RK64_RS00020	PWY-5155	&beta;-alanine biosynthesis III
RK64_RS00030	PWY-6654	phosphopantothenate biosynthesis III
RK64_RS00035	PWY-6654	phosphopantothenate biosynthesis III
RK64_RS00035	PWY-7862	RK64_RS00035
RK64_RS00040	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RK64_RS00045	PWY-5481	pyruvate fermentation to lactate
RK64_RS00045	PWY-6901	superpathway of glucose and xylose degradation
RK64_RS00070	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS00070	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RK64_RS00070	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS00070	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RK64_RS00070	PWY-7385	1,3-propanediol biosynthesis (engineered)
RK64_RS00075	PWY-7254	TCA cycle VII (acetate-producers)
RK64_RS00100	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RK64_RS00100	PWY-7494	choline degradation IV
RK64_RS00105	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
RK64_RS00105	PWY-7494	choline degradation IV
RK64_RS00160	PWY-5194	siroheme biosynthesis
RK64_RS00160	PWY-5196	factor 430 biosynthesis
RK64_RS00160	PWY-5441	S-methyl-L-methionine cycle
RK64_RS00160	PWY-702	L-methionine biosynthesis II
RK64_RS00160	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RK64_RS00165	PWY-6683	sulfate reduction III (assimilatory)
RK64_RS00220	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RK64_RS00220	PWY-5491	diethylphosphate degradation
RK64_RS00260	PWY-4981	L-proline biosynthesis II (from arginine)
RK64_RS00260	PWY-4984	urea cycle
RK64_RS00260	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RK64_RS00265	PWY-4981	L-proline biosynthesis II (from arginine)
RK64_RS00300	PWY-6619	adenine and adenosine salvage VI
RK64_RS00305	PWY-3861	mannitol degradation II
RK64_RS00305	PWY-3881	mannitol biosynthesis
RK64_RS00305	PWY-5659	GDP-mannose biosynthesis
RK64_RS00305	PWY-6992	1,5-anhydrofructose degradation
RK64_RS00305	PWY-7456	mannan degradation
RK64_RS00305	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
RK64_RS00305	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RK64_RS00715	PWY-5028	L-histidine degradation II
RK64_RS00715	PWY-5030	L-histidine degradation III
RK64_RS00725	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
RK64_RS00740	PWY-5344	L-homocysteine biosynthesis
RK64_RS00750	PWY-7805	RK64_RS00750
RK64_RS00750	PWY-7807	RK64_RS00750
RK64_RS00770	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS00815	PWY-6825	phosphatidylcholine biosynthesis V
RK64_RS01095	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RK64_RS01130	PWY-6854	ethylene biosynthesis III (microbes)
RK64_RS01150	PWY-4202	arsenate detoxification I (glutaredoxin)
RK64_RS01150	PWY-5532	adenosine nucleotides degradation IV
RK64_RS01150	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RK64_RS01150	PWY-6608	guanosine nucleotides degradation III
RK64_RS01150	PWY-6609	adenine and adenosine salvage III
RK64_RS01150	PWY-6611	adenine and adenosine salvage V
RK64_RS01150	PWY-6620	guanine and guanosine salvage
RK64_RS01150	PWY-6627	salinosporamide A biosynthesis
RK64_RS01150	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
RK64_RS01150	PWY-7179	purine deoxyribonucleosides degradation I
RK64_RS01150	PWY-7179-1	purine deoxyribonucleosides degradation
RK64_RS01160	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RK64_RS01165	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RK64_RS01225	PWY-3162	L-tryptophan degradation V (side chain pathway)
RK64_RS01225	PWY-5057	L-valine degradation II
RK64_RS01225	PWY-5076	L-leucine degradation III
RK64_RS01225	PWY-5078	L-isoleucine degradation II
RK64_RS01225	PWY-5079	L-phenylalanine degradation III
RK64_RS01225	PWY-5082	L-methionine degradation III
RK64_RS01225	PWY-5480	pyruvate fermentation to ethanol I
RK64_RS01225	PWY-5486	pyruvate fermentation to ethanol II
RK64_RS01225	PWY-5751	phenylethanol biosynthesis
RK64_RS01225	PWY-6313	serotonin degradation
RK64_RS01225	PWY-6333	acetaldehyde biosynthesis I
RK64_RS01225	PWY-6342	noradrenaline and adrenaline degradation
RK64_RS01225	PWY-6587	pyruvate fermentation to ethanol III
RK64_RS01225	PWY-6802	salidroside biosynthesis
RK64_RS01225	PWY-6871	3-methylbutanol biosynthesis
RK64_RS01225	PWY-7013	L-1,2-propanediol degradation
RK64_RS01225	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RK64_RS01225	PWY-7118	chitin degradation to ethanol
RK64_RS01225	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RK64_RS01250	PWY-3821	galactose degradation III
RK64_RS01250	PWY-6317	galactose degradation I (Leloir pathway)
RK64_RS01250	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
RK64_RS01250	PWY-6527	stachyose degradation
RK64_RS01250	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
RK64_RS01250	PWY-7344	UDP-D-galactose biosynthesis
RK64_RS01365	PWY-1881	formate oxidation to CO<sub>2</sub>
RK64_RS01365	PWY-5497	purine nucleobases degradation II (anaerobic)
RK64_RS01365	PWY-6696	oxalate degradation III
RK64_RS01380	PWY-6012	acyl carrier protein metabolism I
RK64_RS01380	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RK64_RS01390	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RK64_RS01390	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RK64_RS01395	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RK64_RS01400	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RK64_RS01400	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RK64_RS01405	PWY-3341	L-proline biosynthesis III
RK64_RS01405	PWY-4981	L-proline biosynthesis II (from arginine)
RK64_RS01405	PWY-6344	L-ornithine degradation II (Stickland reaction)
RK64_RS01405	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RK64_RS01500	PWY-4041	&gamma;-glutamyl cycle
RK64_RS01500	PWY-5826	hypoglycin biosynthesis
RK64_RS01580	PWY-5480	pyruvate fermentation to ethanol I
RK64_RS01580	PWY-5485	pyruvate fermentation to acetate IV
RK64_RS01580	PWY-5493	reductive monocarboxylic acid cycle
RK64_RS01620	PWY-1361	benzoyl-CoA degradation I (aerobic)
RK64_RS01620	PWY-5109	2-methylbutanoate biosynthesis
RK64_RS01620	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
RK64_RS01620	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
RK64_RS01620	PWY-5177	glutaryl-CoA degradation
RK64_RS01620	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
RK64_RS01620	PWY-6435	4-hydroxybenzoate biosynthesis V
RK64_RS01620	PWY-6583	pyruvate fermentation to butanol I
RK64_RS01620	PWY-6863	pyruvate fermentation to hexanol
RK64_RS01620	PWY-6883	pyruvate fermentation to butanol II
RK64_RS01620	PWY-6944	androstenedione degradation
RK64_RS01620	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
RK64_RS01620	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
RK64_RS01620	PWY-7007	methyl ketone biosynthesis
RK64_RS01620	PWY-7046	4-coumarate degradation (anaerobic)
RK64_RS01620	PWY-7094	fatty acid salvage
RK64_RS01620	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
RK64_RS01620	PWY-735	jasmonic acid biosynthesis
RK64_RS01620	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
RK64_RS01620	PWY-7606	docosahexaenoate biosynthesis III (mammals)
RK64_RS01620	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
RK64_RS01620	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
RK64_RS01620	PWY-7726	RK64_RS01620
RK64_RS01620	PWY-7778	RK64_RS01620
RK64_RS01620	PWY-7779	RK64_RS01620
RK64_RS01620	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
RK64_RS01675	PWY-5481	pyruvate fermentation to lactate
RK64_RS01675	PWY-6901	superpathway of glucose and xylose degradation
RK64_RS01735	PWY-7560	methylerythritol phosphate pathway II
RK64_RS01755	PWY-7560	methylerythritol phosphate pathway II
RK64_RS02125	PWY-6019	pseudouridine degradation
RK64_RS02140	PWY-2941	L-lysine biosynthesis II
RK64_RS02140	PWY-2942	L-lysine biosynthesis III
RK64_RS02140	PWY-5097	L-lysine biosynthesis VI
RK64_RS02140	PWY-7581	<i>N</i>-acetylneuraminate and <i>N</i>-acetylmannosamine degradation II
RK64_RS02350	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
RK64_RS02350	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
RK64_RS02350	PWY-7717	RK64_RS02350
RK64_RS02350	PWY-7733	RK64_RS02350
RK64_RS02350	PWY-7734	RK64_RS02350
RK64_RS02350	PWY-7765	RK64_RS02350
RK64_RS02355	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RK64_RS02355	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RK64_RS02355	PWY-6936	seleno-amino acid biosynthesis
RK64_RS02355	PWY-702	L-methionine biosynthesis II
RK64_RS02360	PWY-2201	folate transformations I
RK64_RS02360	PWY-3841	folate transformations II
RK64_RS02545	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RK64_RS02545	PWY-6596	adenosine nucleotides degradation I
RK64_RS02545	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS02550	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS02850	PWY-6619	adenine and adenosine salvage VI
RK64_RS02925	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RK64_RS02925	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RK64_RS02925	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RK64_RS02925	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RK64_RS02925	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RK64_RS02925	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RK64_RS02960	PWY-2201	folate transformations I
RK64_RS02990	PWY-7560	methylerythritol phosphate pathway II
RK64_RS03015	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RK64_RS03015	PWY-5667	CDP-diacylglycerol biosynthesis I
RK64_RS03015	PWY-6453	stigma estolide biosynthesis
RK64_RS03015	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
RK64_RS03015	PWY-7587	oleate biosynthesis III (cyanobacteria)
RK64_RS03035	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
RK64_RS03075	PWY-6599	guanine and guanosine salvage II
RK64_RS03075	PWY-6609	adenine and adenosine salvage III
RK64_RS03075	PWY-6610	adenine and adenosine salvage IV
RK64_RS03075	PWY-6620	guanine and guanosine salvage
RK64_RS03090	PWY-6936	seleno-amino acid biosynthesis
RK64_RS03095	PWY-6614	tetrahydrofolate biosynthesis
RK64_RS03100	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RK64_RS03100	PWY-6148	tetrahydromethanopterin biosynthesis
RK64_RS03100	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RK64_RS03100	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RK64_RS03105	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RK64_RS03105	PWY-6148	tetrahydromethanopterin biosynthesis
RK64_RS03105	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
RK64_RS03105	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RK64_RS03105	PWY-7852	RK64_RS03105
RK64_RS03105	PWY-7853	RK64_RS03105
RK64_RS03205	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
RK64_RS03210	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
RK64_RS03250	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RK64_RS03260	PWY-6936	seleno-amino acid biosynthesis
RK64_RS03260	PWY-7274	D-cycloserine biosynthesis
RK64_RS03385	PWY-4261	glycerol degradation I
RK64_RS03395	PWY-5057	L-valine degradation II
RK64_RS03395	PWY-5076	L-leucine degradation III
RK64_RS03395	PWY-5078	L-isoleucine degradation II
RK64_RS03395	PWY-5101	L-isoleucine biosynthesis II
RK64_RS03395	PWY-5103	L-isoleucine biosynthesis III
RK64_RS03395	PWY-5104	L-isoleucine biosynthesis IV
RK64_RS03395	PWY-5108	L-isoleucine biosynthesis V
RK64_RS03395	PWY-7767	RK64_RS03395
RK64_RS03460	PWY-5663	tetrahydrobiopterin biosynthesis I
RK64_RS03460	PWY-5664	tetrahydrobiopterin biosynthesis II
RK64_RS03460	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
RK64_RS03460	PWY-6703	preQ<sub>0</sub> biosynthesis
RK64_RS03460	PWY-6983	tetrahydrobiopterin biosynthesis III
RK64_RS03460	PWY-7442	drosopterin and aurodrosopterin biosynthesis
RK64_RS03460	PWY-7852	RK64_RS03460
RK64_RS03475	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RK64_RS03475	PWY-6855	chitin degradation I (archaea)
RK64_RS03475	PWY-6906	chitin derivatives degradation
RK64_RS03480	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RK64_RS03480	PWY-5686	UMP biosynthesis
RK64_RS03480	PWY-7790	RK64_RS03480
RK64_RS03480	PWY-7791	RK64_RS03480
RK64_RS03480	PWY-7796	RK64_RS03480
RK64_RS03530	PWY-6910	hydroxymethylpyrimidine salvage
RK64_RS03530	PWY-7356	thiamin salvage IV (yeast)
RK64_RS03530	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RK64_RS03575	PWY-1281	sulfoacetaldehyde degradation I
RK64_RS03575	PWY-5482	pyruvate fermentation to acetate II
RK64_RS03575	PWY-5485	pyruvate fermentation to acetate IV
RK64_RS03575	PWY-5497	purine nucleobases degradation II (anaerobic)
RK64_RS03575	PWY-6637	sulfolactate degradation II
RK64_RS03580	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RK64_RS03585	PWY-6174	mevalonate pathway II (archaea)
RK64_RS03585	PWY-7391	isoprene biosynthesis II (engineered)
RK64_RS03585	PWY-922	mevalonate pathway I
RK64_RS03590	PWY-7391	isoprene biosynthesis II (engineered)
RK64_RS03590	PWY-922	mevalonate pathway I
RK64_RS03595	PWY-7391	isoprene biosynthesis II (engineered)
RK64_RS03595	PWY-922	mevalonate pathway I
RK64_RS03875	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
RK64_RS03875	PWY-622	starch biosynthesis
RK64_RS03875	PWY-7815	RK64_RS03875
RK64_RS03875	PWY-7816	RK64_RS03875
RK64_RS03875	PWY-7819	RK64_RS03875
RK64_RS03905	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RK64_RS03905	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RK64_RS04120	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
RK64_RS04205	PWY-6619	adenine and adenosine salvage VI
RK64_RS04210	PWY-6906	chitin derivatives degradation
RK64_RS04210	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
RK64_RS04210	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
RK64_RS04255	PWY-6703	preQ<sub>0</sub> biosynthesis
RK64_RS04265	PWY-6703	preQ<sub>0</sub> biosynthesis
RK64_RS04270	PWY-5958	acridone alkaloid biosynthesis
RK64_RS04270	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RK64_RS04270	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RK64_RS04275	PWY-5958	acridone alkaloid biosynthesis
RK64_RS04275	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RK64_RS04275	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RK64_RS04360	PWY-6700	queuosine biosynthesis
RK64_RS04380	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RK64_RS04380	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RK64_RS04380	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RK64_RS04380	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RK64_RS04380	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RK64_RS04380	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RK64_RS04380	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RK64_RS04380	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RK64_RS04385	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RK64_RS04385	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RK64_RS04385	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RK64_RS04385	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RK64_RS04385	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RK64_RS04385	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RK64_RS04385	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RK64_RS04385	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RK64_RS04425	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RK64_RS04425	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RK64_RS04470	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RK64_RS04470	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RK64_RS04470	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RK64_RS04615	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS04615	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS04615	PWY-6901	superpathway of glucose and xylose degradation
RK64_RS04615	PWY-7003	glycerol degradation to butanol
RK64_RS04620	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS04620	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS04620	PWY-6886	1-butanol autotrophic biosynthesis
RK64_RS04620	PWY-6901	superpathway of glucose and xylose degradation
RK64_RS04620	PWY-7003	glycerol degradation to butanol
RK64_RS04625	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS04625	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS04625	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RK64_RS04625	PWY-7003	glycerol degradation to butanol
RK64_RS04630	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS04630	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RK64_RS04630	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS04630	PWY-5723	Rubisco shunt
RK64_RS04630	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RK64_RS04630	PWY-6886	1-butanol autotrophic biosynthesis
RK64_RS04630	PWY-6901	superpathway of glucose and xylose degradation
RK64_RS04630	PWY-7003	glycerol degradation to butanol
RK64_RS04630	PWY-7124	ethylene biosynthesis V (engineered)
RK64_RS04630	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RK64_RS04635	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS04635	PWY-1622	formaldehyde assimilation I (serine pathway)
RK64_RS04635	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RK64_RS04635	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS04635	PWY-5723	Rubisco shunt
RK64_RS04635	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RK64_RS04635	PWY-6886	1-butanol autotrophic biosynthesis
RK64_RS04635	PWY-6901	superpathway of glucose and xylose degradation
RK64_RS04635	PWY-7003	glycerol degradation to butanol
RK64_RS04635	PWY-7124	ethylene biosynthesis V (engineered)
RK64_RS04635	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RK64_RS04790	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RK64_RS04790	PWY-6416	quinate degradation II
RK64_RS04790	PWY-6707	gallate biosynthesis
RK64_RS04875	PWY-6823	molybdenum cofactor biosynthesis
RK64_RS04875	PWY-6891	thiazole biosynthesis II (Bacillus)
RK64_RS04875	PWY-6892	thiazole biosynthesis I (E. coli)
RK64_RS04875	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RK64_RS04910	PWY-723	alkylnitronates degradation
RK64_RS04935	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RK64_RS04935	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RK64_RS05100	PWY-3341	L-proline biosynthesis III
RK64_RS05100	PWY-4981	L-proline biosynthesis II (from arginine)
RK64_RS05100	PWY-6344	L-ornithine degradation II (Stickland reaction)
RK64_RS05100	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RK64_RS05120	PWY-4983	L-citrulline-nitric oxide cycle
RK64_RS05120	PWY-4984	urea cycle
RK64_RS05120	PWY-5	canavanine biosynthesis
RK64_RS05120	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RK64_RS05120	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RK64_RS05125	PWY-4983	L-citrulline-nitric oxide cycle
RK64_RS05125	PWY-4984	urea cycle
RK64_RS05125	PWY-5	canavanine biosynthesis
RK64_RS05125	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RK64_RS05125	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RK64_RS05130	PWY-3801	sucrose degradation II (sucrose synthase)
RK64_RS05130	PWY-5054	sorbitol biosynthesis I
RK64_RS05130	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
RK64_RS05130	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RK64_RS05130	PWY-5659	GDP-mannose biosynthesis
RK64_RS05130	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RK64_RS05130	PWY-621	sucrose degradation III (sucrose invertase)
RK64_RS05130	PWY-622	starch biosynthesis
RK64_RS05130	PWY-6981	chitin biosynthesis
RK64_RS05130	PWY-6992	1,5-anhydrofructose degradation
RK64_RS05130	PWY-7238	sucrose biosynthesis II
RK64_RS05130	PWY-7347	sucrose biosynthesis III
RK64_RS05130	PWY-7385	1,3-propanediol biosynthesis (engineered)
RK64_RS05200	PWY-6871	3-methylbutanol biosynthesis
RK64_RS05230	PWY-4381	fatty acid biosynthesis initiation I
RK64_RS05345	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
RK64_RS05345	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RK64_RS05345	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
RK64_RS05365	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RK64_RS05365	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RK64_RS05365	PWY-5989	stearate biosynthesis II (bacteria and plants)
RK64_RS05365	PWY-6113	superpathway of mycolate biosynthesis
RK64_RS05365	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RK64_RS05365	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RK64_RS05365	PWY-7663	gondoate biosynthesis (anaerobic)
RK64_RS05365	PWY-7664	oleate biosynthesis IV (anaerobic)
RK64_RS05365	PWY-7858	RK64_RS05365
RK64_RS05365	PWYG-321	mycolate biosynthesis
RK64_RS05395	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RK64_RS05395	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RK64_RS05395	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RK64_RS05395	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RK64_RS05395	PWY-6778	laminaribiose degradation
RK64_RS05395	PWY-7817	RK64_RS05395
RK64_RS05540	PWY-5839	menaquinol-7 biosynthesis
RK64_RS05540	PWY-5851	demethylmenaquinol-9 biosynthesis
RK64_RS05540	PWY-5852	demethylmenaquinol-8 biosynthesis I
RK64_RS05540	PWY-5853	demethylmenaquinol-6 biosynthesis I
RK64_RS05540	PWY-5890	menaquinol-10 biosynthesis
RK64_RS05540	PWY-5891	menaquinol-11 biosynthesis
RK64_RS05540	PWY-5892	menaquinol-12 biosynthesis
RK64_RS05540	PWY-5895	menaquinol-13 biosynthesis
RK64_RS05550	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RK64_RS05550	PWY-5901	2,3-dihydroxybenzoate biosynthesis
RK64_RS05550	PWY-6406	salicylate biosynthesis I
RK64_RS05555	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RK64_RS05560	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RK64_RS05565	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RK64_RS05640	PWY-3781	aerobic respiration I (cytochrome c)
RK64_RS05640	PWY-4521	arsenite oxidation I (respiratory)
RK64_RS05640	PWY-6692	Fe(II) oxidation
RK64_RS05640	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RK64_RS05660	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RK64_RS05660	PWY-2201	folate transformations I
RK64_RS05660	PWY-3841	folate transformations II
RK64_RS05660	PWY-5030	L-histidine degradation III
RK64_RS05660	PWY-5497	purine nucleobases degradation II (anaerobic)
RK64_RS05660	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RK64_RS05665	PWY-6123	inosine-5'-phosphate biosynthesis I
RK64_RS05665	PWY-7234	inosine-5'-phosphate biosynthesis III
RK64_RS05675	PWY-6123	inosine-5'-phosphate biosynthesis I
RK64_RS05675	PWY-6124	inosine-5'-phosphate biosynthesis II
RK64_RS05675	PWY-7234	inosine-5'-phosphate biosynthesis III
RK64_RS05680	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RK64_RS05680	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RK64_RS05680	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RK64_RS05685	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RK64_RS05685	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RK64_RS05685	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RK64_RS05690	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RK64_RS05690	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RK64_RS05690	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RK64_RS05695	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RK64_RS05695	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RK64_RS05695	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RK64_RS05695	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RK64_RS05700	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RK64_RS05700	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RK64_RS05700	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RK64_RS05705	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RK64_RS05705	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
RK64_RS05710	PWY-6123	inosine-5'-phosphate biosynthesis I
RK64_RS05710	PWY-6124	inosine-5'-phosphate biosynthesis II
RK64_RS05710	PWY-7234	inosine-5'-phosphate biosynthesis III
RK64_RS05715	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
RK64_RS05715	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
RK64_RS05715	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
RK64_RS05835	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RK64_RS05835	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RK64_RS05925	PWY-5750	itaconate biosynthesis
RK64_RS05925	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RK64_RS05925	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
RK64_RS05980	PWY-7851	RK64_RS05980
RK64_RS06120	PWY-3781	aerobic respiration I (cytochrome c)
RK64_RS06120	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RK64_RS06120	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RK64_RS06120	PWY-5690	TCA cycle II (plants and fungi)
RK64_RS06120	PWY-6728	methylaspartate cycle
RK64_RS06120	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RK64_RS06120	PWY-7254	TCA cycle VII (acetate-producers)
RK64_RS06120	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RK64_RS06125	PWY-3781	aerobic respiration I (cytochrome c)
RK64_RS06125	PWY-4302	aerobic respiration III (alternative oxidase pathway)
RK64_RS06125	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RK64_RS06125	PWY-5690	TCA cycle II (plants and fungi)
RK64_RS06125	PWY-6728	methylaspartate cycle
RK64_RS06125	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RK64_RS06125	PWY-7254	TCA cycle VII (acetate-producers)
RK64_RS06125	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RK64_RS06130	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RK64_RS06130	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RK64_RS06230	PWY-4981	L-proline biosynthesis II (from arginine)
RK64_RS06230	PWY-4984	urea cycle
RK64_RS06230	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RK64_RS06295	PWY-2201	folate transformations I
RK64_RS06310	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RK64_RS06310	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RK64_RS06310	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RK64_RS06315	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RK64_RS06315	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RK64_RS06340	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RK64_RS06395	PWY-7183	pyrimidine nucleobases salvage I
RK64_RS06405	PWY-5686	UMP biosynthesis
RK64_RS06405	PWY-7790	RK64_RS06405
RK64_RS06405	PWY-7791	RK64_RS06405
RK64_RS06410	PWY-5686	UMP biosynthesis
RK64_RS06410	PWY-7790	RK64_RS06410
RK64_RS06410	PWY-7791	RK64_RS06410
RK64_RS06415	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RK64_RS06415	PWY-5686	UMP biosynthesis
RK64_RS06415	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RK64_RS06415	PWY-7790	RK64_RS06415
RK64_RS06415	PWY-7791	RK64_RS06415
RK64_RS06420	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RK64_RS06420	PWY-5686	UMP biosynthesis
RK64_RS06420	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RK64_RS06420	PWY-7790	RK64_RS06420
RK64_RS06420	PWY-7791	RK64_RS06420
RK64_RS06425	PWY-5686	UMP biosynthesis
RK64_RS06425	PWY-7790	RK64_RS06425
RK64_RS06425	PWY-7791	RK64_RS06425
RK64_RS06430	PWY-5686	UMP biosynthesis
RK64_RS06430	PWY-7790	RK64_RS06430
RK64_RS06430	PWY-7791	RK64_RS06430
RK64_RS06450	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS06460	PWY-7851	RK64_RS06460
RK64_RS06490	PWY-6825	phosphatidylcholine biosynthesis V
RK64_RS06495	PWY-2201	folate transformations I
RK64_RS06515	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RK64_RS06515	PWY-5723	Rubisco shunt
RK64_RS06520	PWY-6898	thiamin salvage III
RK64_RS06520	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RK64_RS06520	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RK64_RS06520	PWY-7356	thiamin salvage IV (yeast)
RK64_RS06555	PWY-4381	fatty acid biosynthesis initiation I
RK64_RS06555	PWY-6799	fatty acid biosynthesis (plant mitochondria)
RK64_RS06555	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RK64_RS06560	PWY-5367	petroselinate biosynthesis
RK64_RS06560	PWY-5515	L-arabinose degradation II
RK64_RS06560	PWY-5525	D-glucuronate degradation I
RK64_RS06560	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RK64_RS06560	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RK64_RS06560	PWY-5989	stearate biosynthesis II (bacteria and plants)
RK64_RS06560	PWY-5994	palmitate biosynthesis I (animals and fungi)
RK64_RS06560	PWY-6113	superpathway of mycolate biosynthesis
RK64_RS06560	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RK64_RS06560	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RK64_RS06560	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RK64_RS06560	PWY-7663	gondoate biosynthesis (anaerobic)
RK64_RS06560	PWY-7664	oleate biosynthesis IV (anaerobic)
RK64_RS06560	PWY-7858	RK64_RS06560
RK64_RS06560	PWYG-321	mycolate biosynthesis
RK64_RS06610	PWY-6829	tRNA methylation (yeast)
RK64_RS06610	PWY-7285	methylwyosine biosynthesis
RK64_RS06610	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
RK64_RS06635	PWY-5392	reductive TCA cycle II
RK64_RS06635	PWY-5537	pyruvate fermentation to acetate V
RK64_RS06635	PWY-5538	pyruvate fermentation to acetate VI
RK64_RS06635	PWY-5690	TCA cycle II (plants and fungi)
RK64_RS06635	PWY-5913	TCA cycle VI (obligate autotrophs)
RK64_RS06635	PWY-6728	methylaspartate cycle
RK64_RS06635	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RK64_RS06635	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RK64_RS06640	PWY-5392	reductive TCA cycle II
RK64_RS06640	PWY-5537	pyruvate fermentation to acetate V
RK64_RS06640	PWY-5538	pyruvate fermentation to acetate VI
RK64_RS06640	PWY-5690	TCA cycle II (plants and fungi)
RK64_RS06640	PWY-5913	TCA cycle VI (obligate autotrophs)
RK64_RS06640	PWY-6728	methylaspartate cycle
RK64_RS06640	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RK64_RS06640	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RK64_RS06725	PWY-5667	CDP-diacylglycerol biosynthesis I
RK64_RS06725	PWY-5981	CDP-diacylglycerol biosynthesis III
RK64_RS06725	PWY-7817	RK64_RS06725
RK64_RS06785	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
RK64_RS06785	PWY-6167	flavin biosynthesis II (archaea)
RK64_RS06785	PWY-6168	flavin biosynthesis III (fungi)
RK64_RS06785	PWY-7863	RK64_RS06785
RK64_RS06845	PWY-5269	cardiolipin biosynthesis II
RK64_RS06845	PWY-5668	cardiolipin biosynthesis I
RK64_RS06845	PWY-7817	RK64_RS06845
RK64_RS06875	PWY-5392	reductive TCA cycle II
RK64_RS06875	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RK64_RS06925	PWY-4261	glycerol degradation I
RK64_RS06930	PWY-4261	glycerol degradation I
RK64_RS06930	PWY-6118	glycerol-3-phosphate shuttle
RK64_RS06930	PWY-6952	glycerophosphodiester degradation
RK64_RS06940	PWY-2781	<i>cis</i>-zeatin biosynthesis
RK64_RS06970	PWY-381	nitrate reduction II (assimilatory)
RK64_RS06970	PWY-5675	nitrate reduction V (assimilatory)
RK64_RS06970	PWY-6549	L-glutamine biosynthesis III
RK64_RS06970	PWY-6963	ammonia assimilation cycle I
RK64_RS06970	PWY-6964	ammonia assimilation cycle II
RK64_RS07125	PWY-2941	L-lysine biosynthesis II
RK64_RS07125	PWY-2942	L-lysine biosynthesis III
RK64_RS07125	PWY-5097	L-lysine biosynthesis VI
RK64_RS07125	PWY-6559	spermidine biosynthesis II
RK64_RS07125	PWY-6562	norspermidine biosynthesis
RK64_RS07125	PWY-7153	grixazone biosynthesis
RK64_RS07140	PWY-702	L-methionine biosynthesis II
RK64_RS07210	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RK64_RS07210	PWY-5723	Rubisco shunt
RK64_RS07210	PWY-6891	thiazole biosynthesis II (Bacillus)
RK64_RS07210	PWY-6892	thiazole biosynthesis I (E. coli)
RK64_RS07210	PWY-6901	superpathway of glucose and xylose degradation
RK64_RS07210	PWY-7560	methylerythritol phosphate pathway II
RK64_RS07345	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
RK64_RS07355	PWY-5958	acridone alkaloid biosynthesis
RK64_RS07355	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RK64_RS07355	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RK64_RS07360	PWY-5958	acridone alkaloid biosynthesis
RK64_RS07360	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
RK64_RS07360	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
RK64_RS07485	PWY-2941	L-lysine biosynthesis II
RK64_RS07485	PWY-2942	L-lysine biosynthesis III
RK64_RS07485	PWY-5097	L-lysine biosynthesis VI
RK64_RS07485	PWY-6559	spermidine biosynthesis II
RK64_RS07485	PWY-6562	norspermidine biosynthesis
RK64_RS07485	PWY-7153	grixazone biosynthesis
RK64_RS07490	PWY-2941	L-lysine biosynthesis II
RK64_RS07490	PWY-2942	L-lysine biosynthesis III
RK64_RS07490	PWY-5097	L-lysine biosynthesis VI
RK64_RS07490	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
RK64_RS07490	PWY-6559	spermidine biosynthesis II
RK64_RS07490	PWY-6562	norspermidine biosynthesis
RK64_RS07490	PWY-7153	grixazone biosynthesis
RK64_RS07490	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
RK64_RS07495	PWY-2941	L-lysine biosynthesis II
RK64_RS07495	PWY-2942	L-lysine biosynthesis III
RK64_RS07495	PWY-5097	L-lysine biosynthesis VI
RK64_RS07500	PWY-2941	L-lysine biosynthesis II
RK64_RS07500	PWY-2942	L-lysine biosynthesis III
RK64_RS07500	PWY-5097	L-lysine biosynthesis VI
RK64_RS07505	PWY-2941	L-lysine biosynthesis II
RK64_RS07515	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RK64_RS07520	PWY-2941	L-lysine biosynthesis II
RK64_RS07520	PWY-2942	L-lysine biosynthesis III
RK64_RS07520	PWY-5097	L-lysine biosynthesis VI
RK64_RS07590	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RK64_RS07595	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RK64_RS07625	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
RK64_RS07625	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
RK64_RS07625	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
RK64_RS07625	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
RK64_RS07665	PWY-3841	folate transformations II
RK64_RS07665	PWY-6614	tetrahydrofolate biosynthesis
RK64_RS07670	PWY-3841	folate transformations II
RK64_RS07670	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RK64_RS07670	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RK64_RS07670	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RK64_RS07670	PWY-7199	pyrimidine deoxyribonucleosides salvage
RK64_RS07670	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RK64_RS07755	PWY-6825	phosphatidylcholine biosynthesis V
RK64_RS07865	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RK64_RS07870	PWY-6164	3-dehydroquinate biosynthesis I
RK64_RS07875	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RK64_RS07885	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
RK64_RS07885	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RK64_RS07885	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RK64_RS07885	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RK64_RS07885	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
RK64_RS07885	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RK64_RS07885	PWY-7205	CMP phosphorylation
RK64_RS07885	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RK64_RS07885	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RK64_RS07885	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS07885	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
RK64_RS07885	PWY-7224	purine deoxyribonucleosides salvage
RK64_RS07885	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
RK64_RS07885	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
RK64_RS07895	PWY-5839	menaquinol-7 biosynthesis
RK64_RS07895	PWY-5844	menaquinol-9 biosynthesis
RK64_RS07895	PWY-5849	menaquinol-6 biosynthesis
RK64_RS07895	PWY-5890	menaquinol-10 biosynthesis
RK64_RS07895	PWY-5891	menaquinol-11 biosynthesis
RK64_RS07895	PWY-5892	menaquinol-12 biosynthesis
RK64_RS07895	PWY-5895	menaquinol-13 biosynthesis
RK64_RS07900	PWY-5807	heptaprenyl diphosphate biosynthesis
RK64_RS07915	PWY-5667	CDP-diacylglycerol biosynthesis I
RK64_RS07915	PWY-5981	CDP-diacylglycerol biosynthesis III
RK64_RS07945	PWY-7205	CMP phosphorylation
RK64_RS08085	PWY-3341	L-proline biosynthesis III
RK64_RS08085	PWY-4981	L-proline biosynthesis II (from arginine)
RK64_RS08085	PWY-6344	L-ornithine degradation II (Stickland reaction)
RK64_RS08095	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RK64_RS08165	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
RK64_RS08165	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
RK64_RS08235	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
RK64_RS08235	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
RK64_RS08260	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RK64_RS08310	PWY-2722	trehalose degradation IV
RK64_RS08310	PWY-2723	trehalose degradation V
RK64_RS08310	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
RK64_RS08310	PWY-5661	GDP-glucose biosynthesis
RK64_RS08310	PWY-621	sucrose degradation III (sucrose invertase)
RK64_RS08310	PWY-7238	sucrose biosynthesis II
RK64_RS08310	PWY-7385	1,3-propanediol biosynthesis (engineered)
RK64_RS08340	PWY-6854	ethylene biosynthesis III (microbes)
RK64_RS08415	PWY-6556	pyrimidine ribonucleosides salvage II
RK64_RS08415	PWY-7181	pyrimidine deoxyribonucleosides degradation
RK64_RS08415	PWY-7193	pyrimidine ribonucleosides salvage I
RK64_RS08415	PWY-7199	pyrimidine deoxyribonucleosides salvage
RK64_RS08420	PWY-7039	phosphatidate metabolism, as a signaling molecule
RK64_RS08420	PWY-7817	RK64_RS08420
RK64_RS08460	PWY-2201	folate transformations I
RK64_RS08520	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
RK64_RS08545	PWY-5381	pyridine nucleotide cycling (plants)
RK64_RS08545	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
RK64_RS08545	PWY-7761	RK64_RS08545
RK64_RS08555	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
RK64_RS08570	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RK64_RS08570	PWY-6153	autoinducer AI-2 biosynthesis I
RK64_RS08570	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
RK64_RS08625	PWY-7193	pyrimidine ribonucleosides salvage I
RK64_RS08680	PWY-6823	molybdenum cofactor biosynthesis
RK64_RS08680	PWY-6891	thiazole biosynthesis II (Bacillus)
RK64_RS08680	PWY-6892	thiazole biosynthesis I (E. coli)
RK64_RS08680	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RK64_RS08750	PWY-6605	adenine and adenosine salvage II
RK64_RS08750	PWY-6610	adenine and adenosine salvage IV
RK64_RS08750	PWY-7805	RK64_RS08750
RK64_RS08750	PWY-7807	RK64_RS08750
RK64_RS08755	PWY-7805	RK64_RS08755
RK64_RS08755	PWY-7807	RK64_RS08755
RK64_RS08770	PWY-6700	queuosine biosynthesis
RK64_RS08775	PWY-6700	queuosine biosynthesis
RK64_RS08860	PWY-2161	folate polyglutamylation
RK64_RS08885	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RK64_RS08890	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RK64_RS08890	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RK64_RS08895	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RK64_RS08895	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RK64_RS08900	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RK64_RS08900	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
RK64_RS08910	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RK64_RS08995	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS08995	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS08995	PWY-6901	superpathway of glucose and xylose degradation
RK64_RS08995	PWY-7003	glycerol degradation to butanol
RK64_RS09000	PWY-7851	RK64_RS09000
RK64_RS09035	PWY-5913	TCA cycle VI (obligate autotrophs)
RK64_RS09035	PWY-6549	L-glutamine biosynthesis III
RK64_RS09035	PWY-6728	methylaspartate cycle
RK64_RS09035	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RK64_RS09035	PWY-7124	ethylene biosynthesis V (engineered)
RK64_RS09035	PWY-7254	TCA cycle VII (acetate-producers)
RK64_RS09035	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
RK64_RS09055	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS09055	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RK64_RS09055	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS09055	PWY-5723	Rubisco shunt
RK64_RS09055	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RK64_RS09055	PWY-6886	1-butanol autotrophic biosynthesis
RK64_RS09055	PWY-6901	superpathway of glucose and xylose degradation
RK64_RS09055	PWY-7003	glycerol degradation to butanol
RK64_RS09055	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RK64_RS09055	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RK64_RS09060	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS09060	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RK64_RS09060	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS09060	PWY-7385	1,3-propanediol biosynthesis (engineered)
RK64_RS09065	PWY-6679	jadomycin biosynthesis
RK64_RS09065	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RK64_RS09070	PWY-6679	jadomycin biosynthesis
RK64_RS09070	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RK64_RS09085	PWY-7805	RK64_RS09085
RK64_RS09085	PWY-7807	RK64_RS09085
RK64_RS09095	PWY-1281	sulfoacetaldehyde degradation I
RK64_RS09095	PWY-5482	pyruvate fermentation to acetate II
RK64_RS09095	PWY-5485	pyruvate fermentation to acetate IV
RK64_RS09095	PWY-5497	purine nucleobases degradation II (anaerobic)
RK64_RS09095	PWY-6637	sulfolactate degradation II
RK64_RS09130	PWY-5482	pyruvate fermentation to acetate II
RK64_RS09130	PWY-5485	pyruvate fermentation to acetate IV
RK64_RS09130	PWY-5497	purine nucleobases degradation II (anaerobic)
RK64_RS09155	PWY-6823	molybdenum cofactor biosynthesis
RK64_RS09155	PWY-6891	thiazole biosynthesis II (Bacillus)
RK64_RS09155	PWY-6892	thiazole biosynthesis I (E. coli)
RK64_RS09155	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
RK64_RS09200	PWY-6832	2-aminoethylphosphonate degradation II
RK64_RS09260	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
RK64_RS09260	PWY-2161	folate polyglutamylation
RK64_RS09260	PWY-2201	folate transformations I
RK64_RS09260	PWY-3841	folate transformations II
RK64_RS09290	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
RK64_RS09290	PWY-3461	L-tyrosine biosynthesis II
RK64_RS09290	PWY-3462	L-phenylalanine biosynthesis II
RK64_RS09290	PWY-6120	L-tyrosine biosynthesis III
RK64_RS09290	PWY-6164	3-dehydroquinate biosynthesis I
RK64_RS09290	PWY-6627	salinosporamide A biosynthesis
RK64_RS09290	PWY-7626	bacilysin biosynthesis
RK64_RS09290	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
RK64_RS09310	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RK64_RS09310	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RK64_RS09455	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
RK64_RS09455	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RK64_RS09460	PWY-6167	flavin biosynthesis II (archaea)
RK64_RS09460	PWY-6168	flavin biosynthesis III (fungi)
RK64_RS09465	PWY-6167	flavin biosynthesis II (archaea)
RK64_RS09465	PWY-6168	flavin biosynthesis III (fungi)
RK64_RS09465	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
RK64_RS09470	PWY-6167	flavin biosynthesis II (archaea)
RK64_RS09470	PWY-6168	flavin biosynthesis III (fungi)
RK64_RS09470	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS09475	PWY-5525	D-glucuronate degradation I
RK64_RS09530	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RK64_RS09530	PWY-5723	Rubisco shunt
RK64_RS09565	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
RK64_RS09565	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
RK64_RS09570	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RK64_RS09570	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
RK64_RS09585	PWY-6502	oxidized GTP and dGTP detoxification
RK64_RS09595	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS09595	PWY-1622	formaldehyde assimilation I (serine pathway)
RK64_RS09595	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
RK64_RS09595	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS09595	PWY-5723	Rubisco shunt
RK64_RS09595	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RK64_RS09595	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RK64_RS09595	PWY-6886	1-butanol autotrophic biosynthesis
RK64_RS09595	PWY-6901	superpathway of glucose and xylose degradation
RK64_RS09595	PWY-7003	glycerol degradation to butanol
RK64_RS09595	PWY-7124	ethylene biosynthesis V (engineered)
RK64_RS09595	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
RK64_RS09600	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
RK64_RS09880	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RK64_RS09890	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
RK64_RS09890	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
RK64_RS09890	PWY-7766	RK64_RS09890
RK64_RS09995	PWY-5392	reductive TCA cycle II
RK64_RS09995	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
RK64_RS09995	PWY-5690	TCA cycle II (plants and fungi)
RK64_RS09995	PWY-5913	TCA cycle VI (obligate autotrophs)
RK64_RS09995	PWY-6728	methylaspartate cycle
RK64_RS09995	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
RK64_RS09995	PWY-7254	TCA cycle VII (acetate-producers)
RK64_RS09995	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
RK64_RS10025	PWY-6004	glycine betaine biosynthesis V (from glycine)
RK64_RS10030	PWY-6700	queuosine biosynthesis
RK64_RS10225	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
RK64_RS10355	PWY-7799	RK64_RS10355
RK64_RS10355	PWY-7800	RK64_RS10355
RK64_RS10450	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
RK64_RS10490	PWY-6123	inosine-5'-phosphate biosynthesis I
RK64_RS10490	PWY-6124	inosine-5'-phosphate biosynthesis II
RK64_RS10490	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS10490	PWY-7234	inosine-5'-phosphate biosynthesis III
RK64_RS10525	PWY-5381	pyridine nucleotide cycling (plants)
RK64_RS10535	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
RK64_RS10560	PWY-7805	RK64_RS10560
RK64_RS10560	PWY-7807	RK64_RS10560
RK64_RS10845	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RK64_RS10845	PWY-5368	dimorphecolate biosynthesis
RK64_RS10845	PWY-5995	linoleate biosynthesis I (plants)
RK64_RS10845	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RK64_RS10845	PWY-6803	phosphatidylcholine acyl editing
RK64_RS10845	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RK64_RS10845	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RK64_RS10845	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RK64_RS10845	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RK64_RS10845	PWY-7470	phosphatidylcholine biosynthesis VII
RK64_RS10845	PWY-7618	ricinoleate biosynthesis
RK64_RS10855	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
RK64_RS10855	PWY-5368	dimorphecolate biosynthesis
RK64_RS10855	PWY-5995	linoleate biosynthesis I (plants)
RK64_RS10855	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
RK64_RS10855	PWY-6803	phosphatidylcholine acyl editing
RK64_RS10855	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
RK64_RS10855	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
RK64_RS10855	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
RK64_RS10855	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
RK64_RS10855	PWY-7470	phosphatidylcholine biosynthesis VII
RK64_RS10855	PWY-7618	ricinoleate biosynthesis
RK64_RS10870	PWY-5101	L-isoleucine biosynthesis II
RK64_RS10870	PWY-5103	L-isoleucine biosynthesis III
RK64_RS10870	PWY-5104	L-isoleucine biosynthesis IV
RK64_RS10870	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RK64_RS10875	PWY-5101	L-isoleucine biosynthesis II
RK64_RS10875	PWY-5103	L-isoleucine biosynthesis III
RK64_RS10875	PWY-5104	L-isoleucine biosynthesis IV
RK64_RS10875	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RK64_RS10875	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RK64_RS10875	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RK64_RS10875	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RK64_RS10885	PWY-5103	L-isoleucine biosynthesis III
RK64_RS10885	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RK64_RS10890	PWY-6871	3-methylbutanol biosynthesis
RK64_RS10895	PWY-7396	butanol and isobutanol biosynthesis (engineered)
RK64_RS10990	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RK64_RS10995	PWY-6012	acyl carrier protein metabolism I
RK64_RS10995	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
RK64_RS11050	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RK64_RS11050	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RK64_RS11055	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RK64_RS11055	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RK64_RS11110	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
RK64_RS11110	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
RK64_RS11110	PWY-6897	thiamin salvage II
RK64_RS11110	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
RK64_RS11110	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
RK64_RS11110	PWY-7356	thiamin salvage IV (yeast)
RK64_RS11110	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RK64_RS11115	PWY-6897	thiamin salvage II
RK64_RS11115	PWY-7356	thiamin salvage IV (yeast)
RK64_RS11115	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RK64_RS11120	PWY-6910	hydroxymethylpyrimidine salvage
RK64_RS11120	PWY-7356	thiamin salvage IV (yeast)
RK64_RS11120	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
RK64_RS11125	PWY-6899	base-degraded thiamin salvage
RK64_RS11125	PWY-7356	thiamin salvage IV (yeast)
RK64_RS11145	PWY-5971	palmitate biosynthesis II (bacteria and plants)
RK64_RS11145	PWY-5973	<i>cis</i>-vaccenate biosynthesis
RK64_RS11145	PWY-5989	stearate biosynthesis II (bacteria and plants)
RK64_RS11145	PWY-5994	palmitate biosynthesis I (animals and fungi)
RK64_RS11145	PWY-6113	superpathway of mycolate biosynthesis
RK64_RS11145	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
RK64_RS11145	PWY-6519	8-amino-7-oxononanoate biosynthesis I
RK64_RS11145	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
RK64_RS11145	PWY-7663	gondoate biosynthesis (anaerobic)
RK64_RS11145	PWY-7664	oleate biosynthesis IV (anaerobic)
RK64_RS11145	PWY-7858	RK64_RS11145
RK64_RS11145	PWYG-321	mycolate biosynthesis
RK64_RS11150	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RK64_RS11150	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RK64_RS11170	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS11180	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS11215	PWY-7183	pyrimidine nucleobases salvage I
RK64_RS11220	PWY-1622	formaldehyde assimilation I (serine pathway)
RK64_RS11220	PWY-181	photorespiration
RK64_RS11220	PWY-2161	folate polyglutamylation
RK64_RS11220	PWY-2201	folate transformations I
RK64_RS11220	PWY-3661	glycine betaine degradation I
RK64_RS11220	PWY-3661-1	glycine betaine degradation II (mammalian)
RK64_RS11220	PWY-3841	folate transformations II
RK64_RS11220	PWY-5497	purine nucleobases degradation II (anaerobic)
RK64_RS11250	PWY-7199	pyrimidine deoxyribonucleosides salvage
RK64_RS11265	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS11280	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
RK64_RS11280	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
RK64_RS11285	PWY-1042	glycolysis IV (plant cytosol)
RK64_RS11285	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RK64_RS11285	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS11285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
RK64_RS11285	PWY-7385	1,3-propanediol biosynthesis (engineered)
RK64_RS11295	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
RK64_RS11295	PWY-7177	UTP and CTP dephosphorylation II
RK64_RS11295	PWY-7185	UTP and CTP dephosphorylation I
RK64_RS11310	PWY-3961	phosphopantothenate biosynthesis II
RK64_RS11330	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
RK64_RS11330	PWY-6153	autoinducer AI-2 biosynthesis I
RK64_RS11330	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
RK64_RS11340	PWY-7181	pyrimidine deoxyribonucleosides degradation
RK64_RS11350	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
RK64_RS11355	PWY-4202	arsenate detoxification I (glutaredoxin)
RK64_RS11355	PWY-5532	adenosine nucleotides degradation IV
RK64_RS11355	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
RK64_RS11355	PWY-6608	guanosine nucleotides degradation III
RK64_RS11355	PWY-6609	adenine and adenosine salvage III
RK64_RS11355	PWY-6611	adenine and adenosine salvage V
RK64_RS11355	PWY-6620	guanine and guanosine salvage
RK64_RS11355	PWY-6627	salinosporamide A biosynthesis
RK64_RS11355	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
RK64_RS11355	PWY-7179	purine deoxyribonucleosides degradation I
RK64_RS11355	PWY-7179-1	purine deoxyribonucleosides degradation
RK64_RS11380	PWY-3861	mannitol degradation II
RK64_RS11380	PWY-3881	mannitol biosynthesis
RK64_RS11380	PWY-5659	GDP-mannose biosynthesis
RK64_RS11380	PWY-6992	1,5-anhydrofructose degradation
RK64_RS11380	PWY-7456	mannan degradation
RK64_RS11380	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
RK64_RS11380	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
RK64_RS11440	PWY-6749	CMP-legionaminate biosynthesis I
RK64_RS11445	PWY-5723	Rubisco shunt
RK64_RS11460	PWY-6531	mannitol cycle
RK64_RS11470	PWY-6749	CMP-legionaminate biosynthesis I
RK64_RS11485	PWY-31	canavanine degradation
RK64_RS11485	PWY-4984	urea cycle
RK64_RS11485	PWY-6305	putrescine biosynthesis IV
RK64_RS11485	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
RK64_RS11620	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
RK64_RS11685	PWY-6619	adenine and adenosine salvage VI
RK64_RS11695	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
RK64_RS11695	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
RK64_RS11700	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
RK64_RS11700	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
RK64_RS11770	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RK64_RS11775	PWY-5101	L-isoleucine biosynthesis II
RK64_RS11775	PWY-5103	L-isoleucine biosynthesis III
RK64_RS11775	PWY-5104	L-isoleucine biosynthesis IV
RK64_RS11775	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
RK64_RS11775	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
RK64_RS11775	PWY-6389	(<i>S</i>)-acetoin biosynthesis
RK64_RS11775	PWY-7111	pyruvate fermentation to isobutanol (engineered)
RK64_RS11875	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
RK64_RS12100	PWY-5964	guanylyl molybdenum cofactor biosynthesis
RK64_RS12100	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
RK64_RS12110	PWY-6823	molybdenum cofactor biosynthesis
RK64_RS12120	PWY-6823	molybdenum cofactor biosynthesis
RK64_RS12190	PWY-5704	urea degradation II
RK64_RS12195	PWY-5704	urea degradation II
RK64_RS12200	PWY-5704	urea degradation II
RK64_RS12310	PWY-1881	formate oxidation to CO<sub>2</sub>
RK64_RS12310	PWY-5497	purine nucleobases degradation II (anaerobic)
RK64_RS12310	PWY-6696	oxalate degradation III
RK64_RS12420	PWY-5028	L-histidine degradation II
RK64_RS12420	PWY-5030	L-histidine degradation III
RK64_RS12425	PWY-5028	L-histidine degradation II
RK64_RS12425	PWY-5030	L-histidine degradation III
RK64_RS12450	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
RK64_RS12450	PWY-5723	Rubisco shunt
RK64_RS12460	PWY-6317	galactose degradation I (Leloir pathway)
RK64_RS12505	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
RK64_RS12505	PWY-6174	mevalonate pathway II (archaea)
RK64_RS12505	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
RK64_RS12505	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
RK64_RS12505	PWY-7102	bisabolene biosynthesis
RK64_RS12505	PWY-7391	isoprene biosynthesis II (engineered)
RK64_RS12505	PWY-7524	mevalonate pathway III (archaea)
RK64_RS12505	PWY-7560	methylerythritol phosphate pathway II
RK64_RS12505	PWY-922	mevalonate pathway I
RK64_RS12615	PWY-7254	TCA cycle VII (acetate-producers)
RK64_RS12650	PWY-101	photosynthesis light reactions
RK64_RS12660	PWY-3781	aerobic respiration I (cytochrome c)
RK64_RS12660	PWY-4521	arsenite oxidation I (respiratory)
RK64_RS12660	PWY-6692	Fe(II) oxidation
RK64_RS12660	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
RK64_RS12700	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
RK64_RS12700	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
RK64_RS12785	PWY-5194	siroheme biosynthesis
RK64_RS12785	PWY-5196	factor 430 biosynthesis
RK64_RS12785	PWY-5441	S-methyl-L-methionine cycle
RK64_RS12785	PWY-702	L-methionine biosynthesis II
RK64_RS12785	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RK64_RS12795	PWY-6683	sulfate reduction III (assimilatory)
RK64_RS12800	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
RK64_RS12895	PWY-1622	formaldehyde assimilation I (serine pathway)
RK64_RS12895	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS12945	PWY-6578	8-amino-7-oxononanoate biosynthesis III
RK64_RS12955	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RK64_RS12965	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
RK64_RS13075	PWY-6654	phosphopantothenate biosynthesis III
RK64_RS13075	PWY-7862	RK64_RS13075
RK64_RS13340	PWY-6749	CMP-legionaminate biosynthesis I
RK64_RS13385	PWY-3801	sucrose degradation II (sucrose synthase)
RK64_RS13385	PWY-6527	stachyose degradation
RK64_RS13385	PWY-7238	sucrose biosynthesis II
RK64_RS13385	PWY-7343	UDP-glucose biosynthesis
RK64_RS13385	PWY-7817	RK64_RS13385
RK64_RS13415	PWY-4261	glycerol degradation I
RK64_RS13415	PWY-5530	sorbitol biosynthesis II
RK64_RS13490	PWY-5484	glycolysis II (from fructose 6-phosphate)
RK64_RS13660	PWY-6174	mevalonate pathway II (archaea)
RK64_RS13660	PWY-7391	isoprene biosynthesis II (engineered)
RK64_RS13660	PWY-7524	mevalonate pathway III (archaea)
RK64_RS13660	PWY-922	mevalonate pathway I
RK64_RS13665	PWY-6174	mevalonate pathway II (archaea)
RK64_RS13665	PWY-7391	isoprene biosynthesis II (engineered)
RK64_RS13665	PWY-7524	mevalonate pathway III (archaea)
RK64_RS13665	PWY-7571	ferrichrome A biosynthesis
RK64_RS13665	PWY-922	mevalonate pathway I
RK64_RS13710	PWY-6853	ethylene biosynthesis II (microbes)
RK64_RS13890	PWY-5686	UMP biosynthesis
RK64_RS14195	PWY-3841	folate transformations II
RK64_RS14195	PWY-6614	tetrahydrofolate biosynthesis
RK64_RS14200	PWY-3841	folate transformations II
RK64_RS14200	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
RK64_RS14200	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
RK64_RS14200	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
RK64_RS14200	PWY-7199	pyrimidine deoxyribonucleosides salvage
RK64_RS14200	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
