57554c64faf66 120 Pfam PF03610 PTS system fructose IIA component 3 111 1.3E-27 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 RK98_RS12325 d65f88947226dd849d709408791a55ff 238 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 2 235 9.4E-54 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase RK98_RS12325 d65f88947226dd849d709408791a55ff 238 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 9 236 2.0E-45 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase RK98_RS12325 d65f88947226dd849d709408791a55ff 238 SUPERFAMILY SSF64438 2 236 1.48E-68 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic RK98_RS12325 d65f88947226dd849d709408791a55ff 238 Gene3D G3DSA:3.60.140.10 1 238 4.4E-58 T 28-03-2018 RK98_RS02480 e975929674b088ec548604f3fd213b21 279 PIRSF PIRSF000097 1 275 1.1E-89 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS02480 e975929674b088ec548604f3fd213b21 279 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 124 141 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RK98_RS02480 e975929674b088ec548604f3fd213b21 279 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 40 57 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RK98_RS02480 e975929674b088ec548604f3fd213b21 279 Gene3D G3DSA:3.20.20.100 2 278 2.8E-99 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS02480 e975929674b088ec548604f3fd213b21 279 PRINTS PR00069 Aldo-keto reductase signature 36 60 4.7E-54 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS02480 e975929674b088ec548604f3fd213b21 279 PRINTS PR00069 Aldo-keto reductase signature 158 187 4.7E-54 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS02480 e975929674b088ec548604f3fd213b21 279 PRINTS PR00069 Aldo-keto reductase signature 124 141 4.7E-54 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS02480 e975929674b088ec548604f3fd213b21 279 PRINTS PR00069 Aldo-keto reductase signature 92 110 4.7E-54 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS02480 e975929674b088ec548604f3fd213b21 279 PRINTS PR00069 Aldo-keto reductase signature 196 220 4.7E-54 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS02480 e975929674b088ec548604f3fd213b21 279 Pfam PF00248 Aldo/keto reductase family 23 261 9.5E-56 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS02480 e975929674b088ec548604f3fd213b21 279 SUPERFAMILY SSF51430 5 265 3.4E-94 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS02770 e68a5d92b330eea5977999800383f21b 265 SUPERFAMILY SSF52540 5 230 8.76E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02770 e68a5d92b330eea5977999800383f21b 265 Pfam PF00005 ABC transporter 20 167 3.2E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02770 e68a5d92b330eea5977999800383f21b 265 SMART SM00382 28 217 3.1E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02770 e68a5d92b330eea5977999800383f21b 265 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS02770 e68a5d92b330eea5977999800383f21b 265 Gene3D G3DSA:3.40.50.300 2 238 3.5E-61 T 28-03-2018 RK98_RS07370 88c01f1c64e5be2a8ffa18b92d8e9d61 268 Gene3D G3DSA:3.10.180.10 65 225 2.3E-29 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS07370 88c01f1c64e5be2a8ffa18b92d8e9d61 268 SUPERFAMILY SSF54593 7 166 9.49E-35 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS07370 88c01f1c64e5be2a8ffa18b92d8e9d61 268 Gene3D G3DSA:3.10.180.10 2 64 6.8E-7 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS07370 88c01f1c64e5be2a8ffa18b92d8e9d61 268 SUPERFAMILY SSF54593 169 254 4.09E-14 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS07370 88c01f1c64e5be2a8ffa18b92d8e9d61 268 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 123 2.5E-12 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 PRINTS PR00988 Uridine kinase signature 79 94 2.1E-38 T 28-03-2018 RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 PRINTS PR00988 Uridine kinase signature 4 21 2.1E-38 T 28-03-2018 RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 PRINTS PR00988 Uridine kinase signature 171 184 2.1E-38 T 28-03-2018 RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 PRINTS PR00988 Uridine kinase signature 149 160 2.1E-38 T 28-03-2018 RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 PRINTS PR00988 Uridine kinase signature 34 45 2.1E-38 T 28-03-2018 RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 PRINTS PR00988 Uridine kinase signature 135 145 2.1E-38 T 28-03-2018 RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 191 3.5E-46 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 Hamap MF_00551 Uridine kinase [udk]. 1 205 40.94 T 28-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 Gene3D G3DSA:3.40.50.300 1 207 3.8E-63 T 28-03-2018 RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 SUPERFAMILY SSF52540 5 196 7.43E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14585 404e465fcccb0bac6641e1d7fb888670 207 TIGRFAM TIGR00235 udk: uridine kinase 3 204 9.9E-89 T 28-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 75 91 3.7E-5 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 3.7E-5 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 4.5E-55 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 SUPERFAMILY SSF52317 1 192 1.44E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00097 Anthranilate synthase component II signature 75 86 4.5E-31 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.5E-31 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00097 Anthranilate synthase component II signature 100 108 4.5E-31 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00097 Anthranilate synthase component II signature 48 57 4.5E-31 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00097 Anthranilate synthase component II signature 165 178 4.5E-31 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00097 Anthranilate synthase component II signature 120 132 4.5E-31 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 Pfam PF00117 Glutamine amidotransferase class-I 4 186 5.5E-45 T 28-03-2018 IPR017926 Glutamine amidotransferase RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 1.0E-13 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 1.0E-13 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 1.0E-13 T 28-03-2018 RK98_RS02430 77cf10ff874359527c091cbfc5831a42 197 Gene3D G3DSA:3.40.50.880 1 192 7.1E-49 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS01295 d0297ab454b74f1ad7415b2b25b866c4 453 Gene3D G3DSA:3.40.50.150 76 451 6.7E-64 T 28-03-2018 RK98_RS01295 d0297ab454b74f1ad7415b2b25b866c4 453 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 90 449 7.1E-24 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 RK98_RS01295 d0297ab454b74f1ad7415b2b25b866c4 453 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 17 445 1.3E-159 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 RK98_RS01295 d0297ab454b74f1ad7415b2b25b866c4 453 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 435 445 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site RK98_RS01295 d0297ab454b74f1ad7415b2b25b866c4 453 SUPERFAMILY SSF50249 4 60 6.28E-12 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS01295 d0297ab454b74f1ad7415b2b25b866c4 453 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 384 415 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site RK98_RS01295 d0297ab454b74f1ad7415b2b25b866c4 453 SUPERFAMILY SSF53335 69 450 7.21E-85 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS01295 d0297ab454b74f1ad7415b2b25b866c4 453 Gene3D G3DSA:2.40.50.140 2 75 1.8E-20 T 28-03-2018 RK98_RS01885 abdc12260e3e1e05e45cb3cc942f4685 338 Gene3D G3DSA:2.70.240.10 36 327 3.9E-96 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS01885 abdc12260e3e1e05e45cb3cc942f4685 338 TIGRFAM TIGR01002 hlyII: beta-channel forming cytolysin 21 327 4.1E-78 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS01885 abdc12260e3e1e05e45cb3cc942f4685 338 Pfam PF07968 Leukocidin/Hemolysin toxin family 65 323 1.6E-87 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS01885 abdc12260e3e1e05e45cb3cc942f4685 338 SUPERFAMILY SSF56959 33 337 3.27E-101 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS01885 abdc12260e3e1e05e45cb3cc942f4685 338 PRINTS PR01468 Staphylococcal bi-component toxin signature 69 88 2.1E-17 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS01885 abdc12260e3e1e05e45cb3cc942f4685 338 PRINTS PR01468 Staphylococcal bi-component toxin signature 131 152 2.1E-17 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS01885 abdc12260e3e1e05e45cb3cc942f4685 338 PRINTS PR01468 Staphylococcal bi-component toxin signature 254 271 2.1E-17 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS13600 0dba8cea89cf0524068e79959c835a12 73 SUPERFAMILY SSF140652 5 71 4.84E-24 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS13600 0dba8cea89cf0524068e79959c835a12 73 Gene3D G3DSA:1.10.150.260 5 69 5.3E-26 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS13600 0dba8cea89cf0524068e79959c835a12 73 Pfam PF06855 YozE SAM-like fold 5 68 1.8E-23 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS13600 0dba8cea89cf0524068e79959c835a12 73 Hamap MF_01538 UPF0346 protein . 2 70 21.841 T 28-03-2018 IPR010673 Protein of unknown function UPF0346 RK98_RS13600 0dba8cea89cf0524068e79959c835a12 73 PIRSF PIRSF037262 2 72 2.8E-28 T 28-03-2018 IPR010673 Protein of unknown function UPF0346 RK98_RS13990 5149ccc125f7cdba6764e2c6c9764fb2 245 Gene3D G3DSA:3.10.290.10 1 74 6.1E-19 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS13990 5149ccc125f7cdba6764e2c6c9764fb2 245 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 103 117 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RK98_RS13990 5149ccc125f7cdba6764e2c6c9764fb2 245 Gene3D G3DSA:3.30.2350.10 75 245 1.7E-39 T 28-03-2018 RK98_RS13990 5149ccc125f7cdba6764e2c6c9764fb2 245 SMART SM00363 6 65 2.8E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS13990 5149ccc125f7cdba6764e2c6c9764fb2 245 Pfam PF01479 S4 domain 6 52 3.1E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS13990 5149ccc125f7cdba6764e2c6c9764fb2 245 Pfam PF00849 RNA pseudouridylate synthase 66 200 4.8E-23 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS13990 5149ccc125f7cdba6764e2c6c9764fb2 245 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 70 230 1.0E-49 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RK98_RS13990 5149ccc125f7cdba6764e2c6c9764fb2 245 SUPERFAMILY SSF55120 50 242 1.13E-44 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS13990 5149ccc125f7cdba6764e2c6c9764fb2 245 SUPERFAMILY SSF55174 6 71 9.22E-15 T 28-03-2018 RK98_RS00125 8d670de160c0301fc1c9bf6cce2e1830 154 SUPERFAMILY SSF55781 15 149 8.07E-41 T 28-03-2018 IPR029016 GAF domain-like RK98_RS00125 8d670de160c0301fc1c9bf6cce2e1830 154 Gene3D G3DSA:3.30.450.40 11 154 5.7E-24 T 28-03-2018 IPR029016 GAF domain-like RK98_RS00125 8d670de160c0301fc1c9bf6cce2e1830 154 SMART SM00065 11 154 0.0055 T 28-03-2018 IPR003018 GAF domain GO:0005515 RK98_RS00125 8d670de160c0301fc1c9bf6cce2e1830 154 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 92 109 - T 28-03-2018 IPR000614 Free Met sulfoxide reductase conserved site RK98_RS00125 8d670de160c0301fc1c9bf6cce2e1830 154 Pfam PF13185 GAF domain 47 146 1.0E-10 T 28-03-2018 IPR003018 GAF domain GO:0005515 RK98_RS03830 fc3e547bb86b9628e344bb9634c92427 131 ProSitePatterns PS00893 Nudix box signature. 31 52 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RK98_RS03830 fc3e547bb86b9628e344bb9634c92427 131 Pfam PF00293 NUDIX domain 6 107 2.3E-11 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RK98_RS03830 fc3e547bb86b9628e344bb9634c92427 131 Gene3D G3DSA:3.90.79.10 2 125 1.1E-16 T 28-03-2018 RK98_RS03830 fc3e547bb86b9628e344bb9634c92427 131 SUPERFAMILY SSF55811 4 125 6.77E-21 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 RK98_RS10260 8e97a57795762749dcd811f51e66590c 304 SUPERFAMILY SSF53807 38 295 3.85E-45 T 28-03-2018 RK98_RS10260 8e97a57795762749dcd811f51e66590c 304 Gene3D G3DSA:3.40.50.1980 30 142 2.0E-18 T 28-03-2018 RK98_RS10260 8e97a57795762749dcd811f51e66590c 304 Pfam PF01497 Periplasmic binding protein 51 277 3.7E-51 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RK98_RS10260 8e97a57795762749dcd811f51e66590c 304 Gene3D G3DSA:3.40.50.1980 143 304 4.9E-22 T 28-03-2018 RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 PIRSF PIRSF003095 1 433 9.0E-129 T 28-03-2018 IPR005215 Trigger factor GO:0015031 RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 Gene3D G3DSA:3.30.70.1050 1 119 1.3E-40 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 TIGRFAM TIGR00115 tig: trigger factor 13 420 5.3E-136 T 28-03-2018 IPR005215 Trigger factor GO:0015031 RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 232 1.4E-15 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 SUPERFAMILY SSF102735 1 131 5.75E-42 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 SUPERFAMILY SSF54534 89 243 1.69E-35 T 28-03-2018 RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 SUPERFAMILY SSF109998 250 428 4.19E-40 T 28-03-2018 IPR027304 Trigger factor/SurA domain RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 Hamap MF_00303 Trigger factor [tig]. 1 427 23.323 T 28-03-2018 IPR005215 Trigger factor GO:0015031 RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 420 4.2E-45 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 Gene3D G3DSA:1.10.3120.10 213 399 2.9E-49 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 RK98_RS14935 73f60b4b8f6b8f42696534cd75678a52 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 3.6E-46 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 RK98_RS08825 78f18a68dc452b38706296260bd0b0b9 403 Gene3D G3DSA:1.20.1250.20 213 401 5.6E-17 T 28-03-2018 RK98_RS08825 78f18a68dc452b38706296260bd0b0b9 403 Pfam PF07690 Major Facilitator Superfamily 21 300 8.5E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS08825 78f18a68dc452b38706296260bd0b0b9 403 SUPERFAMILY SSF103473 15 396 1.02E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS08825 78f18a68dc452b38706296260bd0b0b9 403 Gene3D G3DSA:1.20.1250.20 12 205 4.6E-26 T 28-03-2018 RK98_RS03235 58339607b73046d727ec9777718b14e8 289 SUPERFAMILY SSF56784 1 284 2.04E-70 T 28-03-2018 IPR023214 HAD-like domain RK98_RS03235 58339607b73046d727ec9777718b14e8 289 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 280 6.9E-73 T 28-03-2018 IPR023214 HAD-like domain RK98_RS03235 58339607b73046d727ec9777718b14e8 289 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 253 2.5E-26 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RK98_RS03235 58339607b73046d727ec9777718b14e8 289 Gene3D G3DSA:3.30.1240.10 24 89 7.9E-9 T 28-03-2018 RK98_RS03235 58339607b73046d727ec9777718b14e8 289 Gene3D G3DSA:3.30.1240.10 90 207 2.1E-26 T 28-03-2018 RK98_RS03235 58339607b73046d727ec9777718b14e8 289 Gene3D G3DSA:3.40.50.1000 1 23 0.18 T 28-03-2018 IPR023214 HAD-like domain RK98_RS03235 58339607b73046d727ec9777718b14e8 289 ProSitePatterns PS01229 Hypothetical cof family signature 2. 234 256 - T 28-03-2018 RK98_RS03235 58339607b73046d727ec9777718b14e8 289 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 28-03-2018 RK98_RS03235 58339607b73046d727ec9777718b14e8 289 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 280 8.0E-63 T 28-03-2018 IPR000150 Cof family GO:0016787 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 Pfam PF00710 Asparaginase, N-terminal 4 190 1.7E-59 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 PIRSF PIRSF001220 1 322 4.2E-90 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 80 90 - T 28-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 Gene3D G3DSA:3.40.50.1170 1 204 1.1E-54 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 PIRSF PIRSF500176 1 322 1.6E-91 T 28-03-2018 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 SMART SM00870 3 317 5.7E-133 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 28-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 Gene3D G3DSA:3.40.50.40 205 322 1.8E-27 T 28-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 SUPERFAMILY SSF53774 1 321 6.54E-100 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 PRINTS PR00139 Asparaginase/glutaminase family signature 79 97 3.3E-14 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 PRINTS PR00139 Asparaginase/glutaminase family signature 252 270 3.3E-14 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 RK98_RS13910 f6094dda4ad1009cb2508a7194ef4e2d 322 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 3.3E-14 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 RK98_RS11065 9e95c5e9231a13189b4dede7743550ed 197 PIRSF PIRSF001467 146 197 1.3E-9 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 RK98_RS11065 9e95c5e9231a13189b4dede7743550ed 197 PIRSF PIRSF001467 5 127 1.9E-42 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 RK98_RS11065 9e95c5e9231a13189b4dede7743550ed 197 Gene3D G3DSA:2.40.100.10 2 197 6.1E-66 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS11065 9e95c5e9231a13189b4dede7743550ed 197 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 57 69 2.5E-19 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RK98_RS11065 9e95c5e9231a13189b4dede7743550ed 197 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 114 2.5E-19 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RK98_RS11065 9e95c5e9231a13189b4dede7743550ed 197 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 31 46 2.5E-19 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RK98_RS11065 9e95c5e9231a13189b4dede7743550ed 197 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 18 194 1.8E-47 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 RK98_RS11065 9e95c5e9231a13189b4dede7743550ed 197 SUPERFAMILY SSF50891 18 118 9.35E-59 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS11065 9e95c5e9231a13189b4dede7743550ed 197 SUPERFAMILY SSF50891 147 195 9.35E-59 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS02805 c197dfbc4e52fd7165f927eee57e878e 353 SUPERFAMILY SSF53448 1 246 1.31E-22 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS02805 c197dfbc4e52fd7165f927eee57e878e 353 Pfam PF00535 Glycosyl transferase family 2 4 138 6.3E-11 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RK98_RS02805 c197dfbc4e52fd7165f927eee57e878e 353 Gene3D G3DSA:3.90.550.10 1 350 1.1E-18 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS13605 c386273f95f50c9cd1ec65b69a2eaed6 166 SUPERFAMILY SSF51261 9 159 1.74E-54 T 28-03-2018 IPR011055 Duplicated hybrid motif RK98_RS13605 c386273f95f50c9cd1ec65b69a2eaed6 166 Gene3D G3DSA:2.70.70.10 5 165 4.1E-61 T 28-03-2018 RK98_RS13605 c386273f95f50c9cd1ec65b69a2eaed6 166 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 18 138 2.5E-45 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS13605 c386273f95f50c9cd1ec65b69a2eaed6 166 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 80 92 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS13605 c386273f95f50c9cd1ec65b69a2eaed6 166 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 17 141 1.3E-52 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS07360 36b68e60a6da7c9826197bc93bd6408c 330 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 176 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RK98_RS07360 36b68e60a6da7c9826197bc93bd6408c 330 Gene3D G3DSA:3.40.50.720 1 114 6.5E-20 T 28-03-2018 RK98_RS07360 36b68e60a6da7c9826197bc93bd6408c 330 Gene3D G3DSA:3.40.50.720 115 301 3.4E-48 T 28-03-2018 RK98_RS07360 36b68e60a6da7c9826197bc93bd6408c 330 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK98_RS07360 36b68e60a6da7c9826197bc93bd6408c 330 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 330 2.4E-24 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RK98_RS07360 36b68e60a6da7c9826197bc93bd6408c 330 SUPERFAMILY SSF51735 103 299 2.73E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS07360 36b68e60a6da7c9826197bc93bd6408c 330 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 298 5.3E-51 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RK98_RS07360 36b68e60a6da7c9826197bc93bd6408c 330 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK98_RS07360 36b68e60a6da7c9826197bc93bd6408c 330 SUPERFAMILY SSF52283 1 136 4.89E-35 T 28-03-2018 RK98_RS07455 2cab78ac3325e835455246f37951c83e 254 SUPERFAMILY SSF46955 4 119 6.96E-25 T 28-03-2018 IPR009061 Putative DNA-binding domain RK98_RS07455 2cab78ac3325e835455246f37951c83e 254 Gene3D G3DSA:1.10.1660.10 60 139 4.5E-5 T 28-03-2018 RK98_RS07455 2cab78ac3325e835455246f37951c83e 254 Pfam PF13411 MerR HTH family regulatory protein 4 71 1.9E-16 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS07455 2cab78ac3325e835455246f37951c83e 254 Gene3D G3DSA:2.20.28.10 188 231 8.0E-4 T 28-03-2018 RK98_RS07455 2cab78ac3325e835455246f37951c83e 254 Gene3D G3DSA:1.10.1660.10 1 59 5.7E-19 T 28-03-2018 RK98_RS07455 2cab78ac3325e835455246f37951c83e 254 SMART SM00422 4 73 1.9E-20 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS07455 2cab78ac3325e835455246f37951c83e 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 9.9E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS07455 2cab78ac3325e835455246f37951c83e 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 9.9E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS07455 2cab78ac3325e835455246f37951c83e 254 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 9.9E-5 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 Pfam PF13932 GidA associated domain 399 612 1.9E-79 T 28-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 617 2.8E-288 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 620 41.945 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 SMART SM01228 542 613 2.6E-41 T 28-03-2018 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 Pfam PF01134 Glucose inhibited division protein A 6 394 9.3E-169 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 Gene3D G3DSA:3.50.50.60 2 262 5.2E-67 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 SUPERFAMILY SSF51905 3 64 1.74E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 SUPERFAMILY SSF51905 95 258 1.74E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 1.6E-5 T 28-03-2018 RK98_RS06345 5517487f994ef6e601a86d32fdfce351 625 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 1.6E-5 T 28-03-2018 RK98_RS04875 f1d04648525c92785483a6c93817005d 219 SMART SM00382 26 204 2.2E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS04875 f1d04648525c92785483a6c93817005d 219 Gene3D G3DSA:3.40.50.300 1 212 7.4E-55 T 28-03-2018 RK98_RS04875 f1d04648525c92785483a6c93817005d 219 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS04875 f1d04648525c92785483a6c93817005d 219 SUPERFAMILY SSF52540 6 201 1.38E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04875 f1d04648525c92785483a6c93817005d 219 Pfam PF00005 ABC transporter 18 155 1.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS03925 8d8f9bde68e7dc9d8aea2c680bdba58c 400 SMART SM00833 260 375 6.7E-46 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK98_RS03925 8d8f9bde68e7dc9d8aea2c680bdba58c 400 Gene3D G3DSA:3.40.50.300 1 229 1.4E-52 T 28-03-2018 RK98_RS03925 8d8f9bde68e7dc9d8aea2c680bdba58c 400 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 375 6.8E-26 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK98_RS03925 8d8f9bde68e7dc9d8aea2c680bdba58c 400 Gene3D G3DSA:3.30.1220.10 241 376 7.0E-32 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK98_RS03925 8d8f9bde68e7dc9d8aea2c680bdba58c 400 SUPERFAMILY SSF52540 3 311 1.95E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03925 8d8f9bde68e7dc9d8aea2c680bdba58c 400 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 210 3.2E-59 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RK98_RS04765 66d36197055795526ed8e1b7334142af 153 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 152 1.9E-72 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04765 66d36197055795526ed8e1b7334142af 153 SUPERFAMILY SSF160424 3 153 6.93E-55 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04765 66d36197055795526ed8e1b7334142af 153 Pfam PF04634 Protein of unknown function, DUF600 7 149 3.9E-45 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04765 66d36197055795526ed8e1b7334142af 153 Gene3D G3DSA:3.30.500.20 4 116 8.6E-34 T 28-03-2018 RK98_RS04670 1c48531a1f24275f0759de8290599c47 286 Gene3D G3DSA:3.30.420.40 122 286 9.8E-29 T 28-03-2018 RK98_RS04670 1c48531a1f24275f0759de8290599c47 286 Gene3D G3DSA:3.30.420.40 1 121 2.6E-16 T 28-03-2018 RK98_RS04670 1c48531a1f24275f0759de8290599c47 286 SUPERFAMILY SSF53067 2 285 1.11E-37 T 28-03-2018 RK98_RS04670 1c48531a1f24275f0759de8290599c47 286 Pfam PF00480 ROK family 3 284 2.6E-36 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 RK98_RS12415 e9a875ad30069fec7ecba03b54644001 230 SUPERFAMILY SSF51366 2 228 1.11E-68 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RK98_RS12415 e9a875ad30069fec7ecba03b54644001 230 Gene3D G3DSA:3.20.20.70 2 229 1.1E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS12415 e9a875ad30069fec7ecba03b54644001 230 SMART SM00934 4 224 3.7E-90 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12415 e9a875ad30069fec7ecba03b54644001 230 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 225 6.4E-62 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12415 e9a875ad30069fec7ecba03b54644001 230 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 229 39.537 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12415 e9a875ad30069fec7ecba03b54644001 230 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 223 5.9E-47 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12415 e9a875ad30069fec7ecba03b54644001 230 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 55 68 - T 28-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 Gene3D G3DSA:1.25.40.80 194 277 3.4E-18 T 28-03-2018 RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 PRINTS PR00147 DNA photolyase signature 325 343 1.8E-25 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 PRINTS PR00147 DNA photolyase signature 364 378 1.8E-25 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 PRINTS PR00147 DNA photolyase signature 305 321 1.8E-25 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 PRINTS PR00147 DNA photolyase signature 137 153 1.8E-25 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 Pfam PF00875 DNA photolyase 5 155 2.5E-11 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 Gene3D G3DSA:3.40.50.620 2 160 2.9E-16 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 Pfam PF03441 FAD binding domain of DNA photolyase 256 454 9.6E-75 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 SUPERFAMILY SSF52425 5 190 1.83E-23 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 SUPERFAMILY SSF48173 195 455 1.23E-90 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 RK98_RS02540 8df8deed9e6bb6cc9ea963a5caf89f9e 457 Gene3D G3DSA:1.10.579.10 278 457 4.5E-66 T 28-03-2018 RK98_RS10385 28b20f1431f9934b761202a2b64f2dd5 140 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 136 1.4E-45 T 28-03-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 RK98_RS10385 28b20f1431f9934b761202a2b64f2dd5 140 Gene3D G3DSA:2.20.25.10 1 41 1.8E-10 T 28-03-2018 RK98_RS10385 28b20f1431f9934b761202a2b64f2dd5 140 Gene3D G3DSA:3.30.300.20 42 140 1.2E-22 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta RK98_RS10385 28b20f1431f9934b761202a2b64f2dd5 140 Pfam PF02566 OsmC-like protein 37 134 7.6E-18 T 28-03-2018 IPR003718 OsmC/Ohr family RK98_RS10385 28b20f1431f9934b761202a2b64f2dd5 140 SUPERFAMILY SSF82784 1 137 4.06E-35 T 28-03-2018 IPR003718 OsmC/Ohr family RK98_RS04990 dd8cb50468470f2ec8802e35465d19cc 562 SUPERFAMILY SSF53756 262 559 1.65E-17 T 28-03-2018 RK98_RS04990 dd8cb50468470f2ec8802e35465d19cc 562 Gene3D G3DSA:3.40.50.2000 384 528 0.0012 T 28-03-2018 RK98_RS04990 dd8cb50468470f2ec8802e35465d19cc 562 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 199 560 1.3E-107 T 28-03-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 RK98_RS08630 e67164a27a85dff816c24a156c986c5b 360 SUPERFAMILY SSF51735 1 164 1.66E-14 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS08630 e67164a27a85dff816c24a156c986c5b 360 SUPERFAMILY SSF48179 189 356 2.01E-41 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS08630 e67164a27a85dff816c24a156c986c5b 360 Gene3D G3DSA:1.10.1040.10 196 352 1.8E-41 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RK98_RS08630 e67164a27a85dff816c24a156c986c5b 360 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 187 333 2.4E-36 T 28-03-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 RK98_RS08630 e67164a27a85dff816c24a156c986c5b 360 Gene3D G3DSA:3.40.50.720 1 194 7.5E-14 T 28-03-2018 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 145 2.5E-25 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 4 518 3.5E-195 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 Pfam PF00009 Elongation factor Tu GTP binding domain 12 270 3.0E-55 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 Gene3D G3DSA:2.40.30.10 265 385 3.7E-23 T 28-03-2018 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 Pfam PF16658 Class II release factor RF3, C-terminal domain 382 507 1.9E-45 T 28-03-2018 IPR032090 Peptide chain release factor 3, C-terminal RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 Gene3D G3DSA:3.40.50.300 3 264 8.6E-41 T 28-03-2018 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 SUPERFAMILY SSF54980 388 459 2.05E-17 T 28-03-2018 IPR035647 EF-G domain III/V-like RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 520 49.617 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 SUPERFAMILY SSF50447 255 379 4.95E-26 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 Pfam PF03144 Elongation factor Tu domain 2 308 373 2.2E-12 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 SUPERFAMILY SSF52540 7 270 7.04E-90 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 PRINTS PR00315 GTP-binding elongation factor signature 98 109 1.9E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 PRINTS PR00315 GTP-binding elongation factor signature 134 143 1.9E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 PRINTS PR00315 GTP-binding elongation factor signature 62 70 1.9E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.9E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 PRINTS PR00315 GTP-binding elongation factor signature 82 92 1.9E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS11385 40c0663c4792dbe2f1986fb7469a10f5 520 Gene3D G3DSA:3.30.70.870 388 460 3.2E-13 T 28-03-2018 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 Gene3D G3DSA:3.90.110.10 147 318 9.9E-49 T 28-03-2018 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 314 44.427 T 28-03-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 1.3E-40 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 1.3E-40 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 1.3E-40 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 1.3E-40 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 1.3E-40 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 145 7.6E-45 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 SUPERFAMILY SSF56327 146 313 2.59E-55 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 312 7.5E-35 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 307 1.6E-126 T 28-03-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 SUPERFAMILY SSF51735 4 145 9.72E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 PIRSF PIRSF000102 4 318 7.7E-106 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 Gene3D G3DSA:3.40.50.720 7 146 7.6E-34 T 28-03-2018 RK98_RS06945 47a7b8d4793e5681e947cd4d7c779516 319 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 28-03-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 RK98_RS00180 e43a08fc8cce4574a0f5f072c5c97f3d 488 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 427 444 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS00180 e43a08fc8cce4574a0f5f072c5c97f3d 488 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 485 8.9E-216 T 28-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 RK98_RS00180 e43a08fc8cce4574a0f5f072c5c97f3d 488 Pfam PF02378 Phosphotransferase system, EIIC 10 316 3.8E-69 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS00180 e43a08fc8cce4574a0f5f072c5c97f3d 488 Pfam PF00367 phosphotransferase system, EIIB 417 449 1.7E-15 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS00180 e43a08fc8cce4574a0f5f072c5c97f3d 488 Gene3D G3DSA:3.30.1360.60 412 488 7.6E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS00180 e43a08fc8cce4574a0f5f072c5c97f3d 488 SUPERFAMILY SSF55604 414 487 2.48E-21 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 294 309 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 624 69.882 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 SMART SM00493 2 125 9.3E-17 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 Gene3D G3DSA:3.40.50.140 2 153 3.6E-42 T 28-03-2018 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 SMART SM00437 257 535 8.3E-67 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 695 5.8E-203 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 498 512 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 382 398 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 185 203 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 SMART SM00436 125 215 1.0E-32 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 Pfam PF01751 Toprim domain 4 133 1.4E-15 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 Pfam PF01131 DNA topoisomerase 151 569 7.9E-111 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 Gene3D G3DSA:3.30.65.10 587 635 1.3E-7 T 28-03-2018 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 SUPERFAMILY SSF56712 2 585 6.28E-168 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 Gene3D G3DSA:2.20.25.10 636 673 0.041 T 28-03-2018 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 Gene3D G3DSA:1.10.460.10 158 337 5.9E-39 T 28-03-2018 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 Gene3D G3DSA:1.10.460.10 456 586 6.6E-19 T 28-03-2018 RK98_RS08895 ecb1c39ac15d7921d99e8572a0d1c5f8 711 Gene3D G3DSA:2.70.20.10 344 455 7.8E-24 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RK98_RS05685 841d063da05e310ad39ead720a955fab 254 Pfam PF02195 ParB-like nuclease domain 17 76 5.4E-9 T 28-03-2018 IPR003115 ParB/Sulfiredoxin RK98_RS05685 841d063da05e310ad39ead720a955fab 254 PIRSF PIRSF032543 1 254 1.4E-188 T 28-03-2018 IPR016999 Uncharacterised conserved protein UCP032543, ParB-like nuclease RK98_RS05685 841d063da05e310ad39ead720a955fab 254 SMART SM00470 9 92 0.0022 T 28-03-2018 IPR003115 ParB/Sulfiredoxin RK98_RS05685 841d063da05e310ad39ead720a955fab 254 Gene3D G3DSA:3.90.1530.10 1 90 4.8E-10 T 28-03-2018 RK98_RS05685 841d063da05e310ad39ead720a955fab 254 SUPERFAMILY SSF110849 7 219 3.77E-50 T 28-03-2018 IPR003115 ParB/Sulfiredoxin RK98_RS14110 d56e830afe17feda7a377837886324c4 424 SUPERFAMILY SSF47005 117 162 4.32E-11 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS14110 d56e830afe17feda7a377837886324c4 424 Gene3D G3DSA:3.90.1170.30 1 45 7.8E-14 T 28-03-2018 RK98_RS14110 d56e830afe17feda7a377837886324c4 424 SUPERFAMILY SSF52777 195 416 3.91E-81 T 28-03-2018 RK98_RS14110 d56e830afe17feda7a377837886324c4 424 Pfam PF00364 Biotin-requiring enzyme 2 74 1.4E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment RK98_RS14110 d56e830afe17feda7a377837886324c4 424 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RK98_RS14110 d56e830afe17feda7a377837886324c4 424 Gene3D G3DSA:4.10.320.10 117 176 3.2E-15 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS14110 d56e830afe17feda7a377837886324c4 424 Pfam PF02817 e3 binding domain 124 156 2.2E-10 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS14110 d56e830afe17feda7a377837886324c4 424 Gene3D G3DSA:2.40.50.100 46 116 4.0E-9 T 28-03-2018 RK98_RS14110 d56e830afe17feda7a377837886324c4 424 Gene3D G3DSA:3.30.559.10 177 422 1.7E-84 T 28-03-2018 RK98_RS14110 d56e830afe17feda7a377837886324c4 424 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 193 416 1.4E-80 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 RK98_RS14110 d56e830afe17feda7a377837886324c4 424 SUPERFAMILY SSF51230 2 91 5.89E-26 T 28-03-2018 IPR011053 Single hybrid motif RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01997 Phage major tail protein 2 family signature 23 45 7.0E-57 T 28-03-2018 IPR022345 Bacteriophage 69, Orf23, major tail protein RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01997 Phage major tail protein 2 family signature 104 125 7.0E-57 T 28-03-2018 IPR022345 Bacteriophage 69, Orf23, major tail protein RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01997 Phage major tail protein 2 family signature 128 147 7.0E-57 T 28-03-2018 IPR022345 Bacteriophage 69, Orf23, major tail protein RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01997 Phage major tail protein 2 family signature 75 93 7.0E-57 T 28-03-2018 IPR022345 Bacteriophage 69, Orf23, major tail protein RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01997 Phage major tail protein 2 family signature 45 63 7.0E-57 T 28-03-2018 IPR022345 Bacteriophage 69, Orf23, major tail protein RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 Pfam PF06199 Phage tail tube protein 5 141 3.3E-36 T 28-03-2018 IPR011855 Phage major tail protein TP901-1 RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 TIGRFAM TIGR02126 phgtail_TP901_1: phage major tail protein, TP901-1 family 9 137 1.5E-14 T 28-03-2018 IPR011855 Phage major tail protein TP901-1 RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01998 Staphylococcal phage major tail protein signature 173 185 1.5E-93 T 28-03-2018 RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01998 Staphylococcal phage major tail protein signature 104 122 1.5E-93 T 28-03-2018 RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01998 Staphylococcal phage major tail protein signature 9 32 1.5E-93 T 28-03-2018 RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01998 Staphylococcal phage major tail protein signature 65 93 1.5E-93 T 28-03-2018 RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01998 Staphylococcal phage major tail protein signature 36 59 1.5E-93 T 28-03-2018 RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01998 Staphylococcal phage major tail protein signature 153 171 1.5E-93 T 28-03-2018 RK98_RS10755 a7b9431fda1812a6a0fabfa850d9fcd0 193 PRINTS PR01998 Staphylococcal phage major tail protein signature 125 148 1.5E-93 T 28-03-2018 RK98_RS12795 8103ebdcabaa9233423c0aedb3b5e10f 557 Pfam PF00753 Metallo-beta-lactamase superfamily 23 165 1.2E-6 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS12795 8103ebdcabaa9233423c0aedb3b5e10f 557 PIRSF PIRSF004803 3 557 4.9E-196 T 28-03-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 RK98_RS12795 8103ebdcabaa9233423c0aedb3b5e10f 557 Gene3D G3DSA:3.60.15.10 3 450 9.1E-54 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS12795 8103ebdcabaa9233423c0aedb3b5e10f 557 SMART SM00849 23 217 6.6E-22 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS12795 8103ebdcabaa9233423c0aedb3b5e10f 557 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 363 409 1.0E-9 T 28-03-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain RK98_RS12795 8103ebdcabaa9233423c0aedb3b5e10f 557 SUPERFAMILY SSF56281 11 424 8.52E-74 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS12795 8103ebdcabaa9233423c0aedb3b5e10f 557 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 11 554 1.4E-182 T 28-03-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 RK98_RS12795 8103ebdcabaa9233423c0aedb3b5e10f 557 Hamap MF_01491 Ribonuclease J [rnj]. 6 557 43.516 T 28-03-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 RK98_RS04640 e5912fefed47958a2e7fdb3c0ac9f8a9 399 Gene3D G3DSA:3.20.20.70 2 381 1.0E-87 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS04640 e5912fefed47958a2e7fdb3c0ac9f8a9 399 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 11 345 1.2E-55 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RK98_RS04640 e5912fefed47958a2e7fdb3c0ac9f8a9 399 SUPERFAMILY SSF51395 4 346 2.07E-82 T 28-03-2018 RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 SUPERFAMILY SSF52794 2 104 2.09E-38 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 Gene3D G3DSA:3.40.50.2300 2 98 8.2E-39 T 28-03-2018 RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 Pfam PF02378 Phosphotransferase system, EIIC 130 405 4.9E-24 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 Gene3D G3DSA:3.40.930.10 502 650 6.9E-34 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 SUPERFAMILY SSF55804 505 649 2.75E-35 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 553 569 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 511 649 3.7E-33 T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 7.1E-33 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 508 634 1.0E-44 T 28-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 93 4.3E-16 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS06695 4a9b79594502b805a3bf540c88009f4e 650 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 121 457 4.2E-93 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 RK98_RS05520 c5b8f55a1c5ed36c1e23c4faf28fe5c8 374 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 28 360 1.2E-88 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 RK98_RS05520 c5b8f55a1c5ed36c1e23c4faf28fe5c8 374 Gene3D G3DSA:3.40.50.2000 203 344 5.6E-19 T 28-03-2018 RK98_RS05520 c5b8f55a1c5ed36c1e23c4faf28fe5c8 374 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 363 9.6E-75 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 RK98_RS05520 c5b8f55a1c5ed36c1e23c4faf28fe5c8 374 Gene3D G3DSA:3.40.50.2000 1 202 9.9E-72 T 28-03-2018 RK98_RS05520 c5b8f55a1c5ed36c1e23c4faf28fe5c8 374 SUPERFAMILY SSF53756 3 372 1.52E-105 T 28-03-2018 RK98_RS14295 bb37b78fa088ad44f265335fd804856f 691 SUPERFAMILY SSF56601 320 681 1.15E-61 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like RK98_RS14295 bb37b78fa088ad44f265335fd804856f 691 SUPERFAMILY SSF56519 62 123 2.88E-35 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RK98_RS14295 bb37b78fa088ad44f265335fd804856f 691 SUPERFAMILY SSF56519 188 319 2.88E-35 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RK98_RS14295 bb37b78fa088ad44f265335fd804856f 691 Pfam PF00905 Penicillin binding protein transpeptidase domain 351 656 8.1E-59 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RK98_RS14295 bb37b78fa088ad44f265335fd804856f 691 Gene3D G3DSA:3.40.710.10 320 691 5.3E-73 T 28-03-2018 RK98_RS14295 bb37b78fa088ad44f265335fd804856f 691 Gene3D G3DSA:3.90.1310.10 34 319 3.8E-39 T 28-03-2018 RK98_RS14295 bb37b78fa088ad44f265335fd804856f 691 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 303 3.4E-39 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RK98_RS14315 dfdf4be210932aa12cce446c9253a41d 261 SUPERFAMILY SSF52540 7 236 4.58E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14315 dfdf4be210932aa12cce446c9253a41d 261 Pfam PF00005 ABC transporter 26 175 2.3E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS14315 dfdf4be210932aa12cce446c9253a41d 261 SMART SM00382 35 230 1.4E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS14315 dfdf4be210932aa12cce446c9253a41d 261 Gene3D G3DSA:3.40.50.300 2 245 3.9E-63 T 28-03-2018 RK98_RS14315 dfdf4be210932aa12cce446c9253a41d 261 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS03860 8bf9c8994fd6c23f70f4516719b8602f 380 PIRSF PIRSF001434 1 380 5.9E-140 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RK98_RS03860 8bf9c8994fd6c23f70f4516719b8602f 380 Gene3D G3DSA:3.40.640.10 1 246 2.6E-57 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS03860 8bf9c8994fd6c23f70f4516719b8602f 380 Gene3D G3DSA:3.90.1150.10 247 380 5.7E-44 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS03860 8bf9c8994fd6c23f70f4516719b8602f 380 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 377 9.0E-147 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RK98_RS03860 8bf9c8994fd6c23f70f4516719b8602f 380 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RK98_RS03860 8bf9c8994fd6c23f70f4516719b8602f 380 SUPERFAMILY SSF53383 6 378 7.93E-114 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS02820 d3629e141a08e16092daf98351a626f6 264 SUPERFAMILY SSF52540 35 234 4.02E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02820 d3629e141a08e16092daf98351a626f6 264 Pfam PF00005 ABC transporter 40 171 2.2E-15 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02820 d3629e141a08e16092daf98351a626f6 264 SMART SM00382 49 228 2.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02820 d3629e141a08e16092daf98351a626f6 264 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS02820 d3629e141a08e16092daf98351a626f6 264 Gene3D G3DSA:3.40.50.300 1 260 5.7E-46 T 28-03-2018 RK98_RS02335 ce1c43bb0682b0594bb67dbb6539ae78 166 Pfam PF14489 QueF-like protein 63 141 3.5E-35 T 28-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RK98_RS02335 ce1c43bb0682b0594bb67dbb6539ae78 166 SUPERFAMILY SSF55620 29 136 4.52E-28 T 28-03-2018 RK98_RS02335 ce1c43bb0682b0594bb67dbb6539ae78 166 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 166 70.498 T 28-03-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RK98_RS02335 ce1c43bb0682b0594bb67dbb6539ae78 166 PIRSF PIRSF027377 9 148 9.5E-63 T 28-03-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RK98_RS02335 ce1c43bb0682b0594bb67dbb6539ae78 166 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 29 139 1.8E-53 T 28-03-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 RK98_RS02335 ce1c43bb0682b0594bb67dbb6539ae78 166 Gene3D G3DSA:3.30.1130.10 22 166 1.6E-42 T 28-03-2018 RK98_RS10975 39df4522725e945663d273749c56823d 80 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 17 79 6.0E-30 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 RK98_RS10975 39df4522725e945663d273749c56823d 80 SUPERFAMILY SSF117916 3 79 8.72E-26 T 28-03-2018 IPR034904 Fe-S cluster assembly domain RK98_RS10975 39df4522725e945663d273749c56823d 80 Pfam PF01106 NifU-like domain 12 77 1.4E-26 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 RK98_RS10975 39df4522725e945663d273749c56823d 80 Gene3D G3DSA:3.30.300.130 3 80 2.4E-28 T 28-03-2018 IPR034904 Fe-S cluster assembly domain RK98_RS13785 b67d70e137d72a4bb3e475e10cd33f7c 323 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 87 321 2.6E-53 T 28-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 RK98_RS13785 b67d70e137d72a4bb3e475e10cd33f7c 323 SUPERFAMILY SSF50037 285 322 5.49E-5 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal RK98_RS13785 b67d70e137d72a4bb3e475e10cd33f7c 323 Gene3D G3DSA:2.30.30.100 278 321 4.3E-10 T 28-03-2018 RK98_RS13785 b67d70e137d72a4bb3e475e10cd33f7c 323 Pfam PF08279 HTH domain 6 57 3.4E-14 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 RK98_RS13785 b67d70e137d72a4bb3e475e10cd33f7c 323 SUPERFAMILY SSF46785 4 60 5.45E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13785 b67d70e137d72a4bb3e475e10cd33f7c 323 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 323 30.523 T 28-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 RK98_RS13785 b67d70e137d72a4bb3e475e10cd33f7c 323 Gene3D G3DSA:3.30.930.10 65 276 2.9E-59 T 28-03-2018 RK98_RS13785 b67d70e137d72a4bb3e475e10cd33f7c 323 SUPERFAMILY SSF55681 76 273 2.9E-53 T 28-03-2018 RK98_RS13785 b67d70e137d72a4bb3e475e10cd33f7c 323 Pfam PF03099 Biotin/lipoate A/B protein ligase family 91 212 1.1E-12 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RK98_RS13785 b67d70e137d72a4bb3e475e10cd33f7c 323 Gene3D G3DSA:1.10.10.10 1 64 2.2E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06900 3ee5939b6429cb88119e64252e3b3bcc 147 Pfam PF03992 Antibiotic biosynthesis monooxygenase 45 118 7.4E-15 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain RK98_RS06900 3ee5939b6429cb88119e64252e3b3bcc 147 Gene3D G3DSA:3.30.70.100 37 143 1.1E-20 T 28-03-2018 RK98_RS06900 3ee5939b6429cb88119e64252e3b3bcc 147 SUPERFAMILY SSF54909 45 123 1.07E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 SUPERFAMILY SSF54184 600 655 1.44E-13 T 28-03-2018 RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 SMART SM00740 657 713 2.6E-4 T 28-03-2018 IPR005543 PASTA domain RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 SMART SM00740 596 656 5.0E-10 T 28-03-2018 IPR005543 PASTA domain RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 SUPERFAMILY SSF56519 62 242 5.76E-44 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 Pfam PF03793 PASTA domain 659 712 1.8E-7 T 28-03-2018 IPR005543 PASTA domain RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 Pfam PF03793 PASTA domain 601 654 1.3E-8 T 28-03-2018 IPR005543 PASTA domain RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 Gene3D G3DSA:3.40.710.10 240 592 1.4E-68 T 28-03-2018 RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 579 2.7E-82 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 SUPERFAMILY SSF54184 658 712 1.44E-12 T 28-03-2018 RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 SUPERFAMILY SSF56601 195 607 1.75E-77 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 224 8.5E-23 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RK98_RS12295 4094fbd94e76e21120f7c88fe4801a37 744 Gene3D G3DSA:3.90.1310.10 27 239 1.7E-39 T 28-03-2018 RK98_RS13320 4d64985aae30ecf86211c57fcbcd1392 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 328 5.3E-88 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 RK98_RS13320 4d64985aae30ecf86211c57fcbcd1392 332 Pfam PF00591 Glycosyl transferase family, a/b domain 76 323 5.6E-79 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS13320 4d64985aae30ecf86211c57fcbcd1392 332 Gene3D G3DSA:3.40.1030.10 69 331 1.3E-82 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS13320 4d64985aae30ecf86211c57fcbcd1392 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 2 332 32.948 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 RK98_RS13320 4d64985aae30ecf86211c57fcbcd1392 332 SUPERFAMILY SSF52418 72 329 2.35E-78 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS06485 d2aa3ca100f7696814d7042aaefb5e72 165 SUPERFAMILY SSF55729 1 151 1.02E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS06485 d2aa3ca100f7696814d7042aaefb5e72 165 Pfam PF13302 Acetyltransferase (GNAT) domain 6 147 4.3E-18 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS06485 d2aa3ca100f7696814d7042aaefb5e72 165 Gene3D G3DSA:3.40.630.30 1 160 4.6E-11 T 28-03-2018 RK98_RS11505 df266b478853f321b0514ad56a9ee193 183 Pfam PF00583 Acetyltransferase (GNAT) family 56 164 9.0E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS11505 df266b478853f321b0514ad56a9ee193 183 Gene3D G3DSA:3.40.630.30 1 183 5.4E-24 T 28-03-2018 RK98_RS11505 df266b478853f321b0514ad56a9ee193 183 SUPERFAMILY SSF55729 2 177 9.07E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS06115 da4e5160ae3175ed6d51891f1b08b149 585 SUPERFAMILY SSF56601 348 582 3.27E-34 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like RK98_RS06115 da4e5160ae3175ed6d51891f1b08b149 585 Gene3D G3DSA:3.40.710.10 342 585 2.4E-27 T 28-03-2018 RK98_RS06115 da4e5160ae3175ed6d51891f1b08b149 585 Pfam PF05569 BlaR1 peptidase M56 5 301 2.0E-100 T 28-03-2018 IPR008756 Peptidase M56 RK98_RS06115 da4e5160ae3175ed6d51891f1b08b149 585 Gene3D G3DSA:3.30.2010.10 131 220 9.2E-7 T 28-03-2018 RK98_RS06115 da4e5160ae3175ed6d51891f1b08b149 585 Pfam PF00905 Penicillin binding protein transpeptidase domain 381 580 5.9E-41 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RK98_RS11560 e0ae846708e19d94390801e0ec273775 336 Pfam PF01757 Acyltransferase family 9 312 1.4E-21 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 RK98_RS13580 f52c10c83e0f3a891c337f7b7ce46fa8 204 SMART SM00014 84 195 6.5E-25 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RK98_RS13580 f52c10c83e0f3a891c337f7b7ce46fa8 204 Gene3D G3DSA:1.20.144.10 8 201 2.2E-26 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RK98_RS13580 f52c10c83e0f3a891c337f7b7ce46fa8 204 Pfam PF01569 PAP2 superfamily 84 200 1.6E-21 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RK98_RS13580 f52c10c83e0f3a891c337f7b7ce46fa8 204 SUPERFAMILY SSF48317 4 200 9.03E-38 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 PRINTS PR01034 Ribosomal protein S12 signature 123 135 3.1E-57 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 PRINTS PR01034 Ribosomal protein S12 signature 40 55 3.1E-57 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 PRINTS PR01034 Ribosomal protein S12 signature 71 90 3.1E-57 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 PRINTS PR01034 Ribosomal protein S12 signature 107 123 3.1E-57 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 PRINTS PR01034 Ribosomal protein S12 signature 55 70 3.1E-57 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 PRINTS PR01034 Ribosomal protein S12 signature 90 107 3.1E-57 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 PIRSF PIRSF002133 1 137 7.7E-48 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 39.807 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 Gene3D G3DSA:2.40.50.140 1 137 1.7E-62 T 28-03-2018 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 Pfam PF00164 Ribosomal protein S12/S23 32 136 3.8E-36 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 136 6.5E-67 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS03305 3eb38fdd48faf467ba309108f314255f 137 SUPERFAMILY SSF50249 2 136 2.91E-47 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS01150 73ef7cdd86a84d3fa6ed2191306a0781 104 Pfam PF08838 Protein of unknown function (DUF1811) 4 103 5.0E-39 T 28-03-2018 IPR014938 Protein of unknown function DUF1811 RK98_RS01150 73ef7cdd86a84d3fa6ed2191306a0781 104 Gene3D G3DSA:1.10.287.880 2 51 6.7E-21 T 28-03-2018 RK98_RS01150 73ef7cdd86a84d3fa6ed2191306a0781 104 Gene3D G3DSA:2.30.30.340 52 104 2.8E-19 T 28-03-2018 RK98_RS01150 73ef7cdd86a84d3fa6ed2191306a0781 104 SUPERFAMILY SSF101697 2 103 4.97E-41 T 28-03-2018 IPR014938 Protein of unknown function DUF1811 RK98_RS10120 2828f15685cdab48ca0d0f1c7e39bf2b 187 SMART SM00793 6 187 5.1E-90 T 28-03-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 RK98_RS10120 2828f15685cdab48ca0d0f1c7e39bf2b 187 Hamap MF_00784 Accessory gene regulator protein B [agrB]. 3 187 21.192 T 28-03-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 RK98_RS10120 2828f15685cdab48ca0d0f1c7e39bf2b 187 Pfam PF04647 Accessory gene regulator B 9 177 6.8E-32 T 28-03-2018 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 RK98_RS00265 7d0a58e29bf9eca66fb1f4e8e4c943cc 163 Gene3D G3DSA:3.90.20.10 22 155 1.8E-10 T 28-03-2018 RK98_RS00265 7d0a58e29bf9eca66fb1f4e8e4c943cc 163 SUPERFAMILY SSF58104 39 146 1.57E-5 T 28-03-2018 RK98_RS00265 7d0a58e29bf9eca66fb1f4e8e4c943cc 163 Pfam PF06103 Bacterial protein of unknown function (DUF948) 7 95 1.4E-28 T 28-03-2018 IPR009293 Uncharacterised protein family UPF0478 RK98_RS07565 560e4291c98a3e9e8f4297a2bab0f4ab 257 Pfam PF04507 Csa1 family 1 257 6.1E-126 T 28-03-2018 IPR007595 Csa1 family RK98_RS07565 560e4291c98a3e9e8f4297a2bab0f4ab 257 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 255 4.8E-103 T 28-03-2018 IPR007595 Csa1 family RK98_RS13170 47dbee0a3a51f21b138559e742978faa 95 Hamap MF_00363 UPF0154 protein . 17 87 22.221 T 28-03-2018 IPR005359 Protein with unknown function UPF0154 RK98_RS13170 47dbee0a3a51f21b138559e742978faa 95 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 16 77 4.0E-10 T 28-03-2018 IPR005359 Protein with unknown function UPF0154 RK98_RS13170 47dbee0a3a51f21b138559e742978faa 95 Pfam PF03672 Uncharacterised protein family (UPF0154) 25 84 3.2E-30 T 28-03-2018 IPR005359 Protein with unknown function UPF0154 RK98_RS13170 47dbee0a3a51f21b138559e742978faa 95 SUPERFAMILY SSF47473 50 88 9.84E-5 T 28-03-2018 IPR011992 EF-hand domain pair RK98_RS13170 47dbee0a3a51f21b138559e742978faa 95 Gene3D G3DSA:1.10.238.10 38 91 4.2E-4 T 28-03-2018 RK98_RS05460 ef34db267e1bf13a0f2615aa7c8be627 495 Gene3D G3DSA:3.40.605.10 3 271 5.3E-93 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RK98_RS05460 ef34db267e1bf13a0f2615aa7c8be627 495 SUPERFAMILY SSF53720 7 488 1.7E-165 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RK98_RS05460 ef34db267e1bf13a0f2615aa7c8be627 495 Gene3D G3DSA:3.40.309.10 272 469 9.1E-73 T 28-03-2018 RK98_RS05460 ef34db267e1bf13a0f2615aa7c8be627 495 Pfam PF00171 Aldehyde dehydrogenase family 22 483 4.0E-173 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RK98_RS05460 ef34db267e1bf13a0f2615aa7c8be627 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RK98_RS05460 ef34db267e1bf13a0f2615aa7c8be627 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 303 4.4E-115 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 SUPERFAMILY SSF53613 4 303 6.24E-81 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 Hamap MF_01987 Ribokinase [rbsK]. 3 304 26.114 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 Pfam PF00294 pfkB family carbohydrate kinase 3 296 9.9E-68 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 PRINTS PR00990 Ribokinase signature 219 230 7.3E-30 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 PRINTS PR00990 Ribokinase signature 175 190 7.3E-30 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 PRINTS PR00990 Ribokinase signature 7 28 7.3E-30 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 PRINTS PR00990 Ribokinase signature 35 54 7.3E-30 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 PRINTS PR00990 Ribokinase signature 107 120 7.3E-30 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 RK98_RS04920 764a40a3a702a4b1cd0e00b7118a74c2 304 Gene3D G3DSA:3.40.1190.20 1 304 3.8E-79 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS09205 50d3213eea881a863d2b11a3492fe903 310 Pfam PF00294 pfkB family carbohydrate kinase 8 292 1.3E-64 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB RK98_RS09205 50d3213eea881a863d2b11a3492fe903 310 Hamap MF_01557 Tagatose-6-phosphate kinase [lacC]. 1 310 60.391 T 28-03-2018 IPR005926 Tagatose-6-phosphate kinase GO:0009024|GO:0019512 KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395 RK98_RS09205 50d3213eea881a863d2b11a3492fe903 310 Gene3D G3DSA:3.40.1190.20 43 310 9.0E-44 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS09205 50d3213eea881a863d2b11a3492fe903 310 TIGRFAM TIGR01231 lacC: tagatose-6-phosphate kinase 1 310 6.2E-187 T 28-03-2018 IPR005926 Tagatose-6-phosphate kinase GO:0009024|GO:0019512 KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395 RK98_RS09205 50d3213eea881a863d2b11a3492fe903 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RK98_RS09205 50d3213eea881a863d2b11a3492fe903 310 SUPERFAMILY SSF53613 1 290 6.24E-65 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS09205 50d3213eea881a863d2b11a3492fe903 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RK98_RS09205 50d3213eea881a863d2b11a3492fe903 310 PIRSF PIRSF000535 1 310 7.7E-138 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RK98_RS09205 50d3213eea881a863d2b11a3492fe903 310 Gene3D G3DSA:2.20.150.10 9 42 1.7E-12 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain RK98_RS09205 50d3213eea881a863d2b11a3492fe903 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 307 1.7E-97 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RK98_RS14220 e8790f8c7aa3e0e7e714d772f4f686bb 174 Gene3D G3DSA:3.40.50.300 6 174 2.8E-23 T 28-03-2018 RK98_RS14220 e8790f8c7aa3e0e7e714d772f4f686bb 174 Pfam PF01202 Shikimate kinase 14 168 1.9E-42 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RK98_RS14220 e8790f8c7aa3e0e7e714d772f4f686bb 174 PRINTS PR01100 Shikimate kinase family signature 77 86 6.4E-20 T 28-03-2018 RK98_RS14220 e8790f8c7aa3e0e7e714d772f4f686bb 174 PRINTS PR01100 Shikimate kinase family signature 8 23 6.4E-20 T 28-03-2018 RK98_RS14220 e8790f8c7aa3e0e7e714d772f4f686bb 174 PRINTS PR01100 Shikimate kinase family signature 60 68 6.4E-20 T 28-03-2018 RK98_RS14220 e8790f8c7aa3e0e7e714d772f4f686bb 174 PRINTS PR01100 Shikimate kinase family signature 32 45 6.4E-20 T 28-03-2018 RK98_RS14220 e8790f8c7aa3e0e7e714d772f4f686bb 174 PRINTS PR01100 Shikimate kinase family signature 98 115 6.4E-20 T 28-03-2018 RK98_RS14220 e8790f8c7aa3e0e7e714d772f4f686bb 174 SUPERFAMILY SSF52540 8 165 5.12E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14220 e8790f8c7aa3e0e7e714d772f4f686bb 174 Hamap MF_00109 Shikimate kinase [aroK]. 5 169 23.81 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RK98_RS14220 e8790f8c7aa3e0e7e714d772f4f686bb 174 ProSitePatterns PS01128 Shikimate kinase signature. 61 85 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 109 239 5.0E-38 T 28-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 SUPERFAMILY SSF51735 1 105 6.4E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 SUPERFAMILY SSF51735 212 239 6.4E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 24 239 8.3E-50 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 PIRSF PIRSF000161 1 240 1.9E-73 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 SUPERFAMILY SSF55347 109 213 1.18E-27 T 28-03-2018 RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 240 25.597 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 130 147 - T 28-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 1 106 6.6E-15 T 28-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 Gene3D G3DSA:3.40.50.720 1 121 1.3E-18 T 28-03-2018 RK98_RS13465 b1ed07997f7e6b44a0804e78760fb48d 240 Gene3D G3DSA:3.30.360.10 122 211 4.8E-32 T 28-03-2018 RK98_RS00290 eea915ea76b74154e429dd734854e403 103 Gene3D G3DSA:3.40.30.10 1 103 1.2E-21 T 28-03-2018 RK98_RS00290 eea915ea76b74154e429dd734854e403 103 SUPERFAMILY SSF52833 3 102 2.97E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS00290 eea915ea76b74154e429dd734854e403 103 Pfam PF00085 Thioredoxin 12 93 7.0E-16 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 RK98_RS00545 d2fae2a2aa826379170dec2ddf0ffe52 331 Pfam PF11611 Domain of unknown function (DUF4352) 81 214 8.8E-36 T 28-03-2018 IPR029051 Domain of unknown function DUF4352 RK98_RS00545 d2fae2a2aa826379170dec2ddf0ffe52 331 Gene3D G3DSA:2.60.40.1240 80 239 4.6E-26 T 28-03-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain RK98_RS14995 33aec4abc44c4a48a7e913f1a01cd877 466 Gene3D G3DSA:1.10.10.630 310 385 9.1E-11 T 28-03-2018 IPR034829 DnaD-like domain RK98_RS14995 33aec4abc44c4a48a7e913f1a01cd877 466 Pfam PF07261 Replication initiation and membrane attachment 326 386 1.1E-9 T 28-03-2018 IPR006343 DnaD domain RK98_RS13375 c4b4000d16fcf3a406d4a7039dab4f36 257 SMART SM00382 29 221 1.4E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS13375 c4b4000d16fcf3a406d4a7039dab4f36 257 SUPERFAMILY SSF52540 3 244 5.97E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13375 c4b4000d16fcf3a406d4a7039dab4f36 257 Pfam PF00005 ABC transporter 21 173 7.4E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS13375 c4b4000d16fcf3a406d4a7039dab4f36 257 Gene3D G3DSA:3.40.50.300 1 255 1.5E-49 T 28-03-2018 RK98_RS05275 58b71e82c21a9b161a25f954bfa1f572 65 Pfam PF01381 Helix-turn-helix 5 59 6.9E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS05275 58b71e82c21a9b161a25f954bfa1f572 65 Gene3D G3DSA:1.10.10.10 2 25 3.6E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS05275 58b71e82c21a9b161a25f954bfa1f572 65 Gene3D G3DSA:3.30.1190.10 26 65 8.9E-13 T 28-03-2018 RK98_RS05275 58b71e82c21a9b161a25f954bfa1f572 65 SUPERFAMILY SSF47413 2 61 3.1E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS05275 58b71e82c21a9b161a25f954bfa1f572 65 SMART SM00530 4 59 1.1E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS05110 010c4e9eda4a9bc05bfa2737770fab2a 470 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 45 390 8.4E-66 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain RK98_RS05110 010c4e9eda4a9bc05bfa2737770fab2a 470 SUPERFAMILY SSF53850 33 464 4.65E-88 T 28-03-2018 RK98_RS05110 010c4e9eda4a9bc05bfa2737770fab2a 470 Gene3D G3DSA:3.10.105.10 247 440 4.5E-37 T 28-03-2018 RK98_RS05110 010c4e9eda4a9bc05bfa2737770fab2a 470 PIRSF PIRSF002741 3 469 1.9E-74 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RK98_RS05110 010c4e9eda4a9bc05bfa2737770fab2a 470 Gene3D G3DSA:3.40.190.10 122 246 1.0E-29 T 28-03-2018 RK98_RS05110 010c4e9eda4a9bc05bfa2737770fab2a 470 Gene3D G3DSA:3.90.76.10 34 121 1.7E-12 T 28-03-2018 RK98_RS14170 ba8dc1ed962293aa27ad0557f1a0757b 154 Gene3D G3DSA:2.40.50.100 75 154 1.2E-17 T 28-03-2018 RK98_RS14170 ba8dc1ed962293aa27ad0557f1a0757b 154 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 154 8.5E-51 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RK98_RS14170 ba8dc1ed962293aa27ad0557f1a0757b 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 83 96 1.1E-15 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RK98_RS14170 ba8dc1ed962293aa27ad0557f1a0757b 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 115 128 1.1E-15 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RK98_RS14170 ba8dc1ed962293aa27ad0557f1a0757b 154 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 100 114 1.1E-15 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 RK98_RS14170 ba8dc1ed962293aa27ad0557f1a0757b 154 SUPERFAMILY SSF51230 77 153 1.11E-22 T 28-03-2018 IPR011053 Single hybrid motif RK98_RS14170 ba8dc1ed962293aa27ad0557f1a0757b 154 Pfam PF00364 Biotin-requiring enzyme 79 152 9.3E-23 T 28-03-2018 IPR000089 Biotin/lipoyl attachment RK98_RS14525 4916e1a9c8d992794bd3790395344158 228 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 227 1.7E-89 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS14525 4916e1a9c8d992794bd3790395344158 228 Gene3D G3DSA:3.40.50.1580 1 228 5.5E-56 T 28-03-2018 RK98_RS14525 4916e1a9c8d992794bd3790395344158 228 Pfam PF01048 Phosphorylase superfamily 2 225 2.5E-50 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RK98_RS14525 4916e1a9c8d992794bd3790395344158 228 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 1 228 45.633 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS14525 4916e1a9c8d992794bd3790395344158 228 SUPERFAMILY SSF53167 2 227 2.88E-73 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RK98_RS14665 df2f841474895ae318994008eea3f568 60 Gene3D G3DSA:1.10.1470.10 4 60 4.1E-16 T 28-03-2018 IPR008462 CsbD-like domain RK98_RS14665 df2f841474895ae318994008eea3f568 60 Pfam PF05532 CsbD-like 4 52 4.7E-15 T 28-03-2018 IPR008462 CsbD-like domain RK98_RS14665 df2f841474895ae318994008eea3f568 60 SUPERFAMILY SSF69047 5 57 8.11E-11 T 28-03-2018 IPR008462 CsbD-like domain RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 9 23 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 SUPERFAMILY SSF51445 1 467 2.17E-159 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 Hamap MF_01574 6-phospho-beta-galactosidase [lacG]. 1 470 69.403 T 28-03-2018 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85 RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 Pfam PF00232 Glycosyl hydrolase family 1 2 468 4.2E-176 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 2.7E-24 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 2.7E-24 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 2.7E-24 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 2.7E-24 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 2.7E-24 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 Gene3D G3DSA:3.20.20.80 1 470 9.5E-146 T 28-03-2018 RK98_RS09225 089c6fd64effbabe215faa0504c2ceb3 470 TIGRFAM TIGR01233 lacG: 6-phospho-beta-galactosidase 2 469 2.4E-261 T 28-03-2018 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85 RK98_RS00665 c2b53e61772004b90fc9d02e7660af4b 262 Pfam PF08862 Domain of unknown function DUF1829 166 253 3.4E-22 T 28-03-2018 IPR014961 Domain of unknown function DUF1829 RK98_RS00665 c2b53e61772004b90fc9d02e7660af4b 262 Pfam PF08861 Domain of unknown function DUF1828 35 128 4.6E-23 T 28-03-2018 IPR014960 Domain of unknown function DUF1828 RK98_RS13180 f573dde4c3eba1d9850846ac6c56549e 155 PIRSF PIRSF021441 1 155 2.0E-68 T 28-03-2018 IPR031306 CcdC protein RK98_RS13180 f573dde4c3eba1d9850846ac6c56549e 155 Pfam PF07301 Protein of unknown function (DUF1453) 5 149 3.2E-58 T 28-03-2018 IPR009916 Protein of unknown function DUF1453 RK98_RS06930 e5fe591df9712cdef343e6c15ab19a38 445 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 244 281 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS06930 e5fe591df9712cdef343e6c15ab19a38 445 SUPERFAMILY SSF53383 21 429 3.54E-128 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS06930 e5fe591df9712cdef343e6c15ab19a38 445 PIRSF PIRSF000521 123 430 1.8E-40 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS06930 e5fe591df9712cdef343e6c15ab19a38 445 PIRSF PIRSF000521 9 130 3.2E-5 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS06930 e5fe591df9712cdef343e6c15ab19a38 445 Gene3D G3DSA:3.90.1150.10 312 441 2.2E-36 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS06930 e5fe591df9712cdef343e6c15ab19a38 445 Gene3D G3DSA:3.40.640.10 60 311 4.3E-72 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS06930 e5fe591df9712cdef343e6c15ab19a38 445 Pfam PF00202 Aminotransferase class-III 25 427 6.6E-105 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Gene3D G3DSA:3.40.50.140 4 131 1.4E-39 T 28-03-2018 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 SMART SM00436 106 194 3.5E-53 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 657 690 0.18 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 576 613 4.8E-16 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 655 1.0E-14 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Gene3D G3DSA:3.30.65.10 613 652 2.4E-10 T 28-03-2018 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Gene3D G3DSA:3.30.65.10 653 691 0.0029 T 28-03-2018 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Gene3D G3DSA:3.30.65.10 556 612 1.5E-17 T 28-03-2018 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Gene3D G3DSA:2.70.20.10 328 456 2.8E-39 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Pfam PF01131 DNA topoisomerase 130 548 5.9E-134 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 1.4E-35 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 164 182 1.4E-35 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 1.4E-35 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 295 304 1.4E-35 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 79 92 1.4E-35 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Hamap MF_00952 DNA topoisomerase 1 [topA]. 5 633 56.16 T 28-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 SMART SM00437 244 510 1.3E-115 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Gene3D G3DSA:1.10.460.10 137 327 2.1E-49 T 28-03-2018 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 SUPERFAMILY SSF56712 6 589 3.01E-199 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 281 304 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 7 611 2.0E-259 T 28-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 Pfam PF01751 Toprim domain 7 115 3.9E-30 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS12650 e4d09c3d587585be9e99bab36e07a25e 691 SMART SM00493 5 105 5.2E-33 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS05225 09b128c3db362cce5b8932de05f21eec 423 SUPERFAMILY SSF53850 41 406 8.89E-80 T 28-03-2018 RK98_RS05225 09b128c3db362cce5b8932de05f21eec 423 PRINTS PR00181 Maltose binding protein signature 145 164 1.6E-7 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 RK98_RS05225 09b128c3db362cce5b8932de05f21eec 423 PRINTS PR00181 Maltose binding protein signature 49 67 1.6E-7 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 RK98_RS05225 09b128c3db362cce5b8932de05f21eec 423 PRINTS PR00181 Maltose binding protein signature 370 389 1.6E-7 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 RK98_RS05225 09b128c3db362cce5b8932de05f21eec 423 PRINTS PR00181 Maltose binding protein signature 188 207 1.6E-7 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 RK98_RS05225 09b128c3db362cce5b8932de05f21eec 423 Gene3D G3DSA:3.40.190.10 213 370 2.4E-12 T 28-03-2018 RK98_RS05225 09b128c3db362cce5b8932de05f21eec 423 Gene3D G3DSA:3.40.190.10 27 196 2.3E-29 T 28-03-2018 RK98_RS05225 09b128c3db362cce5b8932de05f21eec 423 Pfam PF13416 Bacterial extracellular solute-binding protein 61 351 2.5E-40 T 28-03-2018 RK98_RS03245 8f7a35e327a3eb3d8df2ff6eac90a0be 205 Gene3D G3DSA:3.40.50.300 2 201 2.1E-35 T 28-03-2018 RK98_RS03245 8f7a35e327a3eb3d8df2ff6eac90a0be 205 Pfam PF01712 Deoxynucleoside kinase 6 193 5.5E-46 T 28-03-2018 IPR031314 Deoxynucleoside kinase domain RK98_RS03245 8f7a35e327a3eb3d8df2ff6eac90a0be 205 PIRSF PIRSF000705 1 205 9.0E-60 T 28-03-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 RK98_RS03245 8f7a35e327a3eb3d8df2ff6eac90a0be 205 SUPERFAMILY SSF52540 1 199 2.36E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13215 bd0184a81f94ff42be087a083ca3c313 155 PIRSF PIRSF003230 3 139 1.6E-30 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RK98_RS13215 bd0184a81f94ff42be087a083ca3c313 155 Pfam PF03061 Thioesterase superfamily 18 102 5.2E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 RK98_RS13215 bd0184a81f94ff42be087a083ca3c313 155 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 122 1.4E-29 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 RK98_RS13215 bd0184a81f94ff42be087a083ca3c313 155 SUPERFAMILY SSF54637 3 133 4.59E-37 T 28-03-2018 IPR029069 HotDog domain RK98_RS13215 bd0184a81f94ff42be087a083ca3c313 155 Gene3D G3DSA:3.10.129.10 3 143 1.7E-35 T 28-03-2018 RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.352 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 28-03-2018 IPR018215 ClpP, Ser active site RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 Gene3D G3DSA:3.90.226.10 2 193 2.2E-46 T 28-03-2018 RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 28-03-2018 IPR033135 ClpP, histidine active site RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 9.1E-105 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 4.7E-55 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 4.7E-55 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 4.7E-55 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 4.7E-55 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 4.7E-55 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 Pfam PF00574 Clp protease 13 191 1.8E-89 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA RK98_RS02105 92ec658791ede59b4a85d2489a425805 195 SUPERFAMILY SSF52096 11 190 4.59E-75 T 28-03-2018 IPR029045 ClpP/crotonase-like domain RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 797 0.0 T 28-03-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 Pfam PF13244 Domain of unknown function (DUF4040) 630 694 9.1E-21 T 28-03-2018 IPR025383 Domain of unknown function DUF4040 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 Pfam PF00361 Proton-conducting membrane transporter 128 424 9.2E-63 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 115 2.1E-11 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 258 280 2.2E-6 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 529 550 2.2E-6 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 366 388 2.2E-6 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 2.2E-6 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 3.2E-41 T 28-03-2018 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 3.2E-41 T 28-03-2018 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 3.2E-41 T 28-03-2018 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 3.2E-41 T 28-03-2018 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 435 454 3.2E-41 T 28-03-2018 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 3.2E-41 T 28-03-2018 RK98_RS11055 c5f73b6b43a7d7569c6552847db1ba0d 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 3.2E-41 T 28-03-2018 RK98_RS08435 7338538bc8f877a9b6c669b8efa266e4 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 107 20.827 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 RK98_RS08435 7338538bc8f877a9b6c669b8efa266e4 108 SUPERFAMILY SSF103481 7 107 1.27E-10 T 28-03-2018 RK98_RS08435 7338538bc8f877a9b6c669b8efa266e4 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 1.3E-40 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 RK98_RS07575 37fdfdc0c9db5504043e4561cf2a2956 264 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 255 3.3E-101 T 28-03-2018 IPR007595 Csa1 family RK98_RS07575 37fdfdc0c9db5504043e4561cf2a2956 264 Pfam PF04507 Csa1 family 1 257 3.5E-126 T 28-03-2018 IPR007595 Csa1 family RK98_RS11225 9bf7a58d3021fef75ee5d68c2745f052 356 Gene3D G3DSA:1.10.3720.10 63 356 1.2E-44 T 28-03-2018 RK98_RS11225 9bf7a58d3021fef75ee5d68c2745f052 356 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 50 101 1.2E-16 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RK98_RS11225 9bf7a58d3021fef75ee5d68c2745f052 356 SUPERFAMILY SSF161098 147 341 1.44E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS11225 9bf7a58d3021fef75ee5d68c2745f052 356 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 172 356 1.3E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS08075 b52b8fbc27208540d2be45a313d41ad3 155 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 18 155 1.5E-22 T 28-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 RK98_RS08075 b52b8fbc27208540d2be45a313d41ad3 155 SUPERFAMILY SSF55961 4 154 7.54E-33 T 28-03-2018 RK98_RS08075 b52b8fbc27208540d2be45a313d41ad3 155 Gene3D G3DSA:3.30.530.20 1 155 1.5E-18 T 28-03-2018 IPR023393 START-like domain RK98_RS11865 4c265995cda5572bb7b141856391af75 63 Pfam PF17259 Family of unknown function (DUF5325) 4 63 2.3E-20 T 28-03-2018 IPR035211 Protein of unknown function DUF5325 RK98_RS11865 4c265995cda5572bb7b141856391af75 63 Gene3D G3DSA:1.20.1250.20 2 54 9.9E-4 T 28-03-2018 RK98_RS03880 d490931360f274177b58f766c2e4e89f 224 SMART SM00014 99 210 1.7E-11 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RK98_RS03880 d490931360f274177b58f766c2e4e89f 224 SUPERFAMILY SSF48317 13 220 1.57E-26 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RK98_RS03880 d490931360f274177b58f766c2e4e89f 224 Gene3D G3DSA:1.20.144.10 16 223 1.7E-18 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RK98_RS03880 d490931360f274177b58f766c2e4e89f 224 Pfam PF01569 PAP2 superfamily 99 214 3.4E-13 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase RK98_RS07335 ca4cbd2bd0cbd3ea33092354eccb9c7e 163 Pfam PF13420 Acetyltransferase (GNAT) domain 2 153 2.4E-22 T 28-03-2018 RK98_RS07335 ca4cbd2bd0cbd3ea33092354eccb9c7e 163 Gene3D G3DSA:3.40.630.30 86 162 9.0E-16 T 28-03-2018 RK98_RS07335 ca4cbd2bd0cbd3ea33092354eccb9c7e 163 Gene3D G3DSA:3.40.630.30 1 85 7.9E-16 T 28-03-2018 RK98_RS07335 ca4cbd2bd0cbd3ea33092354eccb9c7e 163 SUPERFAMILY SSF55729 1 162 1.11E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS05185 81902b5f131579c9d835c9d5d12145bd 252 SUPERFAMILY SSF52172 1 126 2.7E-29 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS05185 81902b5f131579c9d835c9d5d12145bd 252 SMART SM00342 166 248 4.4E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS05185 81902b5f131579c9d835c9d5d12145bd 252 Pfam PF12833 Helix-turn-helix domain 173 249 2.6E-15 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS05185 81902b5f131579c9d835c9d5d12145bd 252 Gene3D G3DSA:1.10.10.60 144 199 4.1E-11 T 28-03-2018 RK98_RS05185 81902b5f131579c9d835c9d5d12145bd 252 Gene3D G3DSA:1.10.10.60 200 252 1.1E-9 T 28-03-2018 RK98_RS05185 81902b5f131579c9d835c9d5d12145bd 252 SUPERFAMILY SSF46689 148 200 1.08E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS05185 81902b5f131579c9d835c9d5d12145bd 252 Pfam PF00072 Response regulator receiver domain 4 111 5.5E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS05185 81902b5f131579c9d835c9d5d12145bd 252 SMART SM00448 2 114 1.1E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS05185 81902b5f131579c9d835c9d5d12145bd 252 Gene3D G3DSA:3.40.50.2300 1 137 3.9E-28 T 28-03-2018 RK98_RS05185 81902b5f131579c9d835c9d5d12145bd 252 SUPERFAMILY SSF46689 203 250 6.72E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS05065 81d9b5ad13196df2c22840f4f4e704e9 311 SUPERFAMILY SSF53590 2 308 4.19E-96 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RK98_RS05065 81d9b5ad13196df2c22840f4f4e704e9 311 Gene3D G3DSA:3.90.245.10 1 311 5.2E-104 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RK98_RS05065 81d9b5ad13196df2c22840f4f4e704e9 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 28-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 RK98_RS05065 81d9b5ad13196df2c22840f4f4e704e9 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 301 4.3E-86 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain RK98_RS10560 57005800f62c743e2e4542b5da6ee189 100 Pfam PF10655 Hypothetical protein of unknown function (DUF2482) 4 89 2.2E-7 T 28-03-2018 IPR018917 Protein of unknown function DUF2482 RK98_RS13060 20c7dca13dccb2720258dd5a3c6e9d24 62 Gene3D G3DSA:1.10.3470.10 4 62 5.4E-4 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS08610 680a32aff24dba16acd9e7dc4ca7cde8 317 SUPERFAMILY SSF52283 3 133 5.86E-33 T 28-03-2018 RK98_RS08610 680a32aff24dba16acd9e7dc4ca7cde8 317 SUPERFAMILY SSF51735 99 285 6.35E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS08610 680a32aff24dba16acd9e7dc4ca7cde8 317 Gene3D G3DSA:3.40.50.720 1 112 1.5E-31 T 28-03-2018 RK98_RS08610 680a32aff24dba16acd9e7dc4ca7cde8 317 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 317 6.6E-33 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RK98_RS08610 680a32aff24dba16acd9e7dc4ca7cde8 317 Gene3D G3DSA:3.40.50.720 113 288 2.0E-53 T 28-03-2018 RK98_RS08610 680a32aff24dba16acd9e7dc4ca7cde8 317 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 285 6.8E-60 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RK98_RS02120 cbe7c2f48b9dba3e7efa9e3eea16c1e7 331 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 6 314 1.7E-132 T 28-03-2018 IPR010119 Gluconeogenesis factor RK98_RS02120 cbe7c2f48b9dba3e7efa9e3eea16c1e7 331 SUPERFAMILY SSF142338 3 312 4.58E-100 T 28-03-2018 RK98_RS02120 cbe7c2f48b9dba3e7efa9e3eea16c1e7 331 Pfam PF01933 Uncharacterised protein family UPF0052 6 286 1.2E-104 T 28-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 RK98_RS02120 cbe7c2f48b9dba3e7efa9e3eea16c1e7 331 Hamap MF_00973 Gluconeogenesis factor. 2 317 34.007 T 28-03-2018 IPR010119 Gluconeogenesis factor RK98_RS02120 cbe7c2f48b9dba3e7efa9e3eea16c1e7 331 Gene3D G3DSA:3.40.50.10680 82 313 4.7E-60 T 28-03-2018 RK98_RS08955 31a6c1c28a48bae78c4948ccf4b92546 69 Pfam PF00831 Ribosomal L29 protein 4 60 2.8E-24 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08955 31a6c1c28a48bae78c4948ccf4b92546 69 Gene3D G3DSA:1.10.287.310 1 65 1.5E-24 T 28-03-2018 RK98_RS08955 31a6c1c28a48bae78c4948ccf4b92546 69 SUPERFAMILY SSF46561 1 63 7.72E-23 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08955 31a6c1c28a48bae78c4948ccf4b92546 69 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.6E-22 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08955 31a6c1c28a48bae78c4948ccf4b92546 69 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.564 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 3.2E-57 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 PIRSF PIRSF002158 3 277 1.8E-101 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 Gene3D G3DSA:2.30.30.30 119 195 3.2E-35 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 SMART SM01383 42 118 6.7E-46 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 28-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 Gene3D G3DSA:2.40.50.140 1 114 1.5E-49 T 28-03-2018 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 49.292 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 Gene3D G3DSA:4.10.950.10 197 275 3.5E-32 T 28-03-2018 IPR014726 Ribosomal protein L2, domain 3 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 SUPERFAMILY SSF50104 126 272 1.26E-60 T 28-03-2018 IPR008991 Translation protein SH3-like domain RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 SMART SM01382 124 253 1.3E-94 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 SUPERFAMILY SSF50249 2 125 1.1E-50 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 276 5.5E-139 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 RK98_RS08930 0d185a6385d1c5f99047f77f1d3eca46 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.5E-34 T 28-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12010 0b85d0d61e71f46213effef28fc9bcfd 107 Gene3D G3DSA:3.30.70.100 3 107 7.4E-17 T 28-03-2018 RK98_RS12010 0b85d0d61e71f46213effef28fc9bcfd 107 SUPERFAMILY SSF54909 1 104 3.59E-23 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel RK98_RS12010 0b85d0d61e71f46213effef28fc9bcfd 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 4 78 3.0E-14 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain RK98_RS12010 0b85d0d61e71f46213effef28fc9bcfd 107 Hamap MF_01272 Heme oxygenase (staphylobilin-producing) [isdG]. 2 107 28.045 T 28-03-2018 IPR023953 Heme oxygenase IsdG GO:0004392|GO:0033212|GO:0055114 RK98_RS05170 dac17845fe86ba10d6e7f6a136036446 749 Pfam PF02901 Pyruvate formate lyase-like 26 608 1.8E-208 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 RK98_RS05170 dac17845fe86ba10d6e7f6a136036446 749 ProSitePatterns PS00850 Glycine radical domain signature. 719 727 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RK98_RS05170 dac17845fe86ba10d6e7f6a136036446 749 Pfam PF01228 Glycine radical 624 730 3.1E-43 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 RK98_RS05170 dac17845fe86ba10d6e7f6a136036446 749 SUPERFAMILY SSF51998 5 749 1.1E-289 T 28-03-2018 RK98_RS05170 dac17845fe86ba10d6e7f6a136036446 749 PIRSF PIRSF000379 8 749 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RK98_RS05170 dac17845fe86ba10d6e7f6a136036446 749 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 749 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 RK98_RS05170 dac17845fe86ba10d6e7f6a136036446 749 Gene3D G3DSA:3.20.70.20 2 749 2.4E-297 T 28-03-2018 RK98_RS05595 c6d64d67fd277a2a641003b9292f8d03 271 SUPERFAMILY SSF161098 75 261 3.53E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS05595 c6d64d67fd277a2a641003b9292f8d03 271 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 18 271 2.5E-80 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 RK98_RS05595 c6d64d67fd277a2a641003b9292f8d03 271 Gene3D G3DSA:1.10.3720.10 19 271 1.3E-27 T 28-03-2018 RK98_RS05595 c6d64d67fd277a2a641003b9292f8d03 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 268 2.8E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS03345 7ab5c54cafcabd9b9a9e39fa23145bff 230 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 1.1E-54 T 28-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein RK98_RS03345 7ab5c54cafcabd9b9a9e39fa23145bff 230 SUPERFAMILY SSF56808 6 225 8.24E-87 T 28-03-2018 IPR023674 Ribosomal protein L1-like RK98_RS03345 7ab5c54cafcabd9b9a9e39fa23145bff 230 Gene3D G3DSA:3.30.190.20 149 228 2.5E-21 T 28-03-2018 RK98_RS03345 7ab5c54cafcabd9b9a9e39fa23145bff 230 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 2.0E-106 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RK98_RS03345 7ab5c54cafcabd9b9a9e39fa23145bff 230 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 44.383 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 RK98_RS03345 7ab5c54cafcabd9b9a9e39fa23145bff 230 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 28-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS03345 7ab5c54cafcabd9b9a9e39fa23145bff 230 PIRSF PIRSF002155 1 227 5.7E-84 T 28-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS03345 7ab5c54cafcabd9b9a9e39fa23145bff 230 Gene3D G3DSA:3.40.50.790 68 148 6.0E-38 T 28-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich RK98_RS01395 ac47be1f688bb5be235e2132464e02f5 358 SUPERFAMILY SSF56512 2 352 5.63E-159 T 28-03-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 RK98_RS01395 ac47be1f688bb5be235e2132464e02f5 358 Gene3D G3DSA:3.90.1230.10 181 291 3.3E-49 T 28-03-2018 RK98_RS01395 ac47be1f688bb5be235e2132464e02f5 358 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 61 68 - T 28-03-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 RK98_RS01395 ac47be1f688bb5be235e2132464e02f5 358 Pfam PF02898 Nitric oxide synthase, oxygenase domain 2 348 5.7E-152 T 28-03-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 RK98_RS01395 ac47be1f688bb5be235e2132464e02f5 358 Gene3D G3DSA:3.90.340.10 1 116 3.9E-40 T 28-03-2018 RK98_RS01395 ac47be1f688bb5be235e2132464e02f5 358 PIRSF PIRSF037219 1 357 4.3E-152 T 28-03-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.13.165|KEGG: 00330+1.14.13.165 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 28-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 SUPERFAMILY SSF55174 3 200 3.27E-67 T 28-03-2018 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 1.1E-81 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 Gene3D G3DSA:3.10.290.10 98 140 6.4E-18 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 SMART SM01390 3 91 3.8E-42 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 Pfam PF01479 S4 domain 93 139 1.7E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 Gene3D G3DSA:1.10.1050.10 1 97 6.9E-37 T 28-03-2018 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 SMART SM00363 92 156 4.1E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 35.052 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 90 4.6E-26 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 RK98_RS00135 912d03cd165d6ceb35d19cba2541214e 200 Gene3D G3DSA:1.10.1050.10 141 200 6.4E-18 T 28-03-2018 RK98_RS03950 1cd1885f104e83e15b5790efa6a87a4b 270 Pfam PF04507 Csa1 family 1 263 1.3E-111 T 28-03-2018 IPR007595 Csa1 family RK98_RS03950 1cd1885f104e83e15b5790efa6a87a4b 270 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 262 3.1E-120 T 28-03-2018 IPR007595 Csa1 family RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 Gene3D G3DSA:3.30.1360.120 5 136 1.2E-35 T 28-03-2018 RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 357 1.5E-24 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 Gene3D G3DSA:4.10.1250.10 236 279 5.4E-11 T 28-03-2018 RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 Gene3D G3DSA:3.30.1360.120 137 235 4.6E-27 T 28-03-2018 RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 257 4.1E-95 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 SUPERFAMILY SSF103025 4 281 5.02E-95 T 28-03-2018 RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 Gene3D G3DSA:2.40.30.110 280 357 6.5E-21 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 PIRSF PIRSF006487 1 363 1.2E-99 T 28-03-2018 RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 5 359 3.6E-133 T 28-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 SUPERFAMILY SSF101790 273 359 1.47E-22 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain RK98_RS14215 a0577ba98a6ef4b772bb5657d0fdab18 363 Hamap MF_00259 Aminomethyltransferase [gcvT]. 4 363 47.258 T 28-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 RK98_RS09685 f67a9b28556d32703660b28788b75d2c 70 Pfam PF00137 ATP synthase subunit C 4 66 7.7E-15 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RK98_RS09685 f67a9b28556d32703660b28788b75d2c 70 Gene3D G3DSA:1.20.20.10 1 69 1.4E-20 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RK98_RS09685 f67a9b28556d32703660b28788b75d2c 70 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 15.869 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09685 f67a9b28556d32703660b28788b75d2c 70 SUPERFAMILY SSF81333 3 67 1.83E-19 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 RK98_RS09685 f67a9b28556d32703660b28788b75d2c 70 PRINTS PR00124 ATP synthase C subunit signature 43 68 2.4E-19 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09685 f67a9b28556d32703660b28788b75d2c 70 PRINTS PR00124 ATP synthase C subunit signature 5 24 2.4E-19 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09685 f67a9b28556d32703660b28788b75d2c 70 PRINTS PR00124 ATP synthase C subunit signature 26 41 2.4E-19 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09685 f67a9b28556d32703660b28788b75d2c 70 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 28-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09685 f67a9b28556d32703660b28788b75d2c 70 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 14 68 2.2E-21 T 28-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 RK98_RS10130 24aeeaadfc89ac100a693b90215b6114 261 Pfam PF00795 Carbon-nitrogen hydrolase 5 246 2.7E-44 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RK98_RS10130 24aeeaadfc89ac100a693b90215b6114 261 SUPERFAMILY SSF56317 1 260 4.58E-63 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RK98_RS10130 24aeeaadfc89ac100a693b90215b6114 261 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 142 162 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site RK98_RS10130 24aeeaadfc89ac100a693b90215b6114 261 Gene3D G3DSA:3.60.110.10 1 261 4.4E-71 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 RK98_RS02490 d62b25d412ac27b1ffc0e83d101ae256 393 PIRSF PIRSF038994 2 392 1.5E-129 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 RK98_RS02490 d62b25d412ac27b1ffc0e83d101ae256 393 SUPERFAMILY SSF51338 3 63 3.11E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS02490 d62b25d412ac27b1ffc0e83d101ae256 393 SUPERFAMILY SSF51338 361 389 3.11E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS02490 d62b25d412ac27b1ffc0e83d101ae256 393 Gene3D G3DSA:2.30.40.10 3 72 1.0E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS02490 d62b25d412ac27b1ffc0e83d101ae256 393 Gene3D G3DSA:3.20.20.140 73 361 2.5E-104 T 28-03-2018 RK98_RS02490 d62b25d412ac27b1ffc0e83d101ae256 393 Pfam PF01979 Amidohydrolase family 60 389 3.7E-27 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 RK98_RS02490 d62b25d412ac27b1ffc0e83d101ae256 393 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 388 2.8E-113 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 RK98_RS02490 d62b25d412ac27b1ffc0e83d101ae256 393 SUPERFAMILY SSF51556 63 361 1.2E-95 T 28-03-2018 IPR032466 Metal-dependent hydrolase RK98_RS06535 9445b48f742de28cc8c0c2dc1a49fde1 210 SUPERFAMILY SSF101386 108 195 2.43E-21 T 28-03-2018 RK98_RS06535 9445b48f742de28cc8c0c2dc1a49fde1 210 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 107 194 1.6E-13 T 28-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 RK98_RS06535 9445b48f742de28cc8c0c2dc1a49fde1 210 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 104 190 16.785 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 RK98_RS06535 9445b48f742de28cc8c0c2dc1a49fde1 210 SUPERFAMILY SSF141734 8 109 3.4E-45 T 28-03-2018 RK98_RS06535 9445b48f742de28cc8c0c2dc1a49fde1 210 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 108 190 1.6E-26 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 RK98_RS06535 9445b48f742de28cc8c0c2dc1a49fde1 210 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 1 104 28.202 T 28-03-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RK98_RS06535 9445b48f742de28cc8c0c2dc1a49fde1 210 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 27 100 2.3E-33 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RK98_RS06535 9445b48f742de28cc8c0c2dc1a49fde1 210 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 50 103 8.0E-27 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 RK98_RS06535 9445b48f742de28cc8c0c2dc1a49fde1 210 Gene3D G3DSA:1.10.287.1080 105 197 1.2E-18 T 28-03-2018 RK98_RS06535 9445b48f742de28cc8c0c2dc1a49fde1 210 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 4 195 34.11 T 28-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 SUPERFAMILY SSF117074 891 984 1.11E-23 T 28-03-2018 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Pfam PF00746 LPXTG cell wall anchor motif 1341 1385 1.3E-10 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Gene3D G3DSA:2.60.40.1280 240 394 5.5E-32 T 28-03-2018 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Gene3D G3DSA:2.60.40.10 902 1012 1.8E-27 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Gene3D G3DSA:2.60.40.10 682 792 4.9E-30 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Gene3D G3DSA:2.60.40.10 793 901 4.6E-27 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Gene3D G3DSA:2.60.40.10 568 681 1.5E-22 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Gene3D G3DSA:2.60.40.10 1013 1133 1.0E-23 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Gene3D G3DSA:2.60.40.1290 395 555 8.5E-41 T 28-03-2018 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 SUPERFAMILY SSF49401 245 393 1.57E-26 T 28-03-2018 IPR008966 Adhesion domain RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 13 54 1.7E-13 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Pfam PF17210 SdrD B-like domain 571 676 1.7E-25 T 28-03-2018 IPR033764 SD-repeat containing protein, B domain RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Pfam PF17210 SdrD B-like domain 794 898 1.0E-32 T 28-03-2018 IPR033764 SD-repeat containing protein, B domain RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Pfam PF17210 SdrD B-like domain 904 1007 1.6E-33 T 28-03-2018 IPR033764 SD-repeat containing protein, B domain RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Pfam PF17210 SdrD B-like domain 683 786 7.6E-34 T 28-03-2018 IPR033764 SD-repeat containing protein, B domain RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Pfam PF17210 SdrD B-like domain 1015 1117 5.9E-27 T 28-03-2018 IPR033764 SD-repeat containing protein, B domain RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 406 559 6.4E-33 T 28-03-2018 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 SUPERFAMILY SSF49401 396 591 1.14E-39 T 28-03-2018 IPR008966 Adhesion domain RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 Pfam PF04650 YSIRK type signal peptide 18 43 1.4E-11 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 SUPERFAMILY SSF117074 775 883 1.44E-23 T 28-03-2018 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 SUPERFAMILY SSF117074 569 646 3.14E-19 T 28-03-2018 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 SUPERFAMILY SSF117074 664 759 8.11E-25 T 28-03-2018 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 SUPERFAMILY SSF117074 992 1094 2.62E-22 T 28-03-2018 RK98_RS03215 62d4b16381c8d44b457b2bb4e8143c85 1385 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1348 1382 5.2E-4 T 28-03-2018 RK98_RS04795 3f1b3590eb2eb37553f59614c3fd8def 163 Gene3D G3DSA:3.30.500.20 4 116 5.9E-38 T 28-03-2018 RK98_RS04795 3f1b3590eb2eb37553f59614c3fd8def 163 Pfam PF04634 Protein of unknown function, DUF600 7 151 5.3E-52 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04795 3f1b3590eb2eb37553f59614c3fd8def 163 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 157 4.3E-79 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04795 3f1b3590eb2eb37553f59614c3fd8def 163 SUPERFAMILY SSF160424 3 162 3.27E-61 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS14925 e03e1ff37dca48555f9f54ec9535ba36 196 Gene3D G3DSA:3.40.50.300 6 72 4.3E-14 T 28-03-2018 RK98_RS14925 e03e1ff37dca48555f9f54ec9535ba36 196 Pfam PF01926 50S ribosome-binding GTPase 27 145 7.0E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS14925 e03e1ff37dca48555f9f54ec9535ba36 196 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 9 191 8.6E-68 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 RK98_RS14925 e03e1ff37dca48555f9f54ec9535ba36 196 SUPERFAMILY SSF52540 5 194 3.52E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14925 e03e1ff37dca48555f9f54ec9535ba36 196 Gene3D G3DSA:3.40.50.300 73 192 6.5E-14 T 28-03-2018 RK98_RS14925 e03e1ff37dca48555f9f54ec9535ba36 196 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 195 27.252 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 RK98_RS14140 56b03405d40e23ab24bc9a85b52e8cc1 293 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site RK98_RS14140 56b03405d40e23ab24bc9a85b52e8cc1 293 SUPERFAMILY SSF48576 6 285 7.38E-84 T 28-03-2018 IPR008949 Isoprenoid synthase domain RK98_RS14140 56b03405d40e23ab24bc9a85b52e8cc1 293 Gene3D G3DSA:1.10.600.10 4 293 3.3E-75 T 28-03-2018 IPR008949 Isoprenoid synthase domain RK98_RS14140 56b03405d40e23ab24bc9a85b52e8cc1 293 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 210 222 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site RK98_RS14140 56b03405d40e23ab24bc9a85b52e8cc1 293 Pfam PF00348 Polyprenyl synthetase 29 250 9.1E-56 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 RK98_RS08795 94f7c9440ffeb27b6f26a6f73671d307 199 Pfam PF12804 MobA-like NTP transferase domain 3 154 8.3E-26 T 28-03-2018 IPR025877 MobA-like NTP transferase RK98_RS08795 94f7c9440ffeb27b6f26a6f73671d307 199 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 195 19.583 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 RK98_RS08795 94f7c9440ffeb27b6f26a6f73671d307 199 Gene3D G3DSA:3.90.550.10 1 198 3.4E-25 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS08795 94f7c9440ffeb27b6f26a6f73671d307 199 SUPERFAMILY SSF53448 1 193 3.83E-24 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS02270 caf6d76a666e845a6a368273d5dc8af9 172 Pfam PF04229 GrpB protein 15 169 5.8E-21 T 28-03-2018 IPR007344 GrpB/Dephospho-CoA kinase RK98_RS02270 caf6d76a666e845a6a368273d5dc8af9 172 SUPERFAMILY SSF81301 13 171 3.6E-30 T 28-03-2018 RK98_RS02270 caf6d76a666e845a6a368273d5dc8af9 172 Gene3D G3DSA:3.30.460.10 4 172 5.0E-19 T 28-03-2018 RK98_RS10810 0c64f1609a416bd7e4a755986eb0b3ff 632 Pfam PF05257 CHAP domain 34 120 5.7E-7 T 28-03-2018 IPR007921 CHAP domain RK98_RS10810 0c64f1609a416bd7e4a755986eb0b3ff 632 Gene3D G3DSA:1.10.530.10 477 621 1.2E-24 T 28-03-2018 RK98_RS10810 0c64f1609a416bd7e4a755986eb0b3ff 632 SMART SM00047 481 627 5.5E-52 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RK98_RS10810 0c64f1609a416bd7e4a755986eb0b3ff 632 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 494 616 1.2E-13 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RK98_RS10810 0c64f1609a416bd7e4a755986eb0b3ff 632 SUPERFAMILY SSF54001 33 157 8.93E-8 T 28-03-2018 RK98_RS07705 31026ca87ac2c9052515fe5e67631e03 249 SMART SM00382 34 220 3.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS07705 31026ca87ac2c9052515fe5e67631e03 249 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS07705 31026ca87ac2c9052515fe5e67631e03 249 Pfam PF00005 ABC transporter 26 171 7.5E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS07705 31026ca87ac2c9052515fe5e67631e03 249 SUPERFAMILY SSF52540 1 234 8.11E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07705 31026ca87ac2c9052515fe5e67631e03 249 Gene3D G3DSA:3.40.50.300 1 248 1.3E-59 T 28-03-2018 RK98_RS11565 99bcc2acdf273e9c6c460776cc7ca4b2 139 SMART SM00347 22 122 7.5E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS11565 99bcc2acdf273e9c6c460776cc7ca4b2 139 SUPERFAMILY SSF46785 5 135 1.57E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS11565 99bcc2acdf273e9c6c460776cc7ca4b2 139 Pfam PF01047 MarR family 29 87 3.0E-14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS11565 99bcc2acdf273e9c6c460776cc7ca4b2 139 Gene3D G3DSA:1.10.10.10 1 138 4.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS11565 99bcc2acdf273e9c6c460776cc7ca4b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 2.4E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS11565 99bcc2acdf273e9c6c460776cc7ca4b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 2.4E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS11565 99bcc2acdf273e9c6c460776cc7ca4b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 2.4E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS11565 99bcc2acdf273e9c6c460776cc7ca4b2 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 2.4E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS13525 3660ddfb39ca3f46767b29359562b1ae 447 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 9 421 7.2E-157 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 RK98_RS13525 3660ddfb39ca3f46767b29359562b1ae 447 Pfam PF05525 Branched-chain amino acid transport protein 2 433 2.8E-136 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 RK98_RS09655 1990ee377726ceb7265c5772fa504795 174 Gene3D G3DSA:3.40.50.10360 1 174 2.7E-73 T 28-03-2018 IPR006340 Protein of unknown function DUF436 RK98_RS09655 1990ee377726ceb7265c5772fa504795 174 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 20 173 2.0E-85 T 28-03-2018 IPR006340 Protein of unknown function DUF436 RK98_RS09655 1990ee377726ceb7265c5772fa504795 174 SUPERFAMILY SSF110710 2 174 7.59E-74 T 28-03-2018 RK98_RS09655 1990ee377726ceb7265c5772fa504795 174 PIRSF PIRSF007510 1 174 8.0E-84 T 28-03-2018 IPR006340 Protein of unknown function DUF436 RK98_RS09655 1990ee377726ceb7265c5772fa504795 174 Hamap MF_00800 UPF0340 protein . 1 174 87.951 T 28-03-2018 IPR006340 Protein of unknown function DUF436 RK98_RS09655 1990ee377726ceb7265c5772fa504795 174 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 2 173 6.2E-92 T 28-03-2018 IPR006340 Protein of unknown function DUF436 RK98_RS09655 1990ee377726ceb7265c5772fa504795 174 Pfam PF04260 Protein of unknown function (DUF436) 5 173 1.3E-71 T 28-03-2018 IPR006340 Protein of unknown function DUF436 RK98_RS00065 2bf82da980882482c40072b3d9604454 351 SUPERFAMILY SSF53092 2 128 3.01E-24 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal RK98_RS00065 2bf82da980882482c40072b3d9604454 351 SUPERFAMILY SSF55920 130 350 1.27E-77 T 28-03-2018 IPR000994 Peptidase M24 RK98_RS00065 2bf82da980882482c40072b3d9604454 351 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 286 298 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site RK98_RS00065 2bf82da980882482c40072b3d9604454 351 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 130 8.6E-22 T 28-03-2018 IPR000587 Creatinase, N-terminal GO:0016787 RK98_RS00065 2bf82da980882482c40072b3d9604454 351 Pfam PF00557 Metallopeptidase family M24 138 339 1.8E-65 T 28-03-2018 IPR000994 Peptidase M24 RK98_RS00065 2bf82da980882482c40072b3d9604454 351 Gene3D G3DSA:3.90.230.10 114 351 1.6E-77 T 28-03-2018 RK98_RS00065 2bf82da980882482c40072b3d9604454 351 Gene3D G3DSA:3.40.350.10 1 113 5.1E-16 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal RK98_RS03075 34785b376fed0b92d98a010829c98f18 278 Pfam PF03099 Biotin/lipoate A/B protein ligase family 80 180 3.0E-11 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RK98_RS03075 34785b376fed0b92d98a010829c98f18 278 Gene3D G3DSA:3.30.930.10 5 269 6.0E-36 T 28-03-2018 RK98_RS03075 34785b376fed0b92d98a010829c98f18 278 SUPERFAMILY SSF55681 12 271 9.94E-64 T 28-03-2018 RK98_RS03075 34785b376fed0b92d98a010829c98f18 278 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 6 275 49.019 T 28-03-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20|MetaCyc: PWY-6987 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 TIGRFAM TIGR04263 SasC_Mrp_aggreg: SasC/Mrp/FmtB intercellular aggregation domain 154 532 4.6E-120 T 28-03-2018 IPR026359 SasC/Mrp/FmtB intercellular aggregation domain RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF04650 YSIRK type signal peptide 5 26 6.2E-8 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1128 1203 4.3E-14 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1668 1742 1.1E-11 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1437 1511 1.4E-16 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 743 818 5.7E-11 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1899 1973 4.5E-11 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1282 1357 1.7E-17 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 666 742 1.4E-13 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 821 895 2.9E-8 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1590 1662 4.4E-16 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1205 1280 2.8E-15 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 591 664 3.3E-10 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 897 973 8.3E-17 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1744 1819 7.2E-16 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1051 1127 1.1E-16 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1821 1897 1.1E-16 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1513 1588 6.1E-15 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 1359 1435 5.7E-16 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Pfam PF07564 Domain of Unknown Function (DUF1542) 974 1049 6.3E-15 T 28-03-2018 IPR011439 Domain of unknown function DUF1542 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 Gene3D G3DSA:1.20.1270.90 520 588 1.4E-4 T 28-03-2018 RK98_RS09420 feaca4e2368560f33d79db1ca3f3f8d5 2481 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 5 41 3.7E-11 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS06465 e5b7c9680baa71c8d6061e0d5931018e 282 Gene3D G3DSA:2.40.30.90 166 282 2.7E-24 T 28-03-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal RK98_RS06465 e5b7c9680baa71c8d6061e0d5931018e 282 PIRSF PIRSF006779 1 277 4.5E-101 T 28-03-2018 IPR002747 SAM-dependent chlorinase/fluorinase RK98_RS06465 e5b7c9680baa71c8d6061e0d5931018e 282 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 5 271 4.8E-69 T 28-03-2018 IPR002747 SAM-dependent chlorinase/fluorinase RK98_RS06465 e5b7c9680baa71c8d6061e0d5931018e 282 SUPERFAMILY SSF101852 170 275 1.44E-28 T 28-03-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal RK98_RS06465 e5b7c9680baa71c8d6061e0d5931018e 282 SUPERFAMILY SSF102522 3 165 7.85E-56 T 28-03-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal RK98_RS06465 e5b7c9680baa71c8d6061e0d5931018e 282 Gene3D G3DSA:3.40.50.10790 3 165 6.8E-53 T 28-03-2018 RK98_RS14320 3b376e1ef8b39007fa972d117f31b73d 296 SUPERFAMILY SSF51658 1 294 1.57E-102 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain RK98_RS14320 3b376e1ef8b39007fa972d117f31b73d 296 SMART SM00518 2 284 4.9E-128 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 RK98_RS14320 3b376e1ef8b39007fa972d117f31b73d 296 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 282 6.2E-100 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 RK98_RS14320 3b376e1ef8b39007fa972d117f31b73d 296 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 174 181 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 RK98_RS14320 3b376e1ef8b39007fa972d117f31b73d 296 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 212 228 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 RK98_RS14320 3b376e1ef8b39007fa972d117f31b73d 296 Gene3D G3DSA:3.20.20.150 1 296 1.8E-57 T 28-03-2018 RK98_RS14320 3b376e1ef8b39007fa972d117f31b73d 296 Pfam PF01261 Xylose isomerase-like TIM barrel 22 236 6.4E-38 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain RK98_RS14320 3b376e1ef8b39007fa972d117f31b73d 296 Hamap MF_00152 Probable endonuclease 4 [nfo]. 1 284 42.955 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 RK98_RS14320 3b376e1ef8b39007fa972d117f31b73d 296 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 68 76 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 RK98_RS01745 37baa07b4eefb06217e079c9d1f0ac07 123 Gene3D G3DSA:1.10.287.510 14 119 2.2E-5 T 28-03-2018 RK98_RS10590 899a813b0eafd247232a4afc622bb17b 224 Gene3D G3DSA:3.30.50.20 146 218 6.7E-4 T 28-03-2018 RK98_RS10590 899a813b0eafd247232a4afc622bb17b 224 Pfam PF16784 Putative HNHc nuclease 21 221 7.0E-81 T 28-03-2018 IPR031879 Fanconi anemia group M protein, MHF binding domain Reactome: R-HSA-6783310 RK98_RS04145 285b3dccca6d71244df57bfd16426cc7 467 SUPERFAMILY SSF52540 217 390 1.91E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04145 285b3dccca6d71244df57bfd16426cc7 467 Pfam PF01580 FtsK/SpoIIIE family 220 305 6.7E-9 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RK98_RS04145 285b3dccca6d71244df57bfd16426cc7 467 Gene3D G3DSA:3.40.50.300 89 393 8.9E-25 T 28-03-2018 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 157 4.4E-56 T 28-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 33.376 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 SUPERFAMILY SSF46557 5 79 9.42E-28 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 Gene3D G3DSA:1.10.287.180 6 77 9.6E-33 T 28-03-2018 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 SUPERFAMILY SSF54534 83 157 2.75E-19 T 28-03-2018 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 157 2.1E-25 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 Pfam PF03449 Transcription elongation factor, N-terminal 8 76 1.3E-32 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 PIRSF PIRSF006092 1 158 2.2E-52 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 RK98_RS14580 bf2b502f3ed53b038251b69dce2d3ad9 158 Gene3D G3DSA:3.10.50.30 78 158 3.3E-24 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 SUPERFAMILY SSF53098 313 468 2.58E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 Gene3D G3DSA:3.40.50.1010 2 184 2.9E-66 T 28-03-2018 IPR029060 PIN domain-like RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 SMART SM00474 302 467 9.7E-9 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 SMART SM00279 173 208 1.1E-16 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 Gene3D G3DSA:1.20.1060.10 492 603 1.8E-33 T 28-03-2018 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 SMART SM00475 2 262 9.3E-144 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 Pfam PF01612 3'-5' exonuclease 314 409 4.2E-5 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 265 1.0E-34 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 168 6.0E-54 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 Gene3D G3DSA:1.10.150.20 185 263 5.9E-30 T 28-03-2018 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 SUPERFAMILY SSF56672 471 876 8.78E-154 T 28-03-2018 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 ProSitePatterns PS00447 DNA polymerase family A signature. 702 721 - T 28-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 Gene3D G3DSA:3.30.420.10 306 491 1.7E-23 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 SMART SM00482 633 840 8.1E-116 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 SUPERFAMILY SSF88723 2 168 2.32E-53 T 28-03-2018 IPR029060 PIN domain-like RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 Gene3D G3DSA:3.30.70.370 604 693 6.9E-15 T 28-03-2018 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 Gene3D G3DSA:3.30.70.370 702 876 2.7E-53 T 28-03-2018 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 TIGRFAM TIGR00593 pola: DNA polymerase I 4 876 0.0 T 28-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 SUPERFAMILY SSF47807 171 286 4.49E-32 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 Pfam PF00476 DNA polymerase family A 500 874 2.0E-156 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 PRINTS PR00868 DNA-polymerase family A (pol I) signature 823 836 1.8E-82 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 691 1.8E-82 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 PRINTS PR00868 DNA-polymerase family A (pol I) signature 702 727 1.8E-82 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 PRINTS PR00868 DNA-polymerase family A (pol I) signature 648 671 1.8E-82 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 PRINTS PR00868 DNA-polymerase family A (pol I) signature 602 624 1.8E-82 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 PRINTS PR00868 DNA-polymerase family A (pol I) signature 625 640 1.8E-82 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 PRINTS PR00868 DNA-polymerase family A (pol I) signature 739 750 1.8E-82 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 PRINTS PR00868 DNA-polymerase family A (pol I) signature 761 772 1.8E-82 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS15020 91356ad2400d45cc37907efe88067d82 876 PRINTS PR00868 DNA-polymerase family A (pol I) signature 793 809 1.8E-82 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12525 58f1f628fd75585c4c2590e89b95a080 548 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 10 548 9.6E-211 T 28-03-2018 IPR019986 DAK2 domain-containing protein YloV RK98_RS12525 58f1f628fd75585c4c2590e89b95a080 548 SUPERFAMILY SSF101473 3 201 2.62E-47 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RK98_RS12525 58f1f628fd75585c4c2590e89b95a080 548 SMART SM01120 35 200 3.3E-71 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RK98_RS12525 58f1f628fd75585c4c2590e89b95a080 548 SMART SM01121 236 548 7.5E-184 T 28-03-2018 IPR033470 Uncharacterised protein, DhaK domain RK98_RS12525 58f1f628fd75585c4c2590e89b95a080 548 Pfam PF02734 DAK2 domain 35 199 3.5E-40 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RK98_RS12525 58f1f628fd75585c4c2590e89b95a080 548 Pfam PF13684 Dihydroxyacetone kinase family 237 548 8.6E-120 T 28-03-2018 IPR033470 Uncharacterised protein, DhaK domain RK98_RS06160 1599dabdd4a9f675347238ce04a636de 420 Pfam PF01076 Plasmid recombination enzyme 1 193 1.7E-73 T 28-03-2018 IPR001668 Plasmid recombination enzyme GO:0003677|GO:0005727|GO:0006310 RK98_RS06160 1599dabdd4a9f675347238ce04a636de 420 Gene3D G3DSA:1.20.5.340 177 354 2.3E-6 T 28-03-2018 RK98_RS14010 43d8471c2774f919883a52d50d1a4eb3 295 Gene3D G3DSA:1.10.150.130 1 109 2.0E-21 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS14010 43d8471c2774f919883a52d50d1a4eb3 295 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 7.3E-26 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RK98_RS14010 43d8471c2774f919883a52d50d1a4eb3 295 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 6 295 1.8E-119 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RK98_RS14010 43d8471c2774f919883a52d50d1a4eb3 295 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 295 57.932 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD RK98_RS14010 43d8471c2774f919883a52d50d1a4eb3 295 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 295 63.166 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 RK98_RS14010 43d8471c2774f919883a52d50d1a4eb3 295 Pfam PF00589 Phage integrase family 110 281 8.1E-52 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS14010 43d8471c2774f919883a52d50d1a4eb3 295 SUPERFAMILY SSF56349 3 290 5.59E-63 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS14010 43d8471c2774f919883a52d50d1a4eb3 295 Gene3D G3DSA:1.10.443.10 110 289 4.0E-49 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 SUPERFAMILY SSF54980 408 503 3.93E-26 T 28-03-2018 IPR035647 EF-G domain III/V-like RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 Gene3D G3DSA:3.30.70.240 399 558 3.7E-28 T 28-03-2018 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 SMART SM00838 407 495 9.5E-5 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 Gene3D G3DSA:2.40.30.10 197 296 1.5E-27 T 28-03-2018 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 303.634 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 Pfam PF00009 Elongation factor Tu GTP binding domain 11 190 1.5E-53 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 SUPERFAMILY SSF52540 9 214 9.27E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.5E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 PRINTS PR00315 GTP-binding elongation factor signature 83 93 3.5E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 PRINTS PR00315 GTP-binding elongation factor signature 135 144 3.5E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.5E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 PRINTS PR00315 GTP-binding elongation factor signature 99 110 3.5E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 Gene3D G3DSA:3.30.70.870 297 376 4.8E-26 T 28-03-2018 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 Gene3D G3DSA:3.40.50.300 8 194 6.9E-38 T 28-03-2018 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 3.8E-49 T 28-03-2018 IPR013842 GTP-binding protein LepA, C-terminal RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 SUPERFAMILY SSF54980 301 379 9.35E-18 T 28-03-2018 IPR035647 EF-G domain III/V-like RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 Pfam PF00679 Elongation factor G C-terminus 408 495 2.9E-23 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 Pfam PF03144 Elongation factor Tu domain 2 214 284 2.6E-13 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 185 4.9E-20 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS14455 c0ecafcb8fd6be182cee24a5ed13f0c3 607 SUPERFAMILY SSF50447 175 297 3.33E-33 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS08345 00202fd0d6e590f24ef3a945be7aa654 402 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 12 392 1.5E-86 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 RK98_RS08345 00202fd0d6e590f24ef3a945be7aa654 402 Gene3D G3DSA:1.20.1250.20 203 396 7.8E-18 T 28-03-2018 RK98_RS08345 00202fd0d6e590f24ef3a945be7aa654 402 Pfam PF07690 Major Facilitator Superfamily 21 360 1.1E-43 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS08345 00202fd0d6e590f24ef3a945be7aa654 402 Gene3D G3DSA:1.20.1250.20 1 201 2.2E-35 T 28-03-2018 RK98_RS08345 00202fd0d6e590f24ef3a945be7aa654 402 SUPERFAMILY SSF103473 4 392 3.01E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS12075 03d9818b28ee27b4df8a7b49b657de30 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 1.7E-39 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RK98_RS12075 03d9818b28ee27b4df8a7b49b657de30 104 Gene3D G3DSA:3.40.30.10 1 104 8.4E-37 T 28-03-2018 RK98_RS12075 03d9818b28ee27b4df8a7b49b657de30 104 PRINTS PR00421 Thioredoxin family signature 28 37 2.4E-8 T 28-03-2018 RK98_RS12075 03d9818b28ee27b4df8a7b49b657de30 104 PRINTS PR00421 Thioredoxin family signature 20 28 2.4E-8 T 28-03-2018 RK98_RS12075 03d9818b28ee27b4df8a7b49b657de30 104 PRINTS PR00421 Thioredoxin family signature 68 79 2.4E-8 T 28-03-2018 RK98_RS12075 03d9818b28ee27b4df8a7b49b657de30 104 PIRSF PIRSF000077 1 104 1.2E-44 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 RK98_RS12075 03d9818b28ee27b4df8a7b49b657de30 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 RK98_RS12075 03d9818b28ee27b4df8a7b49b657de30 104 Pfam PF00085 Thioredoxin 3 103 5.2E-33 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 RK98_RS12075 03d9818b28ee27b4df8a7b49b657de30 104 SUPERFAMILY SSF52833 2 104 4.3E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS13200 52e02c6fec1b27c0b7196f883b7e7410 548 ProSitePatterns PS01303 BCCT family of transporters signature. 319 328 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 RK98_RS13200 52e02c6fec1b27c0b7196f883b7e7410 548 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 503 9.0E-155 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RK98_RS13200 52e02c6fec1b27c0b7196f883b7e7410 548 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 502 1.8E-184 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RK98_RS09680 93a66f3a0fe1469b051eb12e92f18100 242 SUPERFAMILY SSF81336 74 235 4.45E-38 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09680 93a66f3a0fe1469b051eb12e92f18100 242 PRINTS PR00123 ATP synthase A subunit signature 221 236 6.4E-18 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09680 93a66f3a0fe1469b051eb12e92f18100 242 PRINTS PR00123 ATP synthase A subunit signature 167 189 6.4E-18 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09680 93a66f3a0fe1469b051eb12e92f18100 242 PRINTS PR00123 ATP synthase A subunit signature 82 98 6.4E-18 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09680 93a66f3a0fe1469b051eb12e92f18100 242 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 18 237 1.6E-43 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09680 93a66f3a0fe1469b051eb12e92f18100 242 Hamap MF_01393 ATP synthase subunit a [atpB]. 1 241 13.218 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09680 93a66f3a0fe1469b051eb12e92f18100 242 Pfam PF00119 ATP synthase A chain 24 235 7.7E-56 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09680 93a66f3a0fe1469b051eb12e92f18100 242 ProSitePatterns PS00449 ATP synthase a subunit signature. 170 179 - T 28-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09680 93a66f3a0fe1469b051eb12e92f18100 242 Gene3D G3DSA:1.20.120.220 73 242 7.4E-42 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 Gene3D G3DSA:3.50.50.60 122 239 3.5E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 466 2.1E-170 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 1.8E-34 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 Gene3D G3DSA:1.10.287.990 44 109 2.0E-23 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 7.6E-42 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 7.6E-42 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 7.6E-42 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 7.6E-42 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 7.6E-42 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 329 2.3E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 SUPERFAMILY SSF51905 7 339 1.68E-64 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 Gene3D G3DSA:3.50.50.60 240 340 2.7E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 Gene3D G3DSA:3.30.390.30 341 463 1.0E-38 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 7.6E-77 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 7.6E-77 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 7.6E-77 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 7.6E-77 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 7.6E-77 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 7.6E-77 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 7.6E-77 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 7.6E-77 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 7.6E-77 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 Gene3D G3DSA:3.40.50.720 10 43 0.039 T 28-03-2018 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 SUPERFAMILY SSF55424 344 466 1.44E-38 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 RK98_RS11805 6872cd51e1361760fe919ae138fc48fe 468 PIRSF PIRSF000350 3 458 1.2E-95 T 28-03-2018 RK98_RS06330 f05bac1df87f819c12367766cb9808ed 45 Pfam PF00468 Ribosomal protein L34 3 45 7.8E-23 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS06330 f05bac1df87f819c12367766cb9808ed 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 15.729 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS06330 f05bac1df87f819c12367766cb9808ed 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 7.9E-20 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS06330 f05bac1df87f819c12367766cb9808ed 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 28-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS06330 f05bac1df87f819c12367766cb9808ed 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 27 2.0E-7 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 Gene3D G3DSA:3.20.20.140 322 568 4.7E-42 T 28-03-2018 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 SUPERFAMILY SSF89550 333 562 4.05E-48 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 Pfam PF14791 DNA polymerase beta thumb 254 314 4.4E-15 T 28-03-2018 IPR029398 DNA polymerase beta, thumb domain RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 Pfam PF14716 Helix-hairpin-helix domain 4 67 9.7E-19 T 28-03-2018 IPR010996 DNA polymerase beta-like, N-terminal domain RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 SMART SM00278 48 67 90.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 SMART SM00278 123 142 160.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 SMART SM00278 88 107 85.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 PIRSF PIRSF005047 1 566 3.9E-232 T 28-03-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 180 199 1.2E-6 T 28-03-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 55 72 1.2E-6 T 28-03-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 296 313 1.2E-6 T 28-03-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 SMART SM00481 334 413 3.2E-12 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 Pfam PF02811 PHP domain 335 476 1.4E-7 T 28-03-2018 IPR004013 PHP domain GO:0003824 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 SMART SM00483 1 314 1.3E-42 T 28-03-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 Gene3D G3DSA:3.30.210.10 252 313 1.7E-14 T 28-03-2018 IPR029398 DNA polymerase beta, thumb domain RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 SUPERFAMILY SSF81301 152 314 3.2E-42 T 28-03-2018 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 Gene3D G3DSA:1.10.150.110 1 82 4.8E-20 T 28-03-2018 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 Gene3D G3DSA:3.30.460.10 152 245 1.9E-20 T 28-03-2018 RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 SUPERFAMILY SSF47802 2 81 1.57E-20 T 28-03-2018 IPR010996 DNA polymerase beta-like, N-terminal domain RK98_RS12065 ac06a1d076640be1f9312f7aef668d6e 570 Gene3D G3DSA:1.10.150.20 86 146 1.2E-9 T 28-03-2018 RK98_RS01560 4357d029d61724cabc2eea6aef2d7d2f 98 Pfam PF08460 Bacterial SH3 domain 16 78 4.0E-8 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type RK98_RS01560 4357d029d61724cabc2eea6aef2d7d2f 98 SMART SM00287 16 85 1.5E-13 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type RK98_RS01560 4357d029d61724cabc2eea6aef2d7d2f 98 Gene3D G3DSA:2.30.30.410 4 96 3.6E-14 T 28-03-2018 RK98_RS02545 dcdfc321e37901fa8d5cce535bacdbe4 517 PIRSF PIRSF002457 8 517 1.3E-129 T 28-03-2018 IPR030676 Citrate carrier CitT-related RK98_RS02545 dcdfc321e37901fa8d5cce535bacdbe4 517 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 41 511 9.1E-77 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RK98_RS02545 dcdfc321e37901fa8d5cce535bacdbe4 517 Pfam PF00939 Sodium:sulfate symporter transmembrane region 28 517 1.1E-109 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RK98_RS00385 5b0586cd3484a5ac1e9781ff0354f80d 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 38 53 4.7E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS00385 5b0586cd3484a5ac1e9781ff0354f80d 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 4.7E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS00385 5b0586cd3484a5ac1e9781ff0354f80d 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 4.7E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS00385 5b0586cd3484a5ac1e9781ff0354f80d 275 Pfam PF12146 Serine aminopeptidase, S33 9 244 2.8E-42 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 RK98_RS00385 5b0586cd3484a5ac1e9781ff0354f80d 275 SUPERFAMILY SSF53474 5 258 2.48E-28 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS00385 5b0586cd3484a5ac1e9781ff0354f80d 275 Gene3D G3DSA:3.40.50.1820 2 259 5.8E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 SUPERFAMILY SSF51905 197 503 2.16E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 335 355 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 206 482 1.2E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 323 7.8E-39 T 28-03-2018 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 365 7.8E-39 T 28-03-2018 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 457 479 7.8E-39 T 28-03-2018 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 431 447 7.8E-39 T 28-03-2018 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 208 227 7.8E-39 T 28-03-2018 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 Gene3D G3DSA:3.50.50.60 326 433 2.9E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 507 1.5E-245 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 Gene3D G3DSA:3.50.50.60 434 507 3.0E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 Pfam PF13192 Thioredoxin domain 123 188 6.0E-6 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PIRSF PIRSF000238 1 507 2.6E-245 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 SUPERFAMILY SSF52833 1 99 7.38E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 Gene3D G3DSA:3.40.30.10 1 92 6.9E-26 T 28-03-2018 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 207 229 2.7E-62 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 306 314 2.7E-62 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 395 411 2.7E-62 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 433 454 2.7E-62 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 467 485 2.7E-62 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 259 269 2.7E-62 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 343 367 2.7E-62 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 328 340 2.7E-62 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 254 2.7E-62 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 SUPERFAMILY SSF52833 104 191 1.53E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 Gene3D G3DSA:3.50.50.60 193 325 1.2E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS04325 e3cfe15ad70308c92389c6dea61a15c1 507 Gene3D G3DSA:3.40.30.10 101 192 6.2E-4 T 28-03-2018 RK98_RS13360 d2dfd5d271e8e1f24c60bc1bfd43ff90 255 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 251 4.6E-55 T 28-03-2018 IPR000150 Cof family GO:0016787 RK98_RS13360 d2dfd5d271e8e1f24c60bc1bfd43ff90 255 SUPERFAMILY SSF56784 3 254 1.12E-37 T 28-03-2018 IPR023214 HAD-like domain RK98_RS13360 d2dfd5d271e8e1f24c60bc1bfd43ff90 255 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 216 1.4E-17 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RK98_RS13360 d2dfd5d271e8e1f24c60bc1bfd43ff90 255 Pfam PF08282 haloacid dehalogenase-like hydrolase 3 250 3.5E-36 T 28-03-2018 IPR023214 HAD-like domain RK98_RS13360 d2dfd5d271e8e1f24c60bc1bfd43ff90 255 Gene3D G3DSA:3.40.50.1000 2 243 8.2E-17 T 28-03-2018 IPR023214 HAD-like domain RK98_RS02180 4b71dab0aaffcdb6dd33aef9a25ec7a2 279 SUPERFAMILY SSF54106 50 94 4.97E-9 T 28-03-2018 IPR018392 LysM domain RK98_RS02180 4b71dab0aaffcdb6dd33aef9a25ec7a2 279 SMART SM00257 52 95 1.3E-5 T 28-03-2018 IPR018392 LysM domain RK98_RS02180 4b71dab0aaffcdb6dd33aef9a25ec7a2 279 Pfam PF01476 LysM domain 53 93 2.7E-8 T 28-03-2018 IPR018392 LysM domain RK98_RS02180 4b71dab0aaffcdb6dd33aef9a25ec7a2 279 SUPERFAMILY SSF54001 168 262 9.12E-20 T 28-03-2018 RK98_RS02180 4b71dab0aaffcdb6dd33aef9a25ec7a2 279 Gene3D G3DSA:3.10.350.10 40 130 3.5E-14 T 28-03-2018 RK98_RS02180 4b71dab0aaffcdb6dd33aef9a25ec7a2 279 Pfam PF05257 CHAP domain 175 257 3.0E-16 T 28-03-2018 IPR007921 CHAP domain RK98_RS13730 2d6f43153767eb582b4a8399e0547e15 187 PIRSF PIRSF021290 2 180 5.8E-69 T 28-03-2018 IPR010697 Protein of unknown function DUF1273 RK98_RS13730 2d6f43153767eb582b4a8399e0547e15 187 Pfam PF06908 Protein of unknown function (DUF1273) 5 172 2.0E-68 T 28-03-2018 IPR010697 Protein of unknown function DUF1273 RK98_RS13730 2d6f43153767eb582b4a8399e0547e15 187 Gene3D G3DSA:3.40.50.450 1 181 3.7E-32 T 28-03-2018 RK98_RS13730 2d6f43153767eb582b4a8399e0547e15 187 Hamap MF_01575 UPF0398 protein . 2 178 35.176 T 28-03-2018 IPR010697 Protein of unknown function DUF1273 RK98_RS13730 2d6f43153767eb582b4a8399e0547e15 187 SUPERFAMILY SSF102405 3 177 2.65E-60 T 28-03-2018 RK98_RS12435 0b138ea16b86580f61aeac5a16153c78 565 Gene3D G3DSA:2.30.310.10 1 165 1.2E-46 T 28-03-2018 RK98_RS12435 0b138ea16b86580f61aeac5a16153c78 565 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 441 9.9E-142 T 28-03-2018 RK98_RS12435 0b138ea16b86580f61aeac5a16153c78 565 Pfam PF05670 Domain of unknown function (DUF814) 449 533 3.5E-26 T 28-03-2018 IPR008532 Domain of unknown function DUF814 RK98_RS12435 0b138ea16b86580f61aeac5a16153c78 565 Gene3D G3DSA:1.10.8.50 166 235 1.8E-19 T 28-03-2018 RK98_RS12435 0b138ea16b86580f61aeac5a16153c78 565 Gene3D G3DSA:3.40.970.40 238 288 4.9E-12 T 28-03-2018 RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 SMART SM00448 2 115 2.4E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 SMART SM00421 137 194 3.0E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 SUPERFAMILY SSF52172 2 127 1.28E-28 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 SUPERFAMILY SSF46894 132 200 3.16E-14 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 Gene3D G3DSA:3.40.50.2300 2 137 2.3E-29 T 28-03-2018 RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.6E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 Gene3D G3DSA:1.10.10.10 138 200 1.3E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13055 d538f4bc430646c1f4b0796a0f1cb93a 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 191 1.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 RK98_RS06920 2f8bb7e7890f0c1217aa5413842e73c0 296 Gene3D G3DSA:3.20.20.70 1 293 1.0E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS06920 2f8bb7e7890f0c1217aa5413842e73c0 296 SUPERFAMILY SSF51569 4 294 7.43E-94 T 28-03-2018 RK98_RS06920 2f8bb7e7890f0c1217aa5413842e73c0 296 Hamap MF_00729 Fructose-bisphosphate aldolase class 1 [fda]. 2 293 53.665 T 28-03-2018 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 RK98_RS06920 2f8bb7e7890f0c1217aa5413842e73c0 296 Pfam PF00274 Fructose-bisphosphate aldolase class-I 10 211 4.3E-12 T 28-03-2018 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 SUPERFAMILY SSF50203 29 148 2.2E-42 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 Gene3D G3DSA:3.10.20.120 140 255 3.7E-41 T 28-03-2018 RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 178 201 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 Gene3D G3DSA:2.40.50.110 61 139 1.8E-28 T 28-03-2018 RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 ProSitePatterns PS00277 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin signature 1. 139 148 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 SUPERFAMILY SSF54334 152 265 5.76E-38 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 Pfam PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain 53 144 1.4E-17 T 28-03-2018 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold GO:0009405 RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 157 261 8.7E-30 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 PRINTS PR01898 Bacterial superantigen superfamily signature 135 148 2.7E-30 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 PRINTS PR01898 Bacterial superantigen superfamily signature 191 205 2.7E-30 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 PRINTS PR01898 Bacterial superantigen superfamily signature 178 191 2.7E-30 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 PRINTS PR01898 Bacterial superantigen superfamily signature 94 120 2.7E-30 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 PRINTS PR01898 Bacterial superantigen superfamily signature 244 260 2.7E-30 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 PRINTS PR00279 Bacterial toxin signature 178 194 7.3E-12 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS01915 65d322da63ddcc3f76cc813d6db774df 266 PRINTS PR00279 Bacterial toxin signature 137 149 7.3E-12 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS12400 6709a5bdb9b444a448e5b477f4073550 424 Gene3D G3DSA:3.20.20.140 67 405 8.9E-107 T 28-03-2018 RK98_RS12400 6709a5bdb9b444a448e5b477f4073550 424 Hamap MF_00220_B Dihydroorotase [pyrC]. 1 423 47.434 T 28-03-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12400 6709a5bdb9b444a448e5b477f4073550 424 ProSitePatterns PS00483 Dihydroorotase signature 2. 301 312 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12400 6709a5bdb9b444a448e5b477f4073550 424 ProSitePatterns PS00482 Dihydroorotase signature 1. 56 64 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12400 6709a5bdb9b444a448e5b477f4073550 424 SUPERFAMILY SSF51338 373 423 3.73E-26 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS12400 6709a5bdb9b444a448e5b477f4073550 424 SUPERFAMILY SSF51338 3 54 3.73E-26 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS12400 6709a5bdb9b444a448e5b477f4073550 424 SUPERFAMILY SSF51556 53 366 3.1E-111 T 28-03-2018 IPR032466 Metal-dependent hydrolase RK98_RS12400 6709a5bdb9b444a448e5b477f4073550 424 Gene3D G3DSA:2.30.40.10 2 66 1.6E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS12400 6709a5bdb9b444a448e5b477f4073550 424 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 14 419 5.2E-142 T 28-03-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12400 6709a5bdb9b444a448e5b477f4073550 424 Pfam PF01979 Amidohydrolase family 49 418 2.8E-47 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 RK98_RS04855 02fc99a989709d761dc718cd355b6fec 297 Pfam PF05257 CHAP domain 192 273 1.8E-12 T 28-03-2018 IPR007921 CHAP domain RK98_RS04855 02fc99a989709d761dc718cd355b6fec 297 SUPERFAMILY SSF54001 192 295 1.96E-17 T 28-03-2018 RK98_RS08740 29492ad34df6960c0f4261e841c34d71 265 Gene3D G3DSA:3.10.20.10 29 110 7.5E-17 T 28-03-2018 RK98_RS08740 29492ad34df6960c0f4261e841c34d71 265 Gene3D G3DSA:3.40.140.10 126 265 4.8E-46 T 28-03-2018 RK98_RS08740 29492ad34df6960c0f4261e841c34d71 265 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 3 261 30.115 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 RK98_RS08740 29492ad34df6960c0f4261e841c34d71 265 Pfam PF02634 FdhD/NarQ family 27 260 1.6E-71 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 RK98_RS08740 29492ad34df6960c0f4261e841c34d71 265 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 23 261 4.3E-72 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 RK98_RS08740 29492ad34df6960c0f4261e841c34d71 265 SUPERFAMILY SSF53927 9 261 1.2E-72 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 RK98_RS08740 29492ad34df6960c0f4261e841c34d71 265 PIRSF PIRSF015626 1 264 1.5E-72 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 RK98_RS02330 65bac1e99cb83269fb60c785d5b5b6be 288 SUPERFAMILY SSF103481 180 276 1.03E-13 T 28-03-2018 RK98_RS02330 65bac1e99cb83269fb60c785d5b5b6be 288 SUPERFAMILY SSF103481 40 140 7.06E-11 T 28-03-2018 RK98_RS02330 65bac1e99cb83269fb60c785d5b5b6be 288 Pfam PF00892 EamA-like transporter family 6 137 3.5E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 RK98_RS02330 65bac1e99cb83269fb60c785d5b5b6be 288 Pfam PF00892 EamA-like transporter family 148 275 6.4E-12 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 RK98_RS07830 a720bbee0345fc19fed16a3d581983c2 283 SUPERFAMILY SSF51735 1 265 4.95E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS07830 a720bbee0345fc19fed16a3d581983c2 283 Gene3D G3DSA:3.40.50.720 1 282 5.7E-32 T 28-03-2018 RK98_RS07830 a720bbee0345fc19fed16a3d581983c2 283 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 222 3.8E-19 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 RK98_RS07875 3e7e830b49540ea343480d9ac83e6025 157 SMART SM00871 1 156 4.8E-22 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding RK98_RS07875 3e7e830b49540ea343480d9ac83e6025 157 Pfam PF06445 GyrI-like small molecule binding domain 1 156 7.4E-13 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain RK98_RS07875 3e7e830b49540ea343480d9ac83e6025 157 SUPERFAMILY SSF55136 1 156 1.86E-17 T 28-03-2018 RK98_RS07875 3e7e830b49540ea343480d9ac83e6025 157 Gene3D G3DSA:3.20.80.10 1 157 5.6E-31 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain RK98_RS02125 01305d25452182828ea1e8268dc2c159 303 SUPERFAMILY SSF52540 10 169 7.35E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02125 01305d25452182828ea1e8268dc2c159 303 Gene3D G3DSA:3.40.50.300 1 174 3.2E-13 T 28-03-2018 RK98_RS02125 01305d25452182828ea1e8268dc2c159 303 PIRSF PIRSF005052 11 300 2.2E-115 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 RK98_RS02125 01305d25452182828ea1e8268dc2c159 303 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 11 297 41.186 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 RK98_RS02125 01305d25452182828ea1e8268dc2c159 303 Pfam PF03668 P-loop ATPase protein family 12 294 8.9E-108 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 RK98_RS04660 dfadaea507d53b3cff769724884f183d 222 SUPERFAMILY SSF51366 2 220 6.31E-65 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RK98_RS04660 dfadaea507d53b3cff769724884f183d 222 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 24 221 1.7E-65 T 28-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 RK98_RS04660 dfadaea507d53b3cff769724884f183d 222 Gene3D G3DSA:3.20.20.70 2 222 6.4E-36 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS04660 dfadaea507d53b3cff769724884f183d 222 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 1 221 40.222 T 28-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 RK98_RS01630 55b7ae4f014bdd3058b45ad0aeac21a7 494 Pfam PF05709 Phage tail protein 25 494 9.7E-48 T 28-03-2018 IPR008841 Siphovirus-type tail component RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 PRINTS PR01035 Tetracycline resistance protein signature 14 30 2.4E-25 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 PRINTS PR01035 Tetracycline resistance protein signature 328 351 2.4E-25 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 PRINTS PR01035 Tetracycline resistance protein signature 129 151 2.4E-25 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 PRINTS PR01035 Tetracycline resistance protein signature 240 260 2.4E-25 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 PRINTS PR01035 Tetracycline resistance protein signature 268 289 2.4E-25 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 PRINTS PR01035 Tetracycline resistance protein signature 157 177 2.4E-25 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 Pfam PF07690 Major Facilitator Superfamily 9 334 7.8E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 Gene3D G3DSA:1.20.1250.20 1 190 7.7E-38 T 28-03-2018 RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 41 179 1.7E-41 T 28-03-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 SUPERFAMILY SSF103473 3 383 5.36E-69 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS02520 cd2c557f68b443ed1299aec66260ee4d 388 Gene3D G3DSA:1.20.1250.20 191 388 6.1E-22 T 28-03-2018 RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 PRINTS PR01467 Bacterial arginine repressor signature 90 103 7.8E-10 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 PRINTS PR01467 Bacterial arginine repressor signature 38 53 7.8E-10 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 PRINTS PR01467 Bacterial arginine repressor signature 120 135 7.8E-10 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 68 8.8E-8 T 28-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 SUPERFAMILY SSF55252 82 148 7.85E-18 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 92 129 2.0E-15 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 Gene3D G3DSA:1.10.10.10 3 67 3.9E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 Gene3D G3DSA:3.30.1360.40 76 147 5.6E-19 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 32.533 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 Pfam PF02863 Arginine repressor, C-terminal domain 84 147 1.1E-17 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 RK98_RS06720 1d8d134c57491f4e355ad8585f888499 149 SUPERFAMILY SSF46785 3 73 5.92E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 Pfam PF02384 N-6 DNA Methylase 178 479 3.7E-110 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 SUPERFAMILY SSF53335 13 51 7.83E-132 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 SUPERFAMILY SSF53335 87 513 7.83E-132 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 Pfam PF12161 HsdM N-terminal domain 14 163 6.7E-21 T 28-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 201 217 7.1E-24 T 28-03-2018 RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 331 355 7.1E-24 T 28-03-2018 RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 227 241 7.1E-24 T 28-03-2018 RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 295 307 7.1E-24 T 28-03-2018 RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 298 304 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 Gene3D G3DSA:3.40.50.150 199 474 7.7E-73 T 28-03-2018 RK98_RS04020 a1de34c08ed63990d77208883ca9163a 518 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 10 494 2.7E-139 T 28-03-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 RK98_RS13440 84fa9ab1945d391805a3fa226d3b8ffc 533 Pfam PF12848 ABC transporter 224 305 2.2E-20 T 28-03-2018 IPR032781 ABC-transporter extension domain RK98_RS13440 84fa9ab1945d391805a3fa226d3b8ffc 533 SMART SM00382 26 238 5.7E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS13440 84fa9ab1945d391805a3fa226d3b8ffc 533 SMART SM00382 344 514 1.6E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS13440 84fa9ab1945d391805a3fa226d3b8ffc 533 Gene3D G3DSA:3.40.50.300 1 283 7.2E-56 T 28-03-2018 RK98_RS13440 84fa9ab1945d391805a3fa226d3b8ffc 533 Gene3D G3DSA:3.40.50.300 284 532 4.9E-41 T 28-03-2018 RK98_RS13440 84fa9ab1945d391805a3fa226d3b8ffc 533 SUPERFAMILY SSF52540 296 528 2.75E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13440 84fa9ab1945d391805a3fa226d3b8ffc 533 Pfam PF00005 ABC transporter 18 184 1.0E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS13440 84fa9ab1945d391805a3fa226d3b8ffc 533 Pfam PF00005 ABC transporter 335 469 7.4E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS13440 84fa9ab1945d391805a3fa226d3b8ffc 533 SUPERFAMILY SSF52540 125 252 2.67E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13440 84fa9ab1945d391805a3fa226d3b8ffc 533 SUPERFAMILY SSF52540 2 92 2.67E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09630 36aeb14287de90b488d3ea2cbb585fbd 199 Gene3D G3DSA:3.40.50.300 7 141 1.6E-47 T 28-03-2018 RK98_RS09630 36aeb14287de90b488d3ea2cbb585fbd 199 Pfam PF00265 Thymidine kinase 8 187 2.4E-58 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 RK98_RS09630 36aeb14287de90b488d3ea2cbb585fbd 199 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 28-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 RK98_RS09630 36aeb14287de90b488d3ea2cbb585fbd 199 Gene3D G3DSA:3.30.60.20 142 199 9.2E-18 T 28-03-2018 RK98_RS09630 36aeb14287de90b488d3ea2cbb585fbd 199 SUPERFAMILY SSF52540 8 142 5.75E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09630 36aeb14287de90b488d3ea2cbb585fbd 199 PIRSF PIRSF035805 5 199 4.8E-66 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 RK98_RS09630 36aeb14287de90b488d3ea2cbb585fbd 199 SUPERFAMILY SSF57716 142 194 1.5E-15 T 28-03-2018 RK98_RS09630 36aeb14287de90b488d3ea2cbb585fbd 199 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 36.775 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 RK98_RS06005 0e1c0a58791315af20ab1b5d725ab62d 449 SMART SM00857 4 148 4.5E-42 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RK98_RS06005 0e1c0a58791315af20ab1b5d725ab62d 449 Gene3D G3DSA:3.90.580.10 231 367 0.0016 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 RK98_RS06005 0e1c0a58791315af20ab1b5d725ab62d 449 Pfam PF13408 Recombinase zinc beta ribbon domain 262 321 2.9E-7 T 28-03-2018 IPR025827 Recombinase zinc beta ribbon domain RK98_RS06005 0e1c0a58791315af20ab1b5d725ab62d 449 Gene3D G3DSA:3.40.50.1390 1 155 5.0E-36 T 28-03-2018 RK98_RS06005 0e1c0a58791315af20ab1b5d725ab62d 449 Pfam PF00239 Resolvase, N terminal domain 4 147 1.1E-36 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RK98_RS06005 0e1c0a58791315af20ab1b5d725ab62d 449 Pfam PF07508 Recombinase 169 250 4.2E-10 T 28-03-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 RK98_RS06005 0e1c0a58791315af20ab1b5d725ab62d 449 SUPERFAMILY SSF53041 4 147 1.7E-31 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 Gene3D G3DSA:3.60.21.10 3 262 7.1E-50 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 Pfam PF02872 5'-nucleotidase, C-terminal domain 281 404 1.0E-7 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 SUPERFAMILY SSF56300 2 256 1.0E-60 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 Gene3D G3DSA:3.90.780.10 263 439 9.1E-25 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 Pfam PF00149 Calcineurin-like phosphoesterase 3 200 1.9E-10 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 SUPERFAMILY SSF55816 281 436 6.02E-22 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 PIRSF PIRSF036361 1 439 2.0E-188 T 28-03-2018 IPR011240 Phosphoesterase-related protein YunD RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 PRINTS PR01607 Apyrase family signature 315 338 1.4E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 PRINTS PR01607 Apyrase family signature 391 410 1.4E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 PRINTS PR01607 Apyrase family signature 1 19 1.4E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 PRINTS PR01607 Apyrase family signature 210 230 1.4E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 PRINTS PR01607 Apyrase family signature 182 205 1.4E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS10900 0cb60b7a4a083966ea787e9074cff311 439 PRINTS PR01607 Apyrase family signature 163 180 1.4E-21 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS12915 95fd0e13f957c11c5186782db31909b4 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 449 2.3E-63 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RK98_RS12915 95fd0e13f957c11c5186782db31909b4 498 Gene3D G3DSA:3.30.420.40 248 498 7.3E-79 T 28-03-2018 RK98_RS12915 95fd0e13f957c11c5186782db31909b4 498 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 493 1.4E-229 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 RK98_RS12915 95fd0e13f957c11c5186782db31909b4 498 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 59.221 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 RK98_RS12915 95fd0e13f957c11c5186782db31909b4 498 SUPERFAMILY SSF53067 254 492 1.39E-84 T 28-03-2018 RK98_RS12915 95fd0e13f957c11c5186782db31909b4 498 Gene3D G3DSA:3.30.420.40 1 247 7.4E-87 T 28-03-2018 RK98_RS12915 95fd0e13f957c11c5186782db31909b4 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RK98_RS12915 95fd0e13f957c11c5186782db31909b4 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 7.6E-89 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RK98_RS12915 95fd0e13f957c11c5186782db31909b4 498 SUPERFAMILY SSF53067 3 254 6.85E-97 T 28-03-2018 RK98_RS12915 95fd0e13f957c11c5186782db31909b4 498 PIRSF PIRSF000538 2 498 1.8E-180 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Gene3D G3DSA:3.40.930.10 561 701 1.9E-9 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 SUPERFAMILY SSF63520 193 297 9.02E-17 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Pfam PF05043 Mga helix-turn-helix domain 82 166 5.6E-7 T 28-03-2018 IPR007737 Mga helix-turn-helix domain RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 SUPERFAMILY SSF63520 311 406 3.14E-18 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 SUPERFAMILY SSF52794 410 483 2.77E-11 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 412 468 3.4E-6 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 577 679 8.7E-9 T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 SUPERFAMILY SSF55804 571 677 1.27E-12 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Gene3D G3DSA:1.10.1790.10 162 296 1.1E-15 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Gene3D G3DSA:1.10.1790.10 297 406 1.3E-15 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Pfam PF08279 HTH domain 6 49 1.6E-7 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Pfam PF00874 PRD domain 208 293 1.5E-13 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Pfam PF00874 PRD domain 315 401 3.4E-17 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Gene3D G3DSA:3.40.50.2300 409 496 6.0E-20 T 28-03-2018 RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Gene3D G3DSA:1.10.10.10 86 154 3.6E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS09435 91fc117e8cfd71c09c7256637fc3a3f2 710 Gene3D G3DSA:1.10.10.10 1 68 2.9E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07890 5c1c757b3094d64e6b521ee7a66add4b 380 Pfam PF02595 Glycerate kinase family 6 377 2.7E-145 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RK98_RS07890 5c1c757b3094d64e6b521ee7a66add4b 380 Gene3D G3DSA:3.90.1510.10 46 280 1.7E-92 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 RK98_RS07890 5c1c757b3094d64e6b521ee7a66add4b 380 SUPERFAMILY SSF110738 5 379 5.75E-137 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RK98_RS07890 5c1c757b3094d64e6b521ee7a66add4b 380 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 5 379 6.8E-174 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RK98_RS07890 5c1c757b3094d64e6b521ee7a66add4b 380 PIRSF PIRSF006078 4 380 1.6E-137 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RK98_RS04775 5ae74432928aafe3e666a9ba350b284c 166 SUPERFAMILY SSF160424 3 165 1.02E-57 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04775 5ae74432928aafe3e666a9ba350b284c 166 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 157 1.1E-75 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04775 5ae74432928aafe3e666a9ba350b284c 166 Pfam PF04634 Protein of unknown function, DUF600 7 151 4.1E-47 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04775 5ae74432928aafe3e666a9ba350b284c 166 Gene3D G3DSA:3.30.500.20 4 116 7.6E-34 T 28-03-2018 RK98_RS06690 24d5d8fa9919cebd533b4259e7c2322a 312 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 102 310 1.2E-38 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 RK98_RS06690 24d5d8fa9919cebd533b4259e7c2322a 312 Gene3D G3DSA:2.60.120.10 231 310 2.0E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold RK98_RS06690 24d5d8fa9919cebd533b4259e7c2322a 312 Pfam PF01238 Phosphomannose isomerase type I 3 193 4.8E-41 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 RK98_RS06690 24d5d8fa9919cebd533b4259e7c2322a 312 Gene3D G3DSA:2.60.120.10 1 219 1.7E-59 T 28-03-2018 IPR014710 RmlC-like jelly roll fold RK98_RS06690 24d5d8fa9919cebd533b4259e7c2322a 312 PIRSF PIRSF036894 1 312 1.1E-135 T 28-03-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 RK98_RS06690 24d5d8fa9919cebd533b4259e7c2322a 312 SUPERFAMILY SSF51182 3 310 3.24E-103 T 28-03-2018 IPR011051 RmlC-like cupin domain RK98_RS12385 dbb4507a13f3d10ab2b55329c711ea07 175 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 3 175 34.167 T 28-03-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 RK98_RS12385 dbb4507a13f3d10ab2b55329c711ea07 175 Gene3D G3DSA:3.40.50.2020 1 175 5.0E-30 T 28-03-2018 RK98_RS12385 dbb4507a13f3d10ab2b55329c711ea07 175 Pfam PF00156 Phosphoribosyl transferase domain 6 163 5.5E-19 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RK98_RS12385 dbb4507a13f3d10ab2b55329c711ea07 175 SUPERFAMILY SSF53271 4 170 1.11E-35 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like RK98_RS13960 c90bf5106358de6809f9a32b8f07bbe2 298 Pfam PF07901 Protein of unknown function (DUF1672) 34 295 7.2E-133 T 28-03-2018 IPR012873 Protein of unknown function DUF1672 RK98_RS13960 c90bf5106358de6809f9a32b8f07bbe2 298 Gene3D G3DSA:3.40.190.10 5 252 0.0016 T 28-03-2018 RK98_RS07260 1bb9cbbbd66c165cbf1cb96fe532a5ab 287 SUPERFAMILY SSF46785 1 81 3.38E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07260 1bb9cbbbd66c165cbf1cb96fe532a5ab 287 Gene3D G3DSA:3.40.190.10 172 260 4.0E-16 T 28-03-2018 RK98_RS07260 1bb9cbbbd66c165cbf1cb96fe532a5ab 287 Gene3D G3DSA:1.10.10.10 1 78 5.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07260 1bb9cbbbd66c165cbf1cb96fe532a5ab 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 1 57 1.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS07260 1bb9cbbbd66c165cbf1cb96fe532a5ab 287 Gene3D G3DSA:3.40.190.10 82 171 1.8E-18 T 28-03-2018 RK98_RS07260 1bb9cbbbd66c165cbf1cb96fe532a5ab 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 45 3.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS07260 1bb9cbbbd66c165cbf1cb96fe532a5ab 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 34 3.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS07260 1bb9cbbbd66c165cbf1cb96fe532a5ab 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 13 24 3.1E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS07260 1bb9cbbbd66c165cbf1cb96fe532a5ab 287 Pfam PF03466 LysR substrate binding domain 83 286 4.8E-42 T 28-03-2018 IPR005119 LysR, substrate-binding RK98_RS07260 1bb9cbbbd66c165cbf1cb96fe532a5ab 287 SUPERFAMILY SSF53850 85 286 4.71E-37 T 28-03-2018 RK98_RS11590 04f3d20cbcf376ff395a8b8f017f2a75 405 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 86 233 1.3E-41 T 28-03-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RK98_RS11590 04f3d20cbcf376ff395a8b8f017f2a75 405 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 86 232 1.7E-33 T 28-03-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 291 5.8E-98 T 28-03-2018 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 6 319 7.2E-138 T 28-03-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 Gene3D G3DSA:3.50.50.60 144 199 2.5E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 SUPERFAMILY SSF51905 7 320 2.98E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.3E-12 T 28-03-2018 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 1.3E-12 T 28-03-2018 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 1.3E-12 T 28-03-2018 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 1.3E-12 T 28-03-2018 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 Gene3D G3DSA:3.50.50.60 2 143 2.4E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.1E-18 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 119 127 1.1E-18 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 154 178 1.1E-18 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 211 227 1.1E-18 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 287 305 1.1E-18 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS13915 00ee2fda23ef84aa6400acdedcddb026 328 Gene3D G3DSA:3.50.50.60 200 321 1.3E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS01585 da35734698f76b3e950631bafc96ea41 243 Pfam PF05257 CHAP domain 25 109 9.5E-12 T 28-03-2018 IPR007921 CHAP domain RK98_RS01585 da35734698f76b3e950631bafc96ea41 243 Gene3D G3DSA:3.90.1720.10 3 151 0.0011 T 28-03-2018 RK98_RS01585 da35734698f76b3e950631bafc96ea41 243 SUPERFAMILY SSF54001 21 136 3.53E-15 T 28-03-2018 RK98_RS13665 788e8034c0a0d0744eeb21b2ef415dc4 133 Pfam PF13456 Reverse transcriptase-like 5 124 9.4E-17 T 28-03-2018 RK98_RS13665 788e8034c0a0d0744eeb21b2ef415dc4 133 SUPERFAMILY SSF53098 2 122 1.09E-25 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS13665 788e8034c0a0d0744eeb21b2ef415dc4 133 Gene3D G3DSA:3.30.420.10 1 133 2.0E-22 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS08140 168d0005361fd03f6d25b83d6d1f319e 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 324 6.8E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS08140 168d0005361fd03f6d25b83d6d1f319e 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 302 6.8E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS08140 168d0005361fd03f6d25b83d6d1f319e 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 343 6.8E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS08140 168d0005361fd03f6d25b83d6d1f319e 344 PIRSF PIRSF037432 1 344 2.9E-192 T 28-03-2018 IPR017203 Signal transduction histidine kinase, NreB GO:0000155|GO:0004673|GO:0005506|GO:0005524|GO:0005737|GO:0018106 RK98_RS08140 168d0005361fd03f6d25b83d6d1f319e 344 Gene3D G3DSA:3.30.450.20 11 153 6.4E-8 T 28-03-2018 RK98_RS08140 168d0005361fd03f6d25b83d6d1f319e 344 Gene3D G3DSA:3.30.565.10 211 344 3.0E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS08140 168d0005361fd03f6d25b83d6d1f319e 344 SMART SM00387 252 344 5.4E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS08140 168d0005361fd03f6d25b83d6d1f319e 344 Pfam PF07730 Histidine kinase 149 214 6.5E-14 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 RK98_RS08140 168d0005361fd03f6d25b83d6d1f319e 344 SUPERFAMILY SSF55874 220 343 3.8E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS08140 168d0005361fd03f6d25b83d6d1f319e 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 257 343 1.3E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS00250 df068241ae8dfecc556b40d0eb370106 363 SMART SM00830 9 88 1.9E-24 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RK98_RS00250 df068241ae8dfecc556b40d0eb370106 363 Pfam PF00793 DAHP synthetase I family 108 351 1.1E-85 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 RK98_RS00250 df068241ae8dfecc556b40d0eb370106 363 Pfam PF01817 Chorismate mutase type II 9 86 1.8E-20 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RK98_RS00250 df068241ae8dfecc556b40d0eb370106 363 SUPERFAMILY SSF48600 4 87 2.75E-21 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RK98_RS00250 df068241ae8dfecc556b40d0eb370106 363 Gene3D G3DSA:1.20.59.10 3 89 5.8E-24 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RK98_RS00250 df068241ae8dfecc556b40d0eb370106 363 SUPERFAMILY SSF51569 60 357 1.74E-98 T 28-03-2018 RK98_RS00250 df068241ae8dfecc556b40d0eb370106 363 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 351 4.7E-115 T 28-03-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 RK98_RS00250 df068241ae8dfecc556b40d0eb370106 363 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 101 4.4E-51 T 28-03-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 RK98_RS00250 df068241ae8dfecc556b40d0eb370106 363 Gene3D G3DSA:3.20.20.70 94 356 2.7E-72 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS11230 b736ed17db5eb927aa97c4bcb889b94d 360 SUPERFAMILY SSF52540 5 255 4.82E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11230 b736ed17db5eb927aa97c4bcb889b94d 360 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 8.0E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RK98_RS11230 b736ed17db5eb927aa97c4bcb889b94d 360 Pfam PF00005 ABC transporter 26 184 1.6E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS11230 b736ed17db5eb927aa97c4bcb889b94d 360 Gene3D G3DSA:3.40.50.300 2 335 1.2E-76 T 28-03-2018 RK98_RS11230 b736ed17db5eb927aa97c4bcb889b94d 360 SMART SM00382 34 234 7.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS11230 b736ed17db5eb927aa97c4bcb889b94d 360 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 299 5.0E-12 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RK98_RS11230 b736ed17db5eb927aa97c4bcb889b94d 360 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS02870 912bf248be4fb07e8e40773e1d270c74 152 Pfam PF03334 Na+/H+ antiporter subunit 22 103 5.3E-22 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 RK98_RS02870 912bf248be4fb07e8e40773e1d270c74 152 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 21 111 3.5E-26 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 RK98_RS06970 230be03bd280b82260e42bc87ccba506 123 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 116 7.6E-52 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RK98_RS06970 230be03bd280b82260e42bc87ccba506 123 SUPERFAMILY SSF50692 1 116 6.21E-49 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain RK98_RS06970 230be03bd280b82260e42bc87ccba506 123 PIRSF PIRSF006246 1 122 1.7E-53 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RK98_RS06970 230be03bd280b82260e42bc87ccba506 123 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 123 69.084 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RK98_RS06970 230be03bd280b82260e42bc87ccba506 123 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 1 89 1.0E-45 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RK98_RS06970 230be03bd280b82260e42bc87ccba506 123 Gene3D G3DSA:2.40.40.20 1 113 7.6E-52 T 28-03-2018 RK98_RS06970 230be03bd280b82260e42bc87ccba506 123 Pfam PF02261 Aspartate decarboxylase 1 110 2.2E-50 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 RK98_RS11175 e7452798359f8f6cf06c5ced9b3128d5 381 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 191 204 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RK98_RS11175 e7452798359f8f6cf06c5ced9b3128d5 381 SUPERFAMILY SSF51569 2 280 3.85E-56 T 28-03-2018 RK98_RS11175 e7452798359f8f6cf06c5ced9b3128d5 381 Pfam PF00682 HMGL-like 2 267 1.4E-56 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 RK98_RS11175 e7452798359f8f6cf06c5ced9b3128d5 381 Gene3D G3DSA:3.20.20.70 1 336 1.0E-74 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS09345 f709174057a24ff7ca27dc229a1846ae 354 Gene3D G3DSA:3.40.50.300 96 321 2.1E-51 T 28-03-2018 RK98_RS09345 f709174057a24ff7ca27dc229a1846ae 354 Gene3D G3DSA:3.30.300.130 2 95 3.9E-7 T 28-03-2018 IPR034904 Fe-S cluster assembly domain RK98_RS09345 f709174057a24ff7ca27dc229a1846ae 354 SUPERFAMILY SSF52540 107 317 1.7E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09345 f709174057a24ff7ca27dc229a1846ae 354 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 349 33.432 T 28-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein RK98_RS09345 f709174057a24ff7ca27dc229a1846ae 354 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 112 348 3.1E-86 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 RK98_RS04685 8faa0cf722c689f04ed0fc43233408c8 406 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 80 3.6E-15 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 RK98_RS04685 8faa0cf722c689f04ed0fc43233408c8 406 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 404 8.7E-58 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 RK98_RS08020 417e61949a189ecae645264f42084bf3 259 Gene3D G3DSA:3.40.190.10 149 246 1.0E-19 T 28-03-2018 RK98_RS08020 417e61949a189ecae645264f42084bf3 259 Gene3D G3DSA:3.40.190.10 1 148 1.1E-36 T 28-03-2018 RK98_RS08020 417e61949a189ecae645264f42084bf3 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 253 2.8E-60 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RK98_RS08020 417e61949a189ecae645264f42084bf3 259 SMART SM00062 34 254 2.7E-69 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RK98_RS08020 417e61949a189ecae645264f42084bf3 259 SMART SM00079 34 253 0.0032 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 RK98_RS08020 417e61949a189ecae645264f42084bf3 259 SUPERFAMILY SSF53850 1 254 4.29E-62 T 28-03-2018 RK98_RS12050 f8b921edc48676319f32775e06803fbc 312 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 25 301 9.5E-68 T 28-03-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 RK98_RS12050 f8b921edc48676319f32775e06803fbc 312 SUPERFAMILY SSF53098 97 308 7.13E-49 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS12050 f8b921edc48676319f32775e06803fbc 312 Pfam PF11858 Domain of unknown function (DUF3378) 3 76 2.0E-20 T 28-03-2018 IPR024568 Ribonuclease HIII, N-terminal RK98_RS12050 f8b921edc48676319f32775e06803fbc 312 Pfam PF01351 Ribonuclease HII 98 301 4.1E-46 T 28-03-2018 IPR024567 Ribonuclease HII/HIII domain RK98_RS12050 f8b921edc48676319f32775e06803fbc 312 PIRSF PIRSF037748 1 310 2.9E-112 T 28-03-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 RK98_RS12050 f8b921edc48676319f32775e06803fbc 312 Gene3D G3DSA:3.30.420.10 95 310 5.8E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS12050 f8b921edc48676319f32775e06803fbc 312 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 309 28.905 T 28-03-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 RK98_RS12050 f8b921edc48676319f32775e06803fbc 312 Gene3D G3DSA:3.30.310.10 1 81 1.9E-4 T 28-03-2018 RK98_RS05130 661cccb3ac81f3288dfb73a1670b574d 403 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 26 138 1.3E-6 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 RK98_RS05130 661cccb3ac81f3288dfb73a1670b574d 403 SUPERFAMILY SSF47203 250 400 8.38E-34 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RK98_RS05130 661cccb3ac81f3288dfb73a1670b574d 403 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 143 236 4.0E-19 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 RK98_RS05130 661cccb3ac81f3288dfb73a1670b574d 403 Gene3D G3DSA:2.40.110.10 142 245 4.6E-26 T 28-03-2018 RK98_RS05130 661cccb3ac81f3288dfb73a1670b574d 403 Gene3D G3DSA:1.20.140.10 246 402 1.9E-31 T 28-03-2018 RK98_RS05130 661cccb3ac81f3288dfb73a1670b574d 403 Gene3D G3DSA:1.10.540.10 1 140 7.5E-12 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 RK98_RS05130 661cccb3ac81f3288dfb73a1670b574d 403 SUPERFAMILY SSF56645 16 247 4.84E-47 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RK98_RS05130 661cccb3ac81f3288dfb73a1670b574d 403 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 396 1.4E-26 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RK98_RS11945 1d1147ba5ba00c5af2f300e6267025b1 180 PIRSF PIRSF004553 1 178 1.8E-46 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 RK98_RS11945 1d1147ba5ba00c5af2f300e6267025b1 180 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 176 5.9E-50 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 RK98_RS11945 1d1147ba5ba00c5af2f300e6267025b1 180 Gene3D G3DSA:3.40.50.150 1 180 1.2E-29 T 28-03-2018 RK98_RS11945 1d1147ba5ba00c5af2f300e6267025b1 180 SUPERFAMILY SSF53335 1 170 1.08E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS11945 1d1147ba5ba00c5af2f300e6267025b1 180 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 115 121 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RK98_RS11945 1d1147ba5ba00c5af2f300e6267025b1 180 Pfam PF03602 Conserved hypothetical protein 95 1 172 1.4E-52 T 28-03-2018 RK98_RS10980 03fb5055156fac6279a10b9a74b6306d 107 Pfam PF07315 Protein of unknown function (DUF1462) 7 101 5.2E-40 T 28-03-2018 IPR009190 Protein of unknown function DUF1462 RK98_RS10980 03fb5055156fac6279a10b9a74b6306d 107 SUPERFAMILY SSF52833 1 105 2.01E-44 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS10980 03fb5055156fac6279a10b9a74b6306d 107 Gene3D G3DSA:3.40.30.30 2 103 2.3E-41 T 28-03-2018 RK98_RS10980 03fb5055156fac6279a10b9a74b6306d 107 PIRSF PIRSF010603 1 107 6.2E-48 T 28-03-2018 IPR009190 Protein of unknown function DUF1462 RK98_RS13130 1acd4d5804cf47eedc6c6f6c84236fc9 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 25.225 T 28-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid RK98_RS13130 1acd4d5804cf47eedc6c6f6c84236fc9 89 Gene3D G3DSA:4.10.830.10 1 89 6.0E-36 T 28-03-2018 RK98_RS13130 1acd4d5804cf47eedc6c6f6c84236fc9 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 50 73 - T 28-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS13130 1acd4d5804cf47eedc6c6f6c84236fc9 89 SUPERFAMILY SSF57716 2 89 1.92E-31 T 28-03-2018 RK98_RS13130 1acd4d5804cf47eedc6c6f6c84236fc9 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 5.1E-28 T 28-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS00785 3614ebdc92830d0a67e69bf5c313b9bb 345 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 340 1.1E-126 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 RK98_RS00785 3614ebdc92830d0a67e69bf5c313b9bb 345 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 RK98_RS00785 3614ebdc92830d0a67e69bf5c313b9bb 345 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 343 46.998 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 RK98_RS00785 3614ebdc92830d0a67e69bf5c313b9bb 345 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 RK98_RS00785 3614ebdc92830d0a67e69bf5c313b9bb 345 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 342 7.3E-121 T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 RK98_RS00785 3614ebdc92830d0a67e69bf5c313b9bb 345 Gene3D G3DSA:3.20.20.210 4 345 4.5E-94 T 28-03-2018 RK98_RS00785 3614ebdc92830d0a67e69bf5c313b9bb 345 SUPERFAMILY SSF51726 2 343 8.37E-102 T 28-03-2018 RK98_RS14490 70e92c5439bdb824b113bd5bc33ece93 117 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 1.3E-23 T 28-03-2018 RK98_RS14490 70e92c5439bdb824b113bd5bc33ece93 117 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 23.274 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RK98_RS14490 70e92c5439bdb824b113bd5bc33ece93 117 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 2.9E-33 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS RK98_RS14490 70e92c5439bdb824b113bd5bc33ece93 117 Gene3D G3DSA:3.30.460.10 1 115 1.2E-30 T 28-03-2018 RK98_RS14490 70e92c5439bdb824b113bd5bc33ece93 117 SUPERFAMILY SSF81301 1 112 4.25E-37 T 28-03-2018 RK98_RS14460 1e43f905110fc6e15644db5e18f4627d 83 Pfam PF01649 Ribosomal protein S20 2 80 2.9E-21 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS14460 1e43f905110fc6e15644db5e18f4627d 83 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 83 12.757 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS14460 1e43f905110fc6e15644db5e18f4627d 83 SUPERFAMILY SSF46992 3 82 1.09E-22 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS14460 1e43f905110fc6e15644db5e18f4627d 83 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 78 2.0E-8 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS14460 1e43f905110fc6e15644db5e18f4627d 83 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 79 2.0E-19 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS14460 1e43f905110fc6e15644db5e18f4627d 83 Gene3D G3DSA:1.20.58.110 1 83 1.4E-21 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS12020 3a18ddc189210de4745830b039945d03 246 Pfam PF00588 SpoU rRNA Methylase family 107 242 3.5E-33 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RK98_RS12020 3a18ddc189210de4745830b039945d03 246 SUPERFAMILY SSF55315 3 99 1.17E-24 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like RK98_RS12020 3a18ddc189210de4745830b039945d03 246 SMART SM00967 31 100 2.2E-12 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 RK98_RS12020 3a18ddc189210de4745830b039945d03 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 99 1.6E-10 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 RK98_RS12020 3a18ddc189210de4745830b039945d03 246 SUPERFAMILY SSF75217 99 244 3.01E-37 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases RK98_RS12020 3a18ddc189210de4745830b039945d03 246 Gene3D G3DSA:3.40.1280.10 99 246 1.3E-37 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK98_RS12020 3a18ddc189210de4745830b039945d03 246 Gene3D G3DSA:3.30.1330.30 1 98 1.1E-19 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like RK98_RS03750 a212653d09582ced31591ec0d9b378bb 198 SMART SM00493 80 165 7.3E-14 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS03750 a212653d09582ced31591ec0d9b378bb 198 Gene3D G3DSA:1.10.150.20 8 38 0.0011 T 28-03-2018 RK98_RS03750 a212653d09582ced31591ec0d9b378bb 198 SMART SM00278 12 31 0.0049 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 RK98_RS03750 a212653d09582ced31591ec0d9b378bb 198 Gene3D G3DSA:3.40.1360.10 77 170 5.9E-39 T 28-03-2018 RK98_RS03750 a212653d09582ced31591ec0d9b378bb 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 109.286 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RK98_RS03750 a212653d09582ced31591ec0d9b378bb 198 Pfam PF13662 Toprim domain 80 171 7.0E-26 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS03750 a212653d09582ced31591ec0d9b378bb 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 2.1E-87 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 RK98_RS03750 a212653d09582ced31591ec0d9b378bb 198 Pfam PF02132 RecR protein 40 78 2.0E-16 T 28-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger RK98_RS03750 a212653d09582ced31591ec0d9b378bb 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 28-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 RK98_RS03750 a212653d09582ced31591ec0d9b378bb 198 SUPERFAMILY SSF111304 1 198 3.92E-78 T 28-03-2018 IPR023627 Recombination protein RecR RK98_RS00780 eb2d1fb5f0ffa880afdbf10c29030de2 307 Hamap MF_00323 Ferrochelatase [hemH]. 3 307 31.977 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RK98_RS00780 eb2d1fb5f0ffa880afdbf10c29030de2 307 TIGRFAM TIGR00109 hemH: ferrochelatase 3 304 1.7E-80 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RK98_RS00780 eb2d1fb5f0ffa880afdbf10c29030de2 307 ProSitePatterns PS00534 Ferrochelatase signature. 176 195 - T 28-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RK98_RS00780 eb2d1fb5f0ffa880afdbf10c29030de2 307 Gene3D G3DSA:3.40.50.1400 1 155 5.3E-27 T 28-03-2018 RK98_RS00780 eb2d1fb5f0ffa880afdbf10c29030de2 307 SUPERFAMILY SSF53800 3 305 5.89E-84 T 28-03-2018 RK98_RS00780 eb2d1fb5f0ffa880afdbf10c29030de2 307 Pfam PF00762 Ferrochelatase 4 304 2.6E-79 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 RK98_RS00780 eb2d1fb5f0ffa880afdbf10c29030de2 307 Gene3D G3DSA:3.40.50.1400 156 288 6.3E-37 T 28-03-2018 RK98_RS02475 46bcf8328ace73435214d12ae11d385e 327 Gene3D G3DSA:3.90.550.10 1 198 1.5E-25 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS02475 46bcf8328ace73435214d12ae11d385e 327 Pfam PF00535 Glycosyl transferase family 2 5 141 2.6E-25 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RK98_RS02475 46bcf8328ace73435214d12ae11d385e 327 SUPERFAMILY SSF53448 1 257 6.0E-31 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS02005 6816da39361c3e2ad5b45e89f91f8be2 75 Pfam PF01381 Helix-turn-helix 12 63 1.2E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS02005 6816da39361c3e2ad5b45e89f91f8be2 75 SUPERFAMILY SSF47413 8 66 8.58E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS02005 6816da39361c3e2ad5b45e89f91f8be2 75 SMART SM00530 8 63 3.5E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS02005 6816da39361c3e2ad5b45e89f91f8be2 75 Gene3D G3DSA:1.10.260.40 8 73 4.8E-11 T 28-03-2018 RK98_RS05780 4c4ac28f1a02b9bf0653d06e9a9867d2 591 SUPERFAMILY SSF51905 28 258 5.4E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS05780 4c4ac28f1a02b9bf0653d06e9a9867d2 591 Pfam PF06100 MCRA family 22 520 1.0E-223 T 28-03-2018 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 RK98_RS05780 4c4ac28f1a02b9bf0653d06e9a9867d2 591 Gene3D G3DSA:3.40.50.720 21 528 2.0E-9 T 28-03-2018 RK98_RS10420 9a415dfc820fc62ec917a18541250023 292 SUPERFAMILY SSF103032 9 292 2.48E-70 T 28-03-2018 IPR015315 Protein of unknown function DUF1963 RK98_RS10420 9a415dfc820fc62ec917a18541250023 292 Pfam PF09234 Domain of unknown function (DUF1963) 51 291 2.0E-48 T 28-03-2018 IPR015315 Protein of unknown function DUF1963 RK98_RS10420 9a415dfc820fc62ec917a18541250023 292 Gene3D G3DSA:2.30.320.10 28 292 1.6E-42 T 28-03-2018 RK98_RS06420 06c21113270f49e0f92e74c0928667be 302 SUPERFAMILY SSF103481 192 289 5.23E-11 T 28-03-2018 RK98_RS06420 06c21113270f49e0f92e74c0928667be 302 TIGRFAM TIGR00688 rarD: protein RarD 6 262 9.4E-63 T 28-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 RK98_RS06420 06c21113270f49e0f92e74c0928667be 302 Pfam PF00892 EamA-like transporter family 7 148 3.0E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 RK98_RS06420 06c21113270f49e0f92e74c0928667be 302 Pfam PF00892 EamA-like transporter family 157 286 3.9E-8 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 RK98_RS06420 06c21113270f49e0f92e74c0928667be 302 SUPERFAMILY SSF103481 45 149 1.31E-8 T 28-03-2018 RK98_RS00535 afde9518893f1aff5f7544afc6df1e99 151 Pfam PF16253 Domain of unknown function (DUF4909) 25 151 4.6E-90 T 28-03-2018 IPR032590 Protein of unknown function DUF4909 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 SUPERFAMILY SSF53822 62 329 2.98E-69 T 28-03-2018 IPR028082 Periplasmic binding protein-like I RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 Gene3D G3DSA:1.10.260.40 3 55 3.8E-22 T 28-03-2018 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 Gene3D G3DSA:3.40.50.2300 56 175 9.4E-33 T 28-03-2018 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 TIGRFAM TIGR01481 ccpA: catabolite control protein A 1 329 3.6E-172 T 28-03-2018 IPR006377 Catabolite control protein A GO:0006355 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.7E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 28-03-2018 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 Pfam PF13377 Periplasmic binding protein-like domain 171 328 8.0E-30 T 28-03-2018 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 SUPERFAMILY SSF47413 2 60 8.8E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 SMART SM00354 2 72 1.5E-37 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 Gene3D G3DSA:3.40.50.2300 176 311 6.0E-31 T 28-03-2018 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.5E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS00240 aa42a3424ad1022af92869c4f0d99e17 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.5E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 SUPERFAMILY SSF50615 11 94 1.43E-29 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 SUPERFAMILY SSF52540 95 370 1.25E-98 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 3.0E-73 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 50.824 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 Gene3D G3DSA:3.40.50.300 83 364 6.7E-120 T 28-03-2018 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 SUPERFAMILY SSF47917 372 499 4.45E-46 T 28-03-2018 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 PIRSF PIRSF039088 1 501 1.7E-245 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 1.8E-252 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 Gene3D G3DSA:2.40.30.20 3 82 1.0E-36 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 494 8.2E-45 T 28-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 Gene3D G3DSA:1.20.150.20 373 498 1.7E-48 T 28-03-2018 RK98_RS09700 9f1a5d48ed558c9a6f10869c37242953 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 4.1E-18 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 RK98_RS08920 f2047892d87dabd8116077bf2e988e24 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 1.1E-71 T 28-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 RK98_RS08920 f2047892d87dabd8116077bf2e988e24 207 Gene3D G3DSA:3.40.1370.10 146 205 1.4E-16 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RK98_RS08920 f2047892d87dabd8116077bf2e988e24 207 Gene3D G3DSA:3.40.1370.10 2 145 1.3E-56 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RK98_RS08920 f2047892d87dabd8116077bf2e988e24 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 36.766 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08920 f2047892d87dabd8116077bf2e988e24 207 SUPERFAMILY SSF52166 1 206 3.53E-82 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 RK98_RS08920 f2047892d87dabd8116077bf2e988e24 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 3.3E-82 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 PRINTS PR00143 Citrate synthase signature 325 339 4.7E-38 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 PRINTS PR00143 Citrate synthase signature 305 321 4.7E-38 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 PRINTS PR00143 Citrate synthase signature 173 188 4.7E-38 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 PRINTS PR00143 Citrate synthase signature 248 268 4.7E-38 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 PRINTS PR00143 Citrate synthase signature 195 223 4.7E-38 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 Gene3D G3DSA:1.10.580.10 1 252 5.0E-82 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 SUPERFAMILY SSF48256 3 366 8.37E-131 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 Gene3D G3DSA:1.10.580.10 297 352 1.8E-10 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 Pfam PF00285 Citrate synthase, C-terminal domain 7 355 1.4E-127 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 ProSitePatterns PS00480 Citrate synthase signature. 255 267 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 PIRSF PIRSF001369 1 373 4.4E-147 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type RK98_RS15050 21c5c43b0c909ce0c1d245da68b43d1a 373 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 6 372 6.1E-148 T 28-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 RK98_RS05090 99be5a4177c79675435110028d094fac 381 SUPERFAMILY SSF46458 1 148 3.2E-39 T 28-03-2018 IPR009050 Globin-like RK98_RS05090 99be5a4177c79675435110028d094fac 381 Pfam PF00175 Oxidoreductase NAD-binding domain 262 352 1.8E-4 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RK98_RS05090 99be5a4177c79675435110028d094fac 381 SUPERFAMILY SSF63380 118 253 5.88E-21 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RK98_RS05090 99be5a4177c79675435110028d094fac 381 SUPERFAMILY SSF52343 254 375 9.43E-25 T 28-03-2018 RK98_RS05090 99be5a4177c79675435110028d094fac 381 Gene3D G3DSA:1.10.490.10 1 156 2.7E-34 T 28-03-2018 RK98_RS05090 99be5a4177c79675435110028d094fac 381 Pfam PF00970 Oxidoreductase FAD-binding domain 152 251 4.4E-9 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 RK98_RS05090 99be5a4177c79675435110028d094fac 381 Gene3D G3DSA:3.40.50.80 253 380 7.4E-18 T 28-03-2018 RK98_RS05090 99be5a4177c79675435110028d094fac 381 Gene3D G3DSA:2.40.30.10 157 252 4.3E-20 T 28-03-2018 RK98_RS05090 99be5a4177c79675435110028d094fac 381 Pfam PF00042 Globin 6 102 4.7E-7 T 28-03-2018 IPR000971 Globin GO:0020037 RK98_RS05090 99be5a4177c79675435110028d094fac 381 PRINTS PR00409 Phthalate dioxygenase reductase family signature 225 239 2.9E-7 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 RK98_RS05090 99be5a4177c79675435110028d094fac 381 PRINTS PR00409 Phthalate dioxygenase reductase family signature 341 349 2.9E-7 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 RK98_RS05090 99be5a4177c79675435110028d094fac 381 PRINTS PR00409 Phthalate dioxygenase reductase family signature 239 253 2.9E-7 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 RK98_RS05090 99be5a4177c79675435110028d094fac 381 PRINTS PR00409 Phthalate dioxygenase reductase family signature 261 280 2.9E-7 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 RK98_RS01485 c7865d25bd50764309afbce64764c34d 246 Pfam PF12679 ABC-2 family transporter protein 40 245 2.9E-9 T 28-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 275 329 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 5 646 0.0 T 28-03-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 Gene3D G3DSA:1.20.210.10 42 557 9.0E-180 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 SUPERFAMILY SSF81442 42 555 1.09E-168 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 319 334 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 364 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 378 396 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 406 425 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 193 211 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 456 477 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 222 241 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 273 294 2.1E-92 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 Gene3D G3DSA:1.10.287.70 570 637 6.9E-11 T 28-03-2018 RK98_RS11610 dc91c5d3aea3e17f790dc624514848ce 662 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 500 4.2E-139 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS02485 4793bcdcad535be8732a68bf0377b72b 449 Pfam PF01595 Domain of unknown function DUF21 10 203 8.1E-50 T 28-03-2018 IPR002550 Domain of unknown function DUF21 RK98_RS02485 4793bcdcad535be8732a68bf0377b72b 449 Gene3D G3DSA:3.10.580.10 197 345 1.9E-31 T 28-03-2018 RK98_RS02485 4793bcdcad535be8732a68bf0377b72b 449 Pfam PF03471 Transporter associated domain 355 428 1.9E-13 T 28-03-2018 IPR005170 Transporter-associated domain RK98_RS02485 4793bcdcad535be8732a68bf0377b72b 449 SUPERFAMILY SSF54631 206 341 1.11E-29 T 28-03-2018 RK98_RS02485 4793bcdcad535be8732a68bf0377b72b 449 SMART SM01091 354 432 1.9E-12 T 28-03-2018 IPR005170 Transporter-associated domain RK98_RS02485 4793bcdcad535be8732a68bf0377b72b 449 SUPERFAMILY SSF56176 352 434 2.54E-13 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RK98_RS02485 4793bcdcad535be8732a68bf0377b72b 449 Pfam PF00571 CBS domain 219 273 1.4E-4 T 28-03-2018 IPR000644 CBS domain RK98_RS02485 4793bcdcad535be8732a68bf0377b72b 449 Pfam PF00571 CBS domain 289 338 8.4E-7 T 28-03-2018 IPR000644 CBS domain RK98_RS02485 4793bcdcad535be8732a68bf0377b72b 449 Gene3D G3DSA:3.30.465.10 346 430 9.3E-16 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RK98_RS07945 88fdcc059c93fe0871131e9fd4c858b8 371 Gene3D G3DSA:3.40.640.10 55 260 8.0E-31 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS07945 88fdcc059c93fe0871131e9fd4c858b8 371 SUPERFAMILY SSF53383 2 369 7.93E-79 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS07945 88fdcc059c93fe0871131e9fd4c858b8 371 Gene3D G3DSA:3.90.1150.10 261 369 1.3E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS07945 88fdcc059c93fe0871131e9fd4c858b8 371 Pfam PF00155 Aminotransferase class I and II 37 365 3.0E-40 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 2.4E-29 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 2.4E-29 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 2.4E-29 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 2.4E-29 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 455 43.264 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 Gene3D G3DSA:1.10.40.30 377 434 5.8E-22 T 28-03-2018 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 Gene3D G3DSA:1.20.200.10 109 376 6.5E-90 T 28-03-2018 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 SUPERFAMILY SSF48557 8 458 1.43E-149 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 Pfam PF00206 Lyase 8 302 1.1E-74 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 2.7E-67 T 28-03-2018 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 2.7E-67 T 28-03-2018 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 2.7E-67 T 28-03-2018 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 2.7E-67 T 28-03-2018 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 2.7E-67 T 28-03-2018 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 2.7E-67 T 28-03-2018 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 Pfam PF14698 Argininosuccinate lyase C-terminal 365 432 1.1E-22 T 28-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 Gene3D G3DSA:1.10.275.10 4 108 5.9E-39 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal RK98_RS11095 75a753bdeae9d58e57cf87ce0023f850 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 6 456 7.9E-199 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS11015 53408fb0ead57d816431d2dda2af7a14 124 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 4 119 2.5E-29 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 RK98_RS11015 53408fb0ead57d816431d2dda2af7a14 124 Pfam PF03061 Thioesterase superfamily 34 111 2.7E-14 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 RK98_RS11015 53408fb0ead57d816431d2dda2af7a14 124 SUPERFAMILY SSF54637 5 122 5.84E-26 T 28-03-2018 IPR029069 HotDog domain RK98_RS11015 53408fb0ead57d816431d2dda2af7a14 124 Gene3D G3DSA:3.10.129.10 2 123 3.7E-21 T 28-03-2018 RK98_RS10030 0a92c233a2db450239fafba7e848e8e6 144 Gene3D G3DSA:3.40.50.300 1 139 3.1E-45 T 28-03-2018 RK98_RS10030 0a92c233a2db450239fafba7e848e8e6 144 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 2 120 6.1E-35 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RK98_RS10030 0a92c233a2db450239fafba7e848e8e6 144 SUPERFAMILY SSF52540 11 134 2.72E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS10030 0a92c233a2db450239fafba7e848e8e6 144 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 1 126 1.8E-37 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 RK98_RS08715 162c54e36ea9343992f1e434bc1924d2 384 Gene3D G3DSA:1.20.140.10 224 382 1.6E-17 T 28-03-2018 RK98_RS08715 162c54e36ea9343992f1e434bc1924d2 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 129 221 4.6E-13 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 RK98_RS08715 162c54e36ea9343992f1e434bc1924d2 384 Gene3D G3DSA:1.10.540.10 3 126 8.6E-10 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 RK98_RS08715 162c54e36ea9343992f1e434bc1924d2 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 26 102 5.3E-6 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 RK98_RS08715 162c54e36ea9343992f1e434bc1924d2 384 SUPERFAMILY SSF47203 238 382 1.22E-22 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 RK98_RS08715 162c54e36ea9343992f1e434bc1924d2 384 PIRSF PIRSF016578 141 383 1.1E-21 T 28-03-2018 RK98_RS08715 162c54e36ea9343992f1e434bc1924d2 384 PIRSF PIRSF016578 3 111 2.5E-7 T 28-03-2018 RK98_RS08715 162c54e36ea9343992f1e434bc1924d2 384 Gene3D G3DSA:2.40.110.10 128 223 2.3E-21 T 28-03-2018 RK98_RS08715 162c54e36ea9343992f1e434bc1924d2 384 SUPERFAMILY SSF56645 23 231 8.51E-42 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RK98_RS08715 162c54e36ea9343992f1e434bc1924d2 384 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 247 362 2.2E-13 T 28-03-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain RK98_RS12635 0f2d68834189119d93a77231f284de6e 372 Pfam PF01476 LysM domain 166 209 2.4E-18 T 28-03-2018 IPR018392 LysM domain RK98_RS12635 0f2d68834189119d93a77231f284de6e 372 Pfam PF05257 CHAP domain 249 340 1.8E-11 T 28-03-2018 IPR007921 CHAP domain RK98_RS12635 0f2d68834189119d93a77231f284de6e 372 Gene3D G3DSA:3.10.350.10 159 226 9.7E-18 T 28-03-2018 RK98_RS12635 0f2d68834189119d93a77231f284de6e 372 Gene3D G3DSA:3.90.1720.10 227 371 1.5E-7 T 28-03-2018 RK98_RS12635 0f2d68834189119d93a77231f284de6e 372 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 1 39 9.1E-11 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS12635 0f2d68834189119d93a77231f284de6e 372 SUPERFAMILY SSF54106 164 209 7.19E-13 T 28-03-2018 IPR018392 LysM domain RK98_RS12635 0f2d68834189119d93a77231f284de6e 372 SUPERFAMILY SSF54001 220 368 3.63E-18 T 28-03-2018 RK98_RS12635 0f2d68834189119d93a77231f284de6e 372 SMART SM00257 165 209 2.7E-19 T 28-03-2018 IPR018392 LysM domain RK98_RS12380 fd41f32d9752a469cb74ef05ad51aef4 305 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS12380 fd41f32d9752a469cb74ef05ad51aef4 305 SMART SM00363 16 80 1.0E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS12380 fd41f32d9752a469cb74ef05ad51aef4 305 SUPERFAMILY SSF55174 14 114 9.57E-16 T 28-03-2018 RK98_RS12380 fd41f32d9752a469cb74ef05ad51aef4 305 Gene3D G3DSA:3.30.2350.10 80 304 1.6E-72 T 28-03-2018 RK98_RS12380 fd41f32d9752a469cb74ef05ad51aef4 305 SUPERFAMILY SSF55120 74 301 6.58E-80 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS12380 fd41f32d9752a469cb74ef05ad51aef4 305 Gene3D G3DSA:3.10.290.10 1 73 5.8E-16 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS12380 fd41f32d9752a469cb74ef05ad51aef4 305 Pfam PF01479 S4 domain 16 62 1.9E-9 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS12380 fd41f32d9752a469cb74ef05ad51aef4 305 Pfam PF00849 RNA pseudouridylate synthase 90 242 2.4E-35 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS12380 fd41f32d9752a469cb74ef05ad51aef4 305 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 300 2.4E-98 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS13635 cd35119229104131950eb1f039fadeef 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 7 144 1.6E-54 T 28-03-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family RK98_RS13635 cd35119229104131950eb1f039fadeef 145 Pfam PF06491 Disulphide isomerase 7 144 2.9E-53 T 28-03-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family RK98_RS05580 c7f74d59305aa4645535fc8c6584d040 318 Gene3D G3DSA:3.40.190.10 44 144 1.0E-10 T 28-03-2018 RK98_RS05580 c7f74d59305aa4645535fc8c6584d040 318 Gene3D G3DSA:3.40.190.10 151 300 5.8E-37 T 28-03-2018 RK98_RS05580 c7f74d59305aa4645535fc8c6584d040 318 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 5 277 7.2E-77 T 28-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 RK98_RS05580 c7f74d59305aa4645535fc8c6584d040 318 SMART SM00062 48 294 5.0E-4 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF RK98_RS05580 c7f74d59305aa4645535fc8c6584d040 318 SUPERFAMILY SSF53850 45 312 6.23E-51 T 28-03-2018 RK98_RS05580 c7f74d59305aa4645535fc8c6584d040 318 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 53 303 9.8E-72 T 28-03-2018 RK98_RS11440 29088a84b8f71e75dd68454489494e70 200 Pfam PF02517 CAAX protease self-immunity 104 189 6.7E-7 T 28-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 RK98_RS13695 c421415b412809e65e53fa7aa82bb6ff 292 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 161 1.4E-51 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 RK98_RS13695 c421415b412809e65e53fa7aa82bb6ff 292 SUPERFAMILY SSF47807 174 261 3.59E-26 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RK98_RS13695 c421415b412809e65e53fa7aa82bb6ff 292 SMART SM00279 176 211 7.2E-15 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 RK98_RS13695 c421415b412809e65e53fa7aa82bb6ff 292 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 175 257 1.2E-26 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 RK98_RS13695 c421415b412809e65e53fa7aa82bb6ff 292 Gene3D G3DSA:1.10.150.20 188 265 6.6E-25 T 28-03-2018 RK98_RS13695 c421415b412809e65e53fa7aa82bb6ff 292 Gene3D G3DSA:3.40.50.1010 3 187 1.1E-60 T 28-03-2018 IPR029060 PIN domain-like RK98_RS13695 c421415b412809e65e53fa7aa82bb6ff 292 SUPERFAMILY SSF88723 3 156 5.4E-49 T 28-03-2018 IPR029060 PIN domain-like RK98_RS13695 c421415b412809e65e53fa7aa82bb6ff 292 SMART SM00475 3 262 5.6E-111 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 RK98_RS08515 9b89e76d7852a38112bafe69740cb502 534 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 1 526 1.2E-291 T 28-03-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 RK98_RS08515 9b89e76d7852a38112bafe69740cb502 534 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 406 512 1.3E-15 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS08515 9b89e76d7852a38112bafe69740cb502 534 Pfam PF02378 Phosphotransferase system, EIIC 9 343 1.1E-65 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS08515 9b89e76d7852a38112bafe69740cb502 534 Pfam PF00367 phosphotransferase system, EIIB 455 485 1.5E-14 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS08515 9b89e76d7852a38112bafe69740cb502 534 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS08515 9b89e76d7852a38112bafe69740cb502 534 SUPERFAMILY SSF55604 452 525 9.42E-18 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS08515 9b89e76d7852a38112bafe69740cb502 534 Gene3D G3DSA:3.30.1360.60 449 526 1.6E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS08220 147d997a61fc8e342591a2755267b305 314 SUPERFAMILY SSF144083 249 311 4.45E-13 T 28-03-2018 RK98_RS08220 147d997a61fc8e342591a2755267b305 314 Gene3D G3DSA:1.20.58.340 130 246 2.8E-10 T 28-03-2018 RK98_RS08220 147d997a61fc8e342591a2755267b305 314 Pfam PF01544 CorA-like Mg2+ transporter protein 23 310 2.2E-58 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 RK98_RS08220 147d997a61fc8e342591a2755267b305 314 Gene3D G3DSA:1.20.58.340 247 314 4.2E-13 T 28-03-2018 RK98_RS08220 147d997a61fc8e342591a2755267b305 314 Gene3D G3DSA:3.30.460.20 3 125 3.3E-18 T 28-03-2018 RK98_RS08220 147d997a61fc8e342591a2755267b305 314 SUPERFAMILY SSF143865 21 248 3.79E-42 T 28-03-2018 RK98_RS11935 bd2aaa75dfacfad669b4806213359de0 84 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 6 75 1.0E-23 T 28-03-2018 IPR016979 Protein of unknown function DUF2129 RK98_RS11935 bd2aaa75dfacfad669b4806213359de0 84 PIRSF PIRSF031653 1 84 1.6E-27 T 28-03-2018 IPR016979 Protein of unknown function DUF2129 RK98_RS11935 bd2aaa75dfacfad669b4806213359de0 84 Hamap MF_01126 UPF0298 protein . 2 79 20.485 T 28-03-2018 IPR016979 Protein of unknown function DUF2129 RK98_RS07930 e09641175835ae9c3c797348955c268d 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 4 164 4.8E-30 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RK98_RS07930 e09641175835ae9c3c797348955c268d 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 194 17.736 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RK98_RS07930 e09641175835ae9c3c797348955c268d 228 SUPERFAMILY SSF52540 1 198 1.81E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07930 e09641175835ae9c3c797348955c268d 228 Gene3D G3DSA:3.40.50.300 1 213 2.6E-33 T 28-03-2018 RK98_RS07930 e09641175835ae9c3c797348955c268d 228 Pfam PF13500 AAA domain 2 175 2.2E-24 T 28-03-2018 RK98_RS07930 e09641175835ae9c3c797348955c268d 228 PIRSF PIRSF006755 1 222 8.6E-36 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 RK98_RS08835 84ff995b331891130280bfa3235cd5af 254 Pfam PF13468 Glyoxalase-like domain 5 191 1.1E-30 T 28-03-2018 IPR025870 Glyoxalase-like domain RK98_RS08835 84ff995b331891130280bfa3235cd5af 254 Gene3D G3DSA:3.10.180.10 1 142 4.5E-5 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS08835 84ff995b331891130280bfa3235cd5af 254 SUPERFAMILY SSF54593 1 153 4.8E-7 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Pfam PF17210 SdrD B-like domain 717 819 2.1E-31 T 28-03-2018 IPR033764 SD-repeat containing protein, B domain RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Pfam PF17210 SdrD B-like domain 604 709 2.9E-21 T 28-03-2018 IPR033764 SD-repeat containing protein, B domain RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Pfam PF04650 YSIRK type signal peptide 18 43 1.2E-11 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Gene3D G3DSA:2.60.40.1280 272 426 3.2E-32 T 28-03-2018 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 SUPERFAMILY SSF49401 419 597 1.49E-45 T 28-03-2018 IPR008966 Adhesion domain RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 SUPERFAMILY SSF117074 595 680 2.35E-14 T 28-03-2018 RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 13 55 7.4E-14 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Pfam PF13620 Carboxypeptidase regulatory-like domain 843 908 6.5E-11 T 28-03-2018 RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Pfam PF00746 LPXTG cell wall anchor motif 1097 1141 3.6E-11 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 SUPERFAMILY SSF117074 804 906 9.15E-23 T 28-03-2018 RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 426 581 2.5E-29 T 28-03-2018 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1104 1138 0.0026 T 28-03-2018 RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 SUPERFAMILY SSF117074 699 795 4.05E-25 T 28-03-2018 RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Gene3D G3DSA:2.60.40.10 601 716 1.1E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Gene3D G3DSA:2.60.40.10 825 1029 2.7E-23 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Gene3D G3DSA:2.60.40.10 717 824 5.2E-27 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 Gene3D G3DSA:2.60.40.1290 427 588 4.0E-41 T 28-03-2018 RK98_RS03210 e217a3375eccc6721917dff0c9abc089 1141 SUPERFAMILY SSF49401 273 418 5.22E-34 T 28-03-2018 IPR008966 Adhesion domain RK98_RS11790 e0b6fc21abddf4d0d91775530b81f83b 370 SUPERFAMILY SSF52518 18 365 4.29E-104 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS11790 e0b6fc21abddf4d0d91775530b81f83b 370 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 23 363 3.2E-147 T 28-03-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 RK98_RS11790 e0b6fc21abddf4d0d91775530b81f83b 370 Pfam PF00676 Dehydrogenase E1 component 53 342 2.5E-103 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 RK98_RS11790 e0b6fc21abddf4d0d91775530b81f83b 370 Gene3D G3DSA:3.40.50.970 3 363 2.9E-88 T 28-03-2018 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 Gene3D G3DSA:3.40.1390.10 2 95 2.8E-24 T 28-03-2018 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 Pfam PF08245 Mur ligase middle domain 111 294 5.8E-45 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 Gene3D G3DSA:3.90.190.20 314 452 3.8E-47 T 28-03-2018 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 Pfam PF01225 Mur ligase family, catalytic domain 25 100 6.9E-13 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 Gene3D G3DSA:3.40.1190.10 96 311 5.3E-56 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 SUPERFAMILY SSF53244 316 450 1.08E-40 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 450 1.9E-136 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 395 2.5E-14 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 34.137 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 SUPERFAMILY SSF63418 1 103 1.96E-23 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 RK98_RS09830 a01d594aa8156998eecd859cc5c8aacf 452 SUPERFAMILY SSF53623 105 312 8.63E-51 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 495 501 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 Gene3D G3DSA:3.40.50.1000 616 752 1.1E-42 T 28-03-2018 IPR023214 HAD-like domain RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 264 777 4.4E-98 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 Gene3D G3DSA:1.20.1110.10 255 507 4.1E-51 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 SUPERFAMILY SSF81653 295 391 6.8E-29 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 Gene3D G3DSA:3.40.1110.10 508 615 1.3E-32 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00943 Copper-transporting ATPase signature 476 491 1.2E-15 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00943 Copper-transporting ATPase signature 117 137 1.2E-15 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00943 Copper-transporting ATPase signature 88 102 1.2E-15 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00943 Copper-transporting ATPase signature 261 280 1.2E-15 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00943 Copper-transporting ATPase signature 665 682 1.2E-15 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00943 Copper-transporting ATPase signature 209 228 1.2E-15 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00943 Copper-transporting ATPase signature 414 428 1.2E-15 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 74 137 1.1E-9 T 28-03-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 6 69 4.9E-9 T 28-03-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 ProSitePatterns PS01047 Heavy-metal-associated domain. 78 107 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 ProSitePatterns PS01047 Heavy-metal-associated domain. 11 39 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 Pfam PF00403 Heavy-metal-associated domain 8 67 2.5E-14 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 Pfam PF00403 Heavy-metal-associated domain 76 136 3.3E-17 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 Pfam PF00122 E1-E2 ATPase 292 472 4.6E-57 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 Gene3D G3DSA:3.30.70.100 73 149 2.9E-25 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 Pfam PF00702 haloacid dehalogenase-like hydrolase 489 702 1.3E-49 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 SUPERFAMILY SSF55008 3 71 5.89E-20 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 SUPERFAMILY SSF81665 259 295 3.01E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 SUPERFAMILY SSF81665 392 487 3.01E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 SUPERFAMILY SSF81665 737 769 3.01E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 205 791 4.3E-188 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 SUPERFAMILY SSF55008 72 143 7.2E-22 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 Gene3D G3DSA:3.30.70.100 3 72 2.9E-21 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 224 790 1.7E-202 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 SUPERFAMILY SSF56784 491 511 4.95E-61 T 28-03-2018 IPR023214 HAD-like domain RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 SUPERFAMILY SSF56784 545 788 4.95E-61 T 28-03-2018 IPR023214 HAD-like domain RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 493 507 2.6E-29 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 711 723 2.6E-29 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 635 645 2.6E-29 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 613 624 2.6E-29 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 341 355 2.6E-29 T 28-03-2018 RK98_RS07180 4e146007cee51b5e6d44e11729e895b5 802 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 688 707 2.6E-29 T 28-03-2018 RK98_RS07470 040d2c7a7b1dc0b33184a269176e876c 452 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 452 5.7E-181 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RK98_RS07470 040d2c7a7b1dc0b33184a269176e876c 452 Gene3D G3DSA:1.10.287.70 5 305 0.036 T 28-03-2018 RK98_RS07470 040d2c7a7b1dc0b33184a269176e876c 452 Pfam PF02447 GntP family permease 6 450 2.2E-171 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RK98_RS07470 040d2c7a7b1dc0b33184a269176e876c 452 PIRSF PIRSF002746 2 452 3.3E-171 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 RK98_RS11540 ed3b92b19c7c24fe02b8328f6e11e7f3 109 Gene3D G3DSA:2.40.310.10 1 107 7.5E-56 T 28-03-2018 IPR014728 Staphostatin A/B GO:0004869|GO:0005737 RK98_RS11540 ed3b92b19c7c24fe02b8328f6e11e7f3 109 SUPERFAMILY SSF50882 1 109 3.92E-63 T 28-03-2018 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 RK98_RS11540 ed3b92b19c7c24fe02b8328f6e11e7f3 109 Pfam PF09023 Staphostatin B 1 107 7.3E-74 T 28-03-2018 IPR015113 Staphostatin B RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 PRINTS PR01898 Bacterial superantigen superfamily signature 158 171 7.8E-13 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 PRINTS PR01898 Bacterial superantigen superfamily signature 115 128 7.8E-13 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 PRINTS PR01898 Bacterial superantigen superfamily signature 211 227 7.8E-13 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 PRINTS PR01898 Bacterial superantigen superfamily signature 171 185 7.8E-13 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 Gene3D G3DSA:2.40.50.110 51 116 8.5E-25 T 28-03-2018 RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 PRINTS PR01800 Staphylococcus aureus exotoxin signature 157 173 1.2E-23 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 1.2E-23 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 PRINTS PR01800 Staphylococcus aureus exotoxin signature 196 211 1.2E-23 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 PRINTS PR01800 Staphylococcus aureus exotoxin signature 117 128 1.2E-23 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 150 213 2.0E-5 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 SUPERFAMILY SSF54334 130 228 1.57E-24 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 42 126 1.5E-30 T 28-03-2018 IPR015282 Staphylococcal superantigen-like OB-fold domain RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 Gene3D G3DSA:3.10.20.120 117 230 4.9E-29 T 28-03-2018 RK98_RS04065 4f42a7cf1a8cebf8cb10170676764580 231 SUPERFAMILY SSF50203 33 128 4.58E-29 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS00230 cce6c9d8bb88c48f0b862714192a16fc 210 PIRSF PIRSF021278 2 210 4.4E-96 T 28-03-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 RK98_RS00230 cce6c9d8bb88c48f0b862714192a16fc 210 Gene3D G3DSA:3.40.630.30 1 210 3.5E-43 T 28-03-2018 RK98_RS00230 cce6c9d8bb88c48f0b862714192a16fc 210 SUPERFAMILY SSF55729 24 123 1.56E-6 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS08765 54f9150c306a2a8a607d008388e3e9d8 168 PIRSF PIRSF006443 1 168 1.6E-61 T 28-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 RK98_RS08765 54f9150c306a2a8a607d008388e3e9d8 168 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 RK98_RS08765 54f9150c306a2a8a607d008388e3e9d8 168 SUPERFAMILY SSF53218 6 166 7.72E-42 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS08765 54f9150c306a2a8a607d008388e3e9d8 168 Pfam PF00994 Probable molybdopterin binding domain 16 161 6.3E-32 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS08765 54f9150c306a2a8a607d008388e3e9d8 168 Gene3D G3DSA:3.40.980.10 3 167 2.9E-35 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS08765 54f9150c306a2a8a607d008388e3e9d8 168 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 13 157 9.6E-37 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS08765 54f9150c306a2a8a607d008388e3e9d8 168 SMART SM00852 16 162 1.3E-26 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS05210 85904c98797ab7c20f4e8a6c5379dfc9 358 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 146 232 2.1E-4 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RK98_RS05210 85904c98797ab7c20f4e8a6c5379dfc9 358 SUPERFAMILY SSF51735 2 183 5.06E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05210 85904c98797ab7c20f4e8a6c5379dfc9 358 SUPERFAMILY SSF55347 131 330 8.5E-24 T 28-03-2018 RK98_RS05210 85904c98797ab7c20f4e8a6c5379dfc9 358 Gene3D G3DSA:3.30.360.10 139 356 1.7E-43 T 28-03-2018 RK98_RS05210 85904c98797ab7c20f4e8a6c5379dfc9 358 Gene3D G3DSA:3.40.50.720 1 138 6.4E-42 T 28-03-2018 RK98_RS05210 85904c98797ab7c20f4e8a6c5379dfc9 358 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 3.4E-29 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 RK98_RS01435 3fd429e1f2a387d45b8e2a0196973306 459 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 209 216 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RK98_RS01435 3fd429e1f2a387d45b8e2a0196973306 459 Gene3D G3DSA:3.40.605.10 3 228 4.1E-64 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RK98_RS01435 3fd429e1f2a387d45b8e2a0196973306 459 PIRSF PIRSF036492 1 459 9.8E-190 T 28-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 RK98_RS01435 3fd429e1f2a387d45b8e2a0196973306 459 Pfam PF00171 Aldehyde dehydrogenase family 13 429 5.1E-95 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RK98_RS01435 3fd429e1f2a387d45b8e2a0196973306 459 SUPERFAMILY SSF53720 11 438 1.24E-126 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RK98_RS01435 3fd429e1f2a387d45b8e2a0196973306 459 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 237 248 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RK98_RS01435 3fd429e1f2a387d45b8e2a0196973306 459 Gene3D G3DSA:3.40.309.10 229 410 9.5E-71 T 28-03-2018 RK98_RS06380 2b443b34b19e0f6105ee9b16d7752919 66 SMART SM00357 3 66 2.8E-27 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 RK98_RS06380 2b443b34b19e0f6105ee9b16d7752919 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.9E-29 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS06380 2b443b34b19e0f6105ee9b16d7752919 66 Gene3D G3DSA:2.40.50.140 1 66 5.9E-27 T 28-03-2018 RK98_RS06380 2b443b34b19e0f6105ee9b16d7752919 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 28-03-2018 IPR019844 Cold-shock conserved site RK98_RS06380 2b443b34b19e0f6105ee9b16d7752919 66 PRINTS PR00050 Cold shock protein signature 24 33 1.7E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS06380 2b443b34b19e0f6105ee9b16d7752919 66 PRINTS PR00050 Cold shock protein signature 4 19 1.7E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS06380 2b443b34b19e0f6105ee9b16d7752919 66 PRINTS PR00050 Cold shock protein signature 39 57 1.7E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS06380 2b443b34b19e0f6105ee9b16d7752919 66 PIRSF PIRSF002599 1 66 8.7E-24 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 RK98_RS06380 2b443b34b19e0f6105ee9b16d7752919 66 SUPERFAMILY SSF50249 1 65 3.7E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS07940 381b9c0e2cca99c9f6835282aa350192 335 SMART SM00729 51 259 1.3E-33 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RK98_RS07940 381b9c0e2cca99c9f6835282aa350192 335 TIGRFAM TIGR00433 bioB: biotin synthase 26 316 9.8E-114 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RK98_RS07940 381b9c0e2cca99c9f6835282aa350192 335 PIRSF PIRSF001619 1 324 2.4E-119 T 28-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RK98_RS07940 381b9c0e2cca99c9f6835282aa350192 335 Gene3D G3DSA:3.20.20.70 10 320 3.8E-46 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS07940 381b9c0e2cca99c9f6835282aa350192 335 SMART SM00876 227 317 2.2E-34 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RK98_RS07940 381b9c0e2cca99c9f6835282aa350192 335 Hamap MF_01694 Biotin synthase [bioB]. 11 318 39.036 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RK98_RS07940 381b9c0e2cca99c9f6835282aa350192 335 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 227 316 2.8E-15 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 RK98_RS07940 381b9c0e2cca99c9f6835282aa350192 335 Pfam PF04055 Radical SAM superfamily 60 215 8.8E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS07940 381b9c0e2cca99c9f6835282aa350192 335 SUPERFAMILY SSF102114 10 317 3.14E-69 T 28-03-2018 RK98_RS07285 da293b2babf3d08f438e74c07674710e 136 Pfam PF13279 Thioesterase-like superfamily 19 131 5.7E-11 T 28-03-2018 RK98_RS07285 da293b2babf3d08f438e74c07674710e 136 SUPERFAMILY SSF54637 10 134 1.65E-23 T 28-03-2018 IPR029069 HotDog domain RK98_RS07285 da293b2babf3d08f438e74c07674710e 136 Gene3D G3DSA:3.10.129.10 8 135 4.0E-17 T 28-03-2018 RK98_RS12270 bb93a63e6c18b38ed8905a309da114d8 146 Gene3D G3DSA:3.40.630.30 1 146 1.3E-14 T 28-03-2018 RK98_RS12270 bb93a63e6c18b38ed8905a309da114d8 146 Hamap MF_00824 Uncharacterized N-acetyltransferase . 1 146 41.317 T 28-03-2018 IPR017274 Putative N-acetyltransferase YlbP RK98_RS12270 bb93a63e6c18b38ed8905a309da114d8 146 SUPERFAMILY SSF55729 40 135 2.9E-9 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS12270 bb93a63e6c18b38ed8905a309da114d8 146 PIRSF PIRSF037732 1 146 8.2E-47 T 28-03-2018 IPR017274 Putative N-acetyltransferase YlbP RK98_RS13300 7084618beaa1b985e4a3f8da50dffcdc 363 Pfam PF02153 Prephenate dehydrogenase 16 274 8.7E-70 T 28-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 RK98_RS13300 7084618beaa1b985e4a3f8da50dffcdc 363 Gene3D G3DSA:1.10.3660.10 182 291 1.4E-27 T 28-03-2018 RK98_RS13300 7084618beaa1b985e4a3f8da50dffcdc 363 SUPERFAMILY SSF48179 174 282 2.04E-33 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS13300 7084618beaa1b985e4a3f8da50dffcdc 363 Gene3D G3DSA:3.30.70.260 292 362 2.1E-4 T 28-03-2018 RK98_RS13300 7084618beaa1b985e4a3f8da50dffcdc 363 SUPERFAMILY SSF51735 4 166 3.28E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS13300 7084618beaa1b985e4a3f8da50dffcdc 363 SUPERFAMILY SSF55021 294 358 5.0E-5 T 28-03-2018 RK98_RS13300 7084618beaa1b985e4a3f8da50dffcdc 363 Gene3D G3DSA:3.40.50.720 1 172 9.3E-19 T 28-03-2018 RK98_RS04270 481bd82ee2afe9c5c682364c08148fee 422 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 325 345 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RK98_RS04270 481bd82ee2afe9c5c682364c08148fee 422 Pfam PF00860 Permease family 2 378 1.6E-104 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RK98_RS04270 481bd82ee2afe9c5c682364c08148fee 422 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 2 407 1.7E-123 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 RK98_RS04270 481bd82ee2afe9c5c682364c08148fee 422 TIGRFAM TIGR03173 pbuX: xanthine permease 7 410 1.2E-152 T 28-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 25 42 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 SUPERFAMILY SSF54373 249 344 5.89E-12 T 28-03-2018 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 Pfam PF01266 FAD dependent oxidoreductase 21 352 1.3E-56 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 43 3.7E-30 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 32 3.7E-30 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 368 380 3.7E-30 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 94 106 3.7E-30 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 338 344 3.7E-30 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 49 61 3.7E-30 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 373 383 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 SUPERFAMILY SSF51905 8 122 1.56E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 SUPERFAMILY SSF51905 157 238 1.56E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 405 531 2.3E-23 T 28-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 RK98_RS12920 139dbe489d20f9a7289c49ef483e52ec 557 Gene3D G3DSA:3.50.50.60 4 419 3.1E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS04320 a6d6874896e2d813a0c81189dd8340bb 189 Pfam PF00578 AhpC/TSA family 13 135 1.1E-34 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RK98_RS04320 a6d6874896e2d813a0c81189dd8340bb 189 Gene3D G3DSA:3.40.30.10 6 156 9.5E-33 T 28-03-2018 RK98_RS04320 a6d6874896e2d813a0c81189dd8340bb 189 SUPERFAMILY SSF52833 3 188 5.95E-52 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS04320 a6d6874896e2d813a0c81189dd8340bb 189 PIRSF PIRSF000239 1 189 5.3E-49 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RK98_RS04320 a6d6874896e2d813a0c81189dd8340bb 189 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 189 3.9E-97 T 28-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RK98_RS04320 a6d6874896e2d813a0c81189dd8340bb 189 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 179 2.7E-5 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RK98_RS04320 a6d6874896e2d813a0c81189dd8340bb 189 Gene3D G3DSA:3.30.1020.10 157 184 1.3E-6 T 28-03-2018 RK98_RS08150 933eeef8bbfe30ad5ed8a3310d707a7b 246 Gene3D G3DSA:1.10.1660.10 2 59 7.1E-18 T 28-03-2018 RK98_RS08150 933eeef8bbfe30ad5ed8a3310d707a7b 246 Pfam PF13411 MerR HTH family regulatory protein 5 71 2.4E-16 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS08150 933eeef8bbfe30ad5ed8a3310d707a7b 246 Gene3D G3DSA:1.10.490.50 148 239 1.5E-8 T 28-03-2018 RK98_RS08150 933eeef8bbfe30ad5ed8a3310d707a7b 246 SUPERFAMILY SSF46955 5 104 1.43E-24 T 28-03-2018 IPR009061 Putative DNA-binding domain RK98_RS08150 933eeef8bbfe30ad5ed8a3310d707a7b 246 SMART SM00422 5 73 5.7E-15 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS08150 933eeef8bbfe30ad5ed8a3310d707a7b 246 SUPERFAMILY SSF89082 153 237 7.45E-11 T 28-03-2018 IPR012925 TipAS antibiotic-recognition domain RK98_RS08150 933eeef8bbfe30ad5ed8a3310d707a7b 246 Gene3D G3DSA:1.10.1660.10 60 132 1.7E-7 T 28-03-2018 RK98_RS08150 933eeef8bbfe30ad5ed8a3310d707a7b 246 Pfam PF07739 TipAS antibiotic-recognition domain 125 236 2.4E-14 T 28-03-2018 IPR012925 TipAS antibiotic-recognition domain RK98_RS04400 bb796b1c9c620fb2b787f203cde19204 98 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 96 22.848 T 28-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 RK98_RS04400 bb796b1c9c620fb2b787f203cde19204 98 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 28-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 RK98_RS04400 bb796b1c9c620fb2b787f203cde19204 98 SUPERFAMILY SSF54995 1 96 4.58E-32 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04400 bb796b1c9c620fb2b787f203cde19204 98 Pfam PF01250 Ribosomal protein S6 4 93 1.0E-25 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04400 bb796b1c9c620fb2b787f203cde19204 98 Gene3D G3DSA:3.30.70.60 1 98 1.6E-28 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 RK98_RS04400 bb796b1c9c620fb2b787f203cde19204 98 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 95 2.1E-30 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12265 acd193ef2919ca93c09914d4f6dedbb4 231 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 202 1.4E-21 T 28-03-2018 IPR023214 HAD-like domain RK98_RS12265 acd193ef2919ca93c09914d4f6dedbb4 231 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 197 2.5E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RK98_RS12265 acd193ef2919ca93c09914d4f6dedbb4 231 SUPERFAMILY SSF56784 6 230 3.16E-41 T 28-03-2018 IPR023214 HAD-like domain RK98_RS12265 acd193ef2919ca93c09914d4f6dedbb4 231 Gene3D G3DSA:1.10.150.240 19 94 1.9E-13 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 RK98_RS12265 acd193ef2919ca93c09914d4f6dedbb4 231 Gene3D G3DSA:3.40.50.1000 95 231 8.0E-24 T 28-03-2018 IPR023214 HAD-like domain RK98_RS12265 acd193ef2919ca93c09914d4f6dedbb4 231 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 6 229 8.5E-60 T 28-03-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 Gene3D G3DSA:1.20.58.410 572 642 4.8E-6 T 28-03-2018 RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 Pfam PF12848 ABC transporter 237 320 8.7E-22 T 28-03-2018 IPR032781 ABC-transporter extension domain RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 SMART SM00382 28 249 4.9E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 SMART SM00382 354 520 1.4E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 SUPERFAMILY SSF52540 318 534 6.58E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 Pfam PF16326 ABC transporter C-terminal domain 571 639 1.6E-12 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 ProSitePatterns PS00211 ABC transporters family signature. 447 461 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 Pfam PF00005 ABC transporter 346 475 1.6E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 Pfam PF00005 ABC transporter 20 195 5.3E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 SUPERFAMILY SSF52540 4 250 1.08E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 Gene3D G3DSA:3.40.50.300 292 558 1.1E-50 T 28-03-2018 RK98_RS10060 7d5cac005cc1c9c24fb1d37df82539b9 642 Gene3D G3DSA:3.40.50.300 2 276 6.4E-57 T 28-03-2018 RK98_RS05180 571d0505b1fc8555524309b2f7a267c4 518 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 410 510 2.6E-5 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS05180 571d0505b1fc8555524309b2f7a267c4 518 Gene3D G3DSA:3.30.565.10 275 512 1.7E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS05180 571d0505b1fc8555524309b2f7a267c4 518 SUPERFAMILY SSF55874 375 511 2.23E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS05180 571d0505b1fc8555524309b2f7a267c4 518 Pfam PF06580 Histidine kinase 314 389 2.4E-21 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 RK98_RS05180 571d0505b1fc8555524309b2f7a267c4 518 Gene3D G3DSA:1.20.5.110 42 244 0.11 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 Pfam PF00575 S1 RNA binding domain 277 348 6.1E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 Pfam PF00575 S1 RNA binding domain 14 78 4.3E-14 T 28-03-2018 IPR003029 S1 domain GO:0003676 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 Pfam PF00575 S1 RNA binding domain 107 173 3.7E-14 T 28-03-2018 IPR003029 S1 domain GO:0003676 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 Pfam PF00575 S1 RNA binding domain 191 262 2.8E-24 T 28-03-2018 IPR003029 S1 domain GO:0003676 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 PRINTS PR00681 Ribosomal protein S1 signature 214 235 5.1E-42 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 PRINTS PR00681 Ribosomal protein S1 signature 128 145 5.1E-42 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 PRINTS PR00681 Ribosomal protein S1 signature 331 349 5.1E-42 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 PRINTS PR00681 Ribosomal protein S1 signature 292 311 5.1E-42 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 PRINTS PR00681 Ribosomal protein S1 signature 157 177 5.1E-42 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 PRINTS PR00681 Ribosomal protein S1 signature 16 34 5.1E-42 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 PRINTS PR00681 Ribosomal protein S1 signature 111 127 5.1E-42 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 SMART SM00316 106 173 5.1E-11 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 SMART SM00316 277 348 2.1E-23 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 SMART SM00316 14 90 5.2E-17 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 SMART SM00316 192 262 9.6E-25 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 Gene3D G3DSA:2.40.50.140 279 377 1.3E-23 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 SUPERFAMILY SSF50249 192 278 3.88E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 SUPERFAMILY SSF50249 257 356 2.72E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 SUPERFAMILY SSF50249 107 186 8.21E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 Gene3D G3DSA:2.40.50.140 6 96 6.6E-19 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 Gene3D G3DSA:2.40.50.140 184 267 3.0E-25 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 Gene3D G3DSA:2.40.50.140 97 179 2.7E-15 T 28-03-2018 RK98_RS13885 b33c78ad76be526f129de6dc1eb96f8d 391 SUPERFAMILY SSF50249 10 116 9.53E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS14500 3a0f7a62b04afee65651bef311c9c15e 189 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 188 28.319 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 RK98_RS14500 3a0f7a62b04afee65651bef311c9c15e 189 SUPERFAMILY SSF52374 1 188 3.44E-47 T 28-03-2018 RK98_RS14500 3a0f7a62b04afee65651bef311c9c15e 189 Gene3D G3DSA:3.40.50.620 1 189 7.3E-48 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS14500 3a0f7a62b04afee65651bef311c9c15e 189 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 187 4.6E-61 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 RK98_RS14500 3a0f7a62b04afee65651bef311c9c15e 189 Pfam PF01467 Cytidylyltransferase-like 6 162 5.3E-30 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RK98_RS13090 dace3ff2f83dbe7bb208da6f2b32553f 353 PIRSF PIRSF038945 1 350 5.7E-161 T 28-03-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 RK98_RS13090 dace3ff2f83dbe7bb208da6f2b32553f 353 Gene3D G3DSA:3.40.50.1100 1 118 7.1E-23 T 28-03-2018 RK98_RS13090 dace3ff2f83dbe7bb208da6f2b32553f 353 Gene3D G3DSA:3.40.50.1100 119 351 1.2E-53 T 28-03-2018 RK98_RS13090 dace3ff2f83dbe7bb208da6f2b32553f 353 TIGRFAM TIGR00260 thrC: threonine synthase 10 325 7.1E-106 T 28-03-2018 IPR004450 Threonine synthase-like RK98_RS13090 dace3ff2f83dbe7bb208da6f2b32553f 353 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 52 65 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RK98_RS13090 dace3ff2f83dbe7bb208da6f2b32553f 353 SUPERFAMILY SSF53686 9 351 5.11E-107 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS13090 dace3ff2f83dbe7bb208da6f2b32553f 353 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 318 3.8E-78 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS13675 49275312b981022f4ab2e4356027651a 463 Gene3D G3DSA:1.20.1250.20 260 463 2.8E-22 T 28-03-2018 RK98_RS13675 49275312b981022f4ab2e4356027651a 463 Gene3D G3DSA:1.20.1250.20 11 201 5.3E-27 T 28-03-2018 RK98_RS13675 49275312b981022f4ab2e4356027651a 463 SUPERFAMILY SSF103473 13 203 1.96E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS13675 49275312b981022f4ab2e4356027651a 463 SUPERFAMILY SSF103473 251 459 1.96E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS13675 49275312b981022f4ab2e4356027651a 463 Pfam PF07690 Major Facilitator Superfamily 20 412 1.3E-43 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS12860 db40c9d8191351034eddbc2970acbec6 265 Gene3D G3DSA:3.60.21.10 1 264 1.1E-49 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS12860 db40c9d8191351034eddbc2970acbec6 265 Pfam PF13277 YmdB-like protein 4 254 1.1E-107 T 28-03-2018 IPR005235 Metallophosphoesterase, YmdB-like RK98_RS12860 db40c9d8191351034eddbc2970acbec6 265 SUPERFAMILY SSF56300 1 255 1.52E-82 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS12860 db40c9d8191351034eddbc2970acbec6 265 PIRSF PIRSF004789 1 263 7.3E-104 T 28-03-2018 IPR005235 Metallophosphoesterase, YmdB-like RK98_RS12860 db40c9d8191351034eddbc2970acbec6 265 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 262 7.6E-106 T 28-03-2018 IPR005235 Metallophosphoesterase, YmdB-like RK98_RS09640 eda7bf8b84588eefe118c43d2809a054 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 RK98_RS09640 eda7bf8b84588eefe118c43d2809a054 278 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 274 2.3E-77 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RK98_RS09640 eda7bf8b84588eefe118c43d2809a054 278 Gene3D G3DSA:3.40.50.150 81 278 7.3E-35 T 28-03-2018 RK98_RS09640 eda7bf8b84588eefe118c43d2809a054 278 Pfam PF05175 Methyltransferase small domain 99 192 1.7E-15 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 RK98_RS09640 eda7bf8b84588eefe118c43d2809a054 278 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 2 278 40.673 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 RK98_RS09640 eda7bf8b84588eefe118c43d2809a054 278 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 275 1.3E-61 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 RK98_RS09640 eda7bf8b84588eefe118c43d2809a054 278 SUPERFAMILY SSF53335 9 254 2.64E-42 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS09640 eda7bf8b84588eefe118c43d2809a054 278 Gene3D G3DSA:1.10.8.10 2 80 1.4E-13 T 28-03-2018 RK98_RS11885 c8f453e5f6f0f483c2586e3ac4c8ef7c 91 Gene3D G3DSA:1.10.287.750 6 88 1.7E-38 T 28-03-2018 RK98_RS11885 c8f453e5f6f0f483c2586e3ac4c8ef7c 91 Hamap MF_01560 UPF0358 protein . 1 91 25.308 T 28-03-2018 IPR009983 Uncharacterised protein family UPF0358 RK98_RS11885 c8f453e5f6f0f483c2586e3ac4c8ef7c 91 SUPERFAMILY SSF140404 4 82 3.79E-34 T 28-03-2018 IPR009983 Uncharacterised protein family UPF0358 RK98_RS11885 c8f453e5f6f0f483c2586e3ac4c8ef7c 91 Pfam PF07408 Protein of unknown function (DUF1507) 8 88 1.7E-36 T 28-03-2018 IPR009983 Uncharacterised protein family UPF0358 RK98_RS09585 4ce5c1350842ab8ddf2480712619a0f3 536 TIGRFAM TIGR00337 PyrG: CTP synthase 1 528 1.0E-256 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RK98_RS09585 4ce5c1350842ab8ddf2480712619a0f3 536 SUPERFAMILY SSF52317 291 534 7.69E-85 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS09585 4ce5c1350842ab8ddf2480712619a0f3 536 Gene3D G3DSA:3.40.50.300 1 287 8.9E-132 T 28-03-2018 RK98_RS09585 4ce5c1350842ab8ddf2480712619a0f3 536 Gene3D G3DSA:3.40.50.880 288 536 3.7E-75 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS09585 4ce5c1350842ab8ddf2480712619a0f3 536 SUPERFAMILY SSF52540 1 269 2.26E-124 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09585 4ce5c1350842ab8ddf2480712619a0f3 536 Pfam PF06418 CTP synthase N-terminus 3 267 8.9E-128 T 28-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RK98_RS09585 4ce5c1350842ab8ddf2480712619a0f3 536 Hamap MF_01227 CTP synthase [pyrG]. 2 533 53.024 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 RK98_RS09585 4ce5c1350842ab8ddf2480712619a0f3 536 Pfam PF00117 Glutamine amidotransferase class-I 303 528 8.4E-56 T 28-03-2018 IPR017926 Glutamine amidotransferase RK98_RS03020 25fa785978bdc54d8726ea54e63b830f 210 TIGRFAM TIGR01218 Gpos_tandem_5TM: tandem five-TM protein 7 206 2.6E-52 T 28-03-2018 IPR005915 Tandem five-TM protein RK98_RS03020 25fa785978bdc54d8726ea54e63b830f 210 Pfam PF04276 Protein of unknown function (DUF443) 11 205 5.1E-54 T 28-03-2018 IPR005915 Tandem five-TM protein RK98_RS09070 1c9ed6bedf19d64229fd13858e7993ff 267 SUPERFAMILY SSF55120 1 248 1.44E-81 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS09070 1c9ed6bedf19d64229fd13858e7993ff 267 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 34.269 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS09070 1c9ed6bedf19d64229fd13858e7993ff 267 Pfam PF01416 tRNA pseudouridine synthase 142 241 5.8E-28 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS09070 1c9ed6bedf19d64229fd13858e7993ff 267 Pfam PF01416 tRNA pseudouridine synthase 8 103 1.4E-9 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS09070 1c9ed6bedf19d64229fd13858e7993ff 267 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 4.2E-66 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS09070 1c9ed6bedf19d64229fd13858e7993ff 267 Gene3D G3DSA:3.30.70.660 105 242 4.3E-37 T 28-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS09070 1c9ed6bedf19d64229fd13858e7993ff 267 Gene3D G3DSA:3.30.70.580 1 104 1.0E-29 T 28-03-2018 RK98_RS09070 1c9ed6bedf19d64229fd13858e7993ff 267 PIRSF PIRSF001430 1 259 2.2E-77 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 Pfam PF00347 Ribosomal protein L6 11 82 3.1E-22 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 Pfam PF00347 Ribosomal protein L6 90 164 4.0E-20 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 Gene3D G3DSA:3.90.930.12 2 82 1.8E-30 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 3.0E-34 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 3.0E-34 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 3.0E-34 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 SUPERFAMILY SSF56053 1 82 9.42E-28 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.1E-74 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 37.43 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 PIRSF PIRSF002162 1 177 3.7E-50 T 28-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 SUPERFAMILY SSF56053 83 177 1.7E-35 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 Gene3D G3DSA:3.90.930.12 83 178 9.6E-39 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08990 8bdcb2372f95afa8a22ab0b0339a29a1 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 28-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS10465 75ebc13804abb0beb900488070e69328 253 SUPERFAMILY SSF52540 4 232 3.43E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS10465 75ebc13804abb0beb900488070e69328 253 Pfam PF00005 ABC transporter 20 172 5.2E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS10465 75ebc13804abb0beb900488070e69328 253 Gene3D G3DSA:3.40.50.300 2 252 6.6E-44 T 28-03-2018 RK98_RS10465 75ebc13804abb0beb900488070e69328 253 SMART SM00382 29 224 6.0E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS10465 75ebc13804abb0beb900488070e69328 253 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 5 245 2.3E-111 T 28-03-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 RK98_RS10465 75ebc13804abb0beb900488070e69328 253 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS12660 e3d169ba3eb4542fddf21befc4b50b53 298 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 6 294 7.3E-106 T 28-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 RK98_RS12660 e3d169ba3eb4542fddf21befc4b50b53 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 6 83 3.6E-17 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RK98_RS12660 e3d169ba3eb4542fddf21befc4b50b53 298 Gene3D G3DSA:1.10.443.10 109 286 7.4E-47 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS12660 e3d169ba3eb4542fddf21befc4b50b53 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 292 52.41 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD RK98_RS12660 e3d169ba3eb4542fddf21befc4b50b53 298 Pfam PF00589 Phage integrase family 109 278 3.1E-45 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS12660 e3d169ba3eb4542fddf21befc4b50b53 298 Gene3D G3DSA:1.10.150.130 1 108 1.6E-21 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS12660 e3d169ba3eb4542fddf21befc4b50b53 298 SUPERFAMILY SSF56349 5 285 1.44E-52 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS07760 f218c427d577f239382cfaa8243af282 395 Gene3D G3DSA:1.20.1250.20 199 389 4.5E-20 T 28-03-2018 RK98_RS07760 f218c427d577f239382cfaa8243af282 395 Gene3D G3DSA:1.20.1250.20 1 193 1.1E-28 T 28-03-2018 RK98_RS07760 f218c427d577f239382cfaa8243af282 395 Pfam PF07690 Major Facilitator Superfamily 10 336 5.1E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS07760 f218c427d577f239382cfaa8243af282 395 SUPERFAMILY SSF103473 5 388 2.35E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS00505 5dcba57ccd05b3470ea9a08644db24a2 530 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 14 530 56.883 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 RK98_RS00505 5dcba57ccd05b3470ea9a08644db24a2 530 SUPERFAMILY SSF68923 15 215 1.57E-77 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RK98_RS00505 5dcba57ccd05b3470ea9a08644db24a2 530 PIRSF PIRSF006294 2 529 4.5E-247 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 RK98_RS00505 5dcba57ccd05b3470ea9a08644db24a2 530 SUPERFAMILY SSF53795 216 517 9.61E-134 T 28-03-2018 RK98_RS00505 5dcba57ccd05b3470ea9a08644db24a2 530 Pfam PF01293 Phosphoenolpyruvate carboxykinase 22 482 3.8E-221 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 RK98_RS00505 5dcba57ccd05b3470ea9a08644db24a2 530 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 253 268 - T 28-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 RK98_RS00505 5dcba57ccd05b3470ea9a08644db24a2 530 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 22 521 6.3E-239 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 RK98_RS00505 5dcba57ccd05b3470ea9a08644db24a2 530 Gene3D G3DSA:3.90.228.20 296 526 1.5E-95 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RK98_RS00505 5dcba57ccd05b3470ea9a08644db24a2 530 Gene3D G3DSA:3.90.228.20 216 295 8.2E-31 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RK98_RS00505 5dcba57ccd05b3470ea9a08644db24a2 530 Gene3D G3DSA:3.40.449.10 22 214 5.4E-78 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 RK98_RS08635 1a0694846eb6deff11562437bd7fcbff 466 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 4 459 9.6E-131 T 28-03-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 RK98_RS08635 1a0694846eb6deff11562437bd7fcbff 466 Pfam PF03553 Na+/H+ antiporter family 158 455 1.1E-68 T 28-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 RK98_RS04520 6d425589c2bbc4f9ebb0e53ac335f91f 284 Pfam PF09375 Imelysin 44 279 1.3E-36 T 28-03-2018 IPR018976 Peptidase M75, Imelysin RK98_RS04445 129c2e026e5bf01ab61713ec914aa4f2 386 PIRSF PIRSF001434 5 375 5.5E-125 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RK98_RS04445 129c2e026e5bf01ab61713ec914aa4f2 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 18 373 2.8E-125 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RK98_RS04445 129c2e026e5bf01ab61713ec914aa4f2 386 Gene3D G3DSA:3.40.640.10 4 245 8.8E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS04445 129c2e026e5bf01ab61713ec914aa4f2 386 Gene3D G3DSA:3.90.1150.10 248 383 3.5E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS04445 129c2e026e5bf01ab61713ec914aa4f2 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RK98_RS04445 129c2e026e5bf01ab61713ec914aa4f2 386 SUPERFAMILY SSF53383 22 374 2.92E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS02310 4d0902e2b04d0b73d9d1bafcf92b53ea 323 Gene3D G3DSA:1.10.620.20 2 293 8.2E-64 T 28-03-2018 RK98_RS02310 4d0902e2b04d0b73d9d1bafcf92b53ea 323 Pfam PF00268 Ribonucleotide reductase, small chain 5 280 4.1E-65 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 RK98_RS02310 4d0902e2b04d0b73d9d1bafcf92b53ea 323 SUPERFAMILY SSF47240 4 319 2.43E-76 T 28-03-2018 IPR009078 Ferritin-like superfamily RK98_RS02310 4d0902e2b04d0b73d9d1bafcf92b53ea 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 2 320 5.3E-124 T 28-03-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 RK98_RS00635 131c84022b20aab4683ef3ff13c624a7 193 Pfam PF16229 Domain of unknown function (DUF4888) 47 192 4.7E-39 T 28-03-2018 IPR032614 Protein of unknown function DUF4888 RK98_RS10090 257e1b0a1b887f8afe51f2d308825df5 494 SMART SM00640 38 454 2.1E-150 T 28-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 RK98_RS10090 257e1b0a1b887f8afe51f2d308825df5 494 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 38 51 - T 28-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 RK98_RS10090 257e1b0a1b887f8afe51f2d308825df5 494 Gene3D G3DSA:2.60.120.560 355 484 3.7E-27 T 28-03-2018 RK98_RS10090 257e1b0a1b887f8afe51f2d308825df5 494 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 342 485 4.7E-23 T 28-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal RK98_RS10090 257e1b0a1b887f8afe51f2d308825df5 494 Gene3D G3DSA:2.115.10.20 43 354 3.1E-94 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RK98_RS10090 257e1b0a1b887f8afe51f2d308825df5 494 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 22 464 3.3E-184 T 28-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 RK98_RS10090 257e1b0a1b887f8afe51f2d308825df5 494 SUPERFAMILY SSF49899 340 490 8.7E-29 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain RK98_RS10090 257e1b0a1b887f8afe51f2d308825df5 494 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 38 338 4.3E-98 T 28-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal RK98_RS10090 257e1b0a1b887f8afe51f2d308825df5 494 SUPERFAMILY SSF75005 29 338 4.24E-105 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain RK98_RS11050 408094b8ddd6ae7ae0c16d3c65486f15 142 TIGRFAM TIGR00943 2a6301s02: monovalent cation:proton antiporter 28 134 4.8E-48 T 28-03-2018 IPR005281 Monovalent cation:proton antiporter, subunit B GO:0006812|GO:0008324|GO:0016021 RK98_RS11050 408094b8ddd6ae7ae0c16d3c65486f15 142 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 9 133 7.9E-29 T 28-03-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RK98_RS09145 f3409d503f3acbe6db9c7acaef3466c1 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 234 4.8E-52 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RK98_RS09145 f3409d503f3acbe6db9c7acaef3466c1 271 SUPERFAMILY SSF56784 1 265 4.7E-26 T 28-03-2018 IPR023214 HAD-like domain RK98_RS09145 f3409d503f3acbe6db9c7acaef3466c1 271 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 3 244 2.5E-15 T 28-03-2018 IPR006380 Sucrose-phosphatase-like, N-terminal RK98_RS09145 f3409d503f3acbe6db9c7acaef3466c1 271 Gene3D G3DSA:3.30.70.1410 106 189 8.9E-26 T 28-03-2018 RK98_RS03975 a37d11796d8e5e8d5b7641e9aec104a9 261 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 254 1.6E-115 T 28-03-2018 IPR007595 Csa1 family RK98_RS03975 a37d11796d8e5e8d5b7641e9aec104a9 261 Pfam PF04507 Csa1 family 1 255 2.6E-111 T 28-03-2018 IPR007595 Csa1 family RK98_RS09050 33a563212145459379c48a6958b55784 122 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09050 33a563212145459379c48a6958b55784 122 SUPERFAMILY SSF64263 2 122 1.12E-41 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09050 33a563212145459379c48a6958b55784 122 Pfam PF01196 Ribosomal protein L17 16 122 7.6E-37 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09050 33a563212145459379c48a6958b55784 122 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 122 1.2E-43 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09050 33a563212145459379c48a6958b55784 122 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 122 26.763 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09050 33a563212145459379c48a6958b55784 122 Gene3D G3DSA:3.90.1030.10 1 122 2.8E-45 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09600 6a13cc05f92c2a41772682ae48155374 419 Gene3D G3DSA:3.65.10.10 23 219 1.6E-42 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RK98_RS09600 6a13cc05f92c2a41772682ae48155374 419 Gene3D G3DSA:3.65.10.10 220 419 2.9E-45 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RK98_RS09600 6a13cc05f92c2a41772682ae48155374 419 SUPERFAMILY SSF55205 5 416 1.11E-122 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RK98_RS09600 6a13cc05f92c2a41772682ae48155374 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 3 417 39.051 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09600 6a13cc05f92c2a41772682ae48155374 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4 415 2.8E-157 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09600 6a13cc05f92c2a41772682ae48155374 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 407 1.2E-88 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RK98_RS09745 f4f472f37eb994dae3da72c41483620a 131 Hamap MF_00984 Single-stranded DNA-binding protein. 2 105 26.304 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RK98_RS09745 f4f472f37eb994dae3da72c41483620a 131 Pfam PF00436 Single-strand binding protein family 2 101 3.4E-24 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 RK98_RS09745 f4f472f37eb994dae3da72c41483620a 131 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 109 2.3E-20 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RK98_RS09745 f4f472f37eb994dae3da72c41483620a 131 SUPERFAMILY SSF50249 1 108 1.17E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS09745 f4f472f37eb994dae3da72c41483620a 131 Gene3D G3DSA:2.40.50.140 1 109 2.8E-27 T 28-03-2018 RK98_RS09745 f4f472f37eb994dae3da72c41483620a 131 PIRSF PIRSF002070 1 125 1.7E-28 T 28-03-2018 RK98_RS00395 e8d24125bd0aef401eea1d3b24f76455 333 Gene3D G3DSA:3.20.20.220 9 311 1.7E-60 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like RK98_RS00395 e8d24125bd0aef401eea1d3b24f76455 333 Pfam PF01619 Proline dehydrogenase 44 294 5.4E-31 T 28-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 RK98_RS00395 e8d24125bd0aef401eea1d3b24f76455 333 PIRSF PIRSF000196 1 304 5.1E-128 T 28-03-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 RK98_RS00395 e8d24125bd0aef401eea1d3b24f76455 333 SUPERFAMILY SSF51730 36 303 4.32E-68 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like RK98_RS08380 89a05fdee108ac44a37f61f2f5398deb 163 SUPERFAMILY SSF54637 7 157 4.98E-36 T 28-03-2018 IPR029069 HotDog domain RK98_RS08380 89a05fdee108ac44a37f61f2f5398deb 163 Pfam PF13279 Thioesterase-like superfamily 17 132 2.6E-15 T 28-03-2018 RK98_RS08380 89a05fdee108ac44a37f61f2f5398deb 163 Gene3D G3DSA:3.10.129.10 4 146 1.3E-18 T 28-03-2018 RK98_RS14380 e62356b6d55063890265393fda8bb509 114 Gene3D G3DSA:1.10.3830.10 1 108 8.7E-37 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 RK98_RS14380 e62356b6d55063890265393fda8bb509 114 Pfam PF01219 Prokaryotic diacylglycerol kinase 5 106 1.0E-32 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 RK98_RS14380 e62356b6d55063890265393fda8bb509 114 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 59 70 - T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 RK98_RS14260 497d4cabd812a39e9a96b90a2d6df9cc 207 Gene3D G3DSA:3.60.15.10 1 204 4.1E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS14260 497d4cabd812a39e9a96b90a2d6df9cc 207 SMART SM00849 12 190 1.7E-44 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS14260 497d4cabd812a39e9a96b90a2d6df9cc 207 Pfam PF00753 Metallo-beta-lactamase superfamily 9 184 5.5E-34 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS14260 497d4cabd812a39e9a96b90a2d6df9cc 207 SUPERFAMILY SSF56281 7 199 1.13E-50 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS03660 a647c2e274af9cc0eef4b9bbc5e62ce7 297 SMART SM00650 38 214 3.3E-81 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RK98_RS03660 a647c2e274af9cc0eef4b9bbc5e62ce7 297 Gene3D G3DSA:1.10.8.100 227 288 7.9E-23 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 RK98_RS03660 a647c2e274af9cc0eef4b9bbc5e62ce7 297 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 22 290 53.587 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RK98_RS03660 a647c2e274af9cc0eef4b9bbc5e62ce7 297 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 54 81 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RK98_RS03660 a647c2e274af9cc0eef4b9bbc5e62ce7 297 SUPERFAMILY SSF53335 19 291 8.0E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS03660 a647c2e274af9cc0eef4b9bbc5e62ce7 297 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 22 287 1.9E-84 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 RK98_RS03660 a647c2e274af9cc0eef4b9bbc5e62ce7 297 Pfam PF00398 Ribosomal RNA adenine dimethylase 22 289 6.2E-70 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RK98_RS03660 a647c2e274af9cc0eef4b9bbc5e62ce7 297 Gene3D G3DSA:3.40.50.150 4 226 5.6E-55 T 28-03-2018 RK98_RS05515 42242722f8dfa964420e55d71e3c77da 208 SUPERFAMILY SSF51161 29 196 1.05E-38 T 28-03-2018 IPR011004 Trimeric LpxA-like RK98_RS05515 42242722f8dfa964420e55d71e3c77da 208 Gene3D G3DSA:2.160.10.10 4 207 1.3E-39 T 28-03-2018 RK98_RS05515 42242722f8dfa964420e55d71e3c77da 208 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 49 82 5.3E-4 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS05515 42242722f8dfa964420e55d71e3c77da 208 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 154 3.0E-7 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 Gene3D G3DSA:3.50.30.20 2 142 2.0E-55 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00097 Anthranilate synthase component II signature 329 342 2.1E-6 T 28-03-2018 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00097 Anthranilate synthase component II signature 243 254 2.1E-6 T 28-03-2018 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00097 Anthranilate synthase component II signature 216 225 2.1E-6 T 28-03-2018 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 358 48.574 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 SUPERFAMILY SSF52021 4 147 4.32E-54 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 130 1.4E-49 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 Gene3D G3DSA:3.40.50.880 143 359 6.0E-52 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 Pfam PF00117 Glutamine amidotransferase class-I 176 352 1.6E-47 T 28-03-2018 IPR017926 Glutamine amidotransferase RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 SMART SM01097 3 133 6.7E-79 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 243 259 1.9E-36 T 28-03-2018 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 285 296 1.9E-36 T 28-03-2018 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 260 277 1.9E-36 T 28-03-2018 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 174 188 1.9E-36 T 28-03-2018 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 213 227 1.9E-36 T 28-03-2018 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 SUPERFAMILY SSF52317 151 357 8.44E-57 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 6 355 4.7E-146 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00096 Glutamine amidotransferase superfamily signature 329 342 2.1E-11 T 28-03-2018 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00096 Glutamine amidotransferase superfamily signature 243 254 2.1E-11 T 28-03-2018 RK98_RS12405 5c3aeccb0a3ca22a1fba53c213c21806 366 PRINTS PR00096 Glutamine amidotransferase superfamily signature 216 225 2.1E-11 T 28-03-2018 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 PIRSF PIRSF000521 6 161 6.3E-9 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 PIRSF PIRSF000521 168 394 1.6E-37 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 9 393 38.81 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 Gene3D G3DSA:3.90.1150.10 1 166 3.4E-42 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 392 8.4E-128 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 Gene3D G3DSA:3.40.640.10 167 290 6.0E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 Gene3D G3DSA:3.90.1150.10 291 394 1.1E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 3 392 4.6E-146 T 28-03-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 Hamap MF_01689 Ornithine aminotransferase [rocD]. 1 393 64.924 T 28-03-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 Pfam PF00202 Aminotransferase class-III 12 391 1.1E-128 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS05375 04e788d55b3eb1dbaefee8ed0f6862fe 394 SUPERFAMILY SSF53383 2 393 3.23E-126 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 Gene3D G3DSA:3.50.50.60 254 342 1.7E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 Gene3D G3DSA:3.50.50.60 2 134 1.9E-17 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 5.3E-16 T 28-03-2018 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 5.3E-16 T 28-03-2018 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 5.3E-16 T 28-03-2018 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.3E-16 T 28-03-2018 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 197 213 2.6E-25 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 2.6E-25 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 275 293 2.6E-25 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 2.6E-25 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 2.6E-25 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 Hamap MF_01685 Ferredoxin--NADP reductase. 1 328 34.304 T 28-03-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 Gene3D G3DSA:3.50.50.60 135 243 9.9E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 SUPERFAMILY SSF51905 1 313 3.7E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS08250 e990b7135e066a76bc48a6f0344bf2a8 344 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 291 1.3E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11245 42cc64492e45e42b3cf4ed750108562b 571 Gene3D G3DSA:3.40.190.10 183 331 3.6E-29 T 28-03-2018 RK98_RS11245 42cc64492e45e42b3cf4ed750108562b 571 Gene3D G3DSA:3.90.76.10 78 182 3.9E-22 T 28-03-2018 RK98_RS11245 42cc64492e45e42b3cf4ed750108562b 571 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 484 1.2E-78 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain RK98_RS11245 42cc64492e45e42b3cf4ed750108562b 571 SUPERFAMILY SSF53850 42 569 5.0E-100 T 28-03-2018 RK98_RS11245 42cc64492e45e42b3cf4ed750108562b 571 PIRSF PIRSF002741 1 568 1.7E-79 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RK98_RS11245 42cc64492e45e42b3cf4ed750108562b 571 Gene3D G3DSA:3.10.105.10 332 539 3.2E-47 T 28-03-2018 RK98_RS01505 bfb33459b8f3d34c19b2c3ec834960f4 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 8.7E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS01505 bfb33459b8f3d34c19b2c3ec834960f4 126 SMART SM00345 17 76 1.5E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS01505 bfb33459b8f3d34c19b2c3ec834960f4 126 SUPERFAMILY SSF46785 6 80 2.48E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS01505 bfb33459b8f3d34c19b2c3ec834960f4 126 Gene3D G3DSA:1.10.10.10 1 90 3.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06845 e3eee4d27e60e23b621b1edeef3a4fb1 456 Pfam PF03600 Citrate transporter 32 221 2.9E-24 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 RK98_RS06845 e3eee4d27e60e23b621b1edeef3a4fb1 456 Pfam PF03600 Citrate transporter 257 401 4.2E-16 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 RK98_RS06845 e3eee4d27e60e23b621b1edeef3a4fb1 456 TIGRFAM TIGR00784 citMHS: citrate transporter 8 456 5.0E-83 T 28-03-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 RK98_RS03810 1f1987a06b516a08f441f0480c941388 294 Pfam PF03466 LysR substrate binding domain 95 268 5.1E-8 T 28-03-2018 IPR005119 LysR, substrate-binding RK98_RS03810 1f1987a06b516a08f441f0480c941388 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS03810 1f1987a06b516a08f441f0480c941388 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS03810 1f1987a06b516a08f441f0480c941388 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.0E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS03810 1f1987a06b516a08f441f0480c941388 294 SUPERFAMILY SSF53850 92 272 2.72E-10 T 28-03-2018 RK98_RS03810 1f1987a06b516a08f441f0480c941388 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS03810 1f1987a06b516a08f441f0480c941388 294 Gene3D G3DSA:1.10.10.10 1 91 5.9E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03810 1f1987a06b516a08f441f0480c941388 294 SUPERFAMILY SSF46785 1 84 6.92E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03810 1f1987a06b516a08f441f0480c941388 294 Gene3D G3DSA:3.40.190.10 92 222 2.3E-8 T 28-03-2018 RK98_RS14870 41e34a8d76d48af3a629bdc4e9174b37 423 SUPERFAMILY SSF53623 1 293 4.32E-83 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS14870 41e34a8d76d48af3a629bdc4e9174b37 423 SUPERFAMILY SSF53244 295 418 1.63E-23 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RK98_RS14870 41e34a8d76d48af3a629bdc4e9174b37 423 Pfam PF08245 Mur ligase middle domain 44 267 1.6E-10 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS14870 41e34a8d76d48af3a629bdc4e9174b37 423 PIRSF PIRSF001563 1 421 1.2E-126 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 RK98_RS14870 41e34a8d76d48af3a629bdc4e9174b37 423 TIGRFAM TIGR01499 folC: bifunctional protein FolC 23 416 4.9E-113 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 RK98_RS14870 41e34a8d76d48af3a629bdc4e9174b37 423 Gene3D G3DSA:3.90.190.20 295 422 1.7E-17 T 28-03-2018 RK98_RS14870 41e34a8d76d48af3a629bdc4e9174b37 423 Gene3D G3DSA:3.40.1190.10 1 294 2.4E-71 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS14870 41e34a8d76d48af3a629bdc4e9174b37 423 Pfam PF02875 Mur ligase family, glutamate ligase domain 293 339 1.1E-5 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 SUPERFAMILY SSF54637 334 431 5.31E-11 T 28-03-2018 IPR029069 HotDog domain RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 Gene3D G3DSA:1.10.10.10 3 68 4.5E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 Pfam PF00571 CBS domain 253 304 9.0E-6 T 28-03-2018 IPR000644 CBS domain RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 Pfam PF00571 CBS domain 213 244 2.9E-4 T 28-03-2018 IPR000644 CBS domain RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 SUPERFAMILY SSF75138 71 182 2.35E-29 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 Gene3D G3DSA:3.10.129.10 298 432 2.7E-15 T 28-03-2018 RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 SMART SM00116 199 247 4.8 T 28-03-2018 IPR000644 CBS domain RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 SMART SM00116 258 306 0.67 T 28-03-2018 IPR000644 CBS domain RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 Pfam PF03061 Thioesterase superfamily 345 420 1.7E-4 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 Pfam PF07085 DRTGG domain 75 176 3.9E-29 T 28-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 Gene3D G3DSA:3.10.580.10 181 297 1.0E-23 T 28-03-2018 RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 SUPERFAMILY SSF54631 181 305 7.56E-27 T 28-03-2018 RK98_RS00050 36972b07c1ab2fefc1a8a326e55bd93a 432 Gene3D G3DSA:3.40.1390.20 69 180 3.3E-28 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like RK98_RS12810 f9447f81f472071978da45acb5e33e6c 421 Pfam PF05193 Peptidase M16 inactive domain 180 353 8.4E-28 T 28-03-2018 IPR007863 Peptidase M16, C-terminal RK98_RS12810 f9447f81f472071978da45acb5e33e6c 421 SUPERFAMILY SSF63411 243 420 5.1E-32 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RK98_RS12810 f9447f81f472071978da45acb5e33e6c 421 SUPERFAMILY SSF63411 15 223 1.04E-22 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RK98_RS12810 f9447f81f472071978da45acb5e33e6c 421 Gene3D G3DSA:3.30.830.10 6 228 3.1E-24 T 28-03-2018 RK98_RS12810 f9447f81f472071978da45acb5e33e6c 421 Gene3D G3DSA:3.30.830.10 235 421 4.3E-29 T 28-03-2018 RK98_RS03620 90525e74d73de2b7737eec8c64890d9e 321 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 11 321 49.844 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RK98_RS03620 90525e74d73de2b7737eec8c64890d9e 321 SMART SM01400 11 127 4.4E-80 T 28-03-2018 RK98_RS03620 90525e74d73de2b7737eec8c64890d9e 321 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 135 150 - T 28-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 RK98_RS03620 90525e74d73de2b7737eec8c64890d9e 321 SUPERFAMILY SSF53271 76 312 3.14E-66 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like RK98_RS03620 90525e74d73de2b7737eec8c64890d9e 321 Pfam PF14572 Phosphoribosyl synthetase-associated domain 212 320 6.3E-27 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RK98_RS03620 90525e74d73de2b7737eec8c64890d9e 321 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 11 127 2.1E-50 T 28-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RK98_RS03620 90525e74d73de2b7737eec8c64890d9e 321 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 12 321 9.8E-127 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 RK98_RS03620 90525e74d73de2b7737eec8c64890d9e 321 Gene3D G3DSA:3.40.50.2020 8 162 1.3E-66 T 28-03-2018 RK98_RS03620 90525e74d73de2b7737eec8c64890d9e 321 Gene3D G3DSA:3.40.50.2020 163 321 1.6E-46 T 28-03-2018 RK98_RS11770 6b764e334073d92cb968734a7688d314 72 Pfam PF07288 Protein of unknown function (DUF1447) 3 69 1.6E-27 T 28-03-2018 IPR009907 Protein of unknown function DUF1447 RK98_RS11770 6b764e334073d92cb968734a7688d314 72 Hamap MF_01553 UPF0356 protein . 2 70 21.26 T 28-03-2018 IPR009907 Protein of unknown function DUF1447 RK98_RS11770 6b764e334073d92cb968734a7688d314 72 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 3 64 2.0E-29 T 28-03-2018 IPR009907 Protein of unknown function DUF1447 RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 Gene3D G3DSA:3.40.50.2300 398 485 2.1E-8 T 28-03-2018 RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 Pfam PF05043 Mga helix-turn-helix domain 93 166 4.0E-9 T 28-03-2018 IPR007737 Mga helix-turn-helix domain RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 Gene3D G3DSA:1.10.1790.10 184 279 4.5E-5 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 Gene3D G3DSA:1.10.10.10 5 64 4.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 Gene3D G3DSA:1.10.10.10 87 154 1.1E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 SUPERFAMILY SSF63520 188 277 7.46E-5 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 SUPERFAMILY SSF63520 294 393 5.49E-19 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 Gene3D G3DSA:3.40.930.10 542 686 2.3E-16 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 549 684 8.0E-22 T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 Gene3D G3DSA:1.10.1790.10 280 393 8.3E-21 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 Pfam PF00874 PRD domain 198 277 1.6E-4 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 Pfam PF00874 PRD domain 300 388 5.6E-20 T 28-03-2018 IPR011608 PRD domain GO:0006355 RK98_RS05055 5d2056efe826a171691a84e22857b5b6 698 SUPERFAMILY SSF55804 546 685 2.27E-24 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS14565 2e2e4ab739a8458d9880cb6801f04f03 149 SUPERFAMILY SSF51230 71 148 3.14E-19 T 28-03-2018 IPR011053 Single hybrid motif RK98_RS14565 2e2e4ab739a8458d9880cb6801f04f03 149 Gene3D G3DSA:2.40.50.100 63 149 2.4E-13 T 28-03-2018 RK98_RS14565 2e2e4ab739a8458d9880cb6801f04f03 149 Pfam PF00364 Biotin-requiring enzyme 73 148 1.3E-18 T 28-03-2018 IPR000089 Biotin/lipoyl attachment RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 Gene3D G3DSA:1.20.1250.20 240 450 1.7E-24 T 28-03-2018 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 Pfam PF07690 Major Facilitator Superfamily 16 396 1.7E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 Gene3D G3DSA:1.20.1250.20 7 197 3.8E-23 T 28-03-2018 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 SUPERFAMILY SSF103473 236 447 2.44E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 SUPERFAMILY SSF103473 8 189 2.44E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 387 406 8.0E-33 T 28-03-2018 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 255 280 8.0E-33 T 28-03-2018 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 8.0E-33 T 28-03-2018 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 8.0E-33 T 28-03-2018 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 290 314 8.0E-33 T 28-03-2018 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 74 96 8.0E-33 T 28-03-2018 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 8.0E-33 T 28-03-2018 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 161 185 8.0E-33 T 28-03-2018 RK98_RS05610 641acc06c2177c77e4fd70e404d2fc28 450 PRINTS PR01036 Tetracycline resistance protein TetB signature 221 239 8.0E-33 T 28-03-2018 RK98_RS13285 8e53ed6a6f4f11520fbd778e54ece52c 327 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 99 243 4.2E-50 T 28-03-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RK98_RS13285 8e53ed6a6f4f11520fbd778e54ece52c 327 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 99 243 1.5E-34 T 28-03-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RK98_RS08260 146e2bb5acc50a151929691fec91a136 348 Pfam PF00107 Zinc-binding dehydrogenase 177 286 4.5E-12 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 RK98_RS08260 146e2bb5acc50a151929691fec91a136 348 SMART SM00829 31 342 4.5E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 RK98_RS08260 146e2bb5acc50a151929691fec91a136 348 Gene3D G3DSA:3.40.50.720 177 275 5.4E-11 T 28-03-2018 RK98_RS08260 146e2bb5acc50a151929691fec91a136 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 47 105 1.6E-6 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 RK98_RS08260 146e2bb5acc50a151929691fec91a136 348 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 20 343 2.6E-136 T 28-03-2018 IPR014188 Acrylyl-CoA reductase AcuI RK98_RS08260 146e2bb5acc50a151929691fec91a136 348 SUPERFAMILY SSF51735 135 309 2.58E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS08260 146e2bb5acc50a151929691fec91a136 348 SUPERFAMILY SSF50129 19 162 2.43E-38 T 28-03-2018 IPR011032 GroES-like RK98_RS08260 146e2bb5acc50a151929691fec91a136 348 Gene3D G3DSA:3.90.180.10 18 176 2.9E-33 T 28-03-2018 RK98_RS05470 49ab0dcea842a5d4e382c62b892e9913 108 SUPERFAMILY SSF54909 1 106 7.02E-28 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel RK98_RS05470 49ab0dcea842a5d4e382c62b892e9913 108 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 2.0E-16 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain RK98_RS05470 49ab0dcea842a5d4e382c62b892e9913 108 Hamap MF_01272 Heme oxygenase (staphylobilin-producing) [isdG]. 1 108 28.282 T 28-03-2018 IPR023953 Heme oxygenase IsdG GO:0004392|GO:0033212|GO:0055114 RK98_RS05470 49ab0dcea842a5d4e382c62b892e9913 108 Gene3D G3DSA:3.30.70.100 1 108 1.1E-21 T 28-03-2018 RK98_RS12655 9c99ccc0dbcf9dd2a45efa41cb291985 435 Pfam PF01134 Glucose inhibited division protein A 5 366 4.3E-112 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 RK98_RS12655 9c99ccc0dbcf9dd2a45efa41cb291985 435 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 5 434 36.023 T 28-03-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 RK98_RS12655 9c99ccc0dbcf9dd2a45efa41cb291985 435 SUPERFAMILY SSF51905 3 365 2.4E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS12655 9c99ccc0dbcf9dd2a45efa41cb291985 435 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 336 359 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 RK98_RS12655 9c99ccc0dbcf9dd2a45efa41cb291985 435 Gene3D G3DSA:3.50.50.60 1 376 3.4E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS12655 9c99ccc0dbcf9dd2a45efa41cb291985 435 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 3 434 2.2E-218 T 28-03-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 RK98_RS09325 1516dcd8b135295ec5a44fc89d330c18 227 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 26 226 1.7E-52 T 28-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 RK98_RS09325 1516dcd8b135295ec5a44fc89d330c18 227 Pfam PF03006 Haemolysin-III related 25 220 5.2E-30 T 28-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 RK98_RS14470 afb7fdf991794674b1fe65c512828910 715 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 96 692 5.3E-83 T 28-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 RK98_RS14470 afb7fdf991794674b1fe65c512828910 715 SMART SM00849 458 663 1.1E-10 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS14470 afb7fdf991794674b1fe65c512828910 715 Pfam PF00753 Metallo-beta-lactamase superfamily 456 661 2.5E-22 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS14470 afb7fdf991794674b1fe65c512828910 715 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 186 353 9.6E-23 T 28-03-2018 IPR004477 ComEC/Rec2-related protein RK98_RS14470 afb7fdf991794674b1fe65c512828910 715 SUPERFAMILY SSF56281 446 699 5.5E-45 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS14470 afb7fdf991794674b1fe65c512828910 715 Pfam PF03772 Competence protein 165 423 1.1E-53 T 28-03-2018 IPR004477 ComEC/Rec2-related protein RK98_RS14470 afb7fdf991794674b1fe65c512828910 715 Gene3D G3DSA:3.60.15.10 442 706 2.9E-25 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS12740 9f22994c93c9677bf61cf80434d1094a 155 Pfam PF17384 RimP C-terminal SH3 domain 86 150 9.6E-17 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal RK98_RS12740 9f22994c93c9677bf61cf80434d1094a 155 Pfam PF02576 RimP N-terminal domain 11 83 4.2E-25 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal RK98_RS12740 9f22994c93c9677bf61cf80434d1094a 155 SUPERFAMILY SSF74942 84 153 6.28E-18 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal RK98_RS12740 9f22994c93c9677bf61cf80434d1094a 155 SUPERFAMILY SSF75420 2 83 9.29E-24 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal RK98_RS12740 9f22994c93c9677bf61cf80434d1094a 155 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 155 21.821 T 28-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 RK98_RS12740 9f22994c93c9677bf61cf80434d1094a 155 Gene3D G3DSA:3.30.300.70 1 80 2.6E-24 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal RK98_RS12740 9f22994c93c9677bf61cf80434d1094a 155 Gene3D G3DSA:2.30.30.180 87 153 1.4E-17 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal RK98_RS08910 f0c866e96000f846840f7fabc65ba660 102 Gene3D G3DSA:3.30.70.600 3 102 3.9E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain RK98_RS08910 f0c866e96000f846840f7fabc65ba660 102 SUPERFAMILY SSF54999 5 102 1.57E-37 T 28-03-2018 IPR027486 Ribosomal protein S10 domain RK98_RS08910 f0c866e96000f846840f7fabc65ba660 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 1.8E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain RK98_RS08910 f0c866e96000f846840f7fabc65ba660 102 SMART SM01403 7 101 2.7E-57 T 28-03-2018 IPR027486 Ribosomal protein S10 domain RK98_RS08910 f0c866e96000f846840f7fabc65ba660 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.462 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08910 f0c866e96000f846840f7fabc65ba660 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 8.4E-46 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08910 f0c866e96000f846840f7fabc65ba660 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 28-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08910 f0c866e96000f846840f7fabc65ba660 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.1E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08910 f0c866e96000f846840f7fabc65ba660 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.1E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08910 f0c866e96000f846840f7fabc65ba660 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.1E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS01420 c4fd840444570ae7d7b67bdcc775bab4 186 Pfam PF00857 Isochorismatase family 5 178 1.7E-30 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RK98_RS01420 c4fd840444570ae7d7b67bdcc775bab4 186 SUPERFAMILY SSF52499 3 182 2.49E-47 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RK98_RS01420 c4fd840444570ae7d7b67bdcc775bab4 186 Gene3D G3DSA:3.40.50.850 1 184 3.3E-43 T 28-03-2018 RK98_RS07105 961b06f162eb07b87ccd2be81c98c99e 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 32 62 2.7E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS07105 961b06f162eb07b87ccd2be81c98c99e 189 Gene3D G3DSA:1.10.10.60 12 52 1.3E-11 T 28-03-2018 RK98_RS07105 961b06f162eb07b87ccd2be81c98c99e 189 SUPERFAMILY SSF46689 9 66 1.23E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS07105 961b06f162eb07b87ccd2be81c98c99e 189 Gene3D G3DSA:1.10.10.60 53 172 1.8E-5 T 28-03-2018 RK98_RS06255 79910f018f2fa740cf053b42f7fcbae8 655 Pfam PF02272 DHHA1 domain 516 645 2.3E-11 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 RK98_RS06255 79910f018f2fa740cf053b42f7fcbae8 655 Gene3D G3DSA:3.30.70.270 114 287 5.9E-4 T 28-03-2018 RK98_RS06255 79910f018f2fa740cf053b42f7fcbae8 655 SUPERFAMILY SSF64182 336 639 3.14E-67 T 28-03-2018 RK98_RS06255 79910f018f2fa740cf053b42f7fcbae8 655 Gene3D G3DSA:3.90.1640.10 315 533 7.5E-44 T 28-03-2018 RK98_RS06255 79910f018f2fa740cf053b42f7fcbae8 655 SMART SM00267 135 297 1.4E-5 T 28-03-2018 IPR000160 GGDEF domain RK98_RS06255 79910f018f2fa740cf053b42f7fcbae8 655 PIRSF PIRSF026583 1 655 7.9E-263 T 28-03-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA RK98_RS06255 79910f018f2fa740cf053b42f7fcbae8 655 Pfam PF01368 DHH family 337 494 7.3E-22 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 RK98_RS11205 383e78c8e61398580cc413829411cf45 313 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 311 68.794 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RK98_RS11205 383e78c8e61398580cc413829411cf45 313 Gene3D G3DSA:3.40.47.10 1 160 4.8E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS11205 383e78c8e61398580cc413829411cf45 313 Gene3D G3DSA:3.40.47.10 161 310 1.7E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS11205 383e78c8e61398580cc413829411cf45 313 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 4.0E-28 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RK98_RS11205 383e78c8e61398580cc413829411cf45 313 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 223 311 1.5E-35 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RK98_RS11205 383e78c8e61398580cc413829411cf45 313 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 311 8.0E-123 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 RK98_RS11205 383e78c8e61398580cc413829411cf45 313 SUPERFAMILY SSF53901 3 311 5.16E-71 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 SUPERFAMILY SSF63411 3 151 3.39E-63 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 Gene3D G3DSA:3.30.1360.80 5 151 1.1E-58 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 10 143 4.0E-76 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 5 149 2.7E-55 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 116 135 4.7E-43 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 30 48 4.7E-43 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 75 93 4.7E-43 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 7 25 4.7E-43 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 51 69 4.7E-43 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 PIRSF PIRSF006160 3 154 4.3E-65 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS09550 17e57b4c1ca4625c50ff4112ce4be5cd 156 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 3 153 34.239 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 RK98_RS13145 4bce1e6af865604d2b8db32e21d14651 287 Pfam PF14504 CAP-associated N-terminal 16 151 4.5E-35 T 28-03-2018 IPR029410 CAP-associated domain RK98_RS13145 4bce1e6af865604d2b8db32e21d14651 287 SUPERFAMILY SSF55797 161 285 2.14E-22 T 28-03-2018 IPR014044 CAP domain RK98_RS13145 4bce1e6af865604d2b8db32e21d14651 287 Gene3D G3DSA:3.30.1450.10 6 76 2.8E-6 T 28-03-2018 RK98_RS13145 4bce1e6af865604d2b8db32e21d14651 287 Gene3D G3DSA:3.40.33.10 156 287 3.5E-16 T 28-03-2018 IPR014044 CAP domain RK98_RS13145 4bce1e6af865604d2b8db32e21d14651 287 Pfam PF00188 Cysteine-rich secretory protein family 169 285 5.5E-15 T 28-03-2018 IPR014044 CAP domain RK98_RS13825 fc9a20770fdd1d9412a0f507a271715b 432 ProSitePatterns PS00885 EPSP synthase signature 2. 342 360 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RK98_RS13825 fc9a20770fdd1d9412a0f507a271715b 432 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 431 31.774 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RK98_RS13825 fc9a20770fdd1d9412a0f507a271715b 432 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 428 2.5E-114 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RK98_RS13825 fc9a20770fdd1d9412a0f507a271715b 432 PIRSF PIRSF000505 1 432 3.2E-108 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RK98_RS13825 fc9a20770fdd1d9412a0f507a271715b 432 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 425 2.1E-134 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RK98_RS13825 fc9a20770fdd1d9412a0f507a271715b 432 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 RK98_RS13825 fc9a20770fdd1d9412a0f507a271715b 432 Gene3D G3DSA:3.65.10.10 22 217 7.5E-41 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RK98_RS13825 fc9a20770fdd1d9412a0f507a271715b 432 SUPERFAMILY SSF55205 10 427 1.07E-116 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RK98_RS13825 fc9a20770fdd1d9412a0f507a271715b 432 Gene3D G3DSA:3.65.10.10 218 431 1.1E-43 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RK98_RS13125 bda8cb992065db9d9100ecf4b3e74503 49 SUPERFAMILY SSF57829 2 49 1.71E-20 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 RK98_RS13125 bda8cb992065db9d9100ecf4b3e74503 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 20.053 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS13125 bda8cb992065db9d9100ecf4b3e74503 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 28-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS13125 bda8cb992065db9d9100ecf4b3e74503 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 4.6E-22 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS13125 bda8cb992065db9d9100ecf4b3e74503 49 Pfam PF00471 Ribosomal protein L33 3 49 9.9E-25 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1177 0.0 T 28-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Gene3D G3DSA:1.20.5.340 171 285 2.6E-4 T 28-03-2018 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Pfam PF02463 RecF/RecN/SMC N terminal domain 705 1170 6.9E-29 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 141 3.5E-33 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Pfam PF06470 SMC proteins Flexible Hinge Domain 520 639 3.0E-29 T 28-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 SUPERFAMILY SSF75553 486 688 7.85E-55 T 28-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Gene3D G3DSA:1.20.5.170 286 370 8.3E-4 T 28-03-2018 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Gene3D G3DSA:1.20.5.170 764 860 2.3E-4 T 28-03-2018 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 PIRSF PIRSF005719 1 1182 0.0 T 28-03-2018 IPR024704 Structural maintenance of chromosomes protein RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Gene3D G3DSA:3.40.50.300 861 1188 3.3E-32 T 28-03-2018 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Gene3D G3DSA:3.40.50.300 1 170 2.1E-40 T 28-03-2018 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Gene3D G3DSA:1.20.120.330 371 543 1.9E-7 T 28-03-2018 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Gene3D G3DSA:1.20.120.330 666 759 0.035 T 28-03-2018 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 SMART SM00968 520 639 2.5E-41 T 28-03-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 Hamap MF_01894 Chromosome partition protein Smc [smc]. 2 1179 22.755 T 28-03-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 SUPERFAMILY SSF52540 3 215 9.02E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12570 09c152009f13ff29962fcd0359818e74 1188 SUPERFAMILY SSF52540 1076 1162 9.02E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02020 447974b0114246c5a18c1fb5c210c3b7 368 Pfam PF14657 Arm DNA-binding domain 19 58 3.4E-7 T 28-03-2018 IPR028259 AP2-like integrase, N-terminal domain RK98_RS02020 447974b0114246c5a18c1fb5c210c3b7 368 Pfam PF00589 Phage integrase family 178 357 2.3E-23 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS02020 447974b0114246c5a18c1fb5c210c3b7 368 Gene3D G3DSA:1.10.150.130 64 176 1.1E-14 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS02020 447974b0114246c5a18c1fb5c210c3b7 368 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 69 124 1.1E-13 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RK98_RS02020 447974b0114246c5a18c1fb5c210c3b7 368 SUPERFAMILY SSF56349 68 364 5.0E-57 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS02020 447974b0114246c5a18c1fb5c210c3b7 368 Gene3D G3DSA:1.10.443.10 177 359 4.5E-34 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS00175 2c5c44bb01b37ebd06e8743af36b2226 376 SUPERFAMILY SSF56784 1 375 4.77E-58 T 28-03-2018 IPR023214 HAD-like domain RK98_RS00175 2c5c44bb01b37ebd06e8743af36b2226 376 Gene3D G3DSA:3.40.50.1000 175 376 1.0E-22 T 28-03-2018 IPR023214 HAD-like domain RK98_RS00175 2c5c44bb01b37ebd06e8743af36b2226 376 Pfam PF13242 HAD-hyrolase-like 282 369 1.2E-15 T 28-03-2018 RK98_RS09260 66793e1f1d067a5e3c9f0efe7f56a1f8 169 Pfam PF03780 Asp23 family, cell envelope-related function 40 145 6.9E-34 T 28-03-2018 IPR005531 Alkaline shock protein Asp23 RK98_RS00355 788edc6ba0c20a297c98f2a157bd7cec 103 SMART SM00450 5 99 2.3E-17 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS00355 788edc6ba0c20a297c98f2a157bd7cec 103 Pfam PF00581 Rhodanese-like domain 6 94 6.1E-11 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS00355 788edc6ba0c20a297c98f2a157bd7cec 103 Gene3D G3DSA:3.40.250.10 1 103 1.8E-23 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS00355 788edc6ba0c20a297c98f2a157bd7cec 103 SUPERFAMILY SSF52821 2 100 4.85E-27 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS13645 6ed26403879ea438d174db0b1b1c9a44 83 SUPERFAMILY SSF110836 1 82 1.02E-26 T 28-03-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal RK98_RS13645 6ed26403879ea438d174db0b1b1c9a44 83 Gene3D G3DSA:3.30.1370.70 2 83 4.7E-20 T 28-03-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal RK98_RS13645 6ed26403879ea438d174db0b1b1c9a44 83 SMART SM00932 4 83 2.4E-12 T 28-03-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal RK98_RS13645 6ed26403879ea438d174db0b1b1c9a44 83 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 4 82 8.2E-19 T 28-03-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal RK98_RS05440 f26fb9e15b0a46ecbcc86b93d6b66cd9 246 SMART SM00382 26 201 1.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS05440 f26fb9e15b0a46ecbcc86b93d6b66cd9 246 Pfam PF00005 ABC transporter 18 151 4.1E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS05440 f26fb9e15b0a46ecbcc86b93d6b66cd9 246 SUPERFAMILY SSF52540 1 224 8.91E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05440 f26fb9e15b0a46ecbcc86b93d6b66cd9 246 Gene3D G3DSA:3.40.50.300 1 234 7.0E-55 T 28-03-2018 RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 5.1E-24 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01800 Staphylococcus aureus exotoxin signature 193 208 5.1E-24 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01800 Staphylococcus aureus exotoxin signature 153 169 5.1E-24 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01800 Staphylococcus aureus exotoxin signature 114 125 5.1E-24 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01898 Bacterial superantigen superfamily signature 112 125 9.8E-12 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01898 Bacterial superantigen superfamily signature 83 109 9.8E-12 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01898 Bacterial superantigen superfamily signature 208 224 9.8E-12 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01898 Bacterial superantigen superfamily signature 154 167 9.8E-12 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01898 Bacterial superantigen superfamily signature 167 181 9.8E-12 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 Gene3D G3DSA:3.10.20.120 114 226 1.0E-35 T 28-03-2018 RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 41 123 1.3E-29 T 28-03-2018 IPR015282 Staphylococcal superantigen-like OB-fold domain RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 SUPERFAMILY SSF50203 31 125 1.83E-31 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 140 205 4.7E-5 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 11 29 7.8E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 213 226 7.8E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 162 184 7.8E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 112 132 7.8E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 187 203 7.8E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 Gene3D G3DSA:2.40.50.110 49 113 1.8E-27 T 28-03-2018 RK98_RS04070 8dda858c310ac9b2020c95b5ddbd59b9 226 SUPERFAMILY SSF54334 129 225 2.09E-26 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 151 255 8.8E-23 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 Pfam PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain 69 139 2.0E-11 T 28-03-2018 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold GO:0009405 RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 Gene3D G3DSA:3.10.20.120 135 249 6.5E-37 T 28-03-2018 RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 SUPERFAMILY SSF50203 25 143 2.15E-39 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 171 194 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 PRINTS PR01898 Bacterial superantigen superfamily signature 171 184 1.5E-25 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 PRINTS PR01898 Bacterial superantigen superfamily signature 238 254 1.5E-25 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 PRINTS PR01898 Bacterial superantigen superfamily signature 184 198 1.5E-25 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 PRINTS PR01898 Bacterial superantigen superfamily signature 131 144 1.5E-25 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 PRINTS PR01898 Bacterial superantigen superfamily signature 90 116 1.5E-25 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 PRINTS PR00279 Bacterial toxin signature 133 145 2.6E-6 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 PRINTS PR00279 Bacterial toxin signature 171 187 2.6E-6 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 Gene3D G3DSA:2.40.50.110 45 134 2.6E-27 T 28-03-2018 RK98_RS00690 166fdaf06662b2522c9f26367c46e766 258 SUPERFAMILY SSF54334 144 256 3.01E-34 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 SUPERFAMILY SSF53067 157 395 4.66E-91 T 28-03-2018 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 Gene3D G3DSA:3.30.420.40 196 398 1.2E-81 T 28-03-2018 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 SUPERFAMILY SSF53067 3 196 9.71E-72 T 28-03-2018 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 Pfam PF00871 Acetokinase family 5 391 2.1E-165 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 PIRSF PIRSF000722 1 398 2.9E-152 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 PRINTS PR00471 Acetate kinase family signature 173 186 2.7E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 PRINTS PR00471 Acetate kinase family signature 203 224 2.7E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 PRINTS PR00471 Acetate kinase family signature 5 16 2.7E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 PRINTS PR00471 Acetate kinase family signature 300 313 2.7E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 PRINTS PR00471 Acetate kinase family signature 322 338 2.7E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 PRINTS PR00471 Acetate kinase family signature 378 390 2.7E-45 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 Gene3D G3DSA:3.30.420.40 4 195 2.6E-80 T 28-03-2018 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 196.067 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS00085 13817d65f6646a3c02d505a55833a46c 400 TIGRFAM TIGR00016 ackA: acetate kinase 2 395 7.2E-169 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 RK98_RS08415 35fda59ed69e462432f0ef17c83bf7ae 206 Gene3D G3DSA:1.20.1250.20 23 205 5.2E-4 T 28-03-2018 RK98_RS08415 35fda59ed69e462432f0ef17c83bf7ae 206 Pfam PF05656 Protein of unknown function (DUF805) 20 180 2.2E-17 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 RK98_RS14255 38f103419c036d9e4d7da85d0930b738 324 SUPERFAMILY SSF52540 4 280 1.27E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14255 38f103419c036d9e4d7da85d0930b738 324 Gene3D G3DSA:3.30.450.90 1 105 6.4E-26 T 28-03-2018 RK98_RS14255 38f103419c036d9e4d7da85d0930b738 324 Gene3D G3DSA:3.40.50.300 119 306 1.1E-22 T 28-03-2018 RK98_RS14255 38f103419c036d9e4d7da85d0930b738 324 Pfam PF00437 Type II/IV secretion system protein 8 267 4.9E-57 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RK98_RS14255 38f103419c036d9e4d7da85d0930b738 324 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 196 210 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 RK98_RS04440 0516f3c17186d688ca0c4332958c4f4d 367 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 358 5.0E-110 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RK98_RS04440 0516f3c17186d688ca0c4332958c4f4d 367 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 185 199 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RK98_RS04440 0516f3c17186d688ca0c4332958c4f4d 367 Gene3D G3DSA:3.90.1150.10 244 275 0.11 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS04440 0516f3c17186d688ca0c4332958c4f4d 367 Gene3D G3DSA:3.90.1150.10 276 365 5.9E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS04440 0516f3c17186d688ca0c4332958c4f4d 367 PIRSF PIRSF001434 1 362 7.8E-102 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 RK98_RS04440 0516f3c17186d688ca0c4332958c4f4d 367 SUPERFAMILY SSF53383 17 360 1.46E-88 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS04440 0516f3c17186d688ca0c4332958c4f4d 367 Gene3D G3DSA:3.40.640.10 2 243 2.0E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS07205 24a3cc75048333f3c5cdcd56ffa03725 182 Gene3D G3DSA:1.10.10.60 50 111 4.2E-5 T 28-03-2018 RK98_RS07205 24a3cc75048333f3c5cdcd56ffa03725 182 SUPERFAMILY SSF46689 6 70 2.22E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS07205 24a3cc75048333f3c5cdcd56ffa03725 182 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 60 1.2E-4 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS07205 24a3cc75048333f3c5cdcd56ffa03725 182 Gene3D G3DSA:1.10.10.60 9 49 1.1E-8 T 28-03-2018 RK98_RS03270 cb922c1837a23cf2fe4790843396481d 545 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 275 7.3E-17 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 RK98_RS03270 cb922c1837a23cf2fe4790843396481d 545 Hamap MF_00520 Ribulokinase [araB]. 1 539 62.811 T 28-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 RK98_RS03270 cb922c1837a23cf2fe4790843396481d 545 SUPERFAMILY SSF53067 3 277 8.09E-36 T 28-03-2018 RK98_RS03270 cb922c1837a23cf2fe4790843396481d 545 Gene3D G3DSA:3.30.420.40 1 272 5.5E-41 T 28-03-2018 RK98_RS03270 cb922c1837a23cf2fe4790843396481d 545 PIRSF PIRSF000538 1 531 1.2E-55 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 RK98_RS03270 cb922c1837a23cf2fe4790843396481d 545 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 285 481 3.5E-36 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 RK98_RS03270 cb922c1837a23cf2fe4790843396481d 545 Gene3D G3DSA:3.30.420.40 273 530 1.7E-49 T 28-03-2018 RK98_RS03270 cb922c1837a23cf2fe4790843396481d 545 SUPERFAMILY SSF53067 280 526 4.14E-50 T 28-03-2018 RK98_RS05850 5b9dd677c151ab814a5bdefd80c97073 98 SUPERFAMILY SSF159894 11 78 8.89E-14 T 28-03-2018 RK98_RS05850 5b9dd677c151ab814a5bdefd80c97073 98 Pfam PF04993 TfoX N-terminal domain 18 71 1.3E-8 T 28-03-2018 IPR007076 TfoX, N-terminal RK98_RS05850 5b9dd677c151ab814a5bdefd80c97073 98 Gene3D G3DSA:3.30.1460.30 3 87 5.2E-13 T 28-03-2018 RK98_RS14735 19e2fabedac55550b7fc05934348037b 86 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 41 8.9E-14 T 28-03-2018 IPR003849 Preprotein translocase YajC RK98_RS14735 19e2fabedac55550b7fc05934348037b 86 PRINTS PR01853 Bacterial YajC preprotein translocase signature 3 23 8.9E-14 T 28-03-2018 IPR003849 Preprotein translocase YajC RK98_RS14735 19e2fabedac55550b7fc05934348037b 86 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 3 83 7.7E-27 T 28-03-2018 IPR003849 Preprotein translocase YajC RK98_RS14735 19e2fabedac55550b7fc05934348037b 86 Pfam PF02699 Preprotein translocase subunit 5 81 1.0E-28 T 28-03-2018 IPR003849 Preprotein translocase YajC RK98_RS14735 19e2fabedac55550b7fc05934348037b 86 SMART SM01323 1 84 1.2E-38 T 28-03-2018 IPR003849 Preprotein translocase YajC RK98_RS14735 19e2fabedac55550b7fc05934348037b 86 Gene3D G3DSA:2.40.50.140 47 86 4.8E-5 T 28-03-2018 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 161 168 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 7.9E-33 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 193 1.0E-39 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 Gene3D G3DSA:1.10.287.990 20 89 2.9E-29 T 28-03-2018 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 PIRSF PIRSF000349 1 199 1.0E-79 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 SUPERFAMILY SSF54719 91 198 5.11E-43 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 SUPERFAMILY SSF46609 1 90 1.18E-37 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.3E-26 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 PRINTS PR01703 Manganese superoxide dismutase signature 159 171 1.3E-26 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.3E-26 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 1.3E-26 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS05635 136a78606c4a68c5c726e128754b0ade 199 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 1.3E-26 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS08670 54a8bbb443f349696d7433b2fce3218f 115 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 8 114 1.0E-30 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS08670 54a8bbb443f349696d7433b2fce3218f 115 Gene3D G3DSA:1.10.10.10 1 115 5.0E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08670 54a8bbb443f349696d7433b2fce3218f 115 Pfam PF12802 MarR family 31 88 5.3E-7 T 28-03-2018 RK98_RS08670 54a8bbb443f349696d7433b2fce3218f 115 SUPERFAMILY SSF46785 7 114 4.26E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS11920 16849ed83ebd11faedf969cc5062f387 345 Pfam PF00188 Cysteine-rich secretory protein family 233 334 5.6E-10 T 28-03-2018 IPR014044 CAP domain RK98_RS11920 16849ed83ebd11faedf969cc5062f387 345 SUPERFAMILY SSF55797 225 331 4.19E-8 T 28-03-2018 IPR014044 CAP domain RK98_RS11920 16849ed83ebd11faedf969cc5062f387 345 Gene3D G3DSA:3.40.33.10 222 339 5.6E-5 T 28-03-2018 IPR014044 CAP domain RK98_RS11920 16849ed83ebd11faedf969cc5062f387 345 Pfam PF14504 CAP-associated N-terminal 68 205 3.8E-41 T 28-03-2018 IPR029410 CAP-associated domain RK98_RS07170 18ecd551d2cf40d58ff3b3b15b09a81e 332 Gene3D G3DSA:3.40.50.720 1 113 1.2E-18 T 28-03-2018 RK98_RS07170 18ecd551d2cf40d58ff3b3b15b09a81e 332 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK98_RS07170 18ecd551d2cf40d58ff3b3b15b09a81e 332 SUPERFAMILY SSF51735 103 302 2.96E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS07170 18ecd551d2cf40d58ff3b3b15b09a81e 332 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 300 6.3E-51 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RK98_RS07170 18ecd551d2cf40d58ff3b3b15b09a81e 332 Gene3D G3DSA:3.40.50.720 114 303 1.4E-48 T 28-03-2018 RK98_RS07170 18ecd551d2cf40d58ff3b3b15b09a81e 332 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 177 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RK98_RS07170 18ecd551d2cf40d58ff3b3b15b09a81e 332 SUPERFAMILY SSF52283 1 136 1.4E-37 T 28-03-2018 RK98_RS07170 18ecd551d2cf40d58ff3b3b15b09a81e 332 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 8 332 7.8E-29 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RK98_RS07170 18ecd551d2cf40d58ff3b3b15b09a81e 332 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Gene3D G3DSA:2.30.30.170 854 925 1.2E-11 T 28-03-2018 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Gene3D G3DSA:2.30.30.170 936 1006 1.2E-11 T 28-03-2018 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Gene3D G3DSA:2.30.30.170 437 504 2.5E-8 T 28-03-2018 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Gene3D G3DSA:2.30.30.170 681 751 1.1E-14 T 28-03-2018 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Gene3D G3DSA:2.30.30.170 605 673 9.9E-8 T 28-03-2018 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Gene3D G3DSA:2.30.30.170 512 581 6.1E-16 T 28-03-2018 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 SMART SM00644 237 378 6.5E-40 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 SUPERFAMILY SSF82057 933 1004 6.41E-7 T 28-03-2018 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 SMART SM00047 1084 1243 1.0E-76 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Pfam PF13457 SH3-like domain 513 579 0.16 T 28-03-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Pfam PF13457 SH3-like domain 608 670 0.0053 T 28-03-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Pfam PF13457 SH3-like domain 683 749 2.3 T 28-03-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Pfam PF13457 SH3-like domain 778 847 0.038 T 28-03-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Pfam PF13457 SH3-like domain 937 1004 0.0037 T 28-03-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Pfam PF13457 SH3-like domain 443 501 7.4E-4 T 28-03-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 1097 1232 1.5E-14 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 SUPERFAMILY SSF55846 237 396 3.42E-33 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Gene3D G3DSA:2.30.30.170 774 849 8.9E-9 T 28-03-2018 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Gene3D G3DSA:3.40.80.10 230 407 9.7E-25 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 RK98_RS11575 a8f04b271351b8af0a039c254b87ded9 1248 Gene3D G3DSA:1.10.530.10 1080 1237 2.7E-25 T 28-03-2018 RK98_RS03875 3257440953564d81415032dc55b9fe50 244 SUPERFAMILY SSF53474 12 241 1.37E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS03875 3257440953564d81415032dc55b9fe50 244 PIRSF PIRSF017388 1 244 3.0E-75 T 28-03-2018 IPR012354 Esterase/lipase GO:0052689 RK98_RS03875 3257440953564d81415032dc55b9fe50 244 Pfam PF12146 Serine aminopeptidase, S33 17 224 1.5E-12 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 RK98_RS03875 3257440953564d81415032dc55b9fe50 244 Gene3D G3DSA:3.40.50.1820 3 243 4.7E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS12880 809ba233743f3531bb3905cd2db0b080 514 Gene3D G3DSA:3.80.30.20 210 445 2.7E-54 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe RK98_RS12880 809ba233743f3531bb3905cd2db0b080 514 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 70 504 2.2E-190 T 28-03-2018 RK98_RS12880 809ba233743f3531bb3905cd2db0b080 514 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 217 237 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 RK98_RS12880 809ba233743f3531bb3905cd2db0b080 514 Pfam PF01938 TRAM domain 443 504 3.1E-13 T 28-03-2018 IPR002792 TRAM domain RK98_RS12880 809ba233743f3531bb3905cd2db0b080 514 SMART SM00729 213 431 3.2E-63 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RK98_RS12880 809ba233743f3531bb3905cd2db0b080 514 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 69 501 5.1E-159 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 RK98_RS12880 809ba233743f3531bb3905cd2db0b080 514 Pfam PF04055 Radical SAM superfamily 217 387 3.9E-34 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS12880 809ba233743f3531bb3905cd2db0b080 514 SUPERFAMILY SSF102114 200 435 4.97E-61 T 28-03-2018 RK98_RS12880 809ba233743f3531bb3905cd2db0b080 514 Pfam PF00919 Uncharacterized protein family UPF0004 70 170 2.1E-29 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 RK98_RS12880 809ba233743f3531bb3905cd2db0b080 514 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 68 504 69.408 T 28-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 RK98_RS12420 78f5c497f9d2cfd7c7515210b0de63d4 203 Pfam PF00156 Phosphoribosyl transferase domain 46 159 1.6E-18 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RK98_RS12420 78f5c497f9d2cfd7c7515210b0de63d4 203 SUPERFAMILY SSF53271 1 199 2.75E-50 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like RK98_RS12420 78f5c497f9d2cfd7c7515210b0de63d4 203 Gene3D G3DSA:3.40.50.2020 1 203 2.6E-35 T 28-03-2018 RK98_RS12420 78f5c497f9d2cfd7c7515210b0de63d4 203 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 203 27.204 T 28-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS12420 78f5c497f9d2cfd7c7515210b0de63d4 203 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 9 176 7.7E-45 T 28-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS11120 e21b1246592368c69bc6a449a9e0d68b 191 ProSitePatterns PS00760 Signal peptidases I lysine active site. 77 89 - T 28-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 RK98_RS11120 e21b1246592368c69bc6a449a9e0d68b 191 Pfam PF00717 Peptidase S24-like 31 99 2.9E-20 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C RK98_RS11120 e21b1246592368c69bc6a449a9e0d68b 191 SUPERFAMILY SSF51306 25 182 2.79E-51 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C RK98_RS11120 e21b1246592368c69bc6a449a9e0d68b 191 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 137 156 1.2E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RK98_RS11120 e21b1246592368c69bc6a449a9e0d68b 191 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 25 41 1.2E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RK98_RS11120 e21b1246592368c69bc6a449a9e0d68b 191 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 75 87 1.2E-22 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RK98_RS11120 e21b1246592368c69bc6a449a9e0d68b 191 ProSitePatterns PS00761 Signal peptidases I signature 3. 142 155 - T 28-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 RK98_RS11120 e21b1246592368c69bc6a449a9e0d68b 191 Gene3D G3DSA:2.10.109.10 21 191 4.6E-46 T 28-03-2018 RK98_RS11120 e21b1246592368c69bc6a449a9e0d68b 191 ProSitePatterns PS00501 Signal peptidases I serine active site. 34 41 - T 28-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 RK98_RS11120 e21b1246592368c69bc6a449a9e0d68b 191 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 8 177 3.4E-53 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 RK98_RS07495 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF01610 Transposase 163 416 4.7E-51 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RK98_RS07495 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 91 1.7E-10 T 28-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RK98_RS10920 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF01610 Transposase 163 416 4.7E-51 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RK98_RS10920 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 91 1.7E-10 T 28-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RK98_RS02860 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF01610 Transposase 163 416 4.7E-51 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RK98_RS02860 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 91 1.7E-10 T 28-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RK98_RS00930 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF01610 Transposase 163 416 4.7E-51 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RK98_RS00930 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 91 1.7E-10 T 28-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RK98_RS00140 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF01610 Transposase 163 416 4.7E-51 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RK98_RS00140 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 91 1.7E-10 T 28-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RK98_RS00020 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF01610 Transposase 163 416 4.7E-51 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RK98_RS00020 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 91 1.7E-10 T 28-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RK98_RS04295 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF01610 Transposase 163 416 4.7E-51 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RK98_RS04295 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 91 1.7E-10 T 28-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RK98_RS09845 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF01610 Transposase 163 416 4.7E-51 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RK98_RS09845 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 91 1.7E-10 T 28-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RK98_RS08205 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF01610 Transposase 163 416 4.7E-51 T 28-03-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain RK98_RS08205 49128468e1f0de64124b1e1b9349a06f 439 Pfam PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 43 91 1.7E-10 T 28-03-2018 IPR029261 Transposase IS204/IS1001/IS1096/IS1165, zinc-finger RK98_RS10710 a7636603bd28637e37f7cd8d7f082a8d 331 Pfam PF04233 Phage Mu protein F like protein 188 300 3.7E-12 T 28-03-2018 IPR006528 Phage head morphogenesis domain RK98_RS10710 a7636603bd28637e37f7cd8d7f082a8d 331 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 190 305 9.6E-40 T 28-03-2018 IPR006528 Phage head morphogenesis domain RK98_RS09660 50d392ce56e1d7dcfd71fb4bb05bac23 412 SUPERFAMILY SSF53383 2 411 1.87E-182 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS09660 50d392ce56e1d7dcfd71fb4bb05bac23 412 Gene3D G3DSA:3.90.1150.10 270 411 1.8E-61 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS09660 50d392ce56e1d7dcfd71fb4bb05bac23 412 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 28-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RK98_RS09660 50d392ce56e1d7dcfd71fb4bb05bac23 412 PIRSF PIRSF000412 1 411 1.3E-168 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RK98_RS09660 50d392ce56e1d7dcfd71fb4bb05bac23 412 Pfam PF00464 Serine hydroxymethyltransferase 5 381 2.0E-180 T 28-03-2018 RK98_RS09660 50d392ce56e1d7dcfd71fb4bb05bac23 412 Gene3D G3DSA:3.40.640.10 33 269 9.9E-53 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS09660 50d392ce56e1d7dcfd71fb4bb05bac23 412 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 412 54.447 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 RK98_RS01220 89d9ed30cc1baa25decf8ab6fd105625 233 PIRSF PIRSF031509 5 233 6.9E-54 T 28-03-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 RK98_RS01220 89d9ed30cc1baa25decf8ab6fd105625 233 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 119 230 1.4E-31 T 28-03-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF RK98_RS13535 9dae0609dfe76faa88e804ac081eebaf 263 Pfam PF07728 AAA domain (dynein-related subfamily) 26 164 3.5E-28 T 28-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 RK98_RS13535 9dae0609dfe76faa88e804ac081eebaf 263 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 180 254 1.2E-4 T 28-03-2018 IPR013615 CbbQ/NirQ/NorQ, C-terminal RK98_RS13535 9dae0609dfe76faa88e804ac081eebaf 263 Gene3D G3DSA:3.40.50.300 18 170 1.9E-28 T 28-03-2018 RK98_RS13535 9dae0609dfe76faa88e804ac081eebaf 263 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 100 118 2.2E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS13535 9dae0609dfe76faa88e804ac081eebaf 263 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 27 45 2.2E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS13535 9dae0609dfe76faa88e804ac081eebaf 263 SUPERFAMILY SSF52540 23 244 1.13E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11400 4efac3b526e7d62bcce785bdc65443a7 452 Pfam PF02386 Cation transport protein 39 434 7.7E-63 T 28-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 RK98_RS05510 3be736f7f4f4e737b901426e8f2d9a8f 369 Gene3D G3DSA:3.40.50.2000 34 184 4.9E-7 T 28-03-2018 RK98_RS05510 3be736f7f4f4e737b901426e8f2d9a8f 369 Gene3D G3DSA:3.40.50.2000 185 355 1.3E-12 T 28-03-2018 RK98_RS05510 3be736f7f4f4e737b901426e8f2d9a8f 369 Pfam PF13439 Glycosyltransferase Family 4 67 176 2.5E-10 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 RK98_RS05510 3be736f7f4f4e737b901426e8f2d9a8f 369 SUPERFAMILY SSF53756 64 368 3.11E-24 T 28-03-2018 RK98_RS04735 1ba09e6633a7e70499056299a932cc04 435 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 9 412 2.1E-122 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 RK98_RS04735 1ba09e6633a7e70499056299a932cc04 435 Pfam PF05525 Branched-chain amino acid transport protein 2 424 4.9E-133 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 RK98_RS06625 130f05eaa82ebe4d634c5dbf34bd34d6 230 SMART SM00903 21 181 4.0E-4 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 RK98_RS06625 130f05eaa82ebe4d634c5dbf34bd34d6 230 Gene3D G3DSA:2.30.110.10 3 205 2.4E-47 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 RK98_RS06625 130f05eaa82ebe4d634c5dbf34bd34d6 230 SUPERFAMILY SSF50475 10 204 3.48E-44 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 RK98_RS06625 130f05eaa82ebe4d634c5dbf34bd34d6 230 Pfam PF01613 Flavin reductase like domain 23 171 3.0E-14 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 RK98_RS09850 e5592c89a22c18cbaed24d2bb4667fd7 231 SUPERFAMILY SSF52172 4 177 6.69E-36 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS09850 e5592c89a22c18cbaed24d2bb4667fd7 231 SMART SM00448 3 113 3.1E-35 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS09850 e5592c89a22c18cbaed24d2bb4667fd7 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 225 1.3E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS09850 e5592c89a22c18cbaed24d2bb4667fd7 231 Gene3D G3DSA:1.10.10.10 121 229 4.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS09850 e5592c89a22c18cbaed24d2bb4667fd7 231 Gene3D G3DSA:3.40.50.2300 1 120 5.5E-32 T 28-03-2018 RK98_RS09850 e5592c89a22c18cbaed24d2bb4667fd7 231 Pfam PF00072 Response regulator receiver domain 5 114 8.1E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS09850 e5592c89a22c18cbaed24d2bb4667fd7 231 SMART SM00862 148 225 1.9E-16 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS06245 f3e0f4136216cffccc5e2d0010ab6fd1 466 Gene3D G3DSA:3.40.50.300 167 466 1.6E-75 T 28-03-2018 RK98_RS06245 f3e0f4136216cffccc5e2d0010ab6fd1 466 Gene3D G3DSA:1.10.860.10 2 151 7.4E-44 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal RK98_RS06245 f3e0f4136216cffccc5e2d0010ab6fd1 466 Pfam PF00772 DnaB-like helicase N terminal domain 10 110 1.5E-33 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RK98_RS06245 f3e0f4136216cffccc5e2d0010ab6fd1 466 SUPERFAMILY SSF52540 183 450 6.64E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06245 f3e0f4136216cffccc5e2d0010ab6fd1 466 SUPERFAMILY SSF48024 8 119 8.11E-35 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 RK98_RS06245 f3e0f4136216cffccc5e2d0010ab6fd1 466 Pfam PF03796 DnaB-like helicase C terminal domain 185 457 4.0E-115 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 RK98_RS06245 f3e0f4136216cffccc5e2d0010ab6fd1 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 458 1.9E-176 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 RK98_RS01310 442e85afca88860f0994d764e174e613 475 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 473 38.716 T 28-03-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RK98_RS01310 442e85afca88860f0994d764e174e613 475 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 141 155 - T 28-03-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 RK98_RS01310 442e85afca88860f0994d764e174e613 475 Gene3D G3DSA:1.10.10.410 412 473 8.9E-25 T 28-03-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal RK98_RS01310 442e85afca88860f0994d764e174e613 475 SMART SM00845 325 472 1.3E-74 T 28-03-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 RK98_RS01310 442e85afca88860f0994d764e174e613 475 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 472 2.2E-179 T 28-03-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 RK98_RS01310 442e85afca88860f0994d764e174e613 475 SUPERFAMILY SSF55931 4 293 5.95E-123 T 28-03-2018 RK98_RS01310 442e85afca88860f0994d764e174e613 475 SUPERFAMILY SSF89095 294 399 5.41E-34 T 28-03-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 RK98_RS01310 442e85afca88860f0994d764e174e613 475 Pfam PF02637 GatB domain 325 472 4.4E-54 T 28-03-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 RK98_RS01310 442e85afca88860f0994d764e174e613 475 Pfam PF02934 GatB/GatE catalytic domain 5 285 2.4E-112 T 28-03-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 RK98_RS06755 2c3d5f73100ef78f2ab27d78781a51e6 877 Gene3D G3DSA:2.60.40.1280 212 369 2.2E-31 T 28-03-2018 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 RK98_RS06755 2c3d5f73100ef78f2ab27d78781a51e6 877 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 368 524 1.3E-39 T 28-03-2018 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 RK98_RS06755 2c3d5f73100ef78f2ab27d78781a51e6 877 SUPERFAMILY SSF49401 365 559 4.52E-39 T 28-03-2018 IPR008966 Adhesion domain RK98_RS06755 2c3d5f73100ef78f2ab27d78781a51e6 877 Pfam PF00746 LPXTG cell wall anchor motif 831 872 3.3E-10 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS06755 2c3d5f73100ef78f2ab27d78781a51e6 877 SUPERFAMILY SSF49401 212 359 9.94E-30 T 28-03-2018 IPR008966 Adhesion domain RK98_RS06755 2c3d5f73100ef78f2ab27d78781a51e6 877 Gene3D G3DSA:2.60.40.1290 370 531 4.7E-44 T 28-03-2018 RK98_RS06755 2c3d5f73100ef78f2ab27d78781a51e6 877 Pfam PF04650 YSIRK type signal peptide 10 35 5.5E-11 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS06755 2c3d5f73100ef78f2ab27d78781a51e6 877 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 9 47 6.9E-14 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS06755 2c3d5f73100ef78f2ab27d78781a51e6 877 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 838 870 3.3E-7 T 28-03-2018 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 443 2.5E-17 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 9.4E-43 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 4.2E-183 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 SUPERFAMILY SSF55957 359 448 5.62E-26 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 446 45.269 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 SUPERFAMILY SSF53738 159 258 3.02E-26 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 1.7E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 1.7E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 1.7E-12 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 Gene3D G3DSA:3.40.120.10 168 264 1.9E-25 T 28-03-2018 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 Gene3D G3DSA:3.30.310.50 376 448 2.3E-22 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 255 3.2E-15 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 371 6.7E-33 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 SUPERFAMILY SSF53738 3 181 6.28E-48 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 Gene3D G3DSA:3.40.120.10 265 375 2.0E-32 T 28-03-2018 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 SUPERFAMILY SSF53738 259 367 1.53E-30 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 RK98_RS09415 491aba483ef5bdd60b7552dc2dfbc977 451 Gene3D G3DSA:3.40.120.10 2 167 8.5E-44 T 28-03-2018 RK98_RS11615 6377ff5ffcc4f7369f376805db1b9fc7 366 PIRSF PIRSF000292 1 301 2.1E-100 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 RK98_RS11615 6377ff5ffcc4f7369f376805db1b9fc7 366 Gene3D G3DSA:2.60.40.420 109 269 3.3E-37 T 28-03-2018 IPR008972 Cupredoxin RK98_RS11615 6377ff5ffcc4f7369f376805db1b9fc7 366 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 8 230 4.5E-130 T 28-03-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 RK98_RS11615 6377ff5ffcc4f7369f376805db1b9fc7 366 Gene3D G3DSA:1.10.287.90 20 108 9.3E-23 T 28-03-2018 RK98_RS11615 6377ff5ffcc4f7369f376805db1b9fc7 366 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 25 102 1.8E-11 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11615 6377ff5ffcc4f7369f376805db1b9fc7 366 SUPERFAMILY SSF81464 14 110 7.68E-22 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS11615 6377ff5ffcc4f7369f376805db1b9fc7 366 SUPERFAMILY SSF49503 113 247 6.53E-39 T 28-03-2018 IPR008972 Cupredoxin RK98_RS05530 105acf53507e728b586c8b566d540172 342 SUPERFAMILY SSF51735 1 259 1.52E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05530 105acf53507e728b586c8b566d540172 342 Pfam PF02719 Polysaccharide biosynthesis protein 7 281 1.3E-105 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain RK98_RS05530 105acf53507e728b586c8b566d540172 342 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 284 331 2.2E-20 T 28-03-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 RK98_RS05530 105acf53507e728b586c8b566d540172 342 Gene3D G3DSA:3.40.50.720 1 330 7.3E-63 T 28-03-2018 RK98_RS07095 d8a2765632c612d6257b22f78618d4d6 76 Gene3D G3DSA:1.10.287.540 1 53 3.6E-20 T 28-03-2018 RK98_RS07095 d8a2765632c612d6257b22f78618d4d6 76 Hamap MF_01103 UPF0291 protein . 1 57 12.45 T 28-03-2018 IPR009242 Protein of unknown function DUF896 RK98_RS07095 d8a2765632c612d6257b22f78618d4d6 76 SUPERFAMILY SSF158221 2 39 1.96E-11 T 28-03-2018 RK98_RS07095 d8a2765632c612d6257b22f78618d4d6 76 Pfam PF05979 Bacterial protein of unknown function (DUF896) 3 64 2.8E-25 T 28-03-2018 IPR009242 Protein of unknown function DUF896 RK98_RS09495 1221229da0044fa1a7d25c178bbf380d 221 Pfam PF13460 NAD(P)H-binding 7 192 2.2E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS09495 1221229da0044fa1a7d25c178bbf380d 221 Gene3D G3DSA:3.40.50.720 1 217 8.6E-29 T 28-03-2018 RK98_RS09495 1221229da0044fa1a7d25c178bbf380d 221 SUPERFAMILY SSF51735 1 206 6.86E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS04460 6fa1150015fb2b2b8f263e1fd12ad3ba 250 Pfam PF04199 Putative cyclase 19 185 4.1E-35 T 28-03-2018 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 RK98_RS04460 6fa1150015fb2b2b8f263e1fd12ad3ba 250 Gene3D G3DSA:3.50.30.50 14 249 9.1E-53 T 28-03-2018 RK98_RS04460 6fa1150015fb2b2b8f263e1fd12ad3ba 250 SUPERFAMILY SSF102198 16 246 1.12E-54 T 28-03-2018 RK98_RS02775 d934ccf5a6673786ca20ee66836f2364 277 PIRSF PIRSF006483 1 277 1.1E-76 T 28-03-2018 IPR003740 Uncharacterised membrane protein YitT RK98_RS02775 d934ccf5a6673786ca20ee66836f2364 277 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 7 210 8.2E-59 T 28-03-2018 IPR003740 Uncharacterised membrane protein YitT RK98_RS02775 d934ccf5a6673786ca20ee66836f2364 277 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 5.1E-22 T 28-03-2018 IPR019264 Domain of unknown function DUF2179 RK98_RS02975 4688d95ecb53092ac55271cf72c058f4 127 SUPERFAMILY SSF50814 2 125 4.42E-37 T 28-03-2018 IPR012674 Calycin RK98_RS02975 4688d95ecb53092ac55271cf72c058f4 127 Gene3D G3DSA:2.40.128.20 1 127 8.4E-35 T 28-03-2018 IPR012674 Calycin RK98_RS02975 4688d95ecb53092ac55271cf72c058f4 127 Pfam PF09148 Domain of unknown function (DUF1934) 4 120 1.6E-30 T 28-03-2018 IPR015231 Protein of unknown function DUF1934 RK98_RS03130 c4a18c96b536649a15acdc43e09e28b2 55 Pfam PF17412 Family of unknown function 1 55 2.5E-38 T 28-03-2018 IPR035374 Protein VraX RK98_RS03130 c4a18c96b536649a15acdc43e09e28b2 55 ProDom PD439017 VRAX 1 55 1.0E-25 T 28-03-2018 IPR035374 Protein VraX RK98_RS03555 1a2c2a1480c59c2b2dd88e36e791ee33 293 SUPERFAMILY SSF118352 232 291 4.05E-20 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RK98_RS03555 1a2c2a1480c59c2b2dd88e36e791ee33 293 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 292 41.098 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RK98_RS03555 1a2c2a1480c59c2b2dd88e36e791ee33 293 Gene3D G3DSA:3.90.1280.10 236 289 2.3E-22 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 RK98_RS03555 1a2c2a1480c59c2b2dd88e36e791ee33 293 PIRSF PIRSF005261 1 293 7.7E-75 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RK98_RS03555 1a2c2a1480c59c2b2dd88e36e791ee33 293 SUPERFAMILY SSF64397 3 241 1.1E-75 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RK98_RS03555 1a2c2a1480c59c2b2dd88e36e791ee33 293 Gene3D G3DSA:3.55.30.10 3 235 1.0E-76 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 RK98_RS03555 1a2c2a1480c59c2b2dd88e36e791ee33 293 Pfam PF01430 Hsp33 protein 4 280 6.3E-89 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 SUPERFAMILY SSF51064 153 208 1.29E-17 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 PRINTS PR00773 GrpE protein signature 106 121 2.3E-31 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 PRINTS PR00773 GrpE protein signature 187 206 2.3E-31 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 PRINTS PR00773 GrpE protein signature 160 175 2.3E-31 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 PRINTS PR00773 GrpE protein signature 78 94 2.3E-31 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 Gene3D G3DSA:3.90.20.20 3 151 1.3E-22 T 28-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 Gene3D G3DSA:2.30.22.10 152 208 3.8E-20 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 Hamap MF_01151 Protein GrpE [grpE]. 4 208 21.069 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 Pfam PF01025 GrpE 49 208 3.6E-47 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 SUPERFAMILY SSF58014 55 152 2.35E-25 T 28-03-2018 RK98_RS14440 3a341558e4450624dcf6eea658f5b1f0 208 ProSitePatterns PS01071 grpE protein signature. 163 206 - T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 RK98_RS00425 a1a4921e31982404356c7dc4154d1401 104 Gene3D G3DSA:1.10.10.10 1 94 8.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS00425 a1a4921e31982404356c7dc4154d1401 104 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 3.4E-16 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS00425 a1a4921e31982404356c7dc4154d1401 104 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 31 49 - T 28-03-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 RK98_RS00425 a1a4921e31982404356c7dc4154d1401 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 7.7E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS00425 a1a4921e31982404356c7dc4154d1401 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 7.7E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS00425 a1a4921e31982404356c7dc4154d1401 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 7.7E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS00425 a1a4921e31982404356c7dc4154d1401 104 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 7.7E-17 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS00425 a1a4921e31982404356c7dc4154d1401 104 SMART SM00418 8 82 9.1E-24 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 RK98_RS00425 a1a4921e31982404356c7dc4154d1401 104 SUPERFAMILY SSF46785 2 85 2.63E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS10580 b5cca56d0a2e2c6a379dee178d177066 141 PIRSF PIRSF002070 1 140 2.3E-40 T 28-03-2018 RK98_RS10580 b5cca56d0a2e2c6a379dee178d177066 141 Pfam PF00436 Single-strand binding protein family 2 103 1.7E-36 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 RK98_RS10580 b5cca56d0a2e2c6a379dee178d177066 141 Gene3D G3DSA:2.40.50.140 1 122 1.4E-40 T 28-03-2018 RK98_RS10580 b5cca56d0a2e2c6a379dee178d177066 141 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 35.299 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RK98_RS10580 b5cca56d0a2e2c6a379dee178d177066 141 SUPERFAMILY SSF50249 1 141 4.11E-48 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS10580 b5cca56d0a2e2c6a379dee178d177066 141 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 131 8.9E-43 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RK98_RS03015 5d981de2737d25d6a4e1df2a537b25f8 312 Pfam PF00248 Aldo/keto reductase family 16 307 1.3E-74 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS03015 5d981de2737d25d6a4e1df2a537b25f8 312 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 142 159 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RK98_RS03015 5d981de2737d25d6a4e1df2a537b25f8 312 SUPERFAMILY SSF51430 4 308 2.36E-91 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS03015 5d981de2737d25d6a4e1df2a537b25f8 312 Gene3D G3DSA:3.20.20.100 1 311 4.7E-92 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS03015 5d981de2737d25d6a4e1df2a537b25f8 312 PRINTS PR00069 Aldo-keto reductase signature 111 129 2.5E-19 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS03015 5d981de2737d25d6a4e1df2a537b25f8 312 PRINTS PR00069 Aldo-keto reductase signature 241 265 2.5E-19 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS03015 5d981de2737d25d6a4e1df2a537b25f8 312 PRINTS PR00069 Aldo-keto reductase signature 45 69 2.5E-19 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS03015 5d981de2737d25d6a4e1df2a537b25f8 312 PRINTS PR00069 Aldo-keto reductase signature 142 159 2.5E-19 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS06335 e95c2f3080e3db69eaf670cdd896f55a 117 SUPERFAMILY SSF54211 1 115 7.59E-33 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS06335 e95c2f3080e3db69eaf670cdd896f55a 117 Pfam PF00825 Ribonuclease P 3 108 2.2E-30 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RK98_RS06335 e95c2f3080e3db69eaf670cdd896f55a 117 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 3 112 19.189 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RK98_RS06335 e95c2f3080e3db69eaf670cdd896f55a 117 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 108 9.6E-27 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RK98_RS06335 e95c2f3080e3db69eaf670cdd896f55a 117 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 53 67 - T 28-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 RK98_RS06335 e95c2f3080e3db69eaf670cdd896f55a 117 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 9 117 6.0E-57 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 RK98_RS06335 e95c2f3080e3db69eaf670cdd896f55a 117 Gene3D G3DSA:3.30.230.10 1 117 1.5E-30 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 SMART SM00345 10 69 5.8E-13 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 6 239 1.1E-68 T 28-03-2018 IPR012770 Trehalose operon transcriptional repressor RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 SUPERFAMILY SSF64288 76 236 3.3E-30 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 4.7E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 Pfam PF07702 UTRA domain 92 232 5.0E-26 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 SUPERFAMILY SSF46785 3 73 2.56E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 SMART SM00866 91 232 6.0E-15 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 Gene3D G3DSA:3.40.1410.10 75 242 8.1E-22 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.5E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.5E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS03780 2db67f1c16ea31ab8aeeaacba6f3f5b3 242 Gene3D G3DSA:1.10.10.10 1 70 4.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 67 76 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 103 142 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 Gene3D G3DSA:3.40.630.10 290 398 0.0049 T 28-03-2018 RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 Pfam PF01546 Peptidase family M20/M25/M40 68 387 2.8E-37 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 SUPERFAMILY SSF53187 317 388 8.57E-54 T 28-03-2018 RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 SUPERFAMILY SSF53187 7 176 8.57E-54 T 28-03-2018 RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 SUPERFAMILY SSF55031 177 226 4.78E-16 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 SUPERFAMILY SSF55031 253 301 4.78E-16 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 Pfam PF07687 Peptidase dimerisation domain 173 302 2.6E-23 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 10 384 1.6E-87 T 28-03-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase RK98_RS01895 0eb4ab7887656ac5bd3d815d90df6ae0 400 Gene3D G3DSA:3.40.630.10 4 289 6.0E-61 T 28-03-2018 RK98_RS02795 b2f3bf055a08e5ea6f3221b67aed152f 431 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 56 288 1.0E-51 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 RK98_RS02795 b2f3bf055a08e5ea6f3221b67aed152f 431 SUPERFAMILY SSF69189 316 382 1.29E-26 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 RK98_RS02795 b2f3bf055a08e5ea6f3221b67aed152f 431 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 1.5E-15 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RK98_RS02795 b2f3bf055a08e5ea6f3221b67aed152f 431 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 1.5E-15 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RK98_RS02795 b2f3bf055a08e5ea6f3221b67aed152f 431 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 74 85 1.5E-15 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 RK98_RS02795 b2f3bf055a08e5ea6f3221b67aed152f 431 Gene3D G3DSA:2.30.140.20 315 381 5.5E-27 T 28-03-2018 IPR015294 Penicillin-binding protein 4, C-terminal domain RK98_RS02795 b2f3bf055a08e5ea6f3221b67aed152f 431 SUPERFAMILY SSF56601 2 315 4.35E-71 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like RK98_RS02795 b2f3bf055a08e5ea6f3221b67aed152f 431 Gene3D G3DSA:3.40.710.10 25 314 4.6E-37 T 28-03-2018 RK98_RS02795 b2f3bf055a08e5ea6f3221b67aed152f 431 Pfam PF09211 Domain of unknown function (DUF1958) 317 382 3.8E-30 T 28-03-2018 IPR015294 Penicillin-binding protein 4, C-terminal domain RK98_RS09760 d08225797f05c74fffe8732e26c72382 276 Pfam PF08543 Phosphomethylpyrimidine kinase 14 260 1.1E-92 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 RK98_RS09760 d08225797f05c74fffe8732e26c72382 276 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 262 9.7E-94 T 28-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09760 d08225797f05c74fffe8732e26c72382 276 SUPERFAMILY SSF53613 5 266 4.52E-76 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS09760 d08225797f05c74fffe8732e26c72382 276 Gene3D G3DSA:3.40.1190.20 4 276 5.8E-57 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS07075 eb5a446d46763abfcefd56ddda9de505 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 54 3.5E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS07075 eb5a446d46763abfcefd56ddda9de505 185 Gene3D G3DSA:1.10.10.60 1 43 2.0E-16 T 28-03-2018 RK98_RS07075 eb5a446d46763abfcefd56ddda9de505 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.4E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS07075 eb5a446d46763abfcefd56ddda9de505 185 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.4E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS07075 eb5a446d46763abfcefd56ddda9de505 185 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site RK98_RS07075 eb5a446d46763abfcefd56ddda9de505 185 SUPERFAMILY SSF46689 1 76 1.25E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS07075 eb5a446d46763abfcefd56ddda9de505 185 Gene3D G3DSA:1.10.10.60 44 125 1.0E-7 T 28-03-2018 RK98_RS09040 e6bdf521b54659049c8e35e5ba4fbaf3 129 SUPERFAMILY SSF53137 14 129 2.42E-49 T 28-03-2018 RK98_RS09040 e6bdf521b54659049c8e35e5ba4fbaf3 129 Gene3D G3DSA:3.30.420.80 5 129 4.0E-44 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RK98_RS09040 e6bdf521b54659049c8e35e5ba4fbaf3 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 28-03-2018 IPR018102 Ribosomal S11, conserved site RK98_RS09040 e6bdf521b54659049c8e35e5ba4fbaf3 129 PIRSF PIRSF002131 1 129 1.0E-53 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RK98_RS09040 e6bdf521b54659049c8e35e5ba4fbaf3 129 Pfam PF00411 Ribosomal protein S11 19 128 8.3E-51 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RK98_RS09040 e6bdf521b54659049c8e35e5ba4fbaf3 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 34.288 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 RK98_RS09040 e6bdf521b54659049c8e35e5ba4fbaf3 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.5E-59 T 28-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS04345 5d1caa4a71d3a3dfe9d99204dee9a485 193 SUPERFAMILY SSF53254 1 193 1.39E-45 T 28-03-2018 IPR029033 Histidine phosphatase superfamily RK98_RS04345 5d1caa4a71d3a3dfe9d99204dee9a485 193 SMART SM00855 2 167 1.8E-14 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RK98_RS04345 5d1caa4a71d3a3dfe9d99204dee9a485 193 Gene3D G3DSA:3.40.50.1240 1 193 9.4E-46 T 28-03-2018 IPR029033 Histidine phosphatase superfamily RK98_RS04345 5d1caa4a71d3a3dfe9d99204dee9a485 193 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 192 1.0E-40 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RK98_RS04345 5d1caa4a71d3a3dfe9d99204dee9a485 193 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 RK98_RS04345 5d1caa4a71d3a3dfe9d99204dee9a485 193 PIRSF PIRSF000709 1 189 5.7E-26 T 28-03-2018 RK98_RS11150 3dcbeef6cab21792fc111a034b3067c1 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 262 5.5E-64 T 28-03-2018 IPR023214 HAD-like domain RK98_RS11150 3dcbeef6cab21792fc111a034b3067c1 274 SUPERFAMILY SSF56784 1 266 4.14E-69 T 28-03-2018 IPR023214 HAD-like domain RK98_RS11150 3dcbeef6cab21792fc111a034b3067c1 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 262 3.4E-61 T 28-03-2018 IPR000150 Cof family GO:0016787 RK98_RS11150 3dcbeef6cab21792fc111a034b3067c1 274 Gene3D G3DSA:3.40.50.1000 1 272 4.9E-37 T 28-03-2018 IPR023214 HAD-like domain RK98_RS11150 3dcbeef6cab21792fc111a034b3067c1 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 185 235 1.3E-12 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RK98_RS11150 3dcbeef6cab21792fc111a034b3067c1 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 81 2.6E-12 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RK98_RS11150 3dcbeef6cab21792fc111a034b3067c1 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 28-03-2018 RK98_RS11535 c995b3c830e36ab9dd0af25aaa28db6f 273 Pfam PF00378 Enoyl-CoA hydratase/isomerase 18 268 3.2E-89 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 RK98_RS11535 c995b3c830e36ab9dd0af25aaa28db6f 273 TIGRFAM TIGR01929 menB: naphthoate synthase 12 269 7.5E-128 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 RK98_RS11535 c995b3c830e36ab9dd0af25aaa28db6f 273 Gene3D G3DSA:1.10.12.10 213 261 2.1E-15 T 28-03-2018 IPR014748 Crontonase, C-terminal RK98_RS11535 c995b3c830e36ab9dd0af25aaa28db6f 273 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 6 272 55.309 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 RK98_RS11535 c995b3c830e36ab9dd0af25aaa28db6f 273 SUPERFAMILY SSF52096 6 269 5.41E-78 T 28-03-2018 IPR029045 ClpP/crotonase-like domain RK98_RS11535 c995b3c830e36ab9dd0af25aaa28db6f 273 Gene3D G3DSA:3.90.226.10 1 212 1.9E-61 T 28-03-2018 RK98_RS10910 4a061197285cd6cb78223f860474a2a1 127 PIRSF PIRSF012565 1 126 4.3E-52 T 28-03-2018 IPR009370 Protein of unknown function DUF1027 RK98_RS10910 4a061197285cd6cb78223f860474a2a1 127 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 3.6E-37 T 28-03-2018 IPR009370 Protein of unknown function DUF1027 RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 SUPERFAMILY SSF54334 133 231 8.51E-31 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 Gene3D G3DSA:3.10.20.120 120 231 5.0E-34 T 28-03-2018 RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01898 Bacterial superantigen superfamily signature 115 128 6.6E-19 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01898 Bacterial superantigen superfamily signature 214 230 6.6E-19 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01898 Bacterial superantigen superfamily signature 86 112 6.6E-19 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01898 Bacterial superantigen superfamily signature 160 173 6.6E-19 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01898 Bacterial superantigen superfamily signature 173 187 6.6E-19 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 160 183 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 45 126 8.0E-32 T 28-03-2018 IPR015282 Staphylococcal superantigen-like OB-fold domain RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 SUPERFAMILY SSF50203 38 126 1.71E-28 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 168 190 3.1E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 36 53 3.1E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 193 209 3.1E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 115 135 3.1E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 16 34 3.1E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 219 232 3.1E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01800 Staphylococcus aureus exotoxin signature 117 128 6.0E-23 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 6.0E-23 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01800 Staphylococcus aureus exotoxin signature 159 175 6.0E-23 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 PRINTS PR01800 Staphylococcus aureus exotoxin signature 199 214 6.0E-23 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 Gene3D G3DSA:2.40.50.110 53 119 4.9E-24 T 28-03-2018 RK98_RS04040 25020db657fe8f46d8378e68caaf41e4 232 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 157 214 3.9E-10 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS06125 9785970aae952ef85b0f29d652d3528a 142 SUPERFAMILY SSF54637 2 139 2.33E-31 T 28-03-2018 IPR029069 HotDog domain RK98_RS06125 9785970aae952ef85b0f29d652d3528a 142 Gene3D G3DSA:3.10.129.10 1 142 2.0E-27 T 28-03-2018 RK98_RS06125 9785970aae952ef85b0f29d652d3528a 142 Pfam PF01575 MaoC like domain 8 121 7.9E-33 T 28-03-2018 IPR002539 MaoC-like domain RK98_RS06410 f56a6031af6ca37f61b77af25b91e50d 338 Pfam PF03824 High-affinity nickel-transport protein 40 325 2.4E-99 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 RK98_RS06410 f56a6031af6ca37f61b77af25b91e50d 338 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 43 320 5.4E-114 T 28-03-2018 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 RK98_RS07355 31c7eccda4b827fab53dda2dee7f6049 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 6.8E-50 T 28-03-2018 IPR000150 Cof family GO:0016787 RK98_RS07355 31c7eccda4b827fab53dda2dee7f6049 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 259 5.8E-51 T 28-03-2018 IPR023214 HAD-like domain RK98_RS07355 31c7eccda4b827fab53dda2dee7f6049 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 2.9E-23 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RK98_RS07355 31c7eccda4b827fab53dda2dee7f6049 266 SUPERFAMILY SSF56784 1 263 2.92E-57 T 28-03-2018 IPR023214 HAD-like domain RK98_RS07355 31c7eccda4b827fab53dda2dee7f6049 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 28-03-2018 RK98_RS07355 31c7eccda4b827fab53dda2dee7f6049 266 Gene3D G3DSA:3.40.50.1000 1 266 1.2E-27 T 28-03-2018 IPR023214 HAD-like domain RK98_RS04590 d6909f7efbe9f70d3c8f08498bbe63ae 147 Gene3D G3DSA:3.40.930.10 1 147 8.5E-32 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS04590 d6909f7efbe9f70d3c8f08498bbe63ae 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 145 7.5E-31 T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS04590 d6909f7efbe9f70d3c8f08498bbe63ae 147 SUPERFAMILY SSF55804 3 145 2.75E-33 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS11360 4a0890c4e1aabc81226edec1e0d2ff30 169 Pfam PF13563 2'-5' RNA ligase superfamily 10 156 6.1E-20 T 28-03-2018 RK98_RS11360 4a0890c4e1aabc81226edec1e0d2ff30 169 Hamap MF_01444 Putative phosphoesterase . 1 169 36.02 T 28-03-2018 IPR022932 Putative phosphoesterase YjcG RK98_RS11360 4a0890c4e1aabc81226edec1e0d2ff30 169 SUPERFAMILY SSF55144 1 168 2.41E-29 T 28-03-2018 IPR009097 Cyclic phosphodiesterase RK98_RS11360 4a0890c4e1aabc81226edec1e0d2ff30 169 Gene3D G3DSA:3.90.1140.10 1 169 2.2E-22 T 28-03-2018 RK98_RS05625 258f15431d9d73ecbc5908ca6bc6ecb1 251 SUPERFAMILY SSF46785 7 79 1.24E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS05625 258f15431d9d73ecbc5908ca6bc6ecb1 251 Gene3D G3DSA:1.10.10.10 4 76 5.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS05625 258f15431d9d73ecbc5908ca6bc6ecb1 251 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 2.8E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS05625 258f15431d9d73ecbc5908ca6bc6ecb1 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 7.1E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS05625 258f15431d9d73ecbc5908ca6bc6ecb1 251 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 7.1E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS05625 258f15431d9d73ecbc5908ca6bc6ecb1 251 SMART SM00345 16 75 3.8E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS05720 5d63b30974ead7a1fef5ec774264f6f2 336 TIGRFAM TIGR03944 dehyd_SbnB_fam: 2,3-diaminopropionate biosynthesis protein SbnB 5 336 9.2E-127 T 28-03-2018 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB RK98_RS05720 5d63b30974ead7a1fef5ec774264f6f2 336 PIRSF PIRSF001439 1 336 5.2E-85 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 RK98_RS05720 5d63b30974ead7a1fef5ec774264f6f2 336 SUPERFAMILY SSF51735 4 335 7.78E-80 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05720 5d63b30974ead7a1fef5ec774264f6f2 336 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 22 327 1.1E-64 T 28-03-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 RK98_RS05720 5d63b30974ead7a1fef5ec774264f6f2 336 Gene3D G3DSA:3.40.50.720 148 308 1.5E-22 T 28-03-2018 RK98_RS05720 5d63b30974ead7a1fef5ec774264f6f2 336 Gene3D G3DSA:3.30.1780.10 3 147 7.2E-34 T 28-03-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 4 395 2.3E-162 T 28-03-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 Gene3D G3DSA:3.90.1150.10 1 169 1.8E-42 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 PIRSF PIRSF000521 172 396 1.2E-34 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 PIRSF PIRSF000521 1 159 2.2E-10 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 Pfam PF00202 Aminotransferase class-III 15 394 1.0E-133 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 SUPERFAMILY SSF53383 2 395 3.46E-128 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 12 396 38.237 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 Gene3D G3DSA:3.90.1150.10 294 396 9.8E-29 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 Hamap MF_01689 Ornithine aminotransferase [rocD]. 4 396 68.74 T 28-03-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS11080 12faadc1b1e0c8e04739efd48310ee44 396 Gene3D G3DSA:3.40.640.10 170 293 1.0E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS08900 d624d9da36aa4aad14317908d2d6becf 444 Pfam PF00860 Permease family 17 404 1.2E-41 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 RK98_RS08900 d624d9da36aa4aad14317908d2d6becf 444 PIRSF PIRSF005353 1 444 1.2E-170 T 28-03-2018 IPR026033 Purine permease PbuG-like RK98_RS07115 c9d88fcf04ce51c214306296d746b3c7 351 Pfam PF13303 Phosphotransferase system, EIIC 15 348 6.6E-94 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS08035 f9741d02ca0ebc022b5e7e8ff25ef0e1 416 SUPERFAMILY SSF55729 1 164 1.06E-56 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS08035 f9741d02ca0ebc022b5e7e8ff25ef0e1 416 Pfam PF02388 FemAB family 6 412 5.3E-149 T 28-03-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 RK98_RS08035 f9741d02ca0ebc022b5e7e8ff25ef0e1 416 SUPERFAMILY SSF55729 166 244 4.24E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS08035 f9741d02ca0ebc022b5e7e8ff25ef0e1 416 SUPERFAMILY SSF55729 310 407 4.24E-35 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS08035 f9741d02ca0ebc022b5e7e8ff25ef0e1 416 Gene3D G3DSA:3.40.630.30 1 167 2.9E-30 T 28-03-2018 RK98_RS08035 f9741d02ca0ebc022b5e7e8ff25ef0e1 416 Gene3D G3DSA:3.40.630.30 168 389 1.0E-34 T 28-03-2018 RK98_RS08035 f9741d02ca0ebc022b5e7e8ff25ef0e1 416 SUPERFAMILY SSF46589 244 307 1.67E-15 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 RK98_RS05335 0d80a5fe4b25173c027d6e9708552c38 484 SUPERFAMILY SSF55604 7 81 2.75E-18 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS05335 0d80a5fe4b25173c027d6e9708552c38 484 Pfam PF02378 Phosphotransferase system, EIIC 134 415 5.2E-31 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS05335 0d80a5fe4b25173c027d6e9708552c38 484 Gene3D G3DSA:3.30.1360.60 5 81 1.0E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS05335 0d80a5fe4b25173c027d6e9708552c38 484 Pfam PF00367 phosphotransferase system, EIIB 10 42 6.5E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS05335 0d80a5fe4b25173c027d6e9708552c38 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS11670 384015ca302da8aa572c1d55c5fd2253 342 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 340 44.372 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RK98_RS11670 384015ca302da8aa572c1d55c5fd2253 342 SUPERFAMILY SSF56042 168 336 1.02E-57 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain RK98_RS11670 384015ca302da8aa572c1d55c5fd2253 342 Gene3D G3DSA:3.90.650.10 168 340 6.2E-61 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain RK98_RS11670 384015ca302da8aa572c1d55c5fd2253 342 Pfam PF02769 AIR synthase related protein, C-terminal domain 173 337 1.5E-37 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain RK98_RS11670 384015ca302da8aa572c1d55c5fd2253 342 Pfam PF00586 AIR synthase related protein, N-terminal domain 56 161 5.3E-16 T 28-03-2018 IPR016188 PurM-like, N-terminal domain RK98_RS11670 384015ca302da8aa572c1d55c5fd2253 342 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 331 3.6E-129 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 RK98_RS11670 384015ca302da8aa572c1d55c5fd2253 342 SUPERFAMILY SSF55326 4 166 4.04E-48 T 28-03-2018 IPR016188 PurM-like, N-terminal domain RK98_RS11670 384015ca302da8aa572c1d55c5fd2253 342 Gene3D G3DSA:3.30.1330.10 27 158 2.2E-51 T 28-03-2018 IPR016188 PurM-like, N-terminal domain RK98_RS04370 7dd47198fbf4c383a9f0ea887beafb2d 122 Pfam PF06486 Protein of unknown function (DUF1093) 40 110 1.1E-14 T 28-03-2018 IPR006542 Protein of unknown function DUF1093 RK98_RS04370 7dd47198fbf4c383a9f0ea887beafb2d 122 SUPERFAMILY SSF159121 35 121 1.57E-22 T 28-03-2018 IPR006542 Protein of unknown function DUF1093 RK98_RS04370 7dd47198fbf4c383a9f0ea887beafb2d 122 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 13 119 6.8E-18 T 28-03-2018 IPR006542 Protein of unknown function DUF1093 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 Pfam PF08264 Anticodon-binding domain of tRNA 395 536 9.7E-9 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 Pfam PF09334 tRNA synthetases class I (M) 6 371 7.7E-115 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 519 50.646 T 28-03-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 539 656 3.5E-41 T 28-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 492 1.3E-169 T 28-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 Gene3D G3DSA:1.10.730.10 356 524 9.7E-40 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 SUPERFAMILY SSF52374 3 358 2.05E-112 T 28-03-2018 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 Gene3D G3DSA:2.40.50.140 549 657 1.1E-28 T 28-03-2018 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 SUPERFAMILY SSF47323 361 570 1.64E-45 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 Pfam PF01588 Putative tRNA binding domain 564 654 2.5E-25 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 SUPERFAMILY SSF50249 557 654 1.4E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 Gene3D G3DSA:3.40.50.620 3 355 5.6E-101 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 3.1E-31 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 3.1E-31 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 PRINTS PR01041 Methionyl-tRNA synthetase signature 359 370 3.1E-31 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 3.1E-31 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 PRINTS PR01041 Methionyl-tRNA synthetase signature 234 245 3.1E-31 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RK98_RS03675 43b6c2f98e5635f1a3c82e87db82a91e 657 PRINTS PR01041 Methionyl-tRNA synthetase signature 267 282 3.1E-31 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 RK98_RS02230 7dfefc9519852133bdc13f39cd57c7f2 351 Pfam PF00953 Glycosyl transferase family 4 73 225 4.1E-41 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 RK98_RS02230 7dfefc9519852133bdc13f39cd57c7f2 351 ProSitePatterns PS01348 MraY family signature 2. 145 156 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RK98_RS11100 9f0439670ae900e9d4bd43df169f15c1 401 Gene3D G3DSA:1.20.5.470 362 394 7.1E-10 T 28-03-2018 RK98_RS11100 9f0439670ae900e9d4bd43df169f15c1 401 SUPERFAMILY SSF69864 169 394 8.37E-91 T 28-03-2018 RK98_RS11100 9f0439670ae900e9d4bd43df169f15c1 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 4 391 8.1E-158 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS11100 9f0439670ae900e9d4bd43df169f15c1 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 115 126 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS11100 9f0439670ae900e9d4bd43df169f15c1 401 Gene3D G3DSA:3.40.50.620 1 160 8.4E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS11100 9f0439670ae900e9d4bd43df169f15c1 401 SUPERFAMILY SSF52402 2 169 4.63E-45 T 28-03-2018 RK98_RS11100 9f0439670ae900e9d4bd43df169f15c1 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 8 16 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS11100 9f0439670ae900e9d4bd43df169f15c1 401 Gene3D G3DSA:3.90.1260.10 161 351 2.3E-83 T 28-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS11100 9f0439670ae900e9d4bd43df169f15c1 401 Pfam PF00764 Arginosuccinate synthase 6 389 4.3E-167 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS11100 9f0439670ae900e9d4bd43df169f15c1 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 2 395 53.039 T 28-03-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 RK98_RS06495 14fde24c3a487d086bca7ef234056cc9 272 SUPERFAMILY SSF55681 13 264 7.62E-17 T 28-03-2018 RK98_RS06495 14fde24c3a487d086bca7ef234056cc9 272 Pfam PF13393 Histidyl-tRNA synthetase 7 267 1.3E-18 T 28-03-2018 RK98_RS06495 14fde24c3a487d086bca7ef234056cc9 272 Gene3D G3DSA:3.30.930.10 5 105 6.1E-4 T 28-03-2018 RK98_RS06495 14fde24c3a487d086bca7ef234056cc9 272 Gene3D G3DSA:3.30.930.10 119 271 7.9E-6 T 28-03-2018 RK98_RS06495 14fde24c3a487d086bca7ef234056cc9 272 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 5 271 22.314 T 28-03-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 SUPERFAMILY SSF52540 3 303 1.79E-89 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 Gene3D G3DSA:3.40.50.300 1 80 3.0E-7 T 28-03-2018 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 365 44.789 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 Gene3D G3DSA:1.10.150.300 110 200 3.2E-31 T 28-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 SUPERFAMILY SSF81271 281 362 9.59E-37 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 Pfam PF01926 50S ribosome-binding GTPase 5 115 7.8E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 Pfam PF06071 Protein of unknown function (DUF933) 281 364 4.8E-40 T 28-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 PIRSF PIRSF006641 1 365 1.9E-162 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 Gene3D G3DSA:3.10.20.30 265 364 1.2E-45 T 28-03-2018 IPR012675 Beta-grasp domain RK98_RS04415 5aef7dbc9aebf9076c111c9b461cbd5c 365 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 365 1.1E-155 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 PRINTS PR01774 Exfoliative toxin signature 111 135 5.5E-13 T 28-03-2018 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 PRINTS PR01774 Exfoliative toxin signature 228 252 5.5E-13 T 28-03-2018 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 PRINTS PR01774 Exfoliative toxin signature 89 110 5.5E-13 T 28-03-2018 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 Gene3D G3DSA:2.40.10.10 203 286 2.7E-24 T 28-03-2018 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 ProSitePatterns PS00672 Serine proteases, V8 family, histidine active site. 105 119 - T 28-03-2018 IPR028301 Serine proteases, V8 family, histidine active site RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 Pfam PF13365 Trypsin-like peptidase domain 104 251 1.8E-20 T 28-03-2018 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 Gene3D G3DSA:2.40.10.10 20 202 1.1E-9 T 28-03-2018 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 SUPERFAMILY SSF50494 70 282 1.68E-50 T 28-03-2018 IPR009003 Peptidase S1, PA clan RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 PRINTS PR00839 V8 serine protease family signature 104 121 7.9E-37 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 PRINTS PR00839 V8 serine protease family signature 193 206 7.9E-37 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 PRINTS PR00839 V8 serine protease family signature 226 242 7.9E-37 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 PRINTS PR00839 V8 serine protease family signature 243 255 7.9E-37 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 PRINTS PR00839 V8 serine protease family signature 76 93 7.9E-37 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS11550 cf6a71490002d984303cbf35c57f0144 342 ProSitePatterns PS00673 Serine proteases, V8 family, serine active site. 232 242 - T 28-03-2018 IPR000126 Serine proteases, V8 family, serine active site GO:0006508|GO:0008236 RK98_RS07640 7e02fc92b40bde7a7e79fdde2a972aa3 136 Gene3D G3DSA:3.10.450.130 38 136 2.8E-24 T 28-03-2018 RK98_RS07640 7e02fc92b40bde7a7e79fdde2a972aa3 136 Pfam PF07252 Protein of unknown function (DUF1433) 39 131 1.6E-36 T 28-03-2018 IPR009881 Protein of unknown function DUF1433 RK98_RS05340 e6e7b97e7bd150d6a746d8c687bf72de 298 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 5 293 3.6E-106 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 RK98_RS05340 e6e7b97e7bd150d6a746d8c687bf72de 298 Gene3D G3DSA:1.10.8.10 266 294 0.005 T 28-03-2018 RK98_RS05340 e6e7b97e7bd150d6a746d8c687bf72de 298 Gene3D G3DSA:1.10.8.10 238 265 0.1 T 28-03-2018 RK98_RS05340 e6e7b97e7bd150d6a746d8c687bf72de 298 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 183 200 - T 28-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 RK98_RS05340 e6e7b97e7bd150d6a746d8c687bf72de 298 SUPERFAMILY SSF53697 5 244 1.31E-67 T 28-03-2018 RK98_RS05340 e6e7b97e7bd150d6a746d8c687bf72de 298 Gene3D G3DSA:3.40.50.10490 8 237 1.0E-47 T 28-03-2018 RK98_RS05340 e6e7b97e7bd150d6a746d8c687bf72de 298 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 1 293 40.079 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 SUPERFAMILY SSF52768 7 373 8.63E-101 T 28-03-2018 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 PRINTS PR01272 Acetoin utilisation ACUC protein signature 89 103 5.5E-40 T 28-03-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 PRINTS PR01272 Acetoin utilisation ACUC protein signature 354 373 5.5E-40 T 28-03-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 PRINTS PR01272 Acetoin utilisation ACUC protein signature 110 123 5.5E-40 T 28-03-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 PRINTS PR01272 Acetoin utilisation ACUC protein signature 19 39 5.5E-40 T 28-03-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 PRINTS PR01272 Acetoin utilisation ACUC protein signature 337 353 5.5E-40 T 28-03-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 PRINTS PR01272 Acetoin utilisation ACUC protein signature 277 293 5.5E-40 T 28-03-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 PRINTS PR01272 Acetoin utilisation ACUC protein signature 316 335 5.5E-40 T 28-03-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 PRINTS PR01270 Histone deacetylase superfamily signature 133 156 9.8E-17 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 PRINTS PR01270 Histone deacetylase superfamily signature 166 181 9.8E-17 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 PRINTS PR01270 Histone deacetylase superfamily signature 252 262 9.8E-17 T 28-03-2018 IPR000286 Histone deacetylase superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 Gene3D G3DSA:3.40.800.20 5 383 3.5E-88 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 RK98_RS00235 d006fefdbf0d0ac18d6d4b8899e0569f 389 Pfam PF00850 Histone deacetylase domain 25 321 2.5E-72 T 28-03-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 RK98_RS07745 009eb46b64fcbae10c1ce774c84ed31e 358 Gene3D G3DSA:3.40.630.10 156 357 5.0E-47 T 28-03-2018 RK98_RS07745 009eb46b64fcbae10c1ce774c84ed31e 358 SUPERFAMILY SSF53187 5 80 2.88E-70 T 28-03-2018 RK98_RS07745 009eb46b64fcbae10c1ce774c84ed31e 358 SUPERFAMILY SSF53187 172 354 2.88E-70 T 28-03-2018 RK98_RS07745 009eb46b64fcbae10c1ce774c84ed31e 358 Gene3D G3DSA:2.40.30.40 69 155 1.0E-35 T 28-03-2018 IPR023367 Peptidase M42, domain 2 RK98_RS07745 009eb46b64fcbae10c1ce774c84ed31e 358 SUPERFAMILY SSF101821 70 180 3.21E-35 T 28-03-2018 RK98_RS07745 009eb46b64fcbae10c1ce774c84ed31e 358 Pfam PF05343 M42 glutamyl aminopeptidase 45 340 7.6E-118 T 28-03-2018 IPR008007 Peptidase M42 RK98_RS07745 009eb46b64fcbae10c1ce774c84ed31e 358 PIRSF PIRSF001123 1 358 1.8E-154 T 28-03-2018 IPR008007 Peptidase M42 RK98_RS14405 caf91d1c04754a10f0408d8274692444 227 Gene3D G3DSA:2.40.50.140 164 227 1.4E-8 T 28-03-2018 RK98_RS14405 caf91d1c04754a10f0408d8274692444 227 SUPERFAMILY SSF141322 163 226 6.67E-6 T 28-03-2018 RK98_RS08620 b3baca6d89ff577df2090bf5ab086d82 166 Pfam PF05257 CHAP domain 61 140 2.8E-14 T 28-03-2018 IPR007921 CHAP domain RK98_RS08620 b3baca6d89ff577df2090bf5ab086d82 166 SUPERFAMILY SSF54001 36 164 3.43E-19 T 28-03-2018 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 Gene3D G3DSA:3.30.70.890 167 290 5.5E-22 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 Hamap MF_00384 Homoserine kinase [thrB]. 5 299 31.611 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 PRINTS PR00958 Homoserine kinase signature 96 111 1.3E-35 T 28-03-2018 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 PRINTS PR00958 Homoserine kinase signature 12 27 1.3E-35 T 28-03-2018 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 PRINTS PR00958 Homoserine kinase signature 250 265 1.3E-35 T 28-03-2018 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 PRINTS PR00958 Homoserine kinase signature 170 187 1.3E-35 T 28-03-2018 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 PRINTS PR00958 Homoserine kinase signature 130 143 1.3E-35 T 28-03-2018 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 SUPERFAMILY SSF55060 166 282 2.06E-31 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 TIGRFAM TIGR00191 thrB: homoserine kinase 6 298 3.5E-78 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 89 100 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 Pfam PF08544 GHMP kinases C terminal 208 281 2.3E-8 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 Gene3D G3DSA:3.30.230.10 5 166 7.1E-27 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 PIRSF PIRSF000676 1 301 3.3E-89 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 Pfam PF00288 GHMP kinases N terminal domain 83 143 3.0E-12 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 RK98_RS13095 1ea0b52fa5faf8ade9c46eff79aa82fd 304 SUPERFAMILY SSF54211 8 150 8.35E-30 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS05490 d26c57f1f089c14f6c3cecc2254e004b 185 Pfam PF02397 Bacterial sugar transferase 2 178 3.7E-61 T 28-03-2018 IPR003362 Bacterial sugar transferase RK98_RS04150 93695f48c8bd5713c09f2e1724a78995 394 Gene3D G3DSA:1.10.260.40 1 109 4.5E-12 T 28-03-2018 RK98_RS04150 93695f48c8bd5713c09f2e1724a78995 394 Pfam PF01381 Helix-turn-helix 11 58 3.2E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS04150 93695f48c8bd5713c09f2e1724a78995 394 SUPERFAMILY SSF47413 5 59 3.38E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS04150 93695f48c8bd5713c09f2e1724a78995 394 Pfam PF02486 Replication initiation factor 165 369 1.5E-67 T 28-03-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 RK98_RS04150 93695f48c8bd5713c09f2e1724a78995 394 SMART SM00530 10 65 1.2E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS12280 22d295f049c6b64dd8ee50ac97098bc3 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 141 7.8E-29 T 28-03-2018 IPR020603 MraZ domain RK98_RS12280 22d295f049c6b64dd8ee50ac97098bc3 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 4.2E-21 T 28-03-2018 IPR020603 MraZ domain RK98_RS12280 22d295f049c6b64dd8ee50ac97098bc3 143 SUPERFAMILY SSF89447 1 136 1.45E-53 T 28-03-2018 RK98_RS12280 22d295f049c6b64dd8ee50ac97098bc3 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 1.0E-67 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RK98_RS12280 22d295f049c6b64dd8ee50ac97098bc3 143 Gene3D G3DSA:2.10.260.10 73 123 1.8E-9 T 28-03-2018 RK98_RS12280 22d295f049c6b64dd8ee50ac97098bc3 143 Gene3D G3DSA:2.10.260.10 1 56 6.3E-4 T 28-03-2018 RK98_RS12280 22d295f049c6b64dd8ee50ac97098bc3 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 142 9.6E-56 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RK98_RS12280 22d295f049c6b64dd8ee50ac97098bc3 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 59.285 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 RK98_RS11260 db36601328d571546ca3923bb236068a 320 Gene3D G3DSA:1.10.3720.10 3 307 4.8E-42 T 28-03-2018 RK98_RS11260 db36601328d571546ca3923bb236068a 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 318 6.7E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS11260 db36601328d571546ca3923bb236068a 320 SUPERFAMILY SSF161098 93 306 1.57E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS01705 b01470f58f2b2a7106b165da28097d66 99 Gene3D G3DSA:3.40.1800.10 9 98 3.0E-14 T 28-03-2018 RK98_RS01705 b01470f58f2b2a7106b165da28097d66 99 SMART SM00507 18 81 4.9E-8 T 28-03-2018 IPR003615 HNH nuclease RK98_RS01705 b01470f58f2b2a7106b165da28097d66 99 Pfam PF01844 HNH endonuclease 31 86 1.0E-9 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 RK98_RS12100 aa4f6027d4fef1da9ea643b983b561a2 271 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 171 182 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RK98_RS12100 aa4f6027d4fef1da9ea643b983b561a2 271 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 25 133 6.0E-28 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RK98_RS12100 aa4f6027d4fef1da9ea643b983b561a2 271 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 27 249 1.8E-40 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 RK98_RS12100 aa4f6027d4fef1da9ea643b983b561a2 271 SUPERFAMILY SSF46548 130 256 4.71E-26 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 RK98_RS12100 aa4f6027d4fef1da9ea643b983b561a2 271 Gene3D G3DSA:3.10.20.30 15 127 2.8E-24 T 28-03-2018 IPR012675 Beta-grasp domain RK98_RS12100 aa4f6027d4fef1da9ea643b983b561a2 271 Pfam PF13183 4Fe-4S dicluster domain 167 242 8.8E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain RK98_RS12100 aa4f6027d4fef1da9ea643b983b561a2 271 SUPERFAMILY SSF54292 21 128 9.97E-22 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 RK98_RS12100 aa4f6027d4fef1da9ea643b983b561a2 271 Gene3D G3DSA:1.10.1060.10 128 259 1.8E-18 T 28-03-2018 RK98_RS03180 9737d6d86fb899b3a4cde8cab9998c21 252 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 121 139 - T 28-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RK98_RS03180 9737d6d86fb899b3a4cde8cab9998c21 252 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 16 227 1.1E-19 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 RK98_RS03180 9737d6d86fb899b3a4cde8cab9998c21 252 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 241 1.2E-73 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RK98_RS03180 9737d6d86fb899b3a4cde8cab9998c21 252 SUPERFAMILY SSF100950 1 239 1.16E-82 T 28-03-2018 RK98_RS03180 9737d6d86fb899b3a4cde8cab9998c21 252 Gene3D G3DSA:3.40.50.1360 1 248 2.3E-64 T 28-03-2018 RK98_RS03180 9737d6d86fb899b3a4cde8cab9998c21 252 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 242 41.605 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 RK98_RS11635 f2fdd7ed3dc3e6fce51a4f1a9a6ed28c 160 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.3 T 28-03-2018 IPR033747 Class I PurE RK98_RS11635 f2fdd7ed3dc3e6fce51a4f1a9a6ed28c 160 PIRSF PIRSF001338 1 160 8.7E-69 T 28-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 RK98_RS11635 f2fdd7ed3dc3e6fce51a4f1a9a6ed28c 160 SMART SM01001 1 152 2.7E-96 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RK98_RS11635 f2fdd7ed3dc3e6fce51a4f1a9a6ed28c 160 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 159 2.1E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RK98_RS11635 f2fdd7ed3dc3e6fce51a4f1a9a6ed28c 160 SUPERFAMILY SSF52255 2 159 7.46E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RK98_RS11635 f2fdd7ed3dc3e6fce51a4f1a9a6ed28c 160 Pfam PF00731 AIR carboxylase 2 148 5.3E-64 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RK98_RS11635 f2fdd7ed3dc3e6fce51a4f1a9a6ed28c 160 Gene3D G3DSA:3.40.50.7700 1 160 1.8E-66 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 RK98_RS11325 0c5c6c4dbdc92f99758e9d22c09b5836 284 Gene3D G3DSA:3.30.2350.10 75 273 2.5E-53 T 28-03-2018 RK98_RS11325 0c5c6c4dbdc92f99758e9d22c09b5836 284 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 126 140 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS11325 0c5c6c4dbdc92f99758e9d22c09b5836 284 Pfam PF00849 RNA pseudouridylate synthase 84 229 5.4E-25 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS11325 0c5c6c4dbdc92f99758e9d22c09b5836 284 SUPERFAMILY SSF55120 68 279 1.33E-59 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS10455 a9a4e130b504360846f3b1e612510b2b 64 Pfam PF05532 CsbD-like 4 52 7.5E-16 T 28-03-2018 IPR008462 CsbD-like domain RK98_RS10455 a9a4e130b504360846f3b1e612510b2b 64 SUPERFAMILY SSF69047 5 59 1.96E-11 T 28-03-2018 IPR008462 CsbD-like domain RK98_RS10455 a9a4e130b504360846f3b1e612510b2b 64 Gene3D G3DSA:1.10.1470.10 4 64 1.9E-15 T 28-03-2018 IPR008462 CsbD-like domain RK98_RS09930 8236da7193ebd778aa47d1e1d691f990 159 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 1 155 2.5E-82 T 28-03-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RK98_RS09930 8236da7193ebd778aa47d1e1d691f990 159 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 2 158 38.554 T 28-03-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 RK98_RS09930 8236da7193ebd778aa47d1e1d691f990 159 SUPERFAMILY SSF55874 35 137 1.02E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS09930 8236da7193ebd778aa47d1e1d691f990 159 Gene3D G3DSA:3.30.565.10 3 158 1.4E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS09930 8236da7193ebd778aa47d1e1d691f990 159 Pfam PF13581 Histidine kinase-like ATPase domain 12 142 4.3E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS14370 45d78892aa86d37b54980f56f3b2c09c 299 TIGRFAM TIGR00436 era: GTP-binding protein Era 7 277 1.1E-105 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14370 45d78892aa86d37b54980f56f3b2c09c 299 Gene3D G3DSA:3.40.50.300 55 177 5.2E-20 T 28-03-2018 RK98_RS14370 45d78892aa86d37b54980f56f3b2c09c 299 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 166 4.8E-28 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS14370 45d78892aa86d37b54980f56f3b2c09c 299 Gene3D G3DSA:3.30.300.20 183 297 2.1E-44 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta RK98_RS14370 45d78892aa86d37b54980f56f3b2c09c 299 Gene3D G3DSA:3.40.50.300 2 54 1.1E-12 T 28-03-2018 RK98_RS14370 45d78892aa86d37b54980f56f3b2c09c 299 Hamap MF_00367 GTPase Era [era]. 4 294 39.074 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14370 45d78892aa86d37b54980f56f3b2c09c 299 SUPERFAMILY SSF54814 179 294 1.62E-40 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 RK98_RS14370 45d78892aa86d37b54980f56f3b2c09c 299 Pfam PF07650 KH domain 206 283 4.4E-23 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS14370 45d78892aa86d37b54980f56f3b2c09c 299 SUPERFAMILY SSF52540 9 203 1.05E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14370 45d78892aa86d37b54980f56f3b2c09c 299 Pfam PF01926 50S ribosome-binding GTPase 9 123 1.6E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 714 794 2.3E-27 T 28-03-2018 IPR019489 Clp ATPase, C-terminal RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Gene3D G3DSA:1.10.1780.10 1 77 7.8E-22 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Pfam PF02151 UvrB/uvrC motif 417 452 1.3E-5 T 28-03-2018 IPR001943 UVR domain GO:0005515 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Gene3D G3DSA:3.40.50.300 192 342 2.4E-21 T 28-03-2018 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 571 589 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 SUPERFAMILY SSF81923 5 152 3.14E-31 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Gene3D G3DSA:3.40.50.300 492 713 4.6E-56 T 28-03-2018 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Gene3D G3DSA:1.10.8.60 714 818 6.3E-27 T 28-03-2018 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 SMART SM01086 714 803 4.7E-37 T 28-03-2018 IPR019489 Clp ATPase, C-terminal RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 SUPERFAMILY SSF52540 161 468 3.81E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 2.4E-14 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 8.8E-18 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 SMART SM00382 200 344 6.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 SMART SM00382 537 715 1.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Gene3D G3DSA:1.10.1780.10 78 191 3.9E-25 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 541 559 1.7E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 586 604 1.7E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 662 1.7E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 1.7E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Gene3D G3DSA:1.10.8.60 344 487 3.6E-44 T 28-03-2018 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Pfam PF07724 AAA domain (Cdc48 subfamily) 536 708 9.9E-56 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 334 3.7E-14 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 RK98_RS03420 5f36eddee1f9e45290fe1e2c87927756 818 SUPERFAMILY SSF52540 486 799 3.23E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07055 fa4062a9129c3bbb374d566dd10ea7b3 296 SUPERFAMILY SSF52540 2 180 1.91E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07055 fa4062a9129c3bbb374d566dd10ea7b3 296 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 180 1.4E-45 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RK98_RS07055 fa4062a9129c3bbb374d566dd10ea7b3 296 Gene3D G3DSA:3.40.50.300 1 195 1.0E-27 T 28-03-2018 RK98_RS07055 fa4062a9129c3bbb374d566dd10ea7b3 296 Gene3D G3DSA:3.30.1220.10 196 293 4.0E-8 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK98_RS07055 fa4062a9129c3bbb374d566dd10ea7b3 296 SUPERFAMILY SSF90002 225 289 3.79E-7 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK98_RS07055 fa4062a9129c3bbb374d566dd10ea7b3 296 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 219 291 8.7E-9 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK98_RS07365 f419945f00dd6699930f41686415f93d 223 Gene3D G3DSA:3.40.109.10 1 221 9.9E-42 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RK98_RS07365 f419945f00dd6699930f41686415f93d 223 Pfam PF00881 Nitroreductase family 14 198 8.6E-31 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 RK98_RS07365 f419945f00dd6699930f41686415f93d 223 SUPERFAMILY SSF55469 8 218 2.09E-55 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 RK98_RS06750 e2c22e0e8f26e210de26427ed18df981 234 SUPERFAMILY SSF51206 35 153 1.57E-19 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like RK98_RS06750 e2c22e0e8f26e210de26427ed18df981 234 Gene3D G3DSA:1.10.10.10 154 227 1.3E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06750 e2c22e0e8f26e210de26427ed18df981 234 Pfam PF13545 Crp-like helix-turn-helix domain 160 218 2.6E-7 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 RK98_RS06750 e2c22e0e8f26e210de26427ed18df981 234 SUPERFAMILY SSF46785 158 224 1.27E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06750 e2c22e0e8f26e210de26427ed18df981 234 Gene3D G3DSA:2.60.120.10 9 153 1.5E-11 T 28-03-2018 IPR014710 RmlC-like jelly roll fold RK98_RS06750 e2c22e0e8f26e210de26427ed18df981 234 Pfam PF00027 Cyclic nucleotide-binding domain 41 125 1.8E-6 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 SUPERFAMILY SSF56719 28 481 8.5E-167 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 606 647 0.01 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 656 693 0.0016 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 547 594 0.0071 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 702 750 0.0029 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 504 537 0.016 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 468 3.1E-151 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 5 742 0.0 T 28-03-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Gene3D G3DSA:1.10.268.10 341 483 1.5E-45 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 SUPERFAMILY SSF101904 497 799 3.92E-81 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Gene3D G3DSA:2.120.10.90 497 799 1.9E-69 T 28-03-2018 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Gene3D G3DSA:3.90.199.10 31 212 5.0E-76 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 4 800 33.3 T 28-03-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 Gene3D G3DSA:3.30.1360.40 233 329 9.2E-32 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 RK98_RS13245 7bac2973f88fa4faf210b11dce4183e7 800 SMART SM00434 8 461 9.8E-264 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 RK98_RS08945 6eeb1b2a19200bf9ac8495f2bd3821cf 217 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 37.719 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RK98_RS08945 6eeb1b2a19200bf9ac8495f2bd3821cf 217 SUPERFAMILY SSF54814 2 105 3.66E-38 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 RK98_RS08945 6eeb1b2a19200bf9ac8495f2bd3821cf 217 SUPERFAMILY SSF54821 106 205 1.44E-37 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08945 6eeb1b2a19200bf9ac8495f2bd3821cf 217 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 2.8E-38 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08945 6eeb1b2a19200bf9ac8495f2bd3821cf 217 Pfam PF07650 KH domain 37 108 9.7E-21 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08945 6eeb1b2a19200bf9ac8495f2bd3821cf 217 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 28-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08945 6eeb1b2a19200bf9ac8495f2bd3821cf 217 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 3.0E-93 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 RK98_RS08945 6eeb1b2a19200bf9ac8495f2bd3821cf 217 Gene3D G3DSA:3.30.1140.32 107 206 1.3E-35 T 28-03-2018 RK98_RS08945 6eeb1b2a19200bf9ac8495f2bd3821cf 217 Gene3D G3DSA:3.30.300.20 17 106 9.8E-31 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta RK98_RS08945 6eeb1b2a19200bf9ac8495f2bd3821cf 217 SMART SM00322 59 124 3.0E-10 T 28-03-2018 IPR004087 K Homology domain GO:0003676 RK98_RS04885 5ef3aa8ca61730fbd87ac1f350b59078 330 SUPERFAMILY SSF56235 2 327 2.78E-97 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS04885 5ef3aa8ca61730fbd87ac1f350b59078 330 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 314 5.4E-74 T 28-03-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal RK98_RS04885 5ef3aa8ca61730fbd87ac1f350b59078 330 Gene3D G3DSA:3.60.60.10 2 330 4.4E-77 T 28-03-2018 RK98_RS08425 0ae501b6cac5b75ee233ae62299b3ef9 410 Pfam PF12698 ABC-2 family transporter protein 19 386 6.5E-50 T 28-03-2018 RK98_RS08425 0ae501b6cac5b75ee233ae62299b3ef9 410 Gene3D G3DSA:3.40.190.10 46 155 1.2E-8 T 28-03-2018 RK98_RS02410 c9e0076ddd29ae6ddadc4ee0621909a4 236 SMART SM00796 1 209 6.2E-61 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D RK98_RS02410 c9e0076ddd29ae6ddadc4ee0621909a4 236 SUPERFAMILY SSF50891 95 225 1.82E-32 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS02410 c9e0076ddd29ae6ddadc4ee0621909a4 236 SUPERFAMILY SSF160467 2 99 6.54E-13 T 28-03-2018 RK98_RS02410 c9e0076ddd29ae6ddadc4ee0621909a4 236 Gene3D G3DSA:2.40.100.10 95 227 1.9E-32 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS02410 c9e0076ddd29ae6ddadc4ee0621909a4 236 Gene3D G3DSA:3.30.1360.40 1 94 5.3E-7 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 RK98_RS02410 c9e0076ddd29ae6ddadc4ee0621909a4 236 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 1 206 3.6E-40 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D RK98_RS00835 594b0bb8b5e7ac1aa18dd1e8c7c9b9fb 978 Gene3D G3DSA:3.40.50.300 1 297 1.1E-11 T 28-03-2018 RK98_RS00835 594b0bb8b5e7ac1aa18dd1e8c7c9b9fb 978 Pfam PF13514 AAA domain 1 207 2.8E-24 T 28-03-2018 RK98_RS00835 594b0bb8b5e7ac1aa18dd1e8c7c9b9fb 978 SUPERFAMILY SSF52540 751 955 4.78E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS00835 594b0bb8b5e7ac1aa18dd1e8c7c9b9fb 978 SUPERFAMILY SSF52540 880 969 5.84E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS00835 594b0bb8b5e7ac1aa18dd1e8c7c9b9fb 978 SUPERFAMILY SSF52540 1 212 5.84E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS00835 594b0bb8b5e7ac1aa18dd1e8c7c9b9fb 978 Gene3D G3DSA:3.40.50.300 723 975 1.8E-10 T 28-03-2018 RK98_RS00835 594b0bb8b5e7ac1aa18dd1e8c7c9b9fb 978 Gene3D G3DSA:1.20.120.330 512 722 0.0024 T 28-03-2018 RK98_RS03185 57db94e5e53bc3394f8a89b539aa94ef 120 Pfam PF08830 Protein of unknown function (DUF1806) 4 118 2.0E-48 T 28-03-2018 IPR014934 Protein of unknown function DUF1806 RK98_RS03185 57db94e5e53bc3394f8a89b539aa94ef 120 SUPERFAMILY SSF89442 2 119 4.18E-47 T 28-03-2018 IPR014934 Protein of unknown function DUF1806 RK98_RS03185 57db94e5e53bc3394f8a89b539aa94ef 120 Gene3D G3DSA:2.70.180.10 2 118 3.1E-47 T 28-03-2018 IPR014934 Protein of unknown function DUF1806 RK98_RS12840 589927a37dd619245578156e34b1b390 383 SMART SM00852 4 171 2.1E-34 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS12840 589927a37dd619245578156e34b1b390 383 PIRSF PIRSF006728 1 383 2.2E-122 T 28-03-2018 IPR008135 Competence-induced protein CinA RK98_RS12840 589927a37dd619245578156e34b1b390 383 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 383 100.837 T 28-03-2018 IPR008135 Competence-induced protein CinA RK98_RS12840 589927a37dd619245578156e34b1b390 383 Pfam PF00994 Probable molybdopterin binding domain 4 164 5.2E-34 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS12840 589927a37dd619245578156e34b1b390 383 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 164 1.9E-32 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS12840 589927a37dd619245578156e34b1b390 383 Gene3D G3DSA:3.40.980.10 1 172 2.0E-42 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS12840 589927a37dd619245578156e34b1b390 383 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 2 266 1.4E-85 T 28-03-2018 IPR008135 Competence-induced protein CinA RK98_RS12840 589927a37dd619245578156e34b1b390 383 SUPERFAMILY SSF53218 1 203 1.83E-37 T 28-03-2018 IPR001453 MoaB/Mog domain RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 SUPERFAMILY SSF48163 298 482 4.84E-46 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 7.5E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 7.5E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 7.5E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 7.5E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 7.5E-27 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 482 3.5E-188 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 SUPERFAMILY SSF52374 5 316 3.49E-112 T 28-03-2018 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 323 2.8E-124 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 Gene3D G3DSA:3.40.50.620 5 130 2.5E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 Gene3D G3DSA:1.10.1160.10 247 333 1.8E-31 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 Gene3D G3DSA:3.40.50.620 131 246 8.6E-29 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 Gene3D G3DSA:1.10.10.350 386 484 1.0E-27 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RK98_RS03405 68027aa9903cffc98e4972ff0f8cfc71 484 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 484 33.738 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 RK98_RS03160 372e12eee8d768ca4d187f3ac0711285 466 Pfam PF07690 Major Facilitator Superfamily 65 359 4.8E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS03160 372e12eee8d768ca4d187f3ac0711285 466 Gene3D G3DSA:1.20.1250.20 241 441 1.5E-26 T 28-03-2018 RK98_RS03160 372e12eee8d768ca4d187f3ac0711285 466 SUPERFAMILY SSF103473 15 435 5.75E-70 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS03160 372e12eee8d768ca4d187f3ac0711285 466 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 RK98_RS03160 372e12eee8d768ca4d187f3ac0711285 466 Gene3D G3DSA:1.20.1250.20 15 228 3.1E-22 T 28-03-2018 RK98_RS10825 49571fb8e75ebd1b46c07ffbec161deb 145 Pfam PF04531 Bacteriophage holin 3 82 3.7E-27 T 28-03-2018 IPR006485 Bacteriophage holin RK98_RS10825 49571fb8e75ebd1b46c07ffbec161deb 145 TIGRFAM TIGR01598 holin_phiLC3: holin, phage phi LC3 family 3 81 3.1E-35 T 28-03-2018 IPR006485 Bacteriophage holin RK98_RS13520 1b6bc69f3f92e2af66d18cb021309c76 378 PIRSF PIRSF026508 1 377 7.0E-126 T 28-03-2018 IPR008863 Toxic anion resistance RK98_RS13520 1b6bc69f3f92e2af66d18cb021309c76 378 Pfam PF05816 Toxic anion resistance protein (TelA) 40 368 2.3E-118 T 28-03-2018 IPR008863 Toxic anion resistance RK98_RS11750 dd33049b02a348936df064a5f315e63a 453 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 435 1.1E-128 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 RK98_RS11750 dd33049b02a348936df064a5f315e63a 453 PIRSF PIRSF006446 1 453 2.1E-133 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 RK98_RS11600 5b340830ba7ffae439454bd2ceb9ce5d 96 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 5 91 1.0E-30 T 28-03-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 RK98_RS11600 5b340830ba7ffae439454bd2ceb9ce5d 96 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 8 81 9.1E-12 T 28-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 RK98_RS09645 c4cafef1dcb3735f2c8756b933fdce53 365 Pfam PF01300 Telomere recombination 45 220 4.5E-53 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 RK98_RS09645 c4cafef1dcb3735f2c8756b933fdce53 365 SUPERFAMILY SSF55821 31 227 1.07E-60 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain RK98_RS09645 c4cafef1dcb3735f2c8756b933fdce53 365 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 33 230 3.2E-58 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 RK98_RS09645 c4cafef1dcb3735f2c8756b933fdce53 365 Pfam PF03481 Putative GTP-binding controlling metal-binding 222 356 3.2E-21 T 28-03-2018 IPR005145 Putative GTP-binding controlling metal-binding domain RK98_RS09645 c4cafef1dcb3735f2c8756b933fdce53 365 PIRSF PIRSF004930 18 362 1.5E-117 T 28-03-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 RK98_RS09645 c4cafef1dcb3735f2c8756b933fdce53 365 Gene3D G3DSA:3.90.870.10 20 236 1.5E-68 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain RK98_RS08830 00ea5027d0b7e5ef621e21ce16aaa2a6 146 Gene3D G3DSA:1.10.10.10 2 143 1.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08830 00ea5027d0b7e5ef621e21ce16aaa2a6 146 SUPERFAMILY SSF46785 3 141 8.4E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08830 00ea5027d0b7e5ef621e21ce16aaa2a6 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 62 96 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site RK98_RS08830 00ea5027d0b7e5ef621e21ce16aaa2a6 146 SMART SM00347 23 125 3.5E-13 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS08830 00ea5027d0b7e5ef621e21ce16aaa2a6 146 Pfam PF01047 MarR family 32 87 1.6E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS13010 6df020ee800243237b6d1b410c843302 78 Pfam PF04233 Phage Mu protein F like protein 21 71 1.1E-10 T 28-03-2018 IPR006528 Phage head morphogenesis domain RK98_RS13010 6df020ee800243237b6d1b410c843302 78 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 24 75 7.5E-21 T 28-03-2018 IPR006528 Phage head morphogenesis domain RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 1.7E-81 T 28-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 Pfam PF00406 Adenylate kinase 5 190 1.9E-60 T 28-03-2018 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 Pfam PF05191 Adenylate kinase, active site lid 127 162 4.8E-18 T 28-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 28-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 PRINTS PR00094 Adenylate kinase signature 32 46 1.4E-32 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 PRINTS PR00094 Adenylate kinase signature 160 175 1.4E-32 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 PRINTS PR00094 Adenylate kinase signature 81 97 1.4E-32 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 PRINTS PR00094 Adenylate kinase signature 177 191 1.4E-32 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 PRINTS PR00094 Adenylate kinase signature 4 17 1.4E-32 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 Hamap MF_00235 Adenylate kinase [adk]. 1 213 53.219 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 Gene3D G3DSA:3.40.50.300 1 215 9.0E-68 T 28-03-2018 RK98_RS09020 dc6960b94793e49a37fa05c8adf0c743 215 SUPERFAMILY SSF52540 1 214 3.15E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05695 dd23e420e08a17ffee7e0719adda7c93 258 SUPERFAMILY SSF51621 5 252 5.23E-70 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RK98_RS05695 dd23e420e08a17ffee7e0719adda7c93 258 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 209 2.0E-30 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 RK98_RS05695 dd23e420e08a17ffee7e0719adda7c93 258 Gene3D G3DSA:3.20.20.60 1 254 1.6E-38 T 28-03-2018 RK98_RS02600 c8b16b21ba71884aa1aa42da39bc24e7 180 Pfam PF13302 Acetyltransferase (GNAT) domain 8 152 5.4E-26 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS02600 c8b16b21ba71884aa1aa42da39bc24e7 180 SUPERFAMILY SSF55729 1 157 1.55E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS02600 c8b16b21ba71884aa1aa42da39bc24e7 180 Gene3D G3DSA:3.40.630.30 3 176 5.4E-19 T 28-03-2018 RK98_RS13795 b01f0a2c70afd720e126aac227ef7c6e 380 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 1 371 3.9E-167 T 28-03-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 RK98_RS13795 b01f0a2c70afd720e126aac227ef7c6e 380 SUPERFAMILY SSF53756 6 375 2.63E-77 T 28-03-2018 RK98_RS13795 b01f0a2c70afd720e126aac227ef7c6e 380 Pfam PF00534 Glycosyl transferases group 1 187 345 1.0E-37 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 RK98_RS13795 b01f0a2c70afd720e126aac227ef7c6e 380 Pfam PF13439 Glycosyltransferase Family 4 11 174 1.8E-19 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 RK98_RS13795 b01f0a2c70afd720e126aac227ef7c6e 380 Gene3D G3DSA:3.40.50.2000 1 185 1.9E-12 T 28-03-2018 RK98_RS13795 b01f0a2c70afd720e126aac227ef7c6e 380 Gene3D G3DSA:3.40.50.2000 186 354 2.2E-39 T 28-03-2018 RK98_RS12005 240951a36e8560476ebb1ed5cebf2fc1 244 PIRSF PIRSF030150 1 242 6.3E-98 T 28-03-2018 IPR015986 Sortase B, Firmicutes RK98_RS12005 240951a36e8560476ebb1ed5cebf2fc1 244 TIGRFAM TIGR03064 sortase_srtB: sortase, SrtB family 4 236 1.5E-91 T 28-03-2018 IPR009835 Sortase B family RK98_RS12005 240951a36e8560476ebb1ed5cebf2fc1 244 Gene3D G3DSA:2.40.260.10 56 241 2.7E-60 T 28-03-2018 IPR023365 Sortase domain RK98_RS12005 240951a36e8560476ebb1ed5cebf2fc1 244 SUPERFAMILY SSF63817 12 243 9.68E-85 T 28-03-2018 IPR023365 Sortase domain RK98_RS12005 240951a36e8560476ebb1ed5cebf2fc1 244 Pfam PF04203 Sortase family 75 239 9.1E-25 T 28-03-2018 IPR005754 Sortase family RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 Gene3D G3DSA:3.10.20.120 120 239 4.8E-30 T 28-03-2018 RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 PRINTS PR01898 Bacterial superantigen superfamily signature 167 180 1.3E-5 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 PRINTS PR01898 Bacterial superantigen superfamily signature 180 194 1.3E-5 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 PRINTS PR01898 Bacterial superantigen superfamily signature 92 118 1.3E-5 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 PRINTS PR01898 Bacterial superantigen superfamily signature 125 138 1.3E-5 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 167 190 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 PRINTS PR01800 Staphylococcus aureus exotoxin signature 127 138 8.1E-7 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 PRINTS PR01800 Staphylococcus aureus exotoxin signature 205 220 8.1E-7 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 PRINTS PR01800 Staphylococcus aureus exotoxin signature 166 182 8.1E-7 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 SUPERFAMILY SSF54334 138 237 5.89E-28 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS12215 a8696762be22d0e2a376e42de8bf877d 241 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 151 229 2.1E-7 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS12375 bb5db51eb60251a9d94ea21e40949ad1 163 ProSitePatterns PS00855 Signal peptidases II signature. 99 111 - T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RK98_RS12375 bb5db51eb60251a9d94ea21e40949ad1 163 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 5 157 17.502 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RK98_RS12375 bb5db51eb60251a9d94ea21e40949ad1 163 TIGRFAM TIGR00077 lspA: signal peptidase II 11 159 3.5E-40 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RK98_RS12375 bb5db51eb60251a9d94ea21e40949ad1 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 96 111 2.8E-18 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RK98_RS12375 bb5db51eb60251a9d94ea21e40949ad1 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 2.8E-18 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RK98_RS12375 bb5db51eb60251a9d94ea21e40949ad1 163 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 132 148 2.8E-18 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RK98_RS12375 bb5db51eb60251a9d94ea21e40949ad1 163 Pfam PF01252 Signal peptidase (SPase) II 13 151 6.0E-36 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 RK98_RS02750 27f6e7251127c5d0346eec30672d71ce 194 SMART SM01120 30 189 4.8E-56 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RK98_RS02750 27f6e7251127c5d0346eec30672d71ce 194 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 7 188 5.0E-72 T 28-03-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 RK98_RS02750 27f6e7251127c5d0346eec30672d71ce 194 Pfam PF02734 DAK2 domain 30 187 4.7E-43 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RK98_RS02750 27f6e7251127c5d0346eec30672d71ce 194 SUPERFAMILY SSF101473 3 188 1.29E-50 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RK98_RS11745 9908a184c3a98df451deb34b341ec716 77 SUPERFAMILY SSF52833 3 71 5.63E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS11745 9908a184c3a98df451deb34b341ec716 77 Pfam PF00462 Glutaredoxin 4 58 1.7E-9 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 RK98_RS11745 9908a184c3a98df451deb34b341ec716 77 Gene3D G3DSA:3.40.30.10 1 76 1.2E-12 T 28-03-2018 RK98_RS13190 3f1c73c4a3acf62ebed39e00a0ae1efd 1009 SUPERFAMILY SSF75712 456 571 8.24E-5 T 28-03-2018 RK98_RS13190 3f1c73c4a3acf62ebed39e00a0ae1efd 1009 Gene3D G3DSA:1.10.287.510 448 583 2.5E-7 T 28-03-2018 RK98_RS13190 3f1c73c4a3acf62ebed39e00a0ae1efd 1009 SUPERFAMILY SSF52540 1 243 1.42E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13190 3f1c73c4a3acf62ebed39e00a0ae1efd 1009 Pfam PF13476 AAA domain 6 213 1.3E-26 T 28-03-2018 RK98_RS13190 3f1c73c4a3acf62ebed39e00a0ae1efd 1009 Pfam PF13558 Putative exonuclease SbcCD, C subunit 899 966 1.1E-12 T 28-03-2018 RK98_RS13190 3f1c73c4a3acf62ebed39e00a0ae1efd 1009 Gene3D G3DSA:3.40.50.300 1 190 2.0E-24 T 28-03-2018 RK98_RS13190 3f1c73c4a3acf62ebed39e00a0ae1efd 1009 SUPERFAMILY SSF52540 1 55 1.07E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13190 3f1c73c4a3acf62ebed39e00a0ae1efd 1009 SUPERFAMILY SSF52540 817 986 1.07E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13190 3f1c73c4a3acf62ebed39e00a0ae1efd 1009 Gene3D G3DSA:3.40.50.300 639 1008 1.3E-13 T 28-03-2018 RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 SUPERFAMILY SSF46785 6 77 3.75E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 Gene3D G3DSA:3.40.50.1360 71 238 1.3E-41 T 28-03-2018 RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 Pfam PF08220 DeoR-like helix-turn-helix domain 8 62 5.4E-16 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 26 40 7.7E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 40 58 7.7E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 SMART SM01134 75 233 3.3E-65 T 28-03-2018 RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 SMART SM00420 8 60 2.3E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 SUPERFAMILY SSF100950 76 232 1.03E-34 T 28-03-2018 RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 Pfam PF00455 DeoR C terminal sensor domain 77 231 2.9E-48 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain RK98_RS02505 f03ea005bed36edaefff6286bbc70e92 254 Gene3D G3DSA:1.10.10.10 1 70 7.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03425 1a05b36345f56dc1906bdc6904dff640 335 ProSitePatterns PS00112 Phosphagen kinase active site signature. 157 163 - T 28-03-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 RK98_RS03425 1a05b36345f56dc1906bdc6904dff640 335 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 52 243 1.9E-66 T 28-03-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 RK98_RS03425 1a05b36345f56dc1906bdc6904dff640 335 SUPERFAMILY SSF55931 2 262 1.35E-79 T 28-03-2018 RK98_RS03425 1a05b36345f56dc1906bdc6904dff640 335 Gene3D G3DSA:3.30.590.10 2 245 1.2E-72 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 RK98_RS03425 1a05b36345f56dc1906bdc6904dff640 335 Hamap MF_00602 Protein-arginine kinase [mcsB]. 11 335 36.149 T 28-03-2018 IPR023660 Protein arginine kinase GO:0006950|GO:0016775 RK98_RS01195 14815aaf8939c223a291f5a38954679b 154 SMART SM00226 2 144 6.1E-39 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily RK98_RS01195 14815aaf8939c223a291f5a38954679b 154 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 141 1.3E-35 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily RK98_RS01195 14815aaf8939c223a291f5a38954679b 154 Gene3D G3DSA:3.40.50.2300 1 153 2.4E-46 T 28-03-2018 RK98_RS01195 14815aaf8939c223a291f5a38954679b 154 SUPERFAMILY SSF52788 1 145 4.97E-43 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily RK98_RS01195 14815aaf8939c223a291f5a38954679b 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 78 93 1.4E-18 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RK98_RS01195 14815aaf8939c223a291f5a38954679b 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 118 133 1.4E-18 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RK98_RS01195 14815aaf8939c223a291f5a38954679b 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.4E-18 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RK98_RS01195 14815aaf8939c223a291f5a38954679b 154 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 1.4E-18 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 RK98_RS02400 90a5ecb173279f3d73cf5390113e4c29 646 Gene3D G3DSA:3.40.720.10 239 549 3.2E-38 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RK98_RS02400 90a5ecb173279f3d73cf5390113e4c29 646 PIRSF PIRSF005091 1 624 2.4E-178 T 28-03-2018 IPR012160 Lipoteichoic acid synthase-like RK98_RS02400 90a5ecb173279f3d73cf5390113e4c29 646 Pfam PF00884 Sulfatase 247 539 2.3E-32 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 RK98_RS02400 90a5ecb173279f3d73cf5390113e4c29 646 SUPERFAMILY SSF53649 245 637 1.03E-70 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RK98_RS11430 ff7114ef95187a304c81cbf33ca5eaf0 328 Pfam PF03099 Biotin/lipoate A/B protein ligase family 47 154 1.1E-8 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RK98_RS11430 ff7114ef95187a304c81cbf33ca5eaf0 328 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 320 1.8E-115 T 28-03-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 RK98_RS11430 ff7114ef95187a304c81cbf33ca5eaf0 328 Gene3D G3DSA:3.30.390.50 247 328 6.4E-25 T 28-03-2018 RK98_RS11430 ff7114ef95187a304c81cbf33ca5eaf0 328 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 243 326 6.1E-27 T 28-03-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 RK98_RS11430 ff7114ef95187a304c81cbf33ca5eaf0 328 Gene3D G3DSA:3.30.930.10 2 246 3.8E-70 T 28-03-2018 RK98_RS11430 ff7114ef95187a304c81cbf33ca5eaf0 328 SUPERFAMILY SSF82649 242 327 5.75E-25 T 28-03-2018 RK98_RS11430 ff7114ef95187a304c81cbf33ca5eaf0 328 SUPERFAMILY SSF55681 4 241 3.34E-79 T 28-03-2018 RK98_RS05975 10f11830630cbd9622c000c49041ec0c 231 SMART SM00862 148 227 1.8E-14 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS05975 10f11830630cbd9622c000c49041ec0c 231 Gene3D G3DSA:3.40.50.2300 1 122 1.6E-32 T 28-03-2018 RK98_RS05975 10f11830630cbd9622c000c49041ec0c 231 SUPERFAMILY SSF52172 3 184 7.83E-38 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS05975 10f11830630cbd9622c000c49041ec0c 231 Pfam PF00072 Response regulator receiver domain 6 114 2.5E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS05975 10f11830630cbd9622c000c49041ec0c 231 SMART SM00448 3 113 4.0E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS05975 10f11830630cbd9622c000c49041ec0c 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 227 8.9E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS05975 10f11830630cbd9622c000c49041ec0c 231 Gene3D G3DSA:1.10.10.10 123 231 9.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04945 23481a5f2030b7f6827270de2f0f8de6 263 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 116 236 3.6E-38 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS04945 23481a5f2030b7f6827270de2f0f8de6 263 Gene3D G3DSA:2.70.70.10 103 262 1.1E-48 T 28-03-2018 RK98_RS04945 23481a5f2030b7f6827270de2f0f8de6 263 SUPERFAMILY SSF55604 8 82 3.66E-5 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS04945 23481a5f2030b7f6827270de2f0f8de6 263 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 178 190 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS04945 23481a5f2030b7f6827270de2f0f8de6 263 SUPERFAMILY SSF51261 105 260 1.15E-46 T 28-03-2018 IPR011055 Duplicated hybrid motif RK98_RS04945 23481a5f2030b7f6827270de2f0f8de6 263 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 115 239 3.1E-44 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS04945 23481a5f2030b7f6827270de2f0f8de6 263 Gene3D G3DSA:3.30.1360.60 6 82 7.2E-8 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 Gene3D G3DSA:1.10.260.40 3 53 1.5E-17 T 28-03-2018 RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.8E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.8E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 SUPERFAMILY SSF53822 57 315 9.6E-55 T 28-03-2018 IPR028082 Periplasmic binding protein-like I RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 Pfam PF13407 Periplasmic binding protein domain 64 303 3.0E-17 T 28-03-2018 IPR025997 Periplasmic binding protein RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 SUPERFAMILY SSF47413 2 58 1.59E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 Gene3D G3DSA:3.40.50.2300 54 171 1.0E-25 T 28-03-2018 RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 47 1.5E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 Gene3D G3DSA:3.40.50.2300 172 306 4.6E-20 T 28-03-2018 RK98_RS10085 c2c6e25ab3e787bbbafab0c472b825fd 316 SMART SM00354 1 70 4.3E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 561 5.2E-224 T 28-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 SUPERFAMILY SSF52954 459 565 3.27E-26 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 Gene3D G3DSA:3.40.50.800 457 567 8.8E-28 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 Gene3D G3DSA:3.30.930.10 11 456 4.3E-94 T 28-03-2018 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 Pfam PF03129 Anticodon binding domain 474 561 1.7E-16 T 28-03-2018 IPR004154 Anticodon-binding RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.4E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.4E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.4E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.4E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 564 39.97 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 3.1E-53 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 Pfam PF04073 Aminoacyl-tRNA editing domain 257 375 2.8E-27 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 SUPERFAMILY SSF55826 218 385 1.11E-33 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 SUPERFAMILY SSF55681 403 473 2.31E-96 T 28-03-2018 RK98_RS12725 8f98f8bd565e20b86d36d8ab8623ec8d 567 SUPERFAMILY SSF55681 10 237 2.31E-96 T 28-03-2018 RK98_RS05235 9238c52c12632130f00ae84b62d19278 192 SUPERFAMILY SSF51261 54 179 3.79E-40 T 28-03-2018 IPR011055 Duplicated hybrid motif RK98_RS05235 9238c52c12632130f00ae84b62d19278 192 Pfam PF01551 Peptidase family M23 75 166 2.3E-27 T 28-03-2018 IPR016047 Peptidase M23 RK98_RS05235 9238c52c12632130f00ae84b62d19278 192 Gene3D G3DSA:2.70.70.10 27 182 3.9E-36 T 28-03-2018 RK98_RS00335 4847041edb1bf29f7e9807cd0b1216ab 231 Pfam PF01479 S4 domain 1 46 9.7E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS00335 4847041edb1bf29f7e9807cd0b1216ab 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 222 2.0E-45 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 RK98_RS00335 4847041edb1bf29f7e9807cd0b1216ab 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 RK98_RS00335 4847041edb1bf29f7e9807cd0b1216ab 231 SMART SM00363 1 59 2.0E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS00335 4847041edb1bf29f7e9807cd0b1216ab 231 Gene3D G3DSA:3.10.290.10 1 72 2.4E-18 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS00335 4847041edb1bf29f7e9807cd0b1216ab 231 SUPERFAMILY SSF55120 61 225 1.58E-43 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS00335 4847041edb1bf29f7e9807cd0b1216ab 231 Gene3D G3DSA:3.30.2350.10 73 228 9.8E-36 T 28-03-2018 RK98_RS00335 4847041edb1bf29f7e9807cd0b1216ab 231 Pfam PF00849 RNA pseudouridylate synthase 62 189 9.3E-18 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS00335 4847041edb1bf29f7e9807cd0b1216ab 231 SUPERFAMILY SSF55174 1 59 4.91E-14 T 28-03-2018 RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 143 202 3.3E-6 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 Gene3D G3DSA:3.10.20.120 113 227 4.3E-38 T 28-03-2018 RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 189 205 3.7E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 215 227 3.7E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 164 186 3.7E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 16 34 3.7E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 SUPERFAMILY SSF54334 129 227 4.19E-31 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 156 179 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01800 Staphylococcus aureus exotoxin signature 195 210 6.5E-25 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 6.5E-25 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01800 Staphylococcus aureus exotoxin signature 112 123 6.5E-25 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01800 Staphylococcus aureus exotoxin signature 155 171 6.5E-25 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 41 121 2.1E-19 T 28-03-2018 IPR015282 Staphylococcal superantigen-like OB-fold domain RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 Gene3D G3DSA:2.40.50.110 51 112 2.0E-23 T 28-03-2018 RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01898 Bacterial superantigen superfamily signature 169 183 4.2E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01898 Bacterial superantigen superfamily signature 156 169 4.2E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01898 Bacterial superantigen superfamily signature 110 123 4.2E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 PRINTS PR01898 Bacterial superantigen superfamily signature 210 226 4.2E-15 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04010 abfe8cc85c0d01f67b488c0335d8070e 227 SUPERFAMILY SSF50203 32 122 3.3E-26 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS11675 93d6ad9d08d139c4e85beaa0efc562e3 188 Gene3D G3DSA:3.40.50.170 1 188 1.3E-61 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RK98_RS11675 93d6ad9d08d139c4e85beaa0efc562e3 188 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 27.305 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 RK98_RS11675 93d6ad9d08d139c4e85beaa0efc562e3 188 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 187 1.5E-63 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 RK98_RS11675 93d6ad9d08d139c4e85beaa0efc562e3 188 Pfam PF00551 Formyl transferase 3 183 1.4E-55 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RK98_RS11675 93d6ad9d08d139c4e85beaa0efc562e3 188 SUPERFAMILY SSF53328 3 187 1.57E-56 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RK98_RS00540 56a51922c4f9d9c8b8b598bf80e57c99 216 Pfam PF05901 Excalibur calcium-binding domain 177 212 1.3E-11 T 28-03-2018 IPR008613 Excalibur calcium-binding domain RK98_RS00540 56a51922c4f9d9c8b8b598bf80e57c99 216 SMART SM00894 176 212 3.4E-16 T 28-03-2018 IPR008613 Excalibur calcium-binding domain RK98_RS13340 437c347547df1a16bbd309fc94bae77b 242 SUPERFAMILY SSF51366 3 237 7.16E-72 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RK98_RS13340 437c347547df1a16bbd309fc94bae77b 242 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 30 43 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RK98_RS13340 437c347547df1a16bbd309fc94bae77b 242 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 1 239 26.879 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RK98_RS13340 437c347547df1a16bbd309fc94bae77b 242 Pfam PF00290 Tryptophan synthase alpha chain 3 229 4.2E-74 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RK98_RS13340 437c347547df1a16bbd309fc94bae77b 242 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 16 240 1.0E-62 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RK98_RS13340 437c347547df1a16bbd309fc94bae77b 242 Gene3D G3DSA:3.20.20.70 1 241 1.2E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 88 403 3.2E-103 T 28-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 Gene3D G3DSA:2.30.42.10 136 215 3.3E-22 T 28-03-2018 RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 SUPERFAMILY SSF50156 107 222 3.33E-22 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 SMART SM00228 136 207 5.3E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 Gene3D G3DSA:3.90.226.10 216 403 5.5E-57 T 28-03-2018 RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 Pfam PF03572 Peptidase family S41 231 394 8.2E-49 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 SMART SM00245 207 396 1.6E-59 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 SUPERFAMILY SSF52096 74 154 1.49E-69 T 28-03-2018 IPR029045 ClpP/crotonase-like domain RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 SUPERFAMILY SSF52096 225 400 1.49E-69 T 28-03-2018 IPR029045 ClpP/crotonase-like domain RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 Pfam PF13180 PDZ domain 137 215 9.9E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 SUPERFAMILY SSF47090 405 475 5.63E-13 T 28-03-2018 IPR002477 Peptidoglycan binding-like RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 Pfam PF01471 Putative peptidoglycan binding domain 419 469 8.0E-12 T 28-03-2018 IPR002477 Peptidoglycan binding-like RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 Gene3D G3DSA:3.30.750.44 45 135 4.3E-18 T 28-03-2018 RK98_RS13595 b59a4ea04d50fbfe9a404f04111c5f5d 496 Gene3D G3DSA:1.10.101.10 404 483 6.1E-14 T 28-03-2018 IPR002477 Peptidoglycan binding-like RK98_RS03255 a70df5e5e57f9095682d0e8bc22e86e3 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 192 4.4E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RK98_RS03255 a70df5e5e57f9095682d0e8bc22e86e3 227 Gene3D G3DSA:3.40.50.1000 1 226 1.1E-29 T 28-03-2018 IPR023214 HAD-like domain RK98_RS03255 a70df5e5e57f9095682d0e8bc22e86e3 227 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 95 192 1.0E-12 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 RK98_RS03255 a70df5e5e57f9095682d0e8bc22e86e3 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 194 4.9E-28 T 28-03-2018 IPR023214 HAD-like domain RK98_RS03255 a70df5e5e57f9095682d0e8bc22e86e3 227 SUPERFAMILY SSF56784 1 226 7.6E-41 T 28-03-2018 IPR023214 HAD-like domain RK98_RS07215 74757600c5416d807484d0f280163852 75 SUPERFAMILY SSF50037 8 74 7.33E-12 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal RK98_RS07215 74757600c5416d807484d0f280163852 75 SMART SM00899 2 75 2.6E-9 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RK98_RS07215 74757600c5416d807484d0f280163852 75 Pfam PF04023 FeoA domain 11 72 1.2E-10 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 RK98_RS07215 74757600c5416d807484d0f280163852 75 Gene3D G3DSA:2.30.30.90 6 75 1.9E-11 T 28-03-2018 RK98_RS14290 d65df7b108e5172852c7cbdd3dab4582 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 3.1E-21 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14290 d65df7b108e5172852c7cbdd3dab4582 49 SUPERFAMILY SSF57829 1 49 6.1E-19 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 RK98_RS14290 d65df7b108e5172852c7cbdd3dab4582 49 Pfam PF00471 Ribosomal protein L33 3 49 2.1E-22 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14290 d65df7b108e5172852c7cbdd3dab4582 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.198 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14290 d65df7b108e5172852c7cbdd3dab4582 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 28-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS14245 598a04e6466e8dff9ed06e07804c904f 103 PRINTS PR00813 Bacterial general secretion pathway protein G signature 46 64 9.1E-8 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RK98_RS14245 598a04e6466e8dff9ed06e07804c904f 103 PRINTS PR00813 Bacterial general secretion pathway protein G signature 10 35 9.1E-8 T 28-03-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 RK98_RS14245 598a04e6466e8dff9ed06e07804c904f 103 SUPERFAMILY SSF54523 11 74 5.76E-14 T 28-03-2018 RK98_RS14245 598a04e6466e8dff9ed06e07804c904f 103 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 1.4E-4 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site RK98_RS14245 598a04e6466e8dff9ed06e07804c904f 103 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 3.0E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site RK98_RS14245 598a04e6466e8dff9ed06e07804c904f 103 PIRSF PIRSF029928 1 103 8.0E-37 T 28-03-2018 IPR016940 ComG operon protein C GO:0030420 RK98_RS14245 598a04e6466e8dff9ed06e07804c904f 103 Gene3D G3DSA:3.30.700.10 11 103 4.5E-10 T 28-03-2018 RK98_RS04075 f3b66afed81b078c7d7aea659c80451b 281 SUPERFAMILY SSF51735 3 250 6.61E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS04075 f3b66afed81b078c7d7aea659c80451b 281 Pfam PF13460 NAD(P)H-binding 7 188 1.9E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS04075 f3b66afed81b078c7d7aea659c80451b 281 Gene3D G3DSA:3.40.50.720 1 274 1.1E-21 T 28-03-2018 RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 PRINTS PR00173 Glutamate-aspartate symporter signature 154 176 1.1E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 PRINTS PR00173 Glutamate-aspartate symporter signature 336 355 1.1E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 PRINTS PR00173 Glutamate-aspartate symporter signature 201 220 1.1E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 1.1E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.1E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 PRINTS PR00173 Glutamate-aspartate symporter signature 363 383 1.1E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 PRINTS PR00173 Glutamate-aspartate symporter signature 301 327 1.1E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 304 327 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 Pfam PF00375 Sodium:dicarboxylate symporter family 11 409 1.1E-122 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 SUPERFAMILY SSF118215 10 410 3.14E-121 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 40 55 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site RK98_RS08180 e414ba4cbac786bbc747d1d674d0bb6d 425 Gene3D G3DSA:1.10.3860.10 1 416 3.2E-128 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS12750 dabe16c645be77d45a3ea598a683b2d0 94 SUPERFAMILY SSF64376 4 91 3.53E-26 T 28-03-2018 IPR007393 Domain of unknown function DUF448 RK98_RS12750 dabe16c645be77d45a3ea598a683b2d0 94 Gene3D G3DSA:3.30.1230.10 1 92 9.9E-27 T 28-03-2018 IPR007393 Domain of unknown function DUF448 RK98_RS12750 dabe16c645be77d45a3ea598a683b2d0 94 Pfam PF04296 Protein of unknown function (DUF448) 9 83 3.9E-24 T 28-03-2018 IPR007393 Domain of unknown function DUF448 RK98_RS09895 800cf68d08f80bb30ac664626ef3a415 119 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 117 1.1E-33 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RK98_RS09895 800cf68d08f80bb30ac664626ef3a415 119 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 23.526 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RK98_RS09895 800cf68d08f80bb30ac664626ef3a415 119 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 102 1.2E-18 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RK98_RS09895 800cf68d08f80bb30ac664626ef3a415 119 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 116 4.4E-27 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RK98_RS09895 800cf68d08f80bb30ac664626ef3a415 119 SUPERFAMILY SSF56214 1 115 1.83E-30 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RK98_RS09895 800cf68d08f80bb30ac664626ef3a415 119 Gene3D G3DSA:3.90.470.20 1 119 8.9E-32 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RK98_RS09895 800cf68d08f80bb30ac664626ef3a415 119 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 115 8.0E-59 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 RK98_RS13615 a2bb6a3cd5b68b44ce138c3fa8bd0435 177 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 155 2.8E-59 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS13615 a2bb6a3cd5b68b44ce138c3fa8bd0435 177 SUPERFAMILY SSF55068 4 167 1.57E-69 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS13615 a2bb6a3cd5b68b44ce138c3fa8bd0435 177 Pfam PF01625 Peptide methionine sulfoxide reductase 6 156 1.2E-58 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS13615 a2bb6a3cd5b68b44ce138c3fa8bd0435 177 Gene3D G3DSA:3.30.1060.10 1 172 4.7E-64 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS13615 a2bb6a3cd5b68b44ce138c3fa8bd0435 177 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 36.832 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS04570 a991f5c6cea359b220693adb0d6c67c2 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 411 6.0E-58 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RK98_RS04570 a991f5c6cea359b220693adb0d6c67c2 451 Pfam PF01554 MatE 246 396 8.6E-15 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RK98_RS04570 a991f5c6cea359b220693adb0d6c67c2 451 Pfam PF01554 MatE 24 185 4.3E-24 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RK98_RS04570 a991f5c6cea359b220693adb0d6c67c2 451 PIRSF PIRSF006603 1 445 2.0E-77 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 161 168 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 7.6E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 7.6E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 PRINTS PR01703 Manganese superoxide dismutase signature 159 171 7.6E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 7.6E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 7.6E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 SUPERFAMILY SSF46609 1 90 1.7E-38 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 193 2.0E-42 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 1.4E-34 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 SUPERFAMILY SSF54719 91 197 3.54E-45 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 PIRSF PIRSF000349 1 199 1.5E-80 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 RK98_RS14300 71ef222343318a115c6ac41e5490b280 199 Gene3D G3DSA:1.10.287.990 20 89 3.6E-31 T 28-03-2018 RK98_RS05870 96d08ae20b0c79cf9946ae351e1a37a9 33 SUPERFAMILY SSF52402 2 33 5.94E-5 T 28-03-2018 RK98_RS10430 6e278b4cd6882107cfe4dd2f9f61e7f1 128 Gene3D G3DSA:3.40.1360.20 1 117 2.1E-13 T 28-03-2018 RK98_RS10430 6e278b4cd6882107cfe4dd2f9f61e7f1 128 SMART SM00493 5 79 3.1E-8 T 28-03-2018 IPR006171 TOPRIM domain RK98_RS10430 6e278b4cd6882107cfe4dd2f9f61e7f1 128 SUPERFAMILY SSF110455 1 112 9.16E-34 T 28-03-2018 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 Hamap MF_00600 60 kDa chaperonin [groL]. 1 537 40.696 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 PRINTS PR00298 60kDa chaperonin signature 82 109 2.5E-73 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 PRINTS PR00298 60kDa chaperonin signature 396 417 2.5E-73 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 PRINTS PR00298 60kDa chaperonin signature 266 289 2.5E-73 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 PRINTS PR00298 60kDa chaperonin signature 348 373 2.5E-73 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 PRINTS PR00298 60kDa chaperonin signature 26 52 2.5E-73 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 Gene3D G3DSA:1.10.560.10 2 186 1.9E-42 T 28-03-2018 IPR027413 GroEL-like equatorial domain RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 SUPERFAMILY SSF52029 182 374 9.87E-82 T 28-03-2018 IPR027409 GroEL-like apical domain RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 Gene3D G3DSA:3.50.7.10 187 370 7.4E-94 T 28-03-2018 IPR027409 GroEL-like apical domain RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 SUPERFAMILY SSF54849 137 202 6.64E-27 T 28-03-2018 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 520 1.3E-99 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 SUPERFAMILY SSF48592 6 133 2.75E-77 T 28-03-2018 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 SUPERFAMILY SSF48592 404 518 2.75E-77 T 28-03-2018 RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 Gene3D G3DSA:1.10.560.10 371 513 3.4E-27 T 28-03-2018 IPR027413 GroEL-like equatorial domain RK98_RS10155 6a0297b52c658e50817d3258eea761e2 538 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 524 5.6E-249 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 RK98_RS04835 fe82eab9806c93505f47a35d32e80c40 93 SUPERFAMILY SSF54236 23 92 6.51E-7 T 28-03-2018 IPR029071 Ubiquitin-related domain RK98_RS04835 fe82eab9806c93505f47a35d32e80c40 93 Gene3D G3DSA:3.10.20.90 5 93 1.5E-4 T 28-03-2018 RK98_RS04835 fe82eab9806c93505f47a35d32e80c40 93 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 17 92 4.9E-11 T 28-03-2018 IPR024962 YukD-like RK98_RS04835 fe82eab9806c93505f47a35d32e80c40 93 PIRSF PIRSF037793 14 93 2.9E-32 T 28-03-2018 IPR014921 EsaB RK98_RS08750 09442f3fdda73303d4c72b0625a2f02c 223 SUPERFAMILY SSF161098 5 214 3.27E-47 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS08750 09442f3fdda73303d4c72b0625a2f02c 223 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 8 216 2.1E-78 T 28-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 RK98_RS08750 09442f3fdda73303d4c72b0625a2f02c 223 Gene3D G3DSA:1.10.3720.10 4 220 1.5E-36 T 28-03-2018 RK98_RS08750 09442f3fdda73303d4c72b0625a2f02c 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 23 210 6.1E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS13380 b7ed6f72a4358c94d4747db0f6de252c 276 SUPERFAMILY SSF161098 64 251 2.49E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS13380 b7ed6f72a4358c94d4747db0f6de252c 276 Gene3D G3DSA:1.10.3720.10 7 258 2.3E-37 T 28-03-2018 RK98_RS13380 b7ed6f72a4358c94d4747db0f6de252c 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 265 5.8E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS07680 eff03e5bcf16000f6bbf602514f1d285 433 Pfam PF10100 Staphylopine dehydrogenase 3 424 1.4E-179 T 28-03-2018 IPR016935 Staphylopine dehydrogenase RK98_RS07680 eff03e5bcf16000f6bbf602514f1d285 433 Gene3D G3DSA:1.10.1040.10 210 409 7.4E-4 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RK98_RS07680 eff03e5bcf16000f6bbf602514f1d285 433 PIRSF PIRSF029692 1 430 5.9E-215 T 28-03-2018 IPR016935 Staphylopine dehydrogenase RK98_RS14240 bc7722d00161277e6a9581001070789d 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 5.2E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site RK98_RS14240 bc7722d00161277e6a9581001070789d 148 PIRSF PIRSF021292 7 148 1.8E-45 T 28-03-2018 IPR016785 ComG operon protein 4 GO:0030420 RK98_RS14240 bc7722d00161277e6a9581001070789d 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 31 2.3E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site RK98_RS09920 c9782cdf9467f0b44219935da299309e 333 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 1 87 9.0E-44 T 28-03-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 RK98_RS09920 c9782cdf9467f0b44219935da299309e 333 SUPERFAMILY SSF101215 2 81 6.54E-26 T 28-03-2018 IPR017944 KaiA/RbsU helical domain GO:0006468 RK98_RS09920 c9782cdf9467f0b44219935da299309e 333 Gene3D G3DSA:1.10.1240.30 2 80 4.4E-14 T 28-03-2018 IPR017944 KaiA/RbsU helical domain GO:0006468 RK98_RS09920 c9782cdf9467f0b44219935da299309e 333 SUPERFAMILY SSF81606 129 330 3.4E-13 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RK98_RS09920 c9782cdf9467f0b44219935da299309e 333 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 7 79 5.3E-14 T 28-03-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 RK98_RS09920 c9782cdf9467f0b44219935da299309e 333 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 142 331 4.0E-48 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RK98_RS09920 c9782cdf9467f0b44219935da299309e 333 SMART SM00332 91 329 4.0E-13 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RK98_RS09920 c9782cdf9467f0b44219935da299309e 333 Gene3D G3DSA:3.60.40.10 82 332 4.6E-32 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RK98_RS09920 c9782cdf9467f0b44219935da299309e 333 SMART SM00331 116 331 1.6E-77 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 Pfam PF00633 Helix-hairpin-helix motif 99 128 2.2E-6 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 151 5.6E-15 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 Gene3D G3DSA:1.10.340.30 21 117 2.1E-29 T 28-03-2018 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 SUPERFAMILY SSF48150 7 221 8.32E-68 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 Gene3D G3DSA:1.10.1670.10 118 224 9.3E-30 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 Pfam PF14815 NUDIX domain 234 340 6.8E-22 T 28-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 Gene3D G3DSA:3.90.79.10 228 344 5.5E-13 T 28-03-2018 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 SMART SM00478 39 189 1.0E-34 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 7 274 2.3E-98 T 28-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 191 207 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 RK98_RS01125 0ffbd10693f099265e56a3f1444967a4 345 SUPERFAMILY SSF55811 219 343 2.58E-22 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 RK98_RS07970 779adfa44fb24cf09ed969683553f9df 309 Pfam PF07968 Leukocidin/Hemolysin toxin family 58 298 2.7E-85 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS07970 779adfa44fb24cf09ed969683553f9df 309 TIGRFAM TIGR01002 hlyII: beta-channel forming cytolysin 6 303 2.6E-87 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07970 779adfa44fb24cf09ed969683553f9df 309 PRINTS PR01468 Staphylococcal bi-component toxin signature 123 144 2.1E-30 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07970 779adfa44fb24cf09ed969683553f9df 309 PRINTS PR01468 Staphylococcal bi-component toxin signature 62 81 2.1E-30 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07970 779adfa44fb24cf09ed969683553f9df 309 PRINTS PR01468 Staphylococcal bi-component toxin signature 232 249 2.1E-30 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07970 779adfa44fb24cf09ed969683553f9df 309 SUPERFAMILY SSF56959 33 304 4.09E-109 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS07970 779adfa44fb24cf09ed969683553f9df 309 Gene3D G3DSA:2.70.240.10 29 302 2.5E-100 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 Gene3D G3DSA:1.10.8.10 1 56 4.9E-26 T 28-03-2018 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 SUPERFAMILY SSF46934 4 55 8.62E-21 T 28-03-2018 IPR009060 UBA-like GO:0005515 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 SUPERFAMILY SSF54713 56 144 1.64E-22 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 293 3.9E-117 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 292 81.715 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 Gene3D G3DSA:3.30.479.20 58 158 4.3E-23 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 Pfam PF00889 Elongation factor TS 71 275 2.6E-75 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 Gene3D G3DSA:3.30.479.20 159 291 1.7E-50 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS12695 a6bc6117302197a30ff1a4feeac41eb5 293 SUPERFAMILY SSF54713 152 293 8.24E-51 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS08885 a70d047422876c35506c546139eba426 295 Pfam PF00583 Acetyltransferase (GNAT) family 178 272 5.2E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS08885 a70d047422876c35506c546139eba426 295 Gene3D G3DSA:3.40.630.30 95 292 1.4E-12 T 28-03-2018 RK98_RS08885 a70d047422876c35506c546139eba426 295 SUPERFAMILY SSF55729 6 278 1.57E-14 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS13235 48f0902927ae2857b0e9bd806e1da6f6 202 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 201 1.1E-59 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RK98_RS13235 48f0902927ae2857b0e9bd806e1da6f6 202 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 200 20.771 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RK98_RS13235 48f0902927ae2857b0e9bd806e1da6f6 202 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 191 8.6E-53 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RK98_RS13235 48f0902927ae2857b0e9bd806e1da6f6 202 SMART SM01207 8 192 9.4E-79 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 RK98_RS12940 d7d03a622e59690d6da3444b38277aa3 158 PIRSF PIRSF000303 1 158 7.6E-65 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RK98_RS12940 d7d03a622e59690d6da3444b38277aa3 158 PRINTS PR01011 Glutathione peroxidase family signature 57 73 2.4E-20 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RK98_RS12940 d7d03a622e59690d6da3444b38277aa3 158 PRINTS PR01011 Glutathione peroxidase family signature 22 39 2.4E-20 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RK98_RS12940 d7d03a622e59690d6da3444b38277aa3 158 PRINTS PR01011 Glutathione peroxidase family signature 122 131 2.4E-20 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RK98_RS12940 d7d03a622e59690d6da3444b38277aa3 158 SUPERFAMILY SSF52833 3 158 5.53E-58 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS12940 d7d03a622e59690d6da3444b38277aa3 158 Gene3D G3DSA:3.40.30.10 2 158 4.0E-45 T 28-03-2018 RK98_RS12940 d7d03a622e59690d6da3444b38277aa3 158 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 60 67 - T 28-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 RK98_RS12940 d7d03a622e59690d6da3444b38277aa3 158 Pfam PF00255 Glutathione peroxidase 4 110 1.0E-38 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RK98_RS07240 c060eb257e449990a8c3016754e9f173 388 TIGRFAM TIGR01835 HMG-CoA-S_prok: hydroxymethylglutaryl-CoA synthase 3 384 2.8E-160 T 28-03-2018 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922 RK98_RS07240 c060eb257e449990a8c3016754e9f173 388 Gene3D G3DSA:3.40.47.10 6 172 2.2E-13 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS07240 c060eb257e449990a8c3016754e9f173 388 SUPERFAMILY SSF53901 3 166 1.73E-44 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS07240 c060eb257e449990a8c3016754e9f173 388 Gene3D G3DSA:3.40.47.10 175 319 3.3E-46 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS07240 c060eb257e449990a8c3016754e9f173 388 SUPERFAMILY SSF53901 168 385 1.42E-71 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS07240 c060eb257e449990a8c3016754e9f173 388 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 177 251 1.2E-11 T 28-03-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 RK98_RS07240 c060eb257e449990a8c3016754e9f173 388 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 263 382 1.0E-13 T 28-03-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 RK98_RS07240 c060eb257e449990a8c3016754e9f173 388 Pfam PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal 3 164 6.2E-19 T 28-03-2018 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal GO:0004421|GO:0008299 Reactome: R-HSA-1989781 RK98_RS00220 1530b5a589e59bd166c35668a2c6b88d 555 Pfam PF01268 Formate--tetrahydrofolate ligase 5 555 1.7E-264 T 28-03-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RK98_RS00220 1530b5a589e59bd166c35668a2c6b88d 555 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 3 555 48.702 T 28-03-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RK98_RS00220 1530b5a589e59bd166c35668a2c6b88d 555 SUPERFAMILY SSF52540 6 553 2.88E-239 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS00220 1530b5a589e59bd166c35668a2c6b88d 555 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 28-03-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RK98_RS00220 1530b5a589e59bd166c35668a2c6b88d 555 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 28-03-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 RK98_RS00220 1530b5a589e59bd166c35668a2c6b88d 555 Gene3D G3DSA:3.10.410.10 443 531 9.7E-40 T 28-03-2018 RK98_RS00220 1530b5a589e59bd166c35668a2c6b88d 555 Gene3D G3DSA:3.40.50.300 232 441 5.6E-75 T 28-03-2018 RK98_RS00220 1530b5a589e59bd166c35668a2c6b88d 555 Gene3D G3DSA:3.40.50.300 14 231 4.6E-89 T 28-03-2018 RK98_RS07190 bec654d7de77da271d01d3d7405c4f55 199 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 95 108 6.2E-4 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS07190 bec654d7de77da271d01d3d7405c4f55 199 SMART SM01266 4 59 3.4E-18 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RK98_RS07190 bec654d7de77da271d01d3d7405c4f55 199 Pfam PF12464 Maltose acetyltransferase 6 57 1.8E-16 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 RK98_RS07190 bec654d7de77da271d01d3d7405c4f55 199 SUPERFAMILY SSF51161 19 187 1.94E-50 T 28-03-2018 IPR011004 Trimeric LpxA-like RK98_RS07190 bec654d7de77da271d01d3d7405c4f55 199 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 5.7E-9 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS07190 bec654d7de77da271d01d3d7405c4f55 199 Gene3D G3DSA:2.160.10.10 1 199 1.0E-57 T 28-03-2018 RK98_RS08745 64f06a8af167f660264946581d5f5394 260 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 47 256 7.6E-55 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 RK98_RS08745 64f06a8af167f660264946581d5f5394 260 Gene3D G3DSA:3.40.190.10 38 130 1.6E-21 T 28-03-2018 RK98_RS08745 64f06a8af167f660264946581d5f5394 260 SUPERFAMILY SSF53850 40 258 3.73E-56 T 28-03-2018 RK98_RS08745 64f06a8af167f660264946581d5f5394 260 Gene3D G3DSA:3.40.190.10 131 224 2.1E-28 T 28-03-2018 RK98_RS08745 64f06a8af167f660264946581d5f5394 260 Pfam PF13531 Bacterial extracellular solute-binding protein 42 258 4.4E-41 T 28-03-2018 RK98_RS08745 64f06a8af167f660264946581d5f5394 260 PIRSF PIRSF004846 1 260 6.3E-81 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 RK98_RS01345 c2c13fd4fd39d95553c3b45f97ceff49 230 Gene3D G3DSA:3.20.20.390 1 224 3.9E-26 T 28-03-2018 RK98_RS01345 c2c13fd4fd39d95553c3b45f97ceff49 230 Pfam PF01884 PcrB family 2 224 9.1E-70 T 28-03-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 RK98_RS01345 c2c13fd4fd39d95553c3b45f97ceff49 230 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 3 226 26.101 T 28-03-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 RK98_RS01345 c2c13fd4fd39d95553c3b45f97ceff49 230 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 8 223 2.6E-61 T 28-03-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 RK98_RS01345 c2c13fd4fd39d95553c3b45f97ceff49 230 SUPERFAMILY SSF51395 4 224 3.11E-46 T 28-03-2018 RK98_RS04830 db63ebe91451416a9b32088b1f8f8fce 444 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 11 393 2.8E-136 T 28-03-2018 IPR018778 Type VII secretion system EssB RK98_RS04830 db63ebe91451416a9b32088b1f8f8fce 444 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 36 392 2.8E-120 T 28-03-2018 IPR018778 Type VII secretion system EssB RK98_RS04830 db63ebe91451416a9b32088b1f8f8fce 444 Gene3D G3DSA:3.80.10.10 62 444 1.3E-5 T 28-03-2018 IPR032675 Leucine-rich repeat domain, L domain-like RK98_RS10530 edb6840cea7ca7963f637b6a02f87e1a 259 Pfam PF03374 Phage antirepressor protein KilAC domain 145 248 3.2E-29 T 28-03-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 RK98_RS10530 edb6840cea7ca7963f637b6a02f87e1a 259 Pfam PF02498 BRO family, N-terminal domain 14 103 1.8E-27 T 28-03-2018 IPR003497 BRO N-terminal domain RK98_RS10530 edb6840cea7ca7963f637b6a02f87e1a 259 SMART SM01040 13 103 9.8E-40 T 28-03-2018 IPR003497 BRO N-terminal domain RK98_RS07960 0efa7ab9e22dbb0f4ca3f8dc99d243f2 325 TIGRFAM TIGR01002 hlyII: beta-channel forming cytolysin 5 315 2.4E-124 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07960 0efa7ab9e22dbb0f4ca3f8dc99d243f2 325 PRINTS PR01468 Staphylococcal bi-component toxin signature 64 83 2.8E-27 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07960 0efa7ab9e22dbb0f4ca3f8dc99d243f2 325 PRINTS PR01468 Staphylococcal bi-component toxin signature 125 146 2.8E-27 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07960 0efa7ab9e22dbb0f4ca3f8dc99d243f2 325 PRINTS PR01468 Staphylococcal bi-component toxin signature 245 262 2.8E-27 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07960 0efa7ab9e22dbb0f4ca3f8dc99d243f2 325 SUPERFAMILY SSF56959 28 324 1.24E-122 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS07960 0efa7ab9e22dbb0f4ca3f8dc99d243f2 325 Gene3D G3DSA:2.70.240.10 33 315 6.0E-104 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS07960 0efa7ab9e22dbb0f4ca3f8dc99d243f2 325 Pfam PF07968 Leukocidin/Hemolysin toxin family 60 310 5.1E-88 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS11490 741f35b125b5067a6ca24de85227c175 319 Gene3D G3DSA:3.40.50.1980 23 150 2.0E-26 T 28-03-2018 RK98_RS11490 741f35b125b5067a6ca24de85227c175 319 Gene3D G3DSA:3.40.50.1980 151 319 9.9E-29 T 28-03-2018 RK98_RS11490 741f35b125b5067a6ca24de85227c175 319 Pfam PF01497 Periplasmic binding protein 52 291 2.5E-33 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RK98_RS11490 741f35b125b5067a6ca24de85227c175 319 SUPERFAMILY SSF53807 31 301 7.01E-56 T 28-03-2018 RK98_RS07385 613b6740cfc5746164b9c619d99b2db9 319 Gene3D G3DSA:3.10.180.10 2 146 1.1E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS07385 613b6740cfc5746164b9c619d99b2db9 319 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 267 2.5E-23 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK98_RS07385 613b6740cfc5746164b9c619d99b2db9 319 Gene3D G3DSA:3.10.180.10 153 319 9.3E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS07385 613b6740cfc5746164b9c619d99b2db9 319 SUPERFAMILY SSF54593 4 304 2.37E-47 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS03685 cde7028bb6d91bbcfdae110edaa98ec3 82 Gene3D G3DSA:3.40.1440.10 1 82 2.4E-10 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily RK98_RS03685 cde7028bb6d91bbcfdae110edaa98ec3 82 SMART SM00465 3 80 0.0019 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily RK98_RS03685 cde7028bb6d91bbcfdae110edaa98ec3 82 Pfam PF01541 GIY-YIG catalytic domain 4 74 7.7E-16 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily RK98_RS03685 cde7028bb6d91bbcfdae110edaa98ec3 82 SUPERFAMILY SSF82771 3 74 3.01E-16 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily RK98_RS05345 1e6fc7c9a3438656f3c92fd281366e0a 346 Pfam PF05913 Bacterial protein of unknown function (DUF871) 7 338 9.0E-86 T 28-03-2018 IPR008589 Protein of unknown function DUF871, prokaryotic RK98_RS05345 1e6fc7c9a3438656f3c92fd281366e0a 346 SUPERFAMILY SSF50891 231 339 1.52E-32 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS05345 1e6fc7c9a3438656f3c92fd281366e0a 346 Gene3D G3DSA:2.40.100.10 229 339 7.5E-31 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS05345 1e6fc7c9a3438656f3c92fd281366e0a 346 SUPERFAMILY SSF51445 1 225 9.05E-52 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily RK98_RS05345 1e6fc7c9a3438656f3c92fd281366e0a 346 Gene3D G3DSA:3.20.20.70 1 223 1.3E-51 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS07210 abe8598425c9156fdc19fc7eae8097ce 822 SUPERFAMILY SSF82866 139 327 1.57E-28 T 28-03-2018 RK98_RS07210 abe8598425c9156fdc19fc7eae8097ce 822 Pfam PF03176 MMPL family 40 326 4.7E-63 T 28-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 RK98_RS07210 abe8598425c9156fdc19fc7eae8097ce 822 Pfam PF03176 MMPL family 383 687 9.2E-43 T 28-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 RK98_RS07210 abe8598425c9156fdc19fc7eae8097ce 822 Gene3D G3DSA:1.20.1640.10 78 337 6.6E-35 T 28-03-2018 RK98_RS07210 abe8598425c9156fdc19fc7eae8097ce 822 Gene3D G3DSA:1.20.1640.10 459 686 6.4E-31 T 28-03-2018 RK98_RS07210 abe8598425c9156fdc19fc7eae8097ce 822 SUPERFAMILY SSF82866 450 685 8.37E-30 T 28-03-2018 RK98_RS12290 338e5f57902f3376af9bfe88a680dfee 133 Pfam PF04977 Septum formation initiator 51 125 1.9E-13 T 28-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 RK98_RS12290 338e5f57902f3376af9bfe88a680dfee 133 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 44 126 2.4E-24 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RK98_RS12290 338e5f57902f3376af9bfe88a680dfee 133 Hamap MF_00910 Cell division protein FtsL [ftsL]. 44 126 13.724 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 RK98_RS14195 929be41518fb878765db168dccbc2af7 276 Gene3D G3DSA:3.30.930.10 2 276 5.4E-58 T 28-03-2018 RK98_RS14195 929be41518fb878765db168dccbc2af7 276 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 2 276 68.48 T 28-03-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 RK98_RS14195 929be41518fb878765db168dccbc2af7 276 Pfam PF03099 Biotin/lipoate A/B protein ligase family 51 188 3.3E-27 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 RK98_RS14195 929be41518fb878765db168dccbc2af7 276 SUPERFAMILY SSF55681 4 276 1.49E-65 T 28-03-2018 RK98_RS06100 bb2c164581122e950c14268caa61225e 369 Gene3D G3DSA:1.10.10.10 1 60 2.4E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06100 bb2c164581122e950c14268caa61225e 369 Pfam PF00480 ROK family 86 337 1.3E-33 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 RK98_RS06100 bb2c164581122e950c14268caa61225e 369 SUPERFAMILY SSF53067 66 355 8.84E-37 T 28-03-2018 RK98_RS06100 bb2c164581122e950c14268caa61225e 369 Gene3D G3DSA:3.30.420.40 65 202 1.0E-17 T 28-03-2018 RK98_RS06100 bb2c164581122e950c14268caa61225e 369 SUPERFAMILY SSF46785 1 59 7.05E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06100 bb2c164581122e950c14268caa61225e 369 ProSitePatterns PS01125 ROK family signature. 197 224 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 RK98_RS06100 bb2c164581122e950c14268caa61225e 369 Gene3D G3DSA:3.30.420.40 203 337 2.5E-18 T 28-03-2018 RK98_RS10390 dfa9e300f2752fcca974608f6bc2dab2 238 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 24 233 1.3E-50 T 28-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RK98_RS10390 dfa9e300f2752fcca974608f6bc2dab2 238 Pfam PF01487 Type I 3-dehydroquinase 20 233 1.4E-47 T 28-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RK98_RS10390 dfa9e300f2752fcca974608f6bc2dab2 238 Gene3D G3DSA:3.20.20.70 1 238 1.7E-56 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS10390 dfa9e300f2752fcca974608f6bc2dab2 238 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 5 238 37.269 T 28-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 RK98_RS10390 dfa9e300f2752fcca974608f6bc2dab2 238 SUPERFAMILY SSF51569 12 235 2.71E-61 T 28-03-2018 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 287 1.9E-97 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 Gene3D G3DSA:1.10.287.80 240 282 3.0E-14 T 28-03-2018 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 Gene3D G3DSA:1.10.287.80 2 41 8.6E-17 T 28-03-2018 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 Gene3D G3DSA:3.40.1380.10 42 239 2.1E-66 T 28-03-2018 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 SUPERFAMILY SSF52943 2 287 3.92E-83 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 Pfam PF00231 ATP synthase 3 287 2.5E-91 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.6E-33 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 2.6E-33 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.6E-33 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 2.6E-33 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09705 f914031da5a8d38bc7ec7b52e7e34ec3 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 34.394 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS10475 31ab5cab2942a7c6e6697d937c0170f7 413 Gene3D G3DSA:3.90.1150.10 286 405 4.0E-44 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS10475 31ab5cab2942a7c6e6697d937c0170f7 413 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 10 410 8.6E-186 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RK98_RS10475 31ab5cab2942a7c6e6697d937c0170f7 413 Pfam PF00266 Aminotransferase class-V 29 398 2.2E-161 T 28-03-2018 IPR000192 Aminotransferase class V domain RK98_RS10475 31ab5cab2942a7c6e6697d937c0170f7 413 SUPERFAMILY SSF53383 7 405 3.23E-129 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS10475 31ab5cab2942a7c6e6697d937c0170f7 413 PIRSF PIRSF005572 25 411 2.6E-49 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RK98_RS10475 31ab5cab2942a7c6e6697d937c0170f7 413 Gene3D G3DSA:3.40.640.10 36 285 1.1E-61 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS09735 2b3b2e3d3e9721a2f4a430ff55b65aed 146 Pfam PF07977 FabA-like domain 14 135 1.6E-33 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 RK98_RS09735 2b3b2e3d3e9721a2f4a430ff55b65aed 146 Gene3D G3DSA:3.10.129.10 1 146 1.8E-54 T 28-03-2018 RK98_RS09735 2b3b2e3d3e9721a2f4a430ff55b65aed 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 6 142 5.1E-53 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 RK98_RS09735 2b3b2e3d3e9721a2f4a430ff55b65aed 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 5 144 31.934 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 RK98_RS09735 2b3b2e3d3e9721a2f4a430ff55b65aed 146 SUPERFAMILY SSF54637 3 142 1.22E-46 T 28-03-2018 IPR029069 HotDog domain RK98_RS14610 bae3b86b73751d170d76ef59ccd95c80 142 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 139 2.6E-40 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RK98_RS14610 bae3b86b73751d170d76ef59ccd95c80 142 Gene3D G3DSA:3.30.420.140 2 142 2.6E-40 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 RK98_RS14610 bae3b86b73751d170d76ef59ccd95c80 142 SUPERFAMILY SSF53098 5 141 2.58E-41 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS14610 bae3b86b73751d170d76ef59ccd95c80 142 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 142 25.173 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RK98_RS14610 bae3b86b73751d170d76ef59ccd95c80 142 Pfam PF03652 Holliday junction resolvase 5 140 6.8E-41 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 RK98_RS14610 bae3b86b73751d170d76ef59ccd95c80 142 SMART SM00732 4 107 1.5E-29 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 RK98_RS01165 a1970078fdd96d3aed7d55d6835d8235 171 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 9.1E-47 T 28-03-2018 IPR006286 Peptidase C56, PfpI RK98_RS01165 a1970078fdd96d3aed7d55d6835d8235 171 SUPERFAMILY SSF52317 1 170 1.07E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS01165 a1970078fdd96d3aed7d55d6835d8235 171 Gene3D G3DSA:3.40.50.880 1 171 1.3E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS01165 a1970078fdd96d3aed7d55d6835d8235 171 Pfam PF01965 DJ-1/PfpI family 3 169 9.5E-53 T 28-03-2018 IPR002818 DJ-1/PfpI RK98_RS06850 d4b850eb45afc9899e5099b94a539000 616 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 21 610 8.7E-177 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 RK98_RS06850 d4b850eb45afc9899e5099b94a539000 616 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 20 610 3.2E-173 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 RK98_RS06850 d4b850eb45afc9899e5099b94a539000 616 SUPERFAMILY SSF51998 26 590 3.36E-183 T 28-03-2018 RK98_RS06850 d4b850eb45afc9899e5099b94a539000 616 Gene3D G3DSA:3.20.70.20 26 592 5.9E-193 T 28-03-2018 RK98_RS06850 d4b850eb45afc9899e5099b94a539000 616 ProSitePatterns PS00850 Glycine radical domain signature. 581 589 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site RK98_RS04970 679a9cdba9684cd4b2fe4669aaeb7d70 246 Gene3D G3DSA:3.40.50.2300 1 133 2.6E-27 T 28-03-2018 RK98_RS04970 679a9cdba9684cd4b2fe4669aaeb7d70 246 SMART SM00448 1 112 4.6E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS04970 679a9cdba9684cd4b2fe4669aaeb7d70 246 Gene3D G3DSA:2.20.25.10 208 244 1.3E-10 T 28-03-2018 RK98_RS04970 679a9cdba9684cd4b2fe4669aaeb7d70 246 SUPERFAMILY SSF52172 1 127 2.85E-27 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS04970 679a9cdba9684cd4b2fe4669aaeb7d70 246 Pfam PF04397 LytTr DNA-binding domain 147 242 1.3E-28 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 RK98_RS04970 679a9cdba9684cd4b2fe4669aaeb7d70 246 Pfam PF00072 Response regulator receiver domain 4 113 3.7E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS04970 679a9cdba9684cd4b2fe4669aaeb7d70 246 Gene3D G3DSA:2.40.50.40 137 207 1.4E-16 T 28-03-2018 RK98_RS04970 679a9cdba9684cd4b2fe4669aaeb7d70 246 SMART SM00850 147 244 6.5E-33 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 RK98_RS06980 581e7f526b3a2d6c7575528911afc155 211 Pfam PF00746 LPXTG cell wall anchor motif 167 200 1.4E-5 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS06980 581e7f526b3a2d6c7575528911afc155 211 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 172 200 0.0013 T 28-03-2018 RK98_RS03195 8b340f74fdd84eb321a667a574d148cb 292 Pfam PF02649 Type I GTP cyclohydrolase folE2 33 286 8.8E-70 T 28-03-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 RK98_RS03195 8b340f74fdd84eb321a667a574d148cb 292 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 33 291 31.296 T 28-03-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 RK98_RS03195 8b340f74fdd84eb321a667a574d148cb 292 TIGRFAM TIGR00294 TIGR00294: GTP cyclohydrolase 14 287 3.8E-50 T 28-03-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 RK98_RS03195 8b340f74fdd84eb321a667a574d148cb 292 Gene3D G3DSA:3.10.270.10 32 289 4.6E-81 T 28-03-2018 RK98_RS14045 4e733debd7622ee3a7f147ee4a709f9c 306 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 305 1.7E-101 T 28-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 RK98_RS14045 4e733debd7622ee3a7f147ee4a709f9c 306 Hamap MF_01818 Ribonuclease BN [rbn]. 1 306 35.766 T 28-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 RK98_RS14045 4e733debd7622ee3a7f147ee4a709f9c 306 Pfam PF12706 Beta-lactamase superfamily domain 50 151 7.2E-9 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS14045 4e733debd7622ee3a7f147ee4a709f9c 306 Gene3D G3DSA:3.60.15.10 1 306 3.5E-54 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS14045 4e733debd7622ee3a7f147ee4a709f9c 306 SUPERFAMILY SSF56281 1 286 4.28E-71 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS00805 54d782a137f3f2a2c4bb8c312f12b7c0 246 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS00805 54d782a137f3f2a2c4bb8c312f12b7c0 246 SUPERFAMILY SSF52540 3 229 7.17E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS00805 54d782a137f3f2a2c4bb8c312f12b7c0 246 SMART SM00382 27 209 1.2E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS00805 54d782a137f3f2a2c4bb8c312f12b7c0 246 Gene3D G3DSA:3.40.50.300 1 231 1.4E-59 T 28-03-2018 RK98_RS00805 54d782a137f3f2a2c4bb8c312f12b7c0 246 Pfam PF00005 ABC transporter 19 161 8.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS14515 f031fb8d581f2b63ac9c55d90d002ae4 366 Pfam PF01926 50S ribosome-binding GTPase 162 232 3.3E-14 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS14515 f031fb8d581f2b63ac9c55d90d002ae4 366 SUPERFAMILY SSF52540 66 280 3.59E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14515 f031fb8d581f2b63ac9c55d90d002ae4 366 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 365 7.4E-147 T 28-03-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH RK98_RS14515 f031fb8d581f2b63ac9c55d90d002ae4 366 Gene3D G3DSA:3.40.50.300 56 224 5.6E-34 T 28-03-2018 RK98_RS13275 54d757665eff3d104758c75e07f5ae18 840 SUPERFAMILY SSF55729 639 820 1.22E-10 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS13275 54d757665eff3d104758c75e07f5ae18 840 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 195 301 2.4E-13 T 28-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RK98_RS13275 54d757665eff3d104758c75e07f5ae18 840 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 14 289 8.5E-13 T 28-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD RK98_RS13275 54d757665eff3d104758c75e07f5ae18 840 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 528 820 1.7E-78 T 28-03-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal RK98_RS13275 54d757665eff3d104758c75e07f5ae18 840 Gene3D G3DSA:3.40.630.30 628 813 2.7E-12 T 28-03-2018 RK98_RS13415 78bc0fe2a1e8d6377abda0ec748d8429 305 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 29 302 3.5E-91 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 RK98_RS13415 78bc0fe2a1e8d6377abda0ec748d8429 305 Gene3D G3DSA:1.10.3720.10 30 305 8.2E-44 T 28-03-2018 RK98_RS13415 78bc0fe2a1e8d6377abda0ec748d8429 305 SUPERFAMILY SSF161098 28 297 1.83E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS13415 78bc0fe2a1e8d6377abda0ec748d8429 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 302 3.7E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS08165 2c32352bd5ad465f44c6e3842d21071c 142 Pfam PF00011 Hsp20/alpha crystallin family 42 141 9.2E-18 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain RK98_RS08165 2c32352bd5ad465f44c6e3842d21071c 142 Gene3D G3DSA:2.60.40.790 4 142 6.9E-27 T 28-03-2018 IPR008978 HSP20-like chaperone RK98_RS08165 2c32352bd5ad465f44c6e3842d21071c 142 SUPERFAMILY SSF49764 29 131 4.19E-25 T 28-03-2018 IPR008978 HSP20-like chaperone RK98_RS14965 e7d4c4992b97f7e46d51d310a9ccc443 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.5E-20 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RK98_RS14965 e7d4c4992b97f7e46d51d310a9ccc443 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.5E-20 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RK98_RS14965 e7d4c4992b97f7e46d51d310a9ccc443 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.5E-20 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RK98_RS14965 e7d4c4992b97f7e46d51d310a9ccc443 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.114 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RK98_RS14965 e7d4c4992b97f7e46d51d310a9ccc443 66 Pfam PF01632 Ribosomal protein L35 2 62 8.5E-25 T 28-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14965 e7d4c4992b97f7e46d51d310a9ccc443 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.5E-25 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 RK98_RS14965 e7d4c4992b97f7e46d51d310a9ccc443 66 SUPERFAMILY SSF143034 2 64 2.49E-22 T 28-03-2018 RK98_RS14965 e7d4c4992b97f7e46d51d310a9ccc443 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 28-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS05415 b8b9f21125ad927f17c0253d79798470 341 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 37 320 1.3E-20 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 RK98_RS05415 b8b9f21125ad927f17c0253d79798470 341 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 159 186 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 RK98_RS05415 b8b9f21125ad927f17c0253d79798470 341 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 204 226 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site RK98_RS05415 b8b9f21125ad927f17c0253d79798470 341 SUPERFAMILY SSF52283 21 132 1.59E-40 T 28-03-2018 RK98_RS05415 b8b9f21125ad927f17c0253d79798470 341 Gene3D G3DSA:3.40.50.720 140 295 5.9E-39 T 28-03-2018 RK98_RS05415 b8b9f21125ad927f17c0253d79798470 341 SUPERFAMILY SSF51735 114 294 6.81E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05415 b8b9f21125ad927f17c0253d79798470 341 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 121 293 2.7E-53 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RK98_RS05415 b8b9f21125ad927f17c0253d79798470 341 Gene3D G3DSA:3.40.50.720 12 139 4.7E-31 T 28-03-2018 RK98_RS07675 3e42644a9e82ae097bf33a11e25d0e8b 272 Gene3D G3DSA:3.40.50.150 2 264 5.8E-28 T 28-03-2018 RK98_RS07675 3e42644a9e82ae097bf33a11e25d0e8b 272 SUPERFAMILY SSF53335 79 215 1.99E-5 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS01860 9f707392cce60a27a85fd724b6daf496 285 Pfam PF08797 HIRAN domain 200 245 3.6E-9 T 28-03-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 RK98_RS01860 9f707392cce60a27a85fd724b6daf496 285 SMART SM00910 176 276 3.2E-13 T 28-03-2018 IPR014905 HIRAN domain GO:0003676|GO:0008270|GO:0016818 Reactome: R-HSA-8866654 RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 SUPERFAMILY SSF53850 212 321 3.15E-39 T 28-03-2018 RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 SUPERFAMILY SSF53850 367 578 3.15E-39 T 28-03-2018 RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 Gene3D G3DSA:3.90.76.10 215 418 4.6E-18 T 28-03-2018 RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 PIRSF PIRSF002741 23 194 5.6E-10 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 PIRSF PIRSF002741 191 591 5.1E-20 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 SUPERFAMILY SSF53850 37 174 1.63E-14 T 28-03-2018 RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 Gene3D G3DSA:3.10.105.10 19 165 1.2E-15 T 28-03-2018 RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 Gene3D G3DSA:3.10.105.10 532 591 4.3E-5 T 28-03-2018 RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 47 117 2.5E-7 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 257 588 3.1E-22 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain RK98_RS05255 85eab4bae2fda1e98a6a2e0d45981014 591 Gene3D G3DSA:3.40.190.10 425 531 3.7E-11 T 28-03-2018 RK98_RS12205 ca3cd667b576943f517fd3ac8b0e067f 238 Gene3D G3DSA:3.10.20.120 121 237 1.0E-25 T 28-03-2018 RK98_RS12205 ca3cd667b576943f517fd3ac8b0e067f 238 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 167 190 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS12205 ca3cd667b576943f517fd3ac8b0e067f 238 SUPERFAMILY SSF54334 139 236 1.06E-22 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS09060 4c79d19b384c6ec7aa631a83c8f1c2fa 286 SMART SM00382 32 223 2.8E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS09060 4c79d19b384c6ec7aa631a83c8f1c2fa 286 SUPERFAMILY SSF52540 3 237 3.24E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09060 4c79d19b384c6ec7aa631a83c8f1c2fa 286 Pfam PF00005 ABC transporter 24 174 6.6E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS09060 4c79d19b384c6ec7aa631a83c8f1c2fa 286 Gene3D G3DSA:3.40.50.300 1 273 1.0E-66 T 28-03-2018 RK98_RS09060 4c79d19b384c6ec7aa631a83c8f1c2fa 286 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 276 7.3E-111 T 28-03-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 RK98_RS09060 4c79d19b384c6ec7aa631a83c8f1c2fa 286 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS08575 5e43920a9fc918d64ef4d80dabda9649 265 Gene3D G3DSA:3.40.190.80 147 265 1.5E-20 T 28-03-2018 RK98_RS08575 5e43920a9fc918d64ef4d80dabda9649 265 Pfam PF00459 Inositol monophosphatase family 19 256 2.4E-36 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS08575 5e43920a9fc918d64ef4d80dabda9649 265 Gene3D G3DSA:3.30.540.10 1 145 1.8E-32 T 28-03-2018 RK98_RS08575 5e43920a9fc918d64ef4d80dabda9649 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 205 229 4.0E-22 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS08575 5e43920a9fc918d64ef4d80dabda9649 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 4.0E-22 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS08575 5e43920a9fc918d64ef4d80dabda9649 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 174 195 4.0E-22 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS08575 5e43920a9fc918d64ef4d80dabda9649 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 4.0E-22 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS08575 5e43920a9fc918d64ef4d80dabda9649 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 4.0E-22 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS08575 5e43920a9fc918d64ef4d80dabda9649 265 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 4.0E-22 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS08575 5e43920a9fc918d64ef4d80dabda9649 265 SUPERFAMILY SSF56655 4 256 3.14E-56 T 28-03-2018 RK98_RS14745 d4cb6291cfca07bda1567f65ab017c87 341 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 341 1.5E-143 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RK98_RS14745 d4cb6291cfca07bda1567f65ab017c87 341 SUPERFAMILY SSF111337 2 341 2.62E-137 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RK98_RS14745 d4cb6291cfca07bda1567f65ab017c87 341 Pfam PF02547 Queuosine biosynthesis protein 4 340 2.0E-140 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RK98_RS14745 d4cb6291cfca07bda1567f65ab017c87 341 Gene3D G3DSA:3.40.1780.10 173 341 2.4E-65 T 28-03-2018 RK98_RS14745 d4cb6291cfca07bda1567f65ab017c87 341 Gene3D G3DSA:3.40.1780.10 1 133 2.0E-43 T 28-03-2018 RK98_RS14745 d4cb6291cfca07bda1567f65ab017c87 341 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 46.111 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 RK98_RS12445 36a2bfb0e2c148d617e7aa20502d6488 72 SMART SM01409 8 62 7.7E-12 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RK98_RS12445 36a2bfb0e2c148d617e7aa20502d6488 72 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 7.7E-13 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS12445 36a2bfb0e2c148d617e7aa20502d6488 72 SUPERFAMILY SSF63562 1 64 1.74E-17 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RK98_RS12445 36a2bfb0e2c148d617e7aa20502d6488 72 Gene3D G3DSA:3.90.940.10 1 71 1.8E-16 T 28-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RK98_RS12445 36a2bfb0e2c148d617e7aa20502d6488 72 Pfam PF01192 RNA polymerase Rpb6 9 61 4.5E-15 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 RK98_RS12445 36a2bfb0e2c148d617e7aa20502d6488 72 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 13.788 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 RK98_RS08755 17ebc624bb8d5dc29510cf1842c43adf 201 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS08755 17ebc624bb8d5dc29510cf1842c43adf 201 SMART SM00382 23 199 1.3E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS08755 17ebc624bb8d5dc29510cf1842c43adf 201 Pfam PF00005 ABC transporter 23 154 5.0E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS08755 17ebc624bb8d5dc29510cf1842c43adf 201 SUPERFAMILY SSF52540 5 200 3.08E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS08755 17ebc624bb8d5dc29510cf1842c43adf 201 Gene3D G3DSA:3.40.50.300 1 201 8.3E-51 T 28-03-2018 RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 160 215 1.7E-5 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 162 185 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01898 Bacterial superantigen superfamily signature 216 232 9.1E-18 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01898 Bacterial superantigen superfamily signature 162 175 9.1E-18 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01898 Bacterial superantigen superfamily signature 175 189 9.1E-18 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01898 Bacterial superantigen superfamily signature 117 130 9.1E-18 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01898 Bacterial superantigen superfamily signature 88 114 9.1E-18 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 195 211 2.3E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 170 192 2.3E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 16 34 2.3E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 37 54 2.3E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 221 234 2.3E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 92 115 2.3E-16 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 Gene3D G3DSA:2.40.50.110 54 118 5.8E-25 T 28-03-2018 RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 46 128 1.7E-30 T 28-03-2018 IPR015282 Staphylococcal superantigen-like OB-fold domain RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 Gene3D G3DSA:3.10.20.120 119 234 1.1E-35 T 28-03-2018 RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 4.3E-25 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01800 Staphylococcus aureus exotoxin signature 161 177 4.3E-25 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01800 Staphylococcus aureus exotoxin signature 201 216 4.3E-25 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 PRINTS PR01800 Staphylococcus aureus exotoxin signature 119 130 4.3E-25 T 28-03-2018 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 SUPERFAMILY SSF50203 36 129 2.51E-29 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS04050 d31850a8b91af0f88f576ea41933a6f6 234 SUPERFAMILY SSF54334 132 233 9.16E-29 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS10620 28ff6867415689f825a8a25c7e4c849b 73 Pfam PF11673 Protein of unknown function (DUF3269) 1 73 6.9E-52 T 28-03-2018 IPR021687 Protein of unknown function DUF3269 RK98_RS03065 8e7e95c1e0a5b11730c28feac7f0c029 327 Pfam PF00288 GHMP kinases N terminal domain 92 149 2.5E-7 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 RK98_RS03065 8e7e95c1e0a5b11730c28feac7f0c029 327 Gene3D G3DSA:3.30.230.10 2 172 4.8E-60 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS03065 8e7e95c1e0a5b11730c28feac7f0c029 327 TIGRFAM TIGR01240 mevDPdecarb: diphosphomevalonate decarboxylase 6 308 1.7E-120 T 28-03-2018 IPR029765 Diphosphomevalonate decarboxylase GO:0004163|GO:0005829|GO:0019287 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168|Reactome: R-HSA-446199 RK98_RS03065 8e7e95c1e0a5b11730c28feac7f0c029 327 SUPERFAMILY SSF54211 4 168 1.52E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS03065 8e7e95c1e0a5b11730c28feac7f0c029 327 Gene3D G3DSA:3.30.70.890 173 324 7.0E-45 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03065 8e7e95c1e0a5b11730c28feac7f0c029 327 SUPERFAMILY SSF55060 176 311 1.05E-43 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03065 8e7e95c1e0a5b11730c28feac7f0c029 327 Pfam PF08544 GHMP kinases C terminal 221 308 9.4E-7 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03065 8e7e95c1e0a5b11730c28feac7f0c029 327 PIRSF PIRSF015950 2 326 3.1E-120 T 28-03-2018 IPR005935 Diphosphomevalonate/phosphomevalonate decarboxylase GO:0008299|GO:0016831 KEGG: 00900+4.1.1.33|MetaCyc: PWY-7391|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-2426168|Reactome: R-HSA-446199 RK98_RS06270 851977fe2bd37e71bcec0a7be89c35f2 109 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 106 1.9E-23 T 28-03-2018 IPR008407 Branched-chain amino acid transport, AzlD RK98_RS00010 fe529fac4024bd166673e376461137b5 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 5.7E-84 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 5.7E-84 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 5.7E-84 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 5.7E-84 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 5.7E-84 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 5.7E-84 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 5.7E-84 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 5.7E-84 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 5.7E-84 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 Pfam PF00365 Phosphofructokinase 3 277 6.3E-110 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 Gene3D G3DSA:3.40.50.450 1 184 3.1E-75 T 28-03-2018 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 PIRSF PIRSF000532 1 322 9.6E-118 T 28-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 Gene3D G3DSA:3.40.50.450 185 302 1.9E-16 T 28-03-2018 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 28-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 321 46.584 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 300 4.2E-129 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 RK98_RS00010 fe529fac4024bd166673e376461137b5 322 SUPERFAMILY SSF53784 1 305 5.89E-112 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 RK98_RS03060 a1a8fe6a2a8acdd32477ab0023db5004 358 Pfam PF00288 GHMP kinases N terminal domain 103 174 8.8E-13 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 RK98_RS03060 a1a8fe6a2a8acdd32477ab0023db5004 358 TIGRFAM TIGR01220 Pmev_kin_Gr_pos: phosphomevalonate kinase 2 358 1.7E-176 T 28-03-2018 IPR005917 Phosphomevalonate kinase KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922 RK98_RS03060 a1a8fe6a2a8acdd32477ab0023db5004 358 SUPERFAMILY SSF55060 214 354 1.1E-33 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03060 a1a8fe6a2a8acdd32477ab0023db5004 358 SUPERFAMILY SSF54211 1 230 8.35E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS03060 a1a8fe6a2a8acdd32477ab0023db5004 358 PRINTS PR00959 Mevalonate kinase family signature 6 30 3.6E-6 T 28-03-2018 RK98_RS03060 a1a8fe6a2a8acdd32477ab0023db5004 358 PRINTS PR00959 Mevalonate kinase family signature 112 134 3.6E-6 T 28-03-2018 RK98_RS03060 a1a8fe6a2a8acdd32477ab0023db5004 358 PRINTS PR00959 Mevalonate kinase family signature 313 330 3.6E-6 T 28-03-2018 RK98_RS03060 a1a8fe6a2a8acdd32477ab0023db5004 358 Pfam PF08544 GHMP kinases C terminal 261 347 1.1E-10 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03060 a1a8fe6a2a8acdd32477ab0023db5004 358 Gene3D G3DSA:3.30.70.890 221 358 5.2E-26 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain RK98_RS03060 a1a8fe6a2a8acdd32477ab0023db5004 358 Gene3D G3DSA:3.30.230.10 1 220 1.1E-44 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS11650 f8c2795dda2bf5c8486a85d9b1083cbf 87 Gene3D G3DSA:3.30.1280.10 1 80 1.2E-21 T 28-03-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS11650 f8c2795dda2bf5c8486a85d9b1083cbf 87 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 79 4.7E-24 T 28-03-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS11650 f8c2795dda2bf5c8486a85d9b1083cbf 87 SUPERFAMILY SSF82697 2 81 7.5E-22 T 28-03-2018 RK98_RS11650 f8c2795dda2bf5c8486a85d9b1083cbf 87 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 4 79 4.3E-21 T 28-03-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS11650 f8c2795dda2bf5c8486a85d9b1083cbf 87 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 79 17.916 T 28-03-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS11650 f8c2795dda2bf5c8486a85d9b1083cbf 87 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 81 3.0E-35 T 28-03-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS09290 27959d1bb295bc2403839e9710ecce38 327 Gene3D G3DSA:3.40.50.1980 155 327 2.7E-34 T 28-03-2018 RK98_RS09290 27959d1bb295bc2403839e9710ecce38 327 Pfam PF01497 Periplasmic binding protein 57 294 1.0E-32 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RK98_RS09290 27959d1bb295bc2403839e9710ecce38 327 SUPERFAMILY SSF53807 39 318 2.0E-61 T 28-03-2018 RK98_RS09290 27959d1bb295bc2403839e9710ecce38 327 Gene3D G3DSA:3.40.50.1980 25 154 1.4E-30 T 28-03-2018 RK98_RS12475 e4be3d9f9b0ee033f53a74bf82c996d8 311 SUPERFAMILY SSF53328 3 202 9.03E-65 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RK98_RS12475 e4be3d9f9b0ee033f53a74bf82c996d8 311 SUPERFAMILY SSF50486 204 302 1.11E-29 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 RK98_RS12475 e4be3d9f9b0ee033f53a74bf82c996d8 311 Pfam PF00551 Formyl transferase 3 177 4.3E-40 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RK98_RS12475 e4be3d9f9b0ee033f53a74bf82c996d8 311 Gene3D G3DSA:3.10.25.10 206 310 7.5E-31 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RK98_RS12475 e4be3d9f9b0ee033f53a74bf82c996d8 311 Pfam PF02911 Formyl transferase, C-terminal domain 204 301 1.3E-27 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RK98_RS12475 e4be3d9f9b0ee033f53a74bf82c996d8 311 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 305 3.0E-107 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 RK98_RS12475 e4be3d9f9b0ee033f53a74bf82c996d8 311 Gene3D G3DSA:3.40.50.170 1 205 5.4E-67 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RK98_RS12475 e4be3d9f9b0ee033f53a74bf82c996d8 311 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 132 155 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 RK98_RS12475 e4be3d9f9b0ee033f53a74bf82c996d8 311 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 304 36.3 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 PIRSF PIRSF015592 1 210 9.6E-81 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 Pfam PF01470 Pyroglutamyl peptidase 1 200 3.6E-94 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 209 5.8E-68 T 28-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 28-03-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 SUPERFAMILY SSF53182 1 199 1.12E-67 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 5.6E-45 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 5.6E-45 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 5.6E-45 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 5.6E-45 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 5.6E-45 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 1 199 36.344 T 28-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 Gene3D G3DSA:3.40.630.20 1 212 6.1E-64 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like RK98_RS06445 56e3e6803212bb07a92d81c70873dacf 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 28-03-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site RK98_RS03550 5380c2f9c221536445aa4a854700bf4e 310 Gene3D G3DSA:3.40.50.1100 43 140 6.4E-41 T 28-03-2018 RK98_RS03550 5380c2f9c221536445aa4a854700bf4e 310 Gene3D G3DSA:3.40.50.1100 141 309 8.7E-56 T 28-03-2018 RK98_RS03550 5380c2f9c221536445aa4a854700bf4e 310 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 306 7.0E-140 T 28-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 RK98_RS03550 5380c2f9c221536445aa4a854700bf4e 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 35 53 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 RK98_RS03550 5380c2f9c221536445aa4a854700bf4e 310 SUPERFAMILY SSF53686 5 306 6.16E-103 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS03550 5380c2f9c221536445aa4a854700bf4e 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 9 294 1.5E-71 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS03550 5380c2f9c221536445aa4a854700bf4e 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 306 7.5E-133 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 RK98_RS10310 cd1fb9779d443c46e8abeb9ad773d7ca 500 Pfam PF08764 Staphylococcus aureus coagulase 49 266 3.0E-17 T 28-03-2018 IPR014874 Staphylcoagulase, N-terminal RK98_RS10310 cd1fb9779d443c46e8abeb9ad773d7ca 500 SUPERFAMILY SSF101094 155 285 7.98E-37 T 28-03-2018 IPR014874 Staphylcoagulase, N-terminal RK98_RS10310 cd1fb9779d443c46e8abeb9ad773d7ca 500 SUPERFAMILY SSF101094 7 154 2.33E-32 T 28-03-2018 IPR014874 Staphylcoagulase, N-terminal RK98_RS03760 42e76036cc12f514ee7526e0fc83be24 565 Gene3D G3DSA:3.40.50.300 1 166 1.7E-42 T 28-03-2018 RK98_RS03760 42e76036cc12f514ee7526e0fc83be24 565 Gene3D G3DSA:1.20.272.10 243 356 1.5E-10 T 28-03-2018 RK98_RS03760 42e76036cc12f514ee7526e0fc83be24 565 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 346 3.9E-139 T 28-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 RK98_RS03760 42e76036cc12f514ee7526e0fc83be24 565 SMART SM00382 37 189 1.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS03760 42e76036cc12f514ee7526e0fc83be24 565 Gene3D G3DSA:1.10.8.60 167 242 6.1E-19 T 28-03-2018 RK98_RS03760 42e76036cc12f514ee7526e0fc83be24 565 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 6.5E-6 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS03760 42e76036cc12f514ee7526e0fc83be24 565 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 6.5E-6 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 RK98_RS03760 42e76036cc12f514ee7526e0fc83be24 565 SUPERFAMILY SSF52540 34 222 1.65E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03760 42e76036cc12f514ee7526e0fc83be24 565 SUPERFAMILY SSF48019 244 349 1.11E-9 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 RK98_RS03760 42e76036cc12f514ee7526e0fc83be24 565 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.0E-47 T 28-03-2018 RK98_RS10040 dc4361ba41a368caaf98520888a16b38 154 Gene3D G3DSA:3.40.630.30 3 154 4.3E-32 T 28-03-2018 RK98_RS10040 dc4361ba41a368caaf98520888a16b38 154 Pfam PF00583 Acetyltransferase (GNAT) family 23 129 3.6E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS10040 dc4361ba41a368caaf98520888a16b38 154 SUPERFAMILY SSF55729 10 152 4.47E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS10040 dc4361ba41a368caaf98520888a16b38 154 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 18 148 1.0E-34 T 28-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 RK98_RS03395 20838b07f7249b43b73953b9778b47d4 215 SUPERFAMILY SSF51161 5 172 2.63E-53 T 28-03-2018 IPR011004 Trimeric LpxA-like RK98_RS03395 20838b07f7249b43b73953b9778b47d4 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 110 1.3E-6 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS03395 20838b07f7249b43b73953b9778b47d4 215 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 152 1.9E-8 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS03395 20838b07f7249b43b73953b9778b47d4 215 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 8 167 1.6E-75 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 RK98_RS03395 20838b07f7249b43b73953b9778b47d4 215 Gene3D G3DSA:2.160.10.10 61 215 3.4E-38 T 28-03-2018 RK98_RS03395 20838b07f7249b43b73953b9778b47d4 215 PIRSF PIRSF000441 1 213 3.0E-82 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 RK98_RS03395 20838b07f7249b43b73953b9778b47d4 215 Gene3D G3DSA:1.10.3130.10 2 60 1.3E-21 T 28-03-2018 RK98_RS11180 f605d3487dc5120d8179ead2662bffc7 213 Pfam PF01300 Telomere recombination 18 195 8.7E-40 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 RK98_RS11180 f605d3487dc5120d8179ead2662bffc7 213 Gene3D G3DSA:3.90.870.10 2 210 3.6E-38 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain RK98_RS11180 f605d3487dc5120d8179ead2662bffc7 213 SUPERFAMILY SSF55821 5 206 2.2E-36 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain RK98_RS13510 a9fd6d4f7e9667398201079f7cc6d8de 89 Pfam PF00708 Acylphosphatase 5 87 8.2E-23 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RK98_RS13510 a9fd6d4f7e9667398201079f7cc6d8de 89 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RK98_RS13510 a9fd6d4f7e9667398201079f7cc6d8de 89 SUPERFAMILY SSF54975 2 87 3.27E-24 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 RK98_RS13510 a9fd6d4f7e9667398201079f7cc6d8de 89 Gene3D G3DSA:3.30.70.100 1 89 9.1E-25 T 28-03-2018 RK98_RS10305 04cdb39b22518bf002936028c440523e 935 Pfam PF00746 LPXTG cell wall anchor motif 894 932 2.6E-5 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS10305 04cdb39b22518bf002936028c440523e 935 Pfam PF04650 YSIRK type signal peptide 4 27 1.5E-8 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS10305 04cdb39b22518bf002936028c440523e 935 Gene3D G3DSA:2.60.40.1280 229 369 3.0E-37 T 28-03-2018 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 RK98_RS10305 04cdb39b22518bf002936028c440523e 935 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 3 30 4.4E-7 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS10305 04cdb39b22518bf002936028c440523e 935 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 376 525 1.0E-39 T 28-03-2018 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 RK98_RS10305 04cdb39b22518bf002936028c440523e 935 SUPERFAMILY SSF49401 229 369 5.16E-36 T 28-03-2018 IPR008966 Adhesion domain RK98_RS10305 04cdb39b22518bf002936028c440523e 935 Gene3D G3DSA:2.60.40.1290 373 549 3.1E-47 T 28-03-2018 RK98_RS10305 04cdb39b22518bf002936028c440523e 935 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 898 931 9.5E-7 T 28-03-2018 RK98_RS10305 04cdb39b22518bf002936028c440523e 935 SUPERFAMILY SSF49401 371 555 2.36E-55 T 28-03-2018 IPR008966 Adhesion domain RK98_RS09295 03a63557f35268720693cf465f733b58 343 Pfam PF01032 FecCD transport family 31 338 1.9E-98 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RK98_RS09295 03a63557f35268720693cf465f733b58 343 Gene3D G3DSA:1.10.3470.10 15 342 4.8E-69 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS09295 03a63557f35268720693cf465f733b58 343 SUPERFAMILY SSF81345 13 338 4.45E-84 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS03545 d4906f56ade3e5111c779206f443344b 267 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 5 254 2.1E-94 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 RK98_RS03545 d4906f56ade3e5111c779206f443344b 267 Pfam PF00809 Pterin binding enzyme 7 241 9.3E-84 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RK98_RS03545 d4906f56ade3e5111c779206f443344b 267 Gene3D G3DSA:3.20.20.20 1 267 8.4E-94 T 28-03-2018 RK98_RS03545 d4906f56ade3e5111c779206f443344b 267 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 6 21 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RK98_RS03545 d4906f56ade3e5111c779206f443344b 267 SUPERFAMILY SSF51717 4 257 1.28E-86 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RK98_RS03545 d4906f56ade3e5111c779206f443344b 267 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 40 53 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 RK98_RS00310 5b81c02641f38b2d069a93a333382183 214 SUPERFAMILY SSF53335 29 207 8.95E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS00310 5b81c02641f38b2d069a93a333382183 214 Gene3D G3DSA:3.40.50.150 1 210 1.4E-23 T 28-03-2018 RK98_RS00310 5b81c02641f38b2d069a93a333382183 214 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 211 28.795 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RK98_RS00310 5b81c02641f38b2d069a93a333382183 214 Pfam PF02390 Putative methyltransferase 38 206 4.6E-50 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RK98_RS00310 5b81c02641f38b2d069a93a333382183 214 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 31 208 5.4E-55 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 RK98_RS03970 b8ef0774ac38bd2a4e8f60483ba31d17 260 Pfam PF04507 Csa1 family 1 251 4.4E-104 T 28-03-2018 IPR007595 Csa1 family RK98_RS03970 b8ef0774ac38bd2a4e8f60483ba31d17 260 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 257 2.3E-126 T 28-03-2018 IPR007595 Csa1 family RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 PIRSF PIRSF038928 1 488 1.5E-210 T 28-03-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 ProSitePatterns PS00438 Catalase proximal active site signature. 45 61 - T 28-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 Pfam PF06628 Catalase-related immune-responsive 422 483 1.9E-22 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 335 343 - T 28-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 Gene3D G3DSA:2.40.180.10 1 359 5.5E-158 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 SMART SM01060 9 398 4.3E-270 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 SUPERFAMILY SSF56634 2 499 1.23E-201 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 Pfam PF00199 Catalase 12 394 1.7E-182 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 PRINTS PR00067 Catalase signature 85 103 5.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 PRINTS PR00067 Catalase signature 22 45 5.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 PRINTS PR00067 Catalase signature 106 123 5.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 PRINTS PR00067 Catalase signature 290 317 5.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 PRINTS PR00067 Catalase signature 125 143 5.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS13120 e0b498c2454b38da16e495af1648118e 505 PRINTS PR00067 Catalase signature 322 348 5.7E-69 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 RK98_RS10370 c93d9c87cfd18214c282c7165e5678de 186 SMART SM00855 1 146 1.5E-10 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RK98_RS10370 c93d9c87cfd18214c282c7165e5678de 186 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 1 182 5.8E-35 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RK98_RS10370 c93d9c87cfd18214c282c7165e5678de 186 PIRSF PIRSF000709 1 164 1.2E-6 T 28-03-2018 RK98_RS10370 c93d9c87cfd18214c282c7165e5678de 186 SUPERFAMILY SSF53254 1 185 3.44E-42 T 28-03-2018 IPR029033 Histidine phosphatase superfamily RK98_RS10370 c93d9c87cfd18214c282c7165e5678de 186 Gene3D G3DSA:3.40.50.1240 1 185 9.6E-37 T 28-03-2018 IPR029033 Histidine phosphatase superfamily RK98_RS07700 2206b5221bb15291ba16b61fbd31a479 271 SMART SM00382 30 228 5.1E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS07700 2206b5221bb15291ba16b61fbd31a479 271 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS07700 2206b5221bb15291ba16b61fbd31a479 271 Pfam PF00005 ABC transporter 22 178 3.6E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS07700 2206b5221bb15291ba16b61fbd31a479 271 SUPERFAMILY SSF52540 6 250 1.08E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07700 2206b5221bb15291ba16b61fbd31a479 271 Gene3D G3DSA:3.40.50.300 1 265 4.3E-61 T 28-03-2018 RK98_RS14655 cf86306b0bf7fd17eecb6c5142262ac2 339 Gene3D G3DSA:3.20.20.30 3 334 1.1E-62 T 28-03-2018 RK98_RS14655 cf86306b0bf7fd17eecb6c5142262ac2 339 Pfam PF00296 Luciferase-like monooxygenase 18 298 2.2E-35 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RK98_RS14655 cf86306b0bf7fd17eecb6c5142262ac2 339 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 6 325 2.7E-125 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 RK98_RS14655 cf86306b0bf7fd17eecb6c5142262ac2 339 SUPERFAMILY SSF51679 3 326 8.77E-77 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RK98_RS10995 99adfa1eaa3a0fcf8a282787c59ec16f 119 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 4 108 4.8E-33 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 RK98_RS10995 99adfa1eaa3a0fcf8a282787c59ec16f 119 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 104 3.4E-17 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 RK98_RS10995 99adfa1eaa3a0fcf8a282787c59ec16f 119 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 90 107 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 RK98_RS10995 99adfa1eaa3a0fcf8a282787c59ec16f 119 Gene3D G3DSA:2.60.300.12 3 112 2.4E-34 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 RK98_RS10995 99adfa1eaa3a0fcf8a282787c59ec16f 119 SUPERFAMILY SSF89360 3 97 7.85E-26 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 RK98_RS07375 e8f606d4d95e93c318315b1ee8c653c0 94 SUPERFAMILY SSF55729 3 92 2.96E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS07375 e8f606d4d95e93c318315b1ee8c653c0 94 Gene3D G3DSA:3.40.630.30 2 93 3.2E-19 T 28-03-2018 RK98_RS07375 e8f606d4d95e93c318315b1ee8c653c0 94 Pfam PF14542 GCN5-related N-acetyl-transferase 12 91 1.3E-25 T 28-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 Gene3D G3DSA:3.40.50.2300 173 339 1.0E-25 T 28-03-2018 RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 SMART SM00354 1 71 1.3E-30 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 SUPERFAMILY SSF47413 1 59 5.91E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.9E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 Gene3D G3DSA:1.10.260.40 2 57 2.2E-21 T 28-03-2018 RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 SUPERFAMILY SSF53822 59 331 8.78E-39 T 28-03-2018 IPR028082 Periplasmic binding protein-like I RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 Gene3D G3DSA:3.40.50.2300 58 172 3.4E-15 T 28-03-2018 RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 7.4E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 7.4E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS14065 efb1a26fcf71781fba05c0dc7e867e7b 339 Pfam PF13377 Periplasmic binding protein-like domain 175 337 5.8E-19 T 28-03-2018 RK98_RS07380 0a4449b059b992f5a88c2602b876770e 144 Pfam PF01047 MarR family 34 91 2.6E-16 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS07380 0a4449b059b992f5a88c2602b876770e 144 Gene3D G3DSA:1.10.10.10 1 144 4.4E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07380 0a4449b059b992f5a88c2602b876770e 144 SMART SM00347 27 127 3.4E-22 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS07380 0a4449b059b992f5a88c2602b876770e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 8.0E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS07380 0a4449b059b992f5a88c2602b876770e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 8.0E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS07380 0a4449b059b992f5a88c2602b876770e 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 8.0E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS07380 0a4449b059b992f5a88c2602b876770e 144 SUPERFAMILY SSF46785 5 140 1.19E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07380 0a4449b059b992f5a88c2602b876770e 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 66 100 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site RK98_RS06120 fbc1ae2f3c9772326f7658f71fec2def 669 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 27 141 9.6E-26 T 28-03-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 RK98_RS06120 fbc1ae2f3c9772326f7658f71fec2def 669 SUPERFAMILY SSF56519 141 328 1.7E-41 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RK98_RS06120 fbc1ae2f3c9772326f7658f71fec2def 669 SUPERFAMILY SSF56601 329 662 1.85E-74 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like RK98_RS06120 fbc1ae2f3c9772326f7658f71fec2def 669 Pfam PF00905 Penicillin binding protein transpeptidase domain 347 658 3.3E-71 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 RK98_RS06120 fbc1ae2f3c9772326f7658f71fec2def 669 Gene3D G3DSA:3.10.450.100 24 136 3.2E-22 T 28-03-2018 RK98_RS06120 fbc1ae2f3c9772326f7658f71fec2def 669 Pfam PF03717 Penicillin-binding Protein dimerisation domain 149 310 1.1E-29 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 RK98_RS06120 fbc1ae2f3c9772326f7658f71fec2def 669 SUPERFAMILY SSF54427 28 139 5.7E-28 T 28-03-2018 IPR032710 NTF2-like domain RK98_RS06120 fbc1ae2f3c9772326f7658f71fec2def 669 Gene3D G3DSA:3.90.1310.10 137 328 9.0E-29 T 28-03-2018 RK98_RS06120 fbc1ae2f3c9772326f7658f71fec2def 669 Gene3D G3DSA:3.40.710.10 329 666 3.4E-59 T 28-03-2018 RK98_RS06260 5d026d7aadb62642b4dcc2f786951fba 312 Pfam PF09991 Predicted membrane protein (DUF2232) 20 298 2.7E-62 T 28-03-2018 IPR018710 Protein of unknown function DUF2232 RK98_RS03440 4326de74172f5e8d803100da1aa03a7c 404 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 194 403 1.8E-62 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 RK98_RS03440 4326de74172f5e8d803100da1aa03a7c 404 Pfam PF07670 Nucleoside recognition 93 190 1.7E-5 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RK98_RS03440 4326de74172f5e8d803100da1aa03a7c 404 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 3.3E-21 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 RK98_RS03150 614412dcd0eb8eb26c518159bfe129bc 458 Gene3D G3DSA:3.40.50.980 1 120 2.0E-9 T 28-03-2018 RK98_RS03150 614412dcd0eb8eb26c518159bfe129bc 458 Pfam PF00501 AMP-binding enzyme 128 361 2.2E-27 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RK98_RS03150 614412dcd0eb8eb26c518159bfe129bc 458 SUPERFAMILY SSF56801 2 455 9.55E-70 T 28-03-2018 RK98_RS03150 614412dcd0eb8eb26c518159bfe129bc 458 Gene3D G3DSA:3.40.50.980 121 138 0.086 T 28-03-2018 RK98_RS03150 614412dcd0eb8eb26c518159bfe129bc 458 Gene3D G3DSA:3.40.50.980 139 284 3.0E-17 T 28-03-2018 RK98_RS03150 614412dcd0eb8eb26c518159bfe129bc 458 Pfam PF13193 AMP-binding enzyme C-terminal domain 371 443 7.6E-6 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain RK98_RS03150 614412dcd0eb8eb26c518159bfe129bc 458 Gene3D G3DSA:2.30.38.10 285 354 1.3E-8 T 28-03-2018 RK98_RS03150 614412dcd0eb8eb26c518159bfe129bc 458 ProSitePatterns PS00455 Putative AMP-binding domain signature. 131 142 - T 28-03-2018 IPR020845 AMP-binding, conserved site RK98_RS03150 614412dcd0eb8eb26c518159bfe129bc 458 Gene3D G3DSA:3.30.300.30 356 457 7.3E-19 T 28-03-2018 RK98_RS08390 b523ab526d1de04a7dde6962579e0e72 349 SUPERFAMILY SSF51395 26 346 4.58E-80 T 28-03-2018 RK98_RS08390 b523ab526d1de04a7dde6962579e0e72 349 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 8 332 4.0E-128 T 28-03-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 RK98_RS08390 b523ab526d1de04a7dde6962579e0e72 349 Gene3D G3DSA:3.20.20.70 6 345 4.2E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS08390 b523ab526d1de04a7dde6962579e0e72 349 PIRSF PIRSF003314 3 343 6.5E-126 T 28-03-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 RK98_RS08390 b523ab526d1de04a7dde6962579e0e72 349 Pfam PF01070 FMN-dependent dehydrogenase 161 329 6.9E-20 T 28-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 RK98_RS08390 b523ab526d1de04a7dde6962579e0e72 349 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 6 333 36.762 T 28-03-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 RK98_RS00865 e8deed46d3c852a640dfd5b3a3577081 154 SUPERFAMILY SSF47413 10 62 7.24E-10 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS00865 e8deed46d3c852a640dfd5b3a3577081 154 Gene3D G3DSA:1.10.260.40 9 152 7.3E-10 T 28-03-2018 RK98_RS00865 e8deed46d3c852a640dfd5b3a3577081 154 SMART SM00530 13 67 0.0013 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS00865 e8deed46d3c852a640dfd5b3a3577081 154 Pfam PF01381 Helix-turn-helix 15 61 2.3E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 543 666 9.3E-49 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 Gene3D G3DSA:3.30.1360.60 439 513 7.4E-26 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 416 499 3.4E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 Pfam PF02378 Phosphotransferase system, EIIC 13 356 1.4E-95 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 Pfam PF00367 phosphotransferase system, EIIB 444 475 1.2E-14 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 Gene3D G3DSA:2.70.70.10 535 688 3.3E-54 T 28-03-2018 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 515 2.6E-256 T 28-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 453 470 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 SUPERFAMILY SSF51261 539 685 4.19E-50 T 28-03-2018 IPR011055 Duplicated hybrid motif RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 606 618 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 SUPERFAMILY SSF55604 442 513 4.05E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 RK98_RS07280 e89c6ca1d06d310e696ce157f4b36112 688 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 544 664 1.1E-42 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 RK98_RS03705 d8071fb4927b9b36a96f78b14a61ea8a 308 Gene3D G3DSA:3.40.50.300 2 148 3.8E-28 T 28-03-2018 RK98_RS03705 d8071fb4927b9b36a96f78b14a61ea8a 308 Gene3D G3DSA:1.20.272.10 190 306 2.0E-18 T 28-03-2018 RK98_RS03705 d8071fb4927b9b36a96f78b14a61ea8a 308 SUPERFAMILY SSF52540 9 172 1.3E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03705 d8071fb4927b9b36a96f78b14a61ea8a 308 Pfam PF13177 DNA polymerase III, delta subunit 4 150 1.3E-45 T 28-03-2018 RK98_RS03705 d8071fb4927b9b36a96f78b14a61ea8a 308 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 217 304 8.0E-5 T 28-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 RK98_RS09810 16f38058a863fcf49f909411bcb3d33d 69 SUPERFAMILY SSF55008 5 68 3.67E-8 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RK98_RS09810 16f38058a863fcf49f909411bcb3d33d 69 Pfam PF00403 Heavy-metal-associated domain 19 66 6.2E-5 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 RK98_RS09810 16f38058a863fcf49f909411bcb3d33d 69 Gene3D G3DSA:3.30.70.100 6 68 3.8E-7 T 28-03-2018 RK98_RS02275 a1a35e1b0873118e7644000c72400a4d 307 Gene3D G3DSA:3.30.43.10 15 87 6.8E-21 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 RK98_RS02275 a1a35e1b0873118e7644000c72400a4d 307 Gene3D G3DSA:3.90.78.10 204 300 2.3E-28 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS02275 a1a35e1b0873118e7644000c72400a4d 307 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 300 8.6E-30 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS02275 a1a35e1b0873118e7644000c72400a4d 307 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 25 301 1.6E-71 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS02275 a1a35e1b0873118e7644000c72400a4d 307 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 307 94.034 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS02275 a1a35e1b0873118e7644000c72400a4d 307 Gene3D G3DSA:3.30.465.10 91 203 4.2E-36 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 RK98_RS02275 a1a35e1b0873118e7644000c72400a4d 307 SUPERFAMILY SSF56176 5 196 3.07E-46 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 RK98_RS02275 a1a35e1b0873118e7644000c72400a4d 307 SUPERFAMILY SSF56194 198 303 1.44E-38 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS02275 a1a35e1b0873118e7644000c72400a4d 307 Pfam PF01565 FAD binding domain 38 166 5.4E-26 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 RK98_RS06960 4baf6d11800a39f9dedebcdcd7419571 272 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 256 1.5E-96 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RK98_RS06960 4baf6d11800a39f9dedebcdcd7419571 272 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 6 260 8.2E-89 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RK98_RS06960 4baf6d11800a39f9dedebcdcd7419571 272 Gene3D G3DSA:3.20.20.60 1 260 3.3E-71 T 28-03-2018 RK98_RS06960 4baf6d11800a39f9dedebcdcd7419571 272 SUPERFAMILY SSF51621 3 260 1.1E-90 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 RK98_RS06960 4baf6d11800a39f9dedebcdcd7419571 272 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 260 37.87 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RK98_RS06960 4baf6d11800a39f9dedebcdcd7419571 272 PIRSF PIRSF000388 1 263 4.4E-96 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 RK98_RS07650 472124d158ca05237a4967375ddd8822 140 Pfam PF02627 Carboxymuconolactone decarboxylase family 28 91 5.2E-9 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RK98_RS07650 472124d158ca05237a4967375ddd8822 140 Gene3D G3DSA:1.20.1290.10 3 139 2.3E-22 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 RK98_RS07650 472124d158ca05237a4967375ddd8822 140 SUPERFAMILY SSF69118 4 138 5.95E-30 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 RK98_RS07650 472124d158ca05237a4967375ddd8822 140 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 35 72 4.5E-11 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 RK98_RS03110 842231a90fe6089436ee0271c24a0cb6 122 Pfam PF04241 Protein of unknown function (DUF423) 18 103 1.3E-31 T 28-03-2018 IPR006696 Protein of unknown function DUF423 RK98_RS02690 287d8797961ef0d79c17136d5239a61b 629 PIRSF PIRSF018968 1 629 1.3E-88 T 28-03-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 RK98_RS04890 5120c43b3d66303edcfa6f190aa749bc 458 Gene3D G3DSA:1.20.1250.20 257 458 8.1E-21 T 28-03-2018 RK98_RS04890 5120c43b3d66303edcfa6f190aa749bc 458 Pfam PF07690 Major Facilitator Superfamily 13 409 5.3E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS04890 5120c43b3d66303edcfa6f190aa749bc 458 Gene3D G3DSA:1.20.1250.20 6 197 1.9E-21 T 28-03-2018 RK98_RS04890 5120c43b3d66303edcfa6f190aa749bc 458 SUPERFAMILY SSF103473 7 197 6.28E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS04890 5120c43b3d66303edcfa6f190aa749bc 458 SUPERFAMILY SSF103473 247 456 6.28E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS12715 999adf2bbde91541a168731200b3ad53 260 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 218 244 - T 28-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 RK98_RS12715 999adf2bbde91541a168731200b3ad53 260 Pfam PF01148 Cytidylyltransferase family 2 257 7.4E-74 T 28-03-2018 RK98_RS06090 fc71d010fd1027374c7370728eea3164 312 SUPERFAMILY SSF56281 10 259 1.15E-48 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS06090 fc71d010fd1027374c7370728eea3164 312 SMART SM00849 12 195 9.2E-25 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS06090 fc71d010fd1027374c7370728eea3164 312 Gene3D G3DSA:3.60.15.10 1 262 2.9E-41 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS06090 fc71d010fd1027374c7370728eea3164 312 Pfam PF00753 Metallo-beta-lactamase superfamily 13 168 1.2E-8 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS06090 fc71d010fd1027374c7370728eea3164 312 Gene3D G3DSA:3.40.250.10 263 312 1.3E-4 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 Gene3D G3DSA:3.40.720.10 23 474 1.7E-123 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 ProSitePatterns PS00123 Alkaline phosphatase active site. 104 112 - T 28-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 PRINTS PR00113 Alkaline phosphatase signature 104 119 7.2E-42 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 PRINTS PR00113 Alkaline phosphatase signature 49 69 7.2E-42 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 PRINTS PR00113 Alkaline phosphatase signature 141 161 7.2E-42 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 PRINTS PR00113 Alkaline phosphatase signature 191 201 7.2E-42 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 PRINTS PR00113 Alkaline phosphatase signature 257 286 7.2E-42 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 SUPERFAMILY SSF53649 417 473 9.65E-126 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 SUPERFAMILY SSF53649 42 380 9.65E-126 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 SMART SM00098 50 474 4.6E-141 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RK98_RS06775 b6e729d2a90de0437490d73af4093905 474 Pfam PF00245 Alkaline phosphatase 50 472 3.0E-116 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 RK98_RS10790 3afb5a82cc713fd8b19115cd85ebc62c 607 Gene3D G3DSA:1.20.1480.30 147 429 2.1E-4 T 28-03-2018 RK98_RS10790 3afb5a82cc713fd8b19115cd85ebc62c 607 Pfam PF10651 Domain of unknown function (DUF2479) 11 160 2.1E-34 T 28-03-2018 IPR018913 Domain of unknown function DUF2479 RK98_RS01380 eda181b0c85802f14c2140574d494626 200 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 117 169 5.2E-9 T 28-03-2018 IPR019264 Domain of unknown function DUF2179 RK98_RS01380 eda181b0c85802f14c2140574d494626 200 Hamap MF_01515 UPF0316 protein . 9 177 31.906 T 28-03-2018 IPR022930 Protein of unknown function UPF0316 RK98_RS07670 5e792eac50454fbd7de98bc71331f23d 273 Gene3D G3DSA:3.10.310.10 203 273 0.0054 T 28-03-2018 RK98_RS07670 5e792eac50454fbd7de98bc71331f23d 273 SUPERFAMILY SSF54506 8 271 1.88E-9 T 28-03-2018 RK98_RS07670 5e792eac50454fbd7de98bc71331f23d 273 Gene3D G3DSA:3.10.310.10 5 141 5.9E-13 T 28-03-2018 RK98_RS11425 95db37c44e598acbb5e70a15ad5e7c2d 72 Pfam PF08858 IDEAL domain 27 63 8.5E-14 T 28-03-2018 IPR014957 IDEAL domain RK98_RS11425 95db37c44e598acbb5e70a15ad5e7c2d 72 SMART SM00914 27 63 1.2E-11 T 28-03-2018 IPR014957 IDEAL domain RK98_RS11365 86c8cf927fcda23c915843d3dc62c43b 402 Pfam PF07690 Major Facilitator Superfamily 25 359 3.0E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS11365 86c8cf927fcda23c915843d3dc62c43b 402 Gene3D G3DSA:1.20.1250.20 8 193 3.2E-17 T 28-03-2018 RK98_RS11365 86c8cf927fcda23c915843d3dc62c43b 402 Gene3D G3DSA:1.20.1250.20 213 402 2.1E-20 T 28-03-2018 RK98_RS11365 86c8cf927fcda23c915843d3dc62c43b 402 SUPERFAMILY SSF103473 17 395 2.62E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 1.8E-60 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 9.1E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 9.1E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 9.1E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 9.1E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 Gene3D G3DSA:3.90.1170.10 3 139 9.4E-53 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.941 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.5E-51 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RK98_RS08950 74ff392005ad3cf40c89671ab9095900 144 SUPERFAMILY SSF54686 1 137 9.42E-59 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 RK98_RS07235 24156d56e5a02461743983c688332772 173 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 69 7.3E-7 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RK98_RS07235 24156d56e5a02461743983c688332772 173 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 128 134 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RK98_RS07235 24156d56e5a02461743983c688332772 173 Gene3D G3DSA:3.30.160.70 1 68 1.5E-16 T 28-03-2018 RK98_RS07235 24156d56e5a02461743983c688332772 173 SUPERFAMILY SSF53155 3 77 1.1E-15 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 RK98_RS07235 24156d56e5a02461743983c688332772 173 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 158 35.811 T 28-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 RK98_RS07235 24156d56e5a02461743983c688332772 173 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 74 157 5.5E-27 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RK98_RS07235 24156d56e5a02461743983c688332772 173 Gene3D G3DSA:1.10.10.10 69 160 1.2E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07235 24156d56e5a02461743983c688332772 173 SUPERFAMILY SSF46767 72 159 3.4E-25 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RK98_RS07235 24156d56e5a02461743983c688332772 173 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 75 158 7.9E-30 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 RK98_RS06630 acb932700fe890890343f70256d3f441 2271 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 2229 2261 4.1E-5 T 28-03-2018 RK98_RS06630 acb932700fe890890343f70256d3f441 2271 SUPERFAMILY SSF49313 664 749 7.53E-9 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 RK98_RS06630 acb932700fe890890343f70256d3f441 2271 SUPERFAMILY SSF49313 581 662 1.24E-8 T 28-03-2018 IPR015919 Cadherin-like GO:0005509|GO:0016020 RK98_RS06630 acb932700fe890890343f70256d3f441 2271 TIGRFAM TIGR03715 KxYKxGKxW: KxYKxGKxW signal peptide 16 34 5.5E-7 T 28-03-2018 IPR022263 KxYKxGKxW signal peptide RK98_RS06630 acb932700fe890890343f70256d3f441 2271 Pfam PF00746 LPXTG cell wall anchor motif 2222 2262 5.4E-8 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS06630 acb932700fe890890343f70256d3f441 2271 SUPERFAMILY SSF49899 258 485 5.06E-21 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain RK98_RS06985 688a305f9d456e984026203001a9d84a 560 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 50 295 3.8E-40 T 28-03-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 RK98_RS06985 688a305f9d456e984026203001a9d84a 560 Gene3D G3DSA:2.60.120.260 347 559 3.3E-24 T 28-03-2018 IPR008979 Galactose-binding domain-like RK98_RS06985 688a305f9d456e984026203001a9d84a 560 Gene3D G3DSA:3.40.50.1820 14 346 3.0E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS06985 688a305f9d456e984026203001a9d84a 560 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 46 559 6.8E-74 T 28-03-2018 IPR005674 CocE/Serine esterase GO:0016787 RK98_RS06985 688a305f9d456e984026203001a9d84a 560 SMART SM00939 313 555 4.5E-40 T 28-03-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 RK98_RS06985 688a305f9d456e984026203001a9d84a 560 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 325 555 6.6E-47 T 28-03-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 RK98_RS06985 688a305f9d456e984026203001a9d84a 560 SUPERFAMILY SSF49785 344 560 4.25E-34 T 28-03-2018 IPR008979 Galactose-binding domain-like RK98_RS06985 688a305f9d456e984026203001a9d84a 560 SUPERFAMILY SSF53474 27 339 6.41E-68 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS00150 9738e9f8fdabecaf03670c19429dbfb6 247 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 15 243 3.7E-42 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RK98_RS00150 9738e9f8fdabecaf03670c19429dbfb6 247 SUPERFAMILY SSF51695 10 246 6.54E-67 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS00150 9738e9f8fdabecaf03670c19429dbfb6 247 Gene3D G3DSA:3.20.20.190 1 247 1.4E-66 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 SUPERFAMILY SSF81338 3 235 4.32E-70 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 9.5E-59 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 Pfam PF00230 Major intrinsic protein 4 230 6.0E-45 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 ProSitePatterns PS00221 MIP family signature. 62 70 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.4E-44 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 PRINTS PR00783 Major intrinsic protein family signature 136 154 1.4E-44 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 PRINTS PR00783 Major intrinsic protein family signature 213 233 1.4E-44 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 PRINTS PR00783 Major intrinsic protein family signature 44 68 1.4E-44 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 PRINTS PR00783 Major intrinsic protein family signature 81 100 1.4E-44 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 PRINTS PR00783 Major intrinsic protein family signature 166 188 1.4E-44 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 RK98_RS12910 d485f636dd3d76c5a5af74a5dbd09371 272 Gene3D G3DSA:1.20.1080.10 1 240 4.4E-81 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RK98_RS06480 d47362588fdad52939dec65e1afa7055 277 Pfam PF02361 Cobalt transport protein 13 235 1.2E-30 T 28-03-2018 IPR003339 ABC/ECF transporter, transmembrane component RK98_RS11020 4a6e1cb292a52704593d8e39eb5a1c16 384 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 351 5.2E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11020 4a6e1cb292a52704593d8e39eb5a1c16 384 Gene3D G3DSA:3.50.50.60 1 181 6.8E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11020 4a6e1cb292a52704593d8e39eb5a1c16 384 Gene3D G3DSA:3.50.50.60 182 379 1.9E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11020 4a6e1cb292a52704593d8e39eb5a1c16 384 SUPERFAMILY SSF51905 3 224 5.18E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS11020 4a6e1cb292a52704593d8e39eb5a1c16 384 SUPERFAMILY SSF51905 182 355 3.02E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS10250 fba47dad6249ae844153ee82794733d2 322 Pfam PF07751 Abi-like protein 29 231 3.4E-43 T 28-03-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like RK98_RS10250 fba47dad6249ae844153ee82794733d2 322 PIRSF PIRSF034934 1 322 1.2E-84 T 28-03-2018 IPR017034 Abortive infection system protein AbiD/AbiF RK98_RS02620 93fe2d81c167e8c0c733f2dc0a71a894 229 Pfam PF06570 Protein of unknown function (DUF1129) 39 206 3.3E-8 T 28-03-2018 IPR009214 Protein of unknown function DUF1129 RK98_RS02620 93fe2d81c167e8c0c733f2dc0a71a894 229 Gene3D G3DSA:1.10.1900.10 14 95 1.0E-10 T 28-03-2018 RK98_RS02620 93fe2d81c167e8c0c733f2dc0a71a894 229 SUPERFAMILY SSF158560 5 98 1.83E-7 T 28-03-2018 RK98_RS05495 57103ad83dfbcb2367f7acc478075894 401 Pfam PF00534 Glycosyl transferases group 1 221 379 9.3E-9 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 RK98_RS05495 57103ad83dfbcb2367f7acc478075894 401 Gene3D G3DSA:3.40.50.2000 19 211 9.7E-5 T 28-03-2018 RK98_RS05495 57103ad83dfbcb2367f7acc478075894 401 SUPERFAMILY SSF53756 5 400 3.63E-28 T 28-03-2018 RK98_RS05495 57103ad83dfbcb2367f7acc478075894 401 Gene3D G3DSA:3.40.50.2000 212 388 3.3E-14 T 28-03-2018 RK98_RS03005 632a2a0bdc736fa19464cd9b4959cda7 178 SUPERFAMILY SSF52218 2 173 3.73E-33 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS03005 632a2a0bdc736fa19464cd9b4959cda7 178 Pfam PF03358 NADPH-dependent FMN reductase 2 99 6.3E-17 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RK98_RS03005 632a2a0bdc736fa19464cd9b4959cda7 178 Gene3D G3DSA:3.40.50.360 1 174 1.1E-27 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS13505 69e9314701f523420917a0d0f30392c8 102 Pfam PF06279 Protein of unknown function (DUF1033) 1 93 9.7E-18 T 28-03-2018 IPR010434 Protein of unknown function DUF1033 RK98_RS00800 372ce52a3d42de497dd9c6fb968ed90d 407 Pfam PF05975 Bacterial ABC transporter protein EcsB 7 386 1.2E-104 T 28-03-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 RK98_RS00800 372ce52a3d42de497dd9c6fb968ed90d 407 PIRSF PIRSF037259 3 407 1.6E-121 T 28-03-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 RK98_RS06470 217d7d6f10fdb68b21b95429d2d83364 184 Hamap MF_01572 UPF0397 protein . 4 184 28.39 T 28-03-2018 IPR022914 Protein of unknown function UPF0397 RK98_RS06470 217d7d6f10fdb68b21b95429d2d83364 184 Pfam PF07155 ECF-type riboflavin transporter, S component 6 172 8.6E-51 T 28-03-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 RK98_RS00480 8e37995d6623169a397b28f0f20aa278 117 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 116 16.753 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RK98_RS00480 8e37995d6623169a397b28f0f20aa278 117 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 114 3.2E-21 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RK98_RS12595 95bf08ea2e6f7d8d5dfe76d79e72daf8 167 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 3 165 1.5E-48 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RK98_RS12595 95bf08ea2e6f7d8d5dfe76d79e72daf8 167 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 2 165 25.163 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 RK98_RS12595 95bf08ea2e6f7d8d5dfe76d79e72daf8 167 SUPERFAMILY SSF50346 97 165 3.92E-21 T 28-03-2018 IPR011033 PRC-barrel-like RK98_RS12595 95bf08ea2e6f7d8d5dfe76d79e72daf8 167 Pfam PF01782 RimM N-terminal domain 4 86 6.3E-24 T 28-03-2018 IPR002676 RimM protein GO:0006364 RK98_RS12595 95bf08ea2e6f7d8d5dfe76d79e72daf8 167 Gene3D G3DSA:2.40.30.60 1 89 6.1E-23 T 28-03-2018 IPR002676 RimM protein GO:0006364 RK98_RS12595 95bf08ea2e6f7d8d5dfe76d79e72daf8 167 Gene3D G3DSA:2.30.30.240 93 160 2.8E-23 T 28-03-2018 RK98_RS12595 95bf08ea2e6f7d8d5dfe76d79e72daf8 167 SUPERFAMILY SSF50447 3 86 5.3E-21 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS12595 95bf08ea2e6f7d8d5dfe76d79e72daf8 167 Pfam PF05239 PRC-barrel domain 94 166 8.2E-14 T 28-03-2018 IPR027275 PRC-barrel domain RK98_RS08685 466c7d900f5e860d7a48dce05b6a2d14 229 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 229 27.23 T 28-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RK98_RS08685 466c7d900f5e860d7a48dce05b6a2d14 229 Pfam PF01730 UreF 37 186 1.7E-30 T 28-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RK98_RS08685 466c7d900f5e860d7a48dce05b6a2d14 229 PIRSF PIRSF009467 3 229 9.9E-80 T 28-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 RK98_RS13680 36e6bf17949c55df2cd6fb7b6e6ad299 440 PIRSF PIRSF006060 1 440 7.3E-84 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS13680 36e6bf17949c55df2cd6fb7b6e6ad299 440 Pfam PF13520 Amino acid permease 11 409 1.0E-59 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS01390 e84c4d303b02a1160089b6b3a5d36db9 489 PIRSF PIRSF000484 3 480 1.4E-151 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 RK98_RS01390 e84c4d303b02a1160089b6b3a5d36db9 489 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 154 336 2.0E-10 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 RK98_RS01390 e84c4d303b02a1160089b6b3a5d36db9 489 SUPERFAMILY SSF51690 139 478 3.24E-130 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 RK98_RS01390 e84c4d303b02a1160089b6b3a5d36db9 489 SUPERFAMILY SSF54675 6 138 8.05E-46 T 28-03-2018 RK98_RS01390 e84c4d303b02a1160089b6b3a5d36db9 489 Gene3D G3DSA:3.20.140.10 6 388 2.7E-126 T 28-03-2018 RK98_RS01390 e84c4d303b02a1160089b6b3a5d36db9 489 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 11 464 1.1E-179 T 28-03-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 RK98_RS08025 ee9519d43768d6330098bbb8e5a88441 239 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 128 2.0E-24 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 RK98_RS08025 ee9519d43768d6330098bbb8e5a88441 239 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 231 2.0E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS08025 ee9519d43768d6330098bbb8e5a88441 239 Gene3D G3DSA:1.10.3720.10 4 239 2.4E-40 T 28-03-2018 RK98_RS08025 ee9519d43768d6330098bbb8e5a88441 239 SUPERFAMILY SSF161098 25 219 2.62E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS08135 471e635c8c8fa3bfdfc72abc6cd3c7b3 150 Gene3D G3DSA:3.30.450.40 10 141 3.0E-14 T 28-03-2018 IPR029016 GAF domain-like RK98_RS08135 471e635c8c8fa3bfdfc72abc6cd3c7b3 150 Pfam PF13185 GAF domain 12 138 2.7E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 RK98_RS08135 471e635c8c8fa3bfdfc72abc6cd3c7b3 150 SUPERFAMILY SSF55781 9 139 1.09E-12 T 28-03-2018 IPR029016 GAF domain-like RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 Pfam PF07517 SecA DEAD-like domain 7 388 7.6E-119 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 SUPERFAMILY SSF52540 403 575 7.38E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 SMART SM00958 232 344 2.2E-66 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 Gene3D G3DSA:3.10.450.50 688 843 3.7E-42 T 28-03-2018 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 SUPERFAMILY SSF81767 231 354 6.8E-48 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 Pfam PF01043 SecA preprotein cross-linking domain 236 344 1.2E-40 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 SMART SM00957 4 388 2.6E-261 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 Gene3D G3DSA:3.40.50.300 289 402 7.0E-9 T 28-03-2018 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 Gene3D G3DSA:3.40.50.300 7 274 6.9E-49 T 28-03-2018 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 784 19.094 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 Pfam PF07516 SecA Wing and Scaffold domain 574 780 3.9E-57 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 Gene3D G3DSA:1.10.3060.10 591 687 1.1E-25 T 28-03-2018 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 PRINTS PR00906 SecA protein signature 399 412 2.8E-69 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 PRINTS PR00906 SecA protein signature 174 194 2.8E-69 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 PRINTS PR00906 SecA protein signature 121 131 2.8E-69 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 PRINTS PR00906 SecA protein signature 105 119 2.8E-69 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 PRINTS PR00906 SecA protein signature 362 379 2.8E-69 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 PRINTS PR00906 SecA protein signature 67 91 2.8E-69 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 PRINTS PR00906 SecA protein signature 325 347 2.8E-69 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 Gene3D G3DSA:3.40.50.300 403 590 4.2E-54 T 28-03-2018 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 SUPERFAMILY SSF52540 10 232 1.19E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 SUPERFAMILY SSF52540 354 401 1.19E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 ProSitePatterns PS01312 SecA family signature. 486 501 - T 28-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 25 503 2.8E-241 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 Pfam PF02810 SEC-C motif 825 843 1.2E-8 T 28-03-2018 IPR004027 SEC-C motif RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 SUPERFAMILY SSF81886 577 792 3.66E-71 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RK98_RS02200 6557243f96eeab68487a0fe7f743885d 843 SUPERFAMILY SSF81886 821 833 3.66E-71 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 RK98_RS11640 2995f35866eda3081f965c77cbd1e66d 374 Gene3D G3DSA:3.40.50.20 10 95 3.7E-27 T 28-03-2018 RK98_RS11640 2995f35866eda3081f965c77cbd1e66d 374 SUPERFAMILY SSF56059 107 302 5.48E-56 T 28-03-2018 RK98_RS11640 2995f35866eda3081f965c77cbd1e66d 374 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 11 364 8.1E-115 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RK98_RS11640 2995f35866eda3081f965c77cbd1e66d 374 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 9 76 4.0E-6 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 RK98_RS11640 2995f35866eda3081f965c77cbd1e66d 374 SUPERFAMILY SSF52440 10 102 1.44E-27 T 28-03-2018 IPR016185 Pre-ATP-grasp domain RK98_RS11640 2995f35866eda3081f965c77cbd1e66d 374 Gene3D G3DSA:3.30.470.20 187 371 2.4E-32 T 28-03-2018 RK98_RS11640 2995f35866eda3081f965c77cbd1e66d 374 Gene3D G3DSA:3.30.1490.20 98 186 3.2E-15 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RK98_RS11640 2995f35866eda3081f965c77cbd1e66d 374 Pfam PF02222 ATP-grasp domain 116 283 3.1E-47 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type RK98_RS11640 2995f35866eda3081f965c77cbd1e66d 374 SUPERFAMILY SSF51246 308 367 1.65E-15 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 RK98_RS11640 2995f35866eda3081f965c77cbd1e66d 374 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 11 359 40.073 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 RK98_RS12765 08c210b8f88c03fe1d00b62fad6176a3 116 ProSitePatterns PS01319 Ribosome-binding factor A signature. 74 95 - T 28-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 RK98_RS12765 08c210b8f88c03fe1d00b62fad6176a3 116 SUPERFAMILY SSF89919 1 111 3.01E-35 T 28-03-2018 IPR023799 Ribosome-binding factor A domain RK98_RS12765 08c210b8f88c03fe1d00b62fad6176a3 116 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 113 2.5E-37 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 RK98_RS12765 08c210b8f88c03fe1d00b62fad6176a3 116 Gene3D G3DSA:3.30.300.20 3 115 1.4E-34 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta RK98_RS12765 08c210b8f88c03fe1d00b62fad6176a3 116 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 115 24.141 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 RK98_RS12765 08c210b8f88c03fe1d00b62fad6176a3 116 Pfam PF02033 Ribosome-binding factor A 5 108 2.3E-32 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 RK98_RS12765 08c210b8f88c03fe1d00b62fad6176a3 116 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 95 5.0E-46 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 Gene3D G3DSA:3.90.780.10 304 510 3.9E-41 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 PRINTS PR01607 Apyrase family signature 181 198 5.5E-20 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 PRINTS PR01607 Apyrase family signature 217 240 5.5E-20 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 PRINTS PR01607 Apyrase family signature 2 20 5.5E-20 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 PRINTS PR01607 Apyrase family signature 243 263 5.5E-20 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 PRINTS PR01607 Apyrase family signature 358 381 5.5E-20 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 PRINTS PR01607 Apyrase family signature 447 466 5.5E-20 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 Gene3D G3DSA:3.60.21.10 2 303 8.5E-64 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS05570 9fc679542d3158a991689765a92a1145 511 Pfam PF02872 5'-nucleotidase, C-terminal domain 312 472 2.5E-28 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 SUPERFAMILY SSF55816 304 501 3.53E-42 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 ProSitePatterns PS00786 5'-nucleotidase signature 2. 86 97 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 Pfam PF00149 Calcineurin-like phosphoesterase 6 234 2.4E-6 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 RK98_RS05570 9fc679542d3158a991689765a92a1145 511 SUPERFAMILY SSF56300 3 300 1.36E-64 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS04550 4ac02df0a168621c8c801edc000b612b 308 Gene3D G3DSA:3.10.180.10 150 308 2.1E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS04550 4ac02df0a168621c8c801edc000b612b 308 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 123 1.3E-10 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK98_RS04550 4ac02df0a168621c8c801edc000b612b 308 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 155 274 7.9E-7 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK98_RS04550 4ac02df0a168621c8c801edc000b612b 308 Gene3D G3DSA:3.10.180.10 1 136 1.1E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS04550 4ac02df0a168621c8c801edc000b612b 308 SUPERFAMILY SSF54593 1 287 3.39E-43 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS04630 304d9538f0f8c22dbf2abcf1fe5c5c86 333 Gene3D G3DSA:3.20.20.30 2 331 1.5E-59 T 28-03-2018 RK98_RS04630 304d9538f0f8c22dbf2abcf1fe5c5c86 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 330 6.4E-105 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 RK98_RS04630 304d9538f0f8c22dbf2abcf1fe5c5c86 333 SUPERFAMILY SSF51679 3 330 6.67E-63 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RK98_RS04630 304d9538f0f8c22dbf2abcf1fe5c5c86 333 Pfam PF00296 Luciferase-like monooxygenase 19 302 7.5E-31 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 SUPERFAMILY SSF52518 16 180 3.53E-32 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 Gene3D G3DSA:3.40.50.970 4 204 1.4E-48 T 28-03-2018 RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 Gene3D G3DSA:3.40.50.970 353 550 3.5E-19 T 28-03-2018 RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 13 428 2.0E-128 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 5 549 33.256 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 SUPERFAMILY SSF52518 371 553 8.84E-21 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 PIRSF PIRSF004983 2 556 1.7E-180 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 Gene3D G3DSA:3.40.50.1220 205 352 2.6E-17 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 175 1.1E-31 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 420 511 6.4E-5 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RK98_RS11525 de38c95af65d847bf3942736d65d6912 557 Pfam PF16582 Middle domain of thiamine pyrophosphate 209 387 6.3E-12 T 28-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 RK98_RS12700 01fb407a6c6f6f980c164042e5e0aef4 240 Gene3D G3DSA:3.40.1160.10 1 240 4.3E-42 T 28-03-2018 RK98_RS12700 01fb407a6c6f6f980c164042e5e0aef4 240 PIRSF PIRSF005650 2 240 6.7E-94 T 28-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 RK98_RS12700 01fb407a6c6f6f980c164042e5e0aef4 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 7 239 3.2E-104 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 RK98_RS12700 01fb407a6c6f6f980c164042e5e0aef4 240 Pfam PF00696 Amino acid kinase family 8 218 2.5E-27 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS12700 01fb407a6c6f6f980c164042e5e0aef4 240 SUPERFAMILY SSF53633 6 239 1.83E-73 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS12700 01fb407a6c6f6f980c164042e5e0aef4 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 5 239 43.413 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 RK98_RS13135 f12a89ed728ecd1a13c471bf80d1c4ea 325 Hamap MF_01511 GMP reductase [guaC]. 1 324 64.413 T 28-03-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 RK98_RS13135 f12a89ed728ecd1a13c471bf80d1c4ea 325 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 3 323 1.4E-211 T 28-03-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 RK98_RS13135 f12a89ed728ecd1a13c471bf80d1c4ea 325 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 164 176 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 RK98_RS13135 f12a89ed728ecd1a13c471bf80d1c4ea 325 Gene3D G3DSA:3.20.20.70 2 324 2.2E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS13135 f12a89ed728ecd1a13c471bf80d1c4ea 325 PIRSF PIRSF036500 1 325 1.4E-197 T 28-03-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 RK98_RS13135 f12a89ed728ecd1a13c471bf80d1c4ea 325 SUPERFAMILY SSF51412 3 314 3.92E-91 T 28-03-2018 RK98_RS13135 f12a89ed728ecd1a13c471bf80d1c4ea 325 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 5 310 2.1E-67 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 RK98_RS13135 f12a89ed728ecd1a13c471bf80d1c4ea 325 SMART SM01240 2 325 9.1E-111 T 28-03-2018 RK98_RS05735 28997573dfbe7f0037ae1ce5c2d5044d 331 Gene3D G3DSA:1.10.3470.10 4 331 2.7E-58 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS05735 28997573dfbe7f0037ae1ce5c2d5044d 331 SUPERFAMILY SSF81345 6 326 2.62E-73 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS05735 28997573dfbe7f0037ae1ce5c2d5044d 331 Pfam PF01032 FecCD transport family 16 326 5.8E-89 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RK98_RS05560 b1767bfc1428d12c3f3c728a051dbd15 391 SUPERFAMILY SSF47413 1 66 1.89E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS05560 b1767bfc1428d12c3f3c728a051dbd15 391 Pfam PF01381 Helix-turn-helix 7 61 5.1E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS05560 b1767bfc1428d12c3f3c728a051dbd15 391 Pfam PF06114 IrrE N-terminal-like domain 170 293 2.1E-18 T 28-03-2018 IPR010359 IrrE N-terminal-like domain RK98_RS05560 b1767bfc1428d12c3f3c728a051dbd15 391 SMART SM00530 6 61 3.2E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS05560 b1767bfc1428d12c3f3c728a051dbd15 391 Gene3D G3DSA:1.10.260.40 2 182 1.9E-11 T 28-03-2018 RK98_RS01160 f5e822cbc9c1ecdb0525b75843814b4e 269 Gene3D G3DSA:1.10.3810.10 63 268 1.0E-63 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 RK98_RS01160 f5e822cbc9c1ecdb0525b75843814b4e 269 SUPERFAMILY SSF53955 76 265 3.37E-57 T 28-03-2018 IPR023346 Lysozyme-like domain RK98_RS01160 f5e822cbc9c1ecdb0525b75843814b4e 269 Pfam PF00912 Transglycosylase 75 250 4.0E-55 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 RK98_RS01160 f5e822cbc9c1ecdb0525b75843814b4e 269 Hamap MF_01434 Monofunctional glycosyltransferase [mgt]. 1 269 53.111 T 28-03-2018 IPR022978 Monofunctional glycosyl transferase GO:0016757 RK98_RS14670 f6990fbc6b0ba7b4b6fa5b599f26bc25 140 Pfam PF02082 Transcriptional regulator 1 82 9.3E-27 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type RK98_RS14670 f6990fbc6b0ba7b4b6fa5b599f26bc25 140 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 124 5.8E-32 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type RK98_RS14670 f6990fbc6b0ba7b4b6fa5b599f26bc25 140 Gene3D G3DSA:1.10.10.10 1 140 9.2E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14670 f6990fbc6b0ba7b4b6fa5b599f26bc25 140 SUPERFAMILY SSF46785 2 126 6.28E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14670 f6990fbc6b0ba7b4b6fa5b599f26bc25 140 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site RK98_RS10195 3823f021de721ac75d10ff18fb42d9ad 289 Pfam PF08708 Primase C terminal 1 (PriCT-1) 227 287 1.4E-9 T 28-03-2018 IPR014820 Primase, C-terminal 1 RK98_RS10195 3823f021de721ac75d10ff18fb42d9ad 289 SMART SM00942 223 288 1.1E-21 T 28-03-2018 IPR014820 Primase, C-terminal 1 RK98_RS05300 970154153c98fa52f826149b7ef5b7e7 392 Gene3D G3DSA:1.20.1250.20 7 384 0.0069 T 28-03-2018 RK98_RS05300 970154153c98fa52f826149b7ef5b7e7 392 Pfam PF12704 MacB-like periplasmic core domain 23 232 5.7E-23 T 28-03-2018 IPR025857 MacB-like periplasmic core domain RK98_RS05300 970154153c98fa52f826149b7ef5b7e7 392 Pfam PF02687 FtsX-like permease family 298 386 1.2E-13 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RK98_RS09570 79603ffafb48c35e95b02c81cc69c689 267 SUPERFAMILY SSF53067 1 265 1.4E-62 T 28-03-2018 RK98_RS09570 79603ffafb48c35e95b02c81cc69c689 267 TIGRFAM TIGR00555 panK_eukar: pantothenate kinase 1 264 5.0E-94 T 28-03-2018 IPR004567 Type II pantothenate kinase GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|Reactome: R-HSA-196783 RK98_RS09570 79603ffafb48c35e95b02c81cc69c689 267 Gene3D G3DSA:3.30.420.40 1 132 0.002 T 28-03-2018 RK98_RS09570 79603ffafb48c35e95b02c81cc69c689 267 PIRSF PIRSF036940 1 267 5.2E-140 T 28-03-2018 IPR011602 Type II pantothenate kinase, bacterial GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RK98_RS09570 79603ffafb48c35e95b02c81cc69c689 267 Hamap MF_01273 Type II pantothenate kinase [coaW]. 1 265 53.631 T 28-03-2018 IPR011602 Type II pantothenate kinase, bacterial GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 RK98_RS09570 79603ffafb48c35e95b02c81cc69c689 267 Pfam PF03630 Fumble 80 263 3.5E-22 T 28-03-2018 IPR004567 Type II pantothenate kinase GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|Reactome: R-HSA-196783 RK98_RS06290 7278e8e104a642ce13c857c854756987 504 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 499 3.0E-200 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS06290 7278e8e104a642ce13c857c854756987 504 SUPERFAMILY SSF48557 2 498 4.16E-184 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 RK98_RS06290 7278e8e104a642ce13c857c854756987 504 Gene3D G3DSA:1.20.200.10 198 504 7.9E-115 T 28-03-2018 RK98_RS06290 7278e8e104a642ce13c857c854756987 504 Gene3D G3DSA:1.10.275.10 1 196 1.6E-70 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal RK98_RS06290 7278e8e104a642ce13c857c854756987 504 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 504 45.129 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS06290 7278e8e104a642ce13c857c854756987 504 Pfam PF00221 Aromatic amino acid lyase 10 471 9.4E-184 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 RK98_RS06290 7278e8e104a642ce13c857c854756987 504 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 28-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 RK98_RS05020 15f6184a6860e3095a8b7c2c4676e180 238 Gene3D G3DSA:3.90.550.10 1 237 2.3E-44 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS05020 15f6184a6860e3095a8b7c2c4676e180 238 SUPERFAMILY SSF53448 1 232 5.84E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS05020 15f6184a6860e3095a8b7c2c4676e180 238 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 107 114 - T 28-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RK98_RS05020 15f6184a6860e3095a8b7c2c4676e180 238 Hamap MF_02068 Ribitol-5-phosphate cytidylyltransferase [tarI]. 1 234 45.082 T 28-03-2018 IPR034709 Ribitol-5-phosphate cytidylyltransferase GO:0047349 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RK98_RS05020 15f6184a6860e3095a8b7c2c4676e180 238 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 232 3.4E-43 T 28-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 RK98_RS07435 d30a4a1e0ef88f1d39445318ff5a689f 425 Pfam PF07690 Major Facilitator Superfamily 16 376 2.2E-59 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS07435 d30a4a1e0ef88f1d39445318ff5a689f 425 Gene3D G3DSA:1.20.1250.20 214 421 6.4E-25 T 28-03-2018 RK98_RS07435 d30a4a1e0ef88f1d39445318ff5a689f 425 PIRSF PIRSF002808 1 418 1.2E-35 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 RK98_RS07435 d30a4a1e0ef88f1d39445318ff5a689f 425 SUPERFAMILY SSF103473 4 412 1.07E-79 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS07435 d30a4a1e0ef88f1d39445318ff5a689f 425 Gene3D G3DSA:1.20.1250.20 1 204 2.5E-41 T 28-03-2018 RK98_RS11580 4e5af17405bc93fa4217e36504d34852 144 SUPERFAMILY SSF55729 6 141 1.36E-39 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS11580 4e5af17405bc93fa4217e36504d34852 144 Gene3D G3DSA:3.40.630.30 3 143 3.4E-36 T 28-03-2018 RK98_RS11580 4e5af17405bc93fa4217e36504d34852 144 Pfam PF13673 Acetyltransferase (GNAT) domain 20 140 9.4E-23 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS03045 089cdce4e87361ba1bf5266f689ea13c 146 SUPERFAMILY SSF46785 2 137 7.26E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03045 089cdce4e87361ba1bf5266f689ea13c 146 Pfam PF02082 Transcriptional regulator 3 78 1.6E-14 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type RK98_RS03045 089cdce4e87361ba1bf5266f689ea13c 146 Gene3D G3DSA:1.10.10.10 1 144 3.9E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 8 306 5.3E-98 T 28-03-2018 RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 Gene3D G3DSA:3.50.50.60 166 368 5.9E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 Gene3D G3DSA:3.50.50.60 1 162 1.4E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 SUPERFAMILY SSF51905 1 204 4.75E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 SUPERFAMILY SSF51905 167 309 2.05E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.4E-5 T 28-03-2018 RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 1.4E-5 T 28-03-2018 RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 287 309 1.4E-5 T 28-03-2018 RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 3.9E-7 T 28-03-2018 RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.9E-7 T 28-03-2018 RK98_RS07045 94dc5069eda5b661519f938aba9e1cff 368 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 134 143 3.9E-7 T 28-03-2018 RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 SUPERFAMILY SSF117074 589 688 8.11E-23 T 28-03-2018 RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 Pfam PF04650 YSIRK type signal peptide 16 41 4.2E-12 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 SUPERFAMILY SSF117074 485 586 4.45E-23 T 28-03-2018 RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 Gene3D G3DSA:2.60.40.1290 346 484 7.2E-34 T 28-03-2018 RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 337 484 5.5E-28 T 28-03-2018 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 Pfam PF17210 SdrD B-like domain 498 601 2.2E-34 T 28-03-2018 IPR033764 SD-repeat containing protein, B domain RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 Pfam PF17210 SdrD B-like domain 609 711 3.4E-28 T 28-03-2018 IPR033764 SD-repeat containing protein, B domain RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 Gene3D G3DSA:2.60.40.10 607 725 2.4E-25 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 Gene3D G3DSA:2.60.40.10 494 606 1.5E-26 T 28-03-2018 IPR013783 Immunoglobulin-like fold RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 SUPERFAMILY SSF49401 341 519 3.11E-31 T 28-03-2018 IPR008966 Adhesion domain RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 SUPERFAMILY SSF49401 182 335 2.11E-33 T 28-03-2018 IPR008966 Adhesion domain RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 11 52 2.5E-14 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 916 950 6.0E-4 T 28-03-2018 RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 Pfam PF00746 LPXTG cell wall anchor motif 909 953 3.9E-12 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS03220 39eebf140a4551c8ca7d405a8f03d82c 953 Gene3D G3DSA:2.60.40.1280 182 345 3.6E-33 T 28-03-2018 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.2E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 8.4E-73 T 28-03-2018 RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 5 243 2.2E-109 T 28-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 Gene3D G3DSA:3.40.50.720 36 244 5.6E-74 T 28-03-2018 RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 Gene3D G3DSA:3.40.50.720 1 35 2.4E-7 T 28-03-2018 RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 183 1.5E-6 T 28-03-2018 RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 SUPERFAMILY SSF51735 3 244 1.87E-93 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.8E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.8E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.8E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.8E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 6.8E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12550 4f3942ab9286babf8b5dc6bebdb5a14b 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 6.8E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS04980 cb0fd269547523c1db252b24e6247970 224 Gene3D G3DSA:1.10.3910.10 1 62 2.1E-16 T 28-03-2018 RK98_RS04980 cb0fd269547523c1db252b24e6247970 224 Gene3D G3DSA:1.20.120.520 63 224 1.3E-20 T 28-03-2018 RK98_RS04980 cb0fd269547523c1db252b24e6247970 224 Pfam PF04405 Domain of Unknown function (DUF542) 5 59 1.2E-20 T 28-03-2018 IPR019903 Repair of iron centres family RK98_RS04980 cb0fd269547523c1db252b24e6247970 224 Pfam PF01814 Hemerythrin HHE cation binding domain 83 222 2.1E-18 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 RK98_RS04980 cb0fd269547523c1db252b24e6247970 224 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 223 2.0E-76 T 28-03-2018 IPR019903 Repair of iron centres family RK98_RS04980 cb0fd269547523c1db252b24e6247970 224 SUPERFAMILY SSF140683 1 61 3.4E-5 T 28-03-2018 RK98_RS04980 cb0fd269547523c1db252b24e6247970 224 Hamap MF_01156 Iron-sulfur cluster repair protein ScdA [scdA]. 1 224 52.344 T 28-03-2018 IPR023551 Iron-sulfur cluster repair protein ScdA GO:0006979 RK98_RS02990 c9acd6645e226b23d79936b917c6187c 173 Pfam PF08741 YwhD family 9 171 1.7E-77 T 28-03-2018 IPR014852 Uncharacterised protein YwhD RK98_RS01900 405c8a0a910f80e88ac8d1f6426fc4ce 435 Pfam PF02386 Cation transport protein 32 418 3.3E-52 T 28-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 RK98_RS13855 634bf851b398e4d1810c2dbd6a77de9c 241 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 141 155 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 RK98_RS13855 634bf851b398e4d1810c2dbd6a77de9c 241 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 2 233 38.137 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RK98_RS13855 634bf851b398e4d1810c2dbd6a77de9c 241 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 22 37 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 RK98_RS13855 634bf851b398e4d1810c2dbd6a77de9c 241 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 11 233 1.2E-90 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RK98_RS13855 634bf851b398e4d1810c2dbd6a77de9c 241 Pfam PF01209 ubiE/COQ5 methyltransferase family 5 233 7.8E-97 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 RK98_RS13855 634bf851b398e4d1810c2dbd6a77de9c 241 Gene3D G3DSA:3.40.50.150 1 237 9.2E-49 T 28-03-2018 RK98_RS13855 634bf851b398e4d1810c2dbd6a77de9c 241 SUPERFAMILY SSF53335 4 233 5.11E-54 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS07600 85016b999872108d1efe5907e1f85cb8 264 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 254 5.2E-104 T 28-03-2018 IPR007595 Csa1 family RK98_RS07600 85016b999872108d1efe5907e1f85cb8 264 Pfam PF04507 Csa1 family 1 257 7.8E-127 T 28-03-2018 IPR007595 Csa1 family RK98_RS14385 bbb4a6b6d8584b657ac5d8dc2fe84342 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 151 2.0E-42 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RK98_RS14385 bbb4a6b6d8584b657ac5d8dc2fe84342 155 SUPERFAMILY SSF55486 2 154 9.52E-46 T 28-03-2018 RK98_RS14385 bbb4a6b6d8584b657ac5d8dc2fe84342 155 Gene3D G3DSA:3.40.390.30 2 155 2.5E-50 T 28-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 RK98_RS14385 bbb4a6b6d8584b657ac5d8dc2fe84342 155 Pfam PF02130 Uncharacterized protein family UPF0054 16 149 1.6E-47 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RK98_RS14385 bbb4a6b6d8584b657ac5d8dc2fe84342 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 154 24.107 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 RK98_RS14385 bbb4a6b6d8584b657ac5d8dc2fe84342 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 120 130 - T 28-03-2018 IPR020549 Endoribonuclease YbeY, conserved site RK98_RS02435 5ec15343de9ad5e6ff2aceab74dde969 222 Pfam PF06508 Queuosine biosynthesis protein QueC 9 215 2.4E-87 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RK98_RS02435 5ec15343de9ad5e6ff2aceab74dde969 222 PIRSF PIRSF006293 6 221 3.6E-80 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RK98_RS02435 5ec15343de9ad5e6ff2aceab74dde969 222 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 10 208 5.4E-84 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RK98_RS02435 5ec15343de9ad5e6ff2aceab74dde969 222 SUPERFAMILY SSF52402 7 214 1.83E-68 T 28-03-2018 RK98_RS02435 5ec15343de9ad5e6ff2aceab74dde969 222 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 221 51.101 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 RK98_RS02435 5ec15343de9ad5e6ff2aceab74dde969 222 Gene3D G3DSA:3.40.50.620 6 221 5.3E-55 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS03765 3ffbdc001d064b9306e0c2d508927214 174 Pfam PF13527 Acetyltransferase (GNAT) domain 7 134 5.5E-10 T 28-03-2018 RK98_RS03765 3ffbdc001d064b9306e0c2d508927214 174 SUPERFAMILY SSF55729 6 141 4.56E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS03765 3ffbdc001d064b9306e0c2d508927214 174 Gene3D G3DSA:3.40.630.30 2 171 1.0E-14 T 28-03-2018 RK98_RS03445 9fd7d226c16957470b8390f27b43453c 186 SUPERFAMILY SSF52317 2 182 1.31E-46 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS03445 9fd7d226c16957470b8390f27b43453c 186 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 3 181 35.281 T 28-03-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RK98_RS03445 9fd7d226c16957470b8390f27b43453c 186 ProSitePatterns PS01236 PdxT/SNO family family signature. 40 50 - T 28-03-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RK98_RS03445 9fd7d226c16957470b8390f27b43453c 186 Gene3D G3DSA:3.40.50.880 1 186 1.3E-34 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS03445 9fd7d226c16957470b8390f27b43453c 186 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 2 180 4.6E-81 T 28-03-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RK98_RS03445 9fd7d226c16957470b8390f27b43453c 186 PIRSF PIRSF005639 1 186 6.9E-68 T 28-03-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RK98_RS03445 9fd7d226c16957470b8390f27b43453c 186 Pfam PF01174 SNO glutamine amidotransferase family 5 184 1.3E-68 T 28-03-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RK98_RS13470 03cbacd4fe4aee8b9bdfd52ba87d4aac 239 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 166 201 3.0E-11 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS13470 03cbacd4fe4aee8b9bdfd52ba87d4aac 239 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 5 88 3.2E-31 T 28-03-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 RK98_RS13470 03cbacd4fe4aee8b9bdfd52ba87d4aac 239 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 2 236 44.242 T 28-03-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 RK98_RS13470 03cbacd4fe4aee8b9bdfd52ba87d4aac 239 Gene3D G3DSA:2.160.10.10 84 237 7.1E-43 T 28-03-2018 RK98_RS13470 03cbacd4fe4aee8b9bdfd52ba87d4aac 239 SUPERFAMILY SSF51161 88 224 4.3E-51 T 28-03-2018 IPR011004 Trimeric LpxA-like RK98_RS13470 03cbacd4fe4aee8b9bdfd52ba87d4aac 239 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 175 203 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RK98_RS13470 03cbacd4fe4aee8b9bdfd52ba87d4aac 239 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 157 4.1E-6 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS13470 03cbacd4fe4aee8b9bdfd52ba87d4aac 239 Gene3D G3DSA:3.30.70.250 4 83 5.6E-34 T 28-03-2018 RK98_RS13470 03cbacd4fe4aee8b9bdfd52ba87d4aac 239 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 7 237 9.5E-114 T 28-03-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 RK98_RS05485 c8823ed3ca8acba98df326dd023d14d2 295 Gene3D G3DSA:3.40.50.720 35 289 4.4E-23 T 28-03-2018 RK98_RS05485 c8823ed3ca8acba98df326dd023d14d2 295 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 165 1.6E-23 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 RK98_RS05485 c8823ed3ca8acba98df326dd023d14d2 295 SUPERFAMILY SSF51735 2 242 5.11E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05485 c8823ed3ca8acba98df326dd023d14d2 295 Gene3D G3DSA:3.40.50.720 1 34 5.8E-4 T 28-03-2018 RK98_RS14285 bf3c88d788f2f46be97c1079aef86f46 179 SUPERFAMILY SSF100950 2 174 1.67E-45 T 28-03-2018 RK98_RS14285 bf3c88d788f2f46be97c1079aef86f46 179 Gene3D G3DSA:3.40.50.10420 1 178 4.9E-43 T 28-03-2018 RK98_RS14285 bf3c88d788f2f46be97c1079aef86f46 179 PIRSF PIRSF006806 1 179 1.9E-41 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase RK98_RS14285 bf3c88d788f2f46be97c1079aef86f46 179 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 174 3.2E-37 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase RK98_RS14285 bf3c88d788f2f46be97c1079aef86f46 179 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 175 9.2E-48 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase RK98_RS03895 8977f3f62a178b109e3571f35f611fab 901 Hamap MF_01871 UPF0753 protein . 6 900 23.043 T 28-03-2018 IPR018752 Uncharacterised protein family UPF0753 RK98_RS03895 8977f3f62a178b109e3571f35f611fab 901 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 11 886 1.4E-255 T 28-03-2018 IPR018752 Uncharacterised protein family UPF0753 RK98_RS03895 8977f3f62a178b109e3571f35f611fab 901 Gene3D G3DSA:3.40.190.10 14 590 9.5E-4 T 28-03-2018 RK98_RS01260 cdf8cbc00f5efb709f1cabdf1bfcaa89 243 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 5 196 1.7E-43 T 28-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 RK98_RS01260 cdf8cbc00f5efb709f1cabdf1bfcaa89 243 SUPERFAMILY SSF52317 16 189 3.25E-23 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS01260 cdf8cbc00f5efb709f1cabdf1bfcaa89 243 Gene3D G3DSA:3.40.50.880 9 173 2.8E-17 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS01145 bcd4d180709459c2174389a36fea0036 505 Gene3D G3DSA:3.40.50.300 6 260 4.4E-17 T 28-03-2018 RK98_RS01145 bcd4d180709459c2174389a36fea0036 505 Pfam PF00005 ABC transporter 37 162 1.2E-5 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS01145 bcd4d180709459c2174389a36fea0036 505 SUPERFAMILY SSF52540 31 227 1.01E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02175 ac5be265af92d638440858ab7946e524 216 Pfam PF12917 HD containing hydrolase-like enzyme 1 210 1.7E-83 T 28-03-2018 IPR027366 HD containing hydrolase-like enzyme RK98_RS02175 ac5be265af92d638440858ab7946e524 216 Gene3D G3DSA:1.10.3210.10 1 215 1.6E-44 T 28-03-2018 RK98_RS02175 ac5be265af92d638440858ab7946e524 216 SUPERFAMILY SSF109604 3 188 6.6E-33 T 28-03-2018 RK98_RS05160 9366a08527e048e0a35cb19619a79e4b 587 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 346 563 4.3E-26 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RK98_RS05160 9366a08527e048e0a35cb19619a79e4b 587 SUPERFAMILY SSF51695 342 567 8.63E-57 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS05160 9366a08527e048e0a35cb19619a79e4b 587 Pfam PF10110 Membrane domain of glycerophosphoryl diester phosphodiesterase 8 327 5.0E-80 T 28-03-2018 IPR018476 Glycerophosphoryl diester phosphodiesterase, membrane domain RK98_RS05160 9366a08527e048e0a35cb19619a79e4b 587 Gene3D G3DSA:3.20.20.190 339 578 5.7E-55 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS09185 2515e49b00aab55e83fee2e5eaf2d455 246 Pfam PF02146 Sir2 family 26 201 1.4E-54 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 RK98_RS09185 2515e49b00aab55e83fee2e5eaf2d455 246 Gene3D G3DSA:3.40.50.1220 3 246 7.4E-55 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS09185 2515e49b00aab55e83fee2e5eaf2d455 246 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 10 244 58.265 T 28-03-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 RK98_RS09185 2515e49b00aab55e83fee2e5eaf2d455 246 SUPERFAMILY SSF52467 4 244 1.21E-74 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS07895 aaa514741bbda3d97233393a363ba55b 128 Pfam PF04138 GtrA-like protein 12 123 3.0E-23 T 28-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 RK98_RS06935 a681afdf26c4b178a54a8b749f06c5f4 482 PIRSF PIRSF006060 8 480 1.2E-84 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS06935 a681afdf26c4b178a54a8b749f06c5f4 482 Pfam PF13520 Amino acid permease 34 449 3.2E-57 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS14645 1fe02720b31c928780e44a02ac19bd43 372 SUPERFAMILY SSF52402 7 243 2.65E-59 T 28-03-2018 RK98_RS14645 1fe02720b31c928780e44a02ac19bd43 372 Gene3D G3DSA:3.40.50.620 2 212 6.9E-69 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS14645 1fe02720b31c928780e44a02ac19bd43 372 Pfam PF03054 tRNA methyl transferase 7 358 7.0E-148 T 28-03-2018 RK98_RS14645 1fe02720b31c928780e44a02ac19bd43 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 358 6.0E-137 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 RK98_RS14645 1fe02720b31c928780e44a02ac19bd43 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 6 359 40.884 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 RK98_RS14645 1fe02720b31c928780e44a02ac19bd43 372 Gene3D G3DSA:2.40.30.10 278 371 3.0E-26 T 28-03-2018 RK98_RS14645 1fe02720b31c928780e44a02ac19bd43 372 Gene3D G3DSA:2.30.30.280 213 276 1.0E-27 T 28-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 RK98_RS01265 10d56e1a812ef3e8ef810b94d25cd982 437 Pfam PF08353 Domain of unknown function (DUF1727) 313 421 6.3E-29 T 28-03-2018 IPR013564 Domain of unknown function DUF1727 RK98_RS01265 10d56e1a812ef3e8ef810b94d25cd982 437 Gene3D G3DSA:3.40.1190.10 46 297 4.4E-42 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS01265 10d56e1a812ef3e8ef810b94d25cd982 437 SUPERFAMILY SSF53623 50 190 3.36E-32 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS01265 10d56e1a812ef3e8ef810b94d25cd982 437 SUPERFAMILY SSF53623 235 292 3.36E-32 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS01265 10d56e1a812ef3e8ef810b94d25cd982 437 Pfam PF08245 Mur ligase middle domain 53 274 6.3E-18 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS01265 10d56e1a812ef3e8ef810b94d25cd982 437 Gene3D G3DSA:3.90.190.20 298 415 0.0042 T 28-03-2018 RK98_RS10360 b3d054d9daf376f8c2a07e06d1407bba 67 Pfam PF06855 YozE SAM-like fold 2 65 9.4E-20 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS10360 b3d054d9daf376f8c2a07e06d1407bba 67 SUPERFAMILY SSF140652 1 65 1.44E-19 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS10360 b3d054d9daf376f8c2a07e06d1407bba 67 Gene3D G3DSA:1.10.150.260 1 67 2.0E-23 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS13905 4491822bf4b19a16d2b6248ecaea52cd 219 Pfam PF02224 Cytidylate kinase 6 216 2.3E-70 T 28-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 RK98_RS13905 4491822bf4b19a16d2b6248ecaea52cd 219 Gene3D G3DSA:3.40.50.300 1 219 1.7E-53 T 28-03-2018 RK98_RS13905 4491822bf4b19a16d2b6248ecaea52cd 219 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 213 5.3E-73 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 RK98_RS13905 4491822bf4b19a16d2b6248ecaea52cd 219 Hamap MF_00238 Cytidylate kinase [cmk]. 4 219 32.359 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 RK98_RS13905 4491822bf4b19a16d2b6248ecaea52cd 219 SUPERFAMILY SSF52540 1 217 1.23E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS09280 bc9704e6c65a7fecbfd8059ff90fa93a 356 Pfam PF01168 Alanine racemase, N-terminal domain 6 220 1.7E-19 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 RK98_RS09280 bc9704e6c65a7fecbfd8059ff90fa93a 356 Gene3D G3DSA:3.20.20.10 1 220 5.7E-21 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS09280 bc9704e6c65a7fecbfd8059ff90fa93a 356 SUPERFAMILY SSF51419 6 226 2.88E-22 T 28-03-2018 IPR029066 PLP-binding barrel RK98_RS10960 38c72d7cf411e988f06406ab7c40912b 404 PIRSF PIRSF500216 1 404 2.7E-164 T 28-03-2018 IPR024024 D-alanyl transfer protein DltB RK98_RS10960 38c72d7cf411e988f06406ab7c40912b 404 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 3 403 2.4E-157 T 28-03-2018 IPR024024 D-alanyl transfer protein DltB RK98_RS10960 38c72d7cf411e988f06406ab7c40912b 404 PIRSF PIRSF016636 2 403 1.5E-78 T 28-03-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB RK98_RS10960 38c72d7cf411e988f06406ab7c40912b 404 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 58 374 5.1E-20 T 28-03-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT RK98_RS04275 de24bf4ba73367edecfb3c260613defc 192 SUPERFAMILY SSF53271 2 186 2.04E-40 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like RK98_RS04275 de24bf4ba73367edecfb3c260613defc 192 Gene3D G3DSA:3.40.50.2020 3 188 9.9E-19 T 28-03-2018 RK98_RS04275 de24bf4ba73367edecfb3c260613defc 192 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 39.559 T 28-03-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 RK98_RS04275 de24bf4ba73367edecfb3c260613defc 192 Pfam PF00156 Phosphoribosyl transferase domain 33 157 2.1E-6 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RK98_RS04275 de24bf4ba73367edecfb3c260613defc 192 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 191 2.9E-99 T 28-03-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 RK98_RS03285 5442817597208b902bb353e9b8a495aa 391 Pfam PF01546 Peptidase family M20/M25/M40 73 383 7.1E-33 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RK98_RS03285 5442817597208b902bb353e9b8a495aa 391 Gene3D G3DSA:3.40.630.10 4 273 3.5E-61 T 28-03-2018 RK98_RS03285 5442817597208b902bb353e9b8a495aa 391 PIRSF PIRSF005962 3 387 1.5E-127 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 RK98_RS03285 5442817597208b902bb353e9b8a495aa 391 Gene3D G3DSA:3.40.630.10 274 384 1.2E-4 T 28-03-2018 RK98_RS03285 5442817597208b902bb353e9b8a495aa 391 Pfam PF07687 Peptidase dimerisation domain 187 279 1.2E-9 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS03285 5442817597208b902bb353e9b8a495aa 391 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 374 7.5E-116 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 RK98_RS03285 5442817597208b902bb353e9b8a495aa 391 SUPERFAMILY SSF55031 185 296 5.36E-28 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS03285 5442817597208b902bb353e9b8a495aa 391 SUPERFAMILY SSF53187 5 198 9.11E-82 T 28-03-2018 RK98_RS03285 5442817597208b902bb353e9b8a495aa 391 SUPERFAMILY SSF53187 299 382 9.11E-82 T 28-03-2018 RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 305 1.0E-44 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 PIRSF PIRSF000445 1 435 5.0E-142 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 324 418 3.0E-19 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 28-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 420 3.1E-135 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 SUPERFAMILY SSF69742 1 158 2.88E-44 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 SUPERFAMILY SSF51735 162 315 2.61E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 27.521 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 SUPERFAMILY SSF69075 325 420 5.1E-12 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 Gene3D G3DSA:1.10.1200.70 333 420 5.9E-20 T 28-03-2018 RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 Gene3D G3DSA:3.40.50.720 161 313 1.1E-19 T 28-03-2018 RK98_RS14920 3f3fe2f516229a51c9d7d58869b1a76c 448 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 2.1E-42 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 RK98_RS08015 e312b06e58f9c46266549e6219131993 467 SUPERFAMILY SSF103473 2 178 1.83E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS08015 e312b06e58f9c46266549e6219131993 467 SUPERFAMILY SSF103473 231 402 1.83E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS08015 e312b06e58f9c46266549e6219131993 467 SUPERFAMILY SSF103473 433 461 1.83E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS08015 e312b06e58f9c46266549e6219131993 467 Gene3D G3DSA:1.20.1250.20 242 467 7.1E-29 T 28-03-2018 RK98_RS08015 e312b06e58f9c46266549e6219131993 467 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 1 423 3.1E-101 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 RK98_RS08015 e312b06e58f9c46266549e6219131993 467 Pfam PF07690 Major Facilitator Superfamily 2 392 5.5E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS08015 e312b06e58f9c46266549e6219131993 467 Gene3D G3DSA:1.20.1250.20 1 174 6.3E-33 T 28-03-2018 RK98_RS09065 77041a6d7ef51a82ad004c114e88f38d 268 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 265 35.004 T 28-03-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0005215|GO:0006810|GO:0016021 RK98_RS09065 77041a6d7ef51a82ad004c114e88f38d 268 Pfam PF02361 Cobalt transport protein 14 236 2.5E-48 T 28-03-2018 IPR003339 ABC/ECF transporter, transmembrane component RK98_RS08530 6580c224f5ce31f8abc43dd061b4c60c 211 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 178 6.8E-35 T 28-03-2018 IPR023214 HAD-like domain RK98_RS08530 6580c224f5ce31f8abc43dd061b4c60c 211 SUPERFAMILY SSF56784 1 200 7.19E-46 T 28-03-2018 IPR023214 HAD-like domain RK98_RS08530 6580c224f5ce31f8abc43dd061b4c60c 211 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 85 178 3.0E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RK98_RS08530 6580c224f5ce31f8abc43dd061b4c60c 211 Gene3D G3DSA:3.40.50.1000 1 200 1.0E-33 T 28-03-2018 IPR023214 HAD-like domain RK98_RS14160 2c0d0193dcba84db3d9c86eb359971ed 120 Pfam PF03780 Asp23 family, cell envelope-related function 12 116 3.1E-26 T 28-03-2018 IPR005531 Alkaline shock protein Asp23 RK98_RS09750 cdf8db1f3c5755461a357c81391c3d47 231 Pfam PF06737 Transglycosylase-like domain 154 231 1.8E-27 T 28-03-2018 IPR010618 Transglycosylase-like RK98_RS09750 cdf8db1f3c5755461a357c81391c3d47 231 SUPERFAMILY SSF53955 155 229 3.1E-17 T 28-03-2018 IPR023346 Lysozyme-like domain RK98_RS09750 cdf8db1f3c5755461a357c81391c3d47 231 Gene3D G3DSA:1.10.530.10 128 231 8.0E-16 T 28-03-2018 RK98_RS11955 79d8f55fd3ce26188b8752508c40a9f2 379 SUPERFAMILY SSF52374 190 219 5.32E-17 T 28-03-2018 RK98_RS11955 79d8f55fd3ce26188b8752508c40a9f2 379 SUPERFAMILY SSF52374 10 104 5.32E-17 T 28-03-2018 RK98_RS11955 79d8f55fd3ce26188b8752508c40a9f2 379 Hamap MF_01539 UPF0348 protein . 2 376 36.743 T 28-03-2018 IPR008513 Uncharacterised protein family UPF0348 RK98_RS11955 79d8f55fd3ce26188b8752508c40a9f2 379 Pfam PF05636 HIGH Nucleotidyl Transferase 1 368 1.7E-120 T 28-03-2018 IPR008513 Uncharacterised protein family UPF0348 RK98_RS11955 79d8f55fd3ce26188b8752508c40a9f2 379 Gene3D G3DSA:3.40.50.620 1 231 9.9E-47 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS14905 c8516ddba07fd5fa5e8aaabff81fda2b 222 SUPERFAMILY SSF69618 20 219 1.11E-43 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14905 c8516ddba07fd5fa5e8aaabff81fda2b 222 Gene3D G3DSA:3.40.50.10090 129 221 3.5E-13 T 28-03-2018 RK98_RS14905 c8516ddba07fd5fa5e8aaabff81fda2b 222 Pfam PF02602 Uroporphyrinogen-III synthase HemD 20 215 2.7E-35 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 RK98_RS14905 c8516ddba07fd5fa5e8aaabff81fda2b 222 Gene3D G3DSA:3.40.50.10090 32 128 6.8E-16 T 28-03-2018 RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 426 4.6E-108 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 492 41.815 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 Gene3D G3DSA:3.40.140.20 198 341 1.1E-51 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 SUPERFAMILY SSF53927 192 492 2.51E-117 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 Pfam PF02142 MGS-like domain 13 128 1.5E-29 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 492 6.8E-194 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 PIRSF PIRSF000414 1 492 5.3E-192 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 SUPERFAMILY SSF52335 2 190 3.27E-68 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 SMART SM00851 13 128 2.2E-55 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 Gene3D G3DSA:3.40.140.20 342 482 2.2E-45 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 Gene3D G3DSA:3.40.50.1380 1 190 2.1E-70 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain RK98_RS11680 1221e83d11e8cbb28459607123ab20ac 492 SMART SM00798 133 427 1.3E-176 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS01525 36285378b2d463e54dbbacf598d2804a 96 Pfam PF03642 MAP domain 1 88 7.7E-33 T 28-03-2018 IPR005298 MAP domain RK98_RS01525 36285378b2d463e54dbbacf598d2804a 96 SUPERFAMILY SSF54334 6 94 4.97E-6 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS01525 36285378b2d463e54dbbacf598d2804a 96 Gene3D G3DSA:3.10.20.120 1 93 2.7E-20 T 28-03-2018 RK98_RS13370 7063e9e44b34b221ee318517c055fd17 233 SUPERFAMILY SSF52540 2 230 1.31E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS13370 7063e9e44b34b221ee318517c055fd17 233 Pfam PF00005 ABC transporter 18 156 5.0E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS13370 7063e9e44b34b221ee318517c055fd17 233 SMART SM00382 27 205 1.5E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS13370 7063e9e44b34b221ee318517c055fd17 233 Gene3D G3DSA:3.40.50.300 1 232 6.0E-55 T 28-03-2018 RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 Gene3D G3DSA:2.40.50.140 65 126 1.6E-25 T 28-03-2018 RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 SUPERFAMILY SSF50104 1 62 1.02E-21 T 28-03-2018 IPR008991 Translation protein SH3-like domain RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 SMART SM00841 129 184 1.4E-31 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 SUPERFAMILY SSF50249 128 184 3.6E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 SMART SM01185 67 121 5.4E-27 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 Gene3D G3DSA:2.40.50.140 129 184 2.3E-26 T 28-03-2018 RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 SUPERFAMILY SSF50249 65 129 4.28E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.3E-27 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 7.5E-26 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.074 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 184 4.6E-80 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 Gene3D G3DSA:2.30.30.30 2 61 4.6E-27 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 PIRSF PIRSF005901 1 185 2.9E-72 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP RK98_RS14175 72c3e8581435acb9619578e2b167799b 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 2.5E-23 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 RK98_RS09255 40df66e302adc422766264834b2abe73 79 Pfam PF10031 Small integral membrane protein (DUF2273) 19 66 4.9E-13 T 28-03-2018 IPR018730 Protein of unknown function DUF2273 RK98_RS11280 d6f81bb5dcf5fb9335f0da26d4b5ddb0 239 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 229 4.6E-50 T 28-03-2018 IPR008681 Negative regulator of genetic competence, MecA RK98_RS11280 d6f81bb5dcf5fb9335f0da26d4b5ddb0 239 PIRSF PIRSF029008 1 236 1.6E-69 T 28-03-2018 IPR008681 Negative regulator of genetic competence, MecA RK98_RS11280 d6f81bb5dcf5fb9335f0da26d4b5ddb0 239 Hamap MF_01124 Adapter protein MecA [mecA]. 1 234 25.746 T 28-03-2018 IPR008681 Negative regulator of genetic competence, MecA RK98_RS01855 ecc250348e0fb47c4e156bf2facf134d 238 SUPERFAMILY SSF51306 124 237 9.81E-25 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C RK98_RS01855 ecc250348e0fb47c4e156bf2facf134d 238 SMART SM00530 7 62 2.1E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS01855 ecc250348e0fb47c4e156bf2facf134d 238 Pfam PF00717 Peptidase S24-like 160 223 8.4E-16 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C RK98_RS01855 ecc250348e0fb47c4e156bf2facf134d 238 SUPERFAMILY SSF47413 4 61 7.32E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS01855 ecc250348e0fb47c4e156bf2facf134d 238 Gene3D G3DSA:2.10.109.10 128 238 6.5E-21 T 28-03-2018 RK98_RS01855 ecc250348e0fb47c4e156bf2facf134d 238 Gene3D G3DSA:1.10.260.40 3 102 2.6E-19 T 28-03-2018 RK98_RS01855 ecc250348e0fb47c4e156bf2facf134d 238 Pfam PF01381 Helix-turn-helix 8 62 2.9E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS03410 dc8d26c71e8a4338a292f05d297c2892 351 SMART SM00670 153 258 2.6E-8 T 28-03-2018 IPR002716 PIN domain RK98_RS03410 dc8d26c71e8a4338a292f05d297c2892 351 Gene3D G3DSA:3.40.50.1010 149 282 6.5E-22 T 28-03-2018 IPR029060 PIN domain-like RK98_RS03410 dc8d26c71e8a4338a292f05d297c2892 351 SUPERFAMILY SSF88723 155 279 8.83E-21 T 28-03-2018 IPR029060 PIN domain-like RK98_RS00030 d380d96b4e877d69f50903610f7d6d75 285 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 282 38.795 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00030 d380d96b4e877d69f50903610f7d6d75 285 Pfam PF01039 Carboxyl transferase domain 61 243 2.0E-18 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 RK98_RS00030 d380d96b4e877d69f50903610f7d6d75 285 Gene3D G3DSA:3.90.226.10 16 285 9.3E-70 T 28-03-2018 RK98_RS00030 d380d96b4e877d69f50903610f7d6d75 285 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 5 283 4.0E-125 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00030 d380d96b4e877d69f50903610f7d6d75 285 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 2.5E-37 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00030 d380d96b4e877d69f50903610f7d6d75 285 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 2.5E-37 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00030 d380d96b4e877d69f50903610f7d6d75 285 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 2.5E-37 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00030 d380d96b4e877d69f50903610f7d6d75 285 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 2.5E-37 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00030 d380d96b4e877d69f50903610f7d6d75 285 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 2.5E-37 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00030 d380d96b4e877d69f50903610f7d6d75 285 SUPERFAMILY SSF52096 29 280 8.88E-82 T 28-03-2018 IPR029045 ClpP/crotonase-like domain RK98_RS06265 bac6988d6ca83920dd0f801ecb8d15e3 322 Gene3D G3DSA:3.40.50.1820 16 317 2.4E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS06265 bac6988d6ca83920dd0f801ecb8d15e3 322 Pfam PF00561 alpha/beta hydrolase fold 38 302 3.3E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS06265 bac6988d6ca83920dd0f801ecb8d15e3 322 PIRSF PIRSF000443 1 322 2.2E-83 T 28-03-2018 IPR008220 Homoserine/serine acetyltransferase MetX-like GO:0005737|GO:0009058|GO:0016747 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344 RK98_RS06265 bac6988d6ca83920dd0f801ecb8d15e3 322 SUPERFAMILY SSF53474 6 315 8.99E-60 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS00275 996df1ab2d1da60404084baea14e8df2 1274 SMART SM00843 1204 1269 4.7E-35 T 28-03-2018 IPR018541 FtsK gamma domain RK98_RS00275 996df1ab2d1da60404084baea14e8df2 1274 SUPERFAMILY SSF52540 895 1183 1.73E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS00275 996df1ab2d1da60404084baea14e8df2 1274 Gene3D G3DSA:3.40.50.300 82 1151 4.2E-35 T 28-03-2018 RK98_RS00275 996df1ab2d1da60404084baea14e8df2 1274 SUPERFAMILY SSF46785 1205 1270 1.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS00275 996df1ab2d1da60404084baea14e8df2 1274 Pfam PF09397 Ftsk gamma domain 1206 1267 3.8E-27 T 28-03-2018 IPR018541 FtsK gamma domain RK98_RS00275 996df1ab2d1da60404084baea14e8df2 1274 Gene3D G3DSA:1.10.10.10 1206 1260 3.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS00275 996df1ab2d1da60404084baea14e8df2 1274 Pfam PF01580 FtsK/SpoIIIE family 922 1060 3.1E-44 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 RK98_RS02260 dbefcc28c0e83695fd78822ec7a42912 106 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 4 102 4.8E-33 T 28-03-2018 IPR022551 Protein of unknown function DUF2847 RK98_RS02260 dbefcc28c0e83695fd78822ec7a42912 106 SUPERFAMILY SSF52833 3 91 2.24E-9 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS02260 dbefcc28c0e83695fd78822ec7a42912 106 Gene3D G3DSA:3.40.30.10 2 103 2.8E-39 T 28-03-2018 RK98_RS02260 dbefcc28c0e83695fd78822ec7a42912 106 Pfam PF11009 Protein of unknown function (DUF2847) 4 101 1.9E-33 T 28-03-2018 IPR022551 Protein of unknown function DUF2847 RK98_RS02685 b3d92b6fcbdba2a85c30052252dbff28 205 Gene3D G3DSA:1.20.58.220 99 204 2.5E-5 T 28-03-2018 RK98_RS02685 b3d92b6fcbdba2a85c30052252dbff28 205 Pfam PF01865 Protein of unknown function DUF47 2 202 3.8E-20 T 28-03-2018 IPR018445 Putative phosphate transport regulator RK98_RS01490 f9dd30eb15698e729717969627a66488 290 SMART SM00382 25 196 3.2E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS01490 f9dd30eb15698e729717969627a66488 290 Pfam PF00005 ABC transporter 16 148 1.1E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS01490 f9dd30eb15698e729717969627a66488 290 SUPERFAMILY SSF52540 2 204 7.27E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS01490 f9dd30eb15698e729717969627a66488 290 Gene3D G3DSA:3.40.50.300 1 263 4.5E-46 T 28-03-2018 RK98_RS11830 cc7fe67859133f672df6fe37a75e8d55 269 Gene3D G3DSA:1.10.3720.10 7 266 5.1E-33 T 28-03-2018 RK98_RS11830 cc7fe67859133f672df6fe37a75e8d55 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 261 9.2E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS11830 cc7fe67859133f672df6fe37a75e8d55 269 SUPERFAMILY SSF161098 9 246 1.96E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS04555 ada0a75702b19a65e0509413e21f6610 354 ProSitePatterns PS00942 glpT family of transporters signature. 152 168 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 RK98_RS04555 ada0a75702b19a65e0509413e21f6610 354 Gene3D G3DSA:1.20.1250.20 17 224 6.1E-30 T 28-03-2018 RK98_RS04555 ada0a75702b19a65e0509413e21f6610 354 Gene3D G3DSA:1.20.1250.20 247 354 5.0E-17 T 28-03-2018 RK98_RS04555 ada0a75702b19a65e0509413e21f6610 354 SUPERFAMILY SSF103473 8 350 1.12E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS04555 ada0a75702b19a65e0509413e21f6610 354 Pfam PF07690 Major Facilitator Superfamily 33 345 4.1E-41 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS05925 ad233d7c7821e8756854686b87f3c3b1 502 Gene3D G3DSA:1.10.510.10 217 454 1.1E-26 T 28-03-2018 RK98_RS05925 ad233d7c7821e8756854686b87f3c3b1 502 Pfam PF00069 Protein kinase domain 129 363 1.6E-26 T 28-03-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 RK98_RS05925 ad233d7c7821e8756854686b87f3c3b1 502 Gene3D G3DSA:3.30.200.20 117 216 3.1E-8 T 28-03-2018 RK98_RS05925 ad233d7c7821e8756854686b87f3c3b1 502 SUPERFAMILY SSF56112 129 357 1.02E-37 T 28-03-2018 IPR011009 Protein kinase-like domain RK98_RS02510 87f29d8eb5c1ea407d885195b8efc83a 160 Pfam PF04073 Aminoacyl-tRNA editing domain 35 148 4.7E-22 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RK98_RS02510 87f29d8eb5c1ea407d885195b8efc83a 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 7 157 2.4E-55 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RK98_RS02510 87f29d8eb5c1ea407d885195b8efc83a 160 Gene3D G3DSA:3.90.960.10 1 159 1.9E-37 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RK98_RS02510 87f29d8eb5c1ea407d885195b8efc83a 160 SUPERFAMILY SSF55826 7 154 1.96E-37 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 RK98_RS02510 87f29d8eb5c1ea407d885195b8efc83a 160 PIRSF PIRSF006181 2 160 1.7E-58 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC RK98_RS03325 e26d3980de1f8fabd50b06ec80ea290a 202 SUPERFAMILY SSF53335 9 200 6.15E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS03325 e26d3980de1f8fabd50b06ec80ea290a 202 Gene3D G3DSA:3.40.50.150 9 202 5.2E-32 T 28-03-2018 RK98_RS03325 e26d3980de1f8fabd50b06ec80ea290a 202 Pfam PF05175 Methyltransferase small domain 27 198 6.0E-53 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 RK98_RS09220 a75d8a20ef8ede3e586c0b33f5db3df1 570 Pfam PF02378 Phosphotransferase system, EIIC 29 349 3.2E-75 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS09220 a75d8a20ef8ede3e586c0b33f5db3df1 570 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 421 563 1.5E-61 T 28-03-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 RK98_RS09220 a75d8a20ef8ede3e586c0b33f5db3df1 570 SUPERFAMILY SSF52794 468 569 1.75E-18 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS09220 a75d8a20ef8ede3e586c0b33f5db3df1 570 TIGRFAM TIGR00394 lac_pts_IIC: PTS system, lactose-specific IIC component 12 423 7.6E-233 T 28-03-2018 IPR004801 Phosphotransferase system, lactose-specific IIC component GO:0008982|GO:0016021|GO:0022869 KEGG: 00052+2.7.1.207|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 RK98_RS09220 a75d8a20ef8ede3e586c0b33f5db3df1 570 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 14 422 7.4E-80 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 RK98_RS09220 a75d8a20ef8ede3e586c0b33f5db3df1 570 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 469 543 5.3E-10 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS09220 a75d8a20ef8ede3e586c0b33f5db3df1 570 Gene3D G3DSA:3.40.50.2300 462 569 1.1E-19 T 28-03-2018 RK98_RS02010 b8819a860012232a931bb33b072b227d 68 SUPERFAMILY SSF47413 3 42 2.51E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS02010 b8819a860012232a931bb33b072b227d 68 Gene3D G3DSA:1.10.260.40 1 68 2.2E-6 T 28-03-2018 RK98_RS07150 972413c864154f52d255cf39ef0634f6 375 Pfam PF00535 Glycosyl transferase family 2 42 159 1.6E-16 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RK98_RS07150 972413c864154f52d255cf39ef0634f6 375 Gene3D G3DSA:3.90.550.10 36 373 2.9E-24 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS07150 972413c864154f52d255cf39ef0634f6 375 SUPERFAMILY SSF53448 41 349 1.9E-28 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Pfam PF14492 Elongation Factor G, domain II 403 476 6.0E-33 T 28-03-2018 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 SUPERFAMILY SSF54211 478 598 8.85E-43 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.5E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.5E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Pfam PF03144 Elongation factor Tu domain 2 323 390 3.5E-14 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Gene3D G3DSA:3.30.70.870 400 490 1.1E-33 T 28-03-2018 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 SUPERFAMILY SSF52540 6 280 1.0E-109 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 2.2E-43 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 SUPERFAMILY SSF54980 599 689 7.19E-31 T 28-03-2018 IPR035647 EF-G domain III/V-like RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 1.1E-69 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 SMART SM00838 599 686 6.9E-58 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 SUPERFAMILY SSF50447 263 403 1.59E-34 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 108.328 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Pfam PF03764 Elongation factor G, domain IV 478 596 7.1E-45 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Pfam PF00679 Elongation factor G C-terminus 599 685 1.3E-31 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Gene3D G3DSA:2.40.30.10 286 399 3.1E-31 T 28-03-2018 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 SUPERFAMILY SSF54980 403 480 2.09E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 SMART SM00889 479 597 1.6E-70 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Gene3D G3DSA:3.40.50.300 1 285 9.6E-65 T 28-03-2018 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Gene3D G3DSA:3.30.70.240 613 690 8.5E-33 T 28-03-2018 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 691 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 RK98_RS03295 b7d50595607e8f2227cd86a81dfab433 693 Gene3D G3DSA:3.30.230.10 491 612 7.5E-45 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS04595 1c19a7cfb062a80facdc075d92db64d0 94 Gene3D G3DSA:3.40.50.2300 1 93 2.0E-17 T 28-03-2018 RK98_RS04595 1c19a7cfb062a80facdc075d92db64d0 94 SUPERFAMILY SSF52794 1 91 1.26E-18 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS04595 1c19a7cfb062a80facdc075d92db64d0 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 84 1.5E-13 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS12720 8095974a6711837e7b961511c3bb1b01 428 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 427 1.9E-87 T 28-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 RK98_RS12720 8095974a6711837e7b961511c3bb1b01 428 Pfam PF02163 Peptidase family M50 9 413 2.3E-77 T 28-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 RK98_RS12720 8095974a6711837e7b961511c3bb1b01 428 Pfam PF13180 PDZ domain 191 266 3.5E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS12720 8095974a6711837e7b961511c3bb1b01 428 Gene3D G3DSA:2.30.42.10 199 292 1.1E-15 T 28-03-2018 RK98_RS12720 8095974a6711837e7b961511c3bb1b01 428 SUPERFAMILY SSF50156 176 267 1.33E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS03850 f5cd69442966619a5e307e8966079a06 219 Gene3D G3DSA:1.10.3720.10 1 219 4.4E-35 T 28-03-2018 RK98_RS03850 f5cd69442966619a5e307e8966079a06 219 SUPERFAMILY SSF161098 10 204 2.49E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS03850 f5cd69442966619a5e307e8966079a06 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 6.1E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS06295 c2bcdade53ddb9929f66c64a1fb96a95 270 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 1 270 23.072 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RK98_RS06295 c2bcdade53ddb9929f66c64a1fb96a95 270 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 207 217 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site RK98_RS06295 c2bcdade53ddb9929f66c64a1fb96a95 270 Gene3D G3DSA:3.40.1190.20 2 270 2.3E-39 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS06295 c2bcdade53ddb9929f66c64a1fb96a95 270 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 7 267 4.0E-55 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RK98_RS06295 c2bcdade53ddb9929f66c64a1fb96a95 270 SUPERFAMILY SSF53613 6 267 4.64E-62 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS06295 c2bcdade53ddb9929f66c64a1fb96a95 270 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 91 101 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site RK98_RS06295 c2bcdade53ddb9929f66c64a1fb96a95 270 Pfam PF01256 Carbohydrate kinase 25 262 2.1E-57 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 RK98_RS09820 46e27991fc4e6490ba4ea6bb264b6412 400 Pfam PF01098 Cell cycle protein 18 387 3.1E-95 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 RK98_RS08090 ae1812f83161067d0c5e290d922804da 178 Pfam PF00583 Acetyltransferase (GNAT) family 46 142 1.8E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS08090 ae1812f83161067d0c5e290d922804da 178 SUPERFAMILY SSF55729 1 158 2.09E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS08090 ae1812f83161067d0c5e290d922804da 178 Gene3D G3DSA:3.40.630.30 5 168 1.2E-21 T 28-03-2018 RK98_RS10440 d2ef10438510fe670b6ba6cef87936a2 341 Gene3D G3DSA:3.30.70.260 255 340 2.5E-17 T 28-03-2018 RK98_RS10440 d2ef10438510fe670b6ba6cef87936a2 341 SMART SM00930 262 338 2.4E-19 T 28-03-2018 IPR018449 NIL domain RK98_RS10440 d2ef10438510fe670b6ba6cef87936a2 341 SMART SM00382 30 226 4.8E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS10440 d2ef10438510fe670b6ba6cef87936a2 341 Pfam PF00005 ABC transporter 22 169 4.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS10440 d2ef10438510fe670b6ba6cef87936a2 341 Gene3D G3DSA:3.40.50.300 1 254 1.2E-73 T 28-03-2018 RK98_RS10440 d2ef10438510fe670b6ba6cef87936a2 341 Pfam PF09383 NIL domain 265 337 2.5E-13 T 28-03-2018 IPR018449 NIL domain RK98_RS10440 d2ef10438510fe670b6ba6cef87936a2 341 SUPERFAMILY SSF55021 248 340 6.3E-19 T 28-03-2018 RK98_RS10440 d2ef10438510fe670b6ba6cef87936a2 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS10440 d2ef10438510fe670b6ba6cef87936a2 341 SUPERFAMILY SSF52540 1 240 1.91E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02210 1dd87875593cdb818d27df9cc0c0a4b0 224 Gene3D G3DSA:3.40.50.2020 45 224 6.1E-18 T 28-03-2018 RK98_RS02210 1dd87875593cdb818d27df9cc0c0a4b0 224 SUPERFAMILY SSF53271 64 223 6.82E-18 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like RK98_RS14705 5b6fbb35d310262bde9353a649f01435 291 SMART SM00646 178 286 1.9E-37 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RK98_RS14705 5b6fbb35d310262bde9353a649f01435 291 Pfam PF08239 Bacterial SH3 domain 52 100 2.6E-7 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type RK98_RS14705 5b6fbb35d310262bde9353a649f01435 291 SMART SM00287 41 105 1.8E-15 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type RK98_RS14705 5b6fbb35d310262bde9353a649f01435 291 Gene3D G3DSA:2.40.50.110 36 102 1.6E-9 T 28-03-2018 RK98_RS14705 5b6fbb35d310262bde9353a649f01435 291 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 122 286 2.0E-44 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 RK98_RS14705 5b6fbb35d310262bde9353a649f01435 291 PIRSF PIRSF037730 7 291 9.0E-130 T 28-03-2018 IPR017273 Probable cell wall amidase LytH GO:0005576|GO:0016811|GO:0071555 RK98_RS14705 5b6fbb35d310262bde9353a649f01435 291 SUPERFAMILY SSF53187 119 289 8.79E-47 T 28-03-2018 RK98_RS14705 5b6fbb35d310262bde9353a649f01435 291 Gene3D G3DSA:3.40.630.40 103 291 4.0E-51 T 28-03-2018 RK98_RS05205 f38499cf83ff7a20472318fbc025a3fd 346 Gene3D G3DSA:3.40.50.720 1 132 1.6E-36 T 28-03-2018 RK98_RS05205 f38499cf83ff7a20472318fbc025a3fd 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 196 1.1E-8 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 RK98_RS05205 f38499cf83ff7a20472318fbc025a3fd 346 SUPERFAMILY SSF55347 132 301 4.41E-26 T 28-03-2018 RK98_RS05205 f38499cf83ff7a20472318fbc025a3fd 346 Gene3D G3DSA:3.30.360.10 133 346 1.3E-33 T 28-03-2018 RK98_RS05205 f38499cf83ff7a20472318fbc025a3fd 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 1.7E-29 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 RK98_RS05205 f38499cf83ff7a20472318fbc025a3fd 346 SUPERFAMILY SSF51735 2 181 1.89E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS06075 67e423bf64448a8a7db153861dee8f56 214 Pfam PF01925 Sulfite exporter TauE/SafE 10 212 9.8E-32 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 RK98_RS10210 e0dfed5fe543b59d42204eb76ffa8b9a 213 Pfam PF16560 Putative mobile pathogenicity island 1 213 3.2E-121 T 28-03-2018 IPR032351 Putative mobile pathogenicity island RK98_RS14185 b911d10a3ecb8ef7ab41c5693c316162 193 Gene3D G3DSA:1.20.1480.30 78 187 0.0016 T 28-03-2018 RK98_RS14185 b911d10a3ecb8ef7ab41c5693c316162 193 Gene3D G3DSA:1.10.287.540 20 61 1.9E-4 T 28-03-2018 RK98_RS05605 32061369e8c49565c14f6fc3aba60140 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 37.665 T 28-03-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 RK98_RS05605 32061369e8c49565c14f6fc3aba60140 220 Gene3D G3DSA:3.20.20.70 1 216 2.0E-96 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS05605 32061369e8c49565c14f6fc3aba60140 220 Pfam PF01791 DeoC/LacD family aldolase 7 208 4.0E-26 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RK98_RS05605 32061369e8c49565c14f6fc3aba60140 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 4 212 6.4E-87 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RK98_RS05605 32061369e8c49565c14f6fc3aba60140 220 SUPERFAMILY SSF51569 2 213 7.01E-83 T 28-03-2018 RK98_RS05605 32061369e8c49565c14f6fc3aba60140 220 SMART SM01133 2 213 2.5E-98 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RK98_RS05605 32061369e8c49565c14f6fc3aba60140 220 PIRSF PIRSF001357 1 219 1.5E-78 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 RK98_RS00375 883542b236949aed16fce9ddb8729e98 187 Pfam PF06962 Putative rRNA methylase 47 184 1.5E-48 T 28-03-2018 IPR010719 Putative rRNA methylase RK98_RS00375 883542b236949aed16fce9ddb8729e98 187 Gene3D G3DSA:3.40.50.150 4 187 5.9E-20 T 28-03-2018 RK98_RS00375 883542b236949aed16fce9ddb8729e98 187 SUPERFAMILY SSF53335 15 185 8.59E-23 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS08105 204a691082f98d11f38d9e76ee8a2d83 104 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 6 102 1.0E-23 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 RK98_RS08105 204a691082f98d11f38d9e76ee8a2d83 104 Pfam PF13806 Rieske-like [2Fe-2S] domain 8 102 4.9E-18 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 RK98_RS08105 204a691082f98d11f38d9e76ee8a2d83 104 Gene3D G3DSA:2.102.10.10 3 104 7.3E-24 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RK98_RS08105 204a691082f98d11f38d9e76ee8a2d83 104 SUPERFAMILY SSF50022 6 104 4.71E-31 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 RK98_RS01120 e2b4b6254000afb02036d0b2b0250f31 180 Gene3D G3DSA:2.40.380.10 17 174 1.8E-33 T 28-03-2018 IPR007295 Domain of unknown function DUF402 RK98_RS01120 e2b4b6254000afb02036d0b2b0250f31 180 PIRSF PIRSF028345 4 180 2.6E-79 T 28-03-2018 IPR016882 Uncharacterised protein family UPF0374 RK98_RS01120 e2b4b6254000afb02036d0b2b0250f31 180 Pfam PF04167 Protein of unknown function (DUF402) 63 127 7.9E-18 T 28-03-2018 IPR007295 Domain of unknown function DUF402 RK98_RS01120 e2b4b6254000afb02036d0b2b0250f31 180 SUPERFAMILY SSF159234 7 173 1.57E-32 T 28-03-2018 IPR007295 Domain of unknown function DUF402 RK98_RS01120 e2b4b6254000afb02036d0b2b0250f31 180 Hamap MF_01568 UPF0374 protein . 4 178 51.051 T 28-03-2018 IPR016882 Uncharacterised protein family UPF0374 RK98_RS11780 a1b8e77bc9d628bc2cbe886788401305 183 PRINTS PR01576 Peptide deformylase signature 122 140 1.7E-30 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS11780 a1b8e77bc9d628bc2cbe886788401305 183 PRINTS PR01576 Peptide deformylase signature 141 170 1.7E-30 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS11780 a1b8e77bc9d628bc2cbe886788401305 183 PRINTS PR01576 Peptide deformylase signature 109 120 1.7E-30 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS11780 a1b8e77bc9d628bc2cbe886788401305 183 PRINTS PR01576 Peptide deformylase signature 47 76 1.7E-30 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS11780 a1b8e77bc9d628bc2cbe886788401305 183 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 176 2.2E-45 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS11780 a1b8e77bc9d628bc2cbe886788401305 183 Pfam PF01327 Polypeptide deformylase 4 172 6.7E-44 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS11780 a1b8e77bc9d628bc2cbe886788401305 183 Hamap MF_00163 Peptide deformylase [def]. 3 183 27.275 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS11780 a1b8e77bc9d628bc2cbe886788401305 183 PIRSF PIRSF004749 2 182 2.4E-46 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS11780 a1b8e77bc9d628bc2cbe886788401305 183 Gene3D G3DSA:3.90.45.10 3 182 1.6E-52 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS11780 a1b8e77bc9d628bc2cbe886788401305 183 SUPERFAMILY SSF56420 2 179 5.76E-58 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS06600 44388f793ffbf3c4f2749f16335f12d7 158 Gene3D G3DSA:3.30.1060.10 1 157 9.5E-36 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS06600 44388f793ffbf3c4f2749f16335f12d7 158 SUPERFAMILY SSF55068 3 151 2.35E-41 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS06600 44388f793ffbf3c4f2749f16335f12d7 158 Pfam PF01625 Peptide methionine sulfoxide reductase 4 143 3.2E-37 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS00110 e39acdfeb17aabf3f9d958952ccea8df 382 Gene3D G3DSA:3.90.1150.10 253 366 2.7E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS00110 e39acdfeb17aabf3f9d958952ccea8df 382 SUPERFAMILY SSF53383 4 374 9.9E-89 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS00110 e39acdfeb17aabf3f9d958952ccea8df 382 Gene3D G3DSA:3.40.640.10 16 252 1.9E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS00110 e39acdfeb17aabf3f9d958952ccea8df 382 PIRSF PIRSF005572 3 381 8.7E-104 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 RK98_RS00110 e39acdfeb17aabf3f9d958952ccea8df 382 Pfam PF00266 Aminotransferase class-V 5 366 8.9E-70 T 28-03-2018 IPR000192 Aminotransferase class V domain RK98_RS03145 ce172b0f315b4cb6d2d3cfa7273b9f06 379 SUPERFAMILY SSF53901 266 378 6.81E-26 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS03145 ce172b0f315b4cb6d2d3cfa7273b9f06 379 PIRSF PIRSF000429 1 379 1.9E-101 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 RK98_RS03145 ce172b0f315b4cb6d2d3cfa7273b9f06 379 ProSitePatterns PS00737 Thiolases signature 2. 328 344 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 RK98_RS03145 ce172b0f315b4cb6d2d3cfa7273b9f06 379 Gene3D G3DSA:3.40.47.10 256 379 6.3E-19 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS03145 ce172b0f315b4cb6d2d3cfa7273b9f06 379 Gene3D G3DSA:3.40.47.10 1 255 6.2E-37 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS03145 ce172b0f315b4cb6d2d3cfa7273b9f06 379 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 376 2.4E-115 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 RK98_RS03145 ce172b0f315b4cb6d2d3cfa7273b9f06 379 SUPERFAMILY SSF53901 1 254 2.88E-54 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS03145 ce172b0f315b4cb6d2d3cfa7273b9f06 379 Pfam PF02803 Thiolase, C-terminal domain 268 377 5.5E-30 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 RK98_RS03145 ce172b0f315b4cb6d2d3cfa7273b9f06 379 Pfam PF00108 Thiolase, N-terminal domain 5 251 3.1E-56 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 RK98_RS06140 66d5be7c064f414d835e5354f6cb117c 129 SUPERFAMILY SSF53901 6 127 1.66E-35 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS06140 66d5be7c064f414d835e5354f6cb117c 129 Gene3D G3DSA:3.40.47.10 2 60 3.2E-16 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 RK98_RS06140 66d5be7c064f414d835e5354f6cb117c 129 Pfam PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal 6 120 3.2E-13 T 28-03-2018 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain GO:0004421|GO:0008299 KEGG: 00072+2.3.3.10|KEGG: 00280+2.3.3.10|KEGG: 00650+2.3.3.10|KEGG: 00900+2.3.3.10|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7571|MetaCyc: PWY-922|Reactome: R-HSA-1989781 RK98_RS06605 5aa4bd69e8b1340ca4310cedd9ee4f8c 203 SUPERFAMILY SSF50475 2 197 1.03E-42 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 RK98_RS06605 5aa4bd69e8b1340ca4310cedd9ee4f8c 203 Pfam PF01613 Flavin reductase like domain 23 165 6.8E-20 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 RK98_RS06605 5aa4bd69e8b1340ca4310cedd9ee4f8c 203 Gene3D G3DSA:2.30.110.10 10 191 4.2E-45 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 RK98_RS06605 5aa4bd69e8b1340ca4310cedd9ee4f8c 203 SMART SM00903 20 169 2.8E-18 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 RK98_RS04125 6f9c432a25376db652dc5f31e61e1060 597 Gene3D G3DSA:3.40.50.300 2 268 4.8E-36 T 28-03-2018 RK98_RS04125 6f9c432a25376db652dc5f31e61e1060 597 Gene3D G3DSA:3.40.50.300 269 596 1.1E-26 T 28-03-2018 RK98_RS04125 6f9c432a25376db652dc5f31e61e1060 597 SUPERFAMILY SSF52540 1 574 4.6E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04125 6f9c432a25376db652dc5f31e61e1060 597 Pfam PF13245 AAA domain 22 247 8.1E-25 T 28-03-2018 RK98_RS04125 6f9c432a25376db652dc5f31e61e1060 597 Pfam PF13361 UvrD-like helicase C-terminal domain 484 568 1.7E-11 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 RK98_RS02995 10cbe43216ee5da6153a5da8011088f2 431 Gene3D G3DSA:1.10.3210.10 12 314 3.1E-77 T 28-03-2018 RK98_RS02995 10cbe43216ee5da6153a5da8011088f2 431 SUPERFAMILY SSF109604 8 417 1.72E-109 T 28-03-2018 RK98_RS02995 10cbe43216ee5da6153a5da8011088f2 431 SMART SM00471 59 189 2.1E-11 T 28-03-2018 IPR003607 HD/PDEase domain RK98_RS02995 10cbe43216ee5da6153a5da8011088f2 431 Pfam PF01966 HD domain 63 183 2.0E-15 T 28-03-2018 IPR006674 HD domain RK98_RS11850 52a705d57cacde34a5c45e3bbeb8b1da 450 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 32 413 4.6E-116 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS11850 52a705d57cacde34a5c45e3bbeb8b1da 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 112 138 5.9E-64 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS11850 52a705d57cacde34a5c45e3bbeb8b1da 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 389 408 5.9E-64 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS11850 52a705d57cacde34a5c45e3bbeb8b1da 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 165 186 5.9E-64 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS11850 52a705d57cacde34a5c45e3bbeb8b1da 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 327 346 5.9E-64 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS11850 52a705d57cacde34a5c45e3bbeb8b1da 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 355 372 5.9E-64 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS11850 52a705d57cacde34a5c45e3bbeb8b1da 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 140 159 5.9E-64 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS11850 52a705d57cacde34a5c45e3bbeb8b1da 450 PRINTS PR00447 Natural resistance-associated macrophage protein signature 217 240 5.9E-64 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS11850 52a705d57cacde34a5c45e3bbeb8b1da 450 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 24 445 40.697 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS11850 52a705d57cacde34a5c45e3bbeb8b1da 450 Pfam PF01566 Natural resistance-associated macrophage protein 53 419 5.4E-121 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS12535 37ce4a87e05491a00fead9481709e023 190 Pfam PF03061 Thioesterase superfamily 113 169 4.3E-5 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 RK98_RS12535 37ce4a87e05491a00fead9481709e023 190 PIRSF PIRSF037733 5 190 7.4E-81 T 28-03-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 RK98_RS12535 37ce4a87e05491a00fead9481709e023 190 Gene3D G3DSA:1.10.10.10 6 64 2.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS12535 37ce4a87e05491a00fead9481709e023 190 Gene3D G3DSA:3.10.129.10 65 190 2.4E-18 T 28-03-2018 RK98_RS12535 37ce4a87e05491a00fead9481709e023 190 SUPERFAMILY SSF54637 78 184 4.39E-20 T 28-03-2018 IPR029069 HotDog domain RK98_RS12535 37ce4a87e05491a00fead9481709e023 190 Hamap MF_01814 Transcription factor FapR [fapR]. 6 190 36.933 T 28-03-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 SUPERFAMILY SSF52374 4 158 1.55E-43 T 28-03-2018 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 Gene3D G3DSA:3.40.50.620 1 160 4.4E-37 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 5 65 6.2E-16 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 5 159 2.7E-62 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 Pfam PF01467 Cytidylyltransferase-like 8 135 1.4E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 8.2E-51 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 8.2E-51 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 8.2E-51 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 8.2E-51 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 8.2E-51 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 35.972 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 RK98_RS11950 0968cec3319902a30f023e72c287e60c 160 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 5 77 5.0E-5 T 28-03-2018 RK98_RS05775 a94217571ddf999f093ce28539446132 290 Pfam PF00892 EamA-like transporter family 151 285 2.7E-22 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 RK98_RS05775 a94217571ddf999f093ce28539446132 290 Pfam PF00892 EamA-like transporter family 12 139 5.0E-23 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 RK98_RS05775 a94217571ddf999f093ce28539446132 290 SUPERFAMILY SSF103481 209 286 4.97E-11 T 28-03-2018 RK98_RS05775 a94217571ddf999f093ce28539446132 290 SUPERFAMILY SSF103481 41 142 7.85E-18 T 28-03-2018 RK98_RS10160 306c1b396585f86a34c2c8d35b782295 390 Pfam PF14657 Arm DNA-binding domain 10 54 4.1E-9 T 28-03-2018 IPR028259 AP2-like integrase, N-terminal domain RK98_RS10160 306c1b396585f86a34c2c8d35b782295 390 Gene3D G3DSA:1.10.150.130 58 172 8.8E-18 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS10160 306c1b396585f86a34c2c8d35b782295 390 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 63 118 1.4E-10 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RK98_RS10160 306c1b396585f86a34c2c8d35b782295 390 SUPERFAMILY SSF56349 63 374 1.38E-60 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS10160 306c1b396585f86a34c2c8d35b782295 390 Gene3D G3DSA:1.10.443.10 173 384 1.3E-37 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS10160 306c1b396585f86a34c2c8d35b782295 390 Pfam PF00589 Phage integrase family 175 367 4.9E-29 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS01760 7bf3cd30c31afd9ca1e4d72a1c60d242 134 Gene3D G3DSA:3.30.1330.70 1 134 7.0E-25 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RK98_RS01760 7bf3cd30c31afd9ca1e4d72a1c60d242 134 Pfam PF05866 Endodeoxyribonuclease RusA 13 132 1.2E-31 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RK98_RS01760 7bf3cd30c31afd9ca1e4d72a1c60d242 134 SUPERFAMILY SSF103084 1 134 7.19E-30 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 RK98_RS08490 7cfb5ec3cbc5c7b40c7d7db97118c200 293 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 185 213 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RK98_RS08490 7cfb5ec3cbc5c7b40c7d7db97118c200 293 Gene3D G3DSA:3.40.50.720 1 293 1.3E-66 T 28-03-2018 RK98_RS08490 7cfb5ec3cbc5c7b40c7d7db97118c200 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 236 8.7E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS08490 7cfb5ec3cbc5c7b40c7d7db97118c200 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 188 8.7E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS08490 7cfb5ec3cbc5c7b40c7d7db97118c200 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 254 274 8.7E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS08490 7cfb5ec3cbc5c7b40c7d7db97118c200 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 50 67 8.7E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS08490 7cfb5ec3cbc5c7b40c7d7db97118c200 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 217 8.7E-27 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS08490 7cfb5ec3cbc5c7b40c7d7db97118c200 293 SUPERFAMILY SSF51735 49 290 1.01E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS08490 7cfb5ec3cbc5c7b40c7d7db97118c200 293 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 58 290 3.0E-52 T 28-03-2018 RK98_RS03785 c1ad8ac6249d90d0f4ffc51979989429 546 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 532 1.2E-246 T 28-03-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 RK98_RS03785 c1ad8ac6249d90d0f4ffc51979989429 546 Gene3D G3DSA:3.20.20.80 2 253 1.8E-67 T 28-03-2018 RK98_RS03785 c1ad8ac6249d90d0f4ffc51979989429 546 Gene3D G3DSA:3.20.20.80 254 498 3.4E-62 T 28-03-2018 RK98_RS03785 c1ad8ac6249d90d0f4ffc51979989429 546 SUPERFAMILY SSF51011 480 542 1.08E-8 T 28-03-2018 RK98_RS03785 c1ad8ac6249d90d0f4ffc51979989429 546 SUPERFAMILY SSF51445 6 472 8.92E-150 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily RK98_RS03785 c1ad8ac6249d90d0f4ffc51979989429 546 Pfam PF00128 Alpha amylase, catalytic domain 29 371 3.0E-123 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RK98_RS03785 c1ad8ac6249d90d0f4ffc51979989429 546 SMART SM00642 14 414 6.8E-162 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 RK98_RS03785 c1ad8ac6249d90d0f4ffc51979989429 546 Gene3D G3DSA:2.60.40.1180 499 544 4.2E-4 T 28-03-2018 RK98_RS00380 a8bb9c854ec261a34bf2755945502242 133 Gene3D G3DSA:1.10.10.10 1 128 1.1E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS00380 a8bb9c854ec261a34bf2755945502242 133 PIRSF PIRSF032474 1 133 3.9E-91 T 28-03-2018 IPR016998 HTH-type transcriptional regulator Rot GO:0003700 RK98_RS00380 a8bb9c854ec261a34bf2755945502242 133 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 15 116 3.4E-22 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS00380 a8bb9c854ec261a34bf2755945502242 133 Pfam PF01047 MarR family 36 93 7.2E-8 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS00380 a8bb9c854ec261a34bf2755945502242 133 SMART SM00347 28 124 0.0026 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS00380 a8bb9c854ec261a34bf2755945502242 133 SUPERFAMILY SSF46785 13 118 1.89E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 221 242 2.0E-28 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.0E-28 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.0E-28 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 190 208 2.0E-28 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 465 9.1E-179 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 312 3.6E-132 T 28-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 Gene3D G3DSA:3.40.50.620 1 304 4.2E-91 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 466 38.068 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 SMART SM00840 351 416 4.1E-14 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 Pfam PF09190 DALR domain 351 412 1.5E-14 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 SUPERFAMILY SSF52374 2 312 2.47E-103 T 28-03-2018 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 Gene3D G3DSA:1.20.120.640 306 406 3.4E-15 T 28-03-2018 RK98_RS03390 e87a9f8e73d5ae6903d20d42279e94d0 466 SUPERFAMILY SSF47323 338 465 2.22E-31 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS05395 2e54c1cfc739d32f3fe5e16d45a70218 159 Pfam PF07274 Protein of unknown function (DUF1440) 13 147 1.5E-58 T 28-03-2018 IPR009898 Protein of unknown function DUF1440 RK98_RS10630 339e75532bd17b4ca271000d909d024e 61 Pfam PF11310 Protein of unknown function (DUF3113) 1 60 6.2E-33 T 28-03-2018 IPR021461 Protein of unknown function DUF3113 RK98_RS02650 f39ae0b1063bc99847f66c8d3cfca30f 157 SUPERFAMILY SSF51182 1 155 3.56E-57 T 28-03-2018 IPR011051 RmlC-like cupin domain RK98_RS02650 f39ae0b1063bc99847f66c8d3cfca30f 157 Pfam PF06172 Cupin superfamily (DUF985) 5 134 8.9E-44 T 28-03-2018 IPR009327 Cupin domain of unknown function DUF985 RK98_RS02650 f39ae0b1063bc99847f66c8d3cfca30f 157 Gene3D G3DSA:2.60.120.10 1 156 3.2E-56 T 28-03-2018 IPR014710 RmlC-like jelly roll fold RK98_RS12540 3c774b84ba9bc55ce66c65bff4d4b4e9 328 SUPERFAMILY SSF53659 1 324 1.07E-101 T 28-03-2018 RK98_RS12540 3c774b84ba9bc55ce66c65bff4d4b4e9 328 PIRSF PIRSF002465 1 328 3.8E-127 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 RK98_RS12540 3c774b84ba9bc55ce66c65bff4d4b4e9 328 Gene3D G3DSA:3.40.718.10 1 328 8.0E-105 T 28-03-2018 RK98_RS12540 3c774b84ba9bc55ce66c65bff4d4b4e9 328 Pfam PF02504 Fatty acid synthesis protein 2 316 1.6E-110 T 28-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 RK98_RS12540 3c774b84ba9bc55ce66c65bff4d4b4e9 328 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 328 143.49 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 RK98_RS12540 3c774b84ba9bc55ce66c65bff4d4b4e9 328 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 3 325 4.5E-122 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 RK98_RS14880 de1256f30a33de5a3c0ed1d03efb3837 186 Pfam PF03352 Methyladenine glycosylase 8 180 3.8E-63 T 28-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 RK98_RS14880 de1256f30a33de5a3c0ed1d03efb3837 186 Gene3D G3DSA:1.10.340.30 1 182 2.9E-64 T 28-03-2018 RK98_RS14880 de1256f30a33de5a3c0ed1d03efb3837 186 SUPERFAMILY SSF48150 2 183 2.28E-66 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 RK98_RS14020 a89c8b5bf30b88b34ea80eb4db558b97 180 ProSitePatterns PS00893 Nudix box signature. 76 97 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RK98_RS14020 a89c8b5bf30b88b34ea80eb4db558b97 180 Pfam PF00293 NUDIX domain 43 156 1.7E-18 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RK98_RS14020 a89c8b5bf30b88b34ea80eb4db558b97 180 SUPERFAMILY SSF55811 6 176 2.3E-49 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 RK98_RS14020 a89c8b5bf30b88b34ea80eb4db558b97 180 Gene3D G3DSA:3.90.79.10 3 180 1.6E-40 T 28-03-2018 RK98_RS10450 016a010c691f98f908c6bd661a07dea0 273 SUPERFAMILY SSF53850 32 272 8.08E-77 T 28-03-2018 RK98_RS10450 016a010c691f98f908c6bd661a07dea0 273 PIRSF PIRSF002854 1 273 1.0E-94 T 28-03-2018 IPR004872 Lipoprotein NlpA family RK98_RS10450 016a010c691f98f908c6bd661a07dea0 273 Gene3D G3DSA:3.40.190.10 127 272 5.1E-44 T 28-03-2018 RK98_RS10450 016a010c691f98f908c6bd661a07dea0 273 Pfam PF03180 NLPA lipoprotein 33 272 3.6E-87 T 28-03-2018 IPR004872 Lipoprotein NlpA family RK98_RS10450 016a010c691f98f908c6bd661a07dea0 273 Gene3D G3DSA:3.40.190.10 29 126 7.7E-27 T 28-03-2018 RK98_RS11290 1266e8a5c7bacb688ca7f06695abc64f 602 Gene3D G3DSA:1.10.1370.10 80 599 1.5E-43 T 28-03-2018 RK98_RS11290 1266e8a5c7bacb688ca7f06695abc64f 602 SUPERFAMILY SSF55486 12 585 1.17E-121 T 28-03-2018 RK98_RS11290 1266e8a5c7bacb688ca7f06695abc64f 602 Pfam PF08439 Oligopeptidase F 117 186 1.7E-19 T 28-03-2018 IPR013647 Oligopeptidase F, N-terminal domain RK98_RS11290 1266e8a5c7bacb688ca7f06695abc64f 602 Pfam PF01432 Peptidase family M3 207 587 9.8E-76 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 RK98_RS11290 1266e8a5c7bacb688ca7f06695abc64f 602 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 15 598 9.9E-202 T 28-03-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 RK98_RS01715 f95a19ff9b54bc86dc1c94b095c3b6b0 66 Pfam PF07438 Protein of unknown function (DUF1514) 1 42 6.7E-8 T 28-03-2018 IPR009999 Protein of unknown function DUF1514 RK98_RS10770 406a7cd7c8c6b1c6bec289c3c71991f3 1154 Gene3D G3DSA:1.20.120.20 326 550 1.9E-4 T 28-03-2018 RK98_RS10770 406a7cd7c8c6b1c6bec289c3c71991f3 1154 SUPERFAMILY SSF48371 731 1015 3.77E-9 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 RK98_RS10770 406a7cd7c8c6b1c6bec289c3c71991f3 1154 Gene3D G3DSA:1.20.120.20 932 1114 5.4E-13 T 28-03-2018 RK98_RS10770 406a7cd7c8c6b1c6bec289c3c71991f3 1154 Gene3D G3DSA:1.20.120.20 786 931 2.6E-16 T 28-03-2018 RK98_RS10770 406a7cd7c8c6b1c6bec289c3c71991f3 1154 Gene3D G3DSA:1.20.1480.30 722 785 2.6E-5 T 28-03-2018 RK98_RS10770 406a7cd7c8c6b1c6bec289c3c71991f3 1154 Gene3D G3DSA:1.20.1170.10 4 249 3.3E-4 T 28-03-2018 RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 PRINTS PR01898 Bacterial superantigen superfamily signature 90 116 3.1E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 PRINTS PR01898 Bacterial superantigen superfamily signature 231 247 3.1E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 PRINTS PR01898 Bacterial superantigen superfamily signature 124 137 3.1E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 PRINTS PR01898 Bacterial superantigen superfamily signature 165 178 3.1E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 PRINTS PR01898 Bacterial superantigen superfamily signature 178 192 3.1E-28 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 PRINTS PR00279 Bacterial toxin signature 165 181 1.0E-7 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 PRINTS PR00279 Bacterial toxin signature 126 138 1.0E-7 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 Gene3D G3DSA:3.10.20.120 129 248 5.5E-35 T 28-03-2018 RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 145 248 7.0E-24 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 165 188 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 SUPERFAMILY SSF50203 27 140 6.35E-33 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 Gene3D G3DSA:2.40.50.110 57 128 9.1E-29 T 28-03-2018 RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 SUPERFAMILY SSF54334 136 249 7.33E-32 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS00695 957e325c67ad4b312de7a877ae2b396c 251 Pfam PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain 49 132 1.9E-9 T 28-03-2018 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold GO:0009405 RK98_RS11665 f91aedbc09a7ff954d2bfff8db99052c 494 PIRSF PIRSF000485 7 472 4.6E-166 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RK98_RS11665 f91aedbc09a7ff954d2bfff8db99052c 494 SUPERFAMILY SSF56235 11 235 1.46E-63 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS11665 f91aedbc09a7ff954d2bfff8db99052c 494 Gene3D G3DSA:3.60.20.10 151 241 5.1E-22 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS11665 f91aedbc09a7ff954d2bfff8db99052c 494 Gene3D G3DSA:3.60.20.10 12 150 2.2E-31 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS11665 f91aedbc09a7ff954d2bfff8db99052c 494 Gene3D G3DSA:3.40.50.2020 242 438 3.4E-33 T 28-03-2018 RK98_RS11665 f91aedbc09a7ff954d2bfff8db99052c 494 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 11 457 5.4E-146 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RK98_RS11665 f91aedbc09a7ff954d2bfff8db99052c 494 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 10 456 44.1 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 RK98_RS11665 f91aedbc09a7ff954d2bfff8db99052c 494 Pfam PF13537 Glutamine amidotransferase domain 93 209 7.5E-20 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain RK98_RS11665 f91aedbc09a7ff954d2bfff8db99052c 494 Pfam PF00156 Phosphoribosyl transferase domain 268 382 3.7E-10 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RK98_RS11665 f91aedbc09a7ff954d2bfff8db99052c 494 SUPERFAMILY SSF53271 249 464 3.28E-68 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like RK98_RS09755 02ed9bc4e3d76645fe4c5e169214946b 229 Gene3D G3DSA:1.20.910.10 1 225 7.4E-37 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 RK98_RS09755 02ed9bc4e3d76645fe4c5e169214946b 229 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 217 8.1E-94 T 28-03-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 RK98_RS09755 02ed9bc4e3d76645fe4c5e169214946b 229 Pfam PF03070 TENA/THI-4/PQQC family 9 217 2.8E-40 T 28-03-2018 IPR004305 Thiaminase-2/PQQC RK98_RS09755 02ed9bc4e3d76645fe4c5e169214946b 229 SUPERFAMILY SSF48613 2 224 9.94E-53 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 RK98_RS04195 30125a00bb33ea05c995c5fb0288895f 340 Pfam PF13702 Lysozyme-like 49 204 6.9E-60 T 28-03-2018 RK98_RS04195 30125a00bb33ea05c995c5fb0288895f 340 Gene3D G3DSA:1.10.530.10 48 207 3.3E-11 T 28-03-2018 RK98_RS04195 30125a00bb33ea05c995c5fb0288895f 340 Pfam PF00877 NlpC/P60 family 230 336 1.3E-27 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain RK98_RS04195 30125a00bb33ea05c995c5fb0288895f 340 Gene3D G3DSA:3.90.1720.10 208 340 1.4E-36 T 28-03-2018 RK98_RS04195 30125a00bb33ea05c995c5fb0288895f 340 SUPERFAMILY SSF53955 55 155 5.62E-9 T 28-03-2018 IPR023346 Lysozyme-like domain RK98_RS04195 30125a00bb33ea05c995c5fb0288895f 340 SUPERFAMILY SSF54001 215 338 1.91E-38 T 28-03-2018 RK98_RS04645 3375c388a3f5877b5ac1d9e3498e4165 275 Gene3D G3DSA:3.40.50.1820 1 275 3.2E-40 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS04645 3375c388a3f5877b5ac1d9e3498e4165 275 Pfam PF07859 alpha/beta hydrolase fold 32 142 4.6E-9 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RK98_RS04645 3375c388a3f5877b5ac1d9e3498e4165 275 SUPERFAMILY SSF53474 8 132 1.61E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS04645 3375c388a3f5877b5ac1d9e3498e4165 275 SUPERFAMILY SSF53474 179 270 1.61E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 Gene3D G3DSA:3.30.870.10 119 299 2.3E-34 T 28-03-2018 RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 SMART SM00155 228 255 4.5E-6 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 SMART SM00155 406 433 6.5E-6 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 SUPERFAMILY SSF56024 109 322 2.79E-49 T 28-03-2018 RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 67 1.2E-11 T 28-03-2018 IPR027379 Cardiolipin synthase N-terminal RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 SUPERFAMILY SSF56024 279 479 3.14E-51 T 28-03-2018 RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 Hamap MF_01916 Cardiolipin synthase. 18 493 41.592 T 28-03-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 Gene3D G3DSA:3.30.870.10 300 479 4.7E-30 T 28-03-2018 RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 11 493 1.2E-247 T 28-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 Pfam PF13091 PLD-like domain 147 287 3.5E-14 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 RK98_RS13035 8b0bf006ac04401e8aec0f6dcf358b8c 493 Pfam PF13091 PLD-like domain 335 459 5.0E-26 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 RK98_RS03595 5ece5155d6fe0061741d03e4d7b2b2e4 508 Pfam PF01943 Polysaccharide biosynthesis protein 8 291 1.2E-27 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RK98_RS03595 5ece5155d6fe0061741d03e4d7b2b2e4 508 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 343 484 8.9E-20 T 28-03-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain RK98_RS10190 2bbb0dff287c64845d4d0d2b855ca740 108 Pfam PF07342 Protein of unknown function (DUF1474) 1 100 8.2E-26 T 28-03-2018 IPR009942 Protein of unknown function DUF1474 RK98_RS03300 e9c48b4e74c7043d4248a5c0a9d8fcbf 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.3E-67 T 28-03-2018 IPR023798 Ribosomal protein S7 domain RK98_RS03300 e9c48b4e74c7043d4248a5c0a9d8fcbf 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 2.3E-69 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RK98_RS03300 e9c48b4e74c7043d4248a5c0a9d8fcbf 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 28-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS03300 e9c48b4e74c7043d4248a5c0a9d8fcbf 156 Gene3D G3DSA:1.10.455.10 6 156 2.0E-59 T 28-03-2018 IPR023798 Ribosomal protein S7 domain RK98_RS03300 e9c48b4e74c7043d4248a5c0a9d8fcbf 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.156 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 RK98_RS03300 e9c48b4e74c7043d4248a5c0a9d8fcbf 156 PIRSF PIRSF002122 3 156 2.5E-58 T 28-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 RK98_RS03300 e9c48b4e74c7043d4248a5c0a9d8fcbf 156 SUPERFAMILY SSF47973 4 149 7.59E-61 T 28-03-2018 IPR023798 Ribosomal protein S7 domain RK98_RS10895 43e94f9ed494b10c01ad182ddd55e5e9 275 Pfam PF01925 Sulfite exporter TauE/SafE 9 269 7.0E-51 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 RK98_RS06685 5d89051b1330780ed8022c76bc4a20a0 993 Gene3D G3DSA:3.40.1710.10 48 216 2.8E-23 T 28-03-2018 RK98_RS06685 5d89051b1330780ed8022c76bc4a20a0 993 Pfam PF12698 ABC-2 family transporter protein 617 969 1.2E-12 T 28-03-2018 RK98_RS06685 5d89051b1330780ed8022c76bc4a20a0 993 Pfam PF12051 Protein of unknown function (DUF3533) 42 179 4.6E-7 T 28-03-2018 IPR022703 Domain of unknown function DUF3533 RK98_RS06685 5d89051b1330780ed8022c76bc4a20a0 993 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 771 971 1.0E-49 T 28-03-2018 IPR017501 Phage infection protein, YhgE, C-terminal RK98_RS06685 5d89051b1330780ed8022c76bc4a20a0 993 Gene3D G3DSA:1.20.1480.30 558 653 2.5E-4 T 28-03-2018 RK98_RS06685 5d89051b1330780ed8022c76bc4a20a0 993 Gene3D G3DSA:1.20.120.570 654 774 0.17 T 28-03-2018 RK98_RS06685 5d89051b1330780ed8022c76bc4a20a0 993 Gene3D G3DSA:1.20.120.570 221 367 0.0033 T 28-03-2018 RK98_RS06685 5d89051b1330780ed8022c76bc4a20a0 993 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 172 1.3E-46 T 28-03-2018 IPR017500 Phage infection protein, YhgE, N-terminal RK98_RS04880 664cbe8c8db4a7ac5528f58ae5063ba6 316 Pfam PF01551 Peptidase family M23 209 303 3.8E-27 T 28-03-2018 IPR016047 Peptidase M23 RK98_RS04880 664cbe8c8db4a7ac5528f58ae5063ba6 316 Gene3D G3DSA:2.70.70.10 15 316 3.8E-36 T 28-03-2018 RK98_RS04880 664cbe8c8db4a7ac5528f58ae5063ba6 316 SUPERFAMILY SSF51261 48 313 4.71E-53 T 28-03-2018 IPR011055 Duplicated hybrid motif RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 SUPERFAMILY SSF161093 285 457 4.58E-50 T 28-03-2018 RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 Pfam PF00571 CBS domain 209 263 1.3E-8 T 28-03-2018 IPR000644 CBS domain RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 Pfam PF00571 CBS domain 146 203 1.8E-9 T 28-03-2018 IPR000644 CBS domain RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 SMART SM00924 40 145 3.7E-25 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 SMART SM00116 152 205 0.063 T 28-03-2018 IPR000644 CBS domain RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 SMART SM00116 216 264 2.0E-6 T 28-03-2018 IPR000644 CBS domain RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 SUPERFAMILY SSF54631 144 281 2.02E-34 T 28-03-2018 RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 Gene3D G3DSA:3.10.580.10 137 279 1.2E-24 T 28-03-2018 RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 TIGRFAM TIGR00400 mgtE: magnesium transporter 17 458 4.5E-122 T 28-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 Gene3D G3DSA:1.25.60.10 5 136 6.5E-21 T 28-03-2018 RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 Gene3D G3DSA:1.10.357.20 285 460 3.4E-39 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 Pfam PF03448 MgtE intracellular N domain 40 143 9.7E-24 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 Pfam PF01769 Divalent cation transporter 329 450 8.1E-28 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 RK98_RS11330 ce7c0af39b9f86e580474b4604aecab8 461 SUPERFAMILY SSF158791 20 142 4.05E-27 T 28-03-2018 RK98_RS08290 20239cb612427b2f3a810932b6bfa4bb 151 Pfam PF11457 Protein of unknown function (DUF3021) 1 147 6.5E-35 T 28-03-2018 IPR021560 Protein of unknown function DUF3021 RK98_RS08935 d99b4be7491c2a033f184a176b50c348 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.2E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08935 d99b4be7491c2a033f184a176b50c348 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.2E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08935 d99b4be7491c2a033f184a176b50c348 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.2E-24 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08935 d99b4be7491c2a033f184a176b50c348 92 Pfam PF00203 Ribosomal protein S19 3 83 1.1E-37 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08935 d99b4be7491c2a033f184a176b50c348 92 SUPERFAMILY SSF54570 3 83 1.7E-35 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08935 d99b4be7491c2a033f184a176b50c348 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.615 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08935 d99b4be7491c2a033f184a176b50c348 92 PIRSF PIRSF002144 1 92 7.3E-33 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08935 d99b4be7491c2a033f184a176b50c348 92 Gene3D G3DSA:3.30.860.10 1 92 3.7E-41 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08935 d99b4be7491c2a033f184a176b50c348 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 4.5E-48 T 28-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 RK98_RS08935 d99b4be7491c2a033f184a176b50c348 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 28-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 SUPERFAMILY SSF48557 3 428 9.27E-141 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 SMART SM00998 349 429 3.4E-40 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 427 2.8E-175 T 28-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 Pfam PF00206 Lyase 7 286 4.0E-75 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 2.9E-26 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.9E-26 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 2.9E-26 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 2.9E-26 T 28-03-2018 IPR000362 Fumarate lyase family RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 Gene3D G3DSA:1.20.200.10 93 348 1.3E-81 T 28-03-2018 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 Gene3D G3DSA:1.10.275.10 2 92 6.5E-24 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 6.1E-9 T 28-03-2018 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 6.1E-9 T 28-03-2018 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 6.1E-9 T 28-03-2018 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 6.1E-9 T 28-03-2018 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 1.1E-25 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 Gene3D G3DSA:1.10.40.30 349 428 9.0E-28 T 28-03-2018 RK98_RS01355 f9b77fee997dc256e0d2616dd6b3f2c6 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 RK98_RS02460 c0c0db9ebe8c24eeb2c6f2b6c7525ae9 157 Pfam PF07681 DoxX 10 103 1.9E-8 T 28-03-2018 IPR032808 DoxX family RK98_RS08485 5292ed811fa8aef80a38844601d14209 373 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 8 357 1.5E-125 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 RK98_RS08485 5292ed811fa8aef80a38844601d14209 373 PIRSF PIRSF005962 1 373 3.6E-109 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 RK98_RS08485 5292ed811fa8aef80a38844601d14209 373 SUPERFAMILY SSF55031 173 283 7.59E-30 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS08485 5292ed811fa8aef80a38844601d14209 373 Gene3D G3DSA:3.40.630.10 2 231 7.9E-40 T 28-03-2018 RK98_RS08485 5292ed811fa8aef80a38844601d14209 373 Gene3D G3DSA:3.40.630.10 232 373 8.5E-16 T 28-03-2018 RK98_RS08485 5292ed811fa8aef80a38844601d14209 373 SUPERFAMILY SSF53187 3 187 1.89E-70 T 28-03-2018 RK98_RS08485 5292ed811fa8aef80a38844601d14209 373 SUPERFAMILY SSF53187 288 371 1.89E-70 T 28-03-2018 RK98_RS08485 5292ed811fa8aef80a38844601d14209 373 Pfam PF01546 Peptidase family M20/M25/M40 63 368 1.1E-28 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RK98_RS08485 5292ed811fa8aef80a38844601d14209 373 Pfam PF07687 Peptidase dimerisation domain 175 272 6.2E-9 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS13585 833dfc069e91440c37b7c8bc550e952e 356 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 144 1.2E-37 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RK98_RS13585 833dfc069e91440c37b7c8bc550e952e 356 Gene3D G3DSA:3.40.50.2000 2 188 1.2E-31 T 28-03-2018 RK98_RS13585 833dfc069e91440c37b7c8bc550e952e 356 Gene3D G3DSA:3.40.50.2000 189 341 8.4E-24 T 28-03-2018 RK98_RS13585 833dfc069e91440c37b7c8bc550e952e 356 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 337 8.8E-27 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 RK98_RS13585 833dfc069e91440c37b7c8bc550e952e 356 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 354 26.93 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 RK98_RS13585 833dfc069e91440c37b7c8bc550e952e 356 SUPERFAMILY SSF53756 3 340 2.47E-84 T 28-03-2018 RK98_RS01695 ce45783cab4bd3e4866029a0acf330b7 553 Pfam PF03354 Phage Terminase 65 533 1.2E-41 T 28-03-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type RK98_RS06915 463b6975b75329cc4d8ab5b7a7b7bf18 498 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 3 493 53.133 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 RK98_RS06915 463b6975b75329cc4d8ab5b7a7b7bf18 498 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 8 490 6.0E-191 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 RK98_RS06915 463b6975b75329cc4d8ab5b7a7b7bf18 498 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 6 493 1.8E-216 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 RK98_RS06915 463b6975b75329cc4d8ab5b7a7b7bf18 498 Gene3D G3DSA:3.50.50.60 1 442 1.2E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS06915 463b6975b75329cc4d8ab5b7a7b7bf18 498 SUPERFAMILY SSF51905 4 275 4.66E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS12870 4176926b8fa74b7318be15356c6c374e 288 SUPERFAMILY SSF52518 12 283 8.21E-78 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS12870 4176926b8fa74b7318be15356c6c374e 288 Gene3D G3DSA:3.40.50.970 73 287 6.9E-46 T 28-03-2018 RK98_RS12870 4176926b8fa74b7318be15356c6c374e 288 Gene3D G3DSA:3.40.50.970 5 72 2.0E-15 T 28-03-2018 RK98_RS12870 4176926b8fa74b7318be15356c6c374e 288 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 199 263 1.0E-21 T 28-03-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal RK98_RS12870 4176926b8fa74b7318be15356c6c374e 288 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 14 274 7.2E-98 T 28-03-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate RK98_RS12870 4176926b8fa74b7318be15356c6c374e 288 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 48 195 2.3E-32 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 RK98_RS08370 05a1661fe5f519655c3458f8a956219a 306 Pfam PF07859 alpha/beta hydrolase fold 79 279 8.2E-28 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RK98_RS08370 05a1661fe5f519655c3458f8a956219a 306 Gene3D G3DSA:3.40.50.1820 9 306 4.5E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS08370 05a1661fe5f519655c3458f8a956219a 306 SUPERFAMILY SSF53474 28 293 5.94E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS06870 11805d8e454df385bb994063bb14e76c 540 ProSitePatterns PS01303 BCCT family of transporters signature. 320 329 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 RK98_RS06870 11805d8e454df385bb994063bb14e76c 540 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 12 504 1.1E-150 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RK98_RS06870 11805d8e454df385bb994063bb14e76c 540 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 51 501 1.2E-138 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RK98_RS12285 1e132a8027782d8b1299bd14e6b8fa2f 311 Pfam PF01795 MraW methylase family 2 308 9.5E-137 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS12285 1e132a8027782d8b1299bd14e6b8fa2f 311 Gene3D G3DSA:1.10.150.170 111 216 1.9E-40 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS12285 1e132a8027782d8b1299bd14e6b8fa2f 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 308 3.0E-123 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS12285 1e132a8027782d8b1299bd14e6b8fa2f 311 PIRSF PIRSF004486 1 311 8.6E-107 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS12285 1e132a8027782d8b1299bd14e6b8fa2f 311 SUPERFAMILY SSF53335 214 308 2.0E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS12285 1e132a8027782d8b1299bd14e6b8fa2f 311 SUPERFAMILY SSF53335 3 112 2.0E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS12285 1e132a8027782d8b1299bd14e6b8fa2f 311 SUPERFAMILY SSF81799 113 214 1.57E-36 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS12285 1e132a8027782d8b1299bd14e6b8fa2f 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 37.651 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS05810 a7e5ec457e4b11cbe5b8ac0239dc69f5 256 Pfam PF04507 Csa1 family 2 254 6.5E-126 T 28-03-2018 IPR007595 Csa1 family RK98_RS05810 a7e5ec457e4b11cbe5b8ac0239dc69f5 256 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 2 252 1.2E-115 T 28-03-2018 IPR007595 Csa1 family RK98_RS09770 05f29af5759e7a9b0fa25dd51d80f729 213 SUPERFAMILY SSF51391 6 211 1.1E-66 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09770 05f29af5759e7a9b0fa25dd51d80f729 213 Pfam PF02581 Thiamine monophosphate synthase 9 194 3.8E-59 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09770 05f29af5759e7a9b0fa25dd51d80f729 213 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 206 1.4E-63 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09770 05f29af5759e7a9b0fa25dd51d80f729 213 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 7 212 27.252 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09770 05f29af5759e7a9b0fa25dd51d80f729 213 Gene3D G3DSA:3.20.20.70 1 212 3.0E-42 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS03990 7f32e4b06d614dde52c5b98640eb24e2 264 Pfam PF04507 Csa1 family 1 260 2.8E-111 T 28-03-2018 IPR007595 Csa1 family RK98_RS03990 7f32e4b06d614dde52c5b98640eb24e2 264 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 258 1.1E-105 T 28-03-2018 IPR007595 Csa1 family RK98_RS12705 4d52b55b26df27bb12900d193a027004 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 2 184 27.388 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 RK98_RS12705 4d52b55b26df27bb12900d193a027004 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 9 184 1.1E-72 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 RK98_RS12705 4d52b55b26df27bb12900d193a027004 184 Gene3D G3DSA:1.10.132.20 74 183 2.1E-36 T 28-03-2018 RK98_RS12705 4d52b55b26df27bb12900d193a027004 184 Gene3D G3DSA:1.10.132.20 1 73 1.1E-10 T 28-03-2018 RK98_RS12705 4d52b55b26df27bb12900d193a027004 184 Pfam PF01765 Ribosome recycling factor 19 182 2.4E-61 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 RK98_RS12705 4d52b55b26df27bb12900d193a027004 184 SUPERFAMILY SSF55194 2 182 4.97E-68 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 RK98_RS14150 b2cfebff1af8bc1979964d6a288c9351 445 Pfam PF02601 Exonuclease VII, large subunit 124 435 7.2E-93 T 28-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 RK98_RS14150 b2cfebff1af8bc1979964d6a288c9351 445 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 345 9.5E-132 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RK98_RS14150 b2cfebff1af8bc1979964d6a288c9351 445 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 438 27.424 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 RK98_RS14150 b2cfebff1af8bc1979964d6a288c9351 445 Pfam PF13742 OB-fold nucleic acid binding domain 5 100 2.9E-27 T 28-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 RK98_RS14150 b2cfebff1af8bc1979964d6a288c9351 445 Gene3D G3DSA:2.40.50.140 5 101 8.0E-9 T 28-03-2018 RK98_RS02300 a7f41dc0398a42d4cf5c4ea782dbaeb4 323 Pfam PF01032 FecCD transport family 13 315 2.5E-63 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RK98_RS02300 a7f41dc0398a42d4cf5c4ea782dbaeb4 323 SUPERFAMILY SSF81345 4 315 2.09E-64 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS02300 a7f41dc0398a42d4cf5c4ea782dbaeb4 323 Gene3D G3DSA:1.10.3470.10 1 323 2.4E-44 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS02700 64c0d7c177dd367ecfb69ec1326063ae 346 SMART SM00387 222 332 2.5E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS02700 64c0d7c177dd367ecfb69ec1326063ae 346 Gene3D G3DSA:3.30.565.10 137 331 2.5E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS02700 64c0d7c177dd367ecfb69ec1326063ae 346 SUPERFAMILY SSF47384 109 177 3.92E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS02700 64c0d7c177dd367ecfb69ec1326063ae 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 258 272 8.4E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS02700 64c0d7c177dd367ecfb69ec1326063ae 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 310 8.4E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS02700 64c0d7c177dd367ecfb69ec1326063ae 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 8.4E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS02700 64c0d7c177dd367ecfb69ec1326063ae 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 276 286 8.4E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS02700 64c0d7c177dd367ecfb69ec1326063ae 346 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 223 331 5.9E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS02700 64c0d7c177dd367ecfb69ec1326063ae 346 SUPERFAMILY SSF55874 180 331 1.57E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS03695 20e7d136f88a91e69dc49ff23bb65867 115 PIRSF PIRSF021439 1 115 1.2E-34 T 28-03-2018 IPR010377 Initiation control protein YabA GO:0006260 RK98_RS03695 20e7d136f88a91e69dc49ff23bb65867 115 Hamap MF_01159 Initiation-control protein YabA. 1 115 22.38 T 28-03-2018 IPR010377 Initiation control protein YabA GO:0006260 RK98_RS03695 20e7d136f88a91e69dc49ff23bb65867 115 Pfam PF06156 Initiation control protein YabA 2 111 4.4E-30 T 28-03-2018 IPR010377 Initiation control protein YabA GO:0006260 RK98_RS03695 20e7d136f88a91e69dc49ff23bb65867 115 Gene3D G3DSA:1.20.5.400 2 62 3.9E-4 T 28-03-2018 RK98_RS12615 e70f8170bae7be16783c4232f4b2edd3 294 SUPERFAMILY SSF52540 9 201 1.85E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS12615 e70f8170bae7be16783c4232f4b2edd3 294 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 123 143 8.3E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS12615 e70f8170bae7be16783c4232f4b2edd3 294 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 169 184 8.3E-6 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS12615 e70f8170bae7be16783c4232f4b2edd3 294 Gene3D G3DSA:3.40.50.300 12 179 7.6E-32 T 28-03-2018 RK98_RS12615 e70f8170bae7be16783c4232f4b2edd3 294 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 279 5.1E-110 T 28-03-2018 IPR019991 GTP-binding protein, ribosome biogenesis RK98_RS12615 e70f8170bae7be16783c4232f4b2edd3 294 Gene3D G3DSA:1.10.1580.10 180 273 1.5E-19 T 28-03-2018 IPR023179 GTP-binding protein, orthogonal bundle domain RK98_RS12615 e70f8170bae7be16783c4232f4b2edd3 294 Pfam PF01926 50S ribosome-binding GTPase 123 204 7.8E-18 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 RK98_RS12615 e70f8170bae7be16783c4232f4b2edd3 294 PIRSF PIRSF006230 1 284 5.1E-96 T 28-03-2018 IPR016478 GTPase, MTG1 RK98_RS02095 ed85d57bf9c27c5758fc81f59b7a13df 209 Pfam PF16228 Domain of unknown function (DUF4887) 42 205 6.1E-50 T 28-03-2018 IPR032615 Protein of unknown function DUF4887 RK98_RS09010 eb99cc7d1996c18c24d2b0138620510a 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 6.9E-38 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P RK98_RS09010 eb99cc7d1996c18c24d2b0138620510a 146 SUPERFAMILY SSF52080 4 142 5.36E-49 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P RK98_RS09010 eb99cc7d1996c18c24d2b0138620510a 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.458 T 28-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 RK98_RS09010 eb99cc7d1996c18c24d2b0138620510a 146 Gene3D G3DSA:3.100.10.10 43 146 1.1E-31 T 28-03-2018 RK98_RS09010 eb99cc7d1996c18c24d2b0138620510a 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 28-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS09010 eb99cc7d1996c18c24d2b0138620510a 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 9.2E-55 T 28-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 SUPERFAMILY SSF48371 289 375 7.2E-10 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 Pfam PF13484 4Fe-4S double cluster binding domain 193 255 2.7E-14 T 28-03-2018 RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 Gene3D G3DSA:1.25.40.70 263 376 1.5E-5 T 28-03-2018 RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 15 346 5.7E-121 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 Gene3D G3DSA:3.30.70.20 59 198 0.0014 T 28-03-2018 RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 Pfam PF13646 HEAT repeats 304 375 1.8E-7 T 28-03-2018 RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 Gene3D G3DSA:3.30.70.20 199 256 9.6E-8 T 28-03-2018 RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 8 313 43.006 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 3.5E-17 T 28-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 RK98_RS00910 6bec06084ab1d7fe189f2417b6135bab 380 SUPERFAMILY SSF54862 169 255 9.63E-14 T 28-03-2018 RK98_RS01100 e442f77a66a5c8929991f57ab0105dba 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 9 427 3.3E-165 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 RK98_RS01100 e442f77a66a5c8929991f57ab0105dba 429 Gene3D G3DSA:3.40.640.10 170 314 1.4E-34 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS01100 e442f77a66a5c8929991f57ab0105dba 429 Pfam PF00202 Aminotransferase class-III 35 414 3.4E-72 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS01100 e442f77a66a5c8929991f57ab0105dba 429 SUPERFAMILY SSF53383 2 427 2.8E-121 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS01100 e442f77a66a5c8929991f57ab0105dba 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS01100 e442f77a66a5c8929991f57ab0105dba 429 Gene3D G3DSA:3.90.1150.10 315 429 6.9E-14 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS01100 e442f77a66a5c8929991f57ab0105dba 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 89.319 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 RK98_RS01100 e442f77a66a5c8929991f57ab0105dba 429 Gene3D G3DSA:3.90.1150.10 1 169 3.4E-41 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS08225 9a3ec6de9953e1b98f4a7bf5b8da6e23 207 SUPERFAMILY SSF46689 4 69 2.72E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS08225 9a3ec6de9953e1b98f4a7bf5b8da6e23 207 Gene3D G3DSA:1.10.10.60 47 135 8.8E-6 T 28-03-2018 RK98_RS08225 9a3ec6de9953e1b98f4a7bf5b8da6e23 207 Gene3D G3DSA:1.10.10.60 2 46 1.6E-12 T 28-03-2018 RK98_RS08225 9a3ec6de9953e1b98f4a7bf5b8da6e23 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 3.9E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS08225 9a3ec6de9953e1b98f4a7bf5b8da6e23 207 Pfam PF14278 Transcriptional regulator C-terminal region 93 166 8.4E-15 T 28-03-2018 RK98_RS03825 3a9c8e0927c455a63d1b7831103b1a6e 161 SUPERFAMILY SSF55729 5 152 9.94E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS03825 3a9c8e0927c455a63d1b7831103b1a6e 161 Pfam PF00583 Acetyltransferase (GNAT) family 37 140 2.2E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS03825 3a9c8e0927c455a63d1b7831103b1a6e 161 Gene3D G3DSA:3.40.630.30 1 161 1.1E-19 T 28-03-2018 RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 SUPERFAMILY SSF53822 63 327 2.51E-65 T 28-03-2018 IPR028082 Periplasmic binding protein-like I RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 1.2E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 1.2E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 Gene3D G3DSA:3.40.50.2300 176 309 3.8E-39 T 28-03-2018 RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 Pfam PF13377 Periplasmic binding protein-like domain 169 326 4.6E-35 T 28-03-2018 RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 28-03-2018 RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 SUPERFAMILY SSF47413 1 60 1.19E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 SMART SM00354 3 74 7.7E-27 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 51 1.7E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 Gene3D G3DSA:3.40.50.2300 59 175 9.6E-25 T 28-03-2018 RK98_RS04905 fce442f5a5a5f0d9477771c146ecb09a 332 Gene3D G3DSA:1.10.260.40 4 58 8.7E-18 T 28-03-2018 RK98_RS12925 ec28239725712f4b37c37e2b841e538f 304 SUPERFAMILY SSF53474 18 299 3.84E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS12925 ec28239725712f4b37c37e2b841e538f 304 Pfam PF12146 Serine aminopeptidase, S33 27 286 8.4E-50 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 RK98_RS12925 ec28239725712f4b37c37e2b841e538f 304 Gene3D G3DSA:3.40.50.1820 3 304 3.9E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS10265 be52660cdc6708aeaafd236a336c96c2 282 Gene3D G3DSA:3.40.50.150 7 228 5.8E-24 T 28-03-2018 RK98_RS10265 be52660cdc6708aeaafd236a336c96c2 282 PIRSF PIRSF028177 1 275 6.2E-94 T 28-03-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 RK98_RS10265 be52660cdc6708aeaafd236a336c96c2 282 SUPERFAMILY SSF53335 7 246 1.11E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS10265 be52660cdc6708aeaafd236a336c96c2 282 Pfam PF04072 Leucine carboxyl methyltransferase 46 175 4.7E-13 T 28-03-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 RK98_RS05630 3057178cf9ba7d6d4a05b9bc213fac4d 241 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 205 237 1.3E-4 T 28-03-2018 RK98_RS05630 3057178cf9ba7d6d4a05b9bc213fac4d 241 Pfam PF00746 LPXTG cell wall anchor motif 199 240 1.5E-6 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS07295 987af21b2872138d00d82bb2bac12477 322 Pfam PF07859 alpha/beta hydrolase fold 102 300 7.1E-30 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RK98_RS07295 987af21b2872138d00d82bb2bac12477 322 SUPERFAMILY SSF53474 52 303 6.35E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS07295 987af21b2872138d00d82bb2bac12477 322 Gene3D G3DSA:3.40.50.1820 31 322 1.3E-27 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS07220 f146f3fb6fdf7e6869a9c1d1ca2b8e6f 664 Pfam PF07664 Ferrous iron transport protein B C terminus 454 506 1.8E-18 T 28-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 RK98_RS07220 f146f3fb6fdf7e6869a9c1d1ca2b8e6f 664 SUPERFAMILY SSF52540 5 169 1.16E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07220 f146f3fb6fdf7e6869a9c1d1ca2b8e6f 664 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 8 631 6.8E-188 T 28-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 RK98_RS07220 f146f3fb6fdf7e6869a9c1d1ca2b8e6f 664 Pfam PF07670 Nucleoside recognition 511 635 2.6E-29 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RK98_RS07220 f146f3fb6fdf7e6869a9c1d1ca2b8e6f 664 Pfam PF07670 Nucleoside recognition 350 444 5.1E-15 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RK98_RS07220 f146f3fb6fdf7e6869a9c1d1ca2b8e6f 664 Pfam PF02421 Ferrous iron transport protein B 5 154 2.1E-56 T 28-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 RK98_RS07220 f146f3fb6fdf7e6869a9c1d1ca2b8e6f 664 Gene3D G3DSA:3.40.50.300 3 295 3.0E-27 T 28-03-2018 RK98_RS11090 1aa7b785c98566d03e9f7f8b10ef6837 309 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 59 302 1.7E-47 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RK98_RS11090 1aa7b785c98566d03e9f7f8b10ef6837 309 SUPERFAMILY SSF51695 54 308 5.49E-71 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS11090 1aa7b785c98566d03e9f7f8b10ef6837 309 Gene3D G3DSA:3.20.20.190 31 309 9.0E-81 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS04185 e94e8173582ec9788092ef78101a4e12 817 PIRSF PIRSF015040 1 817 3.2E-280 T 28-03-2018 IPR016628 ATPase, SAG2001, predicted RK98_RS04185 e94e8173582ec9788092ef78101a4e12 817 SUPERFAMILY SSF52540 409 800 3.98E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04185 e94e8173582ec9788092ef78101a4e12 817 Pfam PF12846 AAA-like domain 444 805 6.0E-151 T 28-03-2018 RK98_RS04185 e94e8173582ec9788092ef78101a4e12 817 Gene3D G3DSA:3.40.50.300 466 780 3.1E-14 T 28-03-2018 RK98_RS10005 ef3d0c97af6c9f880f9925eeb824501d 334 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 177 9.2E-76 T 28-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RK98_RS10005 ef3d0c97af6c9f880f9925eeb824501d 334 SUPERFAMILY SSF51735 3 182 1.66E-72 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS10005 ef3d0c97af6c9f880f9925eeb824501d 334 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 325 4.5E-65 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RK98_RS10005 ef3d0c97af6c9f880f9925eeb824501d 334 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 326 1.1E-132 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RK98_RS10005 ef3d0c97af6c9f880f9925eeb824501d 334 Gene3D G3DSA:1.10.1040.10 60 330 4.5E-114 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 RK98_RS10005 ef3d0c97af6c9f880f9925eeb824501d 334 Gene3D G3DSA:3.90.180.10 1 59 6.9E-5 T 28-03-2018 RK98_RS10005 ef3d0c97af6c9f880f9925eeb824501d 334 SUPERFAMILY SSF48179 183 329 8.16E-70 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 RK98_RS10005 ef3d0c97af6c9f880f9925eeb824501d 334 PIRSF PIRSF000116 4 207 1.3E-37 T 28-03-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RK98_RS10005 ef3d0c97af6c9f880f9925eeb824501d 334 PIRSF PIRSF000116 201 333 3.6E-14 T 28-03-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RK98_RS10005 ef3d0c97af6c9f880f9925eeb824501d 334 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 328 45.297 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 RK98_RS08470 618dff98badb7f827141bdf0d4d9bea2 294 Gene3D G3DSA:1.10.10.10 1 83 4.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08470 618dff98badb7f827141bdf0d4d9bea2 294 Gene3D G3DSA:3.40.190.10 90 173 1.0E-6 T 28-03-2018 RK98_RS08470 618dff98badb7f827141bdf0d4d9bea2 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.1E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS08470 618dff98badb7f827141bdf0d4d9bea2 294 Pfam PF03466 LysR substrate binding domain 91 285 3.5E-31 T 28-03-2018 IPR005119 LysR, substrate-binding RK98_RS08470 618dff98badb7f827141bdf0d4d9bea2 294 SUPERFAMILY SSF53850 91 287 8.87E-27 T 28-03-2018 RK98_RS08470 618dff98badb7f827141bdf0d4d9bea2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS08470 618dff98badb7f827141bdf0d4d9bea2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS08470 618dff98badb7f827141bdf0d4d9bea2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 RK98_RS08470 618dff98badb7f827141bdf0d4d9bea2 294 Gene3D G3DSA:3.40.190.10 174 261 8.5E-14 T 28-03-2018 RK98_RS08470 618dff98badb7f827141bdf0d4d9bea2 294 SUPERFAMILY SSF46785 2 84 1.28E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04560 d627cc3ce72ddd4e2d0036360e1193fe 80 SUPERFAMILY SSF103473 5 71 7.85E-11 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS04560 d627cc3ce72ddd4e2d0036360e1193fe 80 Gene3D G3DSA:1.20.1250.20 2 78 5.9E-9 T 28-03-2018 RK98_RS02255 4f1d2fd2b564be594bcc2e7cd43d13ef 374 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 338 3.9E-52 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RK98_RS02255 4f1d2fd2b564be594bcc2e7cd43d13ef 374 Gene3D G3DSA:3.90.1510.10 43 271 5.3E-38 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 RK98_RS02255 4f1d2fd2b564be594bcc2e7cd43d13ef 374 Pfam PF02595 Glycerate kinase family 3 339 5.3E-55 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RK98_RS02255 4f1d2fd2b564be594bcc2e7cd43d13ef 374 SUPERFAMILY SSF110738 1 367 6.15E-89 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 RK98_RS07865 07c1e81c864237d79cb134a389f9c1ef 268 SUPERFAMILY SSF56300 1 119 2.13E-29 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS07865 07c1e81c864237d79cb134a389f9c1ef 268 SUPERFAMILY SSF56300 146 250 2.13E-29 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS07865 07c1e81c864237d79cb134a389f9c1ef 268 Pfam PF00149 Calcineurin-like phosphoesterase 1 227 2.3E-12 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 RK98_RS07865 07c1e81c864237d79cb134a389f9c1ef 268 Gene3D G3DSA:3.60.21.10 1 265 3.4E-24 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS07865 07c1e81c864237d79cb134a389f9c1ef 268 TIGRFAM TIGR03729 acc_ester: putative phosphoesterase 2 246 7.9E-86 T 28-03-2018 IPR022302 Phosphoesterase, putative RK98_RS13100 76fcdbcca7c09bda159f17aa34dea7d4 267 Gene3D G3DSA:3.40.50.1000 1 267 9.9E-45 T 28-03-2018 IPR023214 HAD-like domain RK98_RS13100 76fcdbcca7c09bda159f17aa34dea7d4 267 SUPERFAMILY SSF56784 1 267 2.94E-69 T 28-03-2018 IPR023214 HAD-like domain RK98_RS13100 76fcdbcca7c09bda159f17aa34dea7d4 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 263 2.2E-55 T 28-03-2018 IPR000150 Cof family GO:0016787 RK98_RS13100 76fcdbcca7c09bda159f17aa34dea7d4 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 236 2.9E-24 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 RK98_RS13100 76fcdbcca7c09bda159f17aa34dea7d4 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 263 2.8E-65 T 28-03-2018 IPR023214 HAD-like domain RK98_RS14350 30a801afbb119c6b76cd9ad5444c41b6 272 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 268 59.028 T 28-03-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein RK98_RS14350 30a801afbb119c6b76cd9ad5444c41b6 272 Pfam PF03618 Kinase/pyrophosphorylase 6 263 6.9E-93 T 28-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 RK98_RS14350 30a801afbb119c6b76cd9ad5444c41b6 272 Gene3D G3DSA:3.40.50.300 17 272 1.4E-5 T 28-03-2018 RK98_RS11880 533652db2cdfb4e20e3187bf0aa0e206 160 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 1 159 2.0E-90 T 28-03-2018 IPR020229 Uncharacterised protein YlaL RK98_RS05320 e482ca948545431d256fc0f366486541 929 Pfam PF04851 Type III restriction enzyme, res subunit 239 401 3.0E-35 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RK98_RS05320 e482ca948545431d256fc0f366486541 929 Gene3D G3DSA:3.40.50.300 217 422 1.4E-26 T 28-03-2018 RK98_RS05320 e482ca948545431d256fc0f366486541 929 SMART SM00487 237 427 1.2E-17 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK98_RS05320 e482ca948545431d256fc0f366486541 929 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 3 186 3.1E-40 T 28-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 RK98_RS05320 e482ca948545431d256fc0f366486541 929 SUPERFAMILY SSF52540 232 401 8.36E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05320 e482ca948545431d256fc0f366486541 929 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 6 663 1.7E-137 T 28-03-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 RK98_RS05320 e482ca948545431d256fc0f366486541 929 Pfam PF12008 Type I restriction and modification enzyme - subunit R C terminal 669 926 3.8E-51 T 28-03-2018 IPR022625 Type-1 restriction enzyme R protein, C-terminal RK98_RS02630 fe50b3969f410d771835aea601765f9b 406 Pfam PF07690 Major Facilitator Superfamily 19 246 1.2E-20 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS02630 fe50b3969f410d771835aea601765f9b 406 Gene3D G3DSA:1.20.1250.20 2 208 2.5E-22 T 28-03-2018 RK98_RS02630 fe50b3969f410d771835aea601765f9b 406 SUPERFAMILY SSF103473 13 397 3.66E-51 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS02630 fe50b3969f410d771835aea601765f9b 406 Gene3D G3DSA:1.20.1250.20 209 399 4.6E-26 T 28-03-2018 RK98_RS10610 090b3e591f092be7addb87ccc24ee9c1 261 Pfam PF01695 IstB-like ATP binding protein 86 222 1.8E-16 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 RK98_RS10610 090b3e591f092be7addb87ccc24ee9c1 261 SUPERFAMILY SSF52540 85 248 1.08E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS10610 090b3e591f092be7addb87ccc24ee9c1 261 Gene3D G3DSA:3.40.50.300 67 250 3.4E-16 T 28-03-2018 RK98_RS13425 4a5b41ce611dd20da830e0518da38d47 327 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 290 1.7E-103 T 28-03-2018 IPR011862 Phosphate binding protein GO:0006810 RK98_RS13425 4a5b41ce611dd20da830e0518da38d47 327 Pfam PF12849 PBP superfamily domain 30 278 9.7E-40 T 28-03-2018 IPR024370 PBP domain RK98_RS13425 4a5b41ce611dd20da830e0518da38d47 327 SUPERFAMILY SSF53850 38 304 1.09E-69 T 28-03-2018 RK98_RS13425 4a5b41ce611dd20da830e0518da38d47 327 Gene3D G3DSA:3.40.190.10 36 158 4.4E-36 T 28-03-2018 RK98_RS13425 4a5b41ce611dd20da830e0518da38d47 327 Gene3D G3DSA:3.40.190.10 159 308 2.0E-16 T 28-03-2018 RK98_RS08280 0eefbe6c06fcd60dfcc4eb0106163987 532 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 13 529 3.7E-159 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RK98_RS08280 0eefbe6c06fcd60dfcc4eb0106163987 532 Pfam PF02652 L-lactate permease 14 528 3.8E-160 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RK98_RS00855 0f615c66ce2dda94128a4db742fba64a 114 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 6 108 1.0E-25 T 28-03-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA RK98_RS00855 0f615c66ce2dda94128a4db742fba64a 114 Hamap MF_01526 UPF0342 protein . 2 113 19.809 T 28-03-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA RK98_RS00855 0f615c66ce2dda94128a4db742fba64a 114 SUPERFAMILY SSF158622 3 113 1.18E-36 T 28-03-2018 IPR023378 YheA/YmcA-like domain RK98_RS00855 0f615c66ce2dda94128a4db742fba64a 114 Gene3D G3DSA:1.20.1500.10 4 109 1.8E-28 T 28-03-2018 IPR023378 YheA/YmcA-like domain RK98_RS02615 4e84e48c3db4986e8f22048e7c312618 147 Pfam PF00583 Acetyltransferase (GNAT) family 44 135 4.4E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS02615 4e84e48c3db4986e8f22048e7c312618 147 SUPERFAMILY SSF55729 2 115 2.26E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS02615 4e84e48c3db4986e8f22048e7c312618 147 Gene3D G3DSA:3.40.630.30 1 118 1.9E-20 T 28-03-2018 RK98_RS03080 33b6f2aada0e43096dbd7824563826d4 328 SUPERFAMILY SSF53659 5 326 6.58E-90 T 28-03-2018 RK98_RS03080 33b6f2aada0e43096dbd7824563826d4 328 Pfam PF01515 Phosphate acetyl/butaryl transferase 7 323 4.4E-119 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RK98_RS03080 33b6f2aada0e43096dbd7824563826d4 328 Gene3D G3DSA:3.40.718.10 17 293 2.7E-60 T 28-03-2018 RK98_RS03080 33b6f2aada0e43096dbd7824563826d4 328 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 323 1.9E-117 T 28-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RK98_RS03080 33b6f2aada0e43096dbd7824563826d4 328 PIRSF PIRSF000428 1 328 6.1E-111 T 28-03-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 RK98_RS00905 47cf77290baa1aa4cf769e4d2c112ebf 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 153 34.349 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RK98_RS00905 47cf77290baa1aa4cf769e4d2c112ebf 156 SUPERFAMILY SSF75217 4 154 1.05E-41 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases RK98_RS00905 47cf77290baa1aa4cf769e4d2c112ebf 156 Gene3D G3DSA:3.40.1280.10 1 156 2.7E-38 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK98_RS00905 47cf77290baa1aa4cf769e4d2c112ebf 156 PIRSF PIRSF029256 2 156 9.2E-68 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RK98_RS00905 47cf77290baa1aa4cf769e4d2c112ebf 156 Pfam PF00588 SpoU rRNA Methylase family 4 144 1.3E-32 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 RK98_RS00905 47cf77290baa1aa4cf769e4d2c112ebf 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 4 155 2.7E-64 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 224 250 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 Gene3D G3DSA:1.10.1740.10 34 102 1.8E-20 T 28-03-2018 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 Gene3D G3DSA:1.10.10.10 7 33 0.37 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 SUPERFAMILY SSF88946 9 104 9.94E-26 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 Pfam PF04542 Sigma-70 region 2 35 104 6.5E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 Gene3D G3DSA:1.10.10.10 182 256 2.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 30 254 3.1E-90 T 28-03-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 SUPERFAMILY SSF88659 109 182 7.41E-14 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 253 3.7E-38 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 Pfam PF04539 Sigma-70 region 3 117 188 1.3E-17 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 3 256 1.1E-145 T 28-03-2018 IPR014288 RNA polymerase sigma-B factor GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 SUPERFAMILY SSF88659 179 254 1.42E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 Pfam PF04545 Sigma-70, region 4 205 252 2.6E-15 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 PRINTS PR00046 Major sigma-70 factor signature 59 72 1.1E-9 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 PRINTS PR00046 Major sigma-70 factor signature 224 239 1.1E-9 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 PRINTS PR00046 Major sigma-70 factor signature 207 219 1.1E-9 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 PRINTS PR00046 Major sigma-70 factor signature 239 250 1.1E-9 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 59 72 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS09935 95151db362a08011d4c1d5601b294c93 256 Gene3D G3DSA:1.10.10.10 106 158 3.8E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS11220 418b2767e75f0c9810ff406dbfc0474a 308 SUPERFAMILY SSF161098 86 285 6.21E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS11220 418b2767e75f0c9810ff406dbfc0474a 308 Gene3D G3DSA:1.10.3720.10 2 291 6.9E-42 T 28-03-2018 RK98_RS11220 418b2767e75f0c9810ff406dbfc0474a 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 302 8.2E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 69 80 9.3E-13 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 161 174 9.3E-13 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00096 Glutamine amidotransferase superfamily signature 43 52 9.3E-13 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 Pfam PF00117 Glutamine amidotransferase class-I 4 181 1.6E-36 T 28-03-2018 IPR017926 Glutamine amidotransferase RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00097 Anthranilate synthase component II signature 43 52 4.3E-32 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00097 Anthranilate synthase component II signature 69 80 4.3E-32 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00097 Anthranilate synthase component II signature 94 102 4.3E-32 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00097 Anthranilate synthase component II signature 161 174 4.3E-32 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00097 Anthranilate synthase component II signature 2 16 4.3E-32 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00097 Anthranilate synthase component II signature 117 129 4.3E-32 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 183 7.4E-45 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 69 85 1.6E-5 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 40 54 1.6E-5 T 28-03-2018 RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 SUPERFAMILY SSF52317 1 186 2.22E-44 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS13315 d6f792688faba960a0409dd28df91c08 188 Gene3D G3DSA:3.40.50.880 1 188 8.7E-44 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 424 2.1E-145 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 428 28.378 T 28-03-2018 IPR026593 Protein translocase subunit SecY RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 SUPERFAMILY SSF103491 1 418 2.09E-122 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 Gene3D G3DSA:1.10.3370.10 1 430 9.3E-148 T 28-03-2018 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 147 172 9.0E-99 T 28-03-2018 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 9.0E-99 T 28-03-2018 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 308 330 9.0E-99 T 28-03-2018 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 9.0E-99 T 28-03-2018 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 9.0E-99 T 28-03-2018 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 173 196 9.0E-99 T 28-03-2018 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 9.0E-99 T 28-03-2018 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 9.0E-99 T 28-03-2018 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 363 381 9.0E-99 T 28-03-2018 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 PIRSF PIRSF004557 1 428 3.5E-129 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 Pfam PF00344 SecY translocase 69 412 9.9E-108 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS09015 5c6c0577e1335a173a39a11e6ce5df61 430 ProSitePatterns PS00756 Protein secY signature 2. 166 183 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS07620 c6e80bba66d07eb7021854aeb6a33971 93 Pfam PF07205 Domain of unknown function (DUF1413) 9 73 1.1E-18 T 28-03-2018 IPR010813 Protein of unknown function DUF1413 RK98_RS10115 7ef82117e7ddbe1e3183fa1902622b82 47 Pfam PF05931 Staphylococcal AgrD protein 2 45 4.2E-14 T 28-03-2018 IPR009229 Staphylococcal AgrD RK98_RS10115 7ef82117e7ddbe1e3183fa1902622b82 47 SMART SM00794 2 46 5.4E-18 T 28-03-2018 IPR009229 Staphylococcal AgrD RK98_RS10115 7ef82117e7ddbe1e3183fa1902622b82 47 TIGRFAM TIGR04223 quorum_AgrD: cyclic lactone autoinducer peptide 6 43 2.5E-9 T 28-03-2018 IPR009229 Staphylococcal AgrD RK98_RS02560 c17e9a65b0bfba04e7ada7e4928d0e34 308 SUPERFAMILY SSF90002 220 303 1.96E-12 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK98_RS02560 c17e9a65b0bfba04e7ada7e4928d0e34 308 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 11 185 2.2E-44 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RK98_RS02560 c17e9a65b0bfba04e7ada7e4928d0e34 308 Gene3D G3DSA:3.40.50.300 6 204 7.7E-29 T 28-03-2018 RK98_RS02560 c17e9a65b0bfba04e7ada7e4928d0e34 308 SMART SM00833 220 306 1.8E-18 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK98_RS02560 c17e9a65b0bfba04e7ada7e4928d0e34 308 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 220 304 5.4E-14 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK98_RS02560 c17e9a65b0bfba04e7ada7e4928d0e34 308 SUPERFAMILY SSF52540 7 193 2.29E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02560 c17e9a65b0bfba04e7ada7e4928d0e34 308 Gene3D G3DSA:3.30.1220.10 205 307 2.4E-16 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal RK98_RS13280 5694269cc6f4b550c3ebe0334360fa50 169 Pfam PF01625 Peptide methionine sulfoxide reductase 5 156 6.4E-59 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS13280 5694269cc6f4b550c3ebe0334360fa50 169 SUPERFAMILY SSF55068 2 156 1.83E-65 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS13280 5694269cc6f4b550c3ebe0334360fa50 169 Gene3D G3DSA:3.30.1060.10 2 169 2.7E-61 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS13280 5694269cc6f4b550c3ebe0334360fa50 169 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 35.304 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS13280 5694269cc6f4b550c3ebe0334360fa50 169 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 155 2.2E-56 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 RK98_RS11725 7c7cd0e3e0eab42d2f8f8c5e05f927b5 390 Gene3D G3DSA:3.40.50.150 175 388 4.5E-24 T 28-03-2018 RK98_RS11725 7c7cd0e3e0eab42d2f8f8c5e05f927b5 390 Gene3D G3DSA:3.30.750.80 70 174 2.3E-26 T 28-03-2018 RK98_RS11725 7c7cd0e3e0eab42d2f8f8c5e05f927b5 390 Gene3D G3DSA:2.30.130.10 3 65 5.8E-17 T 28-03-2018 IPR002478 PUA domain GO:0003723 RK98_RS11725 7c7cd0e3e0eab42d2f8f8c5e05f927b5 390 SUPERFAMILY SSF53335 77 385 1.3E-59 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS11725 7c7cd0e3e0eab42d2f8f8c5e05f927b5 390 SUPERFAMILY SSF88697 1 69 3.48E-19 T 28-03-2018 IPR015947 PUA-like domain RK98_RS11725 7c7cd0e3e0eab42d2f8f8c5e05f927b5 390 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 149 336 3.3E-24 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 RK98_RS13610 1e2c7fab2b61bb2b5387bba2c7bc1a5c 142 Gene3D G3DSA:2.170.150.20 2 141 5.1E-50 T 28-03-2018 RK98_RS13610 1e2c7fab2b61bb2b5387bba2c7bc1a5c 142 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 6 133 8.9E-58 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RK98_RS13610 1e2c7fab2b61bb2b5387bba2c7bc1a5c 142 Pfam PF01641 SelR domain 6 124 3.9E-47 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RK98_RS13610 1e2c7fab2b61bb2b5387bba2c7bc1a5c 142 SUPERFAMILY SSF51316 6 139 1.83E-55 T 28-03-2018 IPR011057 Mss4-like RK98_RS13610 1e2c7fab2b61bb2b5387bba2c7bc1a5c 142 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 125 34.717 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 SUPERFAMILY SSF46689 195 243 4.03E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 SUPERFAMILY SSF46689 141 191 9.86E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 Gene3D G3DSA:2.60.40.1500 581 729 3.4E-21 T 28-03-2018 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 SMART SM00342 158 241 7.1E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 Pfam PF12833 Helix-turn-helix domain 164 241 2.1E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 SUPERFAMILY SSF51215 7 124 5.36E-8 T 28-03-2018 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 Gene3D G3DSA:1.10.10.60 133 194 1.9E-12 T 28-03-2018 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 225 241 5.6E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 210 225 5.6E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 SUPERFAMILY SSF51011 585 730 5.04E-16 T 28-03-2018 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 Gene3D G3DSA:1.10.10.60 195 261 4.0E-12 T 28-03-2018 RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 SUPERFAMILY SSF51445 361 596 3.62E-7 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily RK98_RS05800 7a39924965812eeb93e9e941b1eee3b1 732 Gene3D G3DSA:2.60.120.280 3 132 3.8E-7 T 28-03-2018 RK98_RS02295 3fb8b4d6f75697705d27376f01400064 318 SUPERFAMILY SSF81345 7 314 3.66E-56 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS02295 3fb8b4d6f75697705d27376f01400064 318 Pfam PF01032 FecCD transport family 34 313 1.9E-50 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RK98_RS02295 3fb8b4d6f75697705d27376f01400064 318 Gene3D G3DSA:1.10.3470.10 22 318 9.2E-33 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 SUPERFAMILY SSF56059 1 238 2.3E-83 T 28-03-2018 RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 28-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.3E-164 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 SUPERFAMILY SSF52210 239 386 9.16E-53 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 Pfam PF08442 ATP-grasp domain 2 202 1.7E-83 T 28-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 Gene3D G3DSA:3.40.50.261 240 385 1.4E-41 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 Gene3D G3DSA:3.30.470.20 96 239 3.7E-57 T 28-03-2018 RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 44.437 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 PIRSF PIRSF001554 1 388 1.2E-156 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 Gene3D G3DSA:3.30.1490.20 21 95 2.9E-24 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 RK98_RS12625 2bcab01463f328e580d2bc12e8a6bc7e 388 Pfam PF00549 CoA-ligase 262 380 9.5E-24 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 RK98_RS05645 3acb1ba609222d58f458aede519b9000 412 Pfam PF04932 O-Antigen ligase 194 345 5.7E-13 T 28-03-2018 IPR007016 O-antigen ligase-related RK98_RS06045 5505404e69595126558614f905b553d0 125 ProDom PD020942 TRANSPOSASE C TN554 TRANSPOSON TRANSPOSITION FOR DNA-BINDING TRANSPOSABLE DNA ELEMENT 7 122 4.0E-60 T 28-03-2018 RK98_RS14840 5505404e69595126558614f905b553d0 125 ProDom PD020942 TRANSPOSASE C TN554 TRANSPOSON TRANSPOSITION FOR DNA-BINDING TRANSPOSABLE DNA ELEMENT 7 122 4.0E-60 T 28-03-2018 RK98_RS01270 a1a3b9367353d399974e6d67d87ab4f3 166 Gene3D G3DSA:1.20.1260.10 1 162 1.5E-44 T 28-03-2018 IPR012347 Ferritin-related RK98_RS01270 a1a3b9367353d399974e6d67d87ab4f3 166 SUPERFAMILY SSF47240 1 160 1.3E-56 T 28-03-2018 IPR009078 Ferritin-like superfamily RK98_RS01270 a1a3b9367353d399974e6d67d87ab4f3 166 Pfam PF00210 Ferritin-like domain 8 144 2.7E-42 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RK98_RS08915 43664c964c0a2f8ed6f60a04d4c2d69d 220 SUPERFAMILY SSF50447 1 219 1.41E-78 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain RK98_RS08915 43664c964c0a2f8ed6f60a04d4c2d69d 220 Gene3D G3DSA:4.10.960.10 66 173 1.1E-32 T 28-03-2018 RK98_RS08915 43664c964c0a2f8ed6f60a04d4c2d69d 220 Pfam PF00297 Ribosomal protein L3 106 216 5.7E-15 T 28-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08915 43664c964c0a2f8ed6f60a04d4c2d69d 220 ProSitePatterns PS00474 Ribosomal protein L3 signature. 110 133 - T 28-03-2018 IPR019926 Ribosomal protein L3, conserved site RK98_RS08915 43664c964c0a2f8ed6f60a04d4c2d69d 220 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 212 1.3E-83 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08915 43664c964c0a2f8ed6f60a04d4c2d69d 220 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 215 39.41 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS07645 4cd7d75d50d7fa9cbe1d7334e5ee88fb 139 Gene3D G3DSA:3.10.450.130 38 137 2.7E-24 T 28-03-2018 RK98_RS07645 4cd7d75d50d7fa9cbe1d7334e5ee88fb 139 Pfam PF07252 Protein of unknown function (DUF1433) 39 130 4.9E-38 T 28-03-2018 IPR009881 Protein of unknown function DUF1433 RK98_RS07810 fb15602a3d0acdac2c8d011fa43b7b53 231 SUPERFAMILY SSF161098 18 205 2.88E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS07810 fb15602a3d0acdac2c8d011fa43b7b53 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 215 4.0E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS07810 fb15602a3d0acdac2c8d011fa43b7b53 231 Gene3D G3DSA:1.10.3720.10 3 217 4.7E-29 T 28-03-2018 RK98_RS01755 f9533ce46fb459f8504b0741f30bd4bf 122 Pfam PF07768 PVL ORF-50-like family 7 119 4.7E-44 T 28-03-2018 IPR011688 PVL Orf50 family RK98_RS08095 fdde5793bdcd45b45d2d5c156e73f7d5 243 Pfam PF01903 CbiX 9 112 3.6E-27 T 28-03-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 RK98_RS08095 fdde5793bdcd45b45d2d5c156e73f7d5 243 Gene3D G3DSA:3.40.50.1400 120 240 3.0E-8 T 28-03-2018 RK98_RS08095 fdde5793bdcd45b45d2d5c156e73f7d5 243 Gene3D G3DSA:3.40.50.1400 2 119 1.4E-22 T 28-03-2018 RK98_RS08095 fdde5793bdcd45b45d2d5c156e73f7d5 243 SUPERFAMILY SSF53800 5 235 2.83E-27 T 28-03-2018 RK98_RS04805 ec1467fce86e2d65eb465a6f2c702702 105 Gene3D G3DSA:1.10.287.1060 5 97 6.7E-4 T 28-03-2018 RK98_RS06820 673ed38e9e0f9f090032877d0f81e91a 165 Pfam PF00255 Glutathione peroxidase 6 113 2.0E-32 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RK98_RS06820 673ed38e9e0f9f090032877d0f81e91a 165 PIRSF PIRSF000303 1 164 1.6E-61 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RK98_RS06820 673ed38e9e0f9f090032877d0f81e91a 165 SUPERFAMILY SSF52833 5 161 1.21E-51 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS06820 673ed38e9e0f9f090032877d0f81e91a 165 Gene3D G3DSA:3.40.30.10 4 162 1.0E-39 T 28-03-2018 RK98_RS06820 673ed38e9e0f9f090032877d0f81e91a 165 PRINTS PR01011 Glutathione peroxidase family signature 59 75 2.6E-12 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RK98_RS06820 673ed38e9e0f9f090032877d0f81e91a 165 PRINTS PR01011 Glutathione peroxidase family signature 124 133 2.6E-12 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RK98_RS06820 673ed38e9e0f9f090032877d0f81e91a 165 PRINTS PR01011 Glutathione peroxidase family signature 24 41 2.6E-12 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 RK98_RS04395 ec76100639507961ba029239dde5b239 167 Pfam PF00436 Single-strand binding protein family 2 103 2.0E-36 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 RK98_RS04395 ec76100639507961ba029239dde5b239 167 Gene3D G3DSA:2.40.50.140 1 122 7.6E-41 T 28-03-2018 RK98_RS04395 ec76100639507961ba029239dde5b239 167 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 167 1.9E-48 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RK98_RS04395 ec76100639507961ba029239dde5b239 167 PIRSF PIRSF002070 1 157 1.6E-39 T 28-03-2018 RK98_RS04395 ec76100639507961ba029239dde5b239 167 SUPERFAMILY SSF50249 1 167 2.91E-55 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS04395 ec76100639507961ba029239dde5b239 167 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 35.935 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 Pfam PF02110 Hydroxyethylthiazole kinase family 4 250 6.9E-76 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 Gene3D G3DSA:3.40.1190.20 1 263 2.0E-53 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 82 99 8.6E-33 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 156 173 8.6E-33 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 25 46 8.6E-33 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 113 127 8.6E-33 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 12 19 8.6E-33 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 56 64 8.6E-33 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 6 254 29.875 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 SUPERFAMILY SSF53613 2 261 6.7E-59 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS09765 512347c917db89e2c6162fae3cfcc1ed 263 PIRSF PIRSF000513 1 262 7.2E-86 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 RK98_RS01425 f6c418d7401b1baf5bd4b4ea8b9ade68 309 Pfam PF01368 DHH family 3 146 1.2E-28 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 RK98_RS01425 f6c418d7401b1baf5bd4b4ea8b9ade68 309 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 309 46.264 T 28-03-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 RK98_RS01425 f6c418d7401b1baf5bd4b4ea8b9ade68 309 Gene3D G3DSA:3.90.1640.10 1 188 2.4E-63 T 28-03-2018 RK98_RS01425 f6c418d7401b1baf5bd4b4ea8b9ade68 309 SUPERFAMILY SSF64182 3 307 2.35E-78 T 28-03-2018 RK98_RS01425 f6c418d7401b1baf5bd4b4ea8b9ade68 309 Pfam PF02833 DHHA2 domain 183 306 4.7E-19 T 28-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 RK98_RS01425 f6c418d7401b1baf5bd4b4ea8b9ade68 309 SMART SM01131 181 307 5.2E-50 T 28-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 Pfam PF00696 Amino acid kinase family 3 283 3.9E-28 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 Gene3D G3DSA:3.40.1160.10 1 310 6.5E-57 T 28-03-2018 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 PIRSF PIRSF000723 1 310 1.3E-125 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 TIGRFAM TIGR00746 arcC: carbamate kinase 3 309 7.9E-116 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 PRINTS PR01469 Bacterial carbamate kinase signature 38 57 6.6E-61 T 28-03-2018 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 PRINTS PR01469 Bacterial carbamate kinase signature 71 89 6.6E-61 T 28-03-2018 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 6.6E-61 T 28-03-2018 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 PRINTS PR01469 Bacterial carbamate kinase signature 155 174 6.6E-61 T 28-03-2018 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 PRINTS PR01469 Bacterial carbamate kinase signature 178 196 6.6E-61 T 28-03-2018 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 PRINTS PR01469 Bacterial carbamate kinase signature 106 125 6.6E-61 T 28-03-2018 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 6.6E-61 T 28-03-2018 RK98_RS12225 4adee6de883a761338e65d5a4c231678 310 SUPERFAMILY SSF53633 1 308 1.57E-81 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase RK98_RS03000 def1c01ea9858b6a6d3ae8f4f0b7375b 158 Pfam PF00583 Acetyltransferase (GNAT) family 38 134 8.4E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS03000 def1c01ea9858b6a6d3ae8f4f0b7375b 158 Gene3D G3DSA:3.40.630.30 1 158 4.5E-29 T 28-03-2018 RK98_RS03000 def1c01ea9858b6a6d3ae8f4f0b7375b 158 SUPERFAMILY SSF55729 1 146 9.79E-27 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS14000 559f9571742d4841de9a13339136c01f 243 Gene3D G3DSA:1.10.10.580 165 235 6.9E-11 T 28-03-2018 RK98_RS14000 559f9571742d4841de9a13339136c01f 243 Hamap MF_01805 Segregation and condensation protein A [scpA]. 2 238 24.226 T 28-03-2018 IPR003768 Segregation and condensation protein A RK98_RS14000 559f9571742d4841de9a13339136c01f 243 Pfam PF02616 Segregation and condensation protein ScpA 19 234 5.2E-35 T 28-03-2018 IPR003768 Segregation and condensation protein A RK98_RS07630 d7a5318cae0aed63518d792b888fa1e4 140 Pfam PF07252 Protein of unknown function (DUF1433) 39 131 5.9E-39 T 28-03-2018 IPR009881 Protein of unknown function DUF1433 RK98_RS07630 d7a5318cae0aed63518d792b888fa1e4 140 Gene3D G3DSA:3.10.450.130 38 137 3.2E-24 T 28-03-2018 RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 Pfam PF00005 ABC transporter 321 466 1.9E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 Pfam PF00005 ABC transporter 23 173 9.9E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 SMART SM00382 32 224 3.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 SMART SM00382 330 514 2.9E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 SUPERFAMILY SSF52540 2 238 5.44E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 SUPERFAMILY SSF52540 296 532 2.56E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 Gene3D G3DSA:3.40.50.300 299 545 2.1E-55 T 28-03-2018 RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 Gene3D G3DSA:3.40.50.300 1 246 9.1E-58 T 28-03-2018 RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 Pfam PF12558 ATP-binding cassette cobalt transporter 238 309 9.6E-20 T 28-03-2018 IPR022216 ABC cobalt transporter GO:0016820 RK98_RS06475 5c1c77348fe35c7fcc725750ccda02b5 570 ProSitePatterns PS00211 ABC transporters family signature. 438 452 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS02955 7494a173dad5fb205feddcec6cce8d12 316 Pfam PF01032 FecCD transport family 17 309 1.7E-63 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RK98_RS02955 7494a173dad5fb205feddcec6cce8d12 316 SUPERFAMILY SSF81345 7 309 7.85E-57 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS02955 7494a173dad5fb205feddcec6cce8d12 316 Gene3D G3DSA:1.10.3470.10 5 316 7.6E-50 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS14325 c81ac786cd8abd9d6459432017e34d73 448 Pfam PF00271 Helicase conserved C-terminal domain 232 338 2.1E-26 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS14325 c81ac786cd8abd9d6459432017e34d73 448 SMART SM00490 257 338 5.0E-27 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS14325 c81ac786cd8abd9d6459432017e34d73 448 Gene3D G3DSA:3.40.50.300 215 448 1.7E-43 T 28-03-2018 RK98_RS14325 c81ac786cd8abd9d6459432017e34d73 448 Pfam PF00270 DEAD/DEAH box helicase 28 192 2.2E-38 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 RK98_RS14325 c81ac786cd8abd9d6459432017e34d73 448 SMART SM00487 23 221 3.6E-45 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK98_RS14325 c81ac786cd8abd9d6459432017e34d73 448 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 4 437 47.789 T 28-03-2018 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 RK98_RS14325 c81ac786cd8abd9d6459432017e34d73 448 Gene3D G3DSA:3.40.50.300 1 214 2.4E-46 T 28-03-2018 RK98_RS14325 c81ac786cd8abd9d6459432017e34d73 448 SUPERFAMILY SSF52540 72 358 6.53E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02665 ebfc121cc4a85241ca6347c73a340dbe 716 SUPERFAMILY SSF46689 204 251 3.72E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS02665 ebfc121cc4a85241ca6347c73a340dbe 716 SMART SM00342 167 250 7.8E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS02665 ebfc121cc4a85241ca6347c73a340dbe 716 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 204 246 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 RK98_RS02665 ebfc121cc4a85241ca6347c73a340dbe 716 Gene3D G3DSA:1.10.10.60 206 258 1.1E-9 T 28-03-2018 RK98_RS02665 ebfc121cc4a85241ca6347c73a340dbe 716 Gene3D G3DSA:2.60.120.10 25 205 1.5E-8 T 28-03-2018 IPR014710 RmlC-like jelly roll fold RK98_RS02665 ebfc121cc4a85241ca6347c73a340dbe 716 Pfam PF12833 Helix-turn-helix domain 174 251 1.3E-13 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS13350 3c65d890e183d1803ad3bfccf3a7aeba 419 SUPERFAMILY SSF55729 1 166 2.81E-44 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS13350 3c65d890e183d1803ad3bfccf3a7aeba 419 SUPERFAMILY SSF55729 169 246 1.31E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS13350 3c65d890e183d1803ad3bfccf3a7aeba 419 SUPERFAMILY SSF55729 309 408 1.31E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS13350 3c65d890e183d1803ad3bfccf3a7aeba 419 Pfam PF02388 FemAB family 6 412 1.7E-141 T 28-03-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 RK98_RS13350 3c65d890e183d1803ad3bfccf3a7aeba 419 Gene3D G3DSA:3.40.630.30 170 388 2.7E-32 T 28-03-2018 RK98_RS13350 3c65d890e183d1803ad3bfccf3a7aeba 419 Gene3D G3DSA:3.40.630.30 1 169 1.7E-27 T 28-03-2018 RK98_RS14355 e9ba9b6be440b9503e01e30439ed341d 207 SUPERFAMILY SSF54631 74 201 2.02E-20 T 28-03-2018 RK98_RS14355 e9ba9b6be440b9503e01e30439ed341d 207 Pfam PF08279 HTH domain 6 57 8.1E-13 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 RK98_RS14355 e9ba9b6be440b9503e01e30439ed341d 207 Gene3D G3DSA:3.10.580.10 61 207 1.9E-23 T 28-03-2018 RK98_RS14355 e9ba9b6be440b9503e01e30439ed341d 207 SMART SM00116 83 131 0.24 T 28-03-2018 IPR000644 CBS domain RK98_RS14355 e9ba9b6be440b9503e01e30439ed341d 207 SMART SM00116 150 202 1.2 T 28-03-2018 IPR000644 CBS domain RK98_RS14355 e9ba9b6be440b9503e01e30439ed341d 207 SUPERFAMILY SSF46785 2 77 9.56E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14355 e9ba9b6be440b9503e01e30439ed341d 207 Pfam PF00571 CBS domain 145 202 9.6E-5 T 28-03-2018 IPR000644 CBS domain RK98_RS14355 e9ba9b6be440b9503e01e30439ed341d 207 Pfam PF00571 CBS domain 77 130 1.4E-7 T 28-03-2018 IPR000644 CBS domain RK98_RS14355 e9ba9b6be440b9503e01e30439ed341d 207 PIRSF PIRSF026546 1 207 1.3E-100 T 28-03-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS RK98_RS14355 e9ba9b6be440b9503e01e30439ed341d 207 Gene3D G3DSA:1.10.10.10 1 60 1.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08440 d7e510c53888090180531d0f1101ce40 339 Gene3D G3DSA:2.70.98.10 1 334 1.4E-67 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 RK98_RS08440 d7e510c53888090180531d0f1101ce40 339 Pfam PF01263 Aldose 1-epimerase 13 331 1.3E-57 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 RK98_RS08440 d7e510c53888090180531d0f1101ce40 339 SUPERFAMILY SSF74650 4 332 1.26E-78 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 RK98_RS13940 85cb26848c0a5b6e6724375be34e26bb 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 5.1E-8 T 28-03-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 RK98_RS13940 85cb26848c0a5b6e6724375be34e26bb 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 5.1E-8 T 28-03-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 RK98_RS13940 85cb26848c0a5b6e6724375be34e26bb 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 5.1E-8 T 28-03-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 RK98_RS13940 85cb26848c0a5b6e6724375be34e26bb 82 Gene3D G3DSA:3.30.70.20 2 82 1.9E-10 T 28-03-2018 RK98_RS13940 85cb26848c0a5b6e6724375be34e26bb 82 SUPERFAMILY SSF54862 4 72 3.94E-14 T 28-03-2018 RK98_RS13940 85cb26848c0a5b6e6724375be34e26bb 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 68 1.6E-22 T 28-03-2018 RK98_RS14785 e4749e33a4e9a791fe9d946957a08128 176 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 157 8.6E-24 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RK98_RS14785 e4749e33a4e9a791fe9d946957a08128 176 Pfam PF04093 rod shape-determining protein MreD 1 164 2.7E-40 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 PRINTS PR02037 FPRL1 inhibitory protein signature 29 42 1.4E-47 T 28-03-2018 IPR023256 FPRL1 inhibitory protein RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 PRINTS PR02037 FPRL1 inhibitory protein signature 91 104 1.4E-47 T 28-03-2018 IPR023256 FPRL1 inhibitory protein RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 PRINTS PR02037 FPRL1 inhibitory protein signature 118 133 1.4E-47 T 28-03-2018 IPR023256 FPRL1 inhibitory protein RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 PRINTS PR02037 FPRL1 inhibitory protein signature 43 60 1.4E-47 T 28-03-2018 IPR023256 FPRL1 inhibitory protein RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 PRINTS PR02037 FPRL1 inhibitory protein signature 68 86 1.4E-47 T 28-03-2018 IPR023256 FPRL1 inhibitory protein RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 PRINTS PR02035 FPRL1/chemotaxis inhibitory protein signature 101 122 1.2E-39 T 28-03-2018 IPR023253 FPRL1/chemotaxis inhibitory protein RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 PRINTS PR02035 FPRL1/chemotaxis inhibitory protein signature 37 48 1.2E-39 T 28-03-2018 IPR023253 FPRL1/chemotaxis inhibitory protein RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 PRINTS PR02035 FPRL1/chemotaxis inhibitory protein signature 123 133 1.2E-39 T 28-03-2018 IPR023253 FPRL1/chemotaxis inhibitory protein RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 PRINTS PR02035 FPRL1/chemotaxis inhibitory protein signature 2 18 1.2E-39 T 28-03-2018 IPR023253 FPRL1/chemotaxis inhibitory protein RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 PRINTS PR02035 FPRL1/chemotaxis inhibitory protein signature 18 31 1.2E-39 T 28-03-2018 IPR023253 FPRL1/chemotaxis inhibitory protein RK98_RS12135 6a98216c308cfcafbc6510732df3c2a9 133 Pfam PF16104 Formyl peptide receptor-like 1 inhibitory protein 29 132 2.4E-69 T 28-03-2018 IPR023256 FPRL1 inhibitory protein RK98_RS02800 95acf586c04d76c20a37fa39e9f08e01 132 SUPERFAMILY SSF52374 1 125 2.82E-35 T 28-03-2018 RK98_RS02800 95acf586c04d76c20a37fa39e9f08e01 132 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 67 1.8E-22 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RK98_RS02800 95acf586c04d76c20a37fa39e9f08e01 132 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 126 1.4E-60 T 28-03-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 RK98_RS02800 95acf586c04d76c20a37fa39e9f08e01 132 Gene3D G3DSA:3.40.50.620 1 128 6.6E-31 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS02800 95acf586c04d76c20a37fa39e9f08e01 132 Pfam PF01467 Cytidylyltransferase-like 5 124 4.0E-23 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 RK98_RS09890 703c4da3ede35b1a0b0fa09aa9ac7583 163 Pfam PF03703 Bacterial PH domain 74 150 2.3E-19 T 28-03-2018 IPR005182 Domain of unknown function DUF304 RK98_RS11140 bcce4347f62a29e2216ce9329fc808e3 129 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 1 120 4.0E-62 T 28-03-2018 IPR010899 Protein of unknown function UPF0344 RK98_RS11140 bcce4347f62a29e2216ce9329fc808e3 129 Pfam PF07457 Protein of unknown function (DUF1516) 2 114 2.8E-35 T 28-03-2018 IPR010899 Protein of unknown function UPF0344 RK98_RS11140 bcce4347f62a29e2216ce9329fc808e3 129 Hamap MF_01536 UPF0344 protein . 1 124 15.732 T 28-03-2018 IPR010899 Protein of unknown function UPF0344 RK98_RS13455 bed98fc86ced713b1800c096ad102fcf 329 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 323 1.2E-113 T 28-03-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RK98_RS13455 bed98fc86ced713b1800c096ad102fcf 329 SMART SM00859 3 119 3.3E-25 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RK98_RS13455 bed98fc86ced713b1800c096ad102fcf 329 Gene3D G3DSA:3.30.360.10 137 306 2.5E-60 T 28-03-2018 RK98_RS13455 bed98fc86ced713b1800c096ad102fcf 329 Gene3D G3DSA:3.40.50.720 1 136 6.2E-29 T 28-03-2018 RK98_RS13455 bed98fc86ced713b1800c096ad102fcf 329 SUPERFAMILY SSF51735 1 152 8.23E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS13455 bed98fc86ced713b1800c096ad102fcf 329 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 135 309 4.4E-45 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 RK98_RS13455 bed98fc86ced713b1800c096ad102fcf 329 SUPERFAMILY SSF55347 125 310 5.5E-65 T 28-03-2018 RK98_RS13455 bed98fc86ced713b1800c096ad102fcf 329 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 323 32.866 T 28-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 RK98_RS13455 bed98fc86ced713b1800c096ad102fcf 329 PIRSF PIRSF000148 1 327 5.9E-112 T 28-03-2018 RK98_RS13455 bed98fc86ced713b1800c096ad102fcf 329 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 114 2.6E-28 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 RK98_RS13870 326942751468e60f0078ef53b99bd928 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 RK98_RS13870 326942751468e60f0078ef53b99bd928 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 5.7E-37 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 RK98_RS13870 326942751468e60f0078ef53b99bd928 90 Gene3D G3DSA:4.10.520.10 1 90 1.6E-38 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RK98_RS13870 326942751468e60f0078ef53b99bd928 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.8E-21 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 RK98_RS13870 326942751468e60f0078ef53b99bd928 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.8E-21 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 RK98_RS13870 326942751468e60f0078ef53b99bd928 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.8E-21 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 RK98_RS13870 326942751468e60f0078ef53b99bd928 90 SUPERFAMILY SSF47729 1 90 1.91E-35 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 RK98_RS13870 326942751468e60f0078ef53b99bd928 90 SMART SM00411 1 90 3.5E-51 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 RK98_RS14375 1c80251453d68978f5e14362ee8eabe7 134 Gene3D G3DSA:3.40.140.10 2 134 4.2E-45 T 28-03-2018 RK98_RS14375 1c80251453d68978f5e14362ee8eabe7 134 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 6 133 4.3E-51 T 28-03-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 RK98_RS14375 1c80251453d68978f5e14362ee8eabe7 134 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 6 104 5.3E-14 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain RK98_RS14375 1c80251453d68978f5e14362ee8eabe7 134 SUPERFAMILY SSF53927 6 133 3.41E-42 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 RK98_RS11760 81619a37a174dc89ea02b8595788e72d 220 Gene3D G3DSA:3.40.50.20 1 95 8.7E-21 T 28-03-2018 RK98_RS11760 81619a37a174dc89ea02b8595788e72d 220 SUPERFAMILY SSF116726 133 215 6.28E-21 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RK98_RS11760 81619a37a174dc89ea02b8595788e72d 220 SUPERFAMILY SSF51735 4 133 4.51E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS11760 81619a37a174dc89ea02b8595788e72d 220 Gene3D G3DSA:3.40.50.720 96 138 0.15 T 28-03-2018 RK98_RS11760 81619a37a174dc89ea02b8595788e72d 220 Pfam PF02254 TrkA-N domain 5 120 6.7E-30 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RK98_RS11760 81619a37a174dc89ea02b8595788e72d 220 Pfam PF02080 TrkA-C domain 150 217 8.4E-15 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RK98_RS11760 81619a37a174dc89ea02b8595788e72d 220 Gene3D G3DSA:3.30.70.1450 139 218 6.2E-22 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RK98_RS02440 692ad54395d9e3c6d2a2d8e6e48279a7 139 Gene3D G3DSA:3.30.479.10 3 137 4.1E-34 T 28-03-2018 RK98_RS02440 692ad54395d9e3c6d2a2d8e6e48279a7 139 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 16 106 2.0E-27 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 RK98_RS02440 692ad54395d9e3c6d2a2d8e6e48279a7 139 PIRSF PIRSF006113 13 136 3.8E-23 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 RK98_RS02440 692ad54395d9e3c6d2a2d8e6e48279a7 139 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 17 134 2.3E-30 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 RK98_RS02440 692ad54395d9e3c6d2a2d8e6e48279a7 139 SUPERFAMILY SSF55620 11 135 2.45E-33 T 28-03-2018 RK98_RS03055 1652ec9eada138bb7f8897f3329d4a56 113 Hamap MF_01863 UPF0741 protein . 1 74 33.048 T 28-03-2018 IPR020880 Protein of unknown function UPF0741 RK98_RS03055 1652ec9eada138bb7f8897f3329d4a56 113 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 13 74 0.002 T 28-03-2018 RK98_RS03055 1652ec9eada138bb7f8897f3329d4a56 113 Pfam PF07293 Protein of unknown function (DUF1450) 7 73 8.9E-8 T 28-03-2018 IPR009910 Protein of unknown function DUF1450 RK98_RS01790 7eb2b654bc449cda6936cbd283cbf79a 647 Gene3D G3DSA:1.10.287.510 301 444 0.0092 T 28-03-2018 RK98_RS01790 7eb2b654bc449cda6936cbd283cbf79a 647 Gene3D G3DSA:3.40.50.300 1 262 3.2E-14 T 28-03-2018 RK98_RS01790 7eb2b654bc449cda6936cbd283cbf79a 647 Pfam PF13476 AAA domain 5 280 5.1E-6 T 28-03-2018 RK98_RS01790 7eb2b654bc449cda6936cbd283cbf79a 647 SUPERFAMILY SSF52540 1 171 7.01E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11190 fa950af282e39707791ef40e32463650 171 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 27 166 4.5E-31 T 28-03-2018 IPR005247 YbhB/YbcL RK98_RS11190 fa950af282e39707791ef40e32463650 171 SUPERFAMILY SSF49777 9 163 1.57E-29 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein RK98_RS11190 fa950af282e39707791ef40e32463650 171 Gene3D G3DSA:3.90.280.10 1 167 1.8E-33 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein RK98_RS11190 fa950af282e39707791ef40e32463650 171 Pfam PF01161 Phosphatidylethanolamine-binding protein 29 164 4.3E-25 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein RK98_RS12000 4da9c490be8d0b007db94b6e10ea62ed 322 Gene3D G3DSA:1.10.3470.10 2 322 4.3E-57 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS12000 4da9c490be8d0b007db94b6e10ea62ed 322 Pfam PF01032 FecCD transport family 18 315 9.4E-74 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RK98_RS12000 4da9c490be8d0b007db94b6e10ea62ed 322 SUPERFAMILY SSF81345 4 315 1.31E-66 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS11825 0404fb74059e743e000f6d250eb2c4de 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 259 2.6E-10 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS11825 0404fb74059e743e000f6d250eb2c4de 265 SUPERFAMILY SSF161098 2 257 1.59E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS11825 0404fb74059e743e000f6d250eb2c4de 265 Gene3D G3DSA:1.10.3720.10 6 263 2.3E-34 T 28-03-2018 RK98_RS05540 728b13130f7cc573bc195494e8f851a8 254 PIRSF PIRSF016557 1 254 1.2E-102 T 28-03-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 RK98_RS05540 728b13130f7cc573bc195494e8f851a8 254 Gene3D G3DSA:3.20.20.140 1 240 1.9E-21 T 28-03-2018 RK98_RS05540 728b13130f7cc573bc195494e8f851a8 254 SUPERFAMILY SSF89550 1 201 6.87E-17 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RK98_RS14100 e9901e79cae05ddc755b3c79590a331d 326 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 151 314 5.3E-42 T 28-03-2018 IPR021062 Putative aromatic acid exporter, C-terminal RK98_RS14100 e9901e79cae05ddc755b3c79590a331d 326 Pfam PF06081 Aromatic acid exporter family member 1 8 147 1.2E-42 T 28-03-2018 IPR010343 Aromatic acid exporter family member 1 RK98_RS10625 cae7197d07787340cc72b332505f5a71 134 Gene3D G3DSA:3.40.91.30 14 132 2.3E-20 T 28-03-2018 RK98_RS10625 cae7197d07787340cc72b332505f5a71 134 Pfam PF06356 Protein of unknown function (DUF1064) 1 112 2.0E-44 T 28-03-2018 IPR009414 Protein of unknown function DUF1064 RK98_RS08525 b034a2b5c49dec91350ff868706d2453 305 Pfam PF01758 Sodium Bile acid symporter family 41 217 2.9E-45 T 28-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 RK98_RS08700 bd3d8d75398662597b9c65c856d8b9bb 136 Gene3D G3DSA:2.10.150.10 1 101 6.4E-45 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08700 bd3d8d75398662597b9c65c856d8b9bb 136 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 103 5.0E-45 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08700 bd3d8d75398662597b9c65c856d8b9bb 136 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.74 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08700 bd3d8d75398662597b9c65c856d8b9bb 136 Pfam PF00699 Urease beta subunit 3 99 1.5E-43 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08700 bd3d8d75398662597b9c65c856d8b9bb 136 SUPERFAMILY SSF51278 1 110 1.15E-47 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS15055 80e7bf5f40f128208d8a594b1e55e6d5 453 Gene3D G3DSA:1.10.287.90 334 397 5.5E-4 T 28-03-2018 RK98_RS15055 80e7bf5f40f128208d8a594b1e55e6d5 453 Pfam PF00324 Amino acid permease 13 444 3.1E-101 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RK98_RS15055 80e7bf5f40f128208d8a594b1e55e6d5 453 PIRSF PIRSF006060 1 452 1.5E-66 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS08975 8c9050889b80a8703ad85b4bc67139da 179 SUPERFAMILY SSF55282 3 179 6.36E-79 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08975 8c9050889b80a8703ad85b4bc67139da 179 Pfam PF00281 Ribosomal protein L5 24 80 9.0E-29 T 28-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08975 8c9050889b80a8703ad85b4bc67139da 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 28-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08975 8c9050889b80a8703ad85b4bc67139da 179 PIRSF PIRSF002161 1 179 3.8E-71 T 28-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08975 8c9050889b80a8703ad85b4bc67139da 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 4.1E-42 T 28-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08975 8c9050889b80a8703ad85b4bc67139da 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.171 T 28-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08975 8c9050889b80a8703ad85b4bc67139da 179 Gene3D G3DSA:3.30.1440.10 1 179 3.6E-81 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS11110 28dcc4cbf6270215fa4aa6d2ad34b661 191 Pfam PF09335 SNARE associated Golgi protein 34 152 2.6E-15 T 28-03-2018 IPR032816 SNARE associated Golgi protein RK98_RS15000 e5d2c947a48134d3cd0897686ce10005 156 Gene3D G3DSA:2.20.25.10 1 45 0.0018 T 28-03-2018 RK98_RS15000 e5d2c947a48134d3cd0897686ce10005 156 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 76.8 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RK98_RS15000 e5d2c947a48134d3cd0897686ce10005 156 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 2.9E-56 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 RK98_RS15000 e5d2c947a48134d3cd0897686ce10005 156 Pfam PF03477 ATP cone domain 50 136 8.3E-18 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 RK98_RS06790 227358006203dcc8c9ea2c0f390418ff 295 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 192 294 3.6E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06790 227358006203dcc8c9ea2c0f390418ff 295 PRINTS PR00344 Bacterial sensor protein C-terminal signature 256 274 1.6E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS06790 227358006203dcc8c9ea2c0f390418ff 295 PRINTS PR00344 Bacterial sensor protein C-terminal signature 222 236 1.6E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS06790 227358006203dcc8c9ea2c0f390418ff 295 PRINTS PR00344 Bacterial sensor protein C-terminal signature 280 293 1.6E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS06790 227358006203dcc8c9ea2c0f390418ff 295 Gene3D G3DSA:3.30.565.10 106 294 3.3E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06790 227358006203dcc8c9ea2c0f390418ff 295 SMART SM00387 188 295 2.0E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS06790 227358006203dcc8c9ea2c0f390418ff 295 SUPERFAMILY SSF55874 148 293 3.14E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS14335 97aebb73c79e818bdbb67fd1f4b18d1a 225 SUPERFAMILY SSF53335 14 139 2.83E-6 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS14335 97aebb73c79e818bdbb67fd1f4b18d1a 225 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 20 222 2.5E-80 T 28-03-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 RK98_RS14335 97aebb73c79e818bdbb67fd1f4b18d1a 225 Gene3D G3DSA:3.40.50.150 3 164 1.0E-12 T 28-03-2018 RK98_RS14335 97aebb73c79e818bdbb67fd1f4b18d1a 225 PIRSF PIRSF018637 2 225 1.3E-78 T 28-03-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 RK98_RS01835 ed755de327005589b26fb9892d347ec2 251 Pfam PF03374 Phage antirepressor protein KilAC domain 135 245 6.4E-33 T 28-03-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 RK98_RS01835 ed755de327005589b26fb9892d347ec2 251 Pfam PF08346 AntA/AntB antirepressor 26 96 1.7E-23 T 28-03-2018 IPR013557 AntA/AntB antirepressor RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 SUPERFAMILY SSF53067 196 361 4.9E-37 T 28-03-2018 RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 Gene3D G3DSA:3.30.420.40 193 246 3.1E-5 T 28-03-2018 RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 Pfam PF02491 SHS2 domain inserted in FTSA 84 158 5.5E-11 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 Gene3D G3DSA:3.90.640.10 247 296 2.4E-18 T 28-03-2018 RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 SUPERFAMILY SSF53067 5 187 9.55E-35 T 28-03-2018 RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 SMART SM00842 6 193 5.7E-46 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 Pfam PF14450 Cell division protein FtsA 203 364 6.1E-19 T 28-03-2018 RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 PIRSF PIRSF003101 1 469 2.6E-91 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 Hamap MF_02033 Cell division protein FtsA [ftsA]. 2 469 23.235 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 Gene3D G3DSA:3.30.420.40 1 183 8.5E-21 T 28-03-2018 RK98_RS12315 2b30f9e4ff19ee71fc0ee047314887ec 470 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 6 364 8.8E-82 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 RK98_RS13045 c3b87a65e1362eff8c9b9303b9f042a9 243 PIRSF PIRSF006648 3 243 4.3E-20 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 RK98_RS13045 c3b87a65e1362eff8c9b9303b9f042a9 243 Pfam PF12698 ABC-2 family transporter protein 47 229 4.5E-17 T 28-03-2018 RK98_RS03870 d1e39e92fe559f8735e90288841814e0 445 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 29 43 - T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RK98_RS03870 d1e39e92fe559f8735e90288841814e0 445 SUPERFAMILY SSF161070 6 444 1.44E-114 T 28-03-2018 RK98_RS03870 d1e39e92fe559f8735e90288841814e0 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 13 34 1.3E-16 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RK98_RS03870 d1e39e92fe559f8735e90288841814e0 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 294 314 1.3E-16 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RK98_RS03870 d1e39e92fe559f8735e90288841814e0 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 42 61 1.3E-16 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RK98_RS03870 d1e39e92fe559f8735e90288841814e0 445 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 88 114 1.3E-16 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RK98_RS03870 d1e39e92fe559f8735e90288841814e0 445 Pfam PF00209 Sodium:neurotransmitter symporter family 6 124 1.5E-19 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RK98_RS03870 d1e39e92fe559f8735e90288841814e0 445 Pfam PF00209 Sodium:neurotransmitter symporter family 154 443 1.3E-26 T 28-03-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 RK98_RS08660 7dc710f7293f7690b542699122b4bba3 108 Pfam PF14470 Bacterial PH domain 11 103 1.7E-13 T 28-03-2018 RK98_RS00100 24709559e88f365d182d34830689c3eb 256 Pfam PF01925 Sulfite exporter TauE/SafE 12 246 4.8E-39 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 RK98_RS09080 26e1808eb44e1a8e16ecff837ecd410b 132 SUPERFAMILY SSF54211 8 132 8.34E-48 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold RK98_RS09080 26e1808eb44e1a8e16ecff837ecd410b 132 ProSitePatterns PS00360 Ribosomal protein S9 signature. 71 89 - T 28-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 RK98_RS09080 26e1808eb44e1a8e16ecff837ecd410b 132 Gene3D G3DSA:3.30.230.10 5 132 9.8E-51 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup RK98_RS09080 26e1808eb44e1a8e16ecff837ecd410b 132 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 3 132 33.719 T 28-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid RK98_RS09080 26e1808eb44e1a8e16ecff837ecd410b 132 Pfam PF00380 Ribosomal protein S9/S16 12 132 9.4E-46 T 28-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 RK98_RS11335 4aa57c0114b5e0fa4b432ea082ea001e 614 Pfam PF00999 Sodium/hydrogen exchanger family 7 388 1.2E-77 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RK98_RS11335 4aa57c0114b5e0fa4b432ea082ea001e 614 SUPERFAMILY SSF51735 405 514 2.26E-11 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS11335 4aa57c0114b5e0fa4b432ea082ea001e 614 Pfam PF02080 TrkA-C domain 559 610 3.3E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RK98_RS11335 4aa57c0114b5e0fa4b432ea082ea001e 614 Gene3D G3DSA:3.30.70.1450 536 612 1.6E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RK98_RS11335 4aa57c0114b5e0fa4b432ea082ea001e 614 Gene3D G3DSA:1.20.91.10 240 321 4.7E-18 T 28-03-2018 RK98_RS11335 4aa57c0114b5e0fa4b432ea082ea001e 614 SUPERFAMILY SSF116726 540 611 1.44E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 RK98_RS11335 4aa57c0114b5e0fa4b432ea082ea001e 614 Gene3D G3DSA:3.40.50.720 404 522 3.5E-8 T 28-03-2018 RK98_RS11335 4aa57c0114b5e0fa4b432ea082ea001e 614 Pfam PF02254 TrkA-N domain 405 511 4.2E-6 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 RK98_RS09875 d2fd868f023d6113f21921992d916d0e 186 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 183 1.4E-49 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RK98_RS09875 d2fd868f023d6113f21921992d916d0e 186 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 184 27.617 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RK98_RS09875 d2fd868f023d6113f21921992d916d0e 186 PIRSF PIRSF001296 1 186 1.2E-64 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RK98_RS09875 d2fd868f023d6113f21921992d916d0e 186 Pfam PF02669 K+-transporting ATPase, c chain 5 183 3.1E-57 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RK98_RS14055 19473940e9dc4e8ea9eeeed4778a6284 297 Gene3D G3DSA:3.90.1240.10 4 129 3.7E-18 T 28-03-2018 RK98_RS14055 19473940e9dc4e8ea9eeeed4778a6284 297 Gene3D G3DSA:3.20.80.10 130 290 2.3E-13 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain RK98_RS14055 19473940e9dc4e8ea9eeeed4778a6284 297 SUPERFAMILY SSF55136 139 290 7.85E-14 T 28-03-2018 RK98_RS14055 19473940e9dc4e8ea9eeeed4778a6284 297 Pfam PF14526 Integron-associated effector binding protein 140 289 3.9E-22 T 28-03-2018 IPR029441 Integron-associated effector binding protein RK98_RS14055 19473940e9dc4e8ea9eeeed4778a6284 297 SUPERFAMILY SSF46689 14 63 1.88E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS14055 19473940e9dc4e8ea9eeeed4778a6284 297 SMART SM00871 137 290 9.6E-10 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding RK98_RS14055 19473940e9dc4e8ea9eeeed4778a6284 297 SMART SM00342 30 113 3.2E-11 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS14055 19473940e9dc4e8ea9eeeed4778a6284 297 Pfam PF12833 Helix-turn-helix domain 36 111 7.9E-12 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS06310 cab8e59827818680ed79454e4c87b542 370 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 367 5.8E-143 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RK98_RS06310 cab8e59827818680ed79454e4c87b542 370 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 370 103.181 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 RK98_RS06310 cab8e59827818680ed79454e4c87b542 370 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 RK98_RS06310 cab8e59827818680ed79454e4c87b542 370 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 RK98_RS06310 cab8e59827818680ed79454e4c87b542 370 SUPERFAMILY SSF52540 244 352 4.56E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06310 cab8e59827818680ed79454e4c87b542 370 SUPERFAMILY SSF52540 1 217 4.56E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06310 cab8e59827818680ed79454e4c87b542 370 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 347 3.3E-16 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal RK98_RS06310 cab8e59827818680ed79454e4c87b542 370 Gene3D G3DSA:3.40.50.300 1 370 1.7E-34 T 28-03-2018 RK98_RS09525 f4e9767a0cce8b7d0ce0e4c9b4927e1d 236 SUPERFAMILY SSF53167 5 235 6.68E-90 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RK98_RS09525 f4e9767a0cce8b7d0ce0e4c9b4927e1d 236 Pfam PF01048 Phosphorylase superfamily 18 226 2.0E-37 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 RK98_RS09525 f4e9767a0cce8b7d0ce0e4c9b4927e1d 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 7 235 3.2E-93 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 RK98_RS09525 f4e9767a0cce8b7d0ce0e4c9b4927e1d 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 4 236 41.332 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 RK98_RS09525 f4e9767a0cce8b7d0ce0e4c9b4927e1d 236 Gene3D G3DSA:3.40.50.1580 12 235 1.3E-52 T 28-03-2018 RK98_RS09525 f4e9767a0cce8b7d0ce0e4c9b4927e1d 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS07885 122e438e32d09fd96738bcc88e333a07 219 Gene3D G3DSA:1.20.120.20 101 213 3.4E-5 T 28-03-2018 RK98_RS05575 c87bd0a62a7ca9a5df5fb7ff4d0cdf69 514 SUPERFAMILY SSF52317 266 327 2.29E-9 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS05575 c87bd0a62a7ca9a5df5fb7ff4d0cdf69 514 SUPERFAMILY SSF52317 192 236 2.29E-9 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS05575 c87bd0a62a7ca9a5df5fb7ff4d0cdf69 514 SUPERFAMILY SSF52317 36 150 2.29E-9 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS05575 c87bd0a62a7ca9a5df5fb7ff4d0cdf69 514 Gene3D G3DSA:3.40.50.880 30 346 4.0E-35 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS11310 e4bfdc1dfc5e4ae5d7a5d4d1ad90dc93 115 Hamap MF_01861 UPF0738 protein . 1 113 26.408 T 28-03-2018 IPR020908 Uncharacterised protein family UPF0738 RK98_RS05660 46f9a464433feb64d642837b9e019ed7 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 7 245 5.5E-62 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 RK98_RS05660 46f9a464433feb64d642837b9e019ed7 326 Gene3D G3DSA:3.90.25.10 172 325 6.9E-38 T 28-03-2018 RK98_RS05660 46f9a464433feb64d642837b9e019ed7 326 Gene3D G3DSA:3.40.50.720 2 171 2.2E-29 T 28-03-2018 RK98_RS05660 46f9a464433feb64d642837b9e019ed7 326 SUPERFAMILY SSF51735 6 315 8.34E-88 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS12305 d5f5d06c973cae20648bb45b596a3b75 449 Pfam PF08245 Mur ligase middle domain 116 287 1.7E-33 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS12305 d5f5d06c973cae20648bb45b596a3b75 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 375 4.5E-9 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RK98_RS12305 d5f5d06c973cae20648bb45b596a3b75 449 Gene3D G3DSA:3.90.190.20 312 444 5.2E-34 T 28-03-2018 RK98_RS12305 d5f5d06c973cae20648bb45b596a3b75 449 Gene3D G3DSA:3.40.50.720 3 100 4.6E-14 T 28-03-2018 RK98_RS12305 d5f5d06c973cae20648bb45b596a3b75 449 SUPERFAMILY SSF53244 307 443 7.32E-40 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 RK98_RS12305 d5f5d06c973cae20648bb45b596a3b75 449 Gene3D G3DSA:3.40.1190.10 101 305 5.4E-50 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS12305 d5f5d06c973cae20648bb45b596a3b75 449 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 445 34.545 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS12305 d5f5d06c973cae20648bb45b596a3b75 449 SUPERFAMILY SSF53623 102 305 3.92E-51 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 RK98_RS12305 d5f5d06c973cae20648bb45b596a3b75 449 SUPERFAMILY SSF51984 7 99 2.35E-15 T 28-03-2018 RK98_RS12305 d5f5d06c973cae20648bb45b596a3b75 449 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 443 9.7E-125 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS14025 15c792a67979d720c58ed2854e4f5ff7 302 Gene3D G3DSA:3.20.20.100 1 299 5.8E-64 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS14025 15c792a67979d720c58ed2854e4f5ff7 302 Pfam PF00248 Aldo/keto reductase family 14 284 7.9E-52 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS14025 15c792a67979d720c58ed2854e4f5ff7 302 SUPERFAMILY SSF51430 1 283 1.83E-65 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS01315 b66f33c613cec5bd3922799d55ca0c66 485 ProSitePatterns PS00571 Amidases signature. 152 183 - T 28-03-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 RK98_RS01315 b66f33c613cec5bd3922799d55ca0c66 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 14 475 4.3E-198 T 28-03-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RK98_RS01315 b66f33c613cec5bd3922799d55ca0c66 485 SUPERFAMILY SSF75304 1 480 2.75E-158 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RK98_RS01315 b66f33c613cec5bd3922799d55ca0c66 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 92.089 T 28-03-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RK98_RS01315 b66f33c613cec5bd3922799d55ca0c66 485 Pfam PF01425 Amidase 24 465 5.6E-158 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RK98_RS01315 b66f33c613cec5bd3922799d55ca0c66 485 Gene3D G3DSA:3.90.1300.10 1 485 1.6E-167 T 28-03-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 RK98_RS02040 f070bb7651bee94eb03622cf66559388 246 PIRSF PIRSF017388 1 244 3.4E-84 T 28-03-2018 IPR012354 Esterase/lipase GO:0052689 RK98_RS02040 f070bb7651bee94eb03622cf66559388 246 SUPERFAMILY SSF53474 13 242 7.19E-33 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS02040 f070bb7651bee94eb03622cf66559388 246 Pfam PF12146 Serine aminopeptidase, S33 15 226 1.0E-15 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 RK98_RS02040 f070bb7651bee94eb03622cf66559388 246 Gene3D G3DSA:3.40.50.1820 1 244 6.3E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS11255 5142dfa4c168fdf76f233fcf82ea7f24 326 Gene3D G3DSA:3.40.50.300 1 325 1.2E-82 T 28-03-2018 RK98_RS11255 5142dfa4c168fdf76f233fcf82ea7f24 326 Pfam PF00005 ABC transporter 31 181 4.4E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS11255 5142dfa4c168fdf76f233fcf82ea7f24 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 2.9E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RK98_RS11255 5142dfa4c168fdf76f233fcf82ea7f24 326 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS11255 5142dfa4c168fdf76f233fcf82ea7f24 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 2.9E-32 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RK98_RS11255 5142dfa4c168fdf76f233fcf82ea7f24 326 SUPERFAMILY SSF52540 4 253 7.18E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11255 5142dfa4c168fdf76f233fcf82ea7f24 326 SMART SM00382 39 247 1.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS04540 9e2538cc13fea5caf3fadc81ef6aea28 188 SUPERFAMILY SSF52218 1 173 3.11E-28 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS04540 9e2538cc13fea5caf3fadc81ef6aea28 188 Pfam PF03358 NADPH-dependent FMN reductase 1 142 4.1E-26 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RK98_RS04540 9e2538cc13fea5caf3fadc81ef6aea28 188 Gene3D G3DSA:3.40.50.360 1 178 5.2E-28 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS11315 1b8a7cfc73f3027730b2a00fba2e4949 211 SUPERFAMILY SSF81301 3 199 2.78E-59 T 28-03-2018 RK98_RS11315 1b8a7cfc73f3027730b2a00fba2e4949 211 Pfam PF04607 Region found in RelA / SpoT proteins 43 162 2.1E-36 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 RK98_RS11315 1b8a7cfc73f3027730b2a00fba2e4949 211 Gene3D G3DSA:1.10.287.860 147 195 3.0E-20 T 28-03-2018 RK98_RS11315 1b8a7cfc73f3027730b2a00fba2e4949 211 Gene3D G3DSA:3.30.460.10 1 145 2.8E-36 T 28-03-2018 RK98_RS11315 1b8a7cfc73f3027730b2a00fba2e4949 211 SMART SM00954 43 164 5.2E-41 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 RK98_RS03640 2a693b911c7ac1cfb4306ded9816361f 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 28-03-2018 IPR019897 RidA, conserved site RK98_RS03640 2a693b911c7ac1cfb4306ded9816361f 126 SUPERFAMILY SSF55298 2 121 5.18E-46 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RK98_RS03640 2a693b911c7ac1cfb4306ded9816361f 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 120 4.7E-51 T 28-03-2018 IPR006056 RidA family RK98_RS03640 2a693b911c7ac1cfb4306ded9816361f 126 Gene3D G3DSA:3.30.1330.40 1 125 9.8E-44 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like RK98_RS03640 2a693b911c7ac1cfb4306ded9816361f 126 Pfam PF01042 Endoribonuclease L-PSP 9 120 2.7E-44 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family RK98_RS04960 0c84a2b2c33e5580d0d43e3d9ac0fe6c 233 Pfam PF04172 LrgB-like family 17 230 9.8E-66 T 28-03-2018 IPR007300 CidB/LrgB family RK98_RS04960 0c84a2b2c33e5580d0d43e3d9ac0fe6c 233 Hamap MF_01142 Antiholin-like protein LrgB [lrgB]. 4 233 35.564 T 28-03-2018 IPR024891 Antiholin-like protein LrgB RK98_RS00515 a08be5e89dad610d47be5b58d7355687 157 PRINTS PR00502 NUDIX hydrolase family signature 47 61 4.7E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RK98_RS00515 a08be5e89dad610d47be5b58d7355687 157 PRINTS PR00502 NUDIX hydrolase family signature 61 76 4.7E-5 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 RK98_RS00515 a08be5e89dad610d47be5b58d7355687 157 Pfam PF00293 NUDIX domain 34 106 9.5E-11 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RK98_RS00515 a08be5e89dad610d47be5b58d7355687 157 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 RK98_RS00515 a08be5e89dad610d47be5b58d7355687 157 SUPERFAMILY SSF55811 27 121 5.01E-18 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 RK98_RS00515 a08be5e89dad610d47be5b58d7355687 157 Gene3D G3DSA:3.90.79.10 1 124 1.1E-17 T 28-03-2018 RK98_RS00515 a08be5e89dad610d47be5b58d7355687 157 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 2 155 3.5E-69 T 28-03-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 RK98_RS05820 ec37459df52a88b811ec211cdbff5c01 256 Pfam PF04507 Csa1 family 3 254 1.9E-125 T 28-03-2018 IPR007595 Csa1 family RK98_RS05820 ec37459df52a88b811ec211cdbff5c01 256 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 3 252 6.0E-113 T 28-03-2018 IPR007595 Csa1 family RK98_RS09165 19091d061895be76d13a0151dbc9c311 138 Gene3D G3DSA:1.10.1660.10 56 138 4.0E-9 T 28-03-2018 RK98_RS09165 19091d061895be76d13a0151dbc9c311 138 SMART SM00422 1 70 1.5E-16 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS09165 19091d061895be76d13a0151dbc9c311 138 SUPERFAMILY SSF46955 1 117 5.49E-26 T 28-03-2018 IPR009061 Putative DNA-binding domain RK98_RS09165 19091d061895be76d13a0151dbc9c311 138 Gene3D G3DSA:1.10.1660.10 1 55 1.6E-18 T 28-03-2018 RK98_RS09165 19091d061895be76d13a0151dbc9c311 138 Pfam PF13411 MerR HTH family regulatory protein 1 63 2.3E-16 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS01190 a249df6646ad9c7dc45475e0df1c8dcf 66 Pfam PF06569 Protein of unknown function (DUF1128) 5 65 1.1E-23 T 28-03-2018 IPR009507 Protein of unknown function UPF0435 RK98_RS11645 e0e8546d8da9863456ef511074327535 234 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 4 214 1.6E-70 T 28-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 RK98_RS11645 e0e8546d8da9863456ef511074327535 234 ProSitePatterns PS01057 SAICAR synthetase signature 1. 83 97 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS11645 e0e8546d8da9863456ef511074327535 234 SUPERFAMILY SSF56104 1 231 3.92E-78 T 28-03-2018 RK98_RS11645 e0e8546d8da9863456ef511074327535 234 Gene3D G3DSA:3.30.200.20 1 90 1.2E-26 T 28-03-2018 RK98_RS11645 e0e8546d8da9863456ef511074327535 234 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 1 232 31.534 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS11645 e0e8546d8da9863456ef511074327535 234 Pfam PF01259 SAICAR synthetase 4 224 8.3E-63 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS11645 e0e8546d8da9863456ef511074327535 234 ProSitePatterns PS01058 SAICAR synthetase signature 2. 170 178 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 RK98_RS11645 e0e8546d8da9863456ef511074327535 234 Gene3D G3DSA:3.30.470.20 91 218 1.2E-48 T 28-03-2018 RK98_RS11390 fd037dfed5cb091a124158e82993be80 267 Gene3D G3DSA:1.20.1250.20 138 267 0.21 T 28-03-2018 RK98_RS11390 fd037dfed5cb091a124158e82993be80 267 Gene3D G3DSA:1.20.1250.20 6 115 0.0045 T 28-03-2018 RK98_RS11390 fd037dfed5cb091a124158e82993be80 267 Pfam PF03741 Integral membrane protein TerC family 17 218 6.1E-52 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 RK98_RS11390 fd037dfed5cb091a124158e82993be80 267 SUPERFAMILY SSF103473 10 257 3.27E-7 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS11390 fd037dfed5cb091a124158e82993be80 267 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 14 259 1.6E-89 T 28-03-2018 IPR022493 Integral membrane YkoY RK98_RS05760 b637c5a428759b252a66e60dabdcd366 530 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 13 526 2.7E-157 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RK98_RS05760 b637c5a428759b252a66e60dabdcd366 530 Pfam PF02652 L-lactate permease 14 525 1.0E-160 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 RK98_RS07450 06a4f478c99de9a7219a2a6304610c2f 230 Pfam PF04607 Region found in RelA / SpoT proteins 77 198 1.7E-37 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 RK98_RS07450 06a4f478c99de9a7219a2a6304610c2f 230 Gene3D G3DSA:3.30.460.10 37 181 6.1E-36 T 28-03-2018 RK98_RS07450 06a4f478c99de9a7219a2a6304610c2f 230 SMART SM00954 77 200 4.6E-41 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 RK98_RS07450 06a4f478c99de9a7219a2a6304610c2f 230 Gene3D G3DSA:1.10.287.860 183 230 2.5E-14 T 28-03-2018 RK98_RS07450 06a4f478c99de9a7219a2a6304610c2f 230 SUPERFAMILY SSF81301 39 229 1.49E-52 T 28-03-2018 RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 237 345 1.6E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 SMART SM00388 122 189 1.4E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 273 287 5.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 345 5.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 326 5.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 301 5.7E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 SUPERFAMILY SSF55874 191 344 1.83E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 SUPERFAMILY SSF47384 106 189 8.44E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 SMART SM00387 234 348 5.8E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 Gene3D G3DSA:1.10.287.130 105 183 6.0E-13 T 28-03-2018 RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 Pfam PF00512 His Kinase A (phospho-acceptor) domain 123 182 1.6E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 RK98_RS02470 52ceeed71d16704966cc06e6e2e20b78 351 Gene3D G3DSA:3.30.565.10 195 346 2.0E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS08680 dfe84ebb2b2ee325e52aa10666c77407 204 Hamap MF_01389 Urease accessory protein UreG [ureG]. 3 201 45.136 T 28-03-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RK98_RS08680 dfe84ebb2b2ee325e52aa10666c77407 204 PIRSF PIRSF005624 2 202 3.1E-48 T 28-03-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 RK98_RS08680 dfe84ebb2b2ee325e52aa10666c77407 204 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 5 201 2.2E-94 T 28-03-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 RK98_RS08680 dfe84ebb2b2ee325e52aa10666c77407 204 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 176 2.5E-38 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain RK98_RS08680 dfe84ebb2b2ee325e52aa10666c77407 204 Gene3D G3DSA:3.40.50.300 5 181 1.7E-16 T 28-03-2018 RK98_RS08680 dfe84ebb2b2ee325e52aa10666c77407 204 SUPERFAMILY SSF52540 3 196 2.7E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS10410 5a7e97c8ca3abd3edb61b8d9a6a4281f 126 Gene3D G3DSA:2.40.50.100 5 126 6.3E-50 T 28-03-2018 RK98_RS10410 5a7e97c8ca3abd3edb61b8d9a6a4281f 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 RK98_RS10410 5a7e97c8ca3abd3edb61b8d9a6a4281f 126 SUPERFAMILY SSF51230 3 125 1.09E-46 T 28-03-2018 IPR011053 Single hybrid motif RK98_RS10410 5a7e97c8ca3abd3edb61b8d9a6a4281f 126 Pfam PF01597 Glycine cleavage H-protein 7 124 1.0E-49 T 28-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate RK98_RS10410 5a7e97c8ca3abd3edb61b8d9a6a4281f 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 41.332 T 28-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 RK98_RS10410 5a7e97c8ca3abd3edb61b8d9a6a4281f 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 1.0E-55 T 28-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 Pfam PF00106 short chain dehydrogenase 3 187 5.4E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 Gene3D G3DSA:3.40.50.720 1 234 3.4E-48 T 28-03-2018 RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 SUPERFAMILY SSF51735 2 233 5.18E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.0E-23 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 130 2.4E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 142 161 2.4E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS12820 73cfbd966775527c7c668ffda7c6e007 234 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 69 80 2.4E-5 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS11520 544bbe8384857438a11c12545e188daf 403 Gene3D G3DSA:3.60.120.10 1 398 1.4E-85 T 28-03-2018 IPR005801 ADC synthase GO:0009058 RK98_RS11520 544bbe8384857438a11c12545e188daf 403 SUPERFAMILY SSF56322 6 399 1.07E-90 T 28-03-2018 IPR005801 ADC synthase GO:0009058 RK98_RS11520 544bbe8384857438a11c12545e188daf 403 Pfam PF00425 chorismate binding enzyme 137 387 3.0E-64 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal RK98_RS11520 544bbe8384857438a11c12545e188daf 403 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 53 395 4.1E-124 T 28-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 RK98_RS02145 c8d54f5c6177a4b9c3912347ab887fad 161 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 106 141 3.3E-13 T 28-03-2018 IPR001451 Hexapeptide repeat RK98_RS02145 c8d54f5c6177a4b9c3912347ab887fad 161 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 115 143 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 RK98_RS02145 c8d54f5c6177a4b9c3912347ab887fad 161 Gene3D G3DSA:2.160.10.10 2 161 2.1E-29 T 28-03-2018 RK98_RS02145 c8d54f5c6177a4b9c3912347ab887fad 161 SUPERFAMILY SSF51161 12 157 8.18E-34 T 28-03-2018 IPR011004 Trimeric LpxA-like RK98_RS09995 61028f25b789995a8850c1e17556f221 348 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 346 45.851 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 RK98_RS09995 61028f25b789995a8850c1e17556f221 348 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 339 1.8E-123 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RK98_RS09995 61028f25b789995a8850c1e17556f221 348 SMART SM01329 4 342 1.9E-173 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RK98_RS09995 61028f25b789995a8850c1e17556f221 348 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 339 1.4E-142 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 RK98_RS09995 61028f25b789995a8850c1e17556f221 348 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 237 256 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 RK98_RS09995 61028f25b789995a8850c1e17556f221 348 SUPERFAMILY SSF53659 3 345 2.3E-115 T 28-03-2018 RK98_RS09995 61028f25b789995a8850c1e17556f221 348 Gene3D G3DSA:3.40.718.10 1 348 5.6E-119 T 28-03-2018 RK98_RS14790 748cdcef602c7313c20f948d1c3aa289 280 Pfam PF04085 rod shape-determining protein MreC 114 265 1.3E-39 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 RK98_RS14790 748cdcef602c7313c20f948d1c3aa289 280 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 8 271 2.1E-43 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 RK98_RS14790 748cdcef602c7313c20f948d1c3aa289 280 Gene3D G3DSA:1.20.5.170 67 208 4.0E-4 T 28-03-2018 RK98_RS14790 748cdcef602c7313c20f948d1c3aa289 280 PIRSF PIRSF038471 2 278 7.0E-55 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 Gene3D G3DSA:3.30.1550.10 3 71 1.8E-36 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 SUPERFAMILY SSF54747 3 72 2.62E-30 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 3.8E-25 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 6.6E-65 T 28-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 140 - T 28-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 140 30.815 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 SMART SM00649 9 140 1.1E-86 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 1.7E-31 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 SUPERFAMILY SSF46906 67 140 4.19E-27 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 9.0E-17 T 28-03-2018 RK98_RS03350 d97776c8b8417e96b46402dc9887b4d1 140 Gene3D G3DSA:1.10.10.250 72 140 4.3E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 RK98_RS14425 5b6bc26d5e40ffe51993466efaf3a3f2 312 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 309 34.134 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RK98_RS14425 5b6bc26d5e40ffe51993466efaf3a3f2 312 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 309 3.5E-106 T 28-03-2018 RK98_RS14425 5b6bc26d5e40ffe51993466efaf3a3f2 312 SUPERFAMILY SSF53335 51 308 5.48E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS14425 5b6bc26d5e40ffe51993466efaf3a3f2 312 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 303 2.4E-77 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RK98_RS14425 5b6bc26d5e40ffe51993466efaf3a3f2 312 Gene3D G3DSA:3.40.50.150 114 312 3.4E-41 T 28-03-2018 RK98_RS14425 5b6bc26d5e40ffe51993466efaf3a3f2 312 PIRSF PIRSF000401 1 311 9.8E-111 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 RK98_RS05125 1ebb2c3f2f097cdb6a9fdc77253c4ae1 501 Pfam PF00501 AMP-binding enzyme 14 399 7.4E-99 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 RK98_RS05125 1ebb2c3f2f097cdb6a9fdc77253c4ae1 501 ProSitePatterns PS00455 Putative AMP-binding domain signature. 155 166 - T 28-03-2018 IPR020845 AMP-binding, conserved site RK98_RS05125 1ebb2c3f2f097cdb6a9fdc77253c4ae1 501 Gene3D G3DSA:3.30.300.30 393 498 2.4E-25 T 28-03-2018 RK98_RS05125 1ebb2c3f2f097cdb6a9fdc77253c4ae1 501 Gene3D G3DSA:2.30.38.10 311 392 5.3E-26 T 28-03-2018 RK98_RS05125 1ebb2c3f2f097cdb6a9fdc77253c4ae1 501 Gene3D G3DSA:3.40.50.980 161 310 8.6E-38 T 28-03-2018 RK98_RS05125 1ebb2c3f2f097cdb6a9fdc77253c4ae1 501 Pfam PF13193 AMP-binding enzyme C-terminal domain 408 483 1.3E-13 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain RK98_RS05125 1ebb2c3f2f097cdb6a9fdc77253c4ae1 501 SUPERFAMILY SSF56801 7 495 6.02E-139 T 28-03-2018 RK98_RS05125 1ebb2c3f2f097cdb6a9fdc77253c4ae1 501 Gene3D G3DSA:3.40.50.980 3 160 1.7E-41 T 28-03-2018 RK98_RS07500 71bbd7317778edf317039d2688fb66ee 288 Pfam PF00483 Nucleotidyl transferase 6 259 3.1E-36 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 RK98_RS07500 71bbd7317778edf317039d2688fb66ee 288 Gene3D G3DSA:3.90.550.10 2 277 5.3E-64 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS07500 71bbd7317778edf317039d2688fb66ee 288 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 8.0E-121 T 28-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 RK98_RS07500 71bbd7317778edf317039d2688fb66ee 288 SUPERFAMILY SSF53448 3 268 5.2E-71 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS04740 8ec461f60ebaeae9b42e94c9aa773e1c 274 Pfam PF01226 Formate/nitrite transporter 35 263 1.6E-48 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 RK98_RS04740 8ec461f60ebaeae9b42e94c9aa773e1c 274 Gene3D G3DSA:1.20.1080.10 14 274 2.2E-55 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RK98_RS09610 f28f8cbcf23a80a2b11c8e79f372cceb 475 Gene3D G3DSA:3.40.605.10 1 259 1.5E-86 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RK98_RS09610 f28f8cbcf23a80a2b11c8e79f372cceb 475 SUPERFAMILY SSF53720 4 470 1.7E-153 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RK98_RS09610 f28f8cbcf23a80a2b11c8e79f372cceb 475 PIRSF PIRSF036492 23 474 9.3E-85 T 28-03-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 RK98_RS09610 f28f8cbcf23a80a2b11c8e79f372cceb 475 Pfam PF00171 Aldehyde dehydrogenase family 13 470 5.0E-166 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RK98_RS09610 f28f8cbcf23a80a2b11c8e79f372cceb 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RK98_RS09610 f28f8cbcf23a80a2b11c8e79f372cceb 475 Gene3D G3DSA:3.40.309.10 260 456 1.1E-72 T 28-03-2018 RK98_RS09610 f28f8cbcf23a80a2b11c8e79f372cceb 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RK98_RS04760 2cb123f738052511594f103a4211c376 166 Gene3D G3DSA:3.30.500.20 4 116 1.2E-33 T 28-03-2018 RK98_RS04760 2cb123f738052511594f103a4211c376 166 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 157 2.6E-74 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04760 2cb123f738052511594f103a4211c376 166 Pfam PF04634 Protein of unknown function, DUF600 7 151 1.0E-48 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04760 2cb123f738052511594f103a4211c376 166 SUPERFAMILY SSF160424 3 165 6.41E-59 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS05295 2573a83748b76b52a0b15c5a53f16ae0 73 Pfam PF16942 Putative cyclic bacteriocin 2 73 2.0E-11 T 28-03-2018 IPR031608 Putative cyclic bacteriocin RK98_RS05295 2573a83748b76b52a0b15c5a53f16ae0 73 Gene3D G3DSA:1.20.225.10 6 73 1.2E-4 T 28-03-2018 RK98_RS13335 16fd50e968e920c5e8c43560a5d7facb 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 59 383 4.3E-39 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS13335 16fd50e968e920c5e8c43560a5d7facb 404 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 13 395 1.5E-195 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RK98_RS13335 16fd50e968e920c5e8c43560a5d7facb 404 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 87 101 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RK98_RS13335 16fd50e968e920c5e8c43560a5d7facb 404 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 8 396 50.425 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RK98_RS13335 16fd50e968e920c5e8c43560a5d7facb 404 SUPERFAMILY SSF53686 11 395 3.93E-138 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS13335 16fd50e968e920c5e8c43560a5d7facb 404 Gene3D G3DSA:3.40.50.1100 204 404 8.2E-36 T 28-03-2018 RK98_RS13335 16fd50e968e920c5e8c43560a5d7facb 404 Gene3D G3DSA:3.40.50.1100 15 70 3.4E-9 T 28-03-2018 RK98_RS13335 16fd50e968e920c5e8c43560a5d7facb 404 Gene3D G3DSA:3.40.50.1100 71 203 6.4E-37 T 28-03-2018 RK98_RS13335 16fd50e968e920c5e8c43560a5d7facb 404 PIRSF PIRSF001413 1 401 3.2E-161 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 RK98_RS11460 b92e70ad172c08621cb1c78943d86a5c 654 Pfam PF07242 Protein of unknown function (DUF1430) 555 653 5.7E-13 T 28-03-2018 IPR006541 Bacteriocin-associated integral membrane protein RK98_RS11460 b92e70ad172c08621cb1c78943d86a5c 654 PIRSF PIRSF031601 1 654 1.7E-198 T 28-03-2018 IPR016976 Uncharacterised conserved protein UCP031601 RK98_RS11460 b92e70ad172c08621cb1c78943d86a5c 654 TIGRFAM TIGR01654 bact_immun_7tm: bacteriocin-associated integral membrane protein 1 654 1.0E-220 T 28-03-2018 IPR006541 Bacteriocin-associated integral membrane protein RK98_RS01350 336463e0a026980b36fa59cc659ba292 100 SUPERFAMILY SSF48295 3 95 5.75E-31 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 RK98_RS01350 336463e0a026980b36fa59cc659ba292 100 Gene3D G3DSA:1.10.1270.10 1 100 1.5E-34 T 28-03-2018 RK98_RS01350 336463e0a026980b36fa59cc659ba292 100 Pfam PF01371 Trp repressor protein 10 94 2.5E-34 T 28-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 RK98_RS01350 336463e0a026980b36fa59cc659ba292 100 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 7.8E-49 T 28-03-2018 IPR013368 TrpR homologue YerC/YecD RK98_RS01350 336463e0a026980b36fa59cc659ba292 100 PIRSF PIRSF012508 1 100 2.5E-46 T 28-03-2018 IPR013368 TrpR homologue YerC/YecD RK98_RS09030 c3423f37600fda3da7fa9fb4ac34a662 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 28-03-2018 RK98_RS09030 c3423f37600fda3da7fa9fb4ac34a662 37 SUPERFAMILY SSF57840 1 37 4.19E-17 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09030 c3423f37600fda3da7fa9fb4ac34a662 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.676 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09030 c3423f37600fda3da7fa9fb4ac34a662 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 3.3E-24 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09030 c3423f37600fda3da7fa9fb4ac34a662 37 Pfam PF00444 Ribosomal protein L36 1 37 1.2E-19 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS09030 c3423f37600fda3da7fa9fb4ac34a662 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS12090 d9b5d0161904d2d603e5063afd621698 204 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 92 192 6.0E-13 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RK98_RS12090 d9b5d0161904d2d603e5063afd621698 204 Gene3D G3DSA:1.20.1300.10 1 204 1.0E-47 T 28-03-2018 RK98_RS12090 d9b5d0161904d2d603e5063afd621698 204 SUPERFAMILY SSF81343 3 204 3.92E-59 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 RK98_RS12090 d9b5d0161904d2d603e5063afd621698 204 PIRSF PIRSF000170 2 204 1.6E-101 T 28-03-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute RK98_RS12090 d9b5d0161904d2d603e5063afd621698 204 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 7 203 2.3E-42 T 28-03-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit RK98_RS10235 47d8d437a34ee59c58b7dc359fddc0ce 113 Gene3D G3DSA:1.10.10.10 41 113 2.0E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS01935 47d8d437a34ee59c58b7dc359fddc0ce 113 Gene3D G3DSA:1.10.10.10 41 113 2.0E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS09520 0c167e769cdabe1d5fdbd0438362659b 147 ProSitePatterns PS00818 Dps protein family signature 1. 29 45 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 RK98_RS09520 0c167e769cdabe1d5fdbd0438362659b 147 PIRSF PIRSF005900 1 147 1.1E-50 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RK98_RS09520 0c167e769cdabe1d5fdbd0438362659b 147 SUPERFAMILY SSF47240 4 146 9.08E-47 T 28-03-2018 IPR009078 Ferritin-like superfamily RK98_RS09520 0c167e769cdabe1d5fdbd0438362659b 147 Pfam PF00210 Ferritin-like domain 9 146 6.7E-32 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 RK98_RS09520 0c167e769cdabe1d5fdbd0438362659b 147 Gene3D G3DSA:1.20.1260.10 1 147 2.4E-47 T 28-03-2018 IPR012347 Ferritin-related RK98_RS09520 0c167e769cdabe1d5fdbd0438362659b 147 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 29 45 3.9E-14 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RK98_RS09520 0c167e769cdabe1d5fdbd0438362659b 147 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 53 69 3.9E-14 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RK98_RS09520 0c167e769cdabe1d5fdbd0438362659b 147 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 124 142 3.9E-14 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 Gene3D G3DSA:3.40.190.80 149 275 1.3E-25 T 28-03-2018 RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 SUPERFAMILY SSF56655 3 251 2.23E-71 T 28-03-2018 RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 1.1E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 58 74 1.1E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 1.1E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 173 194 1.1E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 204 228 1.1E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 1.1E-32 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 Pfam PF00459 Inositol monophosphatase family 4 249 1.3E-54 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 RK98_RS11860 5a62caf61659dad7576fc335fc0e270a 275 Gene3D G3DSA:3.30.540.10 1 148 1.4E-40 T 28-03-2018 RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 ProSitePatterns PS00277 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin signature 1. 103 112 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 Gene3D G3DSA:2.40.50.110 44 103 4.6E-18 T 28-03-2018 RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 SUPERFAMILY SSF54334 112 239 3.14E-46 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 PRINTS PR01898 Bacterial superantigen superfamily signature 220 236 2.3E-29 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 PRINTS PR01898 Bacterial superantigen superfamily signature 71 97 2.3E-29 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 PRINTS PR01898 Bacterial superantigen superfamily signature 142 155 2.3E-29 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 PRINTS PR01898 Bacterial superantigen superfamily signature 99 112 2.3E-29 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 PRINTS PR01898 Bacterial superantigen superfamily signature 155 169 2.3E-29 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 PRINTS PR00279 Bacterial toxin signature 101 113 9.9E-8 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 PRINTS PR00279 Bacterial toxin signature 142 158 9.9E-8 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 Pfam PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain 37 108 1.1E-5 T 28-03-2018 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold GO:0009405 RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 SUPERFAMILY SSF50203 9 115 2.38E-27 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 120 237 2.3E-36 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 142 165 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS01910 df5d34aec72ec594d5d5d0729a9be116 240 Gene3D G3DSA:3.10.20.120 104 237 8.8E-42 T 28-03-2018 RK98_RS02355 c781d77df887a83be8386eca5421530a 305 SMART SM00046 7 138 6.2E-5 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RK98_RS02355 c781d77df887a83be8386eca5421530a 305 Gene3D G3DSA:3.40.50.10330 2 140 2.3E-22 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 RK98_RS02355 c781d77df887a83be8386eca5421530a 305 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 135 2.0E-26 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 RK98_RS02355 c781d77df887a83be8386eca5421530a 305 SUPERFAMILY SSF111331 8 304 3.4E-59 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain RK98_RS02355 c781d77df887a83be8386eca5421530a 305 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 9 300 3.1E-50 T 28-03-2018 IPR005218 Diacylglycerol/lipid kinase RK98_RS00095 a09a35f9b77f1ffb41a636fe582b4361 164 Gene3D G3DSA:3.40.30.10 11 164 6.9E-23 T 28-03-2018 RK98_RS00095 a09a35f9b77f1ffb41a636fe582b4361 164 SUPERFAMILY SSF52833 1 159 1.28E-41 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS00095 a09a35f9b77f1ffb41a636fe582b4361 164 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 162 37.346 T 28-03-2018 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 RK98_RS00095 a09a35f9b77f1ffb41a636fe582b4361 164 Pfam PF08534 Redoxin 20 158 2.9E-25 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 RK98_RS00095 a09a35f9b77f1ffb41a636fe582b4361 164 ProSitePatterns PS01265 Tpx family signature. 82 93 - T 28-03-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 RK98_RS00705 789c40625f6d6e71c15cf68151e848ff 133 Pfam PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain 44 110 2.0E-11 T 28-03-2018 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold GO:0009405 RK98_RS00705 789c40625f6d6e71c15cf68151e848ff 133 Gene3D G3DSA:2.40.50.110 37 126 7.6E-26 T 28-03-2018 RK98_RS00705 789c40625f6d6e71c15cf68151e848ff 133 SUPERFAMILY SSF50203 21 127 3.1E-33 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS01980 5fa99cbe628b97c5c7b9d7218e5e6ed8 489 Pfam PF05272 Virulence-associated protein E 132 326 4.9E-71 T 28-03-2018 IPR007936 Virulence-associated E RK98_RS01980 5fa99cbe628b97c5c7b9d7218e5e6ed8 489 SUPERFAMILY SSF52540 101 297 1.49E-8 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS01980 5fa99cbe628b97c5c7b9d7218e5e6ed8 489 Gene3D G3DSA:3.40.50.300 104 321 3.9E-10 T 28-03-2018 RK98_RS02425 04cd11f99e3deab00524168491e1ed33 383 Pfam PF00425 chorismate binding enzyme 117 376 4.9E-80 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal RK98_RS02425 04cd11f99e3deab00524168491e1ed33 383 Gene3D G3DSA:3.60.120.10 27 381 6.3E-91 T 28-03-2018 IPR005801 ADC synthase GO:0009058 RK98_RS02425 04cd11f99e3deab00524168491e1ed33 383 PRINTS PR00095 Anthranilate synthase component I signature 316 330 2.2E-9 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RK98_RS02425 04cd11f99e3deab00524168491e1ed33 383 PRINTS PR00095 Anthranilate synthase component I signature 222 235 2.2E-9 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RK98_RS02425 04cd11f99e3deab00524168491e1ed33 383 PRINTS PR00095 Anthranilate synthase component I signature 236 249 2.2E-9 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RK98_RS02425 04cd11f99e3deab00524168491e1ed33 383 SUPERFAMILY SSF56322 10 380 4.97E-93 T 28-03-2018 IPR005801 ADC synthase GO:0009058 RK98_RS14950 c1edfb18b45a9eb65ab937aa33340ddf 202 Gene3D G3DSA:3.90.79.10 49 192 1.0E-8 T 28-03-2018 RK98_RS14950 c1edfb18b45a9eb65ab937aa33340ddf 202 Pfam PF00293 NUDIX domain 65 196 1.3E-7 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 RK98_RS14950 c1edfb18b45a9eb65ab937aa33340ddf 202 SUPERFAMILY SSF55811 65 188 7.18E-13 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 RK98_RS06520 e427788e361d63f81931532f3a9707dd 192 PIRSF PIRSF000495 1 188 1.1E-65 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RK98_RS06520 e427788e361d63f81931532f3a9707dd 192 Pfam PF00117 Glutamine amidotransferase class-I 4 179 1.6E-17 T 28-03-2018 IPR017926 Glutamine amidotransferase RK98_RS06520 e427788e361d63f81931532f3a9707dd 192 SUPERFAMILY SSF52317 2 185 7.81E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS06520 e427788e361d63f81931532f3a9707dd 192 Gene3D G3DSA:3.40.50.880 1 187 1.4E-31 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS06520 e427788e361d63f81931532f3a9707dd 192 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 187 32.39 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RK98_RS06520 e427788e361d63f81931532f3a9707dd 192 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 186 6.6E-72 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 RK98_RS15045 6186320629a10730c31ca10adde5b389 422 SUPERFAMILY SSF53659 5 421 3.26E-139 T 28-03-2018 RK98_RS15045 6186320629a10730c31ca10adde5b389 422 SMART SM01329 20 417 3.2E-183 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RK98_RS15045 6186320629a10730c31ca10adde5b389 422 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 21 416 5.3E-121 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 RK98_RS15045 6186320629a10730c31ca10adde5b389 422 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 306 325 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 RK98_RS15045 6186320629a10730c31ca10adde5b389 422 Gene3D G3DSA:3.40.718.10 9 422 4.4E-137 T 28-03-2018 RK98_RS15045 6186320629a10730c31ca10adde5b389 422 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 421 2.5E-211 T 28-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 RK98_RS10080 6ae7be23f91d02b72a29556ba7a0ae34 416 TIGRFAM TIGR00836 amt: ammonium transporter 5 402 7.8E-122 T 28-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 RK98_RS10080 6ae7be23f91d02b72a29556ba7a0ae34 416 Pfam PF00909 Ammonium Transporter Family 8 402 2.1E-112 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RK98_RS10080 6ae7be23f91d02b72a29556ba7a0ae34 416 SUPERFAMILY SSF111352 2 382 1.09E-116 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 RK98_RS10080 6ae7be23f91d02b72a29556ba7a0ae34 416 Gene3D G3DSA:1.10.3430.10 1 383 1.7E-122 T 28-03-2018 RK98_RS01850 82150bbacea9b5b37c75f2734a6b6575 80 Gene3D G3DSA:1.10.260.40 8 79 7.2E-8 T 28-03-2018 RK98_RS01850 82150bbacea9b5b37c75f2734a6b6575 80 Pfam PF05339 Protein of unknown function (DUF739) 4 70 3.7E-10 T 28-03-2018 IPR008003 Protein of unknown function DUF739 RK98_RS01850 82150bbacea9b5b37c75f2734a6b6575 80 SUPERFAMILY SSF47413 8 62 9.38E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS08655 86bed8174020a1d5f354588a42d88b0a 247 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 129 237 6.7E-32 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS08655 86bed8174020a1d5f354588a42d88b0a 247 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 7 117 2.7E-28 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS08655 86bed8174020a1d5f354588a42d88b0a 247 Gene3D G3DSA:1.10.10.10 140 238 2.1E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08655 86bed8174020a1d5f354588a42d88b0a 247 SUPERFAMILY SSF46785 9 124 2.5E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08655 86bed8174020a1d5f354588a42d88b0a 247 Gene3D G3DSA:1.10.10.10 2 125 0.0011 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08655 86bed8174020a1d5f354588a42d88b0a 247 SUPERFAMILY SSF46785 132 238 3.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03815 a7d459477dce08ca2f6420a0bdb96369 372 Pfam PF07907 YibE/F-like protein 130 361 8.1E-67 T 28-03-2018 IPR012507 YibE/F-like RK98_RS02580 5a0b13bdf6a0416cdf96958b40f11764 291 Pfam PF02673 Bacitracin resistance protein BacA 10 276 2.4E-78 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RK98_RS02580 5a0b13bdf6a0416cdf96958b40f11764 291 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 282 17.137 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RK98_RS02580 5a0b13bdf6a0416cdf96958b40f11764 291 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 274 9.6E-84 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 RK98_RS02170 c5f3c43e5186a02a9e4087e448a27771 78 Pfam PF09964 Uncharacterized protein conserved in bacteria (DUF2198) 3 74 4.1E-33 T 28-03-2018 IPR019242 Protein of unknown function DUF2198 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 ProSitePatterns PS00145 Urease active site. 321 337 - T 28-03-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 Hamap MF_01953 Urease subunit alpha [ureC]. 3 571 56.047 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 Gene3D G3DSA:3.20.20.140 147 425 2.7E-150 T 28-03-2018 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 Gene3D G3DSA:3.20.20.140 426 557 2.9E-42 T 28-03-2018 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 SUPERFAMILY SSF51338 413 483 2.64E-54 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 SUPERFAMILY SSF51338 4 111 2.64E-54 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 571 0.0 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 Pfam PF01979 Amidohydrolase family 129 458 1.2E-76 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 SUPERFAMILY SSF51556 485 571 3.54E-189 T 28-03-2018 IPR032466 Metal-dependent hydrolase RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 SUPERFAMILY SSF51556 133 436 3.54E-189 T 28-03-2018 IPR032466 Metal-dependent hydrolase RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 ProSitePatterns PS01120 Urease nickel ligands signature. 131 144 - T 28-03-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 123 1.2E-49 T 28-03-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 Gene3D G3DSA:2.30.40.10 69 146 1.2E-14 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 405 420 1.0E-32 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 338 354 1.0E-32 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 431 444 1.0E-32 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS08695 1c5b80a1beeeb55b8bdd607a7b14995a 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 299 316 1.0E-32 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 RK98_RS02290 bc26f12f9b828403f0a8df4e4e0cf7dc 253 SUPERFAMILY SSF52540 2 225 1.16E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02290 bc26f12f9b828403f0a8df4e4e0cf7dc 253 Pfam PF00005 ABC transporter 17 164 2.4E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02290 bc26f12f9b828403f0a8df4e4e0cf7dc 253 SMART SM00382 26 213 3.8E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02290 bc26f12f9b828403f0a8df4e4e0cf7dc 253 Gene3D G3DSA:3.40.50.300 1 244 6.2E-56 T 28-03-2018 RK98_RS11855 f41cb02b23fabc6bdc71a5cda395e1ca 204 PIRSF PIRSF021332 1 204 4.3E-89 T 28-03-2018 IPR009403 Protein of unknown function UPF0637 RK98_RS11855 f41cb02b23fabc6bdc71a5cda395e1ca 204 SUPERFAMILY SSF142913 3 203 2.38E-77 T 28-03-2018 RK98_RS11855 f41cb02b23fabc6bdc71a5cda395e1ca 204 Hamap MF_01851 UPF0637 protein . 5 204 39.078 T 28-03-2018 IPR009403 Protein of unknown function UPF0637 RK98_RS11855 f41cb02b23fabc6bdc71a5cda395e1ca 204 Pfam PF06335 Protein of unknown function (DUF1054) 6 202 2.5E-78 T 28-03-2018 IPR009403 Protein of unknown function UPF0637 RK98_RS12510 debeda82817578e844cf3fa78e87778d 213 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 19 207 4.1E-54 T 28-03-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 RK98_RS12510 debeda82817578e844cf3fa78e87778d 213 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 27 117 1.1E-17 T 28-03-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 RK98_RS12510 debeda82817578e844cf3fa78e87778d 213 SUPERFAMILY SSF63999 1 128 6.02E-31 T 28-03-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 RK98_RS12510 debeda82817578e844cf3fa78e87778d 213 Gene3D G3DSA:2.60.120.320 116 212 3.9E-22 T 28-03-2018 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 RK98_RS12510 debeda82817578e844cf3fa78e87778d 213 SMART SM00983 140 205 4.2E-22 T 28-03-2018 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 RK98_RS12510 debeda82817578e844cf3fa78e87778d 213 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 141 204 2.1E-14 T 28-03-2018 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 RK98_RS12510 debeda82817578e844cf3fa78e87778d 213 SUPERFAMILY SSF63862 131 209 8.89E-16 T 28-03-2018 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 RK98_RS12510 debeda82817578e844cf3fa78e87778d 213 Gene3D G3DSA:3.40.50.10240 2 115 1.8E-21 T 28-03-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 RK98_RS10830 a97ab58bf1a69af238f24c338c45ee0a 481 Pfam PF08460 Bacterial SH3 domain 395 460 3.6E-24 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type RK98_RS10830 a97ab58bf1a69af238f24c338c45ee0a 481 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 199 323 3.5E-15 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 RK98_RS10830 a97ab58bf1a69af238f24c338c45ee0a 481 SUPERFAMILY SSF55846 192 330 2.22E-31 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 RK98_RS10830 a97ab58bf1a69af238f24c338c45ee0a 481 Gene3D G3DSA:3.40.80.10 179 371 7.3E-22 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 RK98_RS10830 a97ab58bf1a69af238f24c338c45ee0a 481 SMART SM00644 188 338 1.7E-40 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 RK98_RS10830 a97ab58bf1a69af238f24c338c45ee0a 481 Gene3D G3DSA:2.30.30.410 372 481 3.8E-7 T 28-03-2018 RK98_RS10830 a97ab58bf1a69af238f24c338c45ee0a 481 SMART SM00287 398 466 2.7E-12 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type RK98_RS10830 a97ab58bf1a69af238f24c338c45ee0a 481 Pfam PF05257 CHAP domain 27 113 1.4E-11 T 28-03-2018 IPR007921 CHAP domain RK98_RS10830 a97ab58bf1a69af238f24c338c45ee0a 481 Gene3D G3DSA:3.90.1720.10 2 139 0.0034 T 28-03-2018 RK98_RS10830 a97ab58bf1a69af238f24c338c45ee0a 481 SUPERFAMILY SSF54001 19 151 2.55E-17 T 28-03-2018 RK98_RS02375 2e125bf797edd817599001e694a6cf77 352 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 1 350 55.563 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 RK98_RS02375 2e125bf797edd817599001e694a6cf77 352 Gene3D G3DSA:3.40.640.10 43 248 9.9E-40 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS02375 2e125bf797edd817599001e694a6cf77 352 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 218 227 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 RK98_RS02375 2e125bf797edd817599001e694a6cf77 352 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 3 348 9.2E-92 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 RK98_RS02375 2e125bf797edd817599001e694a6cf77 352 SUPERFAMILY SSF53383 1 346 1.1E-74 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS02375 2e125bf797edd817599001e694a6cf77 352 Pfam PF00155 Aminotransferase class I and II 30 344 4.9E-49 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RK98_RS02375 2e125bf797edd817599001e694a6cf77 352 Gene3D G3DSA:3.90.1150.10 249 350 3.2E-14 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS10950 5d656f0b9e9783550f419b3bc8735a7b 50 Pfam PF12459 D-Ala-teichoic acid biosynthesis protein 10 50 5.5E-16 T 28-03-2018 IPR021008 Protein of unknown function DUF3687 RK98_RS04535 cdfb762214efd93c71fea2985334103b 331 Pfam PF03601 Conserved hypothetical protein 698 12 310 2.0E-97 T 28-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 RK98_RS02915 4a8b77cf8c251cfea542758a05cf5400 74 Pfam PF11148 Protein of unknown function (DUF2922) 3 69 6.7E-18 T 28-03-2018 IPR021321 Protein of unknown function DUF2922 RK98_RS01620 80f151c3b1a731849813f2d0ac4448aa 50 Gene3D G3DSA:1.20.5.170 6 48 3.2E-4 T 28-03-2018 RK98_RS05120 39863fe919533977646cf64d488dfe46 525 SUPERFAMILY SSF100950 7 255 1.26E-64 T 28-03-2018 RK98_RS05120 39863fe919533977646cf64d488dfe46 525 Gene3D G3DSA:3.40.1080.10 278 524 1.4E-41 T 28-03-2018 RK98_RS05120 39863fe919533977646cf64d488dfe46 525 SUPERFAMILY SSF100950 279 519 4.19E-56 T 28-03-2018 RK98_RS05120 39863fe919533977646cf64d488dfe46 525 Pfam PF01144 Coenzyme A transferase 17 245 9.7E-20 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 RK98_RS05120 39863fe919533977646cf64d488dfe46 525 SMART SM00882 8 246 7.8E-33 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 RK98_RS05120 39863fe919533977646cf64d488dfe46 525 PIRSF PIRSF000858 3 525 7.3E-186 T 28-03-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 RK98_RS05120 39863fe919533977646cf64d488dfe46 525 Gene3D G3DSA:3.40.1080.10 7 271 2.8E-54 T 28-03-2018 RK98_RS06460 e5d9a8c25bda6737662b067650e641f5 171 Pfam PF04264 YceI-like domain 4 167 2.2E-34 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RK98_RS06460 e5d9a8c25bda6737662b067650e641f5 171 SUPERFAMILY SSF101874 3 167 1.03E-42 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RK98_RS06460 e5d9a8c25bda6737662b067650e641f5 171 Gene3D G3DSA:2.40.128.110 1 171 4.2E-40 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RK98_RS06460 e5d9a8c25bda6737662b067650e641f5 171 SMART SM00867 3 168 2.7E-52 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like RK98_RS12275 6d7901d2e30a3fe6540a426f35ea39da 537 PIRSF PIRSF012535 1 537 1.6E-234 T 28-03-2018 IPR011199 Bacillithiol biosynthesis BshC RK98_RS12275 6d7901d2e30a3fe6540a426f35ea39da 537 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 11 535 4.9E-189 T 28-03-2018 IPR011199 Bacillithiol biosynthesis BshC RK98_RS12275 6d7901d2e30a3fe6540a426f35ea39da 537 Pfam PF10079 Bacillithiol biosynthesis BshC 1 533 5.8E-157 T 28-03-2018 IPR011199 Bacillithiol biosynthesis BshC RK98_RS12275 6d7901d2e30a3fe6540a426f35ea39da 537 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 537 29.39 T 28-03-2018 IPR011199 Bacillithiol biosynthesis BshC RK98_RS06660 a21f5da1db04aba3abd75df785fbb63e 502 SUPERFAMILY SSF53756 174 499 6.28E-33 T 28-03-2018 RK98_RS06660 a21f5da1db04aba3abd75df785fbb63e 502 TIGRFAM TIGR02918 TIGR02918: accessory Sec system glycosylation protein GtfA 1 499 2.5E-263 T 28-03-2018 IPR014267 Glycosyltransferase Gtf1 GO:0016757 RK98_RS06660 a21f5da1db04aba3abd75df785fbb63e 502 Gene3D G3DSA:3.40.50.2000 309 473 1.1E-24 T 28-03-2018 RK98_RS06660 a21f5da1db04aba3abd75df785fbb63e 502 Pfam PF00534 Glycosyl transferases group 1 317 457 9.3E-24 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 RK98_RS06660 a21f5da1db04aba3abd75df785fbb63e 502 Hamap MF_01472 Glycosyltransferase Gtf1 [gtf1]. 2 501 48.919 T 28-03-2018 IPR014267 Glycosyltransferase Gtf1 GO:0016757 RK98_RS04715 58047cc00010813ceb6e61f2846ba705 349 Pfam PF02687 FtsX-like permease family 261 344 1.0E-5 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RK98_RS01775 7aaa98e8fc15ffa65944fb79957e1031 156 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 35.575 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RK98_RS01775 7aaa98e8fc15ffa65944fb79957e1031 156 Pfam PF00436 Single-strand binding protein family 2 103 3.5E-37 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 RK98_RS01775 7aaa98e8fc15ffa65944fb79957e1031 156 PIRSF PIRSF002070 1 153 7.1E-44 T 28-03-2018 RK98_RS01775 7aaa98e8fc15ffa65944fb79957e1031 156 SUPERFAMILY SSF50249 1 156 6.51E-53 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS01775 7aaa98e8fc15ffa65944fb79957e1031 156 Gene3D G3DSA:2.40.50.140 1 124 5.1E-41 T 28-03-2018 RK98_RS01775 7aaa98e8fc15ffa65944fb79957e1031 156 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 156 1.6E-45 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 RK98_RS11785 476e2c6b67760f4d019e478c1a7d3615 208 Gene3D G3DSA:1.20.120.570 10 208 6.3E-43 T 28-03-2018 RK98_RS11785 476e2c6b67760f4d019e478c1a7d3615 208 Pfam PF10368 Putative cell-wall binding lipoprotein 12 206 2.2E-50 T 28-03-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like RK98_RS11785 476e2c6b67760f4d019e478c1a7d3615 208 SUPERFAMILY SSF140423 21 204 5.75E-45 T 28-03-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like RK98_RS13295 5eebc15d560f37f1e09a66d64ddc883e 420 Gene3D G3DSA:1.10.150.20 185 262 1.7E-18 T 28-03-2018 RK98_RS13295 5eebc15d560f37f1e09a66d64ddc883e 420 SUPERFAMILY SSF56672 10 250 6.76E-54 T 28-03-2018 RK98_RS13295 5eebc15d560f37f1e09a66d64ddc883e 420 Gene3D G3DSA:3.30.1490.100 263 370 6.8E-24 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RK98_RS13295 5eebc15d560f37f1e09a66d64ddc883e 420 Pfam PF00817 impB/mucB/samB family 15 165 6.1E-33 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RK98_RS13295 5eebc15d560f37f1e09a66d64ddc883e 420 SUPERFAMILY SSF100879 269 355 4.12E-10 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RK98_RS13295 5eebc15d560f37f1e09a66d64ddc883e 420 Gene3D G3DSA:3.30.70.270 51 127 1.4E-11 T 28-03-2018 RK98_RS13295 5eebc15d560f37f1e09a66d64ddc883e 420 Gene3D G3DSA:3.30.70.270 128 184 3.0E-10 T 28-03-2018 RK98_RS13295 5eebc15d560f37f1e09a66d64ddc883e 420 Pfam PF11798 IMS family HHH motif 181 213 5.1E-9 T 28-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 RK98_RS13295 5eebc15d560f37f1e09a66d64ddc883e 420 Pfam PF11799 impB/mucB/samB family C-terminal domain 258 364 1.1E-14 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 RK98_RS04700 d82aea986a5473d83b37d78fd9f52f89 316 Pfam PF13303 Phosphotransferase system, EIIC 1 309 1.2E-64 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS08320 dc4c0641b45127fbb6c797456f5f4342 322 Gene3D G3DSA:3.40.50.620 138 280 6.1E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS08320 dc4c0641b45127fbb6c797456f5f4342 322 Pfam PF02698 DUF218 domain 148 278 2.0E-32 T 28-03-2018 IPR003848 Domain of unknown function DUF218 RK98_RS06590 69319b2234b69ea95365ff4d285bc41e 255 Gene3D G3DSA:3.20.20.140 1 231 1.3E-24 T 28-03-2018 RK98_RS06590 69319b2234b69ea95365ff4d285bc41e 255 SUPERFAMILY SSF89550 1 208 3.92E-18 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 RK98_RS06590 69319b2234b69ea95365ff4d285bc41e 255 PIRSF PIRSF016557 1 255 1.8E-106 T 28-03-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 RK98_RS14960 c0633a21b7f0ecb3702107ee596ab4a9 118 Gene3D G3DSA:1.10.1900.20 55 116 3.8E-31 T 28-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14960 c0633a21b7f0ecb3702107ee596ab4a9 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14960 c0633a21b7f0ecb3702107ee596ab4a9 118 SUPERFAMILY SSF74731 2 117 4.19E-50 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14960 c0633a21b7f0ecb3702107ee596ab4a9 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.8E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14960 c0633a21b7f0ecb3702107ee596ab4a9 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.8E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14960 c0633a21b7f0ecb3702107ee596ab4a9 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.8E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14960 c0633a21b7f0ecb3702107ee596ab4a9 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 7.0E-16 T 28-03-2018 RK98_RS14960 c0633a21b7f0ecb3702107ee596ab4a9 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.645 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14960 c0633a21b7f0ecb3702107ee596ab4a9 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 6.9E-52 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14960 c0633a21b7f0ecb3702107ee596ab4a9 118 Pfam PF00453 Ribosomal protein L20 3 109 2.3E-49 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS00510 194c95db93a30da19c699289ee5192d7 248 Pfam PF00326 Prolyl oligopeptidase family 148 243 8.3E-11 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 RK98_RS00510 194c95db93a30da19c699289ee5192d7 248 SUPERFAMILY SSF53474 8 244 1.74E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS00510 194c95db93a30da19c699289ee5192d7 248 Gene3D G3DSA:3.40.50.1820 4 246 4.7E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS11930 8df4b30d9f9d6960ae8650124387a600 308 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 51 296 1.7E-26 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RK98_RS11930 8df4b30d9f9d6960ae8650124387a600 308 SUPERFAMILY SSF51695 44 301 3.92E-58 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS11930 8df4b30d9f9d6960ae8650124387a600 308 Gene3D G3DSA:3.20.20.190 22 308 7.3E-51 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS10925 ec7c00b10e56adbf8e2ba4f8c0958914 88 Pfam PF11256 Protein of unknown function (DUF3055) 6 85 7.8E-35 T 28-03-2018 IPR021415 Protein of unknown function DUF3055 RK98_RS08820 b448b0bbe2e6ab206efd1e65ff053ad3 116 SUPERFAMILY SSF46785 5 110 4.33E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08820 b448b0bbe2e6ab206efd1e65ff053ad3 116 Pfam PF01047 MarR family 28 90 1.1E-5 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS08820 b448b0bbe2e6ab206efd1e65ff053ad3 116 Gene3D G3DSA:1.10.10.10 1 113 8.6E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08820 b448b0bbe2e6ab206efd1e65ff053ad3 116 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 6 110 4.0E-25 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS08350 8ed02362d8e65267bdfd721a11063a5c 184 Gene3D G3DSA:1.10.10.60 1 147 5.1E-11 T 28-03-2018 RK98_RS08350 8ed02362d8e65267bdfd721a11063a5c 184 SUPERFAMILY SSF46689 5 60 9.22E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS08350 8ed02362d8e65267bdfd721a11063a5c 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 53 8.5E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS00080 695724cafa9362ab0a7900f7230eb521 166 PRINTS PR01438 Universal stress protein signature 103 115 7.5E-19 T 28-03-2018 IPR006015 Universal stress protein A RK98_RS00080 695724cafa9362ab0a7900f7230eb521 166 PRINTS PR01438 Universal stress protein signature 121 143 7.5E-19 T 28-03-2018 IPR006015 Universal stress protein A RK98_RS00080 695724cafa9362ab0a7900f7230eb521 166 PRINTS PR01438 Universal stress protein signature 4 22 7.5E-19 T 28-03-2018 IPR006015 Universal stress protein A RK98_RS00080 695724cafa9362ab0a7900f7230eb521 166 Pfam PF00582 Universal stress protein family 4 143 1.1E-35 T 28-03-2018 IPR006016 UspA GO:0006950 RK98_RS00080 695724cafa9362ab0a7900f7230eb521 166 Gene3D G3DSA:3.40.50.620 2 154 3.6E-38 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS00080 695724cafa9362ab0a7900f7230eb521 166 PIRSF PIRSF006276 1 146 1.5E-21 T 28-03-2018 IPR006015 Universal stress protein A RK98_RS00080 695724cafa9362ab0a7900f7230eb521 166 SUPERFAMILY SSF52402 4 147 3.68E-37 T 28-03-2018 RK98_RS04790 8bc309b041d6160c0241dde01d4f6e26 227 Pfam PF16882 Domain of unknown function (DUF5079) 4 226 5.4E-94 T 28-03-2018 IPR031690 Protein of unknown function DUF5079 RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 Pfam PF05031 Iron Transport-associated domain 349 448 1.1E-16 T 28-03-2018 IPR006635 NEAT domain RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 Pfam PF05031 Iron Transport-associated domain 147 253 2.6E-11 T 28-03-2018 IPR006635 NEAT domain RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 SUPERFAMILY SSF158911 127 265 5.49E-36 T 28-03-2018 RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 TIGRFAM TIGR03657 IsdB: heme uptake protein IsdB 1 645 0.0 T 28-03-2018 IPR019929 Iron-regulated surface determinant protein IsdB GO:0005618|GO:0015232|GO:0015886 RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 SMART SM00725 144 269 3.5E-39 T 28-03-2018 IPR006635 NEAT domain RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 SMART SM00725 341 458 1.1E-40 T 28-03-2018 IPR006635 NEAT domain RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 Pfam PF04650 YSIRK type signal peptide 7 32 2.0E-8 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 Pfam PF00746 LPXTG cell wall anchor motif 603 645 4.0E-8 T 28-03-2018 IPR019948 Gram-positive LPXTG cell wall anchor RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 SUPERFAMILY SSF158911 322 463 3.92E-32 T 28-03-2018 RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 609 645 7.0E-4 T 28-03-2018 RK98_RS11975 f1255fb82effa53e6df927401c3c97b3 645 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 1 42 2.7E-10 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS14535 56493fd6a298acba5045c7684aa04a8a 79 SUPERFAMILY SSF54334 1 78 6.81E-25 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS14535 56493fd6a298acba5045c7684aa04a8a 79 PRINTS PR01898 Bacterial superantigen superfamily signature 9 23 9.2E-7 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS14535 56493fd6a298acba5045c7684aa04a8a 79 PRINTS PR01898 Bacterial superantigen superfamily signature 59 75 9.2E-7 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS14535 56493fd6a298acba5045c7684aa04a8a 79 Gene3D G3DSA:3.10.20.120 1 76 3.9E-21 T 28-03-2018 RK98_RS14535 56493fd6a298acba5045c7684aa04a8a 79 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 1 76 1.1E-27 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS07090 a6e41933f28ab20330b41c75dc8959cd 125 SUPERFAMILY SSF54593 1 123 2.42E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS07090 a6e41933f28ab20330b41c75dc8959cd 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 122 1.4E-7 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK98_RS07090 a6e41933f28ab20330b41c75dc8959cd 125 Gene3D G3DSA:3.10.180.10 5 124 1.9E-18 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS01810 df0146e73ce75faf78c6e7b8693d311d 53 Pfam PF06900 Protein of unknown function (DUF1270) 1 51 5.1E-34 T 28-03-2018 IPR009682 Protein of unknown function DUF1270 RK98_RS04850 c2ad32940f6408b1dc5b62d881de7115 97 Pfam PF06013 Proteins of 100 residues with WXG 4 88 4.6E-22 T 28-03-2018 IPR010310 Type VII secretion system ESAT-6-like RK98_RS04850 c2ad32940f6408b1dc5b62d881de7115 97 Gene3D G3DSA:1.10.287.1060 1 96 5.1E-20 T 28-03-2018 RK98_RS04850 c2ad32940f6408b1dc5b62d881de7115 97 SUPERFAMILY SSF140453 3 95 4.32E-21 T 28-03-2018 IPR010310 Type VII secretion system ESAT-6-like RK98_RS04850 c2ad32940f6408b1dc5b62d881de7115 97 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 3 90 2.5E-23 T 28-03-2018 IPR010310 Type VII secretion system ESAT-6-like RK98_RS13710 3411d262cb66b9bc9983f04f9ed32597 110 Pfam PF16230 Domain of unknown function (DUF4889) 37 107 1.3E-35 T 28-03-2018 IPR032613 Protein of unknown function DUF4889 RK98_RS07155 cf2d4268369984dd11f6fab9c16af3f7 287 Gene3D G3DSA:1.10.600.10 2 287 1.9E-65 T 28-03-2018 IPR008949 Isoprenoid synthase domain RK98_RS07155 cf2d4268369984dd11f6fab9c16af3f7 287 SUPERFAMILY SSF48576 8 283 2.3E-61 T 28-03-2018 IPR008949 Isoprenoid synthase domain RK98_RS07155 cf2d4268369984dd11f6fab9c16af3f7 287 Pfam PF00494 Squalene/phytoene synthase 16 271 8.7E-58 T 28-03-2018 IPR002060 Squalene/phytoene synthase GO:0009058|GO:0016740 RK98_RS07155 cf2d4268369984dd11f6fab9c16af3f7 287 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 129 144 - T 28-03-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 RK98_RS01675 9b7e8565072ff8e07b33ff678fd210cb 94 Gene3D G3DSA:1.10.720.10 50 89 2.6E-4 T 28-03-2018 RK98_RS04310 041f585a2e46abf003fcc86406ba9607 462 SUPERFAMILY SSF118215 31 441 5.75E-86 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS04310 041f585a2e46abf003fcc86406ba9607 462 Gene3D G3DSA:1.10.3860.10 19 449 1.6E-83 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS04310 041f585a2e46abf003fcc86406ba9607 462 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 3.0E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS04310 041f585a2e46abf003fcc86406ba9607 462 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 3.0E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS04310 041f585a2e46abf003fcc86406ba9607 462 PRINTS PR00173 Glutamate-aspartate symporter signature 28 48 3.0E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS04310 041f585a2e46abf003fcc86406ba9607 462 PRINTS PR00173 Glutamate-aspartate symporter signature 76 96 3.0E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS04310 041f585a2e46abf003fcc86406ba9607 462 PRINTS PR00173 Glutamate-aspartate symporter signature 106 131 3.0E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS04310 041f585a2e46abf003fcc86406ba9607 462 PRINTS PR00173 Glutamate-aspartate symporter signature 233 252 3.0E-20 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS04310 041f585a2e46abf003fcc86406ba9607 462 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 2.0E-96 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 RK98_RS11655 6570531af657c8c594fe3ac9684c00b2 223 SUPERFAMILY SSF52317 1 217 1.43E-73 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS11655 6570531af657c8c594fe3ac9684c00b2 223 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 216 41.315 T 28-03-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS11655 6570531af657c8c594fe3ac9684c00b2 223 Gene3D G3DSA:3.40.50.880 1 220 2.9E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like RK98_RS11655 6570531af657c8c594fe3ac9684c00b2 223 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 217 3.7E-98 T 28-03-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS11655 6570531af657c8c594fe3ac9684c00b2 223 PIRSF PIRSF001586 1 221 1.9E-79 T 28-03-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 RK98_RS11655 6570531af657c8c594fe3ac9684c00b2 223 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 201 3.4E-45 T 28-03-2018 RK98_RS11655 6570531af657c8c594fe3ac9684c00b2 223 SMART SM01211 1 218 1.8E-118 T 28-03-2018 RK98_RS05875 b97e84a194d2a47f14f7556c68db6825 397 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 305 1.0E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS05875 b97e84a194d2a47f14f7556c68db6825 397 SUPERFAMILY SSF51905 202 326 2.55E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS05875 b97e84a194d2a47f14f7556c68db6825 397 SUPERFAMILY SSF51905 1 105 2.55E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS05875 b97e84a194d2a47f14f7556c68db6825 397 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 4.5E-8 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS05875 b97e84a194d2a47f14f7556c68db6825 397 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 217 233 4.5E-8 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS05875 b97e84a194d2a47f14f7556c68db6825 397 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 288 306 4.5E-8 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 RK98_RS05875 b97e84a194d2a47f14f7556c68db6825 397 SUPERFAMILY SSF51905 119 259 8.49E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS05875 b97e84a194d2a47f14f7556c68db6825 397 Gene3D G3DSA:3.50.50.60 136 259 1.9E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS05875 b97e84a194d2a47f14f7556c68db6825 397 Gene3D G3DSA:3.50.50.60 4 94 1.6E-10 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS05875 b97e84a194d2a47f14f7556c68db6825 397 Gene3D G3DSA:3.50.50.60 95 135 0.3 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS12470 20dcc63c92454b18e1b75a2d9edfc6c3 162 SUPERFAMILY SSF56420 1 155 1.15E-41 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS12470 20dcc63c92454b18e1b75a2d9edfc6c3 162 Hamap MF_00163 Peptide deformylase [def]. 2 158 20.675 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS12470 20dcc63c92454b18e1b75a2d9edfc6c3 162 Pfam PF01327 Polypeptide deformylase 4 148 1.7E-38 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS12470 20dcc63c92454b18e1b75a2d9edfc6c3 162 PIRSF PIRSF004749 1 162 6.9E-44 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS12470 20dcc63c92454b18e1b75a2d9edfc6c3 162 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 154 5.7E-31 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS12470 20dcc63c92454b18e1b75a2d9edfc6c3 162 PRINTS PR01576 Peptide deformylase signature 119 148 1.0E-18 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS12470 20dcc63c92454b18e1b75a2d9edfc6c3 162 PRINTS PR01576 Peptide deformylase signature 100 118 1.0E-18 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS12470 20dcc63c92454b18e1b75a2d9edfc6c3 162 PRINTS PR01576 Peptide deformylase signature 88 99 1.0E-18 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS12470 20dcc63c92454b18e1b75a2d9edfc6c3 162 PRINTS PR01576 Peptide deformylase signature 33 62 1.0E-18 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS12470 20dcc63c92454b18e1b75a2d9edfc6c3 162 Gene3D G3DSA:3.90.45.10 2 158 9.7E-40 T 28-03-2018 IPR023635 Peptide deformylase RK98_RS02385 aad24660cfc1d37e09f06acf440fe101 325 SUPERFAMILY SSF52540 1 237 4.26E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02385 aad24660cfc1d37e09f06acf440fe101 325 SMART SM00382 26 218 1.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS02385 aad24660cfc1d37e09f06acf440fe101 325 Gene3D G3DSA:3.40.50.300 1 271 1.5E-76 T 28-03-2018 RK98_RS02385 aad24660cfc1d37e09f06acf440fe101 325 Pfam PF00005 ABC transporter 17 163 1.3E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS02385 aad24660cfc1d37e09f06acf440fe101 325 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS14265 ecf7e77fb74caba9b691b7eed54f629e 109 SUPERFAMILY SSF89957 1 103 1.15E-30 T 28-03-2018 IPR029756 MTH1187/YkoF-like RK98_RS14265 ecf7e77fb74caba9b691b7eed54f629e 109 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 101 1.3E-33 T 28-03-2018 IPR002767 Thiamine-binding protein RK98_RS14265 ecf7e77fb74caba9b691b7eed54f629e 109 Pfam PF01910 Thiamine-binding protein 4 99 1.1E-31 T 28-03-2018 IPR002767 Thiamine-binding protein RK98_RS14265 ecf7e77fb74caba9b691b7eed54f629e 109 Gene3D G3DSA:3.30.70.930 1 107 1.1E-32 T 28-03-2018 IPR029756 MTH1187/YkoF-like RK98_RS11215 d68494d7792cd5210d6ebce672470fc2 123 Pfam PF13038 Domain of unknown function (DUF3899) 32 120 3.9E-24 T 28-03-2018 IPR025007 Domain of unknown function DUF3899 RK98_RS05830 54006cd999f938bd41d01d81bb5eb8c1 328 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 51 192 1.0E-17 T 28-03-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain RK98_RS05830 54006cd999f938bd41d01d81bb5eb8c1 328 SUPERFAMILY SSF51695 29 314 7.59E-50 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS05830 54006cd999f938bd41d01d81bb5eb8c1 328 Gene3D G3DSA:3.20.20.190 27 328 8.6E-64 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS05830 54006cd999f938bd41d01d81bb5eb8c1 328 SMART SM00148 41 192 2.0E-65 T 28-03-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain RK98_RS04690 b81f246788cc6a384be804a21e1cc8e6 307 Pfam PF04227 Indigoidine synthase A like protein 13 302 1.1E-131 T 28-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 RK98_RS04690 b81f246788cc6a384be804a21e1cc8e6 307 Gene3D G3DSA:3.40.1790.10 3 307 4.7E-139 T 28-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 RK98_RS04690 b81f246788cc6a384be804a21e1cc8e6 307 SUPERFAMILY SSF110581 6 303 9.55E-119 T 28-03-2018 RK98_RS04690 b81f246788cc6a384be804a21e1cc8e6 307 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 12 305 43.441 T 28-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 RK98_RS08480 46c25281919dc43a1a7db53da7964f8e 412 Gene3D G3DSA:2.30.40.10 10 85 5.3E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS08480 46c25281919dc43a1a7db53da7964f8e 412 Hamap MF_00372 Imidazolonepropionase [hutI]. 3 403 40.308 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS08480 46c25281919dc43a1a7db53da7964f8e 412 Pfam PF01979 Amidohydrolase family 67 402 8.4E-19 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 RK98_RS08480 46c25281919dc43a1a7db53da7964f8e 412 Gene3D G3DSA:3.20.20.140 86 362 2.3E-45 T 28-03-2018 RK98_RS08480 46c25281919dc43a1a7db53da7964f8e 412 SUPERFAMILY SSF51556 70 361 3.96E-68 T 28-03-2018 IPR032466 Metal-dependent hydrolase RK98_RS08480 46c25281919dc43a1a7db53da7964f8e 412 TIGRFAM TIGR01224 hutI: imidazolonepropionase 34 402 4.5E-131 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 RK98_RS08480 46c25281919dc43a1a7db53da7964f8e 412 SUPERFAMILY SSF51338 31 71 6.95E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS08480 46c25281919dc43a1a7db53da7964f8e 412 SUPERFAMILY SSF51338 363 405 6.95E-20 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 RK98_RS03250 437ae1fb7b3965c22084692e40751414 220 PIRSF PIRSF000705 1 218 3.3E-63 T 28-03-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 RK98_RS03250 437ae1fb7b3965c22084692e40751414 220 Pfam PF01712 Deoxynucleoside kinase 12 211 1.6E-62 T 28-03-2018 IPR031314 Deoxynucleoside kinase domain RK98_RS03250 437ae1fb7b3965c22084692e40751414 220 SUPERFAMILY SSF52540 9 208 2.81E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03250 437ae1fb7b3965c22084692e40751414 220 Gene3D G3DSA:3.40.50.300 7 214 3.5E-43 T 28-03-2018 RK98_RS06975 fec87b3dc0e64f2815ddecebfad14f79 358 SUPERFAMILY SSF50494 65 286 2.54E-33 T 28-03-2018 IPR009003 Peptidase S1, PA clan RK98_RS06975 fec87b3dc0e64f2815ddecebfad14f79 358 Gene3D G3DSA:2.40.10.10 203 288 1.4E-17 T 28-03-2018 RK98_RS06975 fec87b3dc0e64f2815ddecebfad14f79 358 PRINTS PR00839 V8 serine protease family signature 245 257 1.1E-6 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS06975 fec87b3dc0e64f2815ddecebfad14f79 358 PRINTS PR00839 V8 serine protease family signature 76 93 1.1E-6 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS06975 fec87b3dc0e64f2815ddecebfad14f79 358 PRINTS PR00839 V8 serine protease family signature 105 122 1.1E-6 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS06975 fec87b3dc0e64f2815ddecebfad14f79 358 Gene3D G3DSA:2.40.10.10 84 191 2.2E-12 T 28-03-2018 RK98_RS06975 fec87b3dc0e64f2815ddecebfad14f79 358 Pfam PF00089 Trypsin 95 265 1.4E-11 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 RK98_RS05640 81a4f5bc33d152d07a4894b5ad2335aa 476 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 325 460 4.3E-15 T 28-03-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain RK98_RS05640 81a4f5bc33d152d07a4894b5ad2335aa 476 Pfam PF01943 Polysaccharide biosynthesis protein 7 272 4.2E-18 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RK98_RS05550 b60f976382e25fd8612d1afbbcacd36a 222 TIGRFAM TIGR01006 polys_exp_MPA1: polysaccharide export protein, MPA1 family 1 222 3.8E-97 T 28-03-2018 IPR005701 Polysaccharide export protein MPA1-like GO:0015542|GO:0015774|GO:0016021 RK98_RS05550 b60f976382e25fd8612d1afbbcacd36a 222 Gene3D G3DSA:3.30.1890.10 37 150 1.0E-5 T 28-03-2018 RK98_RS05550 b60f976382e25fd8612d1afbbcacd36a 222 Pfam PF02706 Chain length determinant protein 4 94 1.6E-23 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 RK98_RS01085 46edced7225db493a967f552ef6e18b8 148 Pfam PF01475 Ferric uptake regulator family 22 139 2.3E-40 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RK98_RS01085 46edced7225db493a967f552ef6e18b8 148 SUPERFAMILY SSF46785 14 143 8.17E-43 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS01085 46edced7225db493a967f552ef6e18b8 148 Gene3D G3DSA:1.10.10.10 2 94 1.1E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS00120 47b0929a631375fe4431e9a96147211c 564 Gene3D G3DSA:1.20.120.330 26 237 0.024 T 28-03-2018 RK98_RS00120 47b0929a631375fe4431e9a96147211c 564 Pfam PF06160 Septation ring formation regulator, EzrA 5 560 2.8E-158 T 28-03-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 RK98_RS00120 47b0929a631375fe4431e9a96147211c 564 Gene3D G3DSA:1.25.40.10 511 560 0.049 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 RK98_RS00120 47b0929a631375fe4431e9a96147211c 564 Gene3D G3DSA:1.20.1480.30 250 433 0.52 T 28-03-2018 RK98_RS00120 47b0929a631375fe4431e9a96147211c 564 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 3 564 20.715 T 28-03-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 RK98_RS03335 a68e196d5d31cefd80efd85617681cf5 166 Pfam PF00466 Ribosomal protein L10 6 101 9.5E-30 T 28-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 RK98_RS03335 a68e196d5d31cefd80efd85617681cf5 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 28-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS03335 a68e196d5d31cefd80efd85617681cf5 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.38 T 28-03-2018 IPR022973 Ribosomal protein L10 RK98_RS03335 a68e196d5d31cefd80efd85617681cf5 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 6 143 6.0E-5 T 28-03-2018 RK98_RS03335 a68e196d5d31cefd80efd85617681cf5 166 SUPERFAMILY SSF160369 5 160 5.1E-54 T 28-03-2018 RK98_RS07400 e6f2cca5deb2af54eac67dd2aa57c43f 654 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 12 649 3.0E-283 T 28-03-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 RK98_RS07400 e6f2cca5deb2af54eac67dd2aa57c43f 654 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 10 654 39.338 T 28-03-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 RK98_RS07400 e6f2cca5deb2af54eac67dd2aa57c43f 654 PIRSF PIRSF000906 6 654 0.0 T 28-03-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 RK98_RS07400 e6f2cca5deb2af54eac67dd2aa57c43f 654 SUPERFAMILY SSF56300 524 569 5.25E-7 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS07400 e6f2cca5deb2af54eac67dd2aa57c43f 654 SUPERFAMILY SSF56300 199 244 5.25E-7 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS07400 e6f2cca5deb2af54eac67dd2aa57c43f 654 SUPERFAMILY SSF56300 363 492 5.25E-7 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS07400 e6f2cca5deb2af54eac67dd2aa57c43f 654 Gene3D G3DSA:3.60.21.10 25 599 3.9E-47 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS07400 e6f2cca5deb2af54eac67dd2aa57c43f 654 SUPERFAMILY SSF56300 198 254 1.85E-9 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS07400 e6f2cca5deb2af54eac67dd2aa57c43f 654 SUPERFAMILY SSF56300 42 67 1.85E-9 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS05700 40bc687d5b876c5eee0ec72f69ef2dce 616 Pfam PF04183 IucA / IucC family 156 403 2.2E-63 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 RK98_RS05700 40bc687d5b876c5eee0ec72f69ef2dce 616 Pfam PF06276 Ferric iron reductase FhuF-like transporter 422 593 2.3E-36 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain RK98_RS07000 2068d616e5619b2df1bf40b2ed407d7f 149 Gene3D G3DSA:3.10.180.10 1 149 2.0E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS07000 2068d616e5619b2df1bf40b2ed407d7f 149 SUPERFAMILY SSF54593 1 141 3.16E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS07000 2068d616e5619b2df1bf40b2ed407d7f 149 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 7 138 1.8E-9 T 28-03-2018 IPR028973 PhnB-like RK98_RS10325 eb90043b3e4f5fd5921fe4006ddacd57 228 SMART SM00318 87 221 3.3E-51 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RK98_RS10325 eb90043b3e4f5fd5921fe4006ddacd57 228 SUPERFAMILY SSF50199 87 224 7.85E-36 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RK98_RS10325 eb90043b3e4f5fd5921fe4006ddacd57 228 ProSitePatterns PS01123 Thermonuclease family signature 1. 98 122 - T 28-03-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 RK98_RS10325 eb90043b3e4f5fd5921fe4006ddacd57 228 Pfam PF00565 Staphylococcal nuclease homologue 112 221 1.8E-35 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RK98_RS10325 eb90043b3e4f5fd5921fe4006ddacd57 228 Gene3D G3DSA:2.40.50.90 80 228 1.3E-37 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain RK98_RS10325 eb90043b3e4f5fd5921fe4006ddacd57 228 ProSitePatterns PS01284 Thermonuclease family signature 2. 162 172 - T 28-03-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 RK98_RS06670 5fa9665a27c61aab658a83363a9b2f39 635 Gene3D G3DSA:1.20.5.420 51 109 2.9E-7 T 28-03-2018 RK98_RS02830 ab9b7bc58974b4ab8822e988ad31ae6f 250 Pfam PF13398 Peptidase M50B-like 23 240 7.3E-45 T 28-03-2018 RK98_RS07390 840e4984c9dbafa39a166e19788a7b14 197 Gene3D G3DSA:3.40.50.1820 3 190 2.5E-26 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS07390 840e4984c9dbafa39a166e19788a7b14 197 Pfam PF02230 Phospholipase/Carboxylesterase 3 190 1.2E-9 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 RK98_RS07390 840e4984c9dbafa39a166e19788a7b14 197 SUPERFAMILY SSF53474 3 190 7.32E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS01330 1b32685e80ef57540273635f4a818a60 399 Pfam PF07537 CamS sex pheromone cAM373 precursor 60 391 5.5E-114 T 28-03-2018 IPR011426 CamS sex pheromone cAM373 RK98_RS01330 1b32685e80ef57540273635f4a818a60 399 PIRSF PIRSF012509 1 398 8.1E-146 T 28-03-2018 IPR011426 CamS sex pheromone cAM373 RK98_RS01330 1b32685e80ef57540273635f4a818a60 399 Gene3D G3DSA:3.10.570.10 58 398 2.6E-118 T 28-03-2018 RK98_RS01415 c05852cc09da55d87eaca7e0741bc2c6 365 Gene3D G3DSA:2.160.20.10 1 361 4.8E-42 T 28-03-2018 IPR012334 Pectin lyase fold RK98_RS01415 c05852cc09da55d87eaca7e0741bc2c6 365 Pfam PF12708 Pectate lyase superfamily protein 2 200 4.4E-12 T 28-03-2018 IPR024535 Pectate lyase superfamily protein RK98_RS01415 c05852cc09da55d87eaca7e0741bc2c6 365 SUPERFAMILY SSF51126 2 337 8.98E-35 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor RK98_RS01415 c05852cc09da55d87eaca7e0741bc2c6 365 SMART SM00710 118 149 2000.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat RK98_RS01415 c05852cc09da55d87eaca7e0741bc2c6 365 SMART SM00710 225 247 4600.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat RK98_RS01415 c05852cc09da55d87eaca7e0741bc2c6 365 SMART SM00710 290 313 1200.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat RK98_RS01415 c05852cc09da55d87eaca7e0741bc2c6 365 SMART SM00710 319 340 280.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat RK98_RS01415 c05852cc09da55d87eaca7e0741bc2c6 365 SMART SM00710 248 269 1600.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat RK98_RS02640 9ca45562bfd1f438d948947555eedba8 214 SUPERFAMILY SSF159234 1 159 4.84E-28 T 28-03-2018 IPR007295 Domain of unknown function DUF402 RK98_RS02640 9ca45562bfd1f438d948947555eedba8 214 Pfam PF04167 Protein of unknown function (DUF402) 61 128 5.2E-17 T 28-03-2018 IPR007295 Domain of unknown function DUF402 RK98_RS02640 9ca45562bfd1f438d948947555eedba8 214 Gene3D G3DSA:2.40.380.10 1 168 6.3E-21 T 28-03-2018 IPR007295 Domain of unknown function DUF402 RK98_RS12890 ca2d1bb8054d22ef7fdd88617ef58d2a 163 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 4 159 4.4E-62 T 28-03-2018 IPR012652 Energy coupling factor transporter S component ThiW RK98_RS12890 ca2d1bb8054d22ef7fdd88617ef58d2a 163 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 6 154 1.3E-53 T 28-03-2018 IPR012652 Energy coupling factor transporter S component ThiW RK98_RS12890 ca2d1bb8054d22ef7fdd88617ef58d2a 163 PIRSF PIRSF024534 1 163 3.3E-65 T 28-03-2018 IPR012652 Energy coupling factor transporter S component ThiW RK98_RS08000 5bad2700c2674ceb0fd87e49247a59a4 228 PIRSF PIRSF000709 133 219 3.4 T 28-03-2018 RK98_RS08000 5bad2700c2674ceb0fd87e49247a59a4 228 PIRSF PIRSF000709 2 117 3.5E-7 T 28-03-2018 RK98_RS08000 5bad2700c2674ceb0fd87e49247a59a4 228 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 128 1.3E-27 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RK98_RS08000 5bad2700c2674ceb0fd87e49247a59a4 228 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 3 228 2.7E-100 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 RK98_RS08000 5bad2700c2674ceb0fd87e49247a59a4 228 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 RK98_RS08000 5bad2700c2674ceb0fd87e49247a59a4 228 Gene3D G3DSA:3.40.50.1240 1 228 6.4E-60 T 28-03-2018 IPR029033 Histidine phosphatase superfamily RK98_RS08000 5bad2700c2674ceb0fd87e49247a59a4 228 SUPERFAMILY SSF53254 1 220 1.96E-69 T 28-03-2018 IPR029033 Histidine phosphatase superfamily RK98_RS08000 5bad2700c2674ceb0fd87e49247a59a4 228 SMART SM00855 3 189 1.3E-22 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 RK98_RS08000 5bad2700c2674ceb0fd87e49247a59a4 228 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 1 228 42.446 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 RK98_RS02240 7ac059b7cfa3616058ed9311504b4ed1 253 Pfam PF06738 Putative threonine/serine exporter 15 252 6.7E-71 T 28-03-2018 IPR010619 Putative threonine/serine exporter RK98_RS13770 f12170427f79fd1bbc020025a823a90e 228 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 126 194 2.5E-21 T 28-03-2018 IPR006343 DnaD domain RK98_RS13770 f12170427f79fd1bbc020025a823a90e 228 Gene3D G3DSA:1.10.10.630 120 196 2.2E-21 T 28-03-2018 IPR034829 DnaD-like domain RK98_RS13770 f12170427f79fd1bbc020025a823a90e 228 SUPERFAMILY SSF158499 125 191 3.14E-19 T 28-03-2018 IPR006343 DnaD domain RK98_RS13770 f12170427f79fd1bbc020025a823a90e 228 Pfam PF07261 Replication initiation and membrane attachment 126 195 1.5E-20 T 28-03-2018 IPR006343 DnaD domain RK98_RS01385 fb3f2e44dfd57faaa59f7d559ab810a2 273 TIGRFAM TIGR00552 nadE: NAD+ synthetase 22 263 1.2E-69 T 28-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 RK98_RS01385 fb3f2e44dfd57faaa59f7d559ab810a2 273 Gene3D G3DSA:3.40.50.620 3 271 7.4E-56 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold RK98_RS01385 fb3f2e44dfd57faaa59f7d559ab810a2 273 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 267 29.757 T 28-03-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 RK98_RS01385 fb3f2e44dfd57faaa59f7d559ab810a2 273 SUPERFAMILY SSF52402 4 268 1.06E-76 T 28-03-2018 RK98_RS01385 fb3f2e44dfd57faaa59f7d559ab810a2 273 Pfam PF02540 NAD synthase 24 263 6.1E-67 T 28-03-2018 IPR022310 NAD/GMP synthase RK98_RS09140 08044b37f41446138da7e4c2b502ea1f 141 Gene3D G3DSA:3.10.20.120 47 140 4.8E-18 T 28-03-2018 RK98_RS09140 08044b37f41446138da7e4c2b502ea1f 141 SUPERFAMILY SSF54334 42 139 1.31E-5 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS09140 08044b37f41446138da7e4c2b502ea1f 141 Pfam PF03642 MAP domain 47 134 5.1E-33 T 28-03-2018 IPR005298 MAP domain RK98_RS03680 31ca08c583ce0f5ed5c89e5c77e2f193 279 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 3 223 35.726 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS03680 31ca08c583ce0f5ed5c89e5c77e2f193 279 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 3 276 3.3E-82 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS03680 31ca08c583ce0f5ed5c89e5c77e2f193 279 Gene3D G3DSA:3.40.1010.10 1 111 3.7E-42 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS03680 31ca08c583ce0f5ed5c89e5c77e2f193 279 PIRSF PIRSF005917 1 279 5.8E-100 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS03680 31ca08c583ce0f5ed5c89e5c77e2f193 279 SUPERFAMILY SSF53790 2 221 1.11E-76 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS03680 31ca08c583ce0f5ed5c89e5c77e2f193 279 Gene3D G3DSA:3.30.950.10 112 226 3.7E-34 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS03680 31ca08c583ce0f5ed5c89e5c77e2f193 279 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 81 92 - T 28-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 RK98_RS03680 31ca08c583ce0f5ed5c89e5c77e2f193 279 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 202 1.8E-33 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS04755 5a06a7017a7e7e0b0440397cfda5eaca 161 Pfam PF04634 Protein of unknown function, DUF600 7 150 2.1E-46 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04755 5a06a7017a7e7e0b0440397cfda5eaca 161 TIGRFAM TIGR01741 staph_tand_hypo: conserved hypothetical protein 1 156 9.3E-76 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS04755 5a06a7017a7e7e0b0440397cfda5eaca 161 Gene3D G3DSA:3.30.500.20 4 115 3.1E-33 T 28-03-2018 RK98_RS04755 5a06a7017a7e7e0b0440397cfda5eaca 161 SUPERFAMILY SSF160424 3 161 6.54E-56 T 28-03-2018 IPR006728 Protein of unknown function DUF600 RK98_RS13310 06f73303eab08a154dd508c1e3070d0e 468 SUPERFAMILY SSF56322 15 465 2.35E-125 T 28-03-2018 IPR005801 ADC synthase GO:0009058 RK98_RS13310 06f73303eab08a154dd508c1e3070d0e 468 PRINTS PR00095 Anthranilate synthase component I signature 307 320 1.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RK98_RS13310 06f73303eab08a154dd508c1e3070d0e 468 PRINTS PR00095 Anthranilate synthase component I signature 321 334 1.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RK98_RS13310 06f73303eab08a154dd508c1e3070d0e 468 PRINTS PR00095 Anthranilate synthase component I signature 416 430 1.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RK98_RS13310 06f73303eab08a154dd508c1e3070d0e 468 PRINTS PR00095 Anthranilate synthase component I signature 401 415 1.9E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RK98_RS13310 06f73303eab08a154dd508c1e3070d0e 468 Pfam PF04715 Anthranilate synthase component I, N terminal region 15 150 1.8E-26 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 RK98_RS13310 06f73303eab08a154dd508c1e3070d0e 468 Gene3D G3DSA:3.60.120.10 3 467 2.4E-132 T 28-03-2018 IPR005801 ADC synthase GO:0009058 RK98_RS13310 06f73303eab08a154dd508c1e3070d0e 468 Pfam PF00425 chorismate binding enzyme 200 459 1.7E-85 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal RK98_RS14760 f3c6a8d1d39d7d806aa22e470b90660f 151 Gene3D G3DSA:3.30.70.260 69 146 1.4E-10 T 28-03-2018 RK98_RS14760 f3c6a8d1d39d7d806aa22e470b90660f 151 SUPERFAMILY SSF55021 72 147 1.63E-9 T 28-03-2018 RK98_RS14760 f3c6a8d1d39d7d806aa22e470b90660f 151 PIRSF PIRSF025624 1 150 4.7E-63 T 28-03-2018 IPR008310 UPF0735 ACT domain-containing protein RK98_RS14760 f3c6a8d1d39d7d806aa22e470b90660f 151 Hamap MF_00707 UPF0735 ACT domain-containing protein . 5 150 28.289 T 28-03-2018 IPR008310 UPF0735 ACT domain-containing protein RK98_RS06050 3a005c5d9c3ea91391713fea7aede43a 260 Gene3D G3DSA:3.30.460.10 8 152 2.5E-12 T 28-03-2018 RK98_RS06050 3a005c5d9c3ea91391713fea7aede43a 260 Pfam PF13427 Domain of unknown function (DUF4111) 153 253 1.2E-33 T 28-03-2018 IPR025184 Domain of unknown function DUF4111 RK98_RS06050 3a005c5d9c3ea91391713fea7aede43a 260 PIRSF PIRSF000819 12 259 1.9E-71 T 28-03-2018 IPR024172 Streptomycin 3''-adenylyltransferase GO:0009012|GO:0046677 RK98_RS06050 3a005c5d9c3ea91391713fea7aede43a 260 Pfam PF01909 Nucleotidyltransferase domain 16 100 6.3E-12 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RK98_RS06050 3a005c5d9c3ea91391713fea7aede43a 260 SUPERFAMILY SSF81301 17 102 1.74E-12 T 28-03-2018 RK98_RS14835 3a005c5d9c3ea91391713fea7aede43a 260 Gene3D G3DSA:3.30.460.10 8 152 2.5E-12 T 28-03-2018 RK98_RS14835 3a005c5d9c3ea91391713fea7aede43a 260 Pfam PF13427 Domain of unknown function (DUF4111) 153 253 1.2E-33 T 28-03-2018 IPR025184 Domain of unknown function DUF4111 RK98_RS14835 3a005c5d9c3ea91391713fea7aede43a 260 PIRSF PIRSF000819 12 259 1.9E-71 T 28-03-2018 IPR024172 Streptomycin 3''-adenylyltransferase GO:0009012|GO:0046677 RK98_RS14835 3a005c5d9c3ea91391713fea7aede43a 260 Pfam PF01909 Nucleotidyltransferase domain 16 100 6.3E-12 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 RK98_RS14835 3a005c5d9c3ea91391713fea7aede43a 260 SUPERFAMILY SSF81301 17 102 1.74E-12 T 28-03-2018 RK98_RS02925 f822f91138793e15e9d23ba9d3114f7f 124 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 11 115 6.2E-35 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS02925 f822f91138793e15e9d23ba9d3114f7f 124 SUPERFAMILY SSF46785 6 114 2.23E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02925 f822f91138793e15e9d23ba9d3114f7f 124 Gene3D G3DSA:1.10.10.10 2 124 3.2E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08785 9634d709f789489c31d84ddd2dbe9608 148 SUPERFAMILY SSF54690 4 145 1.44E-45 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RK98_RS08785 9634d709f789489c31d84ddd2dbe9608 148 Gene3D G3DSA:3.90.1170.40 1 148 2.4E-47 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RK98_RS08785 9634d709f789489c31d84ddd2dbe9608 148 Pfam PF02391 MoaE protein 9 117 1.1E-34 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 RK98_RS09195 da6454b36c564202efdbc78de6c62157 142 TIGRFAM TIGR01118 lacA: galactose-6-phosphate isomerase, LacA subunit 1 141 3.4E-86 T 28-03-2018 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26 RK98_RS09195 da6454b36c564202efdbc78de6c62157 142 SUPERFAMILY SSF89623 1 141 3.79E-43 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RK98_RS09195 da6454b36c564202efdbc78de6c62157 142 PIRSF PIRSF005384 1 142 2.5E-42 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RK98_RS09195 da6454b36c564202efdbc78de6c62157 142 Gene3D G3DSA:3.40.1400.10 1 142 1.7E-39 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RK98_RS09195 da6454b36c564202efdbc78de6c62157 142 Hamap MF_01555 Galactose-6-phosphate isomerase subunit LacA [lacA]. 1 142 42.232 T 28-03-2018 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26 RK98_RS09195 da6454b36c564202efdbc78de6c62157 142 Pfam PF02502 Ribose/Galactose Isomerase 3 138 6.0E-38 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RK98_RS09195 da6454b36c564202efdbc78de6c62157 142 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 140 1.9E-32 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 RK98_RS14830 20f866e6fc43b00080af44b66fd77b12 243 SMART SM00650 18 180 1.5E-66 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RK98_RS14830 20f866e6fc43b00080af44b66fd77b12 243 SUPERFAMILY SSF53335 10 241 2.5E-51 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS14830 20f866e6fc43b00080af44b66fd77b12 243 Gene3D G3DSA:1.10.8.100 185 243 1.0E-33 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 RK98_RS14830 20f866e6fc43b00080af44b66fd77b12 243 Gene3D G3DSA:3.40.50.150 2 184 1.2E-33 T 28-03-2018 RK98_RS14830 20f866e6fc43b00080af44b66fd77b12 243 Pfam PF00398 Ribosomal RNA adenine dimethylase 1 239 2.1E-75 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RK98_RS14830 20f866e6fc43b00080af44b66fd77b12 243 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 34 61 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RK98_RS06055 20f866e6fc43b00080af44b66fd77b12 243 SMART SM00650 18 180 1.5E-66 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 RK98_RS06055 20f866e6fc43b00080af44b66fd77b12 243 SUPERFAMILY SSF53335 10 241 2.5E-51 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS06055 20f866e6fc43b00080af44b66fd77b12 243 Gene3D G3DSA:1.10.8.100 185 243 1.0E-33 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 RK98_RS06055 20f866e6fc43b00080af44b66fd77b12 243 Gene3D G3DSA:3.40.50.150 2 184 1.2E-33 T 28-03-2018 RK98_RS06055 20f866e6fc43b00080af44b66fd77b12 243 Pfam PF00398 Ribosomal RNA adenine dimethylase 1 239 2.1E-75 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm RK98_RS06055 20f866e6fc43b00080af44b66fd77b12 243 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 34 61 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 RK98_RS07665 62c961a75ff515a10b76489884aa2460 255 SMART SM00849 7 215 0.0074 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS07665 62c961a75ff515a10b76489884aa2460 255 Gene3D G3DSA:3.60.15.10 1 255 2.5E-27 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS07665 62c961a75ff515a10b76489884aa2460 255 Pfam PF12706 Beta-lactamase superfamily domain 19 216 9.8E-14 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS07665 62c961a75ff515a10b76489884aa2460 255 SUPERFAMILY SSF56281 1 253 6.55E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS06405 05c17767e1ffe18ab9724ecf66f70911 264 Gene3D G3DSA:3.30.2140.10 1 147 5.5E-27 T 28-03-2018 RK98_RS06405 05c17767e1ffe18ab9724ecf66f70911 264 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 2.2E-10 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 RK98_RS06405 05c17767e1ffe18ab9724ecf66f70911 264 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 2.2E-10 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 RK98_RS06405 05c17767e1ffe18ab9724ecf66f70911 264 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 2.2E-10 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 RK98_RS06405 05c17767e1ffe18ab9724ecf66f70911 264 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 2.2E-10 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 RK98_RS06405 05c17767e1ffe18ab9724ecf66f70911 264 Gene3D G3DSA:3.30.2140.10 170 263 4.4E-10 T 28-03-2018 RK98_RS06405 05c17767e1ffe18ab9724ecf66f70911 264 Pfam PF00797 N-acetyltransferase 22 257 1.2E-71 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 RK98_RS06405 05c17767e1ffe18ab9724ecf66f70911 264 SUPERFAMILY SSF54001 1 262 2.35E-69 T 28-03-2018 RK98_RS04575 1d014875acbf6a6ca30bdc246134d9c3 139 Pfam PF12802 MarR family 28 88 1.3E-9 T 28-03-2018 RK98_RS04575 1d014875acbf6a6ca30bdc246134d9c3 139 SUPERFAMILY SSF46785 6 135 4.8E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04575 1d014875acbf6a6ca30bdc246134d9c3 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 3.6E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS04575 1d014875acbf6a6ca30bdc246134d9c3 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 3.6E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS04575 1d014875acbf6a6ca30bdc246134d9c3 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 3.6E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS04575 1d014875acbf6a6ca30bdc246134d9c3 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 3.6E-9 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS04575 1d014875acbf6a6ca30bdc246134d9c3 139 Gene3D G3DSA:1.10.10.10 2 137 1.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04575 1d014875acbf6a6ca30bdc246134d9c3 139 SMART SM00347 22 124 7.2E-19 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS04785 059ddc4feba7ae22662ffb97a4da6a62 203 Pfam PF16883 Domain of unknown function (DUF5080) 4 200 1.0E-101 T 28-03-2018 IPR031689 Protein of unknown function DUF5080 RK98_RS10690 dd3681940dcf22ba88182f5246db555f 139 TIGRFAM TIGR01636 phage_rinA: phage transcriptional regulator, RinA family 3 136 4.0E-35 T 28-03-2018 IPR006523 Transcription activator RinA RK98_RS10690 dd3681940dcf22ba88182f5246db555f 139 Gene3D G3DSA:1.10.10.10 60 139 5.8E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS11910 7a1be7960a1f38234e6be1c465754a1c 153 Pfam PF04238 Protein of unknown function (DUF420) 6 134 8.5E-37 T 28-03-2018 IPR007352 Protein of unknown function DUF420 RK98_RS11910 7a1be7960a1f38234e6be1c465754a1c 153 Gene3D G3DSA:1.20.120.80 1 138 5.7E-12 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS12990 0af740e2f8adf766e86504b1ab62faec 61 Gene3D G3DSA:1.10.260.40 2 60 2.3E-5 T 28-03-2018 RK98_RS12990 0af740e2f8adf766e86504b1ab62faec 61 SUPERFAMILY SSF47413 10 56 1.0E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS05200 c9451bb6543425ed7093baaaec468a7b 322 Pfam PF07582 AP endonuclease family 2 C terminus 269 322 3.6E-21 T 28-03-2018 IPR011418 AP endonuclease, family 2, C-terminal RK98_RS05200 c9451bb6543425ed7093baaaec468a7b 322 Pfam PF01261 Xylose isomerase-like TIM barrel 19 231 1.2E-30 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain RK98_RS05200 c9451bb6543425ed7093baaaec468a7b 322 SUPERFAMILY SSF51658 1 309 7.59E-50 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain RK98_RS05200 c9451bb6543425ed7093baaaec468a7b 322 Gene3D G3DSA:3.20.20.150 1 320 1.5E-48 T 28-03-2018 RK98_RS02730 7604f3312f854836ca0d5d0f34121b6d 347 Gene3D G3DSA:3.40.50.1820 25 326 3.3E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS02730 7604f3312f854836ca0d5d0f34121b6d 347 Pfam PF07859 alpha/beta hydrolase fold 85 293 1.3E-31 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 RK98_RS02730 7604f3312f854836ca0d5d0f34121b6d 347 SUPERFAMILY SSF53474 63 319 4.3E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS07255 6969021a14e8c51b40eff97bce73f4bc 72 Pfam PF06855 YozE SAM-like fold 2 67 1.8E-18 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS07255 6969021a14e8c51b40eff97bce73f4bc 72 SUPERFAMILY SSF140652 2 70 6.67E-19 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS07255 6969021a14e8c51b40eff97bce73f4bc 72 Gene3D G3DSA:1.10.150.260 1 68 1.0E-17 T 28-03-2018 IPR023089 YozE SAM-like domain RK98_RS08450 e0beeb30baf7462bd0bae6a89d55c2a7 228 SUPERFAMILY SSF75445 133 209 1.14E-18 T 28-03-2018 RK98_RS08450 e0beeb30baf7462bd0bae6a89d55c2a7 228 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 53 222 1.8E-59 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RK98_RS08450 e0beeb30baf7462bd0bae6a89d55c2a7 228 Gene3D G3DSA:3.40.50.1360 6 142 7.5E-36 T 28-03-2018 RK98_RS08450 e0beeb30baf7462bd0bae6a89d55c2a7 228 Gene3D G3DSA:3.30.70.260 143 206 3.7E-18 T 28-03-2018 RK98_RS08450 e0beeb30baf7462bd0bae6a89d55c2a7 228 SUPERFAMILY SSF100950 15 151 3.49E-37 T 28-03-2018 RK98_RS08450 e0beeb30baf7462bd0bae6a89d55c2a7 228 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 8 224 7.5E-79 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RK98_RS08450 e0beeb30baf7462bd0bae6a89d55c2a7 228 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 4 226 29.064 T 28-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 RK98_RS15065 4021e516e7c7c2b6db64d64cd8abd296 79 Pfam PF12958 Protein of unknown function (DUF3847) 8 64 2.9E-11 T 28-03-2018 IPR024215 Protein of unknown function DUF3847 RK98_RS01750 60c60ac8716e8802be3bb6da745b42ad 80 Pfam PF06194 Phage Conserved Open Reading Frame 51 1 80 1.7E-57 T 28-03-2018 IPR009338 Protein of unknown function Orf51 RK98_RS01530 dafb166529decf55e144eb808bed0610 476 Pfam PF03642 MAP domain 51 138 2.6E-34 T 28-03-2018 IPR005298 MAP domain RK98_RS01530 dafb166529decf55e144eb808bed0610 476 Pfam PF03642 MAP domain 269 356 1.5E-35 T 28-03-2018 IPR005298 MAP domain RK98_RS01530 dafb166529decf55e144eb808bed0610 476 Pfam PF03642 MAP domain 160 247 3.9E-35 T 28-03-2018 IPR005298 MAP domain RK98_RS01530 dafb166529decf55e144eb808bed0610 476 Pfam PF03642 MAP domain 374 461 5.1E-37 T 28-03-2018 IPR005298 MAP domain RK98_RS01530 dafb166529decf55e144eb808bed0610 476 Gene3D G3DSA:3.10.20.120 361 466 3.3E-23 T 28-03-2018 RK98_RS01530 dafb166529decf55e144eb808bed0610 476 Gene3D G3DSA:3.10.20.120 143 251 1.7E-25 T 28-03-2018 RK98_RS01530 dafb166529decf55e144eb808bed0610 476 Gene3D G3DSA:3.10.20.120 36 142 9.0E-24 T 28-03-2018 RK98_RS01530 dafb166529decf55e144eb808bed0610 476 Gene3D G3DSA:3.10.20.120 252 360 3.0E-21 T 28-03-2018 RK98_RS00045 cf47ca8d811f0ba40d675ced39d92e6c 313 SUPERFAMILY SSF64182 16 284 8.63E-70 T 28-03-2018 RK98_RS00045 cf47ca8d811f0ba40d675ced39d92e6c 313 Pfam PF01368 DHH family 18 155 2.9E-14 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 RK98_RS00045 cf47ca8d811f0ba40d675ced39d92e6c 313 Pfam PF02272 DHHA1 domain 184 309 4.4E-11 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 RK98_RS00045 cf47ca8d811f0ba40d675ced39d92e6c 313 Gene3D G3DSA:3.90.1640.10 1 199 3.1E-43 T 28-03-2018 RK98_RS06375 d2610605ff9bfa1321c5732f950d519a 189 Pfam PF01381 Helix-turn-helix 7 61 1.0E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS06375 d2610605ff9bfa1321c5732f950d519a 189 SUPERFAMILY SSF47413 3 65 5.12E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS06375 d2610605ff9bfa1321c5732f950d519a 189 SMART SM00530 6 61 1.5E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS06375 d2610605ff9bfa1321c5732f950d519a 189 Gene3D G3DSA:1.10.260.40 1 155 2.6E-21 T 28-03-2018 RK98_RS13065 779e783d385bb4150505fb43a00438ee 177 ProSitePatterns PS01284 Thermonuclease family signature 2. 118 128 - T 28-03-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 RK98_RS13065 779e783d385bb4150505fb43a00438ee 177 Pfam PF00565 Staphylococcal nuclease homologue 70 177 1.0E-32 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RK98_RS13065 779e783d385bb4150505fb43a00438ee 177 SMART SM00318 45 177 7.1E-40 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RK98_RS13065 779e783d385bb4150505fb43a00438ee 177 Gene3D G3DSA:2.40.50.90 43 177 3.7E-36 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain RK98_RS13065 779e783d385bb4150505fb43a00438ee 177 SUPERFAMILY SSF50199 46 176 2.88E-37 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold RK98_RS02765 fce09af1d11ed28f21bdfbe132c971ff 334 Gene3D G3DSA:1.10.3470.10 9 334 4.7E-64 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS02765 fce09af1d11ed28f21bdfbe132c971ff 334 SUPERFAMILY SSF81345 9 329 8.37E-78 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS02765 fce09af1d11ed28f21bdfbe132c971ff 334 Pfam PF01032 FecCD transport family 22 329 5.9E-88 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RK98_RS09885 3d5d430912c0ed7f4b362bca9003f56c 527 Pfam PF03703 Bacterial PH domain 282 367 1.7E-8 T 28-03-2018 IPR005182 Domain of unknown function DUF304 RK98_RS09885 3d5d430912c0ed7f4b362bca9003f56c 527 Pfam PF03703 Bacterial PH domain 69 143 3.2E-14 T 28-03-2018 IPR005182 Domain of unknown function DUF304 RK98_RS09885 3d5d430912c0ed7f4b362bca9003f56c 527 PIRSF PIRSF026631 1 526 5.2E-102 T 28-03-2018 IPR014529 Uncharacterised conserved protein UCP026631 RK98_RS14895 daa77e7d0bd794ee30e64a281083b603 428 Gene3D G3DSA:3.90.1150.10 1 166 1.8E-38 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS14895 daa77e7d0bd794ee30e64a281083b603 428 Pfam PF00202 Aminotransferase class-III 33 397 2.6E-73 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS14895 daa77e7d0bd794ee30e64a281083b603 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 RK98_RS14895 daa77e7d0bd794ee30e64a281083b603 428 Gene3D G3DSA:3.90.1150.10 315 427 1.8E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS14895 daa77e7d0bd794ee30e64a281083b603 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 424 1.7E-188 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 RK98_RS14895 daa77e7d0bd794ee30e64a281083b603 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 426 100.123 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 RK98_RS14895 daa77e7d0bd794ee30e64a281083b603 428 SUPERFAMILY SSF53383 1 425 1.87E-127 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS14895 daa77e7d0bd794ee30e64a281083b603 428 Gene3D G3DSA:3.40.640.10 172 314 1.7E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS04680 de05a96a4e7be42d6e42215f7bd26c19 510 Pfam PF00474 Sodium:solute symporter family 39 442 4.0E-41 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RK98_RS04680 de05a96a4e7be42d6e42215f7bd26c19 510 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 442 2.0E-66 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 RK98_RS06390 2f8b111f567466c2af134fd9d3dd2293 626 PIRSF PIRSF018968 1 626 2.7E-97 T 28-03-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 RK98_RS06390 2f8b111f567466c2af134fd9d3dd2293 626 Pfam PF02687 FtsX-like permease family 85 178 2.4E-9 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RK98_RS08730 02cb14228e69575141823292de8fc8be 184 Pfam PF02632 BioY family 29 171 6.2E-29 T 28-03-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 RK98_RS08730 02cb14228e69575141823292de8fc8be 184 PIRSF PIRSF016661 1 181 6.5E-34 T 28-03-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 RK98_RS08395 7ef439eea375aca530826ba5096aab33 402 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 401 22.284 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 RK98_RS08395 7ef439eea375aca530826ba5096aab33 402 Pfam PF03616 Sodium/glutamate symporter 2 370 1.2E-151 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 RK98_RS08395 7ef439eea375aca530826ba5096aab33 402 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 399 3.2E-107 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 RK98_RS04955 6b8ec94b9dc4d930925b986c612cf80b 234 Gene3D G3DSA:3.40.1410.10 73 234 1.8E-27 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RK98_RS04955 6b8ec94b9dc4d930925b986c612cf80b 234 SMART SM00345 7 66 3.3E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS04955 6b8ec94b9dc4d930925b986c612cf80b 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 6.1E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS04955 6b8ec94b9dc4d930925b986c612cf80b 234 Pfam PF07702 UTRA domain 90 222 1.2E-25 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RK98_RS04955 6b8ec94b9dc4d930925b986c612cf80b 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 4.6E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS04955 6b8ec94b9dc4d930925b986c612cf80b 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 4.6E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 RK98_RS04955 6b8ec94b9dc4d930925b986c612cf80b 234 Gene3D G3DSA:1.10.10.10 2 68 4.2E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04955 6b8ec94b9dc4d930925b986c612cf80b 234 SUPERFAMILY SSF64288 75 230 1.4E-38 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain RK98_RS04955 6b8ec94b9dc4d930925b986c612cf80b 234 SUPERFAMILY SSF46785 3 75 6.28E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04955 6b8ec94b9dc4d930925b986c612cf80b 234 SMART SM00866 87 227 8.5E-24 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 RK98_RS13160 d43c5e2c327da4c492dade86726be64f 79 Hamap MF_01103 UPF0291 protein . 1 61 16.394 T 28-03-2018 IPR009242 Protein of unknown function DUF896 RK98_RS13160 d43c5e2c327da4c492dade86726be64f 79 SUPERFAMILY SSF158221 7 43 7.19E-13 T 28-03-2018 RK98_RS13160 d43c5e2c327da4c492dade86726be64f 79 Gene3D G3DSA:1.10.287.540 6 57 4.1E-24 T 28-03-2018 RK98_RS13160 d43c5e2c327da4c492dade86726be64f 79 Pfam PF05979 Bacterial protein of unknown function (DUF896) 8 69 7.9E-32 T 28-03-2018 IPR009242 Protein of unknown function DUF896 RK98_RS05365 162eefa8a59d7d168431ebcdb9e7d90b 185 Pfam PF00857 Isochorismatase family 7 179 7.2E-39 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RK98_RS05365 162eefa8a59d7d168431ebcdb9e7d90b 185 Gene3D G3DSA:3.40.50.850 2 185 9.7E-42 T 28-03-2018 RK98_RS05365 162eefa8a59d7d168431ebcdb9e7d90b 185 SUPERFAMILY SSF52499 2 184 4.19E-50 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RK98_RS03690 540aabc9dffbe8c7d65bb6747d9c48e7 241 SUPERFAMILY SSF53335 13 211 9.52E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS03690 540aabc9dffbe8c7d65bb6747d9c48e7 241 Pfam PF05175 Methyltransferase small domain 31 171 9.3E-15 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 RK98_RS03690 540aabc9dffbe8c7d65bb6747d9c48e7 241 Gene3D G3DSA:3.40.50.150 6 240 6.4E-34 T 28-03-2018 RK98_RS07880 3696db23e11f6e616830fb51e4572b38 403 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 12 387 7.1E-72 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 RK98_RS07880 3696db23e11f6e616830fb51e4572b38 403 Gene3D G3DSA:1.20.1250.20 3 201 2.1E-26 T 28-03-2018 RK98_RS07880 3696db23e11f6e616830fb51e4572b38 403 SUPERFAMILY SSF103473 5 398 2.09E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS07880 3696db23e11f6e616830fb51e4572b38 403 Gene3D G3DSA:1.20.1250.20 202 402 1.5E-18 T 28-03-2018 RK98_RS07880 3696db23e11f6e616830fb51e4572b38 403 Pfam PF07690 Major Facilitator Superfamily 22 362 2.2E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS00815 0cbdf2107aea96beffceb281096828c6 121 Gene3D G3DSA:1.20.120.20 28 121 2.0E-4 T 28-03-2018 RK98_RS07265 b961618bb3bd220820911ebacaf3f086 131 Pfam PF03788 LrgA family 22 113 7.8E-24 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 RK98_RS07265 b961618bb3bd220820911ebacaf3f086 131 Hamap MF_01143 Holin-like protein CidA [cidA]. 4 122 23.659 T 28-03-2018 IPR023760 Holin-like protein CidA GO:0016021 RK98_RS14520 e84b671ee6f9af06aa1cba98cf1e0662 175 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 6 168 2.0E-49 T 28-03-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like RK98_RS14520 e84b671ee6f9af06aa1cba98cf1e0662 175 Pfam PF13419 Haloacid dehalogenase-like hydrolase 48 139 4.9E-9 T 28-03-2018 IPR023214 HAD-like domain RK98_RS14520 e84b671ee6f9af06aa1cba98cf1e0662 175 Gene3D G3DSA:3.40.50.1000 18 154 7.0E-23 T 28-03-2018 IPR023214 HAD-like domain RK98_RS14520 e84b671ee6f9af06aa1cba98cf1e0662 175 SUPERFAMILY SSF56784 5 153 3.2E-24 T 28-03-2018 IPR023214 HAD-like domain RK98_RS14520 e84b671ee6f9af06aa1cba98cf1e0662 175 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 31 141 2.1E-23 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 RK98_RS07340 6f8ae67158bc63a2c79dc23929b62db7 206 Pfam PF04203 Sortase family 76 204 2.9E-21 T 28-03-2018 IPR005754 Sortase family RK98_RS07340 6f8ae67158bc63a2c79dc23929b62db7 206 Gene3D G3DSA:2.40.260.10 27 206 1.2E-30 T 28-03-2018 IPR023365 Sortase domain RK98_RS07340 6f8ae67158bc63a2c79dc23929b62db7 206 SUPERFAMILY SSF63817 14 206 9.68E-44 T 28-03-2018 IPR023365 Sortase domain RK98_RS07340 6f8ae67158bc63a2c79dc23929b62db7 206 TIGRFAM TIGR01076 sortase_fam: sortase 74 205 2.7E-49 T 28-03-2018 IPR005754 Sortase family RK98_RS02320 c4eebd38ff0275c24e9e48ccad3b1737 132 Hamap MF_00128 Protein NrdI [nrdI]. 1 124 28.443 T 28-03-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial RK98_RS02320 c4eebd38ff0275c24e9e48ccad3b1737 132 TIGRFAM TIGR00333 nrdI: nrdI protein 3 121 4.8E-34 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI RK98_RS02320 c4eebd38ff0275c24e9e48ccad3b1737 132 Pfam PF07972 NrdI Flavodoxin like 3 114 2.2E-34 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI RK98_RS02320 c4eebd38ff0275c24e9e48ccad3b1737 132 Gene3D G3DSA:3.40.50.360 1 123 9.0E-17 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS02320 c4eebd38ff0275c24e9e48ccad3b1737 132 PIRSF PIRSF005087 1 128 3.8E-41 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI RK98_RS02320 c4eebd38ff0275c24e9e48ccad3b1737 132 SUPERFAMILY SSF52218 2 121 2.07E-21 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS11285 00d64989484d6c6e6560ad63feb11c7b 328 PIRSF PIRSF007487 1 328 1.8E-83 T 28-03-2018 IPR021176 Competence-induced protein CoiA RK98_RS11285 00d64989484d6c6e6560ad63feb11c7b 328 Pfam PF06054 Competence protein CoiA-like family 6 308 4.0E-29 T 28-03-2018 IPR010330 Competence-induced protein CoiA-like RK98_RS06250 d7d6b523dc47afb7aa5ba4405d917c80 148 SUPERFAMILY SSF55653 57 147 7.59E-26 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal RK98_RS06250 d7d6b523dc47afb7aa5ba4405d917c80 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 4.8E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS06250 d7d6b523dc47afb7aa5ba4405d917c80 148 SUPERFAMILY SSF55658 1 56 1.29E-17 T 28-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal RK98_RS06250 d7d6b523dc47afb7aa5ba4405d917c80 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 3.2E-28 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal RK98_RS06250 d7d6b523dc47afb7aa5ba4405d917c80 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.35 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS06250 d7d6b523dc47afb7aa5ba4405d917c80 148 Gene3D G3DSA:3.40.5.10 1 49 1.2E-23 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS06250 d7d6b523dc47afb7aa5ba4405d917c80 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS06250 d7d6b523dc47afb7aa5ba4405d917c80 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 2.0E-44 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS06250 d7d6b523dc47afb7aa5ba4405d917c80 148 Gene3D G3DSA:3.10.430.100 63 147 6.0E-29 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal RK98_RS10880 edbfc675ac7a79fd6d66bdbaebc8ad5b 355 SUPERFAMILY SSF51412 5 354 6.41E-64 T 28-03-2018 RK98_RS10880 edbfc675ac7a79fd6d66bdbaebc8ad5b 355 Pfam PF03060 Nitronate monooxygenase 5 345 1.1E-90 T 28-03-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 RK98_RS10880 edbfc675ac7a79fd6d66bdbaebc8ad5b 355 Gene3D G3DSA:3.20.20.70 4 355 1.2E-48 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS00555 6ee5ff544c683191df9b3f593b0bdb02 113 Pfam PF13108 Protein of unknown function (DUF3969) 6 104 3.2E-30 T 28-03-2018 IPR025083 Protein of unknown function DUF3969 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 417 3.1E-181 T 28-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 SUPERFAMILY SSF47648 1 69 3.01E-23 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 Gene3D G3DSA:3.90.1170.30 338 423 2.2E-27 T 28-03-2018 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 SUPERFAMILY SSF52418 69 329 8.5E-94 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 4.8E-23 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 Gene3D G3DSA:1.20.970.10 1 66 2.5E-26 T 28-03-2018 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 1.1E-26 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 PIRSF PIRSF000478 1 432 1.6E-167 T 28-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 Gene3D G3DSA:3.40.1030.10 68 337 1.5E-96 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 Pfam PF00591 Glycosyl transferase family, a/b domain 77 306 2.3E-48 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 SUPERFAMILY SSF54680 331 431 2.49E-28 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 28-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS09540 81e65bbf61ace9f97afd2bd0c06d2c98 433 SMART SM00941 345 418 7.0E-31 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 RK98_RS05825 c508b1beb0fa3af2e11cdc424ed4fc9f 256 Pfam PF04507 Csa1 family 2 254 5.9E-124 T 28-03-2018 IPR007595 Csa1 family RK98_RS05825 c508b1beb0fa3af2e11cdc424ed4fc9f 256 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 2 252 1.2E-115 T 28-03-2018 IPR007595 Csa1 family RK98_RS03980 a205ba5f4107a41516432e98138f6a87 253 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 7 250 9.4E-109 T 28-03-2018 IPR007595 Csa1 family RK98_RS03980 a205ba5f4107a41516432e98138f6a87 253 Pfam PF04507 Csa1 family 9 252 4.8E-117 T 28-03-2018 IPR007595 Csa1 family RK98_RS07350 cceded538b0c618279abc2a84a2cf722 211 Gene3D G3DSA:3.40.50.300 1 210 1.3E-30 T 28-03-2018 RK98_RS07350 cceded538b0c618279abc2a84a2cf722 211 SMART SM00382 25 196 5.4E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS07350 cceded538b0c618279abc2a84a2cf722 211 Pfam PF00005 ABC transporter 17 144 2.9E-13 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS07350 cceded538b0c618279abc2a84a2cf722 211 SUPERFAMILY SSF52540 2 207 2.67E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS11035 839405c4bb391191e851919bf8a6baf6 159 PIRSF PIRSF019239 1 159 4.5E-43 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 RK98_RS11035 839405c4bb391191e851919bf8a6baf6 159 Pfam PF01899 Na+/H+ ion antiporter subunit 9 156 4.8E-42 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 RK98_RS11035 839405c4bb391191e851919bf8a6baf6 159 TIGRFAM TIGR00942 2a6301s05: multicomponent Na+:H+ antiporter 15 158 1.3E-69 T 28-03-2018 IPR004847 Na(+)/H(+) antiporter subunit E1 GO:0015297|GO:0015992|GO:0016021 RK98_RS11305 0b9b50efd0a33af256a50de9f953304e 197 SUPERFAMILY SSF55154 4 187 9.48E-32 T 28-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 RK98_RS11305 0b9b50efd0a33af256a50de9f953304e 197 PIRSF PIRSF012526 1 193 9.7E-78 T 28-03-2018 IPR009195 Uncharacterised protein family YjbK RK98_RS11305 0b9b50efd0a33af256a50de9f953304e 197 SMART SM01118 4 189 5.2E-19 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 RK98_RS11305 0b9b50efd0a33af256a50de9f953304e 197 Pfam PF01928 CYTH domain 4 186 4.2E-34 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 RK98_RS11305 0b9b50efd0a33af256a50de9f953304e 197 Gene3D G3DSA:2.40.320.10 2 195 1.6E-32 T 28-03-2018 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 Gene3D G3DSA:2.40.50.140 1 100 1.7E-21 T 28-03-2018 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 Pfam PF01336 OB-fold nucleic acid binding domain 16 95 6.8E-16 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 2 429 3.0E-164 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 Pfam PF00152 tRNA synthetases class II (D, K and N) 111 424 6.5E-83 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 385 399 3.0E-15 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 209 3.0E-15 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 180 192 3.0E-15 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 345 361 3.0E-15 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 Gene3D G3DSA:3.30.930.10 101 430 4.0E-93 T 28-03-2018 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 SUPERFAMILY SSF55681 110 424 4.56E-96 T 28-03-2018 RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 SUPERFAMILY SSF50249 9 102 7.28E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS13775 0b1e1787023aaadfdc9af8d90239bf4b 430 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 1 430 41.575 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 RK98_RS02405 21f50b2f14a59c22774338de0b2769db 334 SUPERFAMILY SSF50891 200 302 2.5E-5 T 28-03-2018 IPR029000 Cyclophilin-like domain RK98_RS02405 21f50b2f14a59c22774338de0b2769db 334 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 299 1.3E-69 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B RK98_RS02405 21f50b2f14a59c22774338de0b2769db 334 SMART SM00797 24 316 6.6E-108 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B RK98_RS02065 513a11c446e7e04268a06c415e76c239 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 252 41.248 T 28-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02065 513a11c446e7e04268a06c415e76c239 253 Gene3D G3DSA:3.20.20.70 1 253 3.3E-101 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS02065 513a11c446e7e04268a06c415e76c239 253 Pfam PF00121 Triosephosphate isomerase 5 248 5.8E-95 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02065 513a11c446e7e04268a06c415e76c239 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 242 7.8E-59 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02065 513a11c446e7e04268a06c415e76c239 253 SUPERFAMILY SSF51351 1 250 1.83E-91 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS02065 513a11c446e7e04268a06c415e76c239 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 28-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS08965 47a67d7dccc40b1166d4213862681d2d 122 Gene3D G3DSA:2.40.150.20 1 122 1.4E-51 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RK98_RS08965 47a67d7dccc40b1166d4213862681d2d 122 SMART SM01374 1 122 3.3E-84 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RK98_RS08965 47a67d7dccc40b1166d4213862681d2d 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 28-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08965 47a67d7dccc40b1166d4213862681d2d 122 SUPERFAMILY SSF50193 1 122 5.49E-50 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RK98_RS08965 47a67d7dccc40b1166d4213862681d2d 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 27.08 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RK98_RS08965 47a67d7dccc40b1166d4213862681d2d 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 5.4E-58 T 28-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 RK98_RS08965 47a67d7dccc40b1166d4213862681d2d 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.3E-53 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 RK98_RS06575 a68ac53a2e5b9d3feda8ed2a92ce3e81 186 Gene3D G3DSA:1.10.10.60 1 37 1.6E-15 T 28-03-2018 RK98_RS06575 a68ac53a2e5b9d3feda8ed2a92ce3e81 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 49 1.2E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS06575 a68ac53a2e5b9d3feda8ed2a92ce3e81 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 1.2E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS06575 a68ac53a2e5b9d3feda8ed2a92ce3e81 186 Gene3D G3DSA:1.10.10.60 38 152 9.2E-6 T 28-03-2018 RK98_RS06575 a68ac53a2e5b9d3feda8ed2a92ce3e81 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 49 4.5E-16 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS06575 a68ac53a2e5b9d3feda8ed2a92ce3e81 186 SUPERFAMILY SSF46689 2 64 2.54E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 Pfam PF00175 Oxidoreductase NAD-binding domain 484 590 3.7E-18 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 SUPERFAMILY SSF63380 254 472 1.73E-58 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 Gene3D G3DSA:3.40.50.360 42 246 7.0E-44 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 SUPERFAMILY SSF52218 86 230 3.43E-50 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 Pfam PF00258 Flavodoxin 91 222 2.8E-33 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PIRSF PIRSF000207 1 626 1.5E-272 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 SUPERFAMILY SSF52343 471 626 1.7E-49 T 28-03-2018 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 Pfam PF00667 FAD binding domain 256 449 1.2E-25 T 28-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 575 583 9.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 552 568 9.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 294 304 9.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 413 420 9.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 508 517 9.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 446 455 9.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 483 502 9.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 521 532 9.7E-27 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 Gene3D G3DSA:3.40.50.80 480 626 2.0E-39 T 28-03-2018 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 Gene3D G3DSA:2.40.30.10 247 466 3.6E-47 T 28-03-2018 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00369 Flavodoxin signature 90 103 3.2E-12 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00369 Flavodoxin signature 194 213 3.2E-12 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00369 Flavodoxin signature 170 180 3.2E-12 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 PRINTS PR00369 Flavodoxin signature 138 149 3.2E-12 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 RK98_RS06830 1383524527b2d4cd9080e89ec6538fb4 626 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 7 626 3.4E-214 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 RK98_RS10965 f2fa5aa0f17fd6376641d41a831da444 78 Gene3D G3DSA:1.10.1200.10 1 78 9.2E-10 T 28-03-2018 RK98_RS10965 f2fa5aa0f17fd6376641d41a831da444 78 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 76 7.2E-41 T 28-03-2018 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13 RK98_RS10965 f2fa5aa0f17fd6376641d41a831da444 78 SUPERFAMILY SSF47336 2 77 3.4E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain RK98_RS10965 f2fa5aa0f17fd6376641d41a831da444 78 Pfam PF00550 Phosphopantetheine attachment site 5 74 2.0E-8 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain RK98_RS10965 f2fa5aa0f17fd6376641d41a831da444 78 Hamap MF_00565 D-alanine--poly(phosphoribitol) ligase subunit 2 [dltC]. 1 78 47.099 T 28-03-2018 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13 RK98_RS03230 6e509b8a7f09201b19055b291add6952 188 Pfam PF03358 NADPH-dependent FMN reductase 1 141 7.5E-29 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 RK98_RS03230 6e509b8a7f09201b19055b291add6952 188 Gene3D G3DSA:3.40.50.360 1 184 2.6E-30 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS03230 6e509b8a7f09201b19055b291add6952 188 SUPERFAMILY SSF52218 1 179 4.84E-33 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS09430 0cf5493a7da501a9d329593fa241665d 144 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 48 64 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS09430 0cf5493a7da501a9d329593fa241665d 144 SUPERFAMILY SSF55804 3 141 6.93E-41 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS09430 0cf5493a7da501a9d329593fa241665d 144 Gene3D G3DSA:3.40.930.10 1 143 8.1E-37 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS09430 0cf5493a7da501a9d329593fa241665d 144 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 141 1.3E-36 T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS03965 26e9fe5303111e30d190681a9fca4744 263 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 259 2.1E-106 T 28-03-2018 IPR007595 Csa1 family RK98_RS03965 26e9fe5303111e30d190681a9fca4744 263 Pfam PF04507 Csa1 family 1 260 1.5E-106 T 28-03-2018 IPR007595 Csa1 family RK98_RS01680 27b36ba1ec4d3020901d4e17a0ab34af 381 SUPERFAMILY SSF56563 84 362 3.01E-16 T 28-03-2018 RK98_RS01680 27b36ba1ec4d3020901d4e17a0ab34af 381 Gene3D G3DSA:3.30.2400.10 112 248 7.0E-15 T 28-03-2018 RK98_RS01680 27b36ba1ec4d3020901d4e17a0ab34af 381 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 79 215 1.4E-12 T 28-03-2018 IPR024455 Phage capsid RK98_RS01680 27b36ba1ec4d3020901d4e17a0ab34af 381 Pfam PF05065 Phage capsid family 87 274 3.6E-12 T 28-03-2018 IPR024455 Phage capsid RK98_RS08880 61c1cea234d6210de4582c438997a369 287 SUPERFAMILY SSF103481 41 140 4.05E-6 T 28-03-2018 RK98_RS08880 61c1cea234d6210de4582c438997a369 287 Pfam PF06800 Sugar transport protein 7 284 1.3E-98 T 28-03-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 RK98_RS08880 61c1cea234d6210de4582c438997a369 287 SUPERFAMILY SSF103481 194 280 4.05E-7 T 28-03-2018 RK98_RS03755 d410a0dd6f29849a01affcd842fc1e0e 105 Pfam PF02575 YbaB/EbfC DNA-binding family 11 101 1.8E-32 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family RK98_RS03755 d410a0dd6f29849a01affcd842fc1e0e 105 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 4 105 9.3E-30 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family RK98_RS03755 d410a0dd6f29849a01affcd842fc1e0e 105 PIRSF PIRSF004555 3 105 3.9E-38 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family RK98_RS03755 d410a0dd6f29849a01affcd842fc1e0e 105 SUPERFAMILY SSF82607 11 105 4.19E-33 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family RK98_RS03755 d410a0dd6f29849a01affcd842fc1e0e 105 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 23.104 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family RK98_RS03755 d410a0dd6f29849a01affcd842fc1e0e 105 Gene3D G3DSA:3.30.1310.10 1 105 5.2E-36 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family RK98_RS05545 265ceec992b4b34fd3ec943c4113b3ac 228 Pfam PF13614 AAA domain 45 171 1.5E-15 T 28-03-2018 IPR025669 AAA domain RK98_RS05545 265ceec992b4b34fd3ec943c4113b3ac 228 SUPERFAMILY SSF52540 42 221 1.14E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05545 265ceec992b4b34fd3ec943c4113b3ac 228 Gene3D G3DSA:3.40.50.300 40 223 2.9E-36 T 28-03-2018 RK98_RS05545 265ceec992b4b34fd3ec943c4113b3ac 228 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 23 226 3.2E-94 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 RK98_RS05445 af7889710688af5f0d02177beb1192f4 170 Pfam PF14026 Protein of unknown function (DUF4242) 95 167 1.3E-22 T 28-03-2018 IPR025336 Protein of unknown function DUF4242 RK98_RS10875 9d4d78e4b679c47151d5fd652cc30b42 346 Gene3D G3DSA:3.20.20.70 123 334 3.7E-26 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS10875 9d4d78e4b679c47151d5fd652cc30b42 346 Pfam PF01595 Domain of unknown function DUF21 3 177 4.9E-46 T 28-03-2018 IPR002550 Domain of unknown function DUF21 RK98_RS10875 9d4d78e4b679c47151d5fd652cc30b42 346 SUPERFAMILY SSF54631 183 314 7.96E-21 T 28-03-2018 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 403 420 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 430 25.075 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 268 289 2.3E-23 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 403 416 2.3E-23 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 2.3E-23 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 193 211 2.3E-23 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 371 389 2.3E-23 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 389 403 2.3E-23 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 Gene3D G3DSA:3.40.50.10490 1 60 5.6E-9 T 28-03-2018 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 Gene3D G3DSA:3.40.50.10490 61 202 7.1E-44 T 28-03-2018 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 197 210 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 Gene3D G3DSA:3.40.50.10490 203 429 2.8E-74 T 28-03-2018 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 SUPERFAMILY SSF53697 4 442 6.02E-139 T 28-03-2018 RK98_RS11105 a4d15ea3a1eac74c31f62a2cd600dc72 443 Pfam PF00342 Phosphoglucose isomerase 76 292 5.6E-19 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 RK98_RS05705 7be06a9836bd2e0d76771ebfa31d000f 578 Pfam PF06276 Ferric iron reductase FhuF-like transporter 392 551 2.1E-25 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain RK98_RS05705 7be06a9836bd2e0d76771ebfa31d000f 578 Pfam PF04183 IucA / IucC family 135 369 6.1E-49 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 RK98_RS14615 e5ce1636d21b5d68b4da005e242bc952 86 PIRSF PIRSF037258 1 86 3.5E-42 T 28-03-2018 IPR009309 Uncharacterised protein family UPF0297 RK98_RS14615 e5ce1636d21b5d68b4da005e242bc952 86 Hamap MF_01507 UPF0297 protein . 1 84 25.834 T 28-03-2018 IPR009309 Uncharacterised protein family UPF0297 RK98_RS14615 e5ce1636d21b5d68b4da005e242bc952 86 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 82 2.6E-33 T 28-03-2018 IPR009309 Uncharacterised protein family UPF0297 RK98_RS09725 effe9cdfc7fa3c7f16759f99e2e332f4 77 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 10 74 2.6E-17 T 28-03-2018 IPR009526 Protein of unknown function DUF1146 RK98_RS09725 effe9cdfc7fa3c7f16759f99e2e332f4 77 Pfam PF06612 Protein of unknown function (DUF1146) 17 62 3.6E-20 T 28-03-2018 IPR009526 Protein of unknown function DUF1146 RK98_RS09485 8574d6d818d04f6c06d3f56b6faf05a1 325 Gene3D G3DSA:1.20.1510.10 17 215 3.2E-60 T 28-03-2018 RK98_RS09485 8574d6d818d04f6c06d3f56b6faf05a1 325 SUPERFAMILY SSF161111 18 216 4.71E-59 T 28-03-2018 RK98_RS09485 8574d6d818d04f6c06d3f56b6faf05a1 325 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 296 5.5E-99 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RK98_RS09485 8574d6d818d04f6c06d3f56b6faf05a1 325 Gene3D G3DSA:3.30.70.1350 217 299 7.4E-14 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain RK98_RS09485 8574d6d818d04f6c06d3f56b6faf05a1 325 Pfam PF01545 Cation efflux family 22 215 7.3E-52 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 RK98_RS09485 8574d6d818d04f6c06d3f56b6faf05a1 325 SUPERFAMILY SSF160240 219 295 1.1E-10 T 28-03-2018 RK98_RS06010 062d5243483c44531beee4ed57671adc 542 Gene3D G3DSA:3.40.50.1390 2 126 6.0E-43 T 28-03-2018 RK98_RS06010 062d5243483c44531beee4ed57671adc 542 SMART SM00857 9 157 3.8E-59 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RK98_RS06010 062d5243483c44531beee4ed57671adc 542 Pfam PF04606 Ogr/Delta-like zinc finger 301 356 6.9E-18 T 28-03-2018 IPR007684 Zinc finger, Ogr/Delta-type RK98_RS06010 062d5243483c44531beee4ed57671adc 542 Gene3D G3DSA:3.30.65.10 274 348 4.9E-4 T 28-03-2018 RK98_RS06010 062d5243483c44531beee4ed57671adc 542 Pfam PF07508 Recombinase 180 280 2.1E-24 T 28-03-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 RK98_RS06010 062d5243483c44531beee4ed57671adc 542 ProSitePatterns PS00397 Site-specific recombinases active site. 12 20 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 RK98_RS06010 062d5243483c44531beee4ed57671adc 542 SUPERFAMILY SSF53041 8 157 1.44E-38 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RK98_RS06010 062d5243483c44531beee4ed57671adc 542 Pfam PF00239 Resolvase, N terminal domain 11 156 4.8E-40 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 RK98_RS06010 062d5243483c44531beee4ed57671adc 542 Gene3D G3DSA:1.20.5.40 127 155 1.8E-9 T 28-03-2018 RK98_RS12255 142b98386dbfd6433a3409c12232edae 44 Pfam PF05480 Staphylococcus haemolytic protein 1 43 6.6E-24 T 28-03-2018 IPR008846 Staphylococcal hemolytic protein family GO:0009405 RK98_RS08355 fbbf29f2d8ee730f8fe6c640ec83a6eb 215 Pfam PF13437 HlyD family secretion protein 92 198 9.9E-13 T 28-03-2018 RK98_RS08355 fbbf29f2d8ee730f8fe6c640ec83a6eb 215 Gene3D G3DSA:2.40.50.100 42 101 3.6E-14 T 28-03-2018 RK98_RS08355 fbbf29f2d8ee730f8fe6c640ec83a6eb 215 SUPERFAMILY SSF51230 38 115 6.68E-7 T 28-03-2018 IPR011053 Single hybrid motif RK98_RS08355 fbbf29f2d8ee730f8fe6c640ec83a6eb 215 Pfam PF13533 Biotin-lipoyl like 44 75 1.6E-5 T 28-03-2018 RK98_RS08355 fbbf29f2d8ee730f8fe6c640ec83a6eb 215 Gene3D G3DSA:2.40.50.100 102 173 0.35 T 28-03-2018 RK98_RS04235 d6a207011bdcf340d81384f9f00b9e31 160 Pfam PF08281 Sigma-70, region 4 100 143 1.8E-10 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS04235 d6a207011bdcf340d81384f9f00b9e31 160 Gene3D G3DSA:1.10.10.10 92 160 3.5E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04235 d6a207011bdcf340d81384f9f00b9e31 160 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 95 153 3.5E-12 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS04235 d6a207011bdcf340d81384f9f00b9e31 160 SUPERFAMILY SSF88659 98 157 7.48E-16 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 RK98_RS06800 34c001336b00f34a4c6b72f34308b242 666 PIRSF PIRSF018968 1 665 2.2E-45 T 28-03-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 RK98_RS06800 34c001336b00f34a4c6b72f34308b242 666 Pfam PF02687 FtsX-like permease family 85 178 4.9E-10 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RK98_RS04130 e7c1f6f64c5b340d768dcbeb3c60f1cd 104 Pfam PF06125 Bacterial protein of unknown function (DUF961) 4 102 8.6E-36 T 28-03-2018 IPR010365 Protein of unknown function DUF961 RK98_RS08305 8c986ac73c5effa1d05dc0a016e17654 224 Gene3D G3DSA:3.40.50.2300 1 117 1.4E-32 T 28-03-2018 RK98_RS08305 8c986ac73c5effa1d05dc0a016e17654 224 Gene3D G3DSA:1.10.10.10 118 224 5.3E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08305 8c986ac73c5effa1d05dc0a016e17654 224 SMART SM00862 145 220 1.8E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS08305 8c986ac73c5effa1d05dc0a016e17654 224 SUPERFAMILY SSF52172 2 176 2.25E-38 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS08305 8c986ac73c5effa1d05dc0a016e17654 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 4.9E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS08305 8c986ac73c5effa1d05dc0a016e17654 224 SMART SM00448 2 112 6.7E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS08305 8c986ac73c5effa1d05dc0a016e17654 224 Pfam PF00072 Response regulator receiver domain 5 112 2.5E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 SMART SM00839 183 412 1.7E-96 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 SUPERFAMILY SSF51735 181 413 7.22E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 340 351 8.0E-30 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 92 106 8.0E-30 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 214 234 8.0E-30 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 172 194 8.0E-30 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 36 162 4.9E-56 T 28-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 Gene3D G3DSA:3.40.50.720 181 414 1.3E-76 T 28-03-2018 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 181 412 1.0E-77 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 SUPERFAMILY SSF53223 5 183 9.6E-67 T 28-03-2018 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 Gene3D G3DSA:3.40.50.10860 33 167 7.2E-52 T 28-03-2018 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 100 113 - T 28-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 RK98_RS11085 7d77ef15a728a9da9ce5eeaa86722aa4 414 PIRSF PIRSF000185 2 414 1.9E-171 T 28-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 RK98_RS06585 baaa73ee501bb11606382bf14a103ad4 230 SUPERFAMILY SSF52540 43 222 5.22E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS06585 baaa73ee501bb11606382bf14a103ad4 230 Gene3D G3DSA:3.40.50.300 41 225 6.4E-34 T 28-03-2018 RK98_RS06585 baaa73ee501bb11606382bf14a103ad4 230 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 23 226 8.2E-78 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 RK98_RS06585 baaa73ee501bb11606382bf14a103ad4 230 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 44 217 1.1E-13 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain RK98_RS06545 594d5b4211c4b41e2bf0a8e7994103c5 680 Pfam PF04650 YSIRK type signal peptide 3 27 1.9E-11 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS06545 594d5b4211c4b41e2bf0a8e7994103c5 680 Gene3D G3DSA:3.40.50.1820 290 680 1.7E-98 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS06545 594d5b4211c4b41e2bf0a8e7994103c5 680 SUPERFAMILY SSF53474 299 671 2.26E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS06545 594d5b4211c4b41e2bf0a8e7994103c5 680 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 3 36 1.3E-14 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS08110 8a76dfa6dd415d7db412a8d095b77a2c 325 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 87 120 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RK98_RS08110 8a76dfa6dd415d7db412a8d095b77a2c 325 SUPERFAMILY SSF53790 6 248 8.77E-62 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS08110 8a76dfa6dd415d7db412a8d095b77a2c 325 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 8 216 5.0E-45 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS08110 8a76dfa6dd415d7db412a8d095b77a2c 325 Gene3D G3DSA:3.40.1010.10 6 132 1.7E-33 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS08110 8a76dfa6dd415d7db412a8d095b77a2c 325 Gene3D G3DSA:3.30.950.10 133 253 1.8E-20 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 RK98_RS08110 8a76dfa6dd415d7db412a8d095b77a2c 325 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 7 242 8.1E-88 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 RK98_RS07740 e8aeadb3657ae9c8a95432c784c513ec 88 SUPERFAMILY SSF143011 4 88 3.53E-15 T 28-03-2018 IPR035095 Toxin RelE-like domain RK98_RS07740 e8aeadb3657ae9c8a95432c784c513ec 88 Gene3D G3DSA:3.30.2310.20 1 88 3.1E-18 T 28-03-2018 RK98_RS07740 e8aeadb3657ae9c8a95432c784c513ec 88 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 26 87 1.3E-9 T 28-03-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 RK98_RS07740 e8aeadb3657ae9c8a95432c784c513ec 88 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 9 87 7.5E-29 T 28-03-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 RK98_RS07805 ba9b31a30cf8420634c7a3db01bf6c38 313 SUPERFAMILY SSF53850 34 304 2.85E-64 T 28-03-2018 RK98_RS07805 ba9b31a30cf8420634c7a3db01bf6c38 313 Gene3D G3DSA:3.40.190.10 185 305 3.4E-23 T 28-03-2018 RK98_RS07805 ba9b31a30cf8420634c7a3db01bf6c38 313 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 301 1.2E-52 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 RK98_RS07805 ba9b31a30cf8420634c7a3db01bf6c38 313 Gene3D G3DSA:3.40.190.10 21 184 3.8E-28 T 28-03-2018 RK98_RS02810 d02ce72cc93370803d1de1b5660a423e 367 Gene3D G3DSA:3.40.50.2000 199 336 5.5E-4 T 28-03-2018 RK98_RS02810 d02ce72cc93370803d1de1b5660a423e 367 SUPERFAMILY SSF53756 40 299 2.75E-15 T 28-03-2018 RK98_RS02810 d02ce72cc93370803d1de1b5660a423e 367 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 25 333 2.6E-43 T 28-03-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 RK98_RS06490 dffe01f4a754f93f94ede4ec310ed52c 374 SUPERFAMILY SSF88713 83 140 3.61E-16 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RK98_RS06490 dffe01f4a754f93f94ede4ec310ed52c 374 SUPERFAMILY SSF88713 176 312 3.61E-16 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 RK98_RS06490 dffe01f4a754f93f94ede4ec310ed52c 374 Pfam PF01522 Polysaccharide deacetylase 227 298 1.9E-7 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 RK98_RS06490 dffe01f4a754f93f94ede4ec310ed52c 374 Gene3D G3DSA:3.10.120.10 18 62 0.0051 T 28-03-2018 IPR001199 Cytochrome b5-like heme/steroid binding domain RK98_RS06490 dffe01f4a754f93f94ede4ec310ed52c 374 Gene3D G3DSA:3.20.20.370 87 370 3.6E-23 T 28-03-2018 RK98_RS00280 6805ea4d04bddd6fbc2546c9bdfed77d 198 Gene3D G3DSA:3.30.1940.10 22 87 1.5E-22 T 28-03-2018 IPR027855 Domain of unknown function DUF4479 RK98_RS00280 6805ea4d04bddd6fbc2546c9bdfed77d 198 Pfam PF14794 Domain of unknown function (DUF4479) 22 88 1.3E-21 T 28-03-2018 IPR027855 Domain of unknown function DUF4479 RK98_RS00280 6805ea4d04bddd6fbc2546c9bdfed77d 198 Gene3D G3DSA:2.40.50.140 88 198 8.9E-37 T 28-03-2018 RK98_RS00280 6805ea4d04bddd6fbc2546c9bdfed77d 198 SUPERFAMILY SSF50249 89 197 8.32E-31 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS00280 6805ea4d04bddd6fbc2546c9bdfed77d 198 Pfam PF01588 Putative tRNA binding domain 93 194 6.4E-24 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 RK98_RS03610 707c9757f9e972b0f6c54f492cee5f26 217 Pfam PF01386 Ribosomal L25p family 8 91 2.9E-22 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RK98_RS03610 707c9757f9e972b0f6c54f492cee5f26 217 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 101 181 2.2E-24 T 28-03-2018 IPR020057 Ribosomal protein L25, beta domain RK98_RS03610 707c9757f9e972b0f6c54f492cee5f26 217 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 12 179 3.3E-50 T 28-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RK98_RS03610 707c9757f9e972b0f6c54f492cee5f26 217 Gene3D G3DSA:2.40.240.10 11 94 7.8E-26 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RK98_RS03610 707c9757f9e972b0f6c54f492cee5f26 217 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 2 182 26.296 T 28-03-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 RK98_RS03610 707c9757f9e972b0f6c54f492cee5f26 217 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 13 94 2.0E-38 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 RK98_RS03610 707c9757f9e972b0f6c54f492cee5f26 217 Gene3D G3DSA:2.170.120.20 98 186 8.8E-26 T 28-03-2018 IPR020057 Ribosomal protein L25, beta domain RK98_RS03610 707c9757f9e972b0f6c54f492cee5f26 217 SUPERFAMILY SSF50715 3 188 1.17E-53 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 RK98_RS14885 53ca2ec4dd77e6082f01ee7a90709bb3 357 Pfam PF05145 Transition state regulatory protein AbrB 31 346 2.5E-76 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 RK98_RS14885 53ca2ec4dd77e6082f01ee7a90709bb3 357 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 192 346 1.5E-34 T 28-03-2018 IPR017516 AbrB duplication RK98_RS14885 53ca2ec4dd77e6082f01ee7a90709bb3 357 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 10 165 9.3E-38 T 28-03-2018 IPR017516 AbrB duplication RK98_RS14885 53ca2ec4dd77e6082f01ee7a90709bb3 357 PIRSF PIRSF038991 1 356 4.3E-99 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 RK98_RS06640 e7271bd1a091842da0714f0da3176aec 517 TIGRFAM TIGR03713 acc_sec_asp1: accessory Sec system protein Asp1 1 510 4.1E-220 T 28-03-2018 IPR022372 Accessory secretory system protein Asp1 GO:0015031 RK98_RS06640 e7271bd1a091842da0714f0da3176aec 517 Pfam PF16993 Accessory Sec system protein Asp1 1 508 1.9E-106 T 28-03-2018 IPR022372 Accessory secretory system protein Asp1 GO:0015031 RK98_RS13565 9132f6e568b72a2b41607fce4b479704 219 SUPERFAMILY SSF52172 3 118 4.13E-41 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS13565 9132f6e568b72a2b41607fce4b479704 219 SUPERFAMILY SSF46894 119 218 7.09E-32 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 RK98_RS13565 9132f6e568b72a2b41607fce4b479704 219 Pfam PF00072 Response regulator receiver domain 4 113 3.3E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS13565 9132f6e568b72a2b41607fce4b479704 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 217 1.0E-27 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS13565 9132f6e568b72a2b41607fce4b479704 219 SMART SM00448 2 112 1.1E-43 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS13565 9132f6e568b72a2b41607fce4b479704 219 Gene3D G3DSA:3.40.50.2300 1 117 6.1E-36 T 28-03-2018 RK98_RS13565 9132f6e568b72a2b41607fce4b479704 219 Gene3D G3DSA:1.10.10.10 118 219 1.4E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13565 9132f6e568b72a2b41607fce4b479704 219 SMART SM00862 143 218 1.1E-27 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS12815 e5a93d8aac324bbfb9cb9f0c67c271ab 428 SUPERFAMILY SSF63411 247 417 3.32E-17 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RK98_RS12815 e5a93d8aac324bbfb9cb9f0c67c271ab 428 Pfam PF00675 Insulinase (Peptidase family M16) 64 166 4.1E-14 T 28-03-2018 IPR011765 Peptidase M16, N-terminal RK98_RS12815 e5a93d8aac324bbfb9cb9f0c67c271ab 428 SUPERFAMILY SSF63411 6 230 6.11E-41 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 RK98_RS12815 e5a93d8aac324bbfb9cb9f0c67c271ab 428 Pfam PF05193 Peptidase M16 inactive domain 181 362 7.2E-25 T 28-03-2018 IPR007863 Peptidase M16, C-terminal RK98_RS12815 e5a93d8aac324bbfb9cb9f0c67c271ab 428 Gene3D G3DSA:3.30.830.10 242 420 2.4E-17 T 28-03-2018 RK98_RS12815 e5a93d8aac324bbfb9cb9f0c67c271ab 428 Gene3D G3DSA:3.30.830.10 2 226 2.7E-45 T 28-03-2018 RK98_RS05965 742a126a5f7c1faff5d1d7e9f25e286c 26 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 4 26 4.6E-7 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RK98_RS05965 742a126a5f7c1faff5d1d7e9f25e286c 26 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 4 26 4.0E-7 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 RK98_RS05330 6c46b049f0339e2f2cad92310665dea7 291 Pfam PF01380 SIS domain 127 255 4.3E-14 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 RK98_RS05330 6c46b049f0339e2f2cad92310665dea7 291 Gene3D G3DSA:1.10.10.10 1 76 2.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS05330 6c46b049f0339e2f2cad92310665dea7 291 Gene3D G3DSA:3.40.50.10490 77 270 3.1E-27 T 28-03-2018 RK98_RS05330 6c46b049f0339e2f2cad92310665dea7 291 SUPERFAMILY SSF46689 1 78 2.15E-22 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS05330 6c46b049f0339e2f2cad92310665dea7 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 3 75 4.4E-22 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 RK98_RS05330 6c46b049f0339e2f2cad92310665dea7 291 SUPERFAMILY SSF53697 98 284 1.22E-28 T 28-03-2018 RK98_RS13225 4d7b440050a1ca3e97c28b96ad8013db 98 PIRSF PIRSF034852 1 98 1.3E-33 T 28-03-2018 IPR008326 Uncharacterised conserved protein UCP034852 RK98_RS13225 4d7b440050a1ca3e97c28b96ad8013db 98 Gene3D G3DSA:2.60.300.12 1 97 2.7E-9 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 RK98_RS13225 4d7b440050a1ca3e97c28b96ad8013db 98 SUPERFAMILY SSF89360 1 80 4.12E-9 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 RK98_RS02285 9301747715f649b16cd1e5190217efc7 342 SUPERFAMILY SSF53807 62 333 3.89E-59 T 28-03-2018 RK98_RS02285 9301747715f649b16cd1e5190217efc7 342 Gene3D G3DSA:3.40.50.1980 25 179 5.5E-26 T 28-03-2018 RK98_RS02285 9301747715f649b16cd1e5190217efc7 342 Pfam PF01497 Periplasmic binding protein 74 318 1.0E-30 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 RK98_RS02285 9301747715f649b16cd1e5190217efc7 342 Gene3D G3DSA:3.40.50.1980 180 339 4.5E-34 T 28-03-2018 RK98_RS01990 d24de4b33b17f5fd2b89c20c7e66f86e 105 Pfam PF07342 Protein of unknown function (DUF1474) 1 98 8.0E-21 T 28-03-2018 IPR009942 Protein of unknown function DUF1474 RK98_RS14770 af53a7569ff404b41270c87ca2738d42 94 Pfam PF01016 Ribosomal L27 protein 10 89 2.0E-34 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14770 af53a7569ff404b41270c87ca2738d42 94 PRINTS PR00063 Ribosomal protein L27 signature 62 86 3.1E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14770 af53a7569ff404b41270c87ca2738d42 94 PRINTS PR00063 Ribosomal protein L27 signature 12 36 3.1E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14770 af53a7569ff404b41270c87ca2738d42 94 PRINTS PR00063 Ribosomal protein L27 signature 37 61 3.1E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14770 af53a7569ff404b41270c87ca2738d42 94 Gene3D G3DSA:2.40.50.100 28 92 5.8E-29 T 28-03-2018 RK98_RS14770 af53a7569ff404b41270c87ca2738d42 94 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 1.0E-17 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14770 af53a7569ff404b41270c87ca2738d42 94 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 9.3E-40 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14770 af53a7569ff404b41270c87ca2738d42 94 SUPERFAMILY SSF110324 10 91 3.14E-32 T 28-03-2018 RK98_RS14770 af53a7569ff404b41270c87ca2738d42 94 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 27.031 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS14770 af53a7569ff404b41270c87ca2738d42 94 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 28-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS13985 e8f132928256f0fd29219f8c863e0c07 241 SUPERFAMILY SSF52172 5 189 7.18E-43 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS13985 e8f132928256f0fd29219f8c863e0c07 241 Gene3D G3DSA:3.40.50.2300 2 128 5.5E-40 T 28-03-2018 RK98_RS13985 e8f132928256f0fd29219f8c863e0c07 241 SMART SM00448 3 113 5.5E-47 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS13985 e8f132928256f0fd29219f8c863e0c07 241 SMART SM00862 154 231 1.6E-26 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS13985 e8f132928256f0fd29219f8c863e0c07 241 Pfam PF00072 Response regulator receiver domain 5 113 3.1E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS13985 e8f132928256f0fd29219f8c863e0c07 241 Gene3D G3DSA:1.10.10.10 129 238 1.3E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS13985 e8f132928256f0fd29219f8c863e0c07 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 5.1E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS13085 f6f8ebeaaa4df67226969b40cafbdc4c 426 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 8.7E-18 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 RK98_RS13085 f6f8ebeaaa4df67226969b40cafbdc4c 426 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RK98_RS13085 f6f8ebeaaa4df67226969b40cafbdc4c 426 Gene3D G3DSA:3.40.50.720 1 157 9.5E-31 T 28-03-2018 RK98_RS13085 f6f8ebeaaa4df67226969b40cafbdc4c 426 Pfam PF00742 Homoserine dehydrogenase 137 315 1.5E-59 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RK98_RS13085 f6f8ebeaaa4df67226969b40cafbdc4c 426 Gene3D G3DSA:3.30.360.10 158 298 2.7E-47 T 28-03-2018 RK98_RS13085 f6f8ebeaaa4df67226969b40cafbdc4c 426 SUPERFAMILY SSF51735 1 158 7.62E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS13085 f6f8ebeaaa4df67226969b40cafbdc4c 426 SUPERFAMILY SSF55347 137 302 7.85E-49 T 28-03-2018 RK98_RS13085 f6f8ebeaaa4df67226969b40cafbdc4c 426 PIRSF PIRSF000098 1 400 4.7E-131 T 28-03-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 RK98_RS08600 81ff64fe72f19429e5ec16583d73d0ea 212 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 69 195 1.5E-17 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RK98_RS08600 81ff64fe72f19429e5ec16583d73d0ea 212 Gene3D G3DSA:1.10.530.10 52 201 1.8E-28 T 28-03-2018 RK98_RS08600 81ff64fe72f19429e5ec16583d73d0ea 212 SMART SM00047 56 200 4.4E-43 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RK98_RS06580 7992538301c0abc85ac7f8931bbc3ead 220 Pfam PF02706 Chain length determinant protein 3 92 4.2E-23 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 RK98_RS06580 7992538301c0abc85ac7f8931bbc3ead 220 Gene3D G3DSA:3.30.1890.10 37 168 1.7E-8 T 28-03-2018 RK98_RS14120 543f59376260870ec60073c62728e44c 330 SUPERFAMILY SSF52518 3 326 5.06E-93 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold RK98_RS14120 543f59376260870ec60073c62728e44c 330 Pfam PF00676 Dehydrogenase E1 component 19 316 2.7E-84 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 RK98_RS14120 543f59376260870ec60073c62728e44c 330 Gene3D G3DSA:3.40.50.970 2 330 2.8E-79 T 28-03-2018 RK98_RS05105 2762b00569596f964b2ce9f8445fcf57 118 Pfam PF04343 Protein of unknown function, DUF488 5 116 7.4E-32 T 28-03-2018 IPR007438 Protein of unknown function DUF488 RK98_RS11545 6a7ada12c8b7c8dcf0caec305a6137d7 393 Pfam PF14731 Staphopain proregion 41 210 2.1E-80 T 28-03-2018 IPR028076 Staphopain proregion RK98_RS11545 6a7ada12c8b7c8dcf0caec305a6137d7 393 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 338 348 - T 28-03-2018 IPR025660 Cysteine peptidase, histidine active site Reactome: R-HSA-2132295 RK98_RS11545 6a7ada12c8b7c8dcf0caec305a6137d7 393 Pfam PF05543 Staphopain peptidase C47 221 393 6.7E-95 T 28-03-2018 IPR008750 Staphopain peptidase C47 GO:0006508|GO:0008234 RK98_RS11545 6a7ada12c8b7c8dcf0caec305a6137d7 393 SUPERFAMILY SSF54403 41 211 5.27E-76 T 28-03-2018 RK98_RS11545 6a7ada12c8b7c8dcf0caec305a6137d7 393 SUPERFAMILY SSF54001 221 393 2.14E-90 T 28-03-2018 RK98_RS11545 6a7ada12c8b7c8dcf0caec305a6137d7 393 Gene3D G3DSA:3.90.70.10 211 393 1.9E-28 T 28-03-2018 RK98_RS11545 6a7ada12c8b7c8dcf0caec305a6137d7 393 Gene3D G3DSA:3.10.500.10 40 203 6.5E-57 T 28-03-2018 IPR028076 Staphopain proregion RK98_RS04360 fc9af38529baece8aa2ca2b46016994f 87 SUPERFAMILY SSF47413 4 71 5.63E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS04360 fc9af38529baece8aa2ca2b46016994f 87 Gene3D G3DSA:1.10.260.40 4 85 5.2E-8 T 28-03-2018 RK98_RS04255 4153f9e9596f974454dee1785cbc5e80 397 Gene3D G3DSA:1.10.150.130 60 171 1.1E-14 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS04255 4153f9e9596f974454dee1785cbc5e80 397 Pfam PF14657 Arm DNA-binding domain 13 50 2.2E-8 T 28-03-2018 IPR028259 AP2-like integrase, N-terminal domain RK98_RS04255 4153f9e9596f974454dee1785cbc5e80 397 Gene3D G3DSA:1.10.443.10 172 353 3.0E-34 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS04255 4153f9e9596f974454dee1785cbc5e80 397 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 70 121 6.8E-10 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 RK98_RS04255 4153f9e9596f974454dee1785cbc5e80 397 SUPERFAMILY SSF56349 70 360 2.24E-60 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 RK98_RS04255 4153f9e9596f974454dee1785cbc5e80 397 Pfam PF00589 Phage integrase family 172 351 7.0E-23 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 RK98_RS08500 b61d0b54174caa80df2cac0843cada46 437 Pfam PF03553 Na+/H+ antiporter family 25 211 2.0E-11 T 28-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 RK98_RS08500 b61d0b54174caa80df2cac0843cada46 437 Pfam PF03553 Na+/H+ antiporter family 239 422 8.5E-11 T 28-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 RK98_RS03820 05a1ea70a32d111b0114a12f9dd7585c 260 PIRSF PIRSF031503 1 260 1.3E-121 T 28-03-2018 IPR014564 Uncharacterised conserved protein UCP031503, transmembrane RK98_RS03820 05a1ea70a32d111b0114a12f9dd7585c 260 Pfam PF07907 YibE/F-like protein 5 244 7.3E-67 T 28-03-2018 IPR012507 YibE/F-like RK98_RS07510 22e18a09d41e6df8622b99c4c3091cf7 118 Gene3D G3DSA:1.10.10.10 14 118 1.4E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07510 22e18a09d41e6df8622b99c4c3091cf7 118 SUPERFAMILY SSF46785 1 114 4.14E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07510 22e18a09d41e6df8622b99c4c3091cf7 118 Pfam PF13463 Winged helix DNA-binding domain 52 96 1.4E-6 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS07510 22e18a09d41e6df8622b99c4c3091cf7 118 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 11 116 2.3E-34 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS07290 298bd8e95aab1b7aa4068e54b12ae684 118 Pfam PF00085 Thioredoxin 8 88 5.1E-8 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 RK98_RS07290 298bd8e95aab1b7aa4068e54b12ae684 118 SUPERFAMILY SSF52833 2 102 7.09E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS07290 298bd8e95aab1b7aa4068e54b12ae684 118 Gene3D G3DSA:3.40.30.10 1 118 6.0E-14 T 28-03-2018 RK98_RS03645 db604f33fd6dbf943d255343db14f685 274 SUPERFAMILY SSF46785 2 74 1.99E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03645 db604f33fd6dbf943d255343db14f685 274 Pfam PF09182 Bacterial purine repressor, N-terminal 4 73 5.4E-31 T 28-03-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 RK98_RS03645 db604f33fd6dbf943d255343db14f685 274 Gene3D G3DSA:3.40.50.2020 74 274 1.3E-29 T 28-03-2018 RK98_RS03645 db604f33fd6dbf943d255343db14f685 274 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 268 4.5E-109 T 28-03-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 RK98_RS03645 db604f33fd6dbf943d255343db14f685 274 SUPERFAMILY SSF53271 95 260 4.82E-34 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like RK98_RS03645 db604f33fd6dbf943d255343db14f685 274 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 10 73 3.0E-31 T 28-03-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 RK98_RS03645 db604f33fd6dbf943d255343db14f685 274 Pfam PF00156 Phosphoribosyl transferase domain 108 263 1.9E-21 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RK98_RS03645 db604f33fd6dbf943d255343db14f685 274 Gene3D G3DSA:1.10.10.10 1 73 9.6E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS12360 068ea42f55d2ccebb3226167bcfdbc55 265 SUPERFAMILY SSF54593 168 242 7.47E-7 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS12360 068ea42f55d2ccebb3226167bcfdbc55 265 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 122 7.0E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK98_RS12360 068ea42f55d2ccebb3226167bcfdbc55 265 SUPERFAMILY SSF54593 10 164 1.1E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS12360 068ea42f55d2ccebb3226167bcfdbc55 265 Gene3D G3DSA:3.10.180.10 64 225 4.7E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS12360 068ea42f55d2ccebb3226167bcfdbc55 265 Gene3D G3DSA:3.10.180.10 3 63 0.0019 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS04940 4b48e017b7c45a3a5cf0e1b2d4dda456 478 Pfam PF00232 Glycosyl hydrolase family 1 3 475 2.3E-133 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS04940 4b48e017b7c45a3a5cf0e1b2d4dda456 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 8.3E-19 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS04940 4b48e017b7c45a3a5cf0e1b2d4dda456 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 8.3E-19 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS04940 4b48e017b7c45a3a5cf0e1b2d4dda456 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 8.3E-19 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS04940 4b48e017b7c45a3a5cf0e1b2d4dda456 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 8.3E-19 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS04940 4b48e017b7c45a3a5cf0e1b2d4dda456 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 8.3E-19 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 RK98_RS04940 4b48e017b7c45a3a5cf0e1b2d4dda456 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site RK98_RS04940 4b48e017b7c45a3a5cf0e1b2d4dda456 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site RK98_RS04940 4b48e017b7c45a3a5cf0e1b2d4dda456 478 SUPERFAMILY SSF51445 2 475 4.17E-161 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily RK98_RS04940 4b48e017b7c45a3a5cf0e1b2d4dda456 478 Gene3D G3DSA:3.20.20.80 1 478 4.8E-151 T 28-03-2018 RK98_RS07580 ba1b587c4f1cd36cab5eec27e680277b 441 SUPERFAMILY SSF53474 14 224 1.21E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS07580 ba1b587c4f1cd36cab5eec27e680277b 441 Gene3D G3DSA:3.40.50.1820 7 298 1.6E-15 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 SUPERFAMILY SSF47928 2 103 4.97E-23 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 4 174 7.1E-35 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 Gene3D G3DSA:1.10.520.20 1 105 2.3E-22 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 28-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.1E-21 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 PRINTS PR00125 ATP synthase delta subunit signature 73 84 1.1E-21 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 PRINTS PR00125 ATP synthase delta subunit signature 84 98 1.1E-21 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 PRINTS PR00125 ATP synthase delta subunit signature 4 23 1.1E-21 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.1E-21 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 4 174 4.0E-43 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS09695 565cd4f2cd1bb041c36891c14bdc2a8f 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 177 16.636 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 RK98_RS04290 aaf48521ca04a4cc8964db0d68f31730 318 Gene3D G3DSA:1.10.1660.10 1 145 5.6E-5 T 28-03-2018 RK98_RS06155 7345c1a371567268bd08c1b3dd28343a 134 PRINTS PR00311 Bleomycin resistance protein signature 5 22 2.7E-16 T 28-03-2018 IPR000335 Bleomycin resistance protein GO:0008144|GO:0046677 RK98_RS06155 7345c1a371567268bd08c1b3dd28343a 134 PRINTS PR00311 Bleomycin resistance protein signature 24 35 2.7E-16 T 28-03-2018 IPR000335 Bleomycin resistance protein GO:0008144|GO:0046677 RK98_RS06155 7345c1a371567268bd08c1b3dd28343a 134 PRINTS PR00311 Bleomycin resistance protein signature 36 47 2.7E-16 T 28-03-2018 IPR000335 Bleomycin resistance protein GO:0008144|GO:0046677 RK98_RS06155 7345c1a371567268bd08c1b3dd28343a 134 Gene3D G3DSA:3.10.180.10 3 134 1.6E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS06155 7345c1a371567268bd08c1b3dd28343a 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 128 2.4E-9 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK98_RS06155 7345c1a371567268bd08c1b3dd28343a 134 SUPERFAMILY SSF54593 7 131 1.61E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS00650 7007cb6fc19fb84fdbe7daff431aef21 263 Pfam PF08862 Domain of unknown function DUF1829 167 253 6.0E-15 T 28-03-2018 IPR014961 Domain of unknown function DUF1829 RK98_RS00650 7007cb6fc19fb84fdbe7daff431aef21 263 Pfam PF08861 Domain of unknown function DUF1828 36 126 9.0E-18 T 28-03-2018 IPR014960 Domain of unknown function DUF1828 RK98_RS04375 b0f23612e6808641475e2485cce96fd1 203 Gene3D G3DSA:3.10.20.120 88 198 1.8E-20 T 28-03-2018 RK98_RS04375 b0f23612e6808641475e2485cce96fd1 203 SUPERFAMILY SSF54334 98 193 1.22E-19 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS04375 b0f23612e6808641475e2485cce96fd1 203 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 112 189 1.5E-4 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS09315 2677d99e7f7b8227c34c8708576fda14 171 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 147 1.1E-32 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase RK98_RS09315 2677d99e7f7b8227c34c8708576fda14 171 PIRSF PIRSF030780 8 171 1.3E-23 T 28-03-2018 IPR016956 Inner membrane protein YdjM RK98_RS01870 1d5cf085dc1b059d6c2e711ea291e202 154 Gene3D G3DSA:3.40.190.10 1 134 9.9E-4 T 28-03-2018 RK98_RS11905 dfb877fcead4c261527b503e1e65620f 303 Pfam PF01040 UbiA prenyltransferase family 32 284 5.7E-56 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 RK98_RS11905 dfb877fcead4c261527b503e1e65620f 303 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 299 16.953 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 RK98_RS11905 dfb877fcead4c261527b503e1e65620f 303 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 17 297 1.3E-95 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 RK98_RS14250 3fd984914a70d9e48276754e2e02b555 356 Pfam PF00482 Type II secretion system (T2SS), protein F 27 146 4.4E-7 T 28-03-2018 IPR018076 Type II secretion system F domain RK98_RS14250 3fd984914a70d9e48276754e2e02b555 356 Pfam PF00482 Type II secretion system (T2SS), protein F 227 347 1.5E-13 T 28-03-2018 IPR018076 Type II secretion system F domain RK98_RS01470 7dca659f603e194fb64ea6ccdeacf487 185 Pfam PF08006 Protein of unknown function (DUF1700) 1 181 2.8E-49 T 28-03-2018 IPR012963 Protein of unknown function DUF1700 RK98_RS10460 0b6ecf412464f7fbb503f9821eae1bd3 283 Pfam PF04018 Domain of unknown function (DUF368) 15 251 2.7E-49 T 28-03-2018 IPR007163 Protein of unknown function DUF368 RK98_RS09730 c0977d7381a09998f46a6c5328f3a98f 421 Gene3D G3DSA:3.65.10.10 224 421 1.7E-48 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RK98_RS09730 c0977d7381a09998f46a6c5328f3a98f 421 SUPERFAMILY SSF55205 1 420 4.09E-135 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 RK98_RS09730 c0977d7381a09998f46a6c5328f3a98f 421 Gene3D G3DSA:3.65.10.10 21 223 2.2E-46 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RK98_RS09730 c0977d7381a09998f46a6c5328f3a98f 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 4.5E-106 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 RK98_RS09730 c0977d7381a09998f46a6c5328f3a98f 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 44.571 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS09730 c0977d7381a09998f46a6c5328f3a98f 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 1.0E-174 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 RK98_RS04840 2fafa33a7a7957d6efbdc6af82171706 152 TIGRFAM TIGR03927 T7SS_EssA_Firm: type VII secretion protein EssA 2 144 5.2E-34 T 28-03-2018 IPR018920 ESAT-6 secretion machinery protein EssA/YueC RK98_RS04840 2fafa33a7a7957d6efbdc6af82171706 152 Pfam PF10661 WXG100 protein secretion system (Wss), protein EssA 28 118 1.2E-6 T 28-03-2018 IPR034026 ESAT-6 secretion machinery protein EssA RK98_RS10780 48652819dd68278de6ee5af7872d13d6 633 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 426 618 4.5E-14 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain RK98_RS10780 48652819dd68278de6ee5af7872d13d6 633 Gene3D G3DSA:3.40.50.1110 406 633 7.8E-24 T 28-03-2018 RK98_RS10780 48652819dd68278de6ee5af7872d13d6 633 SUPERFAMILY SSF52266 417 626 6.0E-40 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain RK98_RS10780 48652819dd68278de6ee5af7872d13d6 633 Pfam PF06605 Prophage endopeptidase tail 29 344 7.8E-22 T 28-03-2018 IPR010572 Prophage tail endopeptidase RK98_RS02815 d0adc043a817a795b81fa33a3ac16ba3 270 Pfam PF01061 ABC-2 type transporter 17 227 2.2E-15 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 RK98_RS13945 080c1cb6e8975d36b654be8567a30f68 181 Pfam PF12822 ECF transporter, substrate-specific component 5 171 2.2E-27 T 28-03-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 RK98_RS13945 080c1cb6e8975d36b654be8567a30f68 181 PIRSF PIRSF037778 1 181 1.3E-49 T 28-03-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 RK98_RS10075 180f660ed5ff748c81703c75bf5721ce 74 Pfam PF01206 Sulfurtransferase TusA 3 73 1.4E-17 T 28-03-2018 IPR001455 TusA-like domain RK98_RS10075 180f660ed5ff748c81703c75bf5721ce 74 Gene3D G3DSA:3.30.110.40 2 74 1.7E-16 T 28-03-2018 IPR001455 TusA-like domain RK98_RS10075 180f660ed5ff748c81703c75bf5721ce 74 SUPERFAMILY SSF64307 2 73 3.66E-20 T 28-03-2018 IPR001455 TusA-like domain RK98_RS12345 11db4d7c07cec290f1fdf2da194a4973 268 Gene3D G3DSA:3.10.290.10 188 242 9.1E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS12345 11db4d7c07cec290f1fdf2da194a4973 268 Pfam PF01479 S4 domain 192 237 7.3E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS12345 11db4d7c07cec290f1fdf2da194a4973 268 SUPERFAMILY SSF55174 188 261 9.42E-34 T 28-03-2018 RK98_RS12345 11db4d7c07cec290f1fdf2da194a4973 268 SUPERFAMILY SSF55174 48 137 9.42E-34 T 28-03-2018 RK98_RS12345 11db4d7c07cec290f1fdf2da194a4973 268 SMART SM00363 191 248 1.4E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 RK98_RS14545 bb0cd2e56428e785b8dd657eab384963 406 Pfam PF02661 Fic/DOC family 151 254 3.5E-14 T 28-03-2018 IPR003812 Fido domain RK98_RS14545 bb0cd2e56428e785b8dd657eab384963 406 SUPERFAMILY SSF140931 139 315 1.57E-23 T 28-03-2018 IPR003812 Fido domain RK98_RS14545 bb0cd2e56428e785b8dd657eab384963 406 Gene3D G3DSA:1.10.3290.10 66 326 1.0E-33 T 28-03-2018 IPR003812 Fido domain RK98_RS12430 a8715a5b30b7e5fa9ed72fb208b17ded 133 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 129 4.8E-40 T 28-03-2018 IPR028973 PhnB-like RK98_RS12430 a8715a5b30b7e5fa9ed72fb208b17ded 133 SUPERFAMILY SSF54593 3 131 1.01E-33 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS12430 a8715a5b30b7e5fa9ed72fb208b17ded 133 PIRSF PIRSF500687 1 133 9.9E-64 T 28-03-2018 IPR027259 Predicted 3-demethylubiquinone-9 3-methyltransferase, bacterial RK98_RS12430 a8715a5b30b7e5fa9ed72fb208b17ded 133 PIRSF PIRSF021700 1 133 4.0E-42 T 28-03-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase RK98_RS12430 a8715a5b30b7e5fa9ed72fb208b17ded 133 Gene3D G3DSA:3.10.180.10 1 133 2.2E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS05175 3b68bd05d50ebdf7a9e7020cd40587e8 322 Gene3D G3DSA:3.40.190.10 15 82 0.0028 T 28-03-2018 RK98_RS05175 3b68bd05d50ebdf7a9e7020cd40587e8 322 SUPERFAMILY SSF53850 27 314 1.09E-39 T 28-03-2018 RK98_RS05175 3b68bd05d50ebdf7a9e7020cd40587e8 322 Pfam PF13531 Bacterial extracellular solute-binding protein 34 276 1.3E-20 T 28-03-2018 RK98_RS05175 3b68bd05d50ebdf7a9e7020cd40587e8 322 Gene3D G3DSA:3.40.190.10 127 273 8.4E-18 T 28-03-2018 RK98_RS01580 7940978b7fe4ab77ad25cc609be92c7b 163 Pfam PF02821 Staphylokinase/Streptokinase family 46 146 3.4E-32 T 28-03-2018 IPR004093 Staphylokinase/Streptokinase GO:0005576|GO:0009405|GO:0031639 RK98_RS01580 7940978b7fe4ab77ad25cc609be92c7b 163 Gene3D G3DSA:3.10.20.130 44 162 7.8E-45 T 28-03-2018 RK98_RS01580 7940978b7fe4ab77ad25cc609be92c7b 163 SUPERFAMILY SSF54328 29 163 4.97E-57 T 28-03-2018 IPR004093 Staphylokinase/Streptokinase GO:0005576|GO:0009405|GO:0031639 RK98_RS08315 a10320e6d6679dbe874c014847a929de 221 Gene3D G3DSA:3.40.50.300 1 221 6.3E-61 T 28-03-2018 RK98_RS08315 a10320e6d6679dbe874c014847a929de 221 Pfam PF00005 ABC transporter 22 170 3.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS08315 a10320e6d6679dbe874c014847a929de 221 SMART SM00382 31 218 7.9E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS08315 a10320e6d6679dbe874c014847a929de 221 SUPERFAMILY SSF52540 3 220 1.6E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14005 a4654830a8d38fabee531fb1ce0a89e4 168 Gene3D G3DSA:1.10.3450.10 2 132 4.8E-22 T 28-03-2018 IPR023203 TTHA0068-like domain RK98_RS14005 a4654830a8d38fabee531fb1ce0a89e4 168 SUPERFAMILY SSF140663 3 117 4.84E-23 T 28-03-2018 IPR023203 TTHA0068-like domain RK98_RS14005 a4654830a8d38fabee531fb1ce0a89e4 168 Pfam PF03745 Domain of unknown function (DUF309) 6 64 1.4E-17 T 28-03-2018 IPR005500 Protein of unknown function DUF309 RK98_RS00495 1f1b615bb239be322c78d59bd7d10dae 302 Pfam PF08378 Nuclease-related domain 115 176 1.7E-5 T 28-03-2018 IPR011528 Nuclease-related domain, NERD RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 38 55 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 SUPERFAMILY SSF51430 7 257 4.19E-86 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 PRINTS PR00069 Aldo-keto reductase signature 90 108 3.5E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 PRINTS PR00069 Aldo-keto reductase signature 34 58 3.5E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 PRINTS PR00069 Aldo-keto reductase signature 119 136 3.5E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 PRINTS PR00069 Aldo-keto reductase signature 153 182 3.5E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 PRINTS PR00069 Aldo-keto reductase signature 192 216 3.5E-45 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 119 136 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 225 240 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 Pfam PF00248 Aldo/keto reductase family 21 256 5.6E-52 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 Gene3D G3DSA:3.20.20.100 2 274 1.6E-89 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 PIRSF PIRSF000097 109 275 3.9E-42 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS09170 5763e80d0bcfb8b61c0ef670c999e16a 282 PIRSF PIRSF000097 1 113 4.0E-37 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS09560 4c8696ff2154cb5ad12be3b68c23f85e 397 SUPERFAMILY SSF56059 126 325 7.27E-22 T 28-03-2018 RK98_RS09560 4c8696ff2154cb5ad12be3b68c23f85e 397 Gene3D G3DSA:3.30.470.20 69 324 1.7E-18 T 28-03-2018 RK98_RS05240 de17e70bf42794a9d7f5dcbce80364e0 208 Pfam PF02525 Flavodoxin-like fold 3 202 1.1E-43 T 28-03-2018 IPR003680 Flavodoxin-like fold RK98_RS05240 de17e70bf42794a9d7f5dcbce80364e0 208 SUPERFAMILY SSF52218 1 208 1.02E-49 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS05240 de17e70bf42794a9d7f5dcbce80364e0 208 Gene3D G3DSA:3.40.50.360 2 208 5.1E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain RK98_RS05240 de17e70bf42794a9d7f5dcbce80364e0 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 208 28.699 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 RK98_RS06015 c8b52568651badaffcbebd3379ee0975 116 Pfam PF06106 S. aureus uracil DNA glycosylase inhibitor 2 112 3.9E-76 T 28-03-2018 IPR009295 Uracil DNA glycosylase inhibitor RK98_RS01105 4c9332a11c3b3966a7781897da80a832 364 Pfam PF06081 Aromatic acid exporter family member 1 2 144 1.1E-26 T 28-03-2018 IPR010343 Aromatic acid exporter family member 1 RK98_RS07300 45d27f9f6632c8f8efb983feee2d3713 311 SUPERFAMILY SSF103481 51 157 5.49E-8 T 28-03-2018 RK98_RS07300 45d27f9f6632c8f8efb983feee2d3713 311 SUPERFAMILY SSF103481 217 304 4.71E-7 T 28-03-2018 RK98_RS07300 45d27f9f6632c8f8efb983feee2d3713 311 Pfam PF00892 EamA-like transporter family 169 301 7.7E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 RK98_RS07300 45d27f9f6632c8f8efb983feee2d3713 311 Pfam PF00892 EamA-like transporter family 14 155 1.5E-19 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 RK98_RS09555 e3e1acc7fa56642bf25667330d3a16c0 394 SUPERFAMILY SSF53187 284 376 1.6E-61 T 28-03-2018 RK98_RS09555 e3e1acc7fa56642bf25667330d3a16c0 394 SUPERFAMILY SSF53187 5 184 1.6E-61 T 28-03-2018 RK98_RS09555 e3e1acc7fa56642bf25667330d3a16c0 394 PIRSF PIRSF037226 1 394 2.4E-163 T 28-03-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted RK98_RS09555 e3e1acc7fa56642bf25667330d3a16c0 394 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 337 1.0E-59 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 RK98_RS09555 e3e1acc7fa56642bf25667330d3a16c0 394 Gene3D G3DSA:3.40.630.10 1 394 4.3E-58 T 28-03-2018 RK98_RS09555 e3e1acc7fa56642bf25667330d3a16c0 394 SUPERFAMILY SSF55031 171 276 1.22E-19 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS09555 e3e1acc7fa56642bf25667330d3a16c0 394 Pfam PF07687 Peptidase dimerisation domain 174 265 2.5E-7 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain RK98_RS09555 e3e1acc7fa56642bf25667330d3a16c0 394 Pfam PF01546 Peptidase family M20/M25/M40 85 366 1.6E-6 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 RK98_RS07965 3dd4fe179a6e3f8a34500e051a1c926e 315 Pfam PF07968 Leukocidin/Hemolysin toxin family 60 306 2.3E-86 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS07965 3dd4fe179a6e3f8a34500e051a1c926e 315 TIGRFAM TIGR01002 hlyII: beta-channel forming cytolysin 6 311 2.2E-84 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07965 3dd4fe179a6e3f8a34500e051a1c926e 315 PRINTS PR01468 Staphylococcal bi-component toxin signature 64 83 3.2E-32 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07965 3dd4fe179a6e3f8a34500e051a1c926e 315 PRINTS PR01468 Staphylococcal bi-component toxin signature 125 146 3.2E-32 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07965 3dd4fe179a6e3f8a34500e051a1c926e 315 PRINTS PR01468 Staphylococcal bi-component toxin signature 235 252 3.2E-32 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS07965 3dd4fe179a6e3f8a34500e051a1c926e 315 SUPERFAMILY SSF56959 39 314 4.91E-105 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS07965 3dd4fe179a6e3f8a34500e051a1c926e 315 Gene3D G3DSA:2.70.240.10 29 310 7.1E-99 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS00370 7362e37e4d8c4cfcb4c31991456e0e83 317 SMART SM00729 30 257 4.0E-42 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RK98_RS00370 7362e37e4d8c4cfcb4c31991456e0e83 317 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 13 312 9.9E-131 T 28-03-2018 IPR005911 Protein YhcC-like GO:0051536 RK98_RS00370 7362e37e4d8c4cfcb4c31991456e0e83 317 Pfam PF16199 Radical_SAM C-terminal domain 218 301 3.0E-23 T 28-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 RK98_RS00370 7362e37e4d8c4cfcb4c31991456e0e83 317 Pfam PF04055 Radical SAM superfamily 50 212 8.2E-14 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS00370 7362e37e4d8c4cfcb4c31991456e0e83 317 Gene3D G3DSA:3.20.20.70 7 269 2.1E-30 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS00370 7362e37e4d8c4cfcb4c31991456e0e83 317 SUPERFAMILY SSF102114 6 312 6.02E-54 T 28-03-2018 RK98_RS13850 7d3e0ed35acb225c216501f5f3f813b5 314 Gene3D G3DSA:1.10.600.10 1 314 2.8E-86 T 28-03-2018 IPR008949 Isoprenoid synthase domain RK98_RS13850 7d3e0ed35acb225c216501f5f3f813b5 314 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 196 208 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site RK98_RS13850 7d3e0ed35acb225c216501f5f3f813b5 314 SUPERFAMILY SSF48576 3 313 1.48E-78 T 28-03-2018 IPR008949 Isoprenoid synthase domain RK98_RS13850 7d3e0ed35acb225c216501f5f3f813b5 314 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 74 88 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site RK98_RS13850 7d3e0ed35acb225c216501f5f3f813b5 314 Pfam PF00348 Polyprenyl synthetase 22 265 4.6E-66 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 RK98_RS12905 d6f8f87e5b357afbf4d884e26e1d4d0e 180 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 8 180 1.3E-61 T 28-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RK98_RS12905 d6f8f87e5b357afbf4d884e26e1d4d0e 180 SUPERFAMILY SSF110391 8 180 2.35E-58 T 28-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RK98_RS12905 d6f8f87e5b357afbf4d884e26e1d4d0e 180 PIRSF PIRSF016897 1 180 1.8E-67 T 28-03-2018 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 RK98_RS12905 d6f8f87e5b357afbf4d884e26e1d4d0e 180 Gene3D G3DSA:3.20.20.400 2 180 1.7E-66 T 28-03-2018 RK98_RS00655 1f3b902743e38b08bdc38ddcbeb6d461 327 PRINTS PR01468 Staphylococcal bi-component toxin signature 64 83 8.7E-28 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS00655 1f3b902743e38b08bdc38ddcbeb6d461 327 PRINTS PR01468 Staphylococcal bi-component toxin signature 245 262 8.7E-28 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS00655 1f3b902743e38b08bdc38ddcbeb6d461 327 PRINTS PR01468 Staphylococcal bi-component toxin signature 125 146 8.7E-28 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS00655 1f3b902743e38b08bdc38ddcbeb6d461 327 Gene3D G3DSA:2.70.240.10 33 315 9.8E-107 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS00655 1f3b902743e38b08bdc38ddcbeb6d461 327 TIGRFAM TIGR01002 hlyII: beta-channel forming cytolysin 5 316 6.5E-133 T 28-03-2018 IPR003963 Bi-component toxin, staphylococci GO:0005576|GO:0009405 RK98_RS00655 1f3b902743e38b08bdc38ddcbeb6d461 327 SUPERFAMILY SSF56959 28 324 7.19E-126 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS00655 1f3b902743e38b08bdc38ddcbeb6d461 327 Pfam PF07968 Leukocidin/Hemolysin toxin family 60 310 5.4E-88 T 28-03-2018 IPR016183 Leukocidin/porin GO:0005576|GO:0051715 RK98_RS08130 f276cc9f46d0d0c9bbaa5c2bcd837e95 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 223 2.2E-71 T 28-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 RK98_RS08130 f276cc9f46d0d0c9bbaa5c2bcd837e95 225 Pfam PF02665 Nitrate reductase gamma subunit 3 222 3.6E-88 T 28-03-2018 IPR023234 NarG-like domain RK98_RS08130 f276cc9f46d0d0c9bbaa5c2bcd837e95 225 SUPERFAMILY SSF103501 1 222 1.7E-71 T 28-03-2018 IPR023234 NarG-like domain RK98_RS08130 f276cc9f46d0d0c9bbaa5c2bcd837e95 225 Gene3D G3DSA:1.20.950.20 1 215 4.4E-43 T 28-03-2018 RK98_RS14445 25cf2541e8be496dea04046e528ed7fb 325 Gene3D G3DSA:1.10.10.10 1 87 6.7E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14445 25cf2541e8be496dea04046e528ed7fb 325 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 325 27.514 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RK98_RS14445 25cf2541e8be496dea04046e528ed7fb 325 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 325 4.5E-104 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RK98_RS14445 25cf2541e8be496dea04046e528ed7fb 325 SUPERFAMILY SSF46785 1 83 3.13E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14445 25cf2541e8be496dea04046e528ed7fb 325 Gene3D G3DSA:3.30.450.40 172 324 3.5E-24 T 28-03-2018 IPR029016 GAF domain-like RK98_RS14445 25cf2541e8be496dea04046e528ed7fb 325 Pfam PF01628 HrcA protein C terminal domain 107 318 2.6E-40 T 28-03-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 RK98_RS14445 25cf2541e8be496dea04046e528ed7fb 325 SUPERFAMILY SSF55781 71 324 1.59E-49 T 28-03-2018 IPR029016 GAF domain-like RK98_RS14445 25cf2541e8be496dea04046e528ed7fb 325 PIRSF PIRSF005485 1 325 2.7E-97 T 28-03-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 RK98_RS00340 7695e23ca591a4be2395e1cd525acb78 553 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 387 533 3.1E-26 T 28-03-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain RK98_RS00340 7695e23ca591a4be2395e1cd525acb78 553 Pfam PF01943 Polysaccharide biosynthesis protein 8 325 9.6E-30 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 RK98_RS00340 7695e23ca591a4be2395e1cd525acb78 553 PIRSF PIRSF038958 2 549 2.8E-89 T 28-03-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type RK98_RS07815 b9965eddbf4cc11cdc03b448d7090b43 466 Pfam PF07690 Major Facilitator Superfamily 26 416 3.7E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 RK98_RS07815 b9965eddbf4cc11cdc03b448d7090b43 466 SUPERFAMILY SSF103473 6 195 1.44E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS07815 b9965eddbf4cc11cdc03b448d7090b43 466 SUPERFAMILY SSF103473 253 463 1.44E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS07815 b9965eddbf4cc11cdc03b448d7090b43 466 Gene3D G3DSA:1.20.1250.20 257 465 1.6E-24 T 28-03-2018 RK98_RS07815 b9965eddbf4cc11cdc03b448d7090b43 466 Gene3D G3DSA:1.20.1250.20 5 204 1.8E-26 T 28-03-2018 RK98_RS12950 f0c7b94e87c37e34a02302de2186e8eb 412 Gene3D G3DSA:3.40.640.10 51 263 1.3E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS12950 f0c7b94e87c37e34a02302de2186e8eb 412 SUPERFAMILY SSF53383 47 390 8.77E-41 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS12950 f0c7b94e87c37e34a02302de2186e8eb 412 Pfam PF06838 Methionine gamma-lyase 6 406 7.9E-197 T 28-03-2018 IPR009651 Putative methionine gamma-lyase RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 PRINTS PR00279 Bacterial toxin signature 171 187 2.3E-11 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 PRINTS PR00279 Bacterial toxin signature 130 142 2.3E-11 T 28-03-2018 IPR006177 Staphylococcal/streptococcal toxin, bacterial GO:0009405 RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 Gene3D G3DSA:2.40.50.110 59 132 9.7E-32 T 28-03-2018 RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 ProSitePatterns PS00277 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin signature 1. 132 141 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 147 254 6.1E-34 T 28-03-2018 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 SUPERFAMILY SSF54334 141 256 7.2E-40 T 28-03-2018 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 171 194 - T 28-03-2018 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 SUPERFAMILY SSF50203 29 143 5.24E-41 T 28-03-2018 IPR008992 Enterotoxin GO:0009405 RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 Pfam PF01123 Staphylococcal/Streptococcal toxin, OB-fold domain 61 137 9.7E-7 T 28-03-2018 IPR006173 Staphylococcal/Streptococcal toxin, OB-fold GO:0009405 RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 Gene3D G3DSA:3.10.20.120 133 254 4.6E-43 T 28-03-2018 RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 PRINTS PR01898 Bacterial superantigen superfamily signature 184 198 2.1E-32 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 PRINTS PR01898 Bacterial superantigen superfamily signature 171 184 2.1E-32 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 PRINTS PR01898 Bacterial superantigen superfamily signature 94 120 2.1E-32 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 PRINTS PR01898 Bacterial superantigen superfamily signature 237 253 2.1E-32 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS01605 c93a28958801c3bb30e250e934a8c0cc 257 PRINTS PR01898 Bacterial superantigen superfamily signature 128 141 2.1E-32 T 28-03-2018 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial RK98_RS08045 4f16368594d76c8c694551b3e7058931 199 SUPERFAMILY SSF52833 22 195 6.56E-34 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS08045 4f16368594d76c8c694551b3e7058931 199 Gene3D G3DSA:3.40.30.10 22 199 3.5E-35 T 28-03-2018 RK98_RS08045 4f16368594d76c8c694551b3e7058931 199 Pfam PF13462 Thioredoxin 31 196 2.2E-27 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS13790 5ed06a460c07334e2ab725e27c1b99d8 400 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 248 394 2.4E-23 T 28-03-2018 IPR032810 CCA-adding enzyme, C-terminal RK98_RS13790 5ed06a460c07334e2ab725e27c1b99d8 400 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 171 228 1.0E-8 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RK98_RS13790 5ed06a460c07334e2ab725e27c1b99d8 400 Pfam PF01743 Poly A polymerase head domain 23 143 3.3E-36 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 RK98_RS13790 5ed06a460c07334e2ab725e27c1b99d8 400 Gene3D G3DSA:3.30.460.10 2 142 4.1E-48 T 28-03-2018 RK98_RS13790 5ed06a460c07334e2ab725e27c1b99d8 400 Hamap MF_01263 CCA-adding enzyme [cca]. 3 398 38.639 T 28-03-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 RK98_RS13790 5ed06a460c07334e2ab725e27c1b99d8 400 SUPERFAMILY SSF81891 141 398 6.54E-47 T 28-03-2018 RK98_RS13790 5ed06a460c07334e2ab725e27c1b99d8 400 Gene3D G3DSA:1.10.3090.10 143 397 1.6E-35 T 28-03-2018 RK98_RS13790 5ed06a460c07334e2ab725e27c1b99d8 400 SUPERFAMILY SSF81301 6 140 5.48E-43 T 28-03-2018 RK98_RS03085 0e35a0b41b4892d8418709ed60317087 250 Pfam PF06778 Chlorite dismutase 33 237 1.6E-75 T 28-03-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase RK98_RS03085 0e35a0b41b4892d8418709ed60317087 250 SUPERFAMILY SSF54909 2 248 1.9E-91 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel RK98_RS03085 0e35a0b41b4892d8418709ed60317087 250 Gene3D G3DSA:3.30.70.1030 4 137 6.4E-37 T 28-03-2018 RK98_RS03085 0e35a0b41b4892d8418709ed60317087 250 Gene3D G3DSA:3.30.70.1100 140 245 4.6E-30 T 28-03-2018 RK98_RS03085 0e35a0b41b4892d8418709ed60317087 250 Hamap MF_01442 Putative heme-dependent peroxidase . 1 249 54.065 T 28-03-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family RK98_RS14505 af5ffb9742600483a2e0db5e0074eb2a 96 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 4.1E-25 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 RK98_RS14505 af5ffb9742600483a2e0db5e0074eb2a 96 Gene3D G3DSA:3.30.110.60 1 96 5.9E-31 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 RK98_RS14505 af5ffb9742600483a2e0db5e0074eb2a 96 SMART SM01103 2 85 2.6E-45 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 RK98_RS14505 af5ffb9742600483a2e0db5e0074eb2a 96 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 6.2E-39 T 28-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 RK98_RS14505 af5ffb9742600483a2e0db5e0074eb2a 96 SUPERFAMILY SSF75471 1 94 1.96E-33 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 RK98_RS14505 af5ffb9742600483a2e0db5e0074eb2a 96 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 96 1.0E-45 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 RK98_RS02530 7fdda0b063e23924172d5afb7e4103d2 205 Pfam PF07099 Protein of unknown function (DUF1361) 30 193 2.3E-36 T 28-03-2018 IPR009793 Protein of unknown function DUF1361 RK98_RS04135 cd76c5071013d198027445acaa741726 125 Pfam PF06125 Bacterial protein of unknown function (DUF961) 6 105 4.8E-37 T 28-03-2018 IPR010365 Protein of unknown function DUF961 RK98_RS12935 2891258e4d1773567bb73c01da9812da 77 Pfam PF17209 Hfq protein 7 66 2.3E-25 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RK98_RS12935 2891258e4d1773567bb73c01da9812da 77 SUPERFAMILY SSF50182 6 64 1.41E-19 T 28-03-2018 IPR010920 LSM domain RK98_RS12935 2891258e4d1773567bb73c01da9812da 77 Gene3D G3DSA:2.30.30.100 5 69 1.7E-27 T 28-03-2018 RK98_RS12935 2891258e4d1773567bb73c01da9812da 77 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.7E-31 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RK98_RS12935 2891258e4d1773567bb73c01da9812da 77 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 65 27.46 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 Pfam PF00344 SecY translocase 65 381 4.4E-44 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 PIRSF PIRSF004557 1 403 2.4E-85 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 SUPERFAMILY SSF103491 4 390 6.67E-68 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 TIGRFAM TIGR02920 acc_sec_Y2: accessory Sec system translocase SecY2 12 399 1.0E-170 T 28-03-2018 IPR014269 Accessory Sec system protein translocase subunit SecY2 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 PRINTS PR00303 Preprotein translocase SecY subunit signature 368 386 3.2E-21 T 28-03-2018 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 PRINTS PR00303 Preprotein translocase SecY subunit signature 17 35 3.2E-21 T 28-03-2018 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 PRINTS PR00303 Preprotein translocase SecY subunit signature 279 301 3.2E-21 T 28-03-2018 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 PRINTS PR00303 Preprotein translocase SecY subunit signature 63 83 3.2E-21 T 28-03-2018 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 PRINTS PR00303 Preprotein translocase SecY subunit signature 334 352 3.2E-21 T 28-03-2018 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 PRINTS PR00303 Preprotein translocase SecY subunit signature 130 155 3.2E-21 T 28-03-2018 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 Hamap MF_01466 Accessory Sec system protein translocase subunit SecY2 [secY2]. 5 399 27.818 T 28-03-2018 IPR014269 Accessory Sec system protein translocase subunit SecY2 RK98_RS06635 9ed16f929ec3d8c780b03785961d7d31 403 Gene3D G3DSA:1.10.3370.10 1 402 2.7E-61 T 28-03-2018 RK98_RS11135 27c5b0454d19072e5037d3cce4986f39 300 SUPERFAMILY SSF56529 81 298 3.4E-70 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RK98_RS11135 27c5b0454d19072e5037d3cce4986f39 300 Gene3D G3DSA:3.90.850.10 60 300 9.3E-71 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RK98_RS11135 27c5b0454d19072e5037d3cce4986f39 300 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 95 298 6.4E-61 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 RK98_RS02215 29d7d22db60c649d57cfb437bb57aa6e 360 Gene3D G3DSA:3.40.50.300 199 355 2.8E-18 T 28-03-2018 RK98_RS02215 29d7d22db60c649d57cfb437bb57aa6e 360 SMART SM00490 245 320 4.5E-7 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS02215 29d7d22db60c649d57cfb437bb57aa6e 360 SMART SM00487 23 205 1.3E-12 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain RK98_RS02215 29d7d22db60c649d57cfb437bb57aa6e 360 Pfam PF04851 Type III restriction enzyme, res subunit 25 173 1.4E-11 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 RK98_RS02215 29d7d22db60c649d57cfb437bb57aa6e 360 SUPERFAMILY SSF52540 45 330 7.83E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02215 29d7d22db60c649d57cfb437bb57aa6e 360 Gene3D G3DSA:3.40.50.300 3 185 2.1E-21 T 28-03-2018 RK98_RS02215 29d7d22db60c649d57cfb437bb57aa6e 360 Pfam PF00271 Helicase conserved C-terminal domain 214 318 2.2E-11 T 28-03-2018 IPR001650 Helicase, C-terminal RK98_RS12645 44c80e57b789ebe1169d8d420508ef20 246 Gene3D G3DSA:3.40.50.450 68 220 4.2E-37 T 28-03-2018 RK98_RS12645 44c80e57b789ebe1169d8d420508ef20 246 SUPERFAMILY SSF102405 37 242 1.6E-25 T 28-03-2018 RK98_RS12645 44c80e57b789ebe1169d8d420508ef20 246 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 26 243 5.5E-66 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 RK98_RS12645 44c80e57b789ebe1169d8d420508ef20 246 Pfam PF02481 DNA recombination-mediator protein A 28 235 3.7E-70 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 RK98_RS07770 ee5dd758e7e1c9cdb7cbbe0f999a9237 545 Pfam PF13520 Amino acid permease 12 432 2.9E-42 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS07770 ee5dd758e7e1c9cdb7cbbe0f999a9237 545 PIRSF PIRSF006060 1 466 7.8E-67 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS07770 ee5dd758e7e1c9cdb7cbbe0f999a9237 545 PIRSF PIRSF006060 462 529 210.0 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS06565 823a24ebb5b547de6e9b2f4c6cc059b0 101 TIGRFAM TIGR03932 PIA_icaD: intracellular adhesion protein D 12 99 1.1E-39 T 28-03-2018 IPR020510 Poly-beta-1,6-N-acetyl-D-glucosamine synthesis protein IcaD RK98_RS06565 823a24ebb5b547de6e9b2f4c6cc059b0 101 ProDom PD068114 ICAD INTERCELLULAR D ADHESION PIA MEMBRANE BIOFILM TRANSMEMBRANE SYNTHESIS 1 101 3.0E-42 T 28-03-2018 IPR020510 Poly-beta-1,6-N-acetyl-D-glucosamine synthesis protein IcaD RK98_RS06455 a4646b2de651007cb51bcadfc2952811 323 SUPERFAMILY SSF63829 6 320 4.58E-65 T 28-03-2018 RK98_RS06455 a4646b2de651007cb51bcadfc2952811 323 Gene3D G3DSA:2.120.10.30 1 323 2.8E-51 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like RK98_RS06455 a4646b2de651007cb51bcadfc2952811 323 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 47 271 4.2E-29 T 28-03-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region RK98_RS01175 967809a0569e3bb6900d3195fd48bd61 383 Pfam PF13394 4Fe-4S single cluster domain 36 137 7.0E-5 T 28-03-2018 RK98_RS01175 967809a0569e3bb6900d3195fd48bd61 383 SUPERFAMILY SSF102114 34 239 2.49E-24 T 28-03-2018 RK98_RS01175 967809a0569e3bb6900d3195fd48bd61 383 Gene3D G3DSA:3.20.20.70 21 375 7.5E-27 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS01175 967809a0569e3bb6900d3195fd48bd61 383 Pfam PF04055 Radical SAM superfamily 37 186 3.6E-11 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS01175 967809a0569e3bb6900d3195fd48bd61 383 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 9 371 1.1E-184 T 28-03-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB RK98_RS01175 967809a0569e3bb6900d3195fd48bd61 383 Pfam PF08756 YfkB-like domain 221 371 1.1E-74 T 28-03-2018 IPR014866 YfkB-like domain RK98_RS13545 6b71d706e43e5862ce7af1492e7d301b 269 Gene3D G3DSA:3.10.180.10 1 125 6.4E-11 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS13545 6b71d706e43e5862ce7af1492e7d301b 269 SUPERFAMILY SSF54593 3 120 5.79E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS13545 6b71d706e43e5862ce7af1492e7d301b 269 SUPERFAMILY SSF54593 142 242 5.99E-6 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS13545 6b71d706e43e5862ce7af1492e7d301b 269 Gene3D G3DSA:3.10.180.10 133 249 3.0E-4 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS09590 21fa5d33a69cf33758b4dbfbf0422eac 173 Pfam PF10740 Domain of unknown function (DUF2529) 1 168 5.5E-61 T 28-03-2018 IPR019676 Domain of unknown function (DUF2529) RK98_RS03540 4a26f014d4b237a923b44367f5e6d955 121 Gene3D G3DSA:3.30.1130.10 2 120 1.2E-32 T 28-03-2018 RK98_RS03540 4a26f014d4b237a923b44367f5e6d955 121 TIGRFAM TIGR00526 folB_dom: FolB domain 3 120 8.3E-31 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RK98_RS03540 4a26f014d4b237a923b44367f5e6d955 121 Pfam PF02152 Dihydroneopterin aldolase 5 116 4.2E-32 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RK98_RS03540 4a26f014d4b237a923b44367f5e6d955 121 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 118 1.6E-37 T 28-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RK98_RS03540 4a26f014d4b237a923b44367f5e6d955 121 SMART SM00905 5 118 9.3E-49 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 RK98_RS03540 4a26f014d4b237a923b44367f5e6d955 121 SUPERFAMILY SSF55620 1 121 3.51E-42 T 28-03-2018 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 131 150 3.3E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 259 278 3.3E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 229 245 3.3E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 38 63 3.3E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 444 461 3.3E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 420 435 3.3E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 365 383 3.3E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 113 131 3.3E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 389 407 3.3E-56 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 Pfam PF01019 Gamma-glutamyltranspeptidase 31 539 5.2E-165 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 SUPERFAMILY SSF56235 9 544 2.51E-157 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal RK98_RS05250 fc4b58eb98e70c976c61cacc10a24922 668 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 17 537 3.1E-151 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 RK98_RS04545 ec444339c78b94ec2b343031583f01be 353 Gene3D G3DSA:3.20.20.30 1 352 1.6E-57 T 28-03-2018 RK98_RS04545 ec444339c78b94ec2b343031583f01be 353 Pfam PF00296 Luciferase-like monooxygenase 31 315 1.6E-40 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RK98_RS04545 ec444339c78b94ec2b343031583f01be 353 SUPERFAMILY SSF51679 14 344 8.37E-66 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 34 145 2.4E-16 T 28-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 SUPERFAMILY SSF52949 1 153 1.29E-16 T 28-03-2018 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 Gene3D G3DSA:3.40.630.10 163 491 1.1E-119 T 28-03-2018 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 177 485 1.7E-106 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 SUPERFAMILY SSF53187 174 490 1.29E-107 T 28-03-2018 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 PRINTS PR00481 Cytosol aminopeptidase signature 313 334 1.3E-48 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 PRINTS PR00481 Cytosol aminopeptidase signature 276 297 1.3E-48 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 PRINTS PR00481 Cytosol aminopeptidase signature 363 378 1.3E-48 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 PRINTS PR00481 Cytosol aminopeptidase signature 254 271 1.3E-48 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 PRINTS PR00481 Cytosol aminopeptidase signature 335 355 1.3E-48 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 Gene3D G3DSA:3.40.220.10 1 157 1.8E-9 T 28-03-2018 RK98_RS11005 8b68deb7d420623dbd073575d60e86dc 491 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 339 346 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 RK98_RS01985 992b8ebb0bc1d5f4030be6f15d7182fc 289 Pfam PF08708 Primase C terminal 1 (PriCT-1) 224 286 4.4E-12 T 28-03-2018 IPR014820 Primase, C-terminal 1 RK98_RS01985 992b8ebb0bc1d5f4030be6f15d7182fc 289 SMART SM00942 223 287 3.3E-22 T 28-03-2018 IPR014820 Primase, C-terminal 1 RK98_RS03655 a037226984ad39c4a80bd401c9d4518e 87 Pfam PF06257 Biofilm formation stimulator VEG 4 74 1.8E-31 T 28-03-2018 IPR009366 Protein Veg GO:0042710 RK98_RS03655 a037226984ad39c4a80bd401c9d4518e 87 Gene3D G3DSA:2.30.30.100 2 76 1.4E-32 T 28-03-2018 RK98_RS03655 a037226984ad39c4a80bd401c9d4518e 87 PIRSF PIRSF037257 1 85 1.2E-37 T 28-03-2018 IPR009366 Protein Veg GO:0042710 RK98_RS13935 0a7d4aecac91bc1ebfbb96a7abc56fe4 317 PIRSF PIRSF021350 1 315 1.1E-104 T 28-03-2018 IPR008308 Uncharacterised conserved protein UCP021350 RK98_RS13935 0a7d4aecac91bc1ebfbb96a7abc56fe4 317 Pfam PF14493 Helix-turn-helix domain 222 305 6.5E-14 T 28-03-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 RK98_RS00060 0d9260a53bf50739c67f212208121fc8 229 Gene3D G3DSA:3.60.15.10 1 229 7.0E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS00060 0d9260a53bf50739c67f212208121fc8 229 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 229 38.648 T 28-03-2018 IPR022877 Protein of unknown funcion UPF0173 RK98_RS00060 0d9260a53bf50739c67f212208121fc8 229 SMART SM00849 7 195 2.8E-19 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS00060 0d9260a53bf50739c67f212208121fc8 229 Pfam PF13483 Beta-lactamase superfamily domain 2 195 4.7E-23 T 28-03-2018 RK98_RS00060 0d9260a53bf50739c67f212208121fc8 229 SUPERFAMILY SSF56281 1 228 6.94E-39 T 28-03-2018 IPR001279 Metallo-beta-lactamase RK98_RS11985 cfc809376016be3b8225a208403a7884 227 TIGRFAM TIGR03656 IsdC: heme uptake protein IsdC 1 227 8.7E-96 T 28-03-2018 IPR019909 Haem uptake protein IsdC GO:0009274|GO:0015886|GO:0030492 RK98_RS11985 cfc809376016be3b8225a208403a7884 227 SUPERFAMILY SSF158911 33 146 5.23E-35 T 28-03-2018 RK98_RS11985 cfc809376016be3b8225a208403a7884 227 Pfam PF05031 Iron Transport-associated domain 33 143 3.6E-25 T 28-03-2018 IPR006635 NEAT domain RK98_RS11985 cfc809376016be3b8225a208403a7884 227 SMART SM00725 27 150 4.7E-46 T 28-03-2018 IPR006635 NEAT domain RK98_RS11985 cfc809376016be3b8225a208403a7884 227 TIGRFAM TIGR03068 srtB_sig_NPQTN: sortase B signal domain, NPQTN class 189 221 9.7E-26 T 28-03-2018 IPR017505 Sortase B signal domain, NPQTN class RK98_RS14230 d2646053aeacb6feb0af1191ed83a8d1 165 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 31 51 7.4E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site RK98_RS14230 d2646053aeacb6feb0af1191ed83a8d1 165 Pfam PF15980 Putative Competence protein ComGF 66 156 8.8E-10 T 28-03-2018 IPR016977 Competence operon G, ComGF RK98_RS14230 d2646053aeacb6feb0af1191ed83a8d1 165 Pfam PF07963 Prokaryotic N-terminal methylation motif 29 51 2.4E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site RK98_RS01280 b8ceff0e0a0a64d9014718e9f495bde9 184 SUPERFAMILY SSF53098 3 170 1.17E-44 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS01280 b8ceff0e0a0a64d9014718e9f495bde9 184 SMART SM00479 5 168 6.3E-29 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RK98_RS01280 b8ceff0e0a0a64d9014718e9f495bde9 184 Gene3D G3DSA:3.30.420.10 2 170 2.2E-37 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS01280 b8ceff0e0a0a64d9014718e9f495bde9 184 Pfam PF00929 Exonuclease 7 158 1.6E-24 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III RK98_RS13685 6d2e7a4984daf75674435ede05419493 346 Gene3D G3DSA:3.40.50.1100 128 334 2.2E-51 T 28-03-2018 RK98_RS13685 6d2e7a4984daf75674435ede05419493 346 Gene3D G3DSA:3.40.50.1100 8 127 1.5E-26 T 28-03-2018 RK98_RS13685 6d2e7a4984daf75674435ede05419493 346 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 319 4.0E-81 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS13685 6d2e7a4984daf75674435ede05419493 346 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 33 336 2.6E-120 T 28-03-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 RK98_RS13685 6d2e7a4984daf75674435ede05419493 346 SUPERFAMILY SSF53686 16 327 1.31E-97 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme RK98_RS13685 6d2e7a4984daf75674435ede05419493 346 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 55 68 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 Pfam PF02073 Thermophilic metalloprotease (M29) 8 414 7.5E-161 T 28-03-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 307 327 1.2E-55 T 28-03-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 395 414 1.2E-55 T 28-03-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 85 104 1.2E-55 T 28-03-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 18 35 1.2E-55 T 28-03-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 330 351 1.2E-55 T 28-03-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 251 270 1.2E-55 T 28-03-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 161 183 1.2E-55 T 28-03-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 369 391 1.2E-55 T 28-03-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 SUPERFAMILY SSF144052 7 415 7.59E-143 T 28-03-2018 RK98_RS01185 aeab2852c8cb557525bcedc259b80a0f 418 Gene3D G3DSA:3.40.1830.10 8 180 2.9E-54 T 28-03-2018 IPR035097 Peptidase M29, N-terminal RK98_RS04965 c5fbb332cd7a39ada68f378e9b84912b 147 Pfam PF03788 LrgA family 27 118 2.9E-24 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 RK98_RS04965 c5fbb332cd7a39ada68f378e9b84912b 147 Hamap MF_01141 Antiholin-like protein LrgA [lrgA]. 7 142 29.479 T 28-03-2018 IPR023736 Antiholin-like protein LrgA RK98_RS12490 6a175803555bc612967c8293a2c02429 247 SMART SM00332 2 240 5.4E-24 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RK98_RS12490 6a175803555bc612967c8293a2c02429 247 SMART SM00331 8 242 2.5E-30 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RK98_RS12490 6a175803555bc612967c8293a2c02429 247 Pfam PF13672 Protein phosphatase 2C 14 214 5.3E-16 T 28-03-2018 RK98_RS12490 6a175803555bc612967c8293a2c02429 247 Gene3D G3DSA:3.60.40.10 2 242 5.3E-40 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RK98_RS12490 6a175803555bc612967c8293a2c02429 247 SUPERFAMILY SSF81606 3 242 3.27E-61 T 28-03-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 RK98_RS09605 11108a73184f0ac47c9f8e474a160aaa 111 Pfam PF01638 HxlR-like helix-turn-helix 13 103 5.2E-17 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type RK98_RS09605 11108a73184f0ac47c9f8e474a160aaa 111 SUPERFAMILY SSF46785 4 102 1.39E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS09605 11108a73184f0ac47c9f8e474a160aaa 111 Gene3D G3DSA:1.10.10.10 1 111 1.7E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07160 1b242d0489defc66251ae04fc8dd8cc9 502 PRINTS PR00419 Adrenodoxin reductase family signature 25 38 4.0E-6 T 28-03-2018 RK98_RS07160 1b242d0489defc66251ae04fc8dd8cc9 502 PRINTS PR00419 Adrenodoxin reductase family signature 2 24 4.0E-6 T 28-03-2018 RK98_RS07160 1b242d0489defc66251ae04fc8dd8cc9 502 Pfam PF01593 Flavin containing amine oxidoreductase 11 495 8.7E-28 T 28-03-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 RK98_RS07160 1b242d0489defc66251ae04fc8dd8cc9 502 SUPERFAMILY SSF51905 1 320 3.14E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS07160 1b242d0489defc66251ae04fc8dd8cc9 502 SUPERFAMILY SSF51905 456 497 3.14E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS07160 1b242d0489defc66251ae04fc8dd8cc9 502 Gene3D G3DSA:3.50.50.60 1 501 3.4E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 RK98_RS07160 1b242d0489defc66251ae04fc8dd8cc9 502 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 4 499 1.4E-131 T 28-03-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 RK98_RS08195 0cc986dfb5aadf0975726dc5aa05e0ac 701 SUPERFAMILY SSF46689 147 196 3.58E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS08195 0cc986dfb5aadf0975726dc5aa05e0ac 701 Gene3D G3DSA:3.90.1240.10 70 364 5.6E-20 T 28-03-2018 RK98_RS08195 0cc986dfb5aadf0975726dc5aa05e0ac 701 SUPERFAMILY SSF46689 200 247 1.7E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS08195 0cc986dfb5aadf0975726dc5aa05e0ac 701 SMART SM00342 163 246 1.1E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS08195 0cc986dfb5aadf0975726dc5aa05e0ac 701 Pfam PF12833 Helix-turn-helix domain 170 246 9.6E-14 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 RK98_RS08195 0cc986dfb5aadf0975726dc5aa05e0ac 701 Gene3D G3DSA:2.60.40.1500 561 701 4.0E-11 T 28-03-2018 RK98_RS05165 d866a35db1291191c188e76858ed1f96 251 PIRSF PIRSF000371 2 48 1.1E-11 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 RK98_RS05165 d866a35db1291191c188e76858ed1f96 251 PIRSF PIRSF000371 44 246 3.8E-47 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 RK98_RS05165 d866a35db1291191c188e76858ed1f96 251 Gene3D G3DSA:3.80.30.10 68 250 1.3E-38 T 28-03-2018 RK98_RS05165 d866a35db1291191c188e76858ed1f96 251 SUPERFAMILY SSF102114 22 227 1.07E-26 T 28-03-2018 RK98_RS05165 d866a35db1291191c188e76858ed1f96 251 Pfam PF04055 Radical SAM superfamily 24 187 9.7E-27 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS05165 d866a35db1291191c188e76858ed1f96 251 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 RK98_RS05165 d866a35db1291191c188e76858ed1f96 251 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 238 1.4E-96 T 28-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 RK98_RS05165 d866a35db1291191c188e76858ed1f96 251 Pfam PF13353 4Fe-4S single cluster domain 15 149 8.8E-18 T 28-03-2018 RK98_RS13185 98158b9ddeea5a4676df829362c9af5c 373 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 241 1.3E-54 T 28-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 RK98_RS13185 98158b9ddeea5a4676df829362c9af5c 373 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 261 347 2.4E-7 T 28-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain RK98_RS13185 98158b9ddeea5a4676df829362c9af5c 373 SUPERFAMILY SSF56300 1 313 2.48E-54 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS13185 98158b9ddeea5a4676df829362c9af5c 373 Pfam PF00149 Calcineurin-like phosphoesterase 1 214 2.0E-15 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 RK98_RS13185 98158b9ddeea5a4676df829362c9af5c 373 Gene3D G3DSA:3.60.21.10 1 68 9.5E-14 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS13185 98158b9ddeea5a4676df829362c9af5c 373 Gene3D G3DSA:3.60.21.10 69 263 2.5E-25 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS07250 10cc5c7c3542b801ebb328e162af7154 143 Pfam PF05257 CHAP domain 39 119 6.4E-13 T 28-03-2018 IPR007921 CHAP domain RK98_RS07250 10cc5c7c3542b801ebb328e162af7154 143 SUPERFAMILY SSF54001 32 132 1.96E-19 T 28-03-2018 RK98_RS06875 349f1e0b8ec51671aae385c1d63cd910 187 Gene3D G3DSA:1.10.10.10 14 171 1.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06875 349f1e0b8ec51671aae385c1d63cd910 187 SUPERFAMILY SSF46785 9 162 4.41E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06875 349f1e0b8ec51671aae385c1d63cd910 187 PIRSF PIRSF006707 1 187 7.0E-46 T 28-03-2018 IPR026282 DNA-binding protein, MJ1563 type RK98_RS02755 8c7235c2ddbd6b3f20d73c62f800afbb 322 SUPERFAMILY SSF82549 1 321 1.52E-115 T 28-03-2018 RK98_RS02755 8c7235c2ddbd6b3f20d73c62f800afbb 322 Pfam PF02733 Dak1 domain 18 318 4.0E-115 T 28-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 RK98_RS02755 8c7235c2ddbd6b3f20d73c62f800afbb 322 Gene3D G3DSA:3.30.1180.20 180 322 1.7E-40 T 28-03-2018 RK98_RS02755 8c7235c2ddbd6b3f20d73c62f800afbb 322 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 2 321 1.4E-144 T 28-03-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 RK98_RS02755 8c7235c2ddbd6b3f20d73c62f800afbb 322 Gene3D G3DSA:3.40.50.10440 12 178 1.8E-68 T 28-03-2018 RK98_RS12110 783ca8d40669cb613fada4c44ba0f26a 195 Gene3D G3DSA:3.90.950.10 1 194 3.9E-70 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like RK98_RS12110 783ca8d40669cb613fada4c44ba0f26a 195 SUPERFAMILY SSF52972 1 190 5.49E-64 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like RK98_RS12110 783ca8d40669cb613fada4c44ba0f26a 195 Pfam PF01725 Ham1 family 4 186 1.3E-55 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 RK98_RS12110 783ca8d40669cb613fada4c44ba0f26a 195 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 191 47.365 T 28-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 RK98_RS12110 783ca8d40669cb613fada4c44ba0f26a 195 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 189 6.0E-61 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 RK98_RS14855 2340e26aa3732dc2bee8568d14faf73b 184 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 179 3.8E-53 T 28-03-2018 IPR001405 RadC protein RK98_RS14855 2340e26aa3732dc2bee8568d14faf73b 184 SUPERFAMILY SSF47781 15 89 2.05E-7 T 28-03-2018 IPR010994 RuvA domain 2-like RK98_RS14855 2340e26aa3732dc2bee8568d14faf73b 184 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site RK98_RS14855 2340e26aa3732dc2bee8568d14faf73b 184 Gene3D G3DSA:3.40.140.10 99 182 6.6E-29 T 28-03-2018 RK98_RS14855 2340e26aa3732dc2bee8568d14faf73b 184 Pfam PF04002 RadC-like JAB domain 103 180 5.8E-27 T 28-03-2018 IPR025657 RadC-like JAB domain RK98_RS06675 43ebd225ed7b6765aaf996db8b9a4d64 186 Gene3D G3DSA:3.40.50.850 1 186 1.4E-37 T 28-03-2018 RK98_RS06675 43ebd225ed7b6765aaf996db8b9a4d64 186 Pfam PF00857 Isochorismatase family 5 169 1.3E-35 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RK98_RS06675 43ebd225ed7b6765aaf996db8b9a4d64 186 SUPERFAMILY SSF52499 3 183 3.92E-46 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 RK98_RS02015 8d007e671ad94ab600551afebd78bf72 215 Gene3D G3DSA:1.10.3100.10 2 111 2.2E-16 T 28-03-2018 IPR027910 YdiL-like domain RK98_RS02015 8d007e671ad94ab600551afebd78bf72 215 Pfam PF01381 Helix-turn-helix 11 64 1.9E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS02015 8d007e671ad94ab600551afebd78bf72 215 SUPERFAMILY SSF47413 6 71 2.31E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS02015 8d007e671ad94ab600551afebd78bf72 215 SMART SM00530 10 67 3.2E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS05715 539cd13508cb4411a622b8ec58e5091b 584 Pfam PF06276 Ferric iron reductase FhuF-like transporter 404 557 6.7E-15 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain RK98_RS05715 539cd13508cb4411a622b8ec58e5091b 584 Pfam PF04183 IucA / IucC family 135 376 1.9E-54 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 RK98_RS04015 ed39a4ce2bb8cd04e23dc93c81f50da4 403 Pfam PF01420 Type I restriction modification DNA specificity domain 20 197 2.8E-6 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RK98_RS04015 ed39a4ce2bb8cd04e23dc93c81f50da4 403 Pfam PF01420 Type I restriction modification DNA specificity domain 225 387 1.3E-7 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 RK98_RS04015 ed39a4ce2bb8cd04e23dc93c81f50da4 403 SUPERFAMILY SSF116734 5 220 2.29E-38 T 28-03-2018 RK98_RS04015 ed39a4ce2bb8cd04e23dc93c81f50da4 403 Gene3D G3DSA:3.90.220.20 1 190 3.2E-22 T 28-03-2018 RK98_RS04015 ed39a4ce2bb8cd04e23dc93c81f50da4 403 Gene3D G3DSA:3.90.220.20 191 388 1.2E-23 T 28-03-2018 RK98_RS04015 ed39a4ce2bb8cd04e23dc93c81f50da4 403 SUPERFAMILY SSF116734 223 402 1.96E-30 T 28-03-2018 RK98_RS04500 cff9f38280418f19398f7a92a2402ea0 74 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 11 73 16.167 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RK98_RS04500 cff9f38280418f19398f7a92a2402ea0 74 Pfam PF02416 mttA/Hcf106 family 14 67 2.3E-19 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 RK98_RS04500 cff9f38280418f19398f7a92a2402ea0 74 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 13 59 1.2E-19 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 RK98_RS00460 d4266d5cab2e22d3d0f22033094b83fa 211 Pfam PF02517 CAAX protease self-immunity 116 203 3.6E-15 T 28-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 RK98_RS01520 b28b8addda6d30c17de1e144db797933 428 Gene3D G3DSA:3.40.640.10 94 311 1.5E-23 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS01520 b28b8addda6d30c17de1e144db797933 428 Pfam PF00155 Aminotransferase class I and II 79 420 4.3E-36 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RK98_RS01520 b28b8addda6d30c17de1e144db797933 428 SUPERFAMILY SSF53383 30 418 7.0E-62 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS01520 b28b8addda6d30c17de1e144db797933 428 Gene3D G3DSA:3.90.1150.10 16 93 0.041 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS01520 b28b8addda6d30c17de1e144db797933 428 Gene3D G3DSA:3.90.1150.10 312 428 1.3E-7 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS01710 3380a03101e389b3fd458d4a84708a2f 138 TIGRFAM TIGR01636 phage_rinA: phage transcriptional regulator, RinA family 7 137 7.2E-13 T 28-03-2018 IPR006523 Transcription activator RinA RK98_RS14275 df0ea112c521545c2d01c64998c7e377 67 SUPERFAMILY SSF158379 5 65 1.96E-21 T 28-03-2018 IPR023164 YqgQ-like domain RK98_RS14275 df0ea112c521545c2d01c64998c7e377 67 Gene3D G3DSA:1.10.287.760 5 67 4.3E-23 T 28-03-2018 IPR023164 YqgQ-like domain RK98_RS14275 df0ea112c521545c2d01c64998c7e377 67 Pfam PF06014 Bacterial protein of unknown function (DUF910) 5 64 5.2E-23 T 28-03-2018 IPR009256 Protein of unknown function DUF910 RK98_RS04475 19177c12d1fe35fd7481c513a9c469ec 209 Pfam PF13346 ABC-2 family transporter protein 3 204 1.6E-33 T 28-03-2018 IPR025699 ABC-2 membrane transporter-like RK98_RS02880 f03cced25914d52b9d14ee995ecdb0a9 160 Pfam PF01899 Na+/H+ ion antiporter subunit 8 158 2.6E-32 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 RK98_RS02880 f03cced25914d52b9d14ee995ecdb0a9 160 PIRSF PIRSF019239 1 160 2.3E-30 T 28-03-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 RK98_RS11355 bdad0552e3a3eb9cd96a3f7812c23896 252 Pfam PF00756 Putative esterase 16 239 2.2E-57 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 RK98_RS11355 bdad0552e3a3eb9cd96a3f7812c23896 252 Gene3D G3DSA:3.40.50.1820 2 252 8.4E-19 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS11355 bdad0552e3a3eb9cd96a3f7812c23896 252 SUPERFAMILY SSF53474 5 243 7.36E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS05435 c4a4f4d3ad7629618fc120317e32bf0c 323 Pfam PF13379 NMT1-like family 32 241 1.3E-22 T 28-03-2018 RK98_RS05435 c4a4f4d3ad7629618fc120317e32bf0c 323 Gene3D G3DSA:3.40.190.10 132 321 9.5E-23 T 28-03-2018 RK98_RS05435 c4a4f4d3ad7629618fc120317e32bf0c 323 SUPERFAMILY SSF53850 34 244 2.3E-30 T 28-03-2018 RK98_RS05435 c4a4f4d3ad7629618fc120317e32bf0c 323 Gene3D G3DSA:3.40.190.10 31 125 8.1E-14 T 28-03-2018 RK98_RS04420 6abb811158296b280266d84e7cfde014 67 PIRSF PIRSF037263 1 65 5.0E-34 T 28-03-2018 IPR009296 Protein of unknown function DUF951 RK98_RS04420 6abb811158296b280266d84e7cfde014 67 Pfam PF06107 Bacterial protein of unknown function (DUF951) 5 59 7.3E-29 T 28-03-2018 IPR009296 Protein of unknown function DUF951 RK98_RS08980 3d9d89c37cec06bb5e71fa5ef24fd6bb 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.723 T 28-03-2018 IPR023053 Ribosomal protein S14, type Z RK98_RS08980 3d9d89c37cec06bb5e71fa5ef24fd6bb 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 28-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08980 3d9d89c37cec06bb5e71fa5ef24fd6bb 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 8.2E-25 T 28-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08980 3d9d89c37cec06bb5e71fa5ef24fd6bb 61 SUPERFAMILY SSF57716 3 61 2.57E-22 T 28-03-2018 RK98_RS08980 3d9d89c37cec06bb5e71fa5ef24fd6bb 61 Gene3D G3DSA:4.10.830.10 1 61 7.4E-22 T 28-03-2018 RK98_RS08265 ab72b9ead46277ad0f7e4ae94586ea5b 171 Gene3D G3DSA:3.40.630.30 1 171 1.2E-31 T 28-03-2018 RK98_RS08265 ab72b9ead46277ad0f7e4ae94586ea5b 171 SUPERFAMILY SSF55729 4 159 1.37E-31 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS08265 ab72b9ead46277ad0f7e4ae94586ea5b 171 Pfam PF00583 Acetyltransferase (GNAT) family 43 147 2.3E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS00285 9cbb3f017e64a1b9ca7b510de5d26050 285 Pfam PF07285 Protein of unknown function (DUF1444) 1 263 1.1E-125 T 28-03-2018 IPR010838 Protein of unknown unction DUF1444 RK98_RS00285 9cbb3f017e64a1b9ca7b510de5d26050 285 Hamap MF_01548 UPF0354 protein . 1 266 46.348 T 28-03-2018 IPR010838 Protein of unknown unction DUF1444 RK98_RS00285 9cbb3f017e64a1b9ca7b510de5d26050 285 PIRSF PIRSF012562 1 265 1.2E-139 T 28-03-2018 IPR010838 Protein of unknown unction DUF1444 RK98_RS13830 c144c358fc8b068549db8f5bfe1caee2 354 Gene3D G3DSA:3.40.50.1970 2 166 2.0E-43 T 28-03-2018 RK98_RS13830 c144c358fc8b068549db8f5bfe1caee2 354 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 348 34.721 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RK98_RS13830 c144c358fc8b068549db8f5bfe1caee2 354 Pfam PF01761 3-dehydroquinate synthase 62 316 4.8E-87 T 28-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RK98_RS13830 c144c358fc8b068549db8f5bfe1caee2 354 SUPERFAMILY SSF56796 1 351 2.62E-90 T 28-03-2018 RK98_RS13830 c144c358fc8b068549db8f5bfe1caee2 354 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 12 343 4.4E-112 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RK98_RS13830 c144c358fc8b068549db8f5bfe1caee2 354 PIRSF PIRSF001455 1 354 3.5E-107 T 28-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 RK98_RS13830 c144c358fc8b068549db8f5bfe1caee2 354 Gene3D G3DSA:1.20.1090.10 167 354 1.3E-44 T 28-03-2018 RK98_RS09675 e361d9a4e19b845fd0ded2ff2092a160 150 Pfam PF03899 ATP synthase I chain 45 134 2.7E-6 T 28-03-2018 IPR005598 ATP synthase protein I RK98_RS03450 198305301686dbab891e73eb1f6e906b 295 SUPERFAMILY SSF51366 19 268 1.22E-71 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RK98_RS03450 198305301686dbab891e73eb1f6e906b 295 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 10 295 1.2E-152 T 28-03-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RK98_RS03450 198305301686dbab891e73eb1f6e906b 295 PIRSF PIRSF029271 2 295 5.5E-152 T 28-03-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RK98_RS03450 198305301686dbab891e73eb1f6e906b 295 Gene3D G3DSA:3.20.20.70 19 272 1.9E-73 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS03450 198305301686dbab891e73eb1f6e906b 295 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 5 295 52.734 T 28-03-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RK98_RS03450 198305301686dbab891e73eb1f6e906b 295 Pfam PF01680 SOR/SNZ family 9 213 4.1E-107 T 28-03-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RK98_RS03450 198305301686dbab891e73eb1f6e906b 295 ProSitePatterns PS01235 PdxS/SNZ family signature. 206 224 - T 28-03-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 RK98_RS01410 261982653be55bb46034fb373874cf59 520 Pfam PF00939 Sodium:sulfate symporter transmembrane region 41 504 4.7E-94 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RK98_RS01410 261982653be55bb46034fb373874cf59 520 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 55 502 4.2E-88 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 RK98_RS07270 dcdb7d81195b67c247c46c9d49a8750a 229 Pfam PF04172 LrgB-like family 14 225 3.6E-69 T 28-03-2018 IPR007300 CidB/LrgB family RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 312 49.471 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 1 144 6.8E-63 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 1 313 8.5E-147 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 Gene3D G3DSA:3.90.226.10 9 303 1.1E-64 T 28-03-2018 RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 165 178 1.6E-45 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 193 202 1.6E-45 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 149 162 1.6E-45 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 130 146 1.6E-45 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 84 95 1.6E-45 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 109 127 1.6E-45 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 RK98_RS00025 d6470f163a5bd811e26748ceed7bd293 314 SUPERFAMILY SSF52096 3 312 3.06E-96 T 28-03-2018 IPR029045 ClpP/crotonase-like domain RK98_RS06440 5eebd98723e9b22b216b5a7d50e5b92e 255 SUPERFAMILY SSF158560 1 79 6.15E-8 T 28-03-2018 RK98_RS06440 5eebd98723e9b22b216b5a7d50e5b92e 255 Gene3D G3DSA:1.10.1900.10 1 67 1.8E-8 T 28-03-2018 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 PRINTS PR00834 HtrA/DegQ protease family signature 565 589 2.3E-25 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 PRINTS PR00834 HtrA/DegQ protease family signature 721 733 2.3E-25 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 PRINTS PR00834 HtrA/DegQ protease family signature 502 514 2.3E-25 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 PRINTS PR00834 HtrA/DegQ protease family signature 523 543 2.3E-25 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 PRINTS PR00834 HtrA/DegQ protease family signature 609 626 2.3E-25 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 PRINTS PR00834 HtrA/DegQ protease family signature 631 648 2.3E-25 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 Gene3D G3DSA:2.40.10.10 566 675 5.5E-30 T 28-03-2018 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 Pfam PF13365 Trypsin-like peptidase domain 490 638 4.4E-30 T 28-03-2018 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 Gene3D G3DSA:2.40.10.10 450 565 1.3E-21 T 28-03-2018 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 SUPERFAMILY SSF50156 659 773 7.62E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 SMART SM00228 676 764 2.9E-5 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 Gene3D G3DSA:2.30.42.10 676 774 1.8E-19 T 28-03-2018 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 Pfam PF13180 PDZ domain 677 773 1.1E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 RK98_RS11395 172fd432215d8cf49c498739cbc65fea 774 SUPERFAMILY SSF50494 457 672 1.46E-46 T 28-03-2018 IPR009003 Peptidase S1, PA clan RK98_RS01375 cb37e655be1f9044e0a822477d9992c6 57 Pfam PF14044 NETI protein 2 54 4.7E-27 T 28-03-2018 IPR025930 NETI protein RK98_RS08465 d8a57ef77be1516bb4d1e2d43d5aca77 139 Gene3D G3DSA:3.10.180.10 1 135 1.9E-24 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS08465 d8a57ef77be1516bb4d1e2d43d5aca77 139 Hamap MF_01512 Metallothiol transferase FosB [fosB]. 1 138 43.385 T 28-03-2018 IPR022858 Metallothiol transferase FosB GO:0016765|GO:0046677 RK98_RS08465 d8a57ef77be1516bb4d1e2d43d5aca77 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 116 2.6E-13 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain RK98_RS08465 d8a57ef77be1516bb4d1e2d43d5aca77 139 SUPERFAMILY SSF54593 1 129 3.3E-28 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase RK98_RS12620 7a6b6ea2d3468895247db0f5f421af2d 255 Hamap MF_00052_B Ribonuclease HII [rnhB]. 73 251 34.892 T 28-03-2018 IPR022898 Ribonuclease HII GO:0004523 RK98_RS12620 7a6b6ea2d3468895247db0f5f421af2d 255 Gene3D G3DSA:3.30.420.10 48 255 1.1E-63 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS12620 7a6b6ea2d3468895247db0f5f421af2d 255 Pfam PF01351 Ribonuclease HII 75 249 1.8E-34 T 28-03-2018 IPR024567 Ribonuclease HII/HIII domain RK98_RS12620 7a6b6ea2d3468895247db0f5f421af2d 255 SUPERFAMILY SSF53098 68 254 1.2E-61 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 RK98_RS01690 8ed51b7960db71627d386b7ecec281df 395 Pfam PF04860 Phage portal protein 37 349 5.0E-40 T 28-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein RK98_RS01690 8ed51b7960db71627d386b7ecec281df 395 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 27 354 4.6E-94 T 28-03-2018 IPR006427 Phage portal protein, HK97 RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 185 0.0032 T 28-03-2018 RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 8.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.1E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 SUPERFAMILY SSF51735 3 256 2.47E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 Gene3D G3DSA:3.40.50.720 44 258 8.9E-60 T 28-03-2018 RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 Gene3D G3DSA:3.40.50.720 1 43 6.0E-10 T 28-03-2018 RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 255 4.5E-58 T 28-03-2018 RK98_RS05670 b1143a63010bce5e13d7a7523d25d198 258 TIGRFAM TIGR02415 23BDH: acetoin reductases 5 258 2.3E-126 T 28-03-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00650+1.1.1.304+1.1.1.30|MetaCyc: PWY-6389 RK98_RS04710 7e1066d7cdbe9165f048724d0f81b690 225 SMART SM00382 30 223 3.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS04710 7e1066d7cdbe9165f048724d0f81b690 225 SUPERFAMILY SSF52540 1 219 6.49E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04710 7e1066d7cdbe9165f048724d0f81b690 225 Gene3D G3DSA:3.40.50.300 1 225 5.8E-60 T 28-03-2018 RK98_RS04710 7e1066d7cdbe9165f048724d0f81b690 225 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS04710 7e1066d7cdbe9165f048724d0f81b690 225 Pfam PF00005 ABC transporter 22 168 1.5E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS11840 47c7166bd1d9d06f2ab730081078bd09 339 Gene3D G3DSA:1.20.1070.10 1 310 1.7E-6 T 28-03-2018 RK98_RS11840 47c7166bd1d9d06f2ab730081078bd09 339 Pfam PF13273 Protein of unknown function (DUF4064) 14 125 2.9E-18 T 28-03-2018 IPR025273 Domain of unknown function DUF4064 RK98_RS04870 965db1d8828bb544883cd9eac8ad1d7f 306 Gene3D G3DSA:3.40.1710.10 34 239 2.4E-14 T 28-03-2018 RK98_RS04870 965db1d8828bb544883cd9eac8ad1d7f 306 Pfam PF12698 ABC-2 family transporter protein 18 305 1.1E-11 T 28-03-2018 RK98_RS08940 4e0e0cd1dd920b9c8bff246851bef3ec 117 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 28-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS08940 4e0e0cd1dd920b9c8bff246851bef3ec 117 Gene3D G3DSA:3.90.470.10 1 117 5.5E-43 T 28-03-2018 RK98_RS08940 4e0e0cd1dd920b9c8bff246851bef3ec 117 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 1.2E-35 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RK98_RS08940 4e0e0cd1dd920b9c8bff246851bef3ec 117 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.448 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08940 4e0e0cd1dd920b9c8bff246851bef3ec 117 SUPERFAMILY SSF54843 1 111 5.1E-43 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 RK98_RS08940 4e0e0cd1dd920b9c8bff246851bef3ec 117 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 6.0E-47 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS04280 77680b20b137079af710ebfd7d559e06 135 ProDom PD458455 UPF0355 MW0363 SE2351 MRSA252 SSP2326 SH2586 SA0372 SAV0387 SACOL0457 SERP0066 1 135 2.0E-73 T 28-03-2018 RK98_RS04280 77680b20b137079af710ebfd7d559e06 135 Pfam PF11181 Heat induced stress protein YflT 4 100 1.1E-13 T 28-03-2018 IPR025889 General stress protein 17M-like domain RK98_RS12885 9a1fdc08e4b927467473feae0829ae45 121 SUPERFAMILY SSF158622 1 117 9.94E-26 T 28-03-2018 IPR023378 YheA/YmcA-like domain RK98_RS12885 9a1fdc08e4b927467473feae0829ae45 121 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 7 109 7.4E-15 T 28-03-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA RK98_RS12885 9a1fdc08e4b927467473feae0829ae45 121 PIRSF PIRSF021287 1 121 2.4E-44 T 28-03-2018 IPR016783 Biofilm formation YmcA RK98_RS12885 9a1fdc08e4b927467473feae0829ae45 121 Gene3D G3DSA:1.20.1500.10 6 114 2.8E-20 T 28-03-2018 IPR023378 YheA/YmcA-like domain RK98_RS10510 5ab4e8f8d27f94916bc77321add12380 109 SUPERFAMILY SSF47413 9 71 3.38E-20 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS10510 5ab4e8f8d27f94916bc77321add12380 109 Gene3D G3DSA:1.10.260.40 1 109 1.1E-21 T 28-03-2018 RK98_RS10510 5ab4e8f8d27f94916bc77321add12380 109 Pfam PF01381 Helix-turn-helix 14 64 1.2E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS10510 5ab4e8f8d27f94916bc77321add12380 109 SMART SM00530 13 68 7.7E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS06430 c0a9dccdab31caf5575d6dcb71c73e72 154 SUPERFAMILY SSF109854 33 144 3.48E-7 T 28-03-2018 IPR034660 DinB/YfiT-like putative metalloenzymes RK98_RS06430 c0a9dccdab31caf5575d6dcb71c73e72 154 Gene3D G3DSA:1.20.120.450 6 151 2.1E-8 T 28-03-2018 RK98_RS12310 ed3734ea19f9c946658c701dba3103ce 439 Gene3D G3DSA:3.10.20.310 195 431 5.6E-4 T 28-03-2018 RK98_RS12310 ed3734ea19f9c946658c701dba3103ce 439 Pfam PF08478 POTRA domain, FtsQ-type 195 262 3.0E-18 T 28-03-2018 IPR013685 POTRA domain, FtsQ-type RK98_RS12310 ed3734ea19f9c946658c701dba3103ce 439 Hamap MF_00912 Cell division protein DivIB [divIB]. 55 408 31.504 T 28-03-2018 IPR026580 Cell division protein DivIB RK98_RS14860 28b615e3b110338e7907a68edc2ad079 235 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 10 88 1.7E-19 T 28-03-2018 IPR010627 Peptidase A24A, N-terminal RK98_RS09300 fe09e7789c4aee7f584c901aeefbf14c 322 SUPERFAMILY SSF81345 4 320 2.88E-79 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS09300 fe09e7789c4aee7f584c901aeefbf14c 322 Gene3D G3DSA:1.10.3470.10 1 322 5.4E-65 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS09300 fe09e7789c4aee7f584c901aeefbf14c 322 Pfam PF01032 FecCD transport family 16 320 1.1E-89 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RK98_RS07755 d22426fcfbbc45c7495f99ad6047aa38 258 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 1 247 1.1E-65 T 28-03-2018 IPR005226 UPF0014 family RK98_RS07755 d22426fcfbbc45c7495f99ad6047aa38 258 Pfam PF03649 Uncharacterised protein family (UPF0014) 4 241 2.7E-65 T 28-03-2018 IPR005226 UPF0014 family RK98_RS14390 174cca143274cd6121e4fda4b11004be 315 Pfam PF02562 PhoH-like protein 109 312 3.5E-94 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 RK98_RS14390 174cca143274cd6121e4fda4b11004be 315 Gene3D G3DSA:3.40.50.300 106 312 6.0E-31 T 28-03-2018 RK98_RS14390 174cca143274cd6121e4fda4b11004be 315 SUPERFAMILY SSF54791 12 69 6.33E-6 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 RK98_RS14390 174cca143274cd6121e4fda4b11004be 315 SUPERFAMILY SSF52540 53 288 1.99E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05260 04b1c945a420f9e16f07f8fcd6f71eb8 387 SUPERFAMILY SSF161098 183 368 2.35E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS05260 04b1c945a420f9e16f07f8fcd6f71eb8 387 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 205 386 1.9E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS05260 04b1c945a420f9e16f07f8fcd6f71eb8 387 Gene3D G3DSA:1.10.3720.10 122 387 1.1E-41 T 28-03-2018 RK98_RS09035 61df0bb70ad794e262927556d5e31e16 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 2.4E-33 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS09035 61df0bb70ad794e262927556d5e31e16 121 Gene3D G3DSA:4.10.910.10 86 121 3.1E-26 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS09035 61df0bb70ad794e262927556d5e31e16 121 Gene3D G3DSA:4.10.910.10 67 85 1.1E-17 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS09035 61df0bb70ad794e262927556d5e31e16 121 Gene3D G3DSA:1.10.8.50 1 66 1.5E-26 T 28-03-2018 RK98_RS09035 61df0bb70ad794e262927556d5e31e16 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 28.604 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS09035 61df0bb70ad794e262927556d5e31e16 121 PIRSF PIRSF002134 1 121 5.1E-43 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS09035 61df0bb70ad794e262927556d5e31e16 121 SUPERFAMILY SSF46946 2 112 3.24E-45 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 RK98_RS09035 61df0bb70ad794e262927556d5e31e16 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 28-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 RK98_RS09035 61df0bb70ad794e262927556d5e31e16 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 3.3E-53 T 28-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS10515 5a8591b28462c9eeda9ffded72b0ad75 63 Pfam PF01381 Helix-turn-helix 8 59 1.9E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS10515 5a8591b28462c9eeda9ffded72b0ad75 63 SMART SM00530 6 61 3.1E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS10515 5a8591b28462c9eeda9ffded72b0ad75 63 SUPERFAMILY SSF47413 7 61 7.78E-12 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS10515 5a8591b28462c9eeda9ffded72b0ad75 63 Gene3D G3DSA:3.30.1190.10 28 63 1.9E-7 T 28-03-2018 RK98_RS10515 5a8591b28462c9eeda9ffded72b0ad75 63 Gene3D G3DSA:1.10.10.10 1 27 1.7E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02235 9692a8dfb56697f3c90d87727ba96dce 356 Gene3D G3DSA:3.30.70.270 179 352 7.3E-42 T 28-03-2018 RK98_RS02235 9692a8dfb56697f3c90d87727ba96dce 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 350 5.3E-41 T 28-03-2018 IPR000160 GGDEF domain RK98_RS02235 9692a8dfb56697f3c90d87727ba96dce 356 SMART SM00267 177 351 2.5E-37 T 28-03-2018 IPR000160 GGDEF domain RK98_RS02235 9692a8dfb56697f3c90d87727ba96dce 356 SUPERFAMILY SSF55073 193 350 9.42E-37 T 28-03-2018 IPR029787 Nucleotide cyclase RK98_RS02235 9692a8dfb56697f3c90d87727ba96dce 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 189 347 2.3E-35 T 28-03-2018 IPR000160 GGDEF domain RK98_RS02235 9692a8dfb56697f3c90d87727ba96dce 356 Pfam PF07694 5TMR of 5TMR-LYT 16 175 2.5E-13 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 RK98_RS06885 411aab47eae9a08f706422675ea11932 496 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 RK98_RS06885 411aab47eae9a08f706422675ea11932 496 Gene3D G3DSA:3.40.605.10 4 270 1.9E-94 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 RK98_RS06885 411aab47eae9a08f706422675ea11932 496 Pfam PF00171 Aldehyde dehydrogenase family 17 482 1.4E-175 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 RK98_RS06885 411aab47eae9a08f706422675ea11932 496 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 12 477 2.3E-234 T 28-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 RK98_RS06885 411aab47eae9a08f706422675ea11932 496 Gene3D G3DSA:3.40.309.10 271 468 2.1E-76 T 28-03-2018 RK98_RS06885 411aab47eae9a08f706422675ea11932 496 SUPERFAMILY SSF53720 8 488 2.36E-169 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 RK98_RS06885 411aab47eae9a08f706422675ea11932 496 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 RK98_RS11045 1c1f38f2406dea74b2acb8b1963f53a2 109 TIGRFAM TIGR00941 2a6301s03: multicomponent Na+:H+ antiporter, MnhC subunit 1 100 1.3E-50 T 28-03-2018 IPR006673 Mnh complex subunit C1 GO:0006812|GO:0008324 RK98_RS11045 1c1f38f2406dea74b2acb8b1963f53a2 109 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 2 103 2.6E-32 T 28-03-2018 RK98_RS12230 f1b99960411e7b4526d6e0f518450235 501 Pfam PF03606 C4-dicarboxylate anaerobic carrier 1 497 1.9E-175 T 28-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 RK98_RS07505 02279512dab3c1758691aab2b41e30d3 247 Gene3D G3DSA:1.10.10.10 1 126 3.9E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07505 02279512dab3c1758691aab2b41e30d3 247 SUPERFAMILY SSF46785 5 118 3.24E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07505 02279512dab3c1758691aab2b41e30d3 247 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 10 116 2.0E-33 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS07505 02279512dab3c1758691aab2b41e30d3 247 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 135 241 1.3E-30 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS07505 02279512dab3c1758691aab2b41e30d3 247 SUPERFAMILY SSF46785 131 239 6.52E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07505 02279512dab3c1758691aab2b41e30d3 247 Gene3D G3DSA:1.10.10.10 145 241 2.7E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS04140 2ba60a3afb78eb09734cb8648cec6bed 257 Gene3D G3DSA:3.40.630.30 6 162 3.9E-5 T 28-03-2018 RK98_RS04140 2ba60a3afb78eb09734cb8648cec6bed 257 ProDom PD038622 DNA MOM-LIKE MU MODIFICATION PHAGE MOM 16 222 2.0E-121 T 28-03-2018 IPR020291 DNA modification protein Mom RK98_RS04140 2ba60a3afb78eb09734cb8648cec6bed 257 SUPERFAMILY SSF55729 14 145 7.16E-6 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS09985 4306b7d28ebcc4cf964cfc3ef6a86049 190 SUPERFAMILY SSF52016 5 187 5.1E-55 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RK98_RS09985 4306b7d28ebcc4cf964cfc3ef6a86049 190 Gene3D G3DSA:3.20.19.10 1 171 1.1E-45 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel RK98_RS09985 4306b7d28ebcc4cf964cfc3ef6a86049 190 Pfam PF00694 Aconitase C-terminal domain 7 125 2.6E-33 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 RK98_RS09985 4306b7d28ebcc4cf964cfc3ef6a86049 190 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 5 182 1.7E-66 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 RK98_RS09985 4306b7d28ebcc4cf964cfc3ef6a86049 190 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 4 190 39.247 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 RK98_RS08570 9906a1bbb361276098dbea7b74b94abf 230 Gene3D G3DSA:1.10.10.10 1 65 6.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08570 9906a1bbb361276098dbea7b74b94abf 230 SUPERFAMILY SSF46785 1 61 7.72E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08570 9906a1bbb361276098dbea7b74b94abf 230 Pfam PF08279 HTH domain 6 61 6.9E-13 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 RK98_RS08570 9906a1bbb361276098dbea7b74b94abf 230 SMART SM00420 6 62 1.4E-4 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 RK98_RS03175 55af26e2ef43c125928e14906e959704 210 SUPERFAMILY SSF51366 3 208 2.18E-40 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RK98_RS03175 55af26e2ef43c125928e14906e959704 210 SMART SM00934 2 203 2.1E-37 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS03175 55af26e2ef43c125928e14906e959704 210 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 202 8.8E-30 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 RK98_RS03175 55af26e2ef43c125928e14906e959704 210 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 2 207 1.2E-89 T 28-03-2018 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|MetaCyc: PWY-7796 RK98_RS03175 55af26e2ef43c125928e14906e959704 210 Gene3D G3DSA:3.20.20.70 1 208 3.5E-38 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS13735 61f25f67163c24172344232a926c84ee 116 Gene3D G3DSA:1.20.120.440 1 111 1.0E-39 T 28-03-2018 IPR023351 YppE-like domain RK98_RS13735 61f25f67163c24172344232a926c84ee 116 SUPERFAMILY SSF140415 1 109 1.7E-34 T 28-03-2018 IPR023351 YppE-like domain RK98_RS13735 61f25f67163c24172344232a926c84ee 116 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 6 107 4.8E-31 T 28-03-2018 IPR014913 Protein of unknown function DUF1798 RK98_RS00450 1e799b00b06a3d31a21c6c096781fe26 147 Pfam PF06338 ComK protein 17 143 3.0E-10 T 28-03-2018 IPR010461 Competence protein ComK GO:0030420 RK98_RS13495 3f3ef80c9f0f64a528613e67fece3f27 66 PIRSF PIRSF002599 1 66 1.2E-25 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 RK98_RS13495 3f3ef80c9f0f64a528613e67fece3f27 66 SUPERFAMILY SSF50249 1 65 3.8E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS13495 3f3ef80c9f0f64a528613e67fece3f27 66 PRINTS PR00050 Cold shock protein signature 4 19 5.8E-20 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS13495 3f3ef80c9f0f64a528613e67fece3f27 66 PRINTS PR00050 Cold shock protein signature 39 57 5.8E-20 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS13495 3f3ef80c9f0f64a528613e67fece3f27 66 PRINTS PR00050 Cold shock protein signature 24 33 5.8E-20 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS13495 3f3ef80c9f0f64a528613e67fece3f27 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 28-03-2018 IPR019844 Cold-shock conserved site RK98_RS13495 3f3ef80c9f0f64a528613e67fece3f27 66 SMART SM00357 3 66 5.9E-31 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 RK98_RS13495 3f3ef80c9f0f64a528613e67fece3f27 66 Gene3D G3DSA:2.40.50.140 1 66 6.3E-28 T 28-03-2018 RK98_RS13495 3f3ef80c9f0f64a528613e67fece3f27 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 5.5E-31 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 RK98_RS08040 2b8378cff4c71a120567488da7a57987 120 Pfam PF14729 Domain of unknown function with cystatin-like fold (DUF4467) 23 117 1.8E-38 T 28-03-2018 IPR028075 Domain of unknown function with cystatin-like fold DUF4467 RK98_RS11875 c47ab0f36668d3372bba9672a2845bf4 55 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 2 50 1.9E-20 T 28-03-2018 IPR019241 Protein of unknown function DUF2197 RK98_RS04650 6007e8ee9d922d5cb63fda6e0997ea37 691 Gene3D G3DSA:3.40.50.1820 295 687 2.7E-96 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS04650 6007e8ee9d922d5cb63fda6e0997ea37 691 Pfam PF04650 YSIRK type signal peptide 7 30 1.3E-9 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS04650 6007e8ee9d922d5cb63fda6e0997ea37 691 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 3 39 2.5E-13 T 28-03-2018 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 RK98_RS04650 6007e8ee9d922d5cb63fda6e0997ea37 691 SUPERFAMILY SSF53474 304 652 3.77E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS05040 9c1628dbd0b8758c97e9f24a841c57bb 419 PIRSF PIRSF006304 4 419 2.6E-173 T 28-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 RK98_RS05040 9c1628dbd0b8758c97e9f24a841c57bb 419 Pfam PF03611 PTS system sugar-specific permease component 11 392 1.9E-91 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 RK98_RS05040 9c1628dbd0b8758c97e9f24a841c57bb 419 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 11 416 2.9E-193 T 28-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 RK98_RS01610 50d24502801fd8a1fc820438d9c64758 124 Gene3D G3DSA:1.20.1170.10 1 121 1.3E-4 T 28-03-2018 RK98_RS08590 9db0f9629b046013625e5d6e086a2c5b 157 Pfam PF07849 Protein of unknown function (DUF1641) 117 155 4.9E-11 T 28-03-2018 IPR012440 Protein of unknown function DUF1641 RK98_RS06210 ed6840544d4612a5b2e48971ee9c4adf 444 Pfam PF07435 YycH protein 5 441 3.3E-134 T 28-03-2018 IPR009996 Regulatory protein YycH RK98_RS08800 57e17441c6b44ce7c15e48c06d006925 340 Pfam PF04055 Radical SAM superfamily 19 182 1.4E-25 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 RK98_RS08800 57e17441c6b44ce7c15e48c06d006925 340 Pfam PF13394 4Fe-4S single cluster domain 21 113 8.1E-7 T 28-03-2018 RK98_RS08800 57e17441c6b44ce7c15e48c06d006925 340 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 RK98_RS08800 57e17441c6b44ce7c15e48c06d006925 340 SUPERFAMILY SSF102114 7 308 6.8E-81 T 28-03-2018 RK98_RS08800 57e17441c6b44ce7c15e48c06d006925 340 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 340 41.393 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 RK98_RS08800 57e17441c6b44ce7c15e48c06d006925 340 Gene3D G3DSA:3.20.20.70 1 340 2.1E-84 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS08800 57e17441c6b44ce7c15e48c06d006925 340 SMART SM00729 14 222 1.1E-5 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 RK98_RS08800 57e17441c6b44ce7c15e48c06d006925 340 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 340 2.8E-121 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 RK98_RS08800 57e17441c6b44ce7c15e48c06d006925 340 Pfam PF06463 Molybdenum Cofactor Synthesis C 189 317 2.6E-38 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 RK98_RS01660 1b3ec3045cbc39ef2463dbba514bdc8c 134 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 9 94 1.6E-5 T 28-03-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component RK98_RS07030 ed6ef6de2a7026d114f80eb236260e34 122 Gene3D G3DSA:1.20.58.70 13 117 8.4E-4 T 28-03-2018 RK98_RS14035 62207160cf41c42eccc45f7f7ae075ce 251 Pfam PF00106 short chain dehydrogenase 5 185 1.2E-26 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS14035 62207160cf41c42eccc45f7f7ae075ce 251 Gene3D G3DSA:3.40.50.720 1 251 3.0E-40 T 28-03-2018 RK98_RS14035 62207160cf41c42eccc45f7f7ae075ce 251 SUPERFAMILY SSF51735 1 246 9.05E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain RK98_RS14035 62207160cf41c42eccc45f7f7ae075ce 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS14035 62207160cf41c42eccc45f7f7ae075ce 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 181 3.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS14035 62207160cf41c42eccc45f7f7ae075ce 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 3.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS14035 62207160cf41c42eccc45f7f7ae075ce 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.7E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR RK98_RS08760 02643ff69e47bf776281b0c33d6bb8f2 334 Gene3D G3DSA:3.40.50.720 22 268 2.8E-53 T 28-03-2018 RK98_RS08760 02643ff69e47bf776281b0c33d6bb8f2 334 Pfam PF00899 ThiF family 6 240 7.6E-50 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RK98_RS08760 02643ff69e47bf776281b0c33d6bb8f2 334 SUPERFAMILY SSF69572 3 321 2.49E-75 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RK98_RS11960 17a74a95f55088ead6fe1d7f9ce3cc5e 185 Pfam PF02620 Uncharacterized ACR, COG1399 55 180 1.1E-20 T 28-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD RK98_RS00900 195e064b7a3bf9d590b23fc54a39d3ed 199 Gene3D G3DSA:3.40.50.1360 129 199 1.7E-8 T 28-03-2018 RK98_RS00900 195e064b7a3bf9d590b23fc54a39d3ed 199 SUPERFAMILY SSF100950 3 196 4.74E-23 T 28-03-2018 RK98_RS00900 195e064b7a3bf9d590b23fc54a39d3ed 199 Gene3D G3DSA:3.40.50.1360 2 127 2.1E-5 T 28-03-2018 RK98_RS12145 a47e9d255750cd8eb1694c988627c6a4 165 SUPERFAMILY SSF158366 105 165 1.05E-29 T 28-03-2018 IPR021033 Extracellular fibrinogen binding protein, C-terminal GO:0001848|GO:0005615 RK98_RS12145 a47e9d255750cd8eb1694c988627c6a4 165 Pfam PF12199 Extracellular fibrinogen binding protein C terminal 101 165 5.1E-38 T 28-03-2018 IPR021033 Extracellular fibrinogen binding protein, C-terminal GO:0001848|GO:0005615 RK98_RS12755 4e5dbe15095d7875f285ebd8d04e9974 105 Gene3D G3DSA:3.30.1330.30 3 101 7.1E-19 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like RK98_RS12755 4e5dbe15095d7875f285ebd8d04e9974 105 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 95 8.4E-16 T 28-03-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 RK98_RS12755 4e5dbe15095d7875f285ebd8d04e9974 105 SUPERFAMILY SSF55315 5 100 2.9E-28 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like RK98_RS07720 fff4079f0a04f8b59f2ba970f979e4aa 525 PIRSF PIRSF500060 1 525 2.5E-219 T 28-03-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria RK98_RS07720 fff4079f0a04f8b59f2ba970f979e4aa 525 PIRSF PIRSF006429 1 524 7.6E-160 T 28-03-2018 IPR024188 Glutamate synthase large subunit-like protein RK98_RS07720 fff4079f0a04f8b59f2ba970f979e4aa 525 Pfam PF01645 Conserved region in glutamate synthase 119 493 3.7E-99 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 RK98_RS07720 fff4079f0a04f8b59f2ba970f979e4aa 525 SUPERFAMILY SSF51395 165 522 1.9E-106 T 28-03-2018 RK98_RS07720 fff4079f0a04f8b59f2ba970f979e4aa 525 SUPERFAMILY SSF51395 12 128 1.9E-106 T 28-03-2018 RK98_RS07720 fff4079f0a04f8b59f2ba970f979e4aa 525 Gene3D G3DSA:3.20.20.70 91 525 8.9E-88 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS07225 c37376b595ee7f52d9351a34316f704d 56 Pfam PF12669 Virus attachment protein p12 family 5 43 6.7E-9 T 28-03-2018 RK98_RS02875 e6153592867b32f9fb377e101d1a969e 100 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 35 86 7.3E-13 T 28-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 RK98_RS02875 e6153592867b32f9fb377e101d1a969e 100 PIRSF PIRSF028784 2 96 1.3E-26 T 28-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 RK98_RS04975 b8172f0def5bed60c8c2139c3cb79624 579 SUPERFAMILY SSF55781 240 366 2.7E-6 T 28-03-2018 IPR029016 GAF domain-like RK98_RS04975 b8172f0def5bed60c8c2139c3cb79624 579 SMART SM00387 466 575 1.2E-6 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS04975 b8172f0def5bed60c8c2139c3cb79624 579 SUPERFAMILY SSF55874 429 572 4.85E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS04975 b8172f0def5bed60c8c2139c3cb79624 579 SMART SM00065 233 368 0.0037 T 28-03-2018 IPR003018 GAF domain GO:0005515 RK98_RS04975 b8172f0def5bed60c8c2139c3cb79624 579 Gene3D G3DSA:3.30.565.10 389 574 8.0E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS04975 b8172f0def5bed60c8c2139c3cb79624 579 Pfam PF06580 Histidine kinase 373 452 2.1E-22 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 RK98_RS04975 b8172f0def5bed60c8c2139c3cb79624 579 Pfam PF07694 5TMR of 5TMR-LYT 21 201 6.1E-52 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 RK98_RS04975 b8172f0def5bed60c8c2139c3cb79624 579 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 574 2.6E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain RK98_RS04975 b8172f0def5bed60c8c2139c3cb79624 579 Gene3D G3DSA:3.30.450.40 207 383 6.6E-6 T 28-03-2018 IPR029016 GAF domain-like RK98_RS12640 5fd30a3a51bc870f699631d955c20721 414 Pfam PF02388 FemAB family 6 413 3.1E-146 T 28-03-2018 IPR003447 FemABX peptidyl transferase GO:0016755|GO:0044038 RK98_RS12640 5fd30a3a51bc870f699631d955c20721 414 SUPERFAMILY SSF55729 166 244 1.52E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS12640 5fd30a3a51bc870f699631d955c20721 414 SUPERFAMILY SSF55729 310 408 1.52E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS12640 5fd30a3a51bc870f699631d955c20721 414 Gene3D G3DSA:3.40.630.30 168 389 7.7E-34 T 28-03-2018 RK98_RS12640 5fd30a3a51bc870f699631d955c20721 414 Gene3D G3DSA:3.40.630.30 1 167 5.1E-27 T 28-03-2018 RK98_RS12640 5fd30a3a51bc870f699631d955c20721 414 SUPERFAMILY SSF46589 244 307 4.6E-11 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 RK98_RS12640 5fd30a3a51bc870f699631d955c20721 414 SUPERFAMILY SSF55729 1 164 1.85E-50 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS12125 cb91fe7f92d414524b74db3d2bc3bd3e 109 Pfam PF12199 Extracellular fibrinogen binding protein C terminal 45 109 1.2E-37 T 28-03-2018 IPR021033 Extracellular fibrinogen binding protein, C-terminal GO:0001848|GO:0005615 RK98_RS12125 cb91fe7f92d414524b74db3d2bc3bd3e 109 SUPERFAMILY SSF158366 50 109 1.31E-29 T 28-03-2018 IPR021033 Extracellular fibrinogen binding protein, C-terminal GO:0001848|GO:0005615 RK98_RS02500 94a15378a09cf07f95399e8812cb127d 306 PIRSF PIRSF000535 1 303 1.5E-86 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RK98_RS02500 94a15378a09cf07f95399e8812cb127d 306 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 300 3.2E-106 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 RK98_RS02500 94a15378a09cf07f95399e8812cb127d 306 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 1.5E-106 T 28-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 RK98_RS02500 94a15378a09cf07f95399e8812cb127d 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 RK98_RS02500 94a15378a09cf07f95399e8812cb127d 306 Gene3D G3DSA:2.20.150.10 9 42 1.4E-14 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain RK98_RS02500 94a15378a09cf07f95399e8812cb127d 306 Pfam PF00294 pfkB family carbohydrate kinase 11 280 4.0E-51 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB RK98_RS02500 94a15378a09cf07f95399e8812cb127d 306 SUPERFAMILY SSF53613 1 280 1.26E-63 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS02500 94a15378a09cf07f95399e8812cb127d 306 Gene3D G3DSA:3.40.1190.20 43 304 3.5E-41 T 28-03-2018 IPR029056 Ribokinase-like RK98_RS09595 3470315a1bd96bd7e92363b0ca7baae5 286 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RK98_RS09595 3470315a1bd96bd7e92363b0ca7baae5 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 2.7E-114 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RK98_RS09595 3470315a1bd96bd7e92363b0ca7baae5 286 Gene3D G3DSA:3.20.20.70 1 286 1.0E-105 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS09595 3470315a1bd96bd7e92363b0ca7baae5 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 5.6E-102 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RK98_RS09595 3470315a1bd96bd7e92363b0ca7baae5 286 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 7.2E-129 T 28-03-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 RK98_RS09595 3470315a1bd96bd7e92363b0ca7baae5 286 PIRSF PIRSF001359 1 285 2.3E-127 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 RK98_RS09595 3470315a1bd96bd7e92363b0ca7baae5 286 SUPERFAMILY SSF51569 1 285 1.76E-104 T 28-03-2018 RK98_RS07320 8adc74f541a6bd474bba72158f6693aa 299 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 293 1.1E-112 T 28-03-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 RK98_RS07320 8adc74f541a6bd474bba72158f6693aa 299 Gene3D G3DSA:1.10.4100.10 72 263 3.0E-26 T 28-03-2018 RK98_RS07320 8adc74f541a6bd474bba72158f6693aa 299 Pfam PF03313 Serine dehydratase alpha chain 14 276 1.4E-70 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit RK98_RS05740 0852123aebe6f6a0542ab17f9409b8ae 332 Pfam PF01032 FecCD transport family 20 327 2.9E-82 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 RK98_RS05740 0852123aebe6f6a0542ab17f9409b8ae 332 Gene3D G3DSA:1.10.3470.10 4 331 7.7E-60 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS05740 0852123aebe6f6a0542ab17f9409b8ae 332 SUPERFAMILY SSF81345 10 327 1.96E-73 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS11075 6cae98720ceb49f07860fba8c97cfd57 375 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 340 1.2E-71 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 RK98_RS11075 6cae98720ceb49f07860fba8c97cfd57 375 SUPERFAMILY SSF51395 1 360 1.95E-86 T 28-03-2018 RK98_RS11075 6cae98720ceb49f07860fba8c97cfd57 375 Gene3D G3DSA:3.20.20.70 1 354 1.0E-86 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS04120 402e7f13767b410b23172ff395481fc0 729 Pfam PF13175 AAA ATPase domain 1 393 3.3E-34 T 28-03-2018 RK98_RS04120 402e7f13767b410b23172ff395481fc0 729 Gene3D G3DSA:3.40.50.300 1 467 6.1E-24 T 28-03-2018 RK98_RS04120 402e7f13767b410b23172ff395481fc0 729 SUPERFAMILY SSF52540 229 410 2.78E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS04120 402e7f13767b410b23172ff395481fc0 729 SUPERFAMILY SSF52540 1 179 2.78E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS08190 3dd8f173ed24bc1949e2df453b241312 140 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 8 91 4.1E-15 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 RK98_RS08190 3dd8f173ed24bc1949e2df453b241312 140 Gene3D G3DSA:2.30.110.10 2 137 6.6E-20 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 RK98_RS08190 3dd8f173ed24bc1949e2df453b241312 140 SUPERFAMILY SSF50475 7 128 9.91E-24 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 12 370 5.0E-138 T 28-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 SUPERFAMILY SSF54631 248 368 1.67E-25 T 28-03-2018 RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 Pfam PF00005 ABC transporter 19 163 5.8E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 Gene3D G3DSA:3.10.580.10 240 372 3.6E-26 T 28-03-2018 RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 Pfam PF00571 CBS domain 253 300 3.8E-8 T 28-03-2018 IPR000644 CBS domain RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 Pfam PF00571 CBS domain 314 362 1.6E-6 T 28-03-2018 IPR000644 CBS domain RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 SUPERFAMILY SSF52540 1 241 6.06E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 Gene3D G3DSA:3.40.50.300 1 239 4.4E-77 T 28-03-2018 RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 SMART SM00382 27 213 1.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 SMART SM00116 317 365 3.4E-5 T 28-03-2018 IPR000644 CBS domain RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 SMART SM00116 257 305 2.3E-6 T 28-03-2018 IPR000644 CBS domain RK98_RS07795 2782ba301813895dabae6d8a09e99c03 408 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS09245 d0ed52d49d64706b1117f43ee0627492 520 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 9 491 3.0E-188 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RK98_RS09245 d0ed52d49d64706b1117f43ee0627492 520 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 47 491 3.3E-159 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 RK98_RS09245 d0ed52d49d64706b1117f43ee0627492 520 ProSitePatterns PS01303 BCCT family of transporters signature. 312 321 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 RK98_RS10000 1d440e2a105dcb09e2ffbac6b3ed4c6d 509 SUPERFAMILY SSF110921 404 495 1.83E-16 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RK98_RS10000 1d440e2a105dcb09e2ffbac6b3ed4c6d 509 Gene3D G3DSA:3.20.20.70 1 328 9.1E-105 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS10000 1d440e2a105dcb09e2ffbac6b3ed4c6d 509 Pfam PF00682 HMGL-like 5 273 5.6E-93 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 RK98_RS10000 1d440e2a105dcb09e2ffbac6b3ed4c6d 509 SUPERFAMILY SSF51569 1 291 2.2E-92 T 28-03-2018 RK98_RS10000 1d440e2a105dcb09e2ffbac6b3ed4c6d 509 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 40.347 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RK98_RS10000 1d440e2a105dcb09e2ffbac6b3ed4c6d 509 Pfam PF08502 LeuA allosteric (dimerisation) domain 370 499 1.8E-35 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RK98_RS10000 1d440e2a105dcb09e2ffbac6b3ed4c6d 509 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 495 6.7E-200 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RK98_RS10000 1d440e2a105dcb09e2ffbac6b3ed4c6d 509 SMART SM00917 369 500 4.7E-31 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 RK98_RS06570 d74d9ab65957c75216e6922eca0caf42 412 SUPERFAMILY SSF53448 48 315 3.13E-58 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS06570 d74d9ab65957c75216e6922eca0caf42 412 TIGRFAM TIGR03937 PgaC_IcaA: poly-beta-1,6 N-acetyl-D-glucosamine synthase 3 408 4.9E-191 T 28-03-2018 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA GO:0008375|GO:0042710 RK98_RS06570 d74d9ab65957c75216e6922eca0caf42 412 Gene3D G3DSA:3.90.550.10 26 300 7.7E-55 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS06570 d74d9ab65957c75216e6922eca0caf42 412 Pfam PF00535 Glycosyl transferase family 2 53 215 4.7E-30 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RK98_RS06680 cdc206d272d069188e27e8870430d604 619 Gene3D G3DSA:1.10.530.10 317 472 3.5E-37 T 28-03-2018 RK98_RS06680 cdc206d272d069188e27e8870430d604 619 SUPERFAMILY SSF54001 507 596 1.77E-19 T 28-03-2018 RK98_RS06680 cdc206d272d069188e27e8870430d604 619 Pfam PF05257 CHAP domain 506 593 8.3E-18 T 28-03-2018 IPR007921 CHAP domain RK98_RS06680 cdc206d272d069188e27e8870430d604 619 SMART SM00047 313 472 4.9E-48 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RK98_RS06680 cdc206d272d069188e27e8870430d604 619 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 330 468 4.0E-21 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 RK98_RS03360 0c80ff62183dff23875b0cf11d808ea7 60 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 2.5E-18 T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS03360 0c80ff62183dff23875b0cf11d808ea7 60 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 12.776 T 28-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS03360 0c80ff62183dff23875b0cf11d808ea7 60 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 6 60 2.2E-22 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 RK98_RS03360 0c80ff62183dff23875b0cf11d808ea7 60 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 RK98_RS03360 0c80ff62183dff23875b0cf11d808ea7 60 Gene3D G3DSA:1.20.5.1030 6 54 2.0E-18 T 28-03-2018 RK98_RS06785 7b46c1910d2093949f5f83b7497c57bf 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 3.7E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS06785 7b46c1910d2093949f5f83b7497c57bf 221 SMART SM00862 146 221 8.5E-14 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 RK98_RS06785 7b46c1910d2093949f5f83b7497c57bf 221 Gene3D G3DSA:1.10.10.10 127 221 8.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS06785 7b46c1910d2093949f5f83b7497c57bf 221 Gene3D G3DSA:3.40.50.2300 1 126 3.6E-30 T 28-03-2018 RK98_RS06785 7b46c1910d2093949f5f83b7497c57bf 221 Pfam PF00072 Response regulator receiver domain 3 111 2.0E-23 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS06785 7b46c1910d2093949f5f83b7497c57bf 221 SMART SM00448 1 111 1.1E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 RK98_RS06785 7b46c1910d2093949f5f83b7497c57bf 221 SUPERFAMILY SSF52172 1 167 9.67E-33 T 28-03-2018 IPR011006 CheY-like superfamily RK98_RS11510 707b62e28911f7877aa7162e7c26d4a7 312 Pfam PF01040 UbiA prenyltransferase family 27 276 1.0E-36 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 RK98_RS11510 707b62e28911f7877aa7162e7c26d4a7 312 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 10 303 18.84 T 28-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 RK98_RS11510 707b62e28911f7877aa7162e7c26d4a7 312 PIRSF PIRSF005355 2 308 1.9E-78 T 28-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 RK98_RS08240 21d82e3c14971a1d57925709b517ff56 143 Pfam PF11070 Protein of unknown function (DUF2871) 1 130 1.2E-46 T 28-03-2018 IPR021299 Protein of unknown function DUF2871 RK98_RS08240 21d82e3c14971a1d57925709b517ff56 143 Gene3D G3DSA:1.20.210.10 1 142 1.0E-10 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 RK98_RS04225 a33b38212a5756aff0716c0a8b9bdce1 117 Pfam PF01381 Helix-turn-helix 17 71 4.4E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS04225 a33b38212a5756aff0716c0a8b9bdce1 117 SUPERFAMILY SSF47413 10 76 2.39E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 RK98_RS04225 a33b38212a5756aff0716c0a8b9bdce1 117 Gene3D G3DSA:1.10.260.40 1 76 2.3E-16 T 28-03-2018 RK98_RS04225 a33b38212a5756aff0716c0a8b9bdce1 117 SMART SM00530 16 71 2.2E-10 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 RK98_RS12245 009de146c05104e365a8423ea576898c 62 Gene3D G3DSA:1.10.10.60 1 52 5.6E-6 T 28-03-2018 RK98_RS05805 f26f1941cd59a359a30dca5422055f37 255 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 251 1.4E-127 T 28-03-2018 IPR007595 Csa1 family RK98_RS05805 f26f1941cd59a359a30dca5422055f37 255 Pfam PF04507 Csa1 family 1 253 5.3E-126 T 28-03-2018 IPR007595 Csa1 family RK98_RS10735 6df0448657903738654266531b243eb8 110 Pfam PF05135 Phage gp6-like head-tail connector protein 1 95 4.5E-18 T 28-03-2018 IPR021146 Phage gp6-like head-tail connector protein RK98_RS04620 474cb189391ad5dc5477674ea3bb151e 266 Gene3D G3DSA:3.40.220.10 16 264 5.7E-62 T 28-03-2018 RK98_RS04620 474cb189391ad5dc5477674ea3bb151e 266 SUPERFAMILY SSF52949 81 263 6.06E-55 T 28-03-2018 RK98_RS04620 474cb189391ad5dc5477674ea3bb151e 266 Pfam PF01661 Macro domain 103 227 2.9E-34 T 28-03-2018 IPR002589 Macro domain RK98_RS04620 474cb189391ad5dc5477674ea3bb151e 266 SMART SM00506 86 227 2.2E-26 T 28-03-2018 IPR002589 Macro domain RK98_RS07165 c7423c192be919390af6b99b3ecd66bc 384 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 230 243 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 RK98_RS07165 c7423c192be919390af6b99b3ecd66bc 384 Gene3D G3DSA:3.90.1150.10 281 381 1.3E-23 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 RK98_RS07165 c7423c192be919390af6b99b3ecd66bc 384 Gene3D G3DSA:3.40.640.10 66 280 3.4E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 RK98_RS07165 c7423c192be919390af6b99b3ecd66bc 384 Pfam PF00155 Aminotransferase class I and II 29 375 7.3E-61 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 RK98_RS07165 c7423c192be919390af6b99b3ecd66bc 384 SUPERFAMILY SSF53383 1 379 1.9E-90 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase RK98_RS09580 6152823e779112527f549f68aaaa497c 176 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 15 81 5.7E-9 T 28-03-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 RK98_RS09580 6152823e779112527f549f68aaaa497c 176 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 13 93 6.3E-31 T 28-03-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 RK98_RS09580 6152823e779112527f549f68aaaa497c 176 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 173 15.623 T 28-03-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 RK98_RS10815 e74b25e6315ca0a9de759910dc377b82 412 Pfam PF10651 Domain of unknown function (DUF2479) 4 143 3.6E-32 T 28-03-2018 IPR018913 Domain of unknown function DUF2479 RK98_RS10815 e74b25e6315ca0a9de759910dc377b82 412 Pfam PF12789 Phage tail repeat like 327 356 2.1E-7 T 28-03-2018 RK98_RS13965 81915c20177338b29aa711a24fa41429 301 Pfam PF07901 Protein of unknown function (DUF1672) 34 296 4.0E-121 T 28-03-2018 IPR012873 Protein of unknown function DUF1672 RK98_RS13965 81915c20177338b29aa711a24fa41429 301 Gene3D G3DSA:3.40.190.10 7 277 4.1E-4 T 28-03-2018 RK98_RS11200 b07fd470ed75600272773fe425d9e752 61 Pfam PF11151 Protein of unknown function (DUF2929) 1 56 8.9E-19 T 28-03-2018 IPR021324 Protein of unknown function DUF2929 RK98_RS07430 955eeb3eb4cb022603e4b98f210a864f 203 Pfam PF09335 SNARE associated Golgi protein 30 160 4.1E-22 T 28-03-2018 IPR032816 SNARE associated Golgi protein RK98_RS11025 574472b8026f0f59a49e14c3eb4b017c 118 Pfam PF03334 Na+/H+ antiporter subunit 13 94 3.1E-25 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 RK98_RS11025 574472b8026f0f59a49e14c3eb4b017c 118 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 108 1.2E-25 T 28-03-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 RK98_RS03385 6b604486580e2d03a55cfc53c6eff55e 134 PIRSF PIRSF005520 1 134 5.1E-51 T 28-03-2018 IPR008226 Mini-ribonuclease 3 family RK98_RS03385 6b604486580e2d03a55cfc53c6eff55e 134 SUPERFAMILY SSF69065 8 131 3.49E-41 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RK98_RS03385 6b604486580e2d03a55cfc53c6eff55e 134 Pfam PF00636 Ribonuclease III domain 16 115 3.8E-18 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RK98_RS03385 6b604486580e2d03a55cfc53c6eff55e 134 SMART SM00535 3 133 8.2E-4 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RK98_RS03385 6b604486580e2d03a55cfc53c6eff55e 134 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 6 132 28.287 T 28-03-2018 IPR008226 Mini-ribonuclease 3 family RK98_RS03385 6b604486580e2d03a55cfc53c6eff55e 134 Gene3D G3DSA:1.10.1520.10 3 134 1.0E-21 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 RK98_RS02935 89d6ff859b788f8e4cb8ac75d4e6396e 238 SUPERFAMILY SSF103473 69 231 1.44E-5 T 28-03-2018 IPR020846 Major facilitator superfamily domain RK98_RS08505 4f05bbf0678ada340366e181948673d4 168 Gene3D G3DSA:3.30.530.20 1 168 1.5E-16 T 28-03-2018 IPR023393 START-like domain RK98_RS08505 4f05bbf0678ada340366e181948673d4 168 SUPERFAMILY SSF55961 6 164 3.18E-35 T 28-03-2018 RK98_RS08505 4f05bbf0678ada340366e181948673d4 168 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 21 162 1.6E-26 T 28-03-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 RK98_RS07125 b679f9d1592e17f63d8c36ed970388b0 162 Pfam PF13673 Acetyltransferase (GNAT) domain 41 138 9.0E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS07125 b679f9d1592e17f63d8c36ed970388b0 162 SUPERFAMILY SSF55729 1 141 6.81E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS07125 b679f9d1592e17f63d8c36ed970388b0 162 Gene3D G3DSA:3.40.630.30 1 162 2.5E-24 T 28-03-2018 RK98_RS05655 85a60f4e1111e2e087206c78c7cd5d62 230 Pfam PF02397 Bacterial sugar transferase 45 224 1.2E-61 T 28-03-2018 IPR003362 Bacterial sugar transferase RK98_RS06995 d34bb382b9df8fdcdd7452d474cc8538 195 Gene3D G3DSA:1.10.10.60 49 141 1.8E-6 T 28-03-2018 RK98_RS06995 d34bb382b9df8fdcdd7452d474cc8538 195 SUPERFAMILY SSF46689 5 72 3.29E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 RK98_RS06995 d34bb382b9df8fdcdd7452d474cc8538 195 Pfam PF14278 Transcriptional regulator C-terminal region 90 165 3.4E-10 T 28-03-2018 RK98_RS06995 d34bb382b9df8fdcdd7452d474cc8538 195 Gene3D G3DSA:1.10.10.60 6 48 2.0E-11 T 28-03-2018 RK98_RS06995 d34bb382b9df8fdcdd7452d474cc8538 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 59 2.8E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 RK98_RS05950 a96a72235f41c345f77eaa71df8ff9ce 185 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 185 29.888 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RK98_RS05950 a96a72235f41c345f77eaa71df8ff9ce 185 PIRSF PIRSF001296 1 185 1.1E-67 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RK98_RS05950 a96a72235f41c345f77eaa71df8ff9ce 185 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 4 185 8.4E-53 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RK98_RS05950 a96a72235f41c345f77eaa71df8ff9ce 185 Pfam PF02669 K+-transporting ATPase, c chain 5 184 1.5E-62 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 RK98_RS10435 27054444719c68250c0981f36b7ffcb0 98 SUPERFAMILY SSF52833 14 97 2.71E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS10435 27054444719c68250c0981f36b7ffcb0 98 Pfam PF00085 Thioredoxin 15 97 1.9E-8 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 RK98_RS10435 27054444719c68250c0981f36b7ffcb0 98 Gene3D G3DSA:3.40.30.10 1 98 5.7E-10 T 28-03-2018 RK98_RS03200 d304226b881479a496af0a4655cb9498 496 Pfam PF00534 Glycosyl transferases group 1 317 471 1.0E-31 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 RK98_RS03200 d304226b881479a496af0a4655cb9498 496 Gene3D G3DSA:3.40.50.2000 308 480 3.1E-30 T 28-03-2018 RK98_RS03200 d304226b881479a496af0a4655cb9498 496 SUPERFAMILY SSF53756 195 492 2.88E-45 T 28-03-2018 RK98_RS09275 654ef38cb50f20ece0444819ca4aa5a7 585 Pfam PF06276 Ferric iron reductase FhuF-like transporter 413 569 3.8E-27 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain RK98_RS09275 654ef38cb50f20ece0444819ca4aa5a7 585 Pfam PF04183 IucA / IucC family 158 384 2.5E-51 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 RK98_RS12260 4e03a649e8344d37e14f2b4a4b644d79 44 Pfam PF05480 Staphylococcus haemolytic protein 1 43 2.1E-24 T 28-03-2018 IPR008846 Staphylococcal hemolytic protein family GO:0009405 RK98_RS06130 7a7c52cd13fd6f6e7ee9ffdf0f635fe1 247 Gene3D G3DSA:3.20.20.190 1 247 2.4E-62 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS06130 7a7c52cd13fd6f6e7ee9ffdf0f635fe1 247 SUPERFAMILY SSF51695 3 244 4.19E-62 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 RK98_RS06130 7a7c52cd13fd6f6e7ee9ffdf0f635fe1 247 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 240 2.8E-44 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 RK98_RS06450 58510b350a96e4a5c5126e5a4514e7c4 318 SMART SM00450 113 214 4.6E-20 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06450 58510b350a96e4a5c5126e5a4514e7c4 318 SUPERFAMILY SSF52821 86 246 3.93E-35 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06450 58510b350a96e4a5c5126e5a4514e7c4 318 Pfam PF00581 Rhodanese-like domain 115 208 3.5E-11 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06450 58510b350a96e4a5c5126e5a4514e7c4 318 Gene3D G3DSA:3.40.250.10 107 311 1.1E-25 T 28-03-2018 IPR001763 Rhodanese-like domain RK98_RS06450 58510b350a96e4a5c5126e5a4514e7c4 318 Pfam PF12368 Rhodanase C-terminal 220 285 1.0E-15 T 28-03-2018 IPR022111 Rhodanase, C-terminal RK98_RS06450 58510b350a96e4a5c5126e5a4514e7c4 318 Hamap MF_00469 UPF0176 protein YceA [yceA]. 1 265 39.197 T 28-03-2018 IPR020936 Uncharacterised protein family UPF0176 RK98_RS07035 7fefbad4fb08fd50eace439f2e7797db 98 Pfam PF13780 Domain of unknown function (DUF4176) 4 75 5.4E-24 T 28-03-2018 IPR025233 Protein of unknown function DUF4176 RK98_RS01590 82ebb57484878324b0bb3d0cd42a4dad 84 Pfam PF04531 Bacteriophage holin 2 81 4.5E-29 T 28-03-2018 IPR006485 Bacteriophage holin RK98_RS01590 82ebb57484878324b0bb3d0cd42a4dad 84 TIGRFAM TIGR01598 holin_phiLC3: holin, phage phi LC3 family 2 80 2.6E-25 T 28-03-2018 IPR006485 Bacteriophage holin RK98_RS10800 2cb4031948b673f8ad63d4dfac999bdf 57 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 8 47 2.7E-15 T 28-03-2018 IPR010022 Protein of unknown function XkdX RK98_RS10800 2cb4031948b673f8ad63d4dfac999bdf 57 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 3 47 2.2E-25 T 28-03-2018 IPR010022 Protein of unknown function XkdX RK98_RS09410 cf0b0f3708ae6286a7582d29ba413089 310 Pfam PF07949 YbbR-like protein 47 127 5.4E-8 T 28-03-2018 IPR012505 YbbR-like RK98_RS09410 cf0b0f3708ae6286a7582d29ba413089 310 Pfam PF07949 YbbR-like protein 229 307 3.1E-13 T 28-03-2018 IPR012505 YbbR-like RK98_RS09410 cf0b0f3708ae6286a7582d29ba413089 310 Pfam PF07949 YbbR-like protein 143 220 9.7E-6 T 28-03-2018 IPR012505 YbbR-like RK98_RS11595 73031b797ba8847c314bb198827dc861 397 Gene3D G3DSA:3.40.710.10 77 389 1.8E-57 T 28-03-2018 RK98_RS11595 73031b797ba8847c314bb198827dc861 397 SUPERFAMILY SSF56601 77 377 2.0E-66 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like RK98_RS11595 73031b797ba8847c314bb198827dc861 397 Pfam PF00144 Beta-lactamase 88 383 6.1E-62 T 28-03-2018 IPR001466 Beta-lactamase-related RK98_RS03025 18d5f4b63551bb5656e416e30b68c132 206 TIGRFAM TIGR01218 Gpos_tandem_5TM: tandem five-TM protein 6 206 1.2E-47 T 28-03-2018 IPR005915 Tandem five-TM protein RK98_RS03025 18d5f4b63551bb5656e416e30b68c132 206 Pfam PF04276 Protein of unknown function (DUF443) 11 205 3.2E-60 T 28-03-2018 IPR005915 Tandem five-TM protein RK98_RS10485 fcc0ad3f21e7dd27715711dd25a67ac6 465 SUPERFAMILY SSF101960 32 462 2.75E-142 T 28-03-2018 RK98_RS10485 fcc0ad3f21e7dd27715711dd25a67ac6 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 1.3E-74 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 RK98_RS10485 fcc0ad3f21e7dd27715711dd25a67ac6 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 7.2E-232 T 28-03-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 RK98_RS02555 11c07062806ebea7b3cd878f79de9dbc 302 PRINTS PR00069 Aldo-keto reductase signature 112 130 3.0E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS02555 11c07062806ebea7b3cd878f79de9dbc 302 PRINTS PR00069 Aldo-keto reductase signature 143 160 3.0E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 RK98_RS02555 11c07062806ebea7b3cd878f79de9dbc 302 SUPERFAMILY SSF51430 7 296 3.14E-68 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS02555 11c07062806ebea7b3cd878f79de9dbc 302 Gene3D G3DSA:3.20.20.100 1 297 1.5E-62 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS02555 11c07062806ebea7b3cd878f79de9dbc 302 Pfam PF00248 Aldo/keto reductase family 15 292 1.8E-56 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain RK98_RS08420 be2deccf9636eab784a739e4487ec1a6 299 SMART SM00382 27 220 6.8E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS08420 be2deccf9636eab784a739e4487ec1a6 299 Gene3D G3DSA:3.40.50.300 2 268 1.2E-60 T 28-03-2018 RK98_RS08420 be2deccf9636eab784a739e4487ec1a6 299 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS08420 be2deccf9636eab784a739e4487ec1a6 299 Pfam PF00005 ABC transporter 19 158 2.3E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS08420 be2deccf9636eab784a739e4487ec1a6 299 Pfam PF13732 Domain of unknown function (DUF4162) 212 294 5.5E-15 T 28-03-2018 IPR025302 Domain of unknown function DUF4162 RK98_RS08420 be2deccf9636eab784a739e4487ec1a6 299 SUPERFAMILY SSF52540 3 222 3.63E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14310 a228d0a7d3a4441a6921144418c5a457 287 Gene3D G3DSA:1.10.3470.10 3 278 3.2E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS14310 a228d0a7d3a4441a6921144418c5a457 287 SUPERFAMILY SSF81345 4 267 1.7E-34 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS14310 a228d0a7d3a4441a6921144418c5a457 287 Pfam PF00950 ABC 3 transport family 8 270 3.3E-56 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 RK98_RS10375 fec2cc0ae7e6f4e37e2dffcfe8dc8e2f 205 Pfam PF01810 LysE type translocator 15 197 6.0E-27 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 RK98_RS13365 80300836ea535fb71c33a5713edf1d5b 157 Pfam PF04434 SWIM zinc finger 47 82 4.7E-6 T 28-03-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 RK98_RS10300 909a46235803fc37452a97d7c43f3845 176 Gene3D G3DSA:3.40.630.30 1 161 4.7E-16 T 28-03-2018 RK98_RS10300 909a46235803fc37452a97d7c43f3845 176 Pfam PF00583 Acetyltransferase (GNAT) family 29 119 2.0E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 RK98_RS10300 909a46235803fc37452a97d7c43f3845 176 SUPERFAMILY SSF55729 1 139 1.21E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase RK98_RS00475 a2792f7686b5bc0caee2abe4a43564d3 121 TIGRFAM TIGR00494 crcB: protein CrcB 5 115 1.3E-24 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RK98_RS00475 a2792f7686b5bc0caee2abe4a43564d3 121 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 118 18.81 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RK98_RS00475 a2792f7686b5bc0caee2abe4a43564d3 121 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 113 2.1E-26 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 RK98_RS11585 e34afe705d670574eb646d7a695b1de3 156 Pfam PF10804 Protein of unknown function (DUF2538) 1 155 5.1E-96 T 28-03-2018 IPR024469 Protein of unknown function DUF2538 RK98_RS11585 e34afe705d670574eb646d7a695b1de3 156 ProDom PD034207 SA0907 SIMILAR ORF2 TRANSCRIPTIONAL AUTOLYSIN SAV1055 MW0938 ATLR CDS REGULATOR 1 156 2.0E-89 T 28-03-2018 IPR024469 Protein of unknown function DUF2538 RK98_RS12335 a7df66bcff7e45208d180c981cf23801 187 Hamap MF_01197 Cell division protein SepF [sepF]. 4 179 19.642 T 28-03-2018 IPR023052 Cell division protein SepF GO:0090529 RK98_RS12335 a7df66bcff7e45208d180c981cf23801 187 Pfam PF04472 Cell division protein SepF 101 171 4.0E-28 T 28-03-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 RK98_RS07560 706032b281289a8ecfacb5de6ea9c515 257 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 3 255 8.8E-104 T 28-03-2018 IPR007595 Csa1 family RK98_RS07560 706032b281289a8ecfacb5de6ea9c515 257 Pfam PF04507 Csa1 family 1 257 3.3E-131 T 28-03-2018 IPR007595 Csa1 family RK98_RS12965 faaaf73a686dd5c92ab4e0c9ff450a0a 65 Gene3D G3DSA:1.10.260.40 3 63 3.0E-5 T 28-03-2018 RK98_RS13810 2c7db50ae1108a4ad6dff5d27254daf1 195 Pfam PF07187 Protein of unknown function (DUF1405) 27 184 1.0E-50 T 28-03-2018 IPR009845 Protein of unknown function DUF1405 RK98_RS02220 76abd2926b60a5106dc4a01faacea9d4 288 Gene3D G3DSA:3.40.50.10440 55 152 1.8E-30 T 28-03-2018 RK98_RS02220 76abd2926b60a5106dc4a01faacea9d4 288 Gene3D G3DSA:3.40.50.10440 1 30 8.6E-4 T 28-03-2018 RK98_RS02220 76abd2926b60a5106dc4a01faacea9d4 288 Gene3D G3DSA:3.30.1180.10 153 287 4.4E-34 T 28-03-2018 RK98_RS02220 76abd2926b60a5106dc4a01faacea9d4 288 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 281 1.3E-81 T 28-03-2018 IPR003797 DegV RK98_RS02220 76abd2926b60a5106dc4a01faacea9d4 288 Gene3D G3DSA:2.20.28.50 31 54 1.2E-11 T 28-03-2018 RK98_RS02220 76abd2926b60a5106dc4a01faacea9d4 288 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 280 1.9E-96 T 28-03-2018 IPR003797 DegV RK98_RS02220 76abd2926b60a5106dc4a01faacea9d4 288 SUPERFAMILY SSF82549 1 282 1.02E-86 T 28-03-2018 RK98_RS08580 f29802d599216ad0083095c00668c8fe 307 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 82 227 3.0E-44 T 28-03-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RK98_RS08580 f29802d599216ad0083095c00668c8fe 307 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 82 227 4.7E-49 T 28-03-2018 IPR004474 Cell envelope-related transcriptional attenuator domain RK98_RS06165 c554be7b1899957272e90d894135fc28 257 Pfam PF01446 Replication protein 93 257 8.1E-54 T 28-03-2018 IPR000989 Replication protein GO:0003677|GO:0005727|GO:0006260 RK98_RS04985 24b4fb94511f361f409777fbd379f06c 573 Pfam PF00535 Glycosyl transferase family 2 5 136 4.1E-32 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 RK98_RS04985 24b4fb94511f361f409777fbd379f06c 573 SUPERFAMILY SSF53448 3 214 1.18E-47 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS04985 24b4fb94511f361f409777fbd379f06c 573 Gene3D G3DSA:3.90.550.10 2 299 6.2E-46 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases RK98_RS02845 93c2536bf5699a8f06d443971f4305e2 278 Gene3D G3DSA:1.10.3470.10 3 274 7.4E-32 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like RK98_RS02845 93c2536bf5699a8f06d443971f4305e2 278 Pfam PF00950 ABC 3 transport family 11 265 1.6E-77 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 RK98_RS02845 93c2536bf5699a8f06d443971f4305e2 278 SUPERFAMILY SSF81345 4 263 1.27E-43 T 28-03-2018 IPR029022 ABC transporter, BtuC-like RK98_RS00300 a195b29a07a419f2f60dd04b43c81c16 103 Pfam PF03413 Peptidase propeptide and YPEB domain 60 99 4.9E-8 T 28-03-2018 IPR025711 PepSY domain RK98_RS05895 70bfbb8b7608e7a9972d7c61bef9792d 251 Pfam PF01925 Sulfite exporter TauE/SafE 10 247 5.7E-41 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 RK98_RS06355 9acb6b92aa00c2643ba7b4c4562f62b6 279 Pfam PF02195 ParB-like nuclease domain 31 120 1.3E-25 T 28-03-2018 IPR003115 ParB/Sulfiredoxin RK98_RS06355 9acb6b92aa00c2643ba7b4c4562f62b6 279 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 29 278 1.1E-95 T 28-03-2018 IPR023705 Nucleoid occlusion protein RK98_RS06355 9acb6b92aa00c2643ba7b4c4562f62b6 279 SUPERFAMILY SSF110849 29 164 1.99E-32 T 28-03-2018 IPR003115 ParB/Sulfiredoxin RK98_RS06355 9acb6b92aa00c2643ba7b4c4562f62b6 279 Gene3D G3DSA:3.90.1530.10 18 120 7.6E-35 T 28-03-2018 RK98_RS06355 9acb6b92aa00c2643ba7b4c4562f62b6 279 Gene3D G3DSA:1.10.10.730 121 168 1.7E-20 T 28-03-2018 RK98_RS06355 9acb6b92aa00c2643ba7b4c4562f62b6 279 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 28 204 2.6E-55 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 RK98_RS06355 9acb6b92aa00c2643ba7b4c4562f62b6 279 SMART SM00470 30 120 1.7E-31 T 28-03-2018 IPR003115 ParB/Sulfiredoxin RK98_RS05285 92e413c064be5fbc02b2dc5e335561c7 154 Pfam PF01944 Stage II sporulation protein M 3 152 9.8E-16 T 28-03-2018 IPR002798 Stage II sporulation protein M-like RK98_RS05280 9954a8d6da1b33c1a59c9010ebb80004 240 SMART SM00382 27 207 4.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS05280 9954a8d6da1b33c1a59c9010ebb80004 240 Gene3D G3DSA:3.40.50.300 1 235 2.0E-50 T 28-03-2018 RK98_RS05280 9954a8d6da1b33c1a59c9010ebb80004 240 Pfam PF00005 ABC transporter 18 160 3.6E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS05280 9954a8d6da1b33c1a59c9010ebb80004 240 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS05280 9954a8d6da1b33c1a59c9010ebb80004 240 SUPERFAMILY SSF52540 2 210 2.2E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS03435 500402e29deb173b2e09dc1a727e36bd 153 PIRSF PIRSF010607 1 153 1.9E-65 T 28-03-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 RK98_RS03435 500402e29deb173b2e09dc1a727e36bd 153 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 148 1.0E-55 T 28-03-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 RK98_RS03165 566b253cd94a3f1c2ac0023e5ed94193 215 SUPERFAMILY SSF56784 5 215 2.89E-52 T 28-03-2018 IPR023214 HAD-like domain RK98_RS03165 566b253cd94a3f1c2ac0023e5ed94193 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 180 4.3E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 RK98_RS03165 566b253cd94a3f1c2ac0023e5ed94193 215 Gene3D G3DSA:1.10.150.240 23 75 7.1E-12 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 RK98_RS03165 566b253cd94a3f1c2ac0023e5ed94193 215 Gene3D G3DSA:3.40.50.1000 76 215 7.9E-29 T 28-03-2018 IPR023214 HAD-like domain RK98_RS03165 566b253cd94a3f1c2ac0023e5ed94193 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 186 4.8E-44 T 28-03-2018 IPR023214 HAD-like domain RK98_RS09265 f70ffdef54551e0f7a13e38067287f71 658 Pfam PF04183 IucA / IucC family 193 434 2.1E-57 T 28-03-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 RK98_RS09265 f70ffdef54551e0f7a13e38067287f71 658 Pfam PF06276 Ferric iron reductase FhuF-like transporter 469 644 2.4E-30 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain RK98_RS01095 4a67ce2c199dd58dbe0033878694029f 151 PIRSF PIRSF000239 1 150 9.4E-26 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RK98_RS01095 4a67ce2c199dd58dbe0033878694029f 151 Pfam PF00578 AhpC/TSA family 5 130 1.2E-35 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 RK98_RS01095 4a67ce2c199dd58dbe0033878694029f 151 SUPERFAMILY SSF52833 1 150 4.19E-45 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS01095 4a67ce2c199dd58dbe0033878694029f 151 Gene3D G3DSA:3.40.30.10 1 150 8.7E-36 T 28-03-2018 RK98_RS15100 34da7434baa947da6306695f62333ff4 32 Pfam PF13955 Toxin Fst, type I toxin-antitoxin system 6 26 1.2E-10 T 28-03-2018 IPR025882 Toxin Fst RK98_RS11060 edc945c4672fe792cfa5711c1ce2463f 127 SUPERFAMILY SSF141251 2 119 2.62E-48 T 28-03-2018 RK98_RS11060 edc945c4672fe792cfa5711c1ce2463f 127 SMART SM01298 8 120 4.7E-72 T 28-03-2018 IPR014916 Kinase associated protein B RK98_RS11060 edc945c4672fe792cfa5711c1ce2463f 127 Pfam PF08810 Kinase associated protein B 8 118 2.0E-43 T 28-03-2018 IPR014916 Kinase associated protein B RK98_RS11925 edee5d677d006665e959dabeb919afd8 144 SUPERFAMILY SSF158622 6 125 8.89E-32 T 28-03-2018 IPR023378 YheA/YmcA-like domain RK98_RS11925 edee5d677d006665e959dabeb919afd8 144 Gene3D G3DSA:1.20.1500.10 8 117 3.6E-24 T 28-03-2018 IPR023378 YheA/YmcA-like domain RK98_RS11925 edee5d677d006665e959dabeb919afd8 144 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 115 1.2E-15 T 28-03-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA RK98_RS13530 43f92443b5d2fd36caad79556a62313f 628 SMART SM00327 433 624 4.6E-13 T 28-03-2018 IPR002035 von Willebrand factor, type A RK98_RS13530 43f92443b5d2fd36caad79556a62313f 628 Gene3D G3DSA:3.40.50.410 428 612 5.2E-13 T 28-03-2018 IPR002035 von Willebrand factor, type A RK98_RS13530 43f92443b5d2fd36caad79556a62313f 628 SUPERFAMILY SSF53300 436 622 6.23E-16 T 28-03-2018 IPR002035 von Willebrand factor, type A RK98_RS06275 898a8bcd2c024b195968fccade6ea0dc 231 Pfam PF03591 AzlC protein 16 156 1.4E-37 T 28-03-2018 IPR011606 Branched-chain amino acid transport, permease RK98_RS02885 44e73d6b42a9e4dd69282106224cf1cc 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 2.9E-12 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS02885 44e73d6b42a9e4dd69282106224cf1cc 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 2.9E-12 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS02885 44e73d6b42a9e4dd69282106224cf1cc 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 2.9E-12 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS02885 44e73d6b42a9e4dd69282106224cf1cc 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 2.9E-12 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS02885 44e73d6b42a9e4dd69282106224cf1cc 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 2.9E-12 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS02885 44e73d6b42a9e4dd69282106224cf1cc 498 Pfam PF00361 Proton-conducting membrane transporter 128 417 6.6E-56 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS13705 fa2c53db165e0bd62c0c7506a60f0f1d 446 Pfam PF03929 PepSY-associated TM region 10 389 1.2E-50 T 28-03-2018 IPR005625 PepSY-associated TM protein RK98_RS11755 d2a614ee37b5f3e389e8a0f843c15c87 339 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 327 4.7E-40 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 RK98_RS00430 5e08583b1628d8fc759225ad1595f1e6 430 PRINTS PR00758 Arsenical pump membrane protein signature 280 304 1.7E-114 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RK98_RS00430 5e08583b1628d8fc759225ad1595f1e6 430 PRINTS PR00758 Arsenical pump membrane protein signature 325 347 1.7E-114 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RK98_RS00430 5e08583b1628d8fc759225ad1595f1e6 430 PRINTS PR00758 Arsenical pump membrane protein signature 179 202 1.7E-114 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RK98_RS00430 5e08583b1628d8fc759225ad1595f1e6 430 PRINTS PR00758 Arsenical pump membrane protein signature 366 391 1.7E-114 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RK98_RS00430 5e08583b1628d8fc759225ad1595f1e6 430 PRINTS PR00758 Arsenical pump membrane protein signature 146 170 1.7E-114 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RK98_RS00430 5e08583b1628d8fc759225ad1595f1e6 430 PRINTS PR00758 Arsenical pump membrane protein signature 219 244 1.7E-114 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RK98_RS00430 5e08583b1628d8fc759225ad1595f1e6 430 PRINTS PR00758 Arsenical pump membrane protein signature 103 127 1.7E-114 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RK98_RS00430 5e08583b1628d8fc759225ad1595f1e6 430 PRINTS PR00758 Arsenical pump membrane protein signature 399 423 1.7E-114 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RK98_RS00430 5e08583b1628d8fc759225ad1595f1e6 430 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 5 429 4.8E-213 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RK98_RS00430 5e08583b1628d8fc759225ad1595f1e6 430 Pfam PF02040 Arsenical pump membrane protein 5 426 4.6E-189 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 RK98_RS08295 d16df78adc4cdc69db895b78622785bf 147 SMART SM00850 50 146 2.3E-25 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 RK98_RS08295 d16df78adc4cdc69db895b78622785bf 147 Pfam PF04397 LytTr DNA-binding domain 51 145 1.2E-21 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 RK98_RS08295 d16df78adc4cdc69db895b78622785bf 147 Gene3D G3DSA:2.40.50.40 40 109 3.1E-12 T 28-03-2018 RK98_RS14990 cca41895429fa8dbd41d3d366c70688d 306 SUPERFAMILY SSF52540 124 270 6.87E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS14990 cca41895429fa8dbd41d3d366c70688d 306 Pfam PF07319 Primosomal protein DnaI N-terminus 1 94 6.2E-27 T 28-03-2018 IPR009928 Primosomal DnaI, N-terminal RK98_RS14990 cca41895429fa8dbd41d3d366c70688d 306 Pfam PF01695 IstB-like ATP binding protein 156 239 4.3E-9 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 RK98_RS14990 cca41895429fa8dbd41d3d366c70688d 306 Gene3D G3DSA:3.40.50.300 104 296 3.1E-17 T 28-03-2018 RK98_RS00915 858a28bb92a882cb66c38edfe8944ebd 242 SUPERFAMILY SSF52540 3 237 7.69E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS00915 858a28bb92a882cb66c38edfe8944ebd 242 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS00915 858a28bb92a882cb66c38edfe8944ebd 242 PIRSF PIRSF039085 1 242 6.6E-116 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 RK98_RS00915 858a28bb92a882cb66c38edfe8944ebd 242 SMART SM00382 28 215 1.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS00915 858a28bb92a882cb66c38edfe8944ebd 242 Gene3D G3DSA:3.40.50.300 1 241 2.8E-80 T 28-03-2018 RK98_RS00915 858a28bb92a882cb66c38edfe8944ebd 242 Pfam PF00005 ABC transporter 19 167 9.3E-39 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS05220 c8407aefd996767a22ce2af27763b699 422 SUPERFAMILY SSF160964 117 172 5.75E-9 T 28-03-2018 RK98_RS05220 c8407aefd996767a22ce2af27763b699 422 SUPERFAMILY SSF160964 77 89 5.75E-9 T 28-03-2018 RK98_RS05220 c8407aefd996767a22ce2af27763b699 422 Gene3D G3DSA:1.10.3720.10 178 415 1.5E-44 T 28-03-2018 RK98_RS05220 c8407aefd996767a22ce2af27763b699 422 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 204 408 6.3E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS05220 c8407aefd996767a22ce2af27763b699 422 Gene3D G3DSA:1.20.58.370 41 154 1.6E-9 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain RK98_RS05220 c8407aefd996767a22ce2af27763b699 422 SUPERFAMILY SSF161098 169 408 1.7E-52 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS11500 f80b2f9b805b7b33b12d9d68fe523f70 96 Pfam PF05154 TM2 domain 26 76 3.5E-15 T 28-03-2018 IPR007829 TM2 domain RK98_RS08310 7523e3eb4b8e990bc3cfa3937fcd66a1 351 Pfam PF02687 FtsX-like permease family 258 343 4.9E-6 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 RK98_RS08310 7523e3eb4b8e990bc3cfa3937fcd66a1 351 Pfam PF12704 MacB-like periplasmic core domain 17 190 5.8E-8 T 28-03-2018 IPR025857 MacB-like periplasmic core domain RK98_RS14605 8f25fc12482e907398983a72280c1d4b 102 Hamap MF_01448 UPF0473 protein . 15 102 19.666 T 28-03-2018 IPR009711 Uncharacterised protein family UPF0473 RK98_RS14605 8f25fc12482e907398983a72280c1d4b 102 Pfam PF06949 Protein of unknown function (DUF1292) 24 101 4.0E-11 T 28-03-2018 IPR009711 Uncharacterised protein family UPF0473 RK98_RS00600 3e24fae0867eb2cba96fb014e78890d6 239 Pfam PF13365 Trypsin-like peptidase domain 60 206 1.1E-16 T 28-03-2018 RK98_RS00600 3e24fae0867eb2cba96fb014e78890d6 239 Gene3D G3DSA:2.40.10.10 134 238 2.3E-17 T 28-03-2018 RK98_RS00600 3e24fae0867eb2cba96fb014e78890d6 239 Gene3D G3DSA:2.40.10.10 47 133 9.1E-14 T 28-03-2018 RK98_RS00600 3e24fae0867eb2cba96fb014e78890d6 239 ProSitePatterns PS00672 Serine proteases, V8 family, histidine active site. 61 75 - T 28-03-2018 IPR028301 Serine proteases, V8 family, histidine active site RK98_RS00600 3e24fae0867eb2cba96fb014e78890d6 239 SUPERFAMILY SSF50494 31 237 6.51E-33 T 28-03-2018 IPR009003 Peptidase S1, PA clan RK98_RS00600 3e24fae0867eb2cba96fb014e78890d6 239 PRINTS PR00839 V8 serine protease family signature 60 77 4.4E-17 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00600 3e24fae0867eb2cba96fb014e78890d6 239 PRINTS PR00839 V8 serine protease family signature 40 57 4.4E-17 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00600 3e24fae0867eb2cba96fb014e78890d6 239 PRINTS PR00839 V8 serine protease family signature 181 197 4.4E-17 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS00600 3e24fae0867eb2cba96fb014e78890d6 239 PRINTS PR00839 V8 serine protease family signature 198 210 4.4E-17 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 RK98_RS12240 1064e78978118dcc52e1c311b25b9f24 315 Pfam PF03595 Voltage-dependent anion channel 12 290 3.7E-16 T 28-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 RK98_RS01180 f24aaebcb8342209edbcb82a3d17265e 176 Pfam PF03061 Thioesterase superfamily 31 102 7.1E-17 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 RK98_RS01180 f24aaebcb8342209edbcb82a3d17265e 176 SUPERFAMILY SSF54637 8 158 1.04E-44 T 28-03-2018 IPR029069 HotDog domain RK98_RS01180 f24aaebcb8342209edbcb82a3d17265e 176 Gene3D G3DSA:3.10.129.10 1 160 5.7E-44 T 28-03-2018 RK98_RS15075 04cba01834256cd3675e691df5e7133d 640 Pfam PF03389 MobA/MobL family 19 238 1.6E-55 T 28-03-2018 IPR005053 MobA/MobL protein RK98_RS12060 f0530a27ce5351be96bac5c7e395a1cd 173 Pfam PF02674 Colicin V production protein 3 160 1.1E-27 T 28-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 RK98_RS11690 36d393ed21f7c30268364da64ab07b33 268 Pfam PF02361 Cobalt transport protein 14 218 3.0E-23 T 28-03-2018 IPR003339 ABC/ECF transporter, transmembrane component RK98_RS04565 0e635c82b5c300d23438b4298666fbbb 152 PIRSF PIRSF032285 1 152 5.2E-64 T 28-03-2018 IPR011235 MepB-like RK98_RS04565 0e635c82b5c300d23438b4298666fbbb 152 Pfam PF08877 MepB protein 24 144 1.3E-48 T 28-03-2018 IPR011235 MepB-like RK98_RS09405 2c24623b73ed37537efd9de5a793c458 269 SUPERFAMILY SSF143597 44 245 1.29E-67 T 28-03-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal RK98_RS09405 2c24623b73ed37537efd9de5a793c458 269 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 123 241 2.8E-44 T 28-03-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal RK98_RS09405 2c24623b73ed37537efd9de5a793c458 269 Gene3D G3DSA:3.40.1700.10 116 244 6.4E-37 T 28-03-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal RK98_RS09405 2c24623b73ed37537efd9de5a793c458 269 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 7 257 9.1E-89 T 28-03-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 RK98_RS09405 2c24623b73ed37537efd9de5a793c458 269 PIRSF PIRSF004793 6 266 4.2E-91 T 28-03-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 RK98_RS09405 2c24623b73ed37537efd9de5a793c458 269 Hamap MF_01499 Diadenylate cyclase [dacA]. 8 259 32.5 T 28-03-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 RK98_RS10200 2339108dd0c84cfa43c92f56a7d0ff93 569 Pfam PF06048 Domain of unknown function (DUF927) 45 312 1.1E-40 T 28-03-2018 IPR009270 Domain of unknown function DUF927 RK98_RS04915 37262c7341d8132852d17b0e4c4bb1da 134 Gene3D G3DSA:3.40.1650.10 1 134 5.4E-29 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RK98_RS04915 37262c7341d8132852d17b0e4c4bb1da 134 Pfam PF05025 RbsD / FucU transport protein family 1 133 4.8E-41 T 28-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RK98_RS04915 37262c7341d8132852d17b0e4c4bb1da 134 SUPERFAMILY SSF102546 1 134 3.4E-38 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 RK98_RS04915 37262c7341d8132852d17b0e4c4bb1da 134 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 134 30.105 T 28-03-2018 IPR023064 D-ribose pyranase GO:0016872 RK98_RS00925 fb1791aabd7ac77d380f2d293e3533c8 353 Pfam PF13303 Phosphotransferase system, EIIC 15 344 2.3E-82 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS03985 6fdc147375a0f6477a62a893af16ba44 261 Pfam PF04507 Csa1 family 1 259 1.6E-124 T 28-03-2018 IPR007595 Csa1 family RK98_RS03985 6fdc147375a0f6477a62a893af16ba44 261 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 256 5.5E-116 T 28-03-2018 IPR007595 Csa1 family RK98_RS10555 a03e88ce0509d2ef2809cf3e12b7d7a7 53 Pfam PF06900 Protein of unknown function (DUF1270) 1 53 9.4E-38 T 28-03-2018 IPR009682 Protein of unknown function DUF1270 RK98_RS05005 608ba82ff220c672502063f954c93be4 389 SUPERFAMILY SSF53756 137 387 1.36E-17 T 28-03-2018 RK98_RS05005 608ba82ff220c672502063f954c93be4 389 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 21 389 1.2E-140 T 28-03-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 RK98_RS14305 a61c65370dc41a639247ffbbb4cc9791 136 Gene3D G3DSA:1.10.10.10 6 91 1.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14305 a61c65370dc41a639247ffbbb4cc9791 136 SUPERFAMILY SSF46785 5 132 2.96E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS14305 a61c65370dc41a639247ffbbb4cc9791 136 Pfam PF01475 Ferric uptake regulator family 12 128 2.9E-32 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 RK98_RS01205 d7fc7d108ab107c370ec77c1919c5b05 405 Pfam PF03631 Virulence factor BrkB 83 334 3.3E-69 T 28-03-2018 IPR017039 Virulence factor BrkB RK98_RS01205 d7fc7d108ab107c370ec77c1919c5b05 405 PIRSF PIRSF035875 55 355 2.1E-112 T 28-03-2018 IPR017039 Virulence factor BrkB RK98_RS01205 d7fc7d108ab107c370ec77c1919c5b05 405 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 72 333 7.9E-49 T 28-03-2018 IPR017039 Virulence factor BrkB RK98_RS04080 f85bffe1b86cae126488b00130ebf227 119 Pfam PF06993 Protein of unknown function (DUF1304) 11 117 1.9E-30 T 28-03-2018 IPR009732 Protein of unknown function DUF1304 RK98_RS04845 c41dfbe4cd04d178eda2135a85c0f8a1 1009 TIGRFAM TIGR03929 T7_esaA_Nterm: type VII secretion protein EsaA 11 208 4.4E-72 T 28-03-2018 IPR023838 Type VII secretion system EsaA GO:0016021 RK98_RS04845 c41dfbe4cd04d178eda2135a85c0f8a1 1009 Gene3D G3DSA:3.40.1710.10 39 200 4.2E-20 T 28-03-2018 RK98_RS13650 1a820a8402f2956b68b0da032f5f48da 73 Pfam PF10782 Zinc-finger 17 73 6.3E-26 T 28-03-2018 IPR019718 Protein of unknown function DUF2602 RK98_RS10445 f3619c45365c3b40a7b3b37e1964d907 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 65 231 5.0E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS10445 f3619c45365c3b40a7b3b37e1964d907 231 SUPERFAMILY SSF161098 20 221 1.57E-46 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS10445 f3619c45365c3b40a7b3b37e1964d907 231 Gene3D G3DSA:1.10.3720.10 17 231 9.8E-43 T 28-03-2018 RK98_RS08230 e43d3cb532f27bc9056cc7b3962b5661 425 Gene3D G3DSA:3.40.1710.10 28 246 1.1E-24 T 28-03-2018 RK98_RS08230 e43d3cb532f27bc9056cc7b3962b5661 425 Pfam PF12698 ABC-2 family transporter protein 9 406 3.8E-25 T 28-03-2018 RK98_RS09865 e24807e34451337d959ac09e5aaee22c 558 PIRSF PIRSF001294 1 558 9.6E-216 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RK98_RS09865 e24807e34451337d959ac09e5aaee22c 558 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 2 557 9.0E-175 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RK98_RS09865 e24807e34451337d959ac09e5aaee22c 558 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 557 29.535 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RK98_RS09865 e24807e34451337d959ac09e5aaee22c 558 Pfam PF03814 Potassium-transporting ATPase A subunit 5 555 1.4E-212 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 RK98_RS06020 23b70ce6d84bbac03560fbcc16b6ab3c 103 Gene3D G3DSA:3.10.450.150 1 102 6.6E-32 T 28-03-2018 RK98_RS06020 23b70ce6d84bbac03560fbcc16b6ab3c 103 Pfam PF06124 Staphylococcal protein of unknown function (DUF960) 4 102 1.6E-27 T 28-03-2018 IPR009303 Protein of unknown function DUF960 RK98_RS08325 6c3a3702255ba9ab2d21bcffd7c50c6f 151 Gene3D G3DSA:1.10.10.10 1 151 1.8E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08325 6c3a3702255ba9ab2d21bcffd7c50c6f 151 SMART SM00347 29 130 9.2E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS08325 6c3a3702255ba9ab2d21bcffd7c50c6f 151 SUPERFAMILY SSF46785 15 147 2.25E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS08325 6c3a3702255ba9ab2d21bcffd7c50c6f 151 Pfam PF12802 MarR family 36 92 7.6E-10 T 28-03-2018 RK98_RS05745 f66b330ddf2d149237e39c48aa9bdde1 250 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 11 116 2.7E-31 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS05745 f66b330ddf2d149237e39c48aa9bdde1 250 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 134 239 5.1E-34 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS05745 f66b330ddf2d149237e39c48aa9bdde1 250 SUPERFAMILY SSF46785 130 238 2.17E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS05745 f66b330ddf2d149237e39c48aa9bdde1 250 SUPERFAMILY SSF46785 1 117 2.16E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS05745 f66b330ddf2d149237e39c48aa9bdde1 250 Gene3D G3DSA:1.10.10.10 128 250 2.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS05745 f66b330ddf2d149237e39c48aa9bdde1 250 SMART SM00347 25 127 8.7E-4 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS05745 f66b330ddf2d149237e39c48aa9bdde1 250 SMART SM00347 149 247 0.14 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 RK98_RS05745 f66b330ddf2d149237e39c48aa9bdde1 250 Gene3D G3DSA:1.10.10.10 1 127 4.7E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07695 b884d5bed437701d238478fe08aea344 289 SUPERFAMILY SSF161098 68 258 1.83E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS07695 b884d5bed437701d238478fe08aea344 289 Gene3D G3DSA:1.10.3720.10 4 263 8.4E-39 T 28-03-2018 RK98_RS07695 b884d5bed437701d238478fe08aea344 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 274 6.0E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS07695 b884d5bed437701d238478fe08aea344 289 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 3 42 1.2E-5 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain RK98_RS05765 925b4c3e85012911ec9593ee0c510f33 157 Pfam PF07853 Protein of unknown function (DUF1648) 13 55 6.8E-13 T 28-03-2018 IPR012867 Domain of unknown function DUF1648 RK98_RS03890 fdfdd209426e2dfc6427036327a0d43a 120 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 4 113 3.3E-38 T 28-03-2018 IPR018745 Domain of unknown function DUF2294 RK98_RS05465 3ebc886ff3845aed712ee80666c15d65 127 PIRSF PIRSF016789 1 122 2.2E-46 T 28-03-2018 IPR007401 Protein of unknown function DUF454 RK98_RS05465 3ebc886ff3845aed712ee80666c15d65 127 Pfam PF04304 Protein of unknown function (DUF454) 2 113 2.5E-37 T 28-03-2018 IPR007401 Protein of unknown function DUF454 RK98_RS12340 42c0e61efdb27c2cf470a7994ae204b9 96 Pfam PF02325 YGGT family 15 83 3.3E-16 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 RK98_RS11010 49913f7cf5ab09dadb2a489c6625e18b 438 Pfam PF03553 Na+/H+ antiporter family 152 431 2.4E-66 T 28-03-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 RK98_RS11010 49913f7cf5ab09dadb2a489c6625e18b 438 Pfam PF13726 Na+-H+ antiporter family 3 89 3.1E-32 T 28-03-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal RK98_RS11700 6998d6a510da9f6c4d408b03d5f29bda 191 Pfam PF09819 ABC-type cobalt transport system, permease component 9 125 2.7E-31 T 28-03-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted RK98_RS11700 6998d6a510da9f6c4d408b03d5f29bda 191 PIRSF PIRSF037394 1 191 5.4E-60 T 28-03-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted RK98_RS13805 99cc0e58c5f7aa3b09c8fa99c64cfe55 226 Pfam PF04298 Putative neutral zinc metallopeptidase 1 222 2.6E-88 T 28-03-2018 IPR007395 Putative neutral zinc metallopeptidase RK98_RS14680 14954edef4e33243892ce3248edba73b 257 Pfam PF00899 ThiF family 6 160 2.6E-33 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RK98_RS14680 14954edef4e33243892ce3248edba73b 257 SUPERFAMILY SSF69572 4 245 1.11E-57 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 RK98_RS14680 14954edef4e33243892ce3248edba73b 257 Gene3D G3DSA:3.40.50.720 1 250 5.2E-40 T 28-03-2018 RK98_RS03710 cc0de961b47927d5ddd362e03006edf0 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 9.9E-55 T 28-03-2018 IPR010375 Cyclic-di-AMP receptor RK98_RS03710 cc0de961b47927d5ddd362e03006edf0 109 Gene3D G3DSA:3.30.70.120 1 109 2.5E-15 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal RK98_RS03710 cc0de961b47927d5ddd362e03006edf0 109 SUPERFAMILY SSF54913 1 107 4.82E-13 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta RK98_RS05050 4977f82a3751403e5d19e073c6e1d421 155 Gene3D G3DSA:3.40.930.10 1 151 4.1E-35 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS05050 4977f82a3751403e5d19e073c6e1d421 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 149 1.1E-32 T 28-03-2018 IPR002178 PTS EIIA type-2 domain RK98_RS05050 4977f82a3751403e5d19e073c6e1d421 155 SUPERFAMILY SSF55804 4 151 2.75E-36 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 RK98_RS06525 59396a17a94b3cd90cfa847133dcf6e8 234 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 230 1.1E-73 T 28-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 RK98_RS06525 59396a17a94b3cd90cfa847133dcf6e8 234 Gene3D G3DSA:3.20.20.70 2 232 8.0E-39 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 RK98_RS06525 59396a17a94b3cd90cfa847133dcf6e8 234 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 3 232 25.815 T 28-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 RK98_RS06525 59396a17a94b3cd90cfa847133dcf6e8 234 SUPERFAMILY SSF51366 3 228 9.42E-51 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 RK98_RS06525 59396a17a94b3cd90cfa847133dcf6e8 234 Pfam PF00977 Histidine biosynthesis protein 4 228 2.0E-61 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 RK98_RS02670 dc4152f4b80d65bf90f483a3f02a346c 214 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 18 208 5.0E-19 T 28-03-2018 IPR006214 Bax inhibitor 1-related RK98_RS03100 2fd92fc23d7e6194c524ba60cfa9bff4 150 Pfam PF12821 Threonine/Serine exporter, ThrE 6 133 3.5E-39 T 28-03-2018 IPR024528 Threonine/Serine exporter, ThrE RK98_RS08185 49c1db06c0fcef8b58212a34ae461804 118 Pfam PF16230 Domain of unknown function (DUF4889) 41 111 9.1E-37 T 28-03-2018 IPR032613 Protein of unknown function DUF4889 RK98_RS05400 6fe460062684ee4f3a53e620c0b1c15c 214 Gene3D G3DSA:3.90.470.20 1 116 7.4E-14 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RK98_RS05400 6fe460062684ee4f3a53e620c0b1c15c 214 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 106 172 9.3E-8 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RK98_RS05400 6fe460062684ee4f3a53e620c0b1c15c 214 Gene3D G3DSA:3.90.470.20 117 188 1.5E-7 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RK98_RS05400 6fe460062684ee4f3a53e620c0b1c15c 214 SUPERFAMILY SSF56214 15 99 1.78E-7 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RK98_RS05400 6fe460062684ee4f3a53e620c0b1c15c 214 SUPERFAMILY SSF56214 106 180 2.09E-14 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 RK98_RS10230 c6a55bf23d73062ca3e7aadba46d59b4 175 PIRSF PIRSF032437 1 175 1.9E-105 T 28-03-2018 IPR014570 Encapsidation protein CP3 RK98_RS01940 c6a55bf23d73062ca3e7aadba46d59b4 175 PIRSF PIRSF032437 1 175 1.9E-105 T 28-03-2018 IPR014570 Encapsidation protein CP3 RK98_RS05370 e06b885a0de04cb9a0a4d48d167232e0 449 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 428 3.9E-124 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 RK98_RS05370 e06b885a0de04cb9a0a4d48d167232e0 449 Pfam PF05525 Branched-chain amino acid transport protein 8 443 2.4E-160 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 RK98_RS09105 b9bcc7fa3bd972858fa039f1108e3853 82 Gene3D G3DSA:3.40.1800.10 6 82 8.2E-12 T 28-03-2018 RK98_RS09105 b9bcc7fa3bd972858fa039f1108e3853 82 Pfam PF01844 HNH endonuclease 28 80 3.7E-7 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 RK98_RS09105 b9bcc7fa3bd972858fa039f1108e3853 82 SUPERFAMILY SSF75712 8 45 4.84E-5 T 28-03-2018 RK98_RS11465 5525a32d30c5888e6a3c1c0e4da43992 106 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 106 6.8E-37 T 28-03-2018 IPR006542 Protein of unknown function DUF1093 RK98_RS11465 5525a32d30c5888e6a3c1c0e4da43992 106 SUPERFAMILY SSF159121 30 105 1.96E-12 T 28-03-2018 IPR006542 Protein of unknown function DUF1093 RK98_RS09150 5d3fdbd167e88822b254b33065540e64 284 Gene3D G3DSA:2.70.70.10 98 264 1.4E-26 T 28-03-2018 RK98_RS09150 5d3fdbd167e88822b254b33065540e64 284 SUPERFAMILY SSF51261 161 254 1.1E-22 T 28-03-2018 IPR011055 Duplicated hybrid motif RK98_RS09150 5d3fdbd167e88822b254b33065540e64 284 Pfam PF01551 Peptidase family M23 157 254 1.7E-19 T 28-03-2018 IPR016047 Peptidase M23 RK98_RS01500 ff350bf18d3aaca5dbe31ca57c987662 298 SUPERFAMILY SSF52540 4 222 2.15E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS01500 ff350bf18d3aaca5dbe31ca57c987662 298 SMART SM00382 27 206 1.8E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS01500 ff350bf18d3aaca5dbe31ca57c987662 298 Pfam PF00005 ABC transporter 18 157 1.4E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS01500 ff350bf18d3aaca5dbe31ca57c987662 298 Gene3D G3DSA:3.40.50.300 1 291 5.3E-50 T 28-03-2018 RK98_RS13925 b4590339138794c070e884444a315204 486 Gene3D G3DSA:3.10.350.10 435 486 1.6E-8 T 28-03-2018 RK98_RS13925 b4590339138794c070e884444a315204 486 Pfam PF01476 LysM domain 439 486 1.2E-5 T 28-03-2018 IPR018392 LysM domain RK98_RS13925 b4590339138794c070e884444a315204 486 SMART SM00257 438 486 1.5E-4 T 28-03-2018 IPR018392 LysM domain RK98_RS13925 b4590339138794c070e884444a315204 486 SUPERFAMILY SSF54106 438 486 3.14E-5 T 28-03-2018 IPR018392 LysM domain RK98_RS01815 63f155ca0c4d75059da561a8ff523723 106 Pfam PF05595 Domain of unknown function (DUF771) 13 100 2.0E-30 T 28-03-2018 IPR008489 Protein of unknown function DUF771 RK98_RS12955 df609c1139f536c8b197bf2d8db4dee9 122 SMART SM00422 14 82 1.7E-26 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS12955 df609c1139f536c8b197bf2d8db4dee9 122 SUPERFAMILY SSF46955 14 85 1.56E-19 T 28-03-2018 IPR009061 Putative DNA-binding domain RK98_RS12955 df609c1139f536c8b197bf2d8db4dee9 122 Gene3D G3DSA:1.10.1660.10 3 108 1.2E-23 T 28-03-2018 RK98_RS12955 df609c1139f536c8b197bf2d8db4dee9 122 Pfam PF13411 MerR HTH family regulatory protein 14 79 5.9E-20 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 RK98_RS04485 529f5db7cc80d875a1df0a01ec824ab4 237 Pfam PF11368 Protein of unknown function (DUF3169) 1 232 2.4E-48 T 28-03-2018 IPR021509 Protein of unknown function DUF3169 RK98_RS02660 fe33bacded92d75307350d30c479c8ce 119 SUPERFAMILY SSF46785 3 117 2.54E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS02660 fe33bacded92d75307350d30c479c8ce 119 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 8 118 4.3E-32 T 28-03-2018 IPR010166 Transcriptional regulator SarA/Rot GO:0006355 RK98_RS02660 fe33bacded92d75307350d30c479c8ce 119 Gene3D G3DSA:1.10.10.10 1 118 9.1E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS07065 8cca7ac704c6eaec1d52591f14cc0b29 336 Gene3D G3DSA:3.20.20.140 2 336 4.8E-56 T 28-03-2018 RK98_RS07065 8cca7ac704c6eaec1d52591f14cc0b29 336 Pfam PF04909 Amidohydrolase 53 332 9.7E-44 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 RK98_RS07065 8cca7ac704c6eaec1d52591f14cc0b29 336 SUPERFAMILY SSF51556 51 333 1.51E-71 T 28-03-2018 IPR032466 Metal-dependent hydrolase RK98_RS00795 f3abf385cfe37b0e3a011d651da897a5 167 Gene3D G3DSA:3.30.70.100 48 158 9.1E-9 T 28-03-2018 RK98_RS00795 f3abf385cfe37b0e3a011d651da897a5 167 SUPERFAMILY SSF54909 70 140 1.12E-8 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 ProSitePatterns PS00211 ABC transporters family signature. 422 436 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 266 6.2E-6 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 SUPERFAMILY SSF52540 276 520 4.17E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 Gene3D G3DSA:3.40.50.300 274 530 3.2E-68 T 28-03-2018 RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 Gene3D G3DSA:3.40.50.300 1 269 8.7E-70 T 28-03-2018 RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 SMART SM00382 33 233 8.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 SMART SM00382 306 499 5.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 Pfam PF00005 ABC transporter 24 183 4.1E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 Pfam PF00005 ABC transporter 298 449 4.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 RK98_RS05270 6832a55d1e64763ca8d85a722b7b5b85 530 SUPERFAMILY SSF52540 4 255 2.0E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00691 Adhesin B signature 221 239 1.1E-78 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00691 Adhesin B signature 76 95 1.1E-78 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00691 Adhesin B signature 266 284 1.1E-78 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00691 Adhesin B signature 195 212 1.1E-78 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00691 Adhesin B signature 244 261 1.1E-78 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00691 Adhesin B signature 287 305 1.1E-78 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00691 Adhesin B signature 32 53 1.1E-78 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00691 Adhesin B signature 137 156 1.1E-78 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00691 Adhesin B signature 57 75 1.1E-78 T 28-03-2018 IPR006129 Adhesin B GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00690 Adhesin family signature 274 293 6.5E-52 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00690 Adhesin family signature 76 93 6.5E-52 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00690 Adhesin family signature 195 216 6.5E-52 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00690 Adhesin family signature 32 50 6.5E-52 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00690 Adhesin family signature 63 76 6.5E-52 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 PRINTS PR00690 Adhesin family signature 248 266 6.5E-52 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 Gene3D G3DSA:3.40.50.1980 188 309 3.3E-32 T 28-03-2018 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 Gene3D G3DSA:3.40.50.1980 21 187 1.0E-46 T 28-03-2018 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 SUPERFAMILY SSF53807 12 308 5.4E-83 T 28-03-2018 RK98_RS02850 a1f145707b299afd2d416789a0731a39 309 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 304 2.3E-72 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 RK98_RS04910 19eac0ce3067fea2b02d7d390075c2e8 293 Pfam PF06800 Sugar transport protein 7 292 5.4E-109 T 28-03-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 RK98_RS04910 19eac0ce3067fea2b02d7d390075c2e8 293 SUPERFAMILY SSF103481 41 143 3.92E-5 T 28-03-2018 RK98_RS07955 0ce44f0896c796fb11efe774998f6f29 155 ProDom PD096809 MEMBRANE BIOX SA2210 PROBABLE PROTEIN BIOSYNTHESIS TRANSMEMBRANE BIOTIN MW2345 1 155 7.0E-35 T 28-03-2018 IPR020345 Biotin biosynthesis BioX RK98_RS00880 7705b61a320dc4a7eec5ceb430c49120 273 Gene3D G3DSA:3.30.2350.10 74 271 8.2E-50 T 28-03-2018 RK98_RS00880 7705b61a320dc4a7eec5ceb430c49120 273 SUPERFAMILY SSF55120 66 271 1.14E-52 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS00880 7705b61a320dc4a7eec5ceb430c49120 273 Pfam PF00849 RNA pseudouridylate synthase 83 229 1.2E-24 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 RK98_RS14600 beb90958fba6638fcd86b55a8afe1ec5 212 Gene3D G3DSA:3.40.50.150 2 212 1.0E-33 T 28-03-2018 RK98_RS14600 beb90958fba6638fcd86b55a8afe1ec5 212 SUPERFAMILY SSF53335 2 208 1.25E-36 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS14600 beb90958fba6638fcd86b55a8afe1ec5 212 Pfam PF01596 O-methyltransferase 42 208 2.7E-26 T 28-03-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 RK98_RS05245 524e1c35e4d896cb2719b02e98168eed 257 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 253 9.6E-119 T 28-03-2018 IPR007595 Csa1 family RK98_RS05245 524e1c35e4d896cb2719b02e98168eed 257 Pfam PF04507 Csa1 family 1 253 3.6E-96 T 28-03-2018 IPR007595 Csa1 family RK98_RS10990 a7dd21a54d510e9c2ef82482c2f29262 78 Hamap MF_01542 UPF0349 protein . 1 77 29.688 T 28-03-2018 IPR022916 Protein of unknown function UPF0349 RK98_RS10990 a7dd21a54d510e9c2ef82482c2f29262 78 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 1 74 2.0E-37 T 28-03-2018 RK98_RS10990 a7dd21a54d510e9c2ef82482c2f29262 78 Pfam PF07293 Protein of unknown function (DUF1450) 1 74 2.0E-35 T 28-03-2018 IPR009910 Protein of unknown function DUF1450 RK98_RS05425 d6d79d5cd679ed03b749e93846224812 343 SUPERFAMILY SSF56645 5 199 9.82E-23 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 RK98_RS05425 d6d79d5cd679ed03b749e93846224812 343 Gene3D G3DSA:2.40.110.10 97 201 4.9E-10 T 28-03-2018 RK98_RS11480 11f4ae5db610afd7be4a0bad2d006ea2 45 SUPERFAMILY SSF53756 1 44 6.59E-7 T 28-03-2018 RK98_RS10605 5546df97e111e5658efde2c3b88afb83 243 Pfam PF13730 Helix-turn-helix domain 19 73 6.9E-15 T 28-03-2018 RK98_RS10605 5546df97e111e5658efde2c3b88afb83 243 Gene3D G3DSA:1.10.238.10 54 232 5.3E-5 T 28-03-2018 RK98_RS12055 8182479013e42b88017a180e4fd6a04e 88 SUPERFAMILY SSF102829 7 86 1.24E-17 T 28-03-2018 IPR007838 Cell division protein ZapA-like RK98_RS12055 8182479013e42b88017a180e4fd6a04e 88 Pfam PF05164 Cell division protein ZapA 8 86 1.7E-13 T 28-03-2018 IPR007838 Cell division protein ZapA-like RK98_RS07585 53d22679ce4dab3362c448c530ffb7c3 108 Gene3D G3DSA:1.20.1270.10 15 103 0.0046 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain RK98_RS11040 21686fcd463285fda38ff6020c36289e 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 134 153 8.8E-12 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS11040 21686fcd463285fda38ff6020c36289e 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 164 188 8.8E-12 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS11040 21686fcd463285fda38ff6020c36289e 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 238 262 8.8E-12 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS11040 21686fcd463285fda38ff6020c36289e 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 378 404 8.8E-12 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS11040 21686fcd463285fda38ff6020c36289e 498 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 326 345 8.8E-12 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS11040 21686fcd463285fda38ff6020c36289e 498 Pfam PF00361 Proton-conducting membrane transporter 130 418 2.7E-51 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS11040 21686fcd463285fda38ff6020c36289e 498 TIGRFAM TIGR00944 2a6301s04: multicomponent K+:H+antiporter 5 467 9.0E-231 T 28-03-2018 IPR004775 Na(+)/H(+) antiporter subunit D1 GO:0006812|GO:0015386|GO:0016021 RK98_RS14105 bbc4607fd48c2ddb7d5c8e1091dc3ffa 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 142 6.1E-61 T 28-03-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family RK98_RS14105 bbc4607fd48c2ddb7d5c8e1091dc3ffa 145 Pfam PF06491 Disulphide isomerase 8 142 1.3E-60 T 28-03-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family RK98_RS13970 5866a4097a6dd5472b6028b4e3d82807 720 Gene3D G3DSA:1.20.120.20 349 718 7.2E-9 T 28-03-2018 RK98_RS06555 b881a2bf48e8b04cee3c74a0b35e04af 350 Pfam PF01757 Acyltransferase family 8 324 7.8E-23 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 RK98_RS14940 ccb10dbd21f6df467c72a2af4796deda 36 Gene3D G3DSA:3.40.1280.10 1 36 4.0E-5 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal RK98_RS13860 63ebb532f00a8e93aea51ca462c48e5f 190 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 70 141 1.9E-8 T 28-03-2018 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 RK98_RS02785 1ab819a86bbdd9f79265e8c3bddf4bd8 409 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 407 4.2E-46 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 RK98_RS02785 1ab819a86bbdd9f79265e8c3bddf4bd8 409 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 3.5E-18 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 RK98_RS01650 3b46026a4a80671e0b241f407b9443a0 214 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 10 202 5.9E-67 T 28-03-2018 IPR006490 Phage major tail protein, phi13 family RK98_RS04800 cd68e0d4feb9ba20974144f5606e6052 614 Gene3D G3DSA:1.20.120.20 1 377 2.0E-4 T 28-03-2018 RK98_RS04800 cd68e0d4feb9ba20974144f5606e6052 614 Pfam PF13930 DNA/RNA non-specific endonuclease 473 603 1.4E-32 T 28-03-2018 RK98_RS04800 cd68e0d4feb9ba20974144f5606e6052 614 Pfam PF14449 Pre-toxin TG 239 294 6.7E-8 T 28-03-2018 IPR027797 Pre-toxin TG domain RK98_RS03115 0b49b5e0ee9459b459bb58f900369988 126 Pfam PF17261 Family of unknown function (DUF5327) 2 126 6.6E-12 T 28-03-2018 IPR035218 Protein of unknown function DUF5327 RK98_RS07130 5835848e152a2f333fb6f8e61427face 603 Gene3D G3DSA:3.40.50.1110 402 598 6.0E-21 T 28-03-2018 RK98_RS07130 5835848e152a2f333fb6f8e61427face 603 SUPERFAMILY SSF52266 439 595 2.83E-17 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain RK98_RS07130 5835848e152a2f333fb6f8e61427face 603 Pfam PF01757 Acyltransferase family 19 339 1.9E-26 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 RK98_RS05420 2370509d9f89d2ebe7fd81e3b32d0eb1 119 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 7 116 1.3E-33 T 28-03-2018 IPR018745 Domain of unknown function DUF2294 RK98_RS01800 ea0bc9e39883596656011e56159c4d48 86 Pfam PF06531 Protein of unknown function (DUF1108) 1 84 3.4E-37 T 28-03-2018 IPR009494 Protein of unknown function DUF1108 RK98_RS03920 9bca886eb21eb8d77666659dea2642a3 20 Pfam PF17063 Phenol-soluble modulin alpha 4 peptide 1 20 3.7E-11 T 28-03-2018 IPR031429 Phenol-soluble modulin alpha 4 peptide GO:0009405 RK98_RS00840 801c35210f1749f17a288482bc775550 398 Pfam PF00149 Calcineurin-like phosphoesterase 3 198 1.3E-13 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 RK98_RS00840 801c35210f1749f17a288482bc775550 398 SUPERFAMILY SSF56300 1 296 8.92E-47 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS00840 801c35210f1749f17a288482bc775550 398 Gene3D G3DSA:3.60.21.10 1 77 9.0E-15 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS00840 801c35210f1749f17a288482bc775550 398 Gene3D G3DSA:3.60.21.10 78 249 2.7E-18 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like RK98_RS00840 801c35210f1749f17a288482bc775550 398 PIRSF PIRSF033091 1 398 3.1E-156 T 28-03-2018 IPR014576 Predicted phosphoesterase, YhaO type RK98_RS06665 a31b68547e890ca6e769e2b6c3752a4e 452 Hamap MF_01473 Glycosyltransferase stabilizing protein Gtf2 [gtf2]. 1 447 36.318 T 28-03-2018 IPR014268 Glycosyltransferase-stabilising protein Gtf2 GO:0031647 RK98_RS06665 a31b68547e890ca6e769e2b6c3752a4e 452 Gene3D G3DSA:3.40.50.2000 274 440 0.0014 T 28-03-2018 RK98_RS06665 a31b68547e890ca6e769e2b6c3752a4e 452 TIGRFAM TIGR02919 TIGR02919: accessory Sec system glycosyltransferase GtfB 1 446 3.1E-201 T 28-03-2018 IPR014268 Glycosyltransferase-stabilising protein Gtf2 GO:0031647 RK98_RS10695 d852e32ab39a3618b9fdb7af79e95b35 146 Pfam PF03592 Terminase small subunit 1 132 2.6E-29 T 28-03-2018 IPR005335 Terminase small subunit GO:0006323 RK98_RS05265 e952687b752914fe6e09cf0fc47e9794 492 SUPERFAMILY SSF161098 274 468 1.63E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS05265 e952687b752914fe6e09cf0fc47e9794 492 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 293 485 1.3E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS05265 e952687b752914fe6e09cf0fc47e9794 492 Gene3D G3DSA:1.10.3720.10 229 474 2.2E-37 T 28-03-2018 RK98_RS04470 4b935be95b14166226d222669692c379 377 Pfam PF06772 Bacterial low temperature requirement A protein (LtrA) 14 363 1.3E-51 T 28-03-2018 IPR010640 Low temperature requirement A RK98_RS02680 383ce42b5f84b98273b51caf8203c467 335 Pfam PF01384 Phosphate transporter family 22 324 1.4E-89 T 28-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 RK98_RS05045 0a9f2b029086ed08dc3f121e9e52aaac 92 Gene3D G3DSA:3.40.50.2300 1 92 9.7E-21 T 28-03-2018 RK98_RS05045 0a9f2b029086ed08dc3f121e9e52aaac 92 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 86 2.7E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS05045 0a9f2b029086ed08dc3f121e9e52aaac 92 SUPERFAMILY SSF52794 1 90 5.23E-21 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 RK98_RS10930 642322c7e429e22dc583822caf80045f 144 Pfam PF01934 Protein of unknown function DUF86 20 123 1.2E-15 T 28-03-2018 IPR008201 Protein of unknown function DUF86 RK98_RS10930 642322c7e429e22dc583822caf80045f 144 Gene3D G3DSA:1.20.120.580 1 139 2.3E-25 T 28-03-2018 IPR008201 Protein of unknown function DUF86 RK98_RS04615 b81a3f48a60d75ed087b18062ae8cc4f 314 Gene3D G3DSA:3.40.50.1220 18 294 1.8E-14 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS04615 b81a3f48a60d75ed087b18062ae8cc4f 314 SUPERFAMILY SSF52467 13 292 9.35E-38 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain RK98_RS08645 42d308aadf7c84b22cc09afc2d49fe1c 267 Pfam PF05257 CHAP domain 166 242 1.4E-14 T 28-03-2018 IPR007921 CHAP domain RK98_RS08645 42d308aadf7c84b22cc09afc2d49fe1c 267 SUPERFAMILY SSF54001 160 266 2.55E-16 T 28-03-2018 RK98_RS10795 e7e5af6a9328a1606ffd743e6ead1cbf 125 Pfam PF11192 Protein of unknown function (DUF2977) 1 61 1.6E-27 T 28-03-2018 IPR021358 Protein of unknown function DUF2977 RK98_RS07080 f63e75effb5f1022348b1ce8404d8cf8 99 Pfam PF10078 Uncharacterized protein conserved in bacteria (DUF2316) 1 99 6.5E-36 T 28-03-2018 IPR018757 Protein of unknown function DUF2316 RK98_RS08175 93b99e6794bf78d09cfb4bc69ed5f4af 121 Pfam PF11337 Protein of unknown function (DUF3139) 6 82 5.4E-20 T 28-03-2018 IPR021486 Protein of unknown function DUF3139 RK98_RS06000 0730d95a24bc584ea96dbd1e98c249ff 597 Pfam PF06048 Domain of unknown function (DUF927) 16 301 1.3E-75 T 28-03-2018 IPR009270 Domain of unknown function DUF927 RK98_RS11030 4470ab99691b761a3fe171bd208ed1d9 97 PIRSF PIRSF028784 1 93 3.4E-30 T 28-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 RK98_RS11030 4470ab99691b761a3fe171bd208ed1d9 97 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 32 83 3.0E-13 T 28-03-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 RK98_RS13385 ffe97803244d37d9fee67a04dcb54867 328 SUPERFAMILY SSF161098 95 291 1.7E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS13385 ffe97803244d37d9fee67a04dcb54867 328 Gene3D G3DSA:1.10.3720.10 4 294 2.1E-39 T 28-03-2018 RK98_RS13385 ffe97803244d37d9fee67a04dcb54867 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 305 4.0E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS08995 e5c5d1b2d7bd453b2cfd742ceb4e724b 119 Gene3D G3DSA:3.30.420.100 2 119 1.5E-40 T 28-03-2018 RK98_RS08995 e5c5d1b2d7bd453b2cfd742ceb4e724b 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 119 28.867 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08995 e5c5d1b2d7bd453b2cfd742ceb4e724b 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 119 6.4E-47 T 28-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 RK98_RS08995 e5c5d1b2d7bd453b2cfd742ceb4e724b 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 119 7.4E-43 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 RK98_RS08995 e5c5d1b2d7bd453b2cfd742ceb4e724b 119 SUPERFAMILY SSF53137 7 117 3.05E-49 T 28-03-2018 RK98_RS13515 ab4ebf0a82e3a06f348b697f9b8be80c 209 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 10 199 9.4E-62 T 28-03-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein RK98_RS13950 a35b64fbce1df493f0af978ba651743c 318 Pfam PF07901 Protein of unknown function (DUF1672) 42 310 2.3E-119 T 28-03-2018 IPR012873 Protein of unknown function DUF1672 RK98_RS04165 e79adf26b29b63070cd3c5c8d7e0e0cf 259 Pfam PF14355 Abortive infection C-terminus 181 253 1.6E-9 T 28-03-2018 IPR026001 Abortive infection protein-like, C-terminal domain RK98_RS10635 ba6ebc84c25e979699778d5cfd3392ab 123 Pfam PF07768 PVL ORF-50-like family 7 122 2.8E-62 T 28-03-2018 IPR011688 PVL Orf50 family RK98_RS08155 3403bfe3335eda01e9eaab2acd73c60c 304 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 87 292 4.4E-43 T 28-03-2018 IPR018728 Domain of unknown function DUF2268 RK98_RS03565 bb3195dc9730a9de3b79515a33f3a76d 179 Pfam PF00156 Phosphoribosyl transferase domain 12 159 9.0E-26 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 RK98_RS03565 bb3195dc9730a9de3b79515a33f3a76d 179 Gene3D G3DSA:3.40.50.2020 1 179 7.2E-47 T 28-03-2018 RK98_RS03565 bb3195dc9730a9de3b79515a33f3a76d 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 6.2E-65 T 28-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 RK98_RS03565 bb3195dc9730a9de3b79515a33f3a76d 179 SUPERFAMILY SSF53271 1 177 3.28E-57 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like RK98_RS07060 f306377d8c57378a85d8e2edf526bf7e 276 Gene3D G3DSA:3.40.50.1820 4 275 1.2E-30 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS07060 f306377d8c57378a85d8e2edf526bf7e 276 SUPERFAMILY SSF53474 2 273 7.28E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold RK98_RS07060 f306377d8c57378a85d8e2edf526bf7e 276 Pfam PF00561 alpha/beta hydrolase fold 20 137 2.3E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 RK98_RS11435 5be20f723513038c1cdd8aedf28988d0 58 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 3 57 3.0E-28 T 28-03-2018 IPR018690 Protein of unknown function DUF2187 RK98_RS05815 3ee4489b7f61d73ed3e0cc0c3e9affec 256 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 2 252 5.8E-115 T 28-03-2018 IPR007595 Csa1 family RK98_RS05815 3ee4489b7f61d73ed3e0cc0c3e9affec 256 Pfam PF04507 Csa1 family 2 253 5.8E-122 T 28-03-2018 IPR007595 Csa1 family RK98_RS07855 b9cf5af7e993e92f2969191ccfcac92e 692 Pfam PF00999 Sodium/hydrogen exchanger family 8 422 5.8E-51 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 RK98_RS09500 ec9cf2e91f2b2d8a5302193b9d316932 312 Gene3D G3DSA:2.60.120.10 1 219 8.3E-54 T 28-03-2018 IPR014710 RmlC-like jelly roll fold RK98_RS09500 ec9cf2e91f2b2d8a5302193b9d316932 312 PIRSF PIRSF036894 1 312 2.2E-116 T 28-03-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 RK98_RS09500 ec9cf2e91f2b2d8a5302193b9d316932 312 Gene3D G3DSA:2.60.120.10 232 312 3.1E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold RK98_RS09500 ec9cf2e91f2b2d8a5302193b9d316932 312 SUPERFAMILY SSF51182 2 312 1.99E-97 T 28-03-2018 IPR011051 RmlC-like cupin domain RK98_RS09500 ec9cf2e91f2b2d8a5302193b9d316932 312 Pfam PF01238 Phosphomannose isomerase type I 3 201 7.8E-27 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 RK98_RS10745 28aac90f32e3408658fd62e61afcef71 115 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 3 114 5.8E-26 T 28-03-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component RK98_RS10745 28aac90f32e3408658fd62e61afcef71 115 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 7 85 9.0E-10 T 28-03-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component RK98_RS05890 cd204095ad04d38695ce8bad7306f402 86 Pfam PF02583 Metal-sensitive transcriptional repressor 4 83 8.1E-25 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RK98_RS02525 ad4b6361eed8472edf3d21a43546bf15 140 Gene3D G3DSA:3.30.1330.80 1 140 3.3E-28 T 28-03-2018 RK98_RS02525 ad4b6361eed8472edf3d21a43546bf15 140 SUPERFAMILY SSF117856 3 137 2.41E-32 T 28-03-2018 RK98_RS02525 ad4b6361eed8472edf3d21a43546bf15 140 PIRSF PIRSF016702 1 140 4.4E-43 T 28-03-2018 IPR025707 Predicted DNA-binding protein with PD1-like DNA-binding motif RK98_RS02525 ad4b6361eed8472edf3d21a43546bf15 140 Pfam PF03479 Domain of unknown function (DUF296) 9 118 1.2E-18 T 28-03-2018 IPR005175 PPC domain RK98_RS07655 8415d64396af64002ceb43c1a9f58fa9 512 Pfam PF03806 AbgT putative transporter family 14 510 2.8E-218 T 28-03-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 RK98_RS04170 60fdbc80684df2a1efdfb67fe07228b3 166 Pfam PF07275 Antirestriction protein (ArdA) 5 162 4.3E-38 T 28-03-2018 IPR009899 Antirestriction RK98_RS04240 567179c2ab5074576ba127012f68b832 76 Pfam PF12645 Helix-turn-helix domain 10 74 3.7E-25 T 28-03-2018 IPR024760 Helix-turn-helix, conjugative transposon-like RK98_RS05010 1db8ea21255b4f50ae7f0b9684209d9c 513 Gene3D G3DSA:3.40.50.2000 332 478 0.0026 T 28-03-2018 RK98_RS05010 1db8ea21255b4f50ae7f0b9684209d9c 513 SUPERFAMILY SSF53756 224 510 9.42E-18 T 28-03-2018 RK98_RS05010 1db8ea21255b4f50ae7f0b9684209d9c 513 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 152 511 5.1E-102 T 28-03-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 RK98_RS04745 bec7f7e622e0e5a0633efdd2d27938b3 132 Pfam PF13273 Protein of unknown function (DUF4064) 1 102 2.8E-17 T 28-03-2018 IPR025273 Domain of unknown function DUF4064 RK98_RS08125 9aa0c88143019833633c29a2ce7bfde4 196 SUPERFAMILY SSF89155 45 183 3.27E-20 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone RK98_RS08125 9aa0c88143019833633c29a2ce7bfde4 196 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 48 178 1.5E-18 T 28-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 RK98_RS08125 9aa0c88143019833633c29a2ce7bfde4 196 Gene3D G3DSA:1.10.3480.10 24 186 1.9E-18 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone RK98_RS08125 9aa0c88143019833633c29a2ce7bfde4 196 Pfam PF02613 Nitrate reductase delta subunit 57 133 1.7E-5 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone RK98_RS01555 b7e5fc048dcd778742caa61de032c195 116 Pfam PF11546 Staphylococcal complement inhibitor SCIN 1 114 3.2E-48 T 28-03-2018 IPR021612 Staphylococcal complement inhibitor SCIN RK98_RS15060 928bb932abd8c8087c68120339bcc65b 311 Pfam PF06970 Replication initiator protein A (RepA) N-terminus 16 90 4.8E-30 T 28-03-2018 IPR010724 Replication initiator A, N-terminal RK98_RS10140 cb30afe116de16e354e2b1e718d9e2a1 415 PRINTS PR01217 Proline rich extensin signature 124 140 2.1E-11 T 28-03-2018 RK98_RS10140 cb30afe116de16e354e2b1e718d9e2a1 415 PRINTS PR01217 Proline rich extensin signature 160 185 2.1E-11 T 28-03-2018 RK98_RS10140 cb30afe116de16e354e2b1e718d9e2a1 415 PRINTS PR01217 Proline rich extensin signature 142 159 2.1E-11 T 28-03-2018 RK98_RS10140 cb30afe116de16e354e2b1e718d9e2a1 415 PRINTS PR01217 Proline rich extensin signature 97 118 2.1E-11 T 28-03-2018 RK98_RS12610 68c7e2820c228eb97563eb89d0b3a37d 868 Pfam PF09586 Bacterial membrane protein YfhO 20 851 2.1E-158 T 28-03-2018 IPR018580 Uncharacterised protein family YfhO RK98_RS04355 ccbfb65a6bc54f9c514a36e48a43dbe0 83 Pfam PF04226 Transglycosylase associated protein 34 79 4.3E-13 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 RK98_RS04810 8272f623e356a63a4bb1168fc6680b14 224 Pfam PF16887 Domain of unknown function (DUF5081) 4 223 1.5E-83 T 28-03-2018 IPR031682 Protein of unknown function DUF5081 RK98_RS07860 83109a216404e256a2d82a07dc8002e5 469 PIRSF PIRSF006060 1 468 3.6E-67 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS07860 83109a216404e256a2d82a07dc8002e5 469 Pfam PF00324 Amino acid permease 13 447 2.7E-101 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 RK98_RS01625 c7a3e20f9a1752255d3547a4346d9f8f 1260 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 25 336 5.8E-95 T 28-03-2018 IPR007119 Phage minor structural protein, N-terminal domain RK98_RS07845 480ac2b8788ab7d992048a7fd3cf6ea4 609 Pfam PF13520 Amino acid permease 50 446 4.3E-33 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS07690 442410a744dbf55bd55df8c677204bb5 311 SUPERFAMILY SSF161098 94 293 5.36E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS07690 442410a744dbf55bd55df8c677204bb5 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 307 3.3E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 RK98_RS07690 442410a744dbf55bd55df8c677204bb5 311 Gene3D G3DSA:1.10.3720.10 2 296 1.0E-36 T 28-03-2018 RK98_RS08675 5ecc7884ecb20c5ee7fbc5551655b40b 278 Pfam PF01774 UreD urease accessory protein 49 251 6.0E-47 T 28-03-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 RK98_RS08675 5ecc7884ecb20c5ee7fbc5551655b40b 278 Hamap MF_01384 Urease accessory protein UreD [ureD]. 6 264 23.763 T 28-03-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 RK98_RS01320 9ea2392f25552321db7acc20268789fe 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 2.6E-21 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RK98_RS01320 9ea2392f25552321db7acc20268789fe 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 2.2E-28 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RK98_RS01320 9ea2392f25552321db7acc20268789fe 100 SUPERFAMILY SSF141000 3 94 7.06E-30 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RK98_RS01320 9ea2392f25552321db7acc20268789fe 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 25.699 T 28-03-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 RK98_RS11195 fbd9cd68661a1b637b1b95aa9e30b661 144 Pfam PF03642 MAP domain 48 135 1.5E-35 T 28-03-2018 IPR005298 MAP domain RK98_RS11195 fbd9cd68661a1b637b1b95aa9e30b661 144 Gene3D G3DSA:3.10.20.120 48 141 1.5E-16 T 28-03-2018 RK98_RS06770 8e1f95781270cee3db12b5c60ea90f6b 33 Pfam PF10855 Protein of unknown function (DUF2648) 1 33 1.3E-18 T 28-03-2018 IPR022561 Protein of unknown function DUF2648 RK98_RS06770 8e1f95781270cee3db12b5c60ea90f6b 33 ProDom PD610536 SE2200 SAV2627.1 SA2420.1 MW2548 1 33 5.0E-12 T 28-03-2018 IPR022561 Protein of unknown function DUF2648 RK98_RS04335 75c6390f44c534b751b7dfc122595ccc 208 Gene3D G3DSA:3.40.190.10 1 207 2.3E-4 T 28-03-2018 RK98_RS07440 9c036c00dbbc895858d67ccdfd3a04f3 607 Pfam PF13515 Fusaric acid resistance protein-like 319 444 3.3E-17 T 28-03-2018 RK98_RS11485 23ada2a273123cbc1f332a776f31c772 118 Pfam PF07681 DoxX 5 82 2.0E-15 T 28-03-2018 IPR032808 DoxX family RK98_RS06080 2fb58aae7e3acfc967f2e42a378a24a3 86 Pfam PF02583 Metal-sensitive transcriptional repressor 4 82 7.8E-24 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 RK98_RS11890 f633d090650efc79e09df70802cf0486 408 Pfam PF01098 Cell cycle protein 23 386 2.5E-90 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 RK98_RS12975 3e5ff2cd49c18340ded37f9458b95b9d 74 Gene3D G3DSA:1.10.260.40 1 71 1.1E-4 T 28-03-2018 RK98_RS10240 245224e4d0342c9893cd9d62f81ff97e 189 Pfam PF03592 Terminase small subunit 4 145 5.2E-34 T 28-03-2018 IPR005335 Terminase small subunit GO:0006323 RK98_RS07405 59071adfd33fdc97e85a15b9b563bec2 256 Pfam PF12730 ABC-2 family transporter protein 4 184 1.8E-17 T 28-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 RK98_RS04930 a9087c64535c581573622a38135afee2 253 Gene3D G3DSA:3.40.50.150 11 202 1.6E-29 T 28-03-2018 RK98_RS04930 a9087c64535c581573622a38135afee2 253 Pfam PF13649 Methyltransferase domain 41 138 1.2E-19 T 28-03-2018 RK98_RS04930 a9087c64535c581573622a38135afee2 253 SUPERFAMILY SSF53335 14 251 2.46E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase RK98_RS01670 783cba355a15fed4f6c67b56ac54b706 94 Gene3D G3DSA:1.10.10.10 1 43 0.023 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain RK98_RS03575 bb419441b39151d097569efbd7e744b0 133 SUPERFAMILY SSF50249 4 86 6.66E-24 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold RK98_RS03575 bb419441b39151d097569efbd7e744b0 133 Pfam PF00575 S1 RNA binding domain 4 74 7.8E-21 T 28-03-2018 IPR003029 S1 domain GO:0003676 RK98_RS03575 bb419441b39151d097569efbd7e744b0 133 Gene3D G3DSA:2.40.50.140 7 126 6.2E-28 T 28-03-2018 RK98_RS03575 bb419441b39151d097569efbd7e744b0 133 SMART SM00316 4 74 6.3E-26 T 28-03-2018 IPR022967 RNA-binding domain, S1 RK98_RS07025 c66b1b7978974d1eb45936df89771586 92 TIGRFAM TIGR04197 T7SS_SACOL2603: type VII secretion effector, TIGR04197 family 5 89 1.5E-19 T 28-03-2018 IPR021477 Type VII secretion effector, SACOL2603 family RK98_RS03030 65fcf395859ee25b8c86c74ece0b7fc1 211 TIGRFAM TIGR01218 Gpos_tandem_5TM: tandem five-TM protein 7 208 5.6E-56 T 28-03-2018 IPR005915 Tandem five-TM protein RK98_RS03030 65fcf395859ee25b8c86c74ece0b7fc1 211 Pfam PF04276 Protein of unknown function (DUF443) 12 208 8.2E-66 T 28-03-2018 IPR005915 Tandem five-TM protein RK98_RS02280 dd95f3391917b7ff224ecca95282ebf6 104 Pfam PF05495 CHY zinc finger 15 88 1.0E-12 T 28-03-2018 IPR008913 Zinc finger, CHY-type GO:0008270 Reactome: R-HSA-110320|Reactome: R-HSA-983168 RK98_RS02280 dd95f3391917b7ff224ecca95282ebf6 104 SUPERFAMILY SSF161219 5 90 3.01E-20 T 28-03-2018 RK98_RS02280 dd95f3391917b7ff224ecca95282ebf6 104 PIRSF PIRSF017292 1 104 5.5E-53 T 28-03-2018 IPR016694 Protein of unknown function UCP017292, zinc finger, CHY-type RK98_RS01170 5e49d091241fb270f8f8b1184561c9c9 53 Gene3D G3DSA:1.10.150.130 2 52 5.8E-4 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal RK98_RS07310 075504d5c137cdfd8d53eb4e06d860dd 331 Pfam PF13303 Phosphotransferase system, EIIC 15 315 1.7E-41 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 RK98_RS01740 e560b1eb5daa770efae471da9775433c 78 Pfam PF06260 Protein of unknown function (DUF1024) 1 47 1.7E-26 T 28-03-2018 IPR009368 Protein of unknown function DUF1024 RK98_RS01720 d60b9c8a4c3f190884f082b389bfd4fb 68 Pfam PF07129 Protein of unknown function (DUF1381) 2 45 1.6E-28 T 28-03-2018 IPR009812 Protein of unknown function DUF1381 RK98_RS11380 ad2b8d7b2ce0dcbedb395d5d7a1522ea 86 Pfam PF14166 YueH-like protein 5 78 5.0E-28 T 28-03-2018 IPR020260 Uncharacterised protein family YueH RK98_RS10565 f7bf6de7a238f4a0b33f7a752617f3d9 86 Pfam PF06531 Protein of unknown function (DUF1108) 1 84 1.9E-30 T 28-03-2018 IPR009494 Protein of unknown function DUF1108 RK98_RS03430 a5925d98c2ab9a425838481673c84d4c 188 Pfam PF02151 UvrB/uvrC motif 145 179 5.5E-5 T 28-03-2018 IPR001943 UVR domain GO:0005515 RK98_RS03430 a5925d98c2ab9a425838481673c84d4c 188 PIRSF PIRSF015034 27 188 2.5E-54 T 28-03-2018 IPR025542 YacH protein RK98_RS03430 a5925d98c2ab9a425838481673c84d4c 188 PIRSF PIRSF015034 1 26 5.5 T 28-03-2018 IPR025542 YacH protein RK98_RS03430 a5925d98c2ab9a425838481673c84d4c 188 Gene3D G3DSA:4.10.860.10 108 184 1.5E-8 T 28-03-2018 IPR001943 UVR domain GO:0005515 RK98_RS06365 446466c1869215c88cde1338956dc227 117 Pfam PF11345 Protein of unknown function (DUF3147) 7 116 3.3E-45 T 28-03-2018 IPR021493 Protein of unknown function DUF3147 RK98_RS10125 13aad7f14b4cd53af17b5a7ff0c28da5 44 Pfam PF05372 Delta lysin family 19 43 2.2E-20 T 28-03-2018 IPR008034 Delta-hemolysin GO:0005576|GO:0019836 RK98_RS13270 8e73b08a63978959cc1e1a306c7abe8e 402 Pfam PF01594 AI-2E family transporter 43 373 3.1E-77 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like RK98_RS12520 49e8ebdf27ccc7c710254f0d7e63fa63 124 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 1.1E-32 T 28-03-2018 IPR005531 Alkaline shock protein Asp23 RK98_RS10775 f7c3b954ffebc467f209734cafa63fa2 315 Pfam PF05709 Phage tail protein 21 315 3.7E-52 T 28-03-2018 IPR008841 Siphovirus-type tail component RK98_RS10070 7fca7fd0acc7db806b5a1e9fff321787 342 Pfam PF04143 Sulphur transport 3 315 1.1E-98 T 28-03-2018 IPR007272 Sulphur transport domain RK98_RS08085 f0765dcf3870e59f3d819ef91e291387 274 Gene3D G3DSA:1.20.1080.10 13 274 6.1E-57 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 RK98_RS08085 f0765dcf3870e59f3d819ef91e291387 274 Pfam PF01226 Formate/nitrite transporter 30 262 4.5E-49 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 RK98_RS14550 48ce62128c17597674d58fecbca4478e 409 Pfam PF01566 Natural resistance-associated macrophage protein 53 378 3.9E-28 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 RK98_RS03580 4da86c2cb178a6bdda681dba4a398cbe 130 Pfam PF04977 Septum formation initiator 41 118 1.4E-18 T 28-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 RK98_RS03900 8a5a3d54953781c4b5f1eb68c1224337 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 68 93 8.6E-13 T 28-03-2018 RK98_RS03900 8a5a3d54953781c4b5f1eb68c1224337 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 251 8.6E-13 T 28-03-2018 RK98_RS03900 8a5a3d54953781c4b5f1eb68c1224337 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 291 303 8.6E-13 T 28-03-2018 RK98_RS03900 8a5a3d54953781c4b5f1eb68c1224337 494 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 203 224 8.6E-13 T 28-03-2018 RK98_RS03900 8a5a3d54953781c4b5f1eb68c1224337 494 Pfam PF00361 Proton-conducting membrane transporter 119 393 1.3E-51 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 RK98_RS05505 c7ec8baac7046f6232929a54a3e0f511 388 Pfam PF04932 O-Antigen ligase 193 326 6.0E-8 T 28-03-2018 IPR007016 O-antigen ligase-related RK98_RS03375 253679a3ffd31f3fa0bc1a7ee3fc7ea6 174 Pfam PF05991 YacP-like NYN domain 6 169 3.2E-48 T 28-03-2018 IPR010298 Protein of unknown function DUF901 RK98_RS10145 37e1788b95da53739b483ec533689125 247 Pfam PF02517 CAAX protease self-immunity 127 218 6.1E-16 T 28-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 RK98_RS06025 d95dcb111d9122763800658c1236df63 168 Pfam PF07799 Protein of unknown function (DUF1643) 21 156 2.4E-25 T 28-03-2018 IPR012441 Protein of unknown function DUF1643 RK98_RS06025 d95dcb111d9122763800658c1236df63 168 PIRSF PIRSF032209 1 168 4.6E-73 T 28-03-2018 IPR016992 Uncharacterised conserved protein UCP032209 RK98_RS14800 c73efbd55011f0faf0e3a93d1b299285 157 Pfam PF16284 Domain of unknown function (DUF4930) 25 156 3.8E-68 T 28-03-2018 IPR032561 Protein of unknown function DUF4930 RK98_RS04365 bb47a3e26d1c9ab7ab5d20462cf4189c 190 Pfam PF03413 Peptidase propeptide and YPEB domain 54 100 0.0026 T 28-03-2018 IPR025711 PepSY domain RK98_RS04365 bb47a3e26d1c9ab7ab5d20462cf4189c 190 Pfam PF03413 Peptidase propeptide and YPEB domain 130 186 1.0E-11 T 28-03-2018 IPR025711 PepSY domain RK98_RS04365 bb47a3e26d1c9ab7ab5d20462cf4189c 190 Gene3D G3DSA:3.10.450.40 129 188 9.0E-13 T 28-03-2018 RK98_RS04365 bb47a3e26d1c9ab7ab5d20462cf4189c 190 Gene3D G3DSA:3.10.450.40 53 113 3.8E-5 T 28-03-2018 RK98_RS05995 cc0a1457d15c91e41d21b04b601963ac 98 Pfam PF07205 Domain of unknown function (DUF1413) 14 81 2.8E-17 T 28-03-2018 IPR010813 Protein of unknown function DUF1413 RK98_RS09565 b0a8c4f8d2d5add58a3049f0b3877aca 223 Pfam PF11042 Protein of unknown function (DUF2750) 116 221 1.4E-21 T 28-03-2018 IPR021284 Protein of unknown function DUF2750 RK98_RS02610 ff1decd974939e8f7ecefdf912e93345 131 Gene3D G3DSA:1.20.5.400 19 71 3.9E-7 T 28-03-2018 RK98_RS10655 4532d0eb20cc0863a39bfbeb98cd5021 68 Pfam PF07129 Protein of unknown function (DUF1381) 2 45 1.6E-28 T 28-03-2018 IPR009812 Protein of unknown function DUF1381 RK98_RS00820 dfc464f47dcdde12ff4a675fc4db97e8 185 Pfam PF11667 Putative zincin peptidase 58 161 1.4E-19 T 28-03-2018 IPR021683 Putative zincin peptidase RK98_RS01785 161d43ba307f5dcf53daf948f279528f 306 TIGRFAM TIGR00616 rect: recombinase, phage RecT family 39 229 3.0E-16 T 28-03-2018 IPR004590 DNA single-strand annealing protein RecT GO:0003677|GO:0006259 RK98_RS01785 161d43ba307f5dcf53daf948f279528f 306 Pfam PF03837 RecT family 47 250 5.6E-52 T 28-03-2018 IPR018330 RecT family GO:0003677|GO:0006259 RK98_RS06650 bdc59b04b3b2c1bf9bac522313168341 319 TIGRFAM TIGR03711 acc_sec_asp3: accessory Sec system protein Asp3 8 140 9.6E-55 T 28-03-2018 IPR022259 Accessory Sec system protein Asp3 GO:0015031 RK98_RS06650 bdc59b04b3b2c1bf9bac522313168341 319 Pfam PF15432 Accessory Sec secretory system ASP3 18 142 4.8E-42 T 28-03-2018 IPR022259 Accessory Sec system protein Asp3 GO:0015031 RK98_RS05195 dfec0c1e3e4bd01910c5b6e7d77aee35 190 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 100 189 1.1E-30 T 28-03-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 RK98_RS10760 b55c6057af6ed36a2ef5ba38136fd4c3 121 Pfam PF12363 Phage tail assembly chaperone protein, TAC 3 112 4.0E-35 T 28-03-2018 IPR024410 Phage tail assembly chaperone protein, TAC RK98_RS08275 9e0c86db05dcc01174a340660a5c2dc7 557 SUPERFAMILY SSF53756 323 484 1.88E-5 T 28-03-2018 RK98_RS08275 9e0c86db05dcc01174a340660a5c2dc7 557 PIRSF PIRSF032341 1 557 0.0 T 28-03-2018 IPR016993 Predicted glycerophosphotransferase, SA2157 type RK98_RS08275 9e0c86db05dcc01174a340660a5c2dc7 557 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 447 522 1.4E-9 T 28-03-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 RK98_RS08275 9e0c86db05dcc01174a340660a5c2dc7 557 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 224 411 1.7E-17 T 28-03-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 RK98_RS04115 cd2a830c2e659fb8c7422158678ee292 396 Pfam PF00872 Transposase, Mutator family 7 366 2.2E-105 T 28-03-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 RK98_RS02245 a4f2012e8bd907d993c6af6f5d4c6121 164 Pfam PF12821 Threonine/Serine exporter, ThrE 8 134 3.3E-38 T 28-03-2018 IPR024528 Threonine/Serine exporter, ThrE RK98_RS08625 63b7e35707de01683610f1973ae95a31 140 Pfam PF09685 Domain of unknown function (DUF4870) 20 140 1.7E-27 T 28-03-2018 IPR019109 Protein of unknown function DUF4870 RK98_RS09740 97867c980dda121c5c369fbf8359b46d 167 Pfam PF14183 YwpF-like protein 23 152 2.6E-48 T 28-03-2018 IPR025573 YwpF-like protein RK98_RS12465 82d6d2e872c8c050581a352f6822b151 92 Pfam PF05154 TM2 domain 26 76 5.4E-17 T 28-03-2018 IPR007829 TM2 domain RK98_RS11345 9b7508390b7dc40d8f6bca6cf303ac06 361 Pfam PF01594 AI-2E family transporter 32 343 2.5E-62 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like RK98_RS00860 5fa067db539c8abe34b44d12aef345d4 374 Pfam PF04286 Protein of unknown function (DUF445) 12 373 8.8E-75 T 28-03-2018 IPR007383 Protein of unknown function DUF445 RK98_RS00860 5fa067db539c8abe34b44d12aef345d4 374 PIRSF PIRSF032178 1 374 2.2E-133 T 28-03-2018 IPR016991 Protein of unknown function UCP032178 RK98_RS12150 bb19a6380d8b2f36d7aa138da046caf7 116 Pfam PF11546 Staphylococcal complement inhibitor SCIN 1 116 1.4E-50 T 28-03-2018 IPR021612 Staphylococcal complement inhibitor SCIN RK98_RS11845 04f81bdd5893f3bf8e6f0ee35f356e03 139 Pfam PF13273 Protein of unknown function (DUF4064) 2 103 6.2E-20 T 28-03-2018 IPR025273 Domain of unknown function DUF4064 RK98_RS01930 89f29a143969634c77aabd68e8824480 189 Pfam PF03592 Terminase small subunit 4 145 6.8E-34 T 28-03-2018 IPR005335 Terminase small subunit GO:0006323 RK98_RS10850 aec5f9fc4ef34579348ba031df6d24c3 210 Pfam PF13274 Protein of unknown function (DUF4065) 30 119 2.1E-13 T 28-03-2018 IPR025272 Domain of unknown function DUF4065 RK98_RS09515 2aef2b5db3cfd226eaa027243a373bb5 137 Gene3D G3DSA:3.40.30.10 1 95 7.0E-4 T 28-03-2018 RK98_RS09515 2aef2b5db3cfd226eaa027243a373bb5 137 Pfam PF04134 Protein of unknown function, DUF393 4 111 6.4E-21 T 28-03-2018 IPR007263 Protein of unknown function DUF393 RK98_RS01960 072d5594800fae86d9b5b0bda2d399ff 213 Pfam PF16560 Putative mobile pathogenicity island 1 213 3.8E-124 T 28-03-2018 IPR032351 Putative mobile pathogenicity island RK98_RS08565 6c89441bf53752aabb8d28d04a9344d0 245 Pfam PF02517 CAAX protease self-immunity 142 234 4.6E-14 T 28-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 RK98_RS10720 2fa93803dae4b53649d460bb76a4e342 204 Pfam PF14265 Domain of unknown function (DUF4355) 49 170 4.2E-27 T 28-03-2018 IPR025580 Protein of unknown function DUF4355 RK98_RS10570 5603d878bab5dcd4857c97968acb67ca 73 Pfam PF10656 Hypothetical protein of unknown function (DUF2483) 1 72 1.5E-33 T 28-03-2018 IPR018918 Protein of unknown function DUF2483 RK98_RS06170 e282d0f892ecdc6c67809f10284ffb3a 65 Pfam PF01446 Replication protein 2 63 3.9E-12 T 28-03-2018 IPR000989 Replication protein GO:0003677|GO:0005727|GO:0006260 RK98_RS05845 6158d77c320e22b50b7a81de8a1a7bb9 200 Gene3D G3DSA:1.10.287.70 1 192 6.8E-4 T 28-03-2018 RK98_RS04200 b53ef915c5f66830263ee1aa5d7e8302 312 Pfam PF12642 Conjugative transposon protein TcpC 87 310 2.5E-59 T 28-03-2018 IPR024735 Conjugative transposon protein TcpC RK98_RS03105 1ccf07151b594f55759a71ec4063282a 494 Pfam PF13520 Amino acid permease 23 449 7.5E-41 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS03105 1ccf07151b594f55759a71ec4063282a 494 PIRSF PIRSF006060 1 482 1.2E-71 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 RK98_RS01290 52a2b8178cfa546eddac7caf17e0395b 176 Pfam PF11667 Putative zincin peptidase 57 157 1.8E-18 T 28-03-2018 IPR021683 Putative zincin peptidase RK98_RS06370 8d499161d071ae1a980b598c60cf3422 131 Pfam PF11345 Protein of unknown function (DUF3147) 5 111 5.3E-42 T 28-03-2018 IPR021493 Protein of unknown function DUF3147 RK98_RS04655 5ebaa6eb2b6feb36d75eacc28a76f3b5 437 Pfam PF07670 Nucleoside recognition 130 224 2.8E-9 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 RK98_RS04250 c9788d8895d6ba3af44715a324b326c9 66 Pfam PF11372 Domain of unknown function (DUF3173) 3 58 1.2E-23 T 28-03-2018 IPR021512 Protein of unknown function DUF3173 RK98_RS10400 86abff6fb8edcc676b4b3c42a7575c80 106 SUPERFAMILY SSF52833 3 103 5.98E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold RK98_RS10400 86abff6fb8edcc676b4b3c42a7575c80 106 Gene3D G3DSA:3.40.30.10 1 105 8.3E-21 T 28-03-2018 RK98_RS10400 86abff6fb8edcc676b4b3c42a7575c80 106 Pfam PF00085 Thioredoxin 6 102 2.5E-17 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 RK98_RS03095 d4fcc15abffc33ceddf4e6aa819c2379 254 Pfam PF06738 Putative threonine/serine exporter 16 253 5.1E-61 T 28-03-2018 IPR010619 Putative threonine/serine exporter RK98_RS14915 00402d32f31491446bf3c47218c2cdf1 271 Pfam PF01578 Cytochrome C assembly protein 60 265 7.9E-19 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 RK98_RS10680 a08651d71b645e086bb777b3950f2ad0 57 Pfam PF06116 Transcriptional activator RinB 3 53 3.5E-31 T 28-03-2018 IPR009300 Transcription activator RinB GO:0006355 RK98_RS10680 a08651d71b645e086bb777b3950f2ad0 57 ProDom PD053211 ACTIVATOR RINB PHAGE TRANSCRIPTIONAL ORF ORF090 GENE PHI INT ORF100 1 57 5.0E-26 T 28-03-2018 IPR009300 Transcription activator RinB GO:0006355 RK98_RS13975 26bb0dfb752347209ffc6b03a3d04e41 308 Pfam PF07901 Protein of unknown function (DUF1672) 38 307 1.9E-137 T 28-03-2018 IPR012873 Protein of unknown function DUF1672 RK98_RS13975 26bb0dfb752347209ffc6b03a3d04e41 308 Gene3D G3DSA:3.40.190.10 1 270 2.5E-4 T 28-03-2018 RK98_RS02625 f3324913721cadd8a9535247cd831c87 162 Pfam PF04306 Protein of unknown function (DUF456) 22 156 4.0E-36 T 28-03-2018 IPR007403 Protein of unknown function DUF456 RK98_RS04385 fc1a5e64fb1bffe98be015256e5db514 312 Pfam PF07751 Abi-like protein 28 216 2.9E-23 T 28-03-2018 IPR011664 Abortive infection system protein AbiD/AbiF-like RK98_RS14595 cc50f5afc17dce5825e37b9d67a5c4b4 307 Pfam PF01136 Peptidase family U32 72 304 5.6E-64 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 RK98_RS02895 1eed2d256c4db8ecc7eed9bf26147dcd 141 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 131 5.4E-32 T 28-03-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein RK98_RS05155 a8a5567c748910caf07506fb081c9e41 114 Pfam PF11546 Staphylococcal complement inhibitor SCIN 5 111 7.3E-44 T 28-03-2018 IPR021612 Staphylococcal complement inhibitor SCIN RK98_RS01495 05016511e3a9e6756d5a78bffde4d848 226 Pfam PF13346 ABC-2 family transporter protein 4 215 6.2E-27 T 28-03-2018 IPR025699 ABC-2 membrane transporter-like RK98_RS00670 ffb2f7b840a0216821079299225e734c 164 Gene3D G3DSA:3.40.190.10 1 150 3.0E-5 T 28-03-2018 RK98_RS07135 18066286b73073ba50429c5d2a2501a5 255 Pfam PF05257 CHAP domain 154 230 2.9E-14 T 28-03-2018 IPR007921 CHAP domain RK98_RS07135 18066286b73073ba50429c5d2a2501a5 255 SUPERFAMILY SSF54001 140 254 1.18E-14 T 28-03-2018 RK98_RS09335 48882881bf0a1619414c58fb349a8f1c 157 Pfam PF17080 Multidrug Resistance efflux pump 15 156 1.0E-58 T 28-03-2018 IPR031396 Multidrug resistance efflux pump SepA RK98_RS01130 7b204dbb825ab2dacf4110a5a4a4d90c 325 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 169 5.9E-26 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase RK98_RS04510 0add69ec375e6604152160130d6a4e4b 560 Pfam PF03239 Iron permease FTR1 family 300 479 3.0E-20 T 28-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 RK98_RS08210 f95cdc8cb44ca342727225b5e098cbc0 112 PIRSF PIRSF032441 1 106 5.5E-45 T 28-03-2018 IPR016996 Uncharacterised conserved protein UCP032441 RK98_RS08210 f95cdc8cb44ca342727225b5e098cbc0 112 Pfam PF08349 Protein of unknown function (DUF1722) 15 103 1.5E-16 T 28-03-2018 IPR013560 Domain of unknown function DUF1722 RK98_RS10705 e641c85281acbdd4aeebc9ca32c1c3d1 511 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 47 481 1.3E-111 T 28-03-2018 IPR021145 Portal protein RK98_RS10705 e641c85281acbdd4aeebc9ca32c1c3d1 511 TIGRFAM TIGR01538 portal_SPP1: phage portal protein, SPP1 family 41 477 8.8E-103 T 28-03-2018 IPR006428 Portal protein, SPP1-type RK98_RS11455 ea58dbb1b58db171e223af95cee1f1a8 90 TIGRFAM TIGR01653 lactococcin_972: bacteriocin, lactococcin 972 family 5 89 5.2E-10 T 28-03-2018 IPR006540 Bacteriocin, lactococcin 972 RK98_RS11455 ea58dbb1b58db171e223af95cee1f1a8 90 Pfam PF09683 Bacteriocin (Lactococcin_972) 26 87 1.9E-12 T 28-03-2018 IPR006540 Bacteriocin, lactococcin 972 RK98_RS03700 6f52597777cf3827121a6e2059c780f0 267 Pfam PF04468 PSP1 C-terminal conserved region 61 146 4.0E-26 T 28-03-2018 IPR007557 PSP1, C-terminal RK98_RS01445 0173ebc84133ca20c949d8deecb20518 133 Pfam PF08863 YolD-like protein 36 129 2.1E-25 T 28-03-2018 IPR014962 YolD-like protein