RK64_RS00015 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain RK64_RS00200 SM00382 ATPases associated with a variety of cellular activities RK64_RS00205 SM00387 Histidine kinase-like ATPases RK64_RS00210 SM00448 cheY-homologous receiver domain RK64_RS00210 SM00862 Transcriptional regulatory protein, C terminal RK64_RS00220 SM00098 Alkaline phosphatase homologues RK64_RS00230 SM00347 helix_turn_helix multiple antibiotic resistance protein RK64_RS00315 SM00047 Lysozyme subfamily 2 RK64_RS00340 SM00957 SecA DEAD-like domain RK64_RS00340 SM00958 SecA preprotein cross-linking domain RK64_RS00370 SM00903 Flavin reductase like domain RK64_RS00390 SM00903 Flavin reductase like domain RK64_RS00515 SM00382 ATPases associated with a variety of cellular activities RK64_RS00530 SM00867 YceI-like domain RK64_RS00540 SM00450 Rhodanese Homology Domain RK64_RS00595 SM00382 ATPases associated with a variety of cellular activities RK64_RS00630 SM00357 Cold shock protein domain RK64_RS00635 SM00530 Helix-turn-helix XRE-family like proteins RK64_RS00650 SM00470 ParB-like nuclease domain RK64_RS00660 SM01228 RK64_RS00660 RK64_RS00680 SM00382 ATPases associated with a variety of cellular activities RK64_RS00680 SM00760 Bacterial dnaA protein helix-turn-helix domain RK64_RS00685 SM00480 DNA polymerase III beta subunit RK64_RS00700 SM00387 Histidine kinase-like ATPases RK64_RS00700 SM00433 TopoisomeraseII RK64_RS00705 SM00434 DNA Topoisomerase IV RK64_RS00750 SM00267 diguanylate cyclase RK64_RS00770 SM00788 Adenylosuccinate synthetase RK64_RS00785 SM00448 cheY-homologous receiver domain RK64_RS00785 SM00862 Transcriptional regulatory protein, C terminal RK64_RS00790 SM00091 PAS domain RK64_RS00790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RK64_RS00790 SM00387 Histidine kinase-like ATPases RK64_RS00790 SM00388 His Kinase A (phosphoacceptor) domain RK64_RS00805 SM00849 Metallo-beta-lactamase superfamily RK64_RS00855 SM00450 Rhodanese Homology Domain RK64_RS00860 SM00450 Rhodanese Homology Domain RK64_RS00860 SM00849 Metallo-beta-lactamase superfamily RK64_RS00935 SM00148 Phospholipase C, catalytic domain (part); domain X RK64_RS00960 SM00342 helix_turn_helix, arabinose operon control protein RK64_RS00990 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK64_RS01005 SM00257 Lysin motif RK64_RS01015 SM00347 helix_turn_helix multiple antibiotic resistance protein RK64_RS01075 SM00470 ParB-like nuclease domain RK64_RS01095 SM00822 RK64_RS01095 RK64_RS01140 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK64_RS01160 SM01133 RK64_RS01160 RK64_RS01180 SM00382 ATPases associated with a variety of cellular activities RK64_RS01185 SM00062 Bacterial periplasmic substrate-binding proteins RK64_RS01300 SM00984 UDP binding domain RK64_RS01340 SM00382 ATPases associated with a variety of cellular activities RK64_RS01400 SM00859 Semialdehyde dehydrogenase, NAD binding domain RK64_RS01480 SM00382 ATPases associated with a variety of cellular activities RK64_RS01520 SM00382 ATPases associated with a variety of cellular activities RK64_RS01565 SM00342 helix_turn_helix, arabinose operon control protein RK64_RS01565 SM00448 cheY-homologous receiver domain RK64_RS01635 SM00882 Coenzyme A transferase RK64_RS01720 SM00829 Enoylreductase RK64_RS01730 SM00829 Enoylreductase RK64_RS01780 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RK64_RS01780 SM00387 Histidine kinase-like ATPases RK64_RS01785 SM00448 cheY-homologous receiver domain RK64_RS01785 SM00850 LytTr DNA-binding domain RK64_RS01800 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK64_RS01800 SM00866 RK64_RS01800 RK64_RS01850 SM00354 helix_turn _helix lactose operon repressor RK64_RS01885 SM00382 ATPases associated with a variety of cellular activities RK64_RS02105 SM00382 ATPases associated with a variety of cellular activities RK64_RS02140 SM01130 RK64_RS02140 RK64_RS02195 SM00506 Appr-1"-p processing enzyme RK64_RS02240 SM00347 helix_turn_helix multiple antibiotic resistance protein RK64_RS02320 SM00530 Helix-turn-helix XRE-family like proteins RK64_RS02330 SM00382 ATPases associated with a variety of cellular activities RK64_RS02380 SM00470 ParB-like nuclease domain RK64_RS02470 SM00855 Phosphoglycerate mutase family RK64_RS02545 SM00116 Domain in cystathionine beta-synthase and other proteins. RK64_RS02545 SM01240 RK64_RS02545 RK64_RS02710 SM00833 Cobalamin synthesis protein cobW C-terminal domain RK64_RS02755 SM00014 Acid phosphatase homologues RK64_RS02785 SM00382 ATPases associated with a variety of cellular activities RK64_RS02785 SM00930 RK64_RS02785 RK64_RS02800 SM00257 Lysin motif RK64_RS02855 SM00642 Alpha-amylase domain RK64_RS02860 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK64_RS02860 SM00866 RK64_RS02860 RK64_RS02880 SM00382 ATPases associated with a variety of cellular activities RK64_RS02890 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RK64_RS02890 SM00493 RK64_RS02890 RK64_RS02955 SM00465 GIY-YIG type nucleases (URI domain) RK64_RS02975 SM00493 RK64_RS02975 RK64_RS02980 SM00650 Ribosomal RNA adenine dimethylases RK64_RS03020 SM01400 RK64_RS03020 RK64_RS03040 SM00487 DEAD-like helicases superfamily RK64_RS03040 SM00490 helicase superfamily c-terminal domain RK64_RS03040 SM00982 RK64_RS03040 RK64_RS03040 SM01058 CarD-like/TRCF domain RK64_RS03055 SM00363 S4 RNA-binding domain RK64_RS03065 SM00316 Ribosomal protein S1-like RNA-binding domain RK64_RS03070 SM00977 TilS substrate C-terminal domain RK64_RS03080 SM00382 ATPases associated with a variety of cellular activities RK64_RS03100 SM00905 Dihydroneopterin aldolase RK64_RS03200 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK64_RS03235 SM00382 ATPases associated with a variety of cellular activities RK64_RS03235 SM01086 C-terminal, D2-small domain, of ClpB protein RK64_RS03240 SM00382 ATPases associated with a variety of cellular activities RK64_RS03245 SM00670 Large family of predicted nucleotide-binding domains RK64_RS03265 SM00840 RK64_RS03265 RK64_RS03270 SM00535 Ribonuclease III family RK64_RS03275 SM00967 RNA 2'-O ribose methyltransferase substrate binding RK64_RS03300 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. RK64_RS03300 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RK64_RS03305 SM00649 Ribosomal protein L11/L12 RK64_RS03340 SM00663 RNA polymerase I subunit A N-terminus RK64_RS03360 SM00838 Elongation factor G C-terminus RK64_RS03360 SM00889 Elongation factor G, domain IV RK64_RS03480 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RK64_RS03535 SM00986 Uracil DNA glycosylase superfamily RK64_RS03535 SM00987 UreE urease accessory protein, C-terminal domain RK64_RS03710 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK64_RS03720 SM00829 Enoylreductase RK64_RS03735 SM00836 DALR anticodon binding domain RK64_RS03735 SM01016 Arginyl tRNA synthetase N terminal dom RK64_RS03745 SM00478 endonuclease III RK64_RS03860 SM00382 ATPases associated with a variety of cellular activities RK64_RS03865 SM00529 Helix-turn-helix diphteria tox regulatory element RK64_RS03865 SM00899 RK64_RS03865 RK64_RS03880 SM00382 ATPases associated with a variety of cellular activities RK64_RS03910 SM00382 ATPases associated with a variety of cellular activities RK64_RS03930 SM00382 ATPases associated with a variety of cellular activities RK64_RS03950 SM01120 RK64_RS03950 RK64_RS03995 SM00448 cheY-homologous receiver domain RK64_RS03995 SM00862 Transcriptional regulatory protein, C terminal RK64_RS04000 SM00387 Histidine kinase-like ATPases RK64_RS04005 SM00382 ATPases associated with a variety of cellular activities RK64_RS04025 SM00257 Lysin motif RK64_RS04035 SM00342 helix_turn_helix, arabinose operon control protein RK64_RS04125 SM00382 ATPases associated with a variety of cellular activities RK64_RS04130 SM00382 ATPases associated with a variety of cellular activities RK64_RS04135 SM00347 helix_turn_helix multiple antibiotic resistance protein RK64_RS04140 SM00833 Cobalamin synthesis protein cobW C-terminal domain RK64_RS04195 SM00420 helix_turn_helix, Deoxyribose operon repressor RK64_RS04195 SM01134 RK64_RS04195 RK64_RS04215 SM01091 Transporter associated domain RK64_RS04230 SM00387 Histidine kinase-like ATPases RK64_RS04230 SM00388 His Kinase A (phosphoacceptor) domain RK64_RS04235 SM00448 cheY-homologous receiver domain RK64_RS04235 SM00862 Transcriptional regulatory protein, C terminal RK64_RS04290 SM00796 Allophanate hydrolase subunit 1 RK64_RS04295 SM00797 Allophanate hydrolase subunit 2 RK64_RS04305 SM00382 ATPases associated with a variety of cellular activities RK64_RS04310 SM00341 Helicase and RNase D C-terminal RK64_RS04310 SM00487 DEAD-like helicases superfamily RK64_RS04310 SM00490 helicase superfamily c-terminal domain RK64_RS04310 SM00956 RK64_RS04310 RK64_RS04315 SM00382 ATPases associated with a variety of cellular activities RK64_RS04340 SM00046 Diacylglycerol kinase catalytic domain (presumed) RK64_RS04410 SM00382 ATPases associated with a variety of cellular activities RK64_RS04465 SM00267 diguanylate cyclase RK64_RS04485 SM00487 DEAD-like helicases superfamily RK64_RS04485 SM00490 helicase superfamily c-terminal domain RK64_RS04500 SM00957 SecA DEAD-like domain RK64_RS04500 SM00958 SecA preprotein cross-linking domain RK64_RS04520 SM00257 Lysin motif RK64_RS04535 SM00487 DEAD-like helicases superfamily RK64_RS04535 SM00490 helicase superfamily c-terminal domain RK64_RS04560 SM00028 Tetratricopeptide repeats RK64_RS04615 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RK64_RS04635 SM01192 RK64_RS04635 RK64_RS04635 SM01193 RK64_RS04635 RK64_RS04655 SM00316 Ribosomal protein S1-like RNA-binding domain RK64_RS04655 SM00357 Cold shock protein domain RK64_RS04655 SM00955 RK64_RS04655 RK64_RS04725 SM00318 Staphylococcal nuclease homologues RK64_RS04730 SM00357 Cold shock protein domain RK64_RS04770 SM00855 Phosphoglycerate mutase family RK64_RS04830 SM00493 RK64_RS04830 RK64_RS04840 SM00382 ATPases associated with a variety of cellular activities RK64_RS04840 SM00930 RK64_RS04840 RK64_RS04865 SM00382 ATPases associated with a variety of cellular activities RK64_RS04935 SM00729 Elongator protein 3, MiaB family, Radical SAM RK64_RS05080 SM01298 RK64_RS05080 RK64_RS05090 SM00316 Ribosomal protein S1-like RNA-binding domain RK64_RS05105 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RK64_RS05190 SM00382 ATPases associated with a variety of cellular activities RK64_RS05190 SM01086 C-terminal, D2-small domain, of ClpB protein RK64_RS05235 SM00825 Beta-ketoacyl synthase RK64_RS05255 SM00382 ATPases associated with a variety of cellular activities RK64_RS05260 SM00382 ATPases associated with a variety of cellular activities RK64_RS05275 SM00382 ATPases associated with a variety of cellular activities RK64_RS05280 SM00382 ATPases associated with a variety of cellular activities RK64_RS05330 SM01118 RK64_RS05330 RK64_RS05340 SM00954 Region found in RelA / SpoT proteins RK64_RS05355 SM00116 Domain in cystathionine beta-synthase and other proteins. RK64_RS05355 SM00924 MgtE intracellular N domain RK64_RS05420 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RK64_RS05450 SM00914 RK64_RS05450 RK64_RS05495 SM00382 ATPases associated with a variety of cellular activities RK64_RS05595 SM00347 helix_turn_helix multiple antibiotic resistance protein RK64_RS05605 SM00047 Lysozyme subfamily 2 RK64_RS05605 SM00644 RK64_RS05605 RK64_RS05665 SM01001 AIR carboxylase RK64_RS05685 SM01211 RK64_RS05685 RK64_RS05710 SM00798 AICARFT/IMPCHase bienzyme RK64_RS05710 SM00851 MGS-like domain RK64_RS05715 SM01209 RK64_RS05715 RK64_RS05715 SM01210 RK64_RS05715 RK64_RS05725 SM00382 ATPases associated with a variety of cellular activities RK64_RS05795 SM00849 Metallo-beta-lactamase superfamily RK64_RS05825 SM00861 Transketolase, pyrimidine binding domain RK64_RS05845 SM00530 Helix-turn-helix XRE-family like proteins RK64_RS05850 SM00382 ATPases associated with a variety of cellular activities RK64_RS05900 SM00838 Elongation factor G C-terminus RK64_RS05925 SM00878 Biotin carboxylase C-terminal domain RK64_RS06005 SM00725 NEAr Transporter domain RK64_RS06010 SM00725 NEAr Transporter domain RK64_RS06015 SM00725 NEAr Transporter domain RK64_RS06055 SM00967 RNA 2'-O ribose methyltransferase substrate binding RK64_RS06065 SM00873 B3/4 domain RK64_RS06065 SM00874 tRNA synthetase B5 domain RK64_RS06065 SM00896 Ferredoxin-fold anticodon binding domain RK64_RS06090 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RK64_RS06090 SM00481 DNA polymerase alpha chain like domain RK64_RS06090 SM00483 DNA polymerase X family RK64_RS06095 SM00463 Small MutS-related domain RK64_RS06095 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RK64_RS06095 SM00534 ATPase domain of DNA mismatch repair MUTS family RK64_RS06110 SM00465 GIY-YIG type nucleases (URI domain) RK64_RS06305 SM00740 RK64_RS06305 RK64_RS06325 SM00842 Cell division protein FtsA RK64_RS06330 SM00864 Tubulin/FtsZ family, GTPase domain RK64_RS06330 SM00865 Tubulin/FtsZ family, C-terminal domain RK64_RS06355 SM00363 S4 RNA-binding domain RK64_RS06390 SM00363 S4 RNA-binding domain RK64_RS06415 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain RK64_RS06420 SM00851 MGS-like domain RK64_RS06420 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RK64_RS06420 SM01209 RK64_RS06420 RK64_RS06425 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family RK64_RS06450 SM00072 Guanylate kinase homologues. RK64_RS06455 SM01409 RK64_RS06455 RK64_RS06465 SM00487 DEAD-like helicases superfamily RK64_RS06465 SM00490 helicase superfamily c-terminal domain RK64_RS06500 SM00331 Sigma factor PP2C-like phosphatases RK64_RS06500 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain RK64_RS06505 SM00220 Serine/Threonine protein kinases, catalytic domain RK64_RS06505 SM00740 RK64_RS06505 RK64_RS06520 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain RK64_RS06535 SM01120 RK64_RS06535 RK64_RS06535 SM01121 RK64_RS06535 RK64_RS06540 SM00487 DEAD-like helicases superfamily RK64_RS06540 SM00490 helicase superfamily c-terminal domain RK64_RS06555 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. RK64_RS06560 SM00822 RK64_RS06560 RK64_RS06575 SM00358 Double-stranded RNA binding motif RK64_RS06575 SM00535 Ribonuclease III family RK64_RS06580 SM00968 SMC proteins Flexible Hinge Domain RK64_RS06585 SM00382 ATPases associated with a variety of cellular activities RK64_RS06585 SM00962 SRP54-type protein, GTPase domain RK64_RS06585 SM00963 SRP54-type protein, helical bundle domain RK64_RS06595 SM00382 ATPases associated with a variety of cellular activities RK64_RS06595 SM00962 SRP54-type protein, GTPase domain RK64_RS06595 SM00963 SRP54-type protein, helical bundle domain RK64_RS06640 SM00881 CoA binding domain RK64_RS06645 SM00257 Lysin motif RK64_RS06660 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RK64_RS06660 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RK64_RS06660 SM00493 RK64_RS06660 RK64_RS06680 SM00382 ATPases associated with a variety of cellular activities RK64_RS06680 SM01086 C-terminal, D2-small domain, of ClpB protein RK64_RS06740 SM00479 RK64_RS06740 RK64_RS06740 SM00481 DNA polymerase alpha chain like domain RK64_RS06755 SM00316 Ribosomal protein S1-like RNA-binding domain RK64_RS06755 SM00322 K homology RNA-binding domain RK64_RS06785 SM00904 Riboflavin kinase RK64_RS06790 SM01387 RK64_RS06790 RK64_RS06795 SM00316 Ribosomal protein S1-like RNA-binding domain RK64_RS06795 SM00322 K homology RNA-binding domain RK64_RS06805 SM00849 Metallo-beta-lactamase superfamily RK64_RS06810 SM00382 ATPases associated with a variety of cellular activities RK64_RS06810 SM00843 RK64_RS06810 RK64_RS06815 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK64_RS06815 SM00866 RK64_RS06815 RK64_RS06840 SM00530 Helix-turn-helix XRE-family like proteins RK64_RS06850 SM00852 Probable molybdopterin binding domain RK64_RS06855 SM00382 ATPases associated with a variety of cellular activities RK64_RS06860 SM00322 K homology RNA-binding domain RK64_RS06860 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK64_RS06890 SM00729 Elongator protein 3, MiaB family, Radical SAM RK64_RS06905 SM00533 DNA-binding domain of DNA mismatch repair MUTS family RK64_RS06905 SM00534 ATPase domain of DNA mismatch repair MUTS family RK64_RS06910 SM00853 MutL C terminal dimerisation domain RK64_RS06910 SM01340 RK64_RS06910 RK64_RS06965 SM00422 helix_turn_helix, mercury resistance RK64_RS06970 SM01230 RK64_RS06970 RK64_RS07080 SM00155 Phospholipase D. Active site motifs. RK64_RS07085 SM00382 ATPases associated with a variety of cellular activities RK64_RS07100 SM00421 helix_turn_helix, Lux Regulon RK64_RS07100 SM00448 cheY-homologous receiver domain RK64_RS07110 SM00318 Staphylococcal nuclease homologues RK64_RS07165 SM01060 RK64_RS07165 RK64_RS07180 SM01240 RK64_RS07180 RK64_RS07210 SM00861 Transketolase, pyrimidine binding domain RK64_RS07280 SM01207 RK64_RS07280 RK64_RS07285 SM00387 Histidine kinase-like ATPases RK64_RS07285 SM00433 TopoisomeraseII RK64_RS07290 SM00434 DNA Topoisomerase IV RK64_RS07305 SM01061 CAT RNA binding domain RK64_RS07410 SM00382 ATPases associated with a variety of cellular activities RK64_RS07415 SM00382 ATPases associated with a variety of cellular activities RK64_RS07450 SM00382 ATPases associated with a variety of cellular activities RK64_RS07480 SM00382 ATPases associated with a variety of cellular activities RK64_RS07490 SM00859 Semialdehyde dehydrogenase, NAD binding domain RK64_RS07495 SM01130 RK64_RS07495 RK64_RS07515 SM01005 Alanine racemase, C-terminal domain RK64_RS07530 SM00357 Cold shock protein domain RK64_RS07570 SM00327 von Willebrand factor (vWF) type A domain RK64_RS07595 SM00861 Transketolase, pyrimidine binding domain RK64_RS07600 SM00387 Histidine kinase-like ATPases RK64_RS07600 SM00388 His Kinase A (phosphoacceptor) domain RK64_RS07605 SM00448 cheY-homologous receiver domain RK64_RS07605 SM00862 Transcriptional regulatory protein, C terminal RK64_RS07620 SM00014 Acid phosphatase homologues RK64_RS07635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RK64_RS07635 SM00245 tail specific protease RK64_RS07680 SM00567 E-Z type HEAT repeats RK64_RS07680 SM00932 Scaffold protein Nfu/NifU N terminal RK64_RS07685 SM00932 Scaffold protein Nfu/NifU N terminal RK64_RS07710 SM00844 GA module RK64_RS07730 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RK64_RS07730 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RK64_RS07735 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RK64_RS07735 SM00475 5'-3' exonuclease RK64_RS07755 SM00981 RK64_RS07755 RK64_RS07805 SM00478 endonuclease III RK64_RS07805 SM00525 RK64_RS07805 RK64_RS07820 SM00479 RK64_RS07820 RK64_RS07820 SM00491 RK64_RS07820 RK64_RS07855 SM00914 RK64_RS07855 RK64_RS07860 SM00028 Tetratricopeptide repeats RK64_RS07885 SM00562 RK64_RS07885 RK64_RS07910 SM00411 bacterial (prokaryotic) histone like domain RK64_RS07925 SM00316 Ribosomal protein S1-like RNA-binding domain RK64_RS07950 SM00870 RK64_RS07950 RK64_RS07965 SM00257 Lysin motif RK64_RS07970 SM00487 DEAD-like helicases superfamily RK64_RS07970 SM00490 helicase superfamily c-terminal domain RK64_RS08025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RK64_RS08025 SM00387 Histidine kinase-like ATPases RK64_RS08025 SM00388 His Kinase A (phosphoacceptor) domain RK64_RS08030 SM00448 cheY-homologous receiver domain RK64_RS08030 SM00862 Transcriptional regulatory protein, C terminal RK64_RS08035 SM00363 S4 RNA-binding domain RK64_RS08100 SM00342 helix_turn_helix, arabinose operon control protein RK64_RS08100 SM00871 Bacterial transcription activator, effector binding domain RK64_RS08105 SM00642 Alpha-amylase domain RK64_RS08110 SM00354 helix_turn _helix lactose operon repressor RK64_RS08125 SM01350 RK64_RS08125 RK64_RS08155 SM00861 Transketolase, pyrimidine binding domain RK64_RS08205 SM00878 Biotin carboxylase C-terminal domain RK64_RS08215 SM00841 Elongation factor P, C-terminal RK64_RS08215 SM01185 RK64_RS08215 RK64_RS08240 SM00450 Rhodanese Homology Domain RK64_RS08300 SM00849 Metallo-beta-lactamase superfamily RK64_RS08355 SM00382 ATPases associated with a variety of cellular activities RK64_RS08360 SM00518 AP endonuclease family 2 RK64_RS08365 SM00487 DEAD-like helicases superfamily RK64_RS08365 SM00490 helicase superfamily c-terminal domain RK64_RS08385 SM00400 zinc finger RK64_RS08385 SM00493 RK64_RS08385 RK64_RS08395 SM00116 Domain in cystathionine beta-synthase and other proteins. RK64_RS08455 SM00729 Elongator protein 3, MiaB family, Radical SAM RK64_RS08470 SM00271 DnaJ molecular chaperone homology domain RK64_RS08490 SM00729 Elongator protein 3, MiaB family, Radical SAM RK64_RS08500 SM00838 Elongation factor G C-terminus RK64_RS08515 SM00849 Metallo-beta-lactamase superfamily RK64_RS08525 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RK64_RS08540 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK64_RS08550 SM01103 RK64_RS08550 RK64_RS08600 SM00878 Biotin carboxylase C-terminal domain RK64_RS08610 SM00797 Allophanate hydrolase subunit 2 RK64_RS08615 SM00796 Allophanate hydrolase subunit 1 RK64_RS08650 SM00732 Likely ribonuclease with RNase H fold. RK64_RS08660 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RK64_RS08665 SM00382 ATPases associated with a variety of cellular activities RK64_RS08670 SM00028 Tetratricopeptide repeats RK64_RS08705 SM00382 ATPases associated with a variety of cellular activities RK64_RS08735 SM00287 Bacterial SH3 domain homologues RK64_RS08735 SM00646 RK64_RS08735 RK64_RS08745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK64_RS08745 SM00954 Region found in RelA / SpoT proteins RK64_RS08765 SM01323 RK64_RS08765 RK64_RS08780 SM00382 ATPases associated with a variety of cellular activities RK64_RS08785 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RK64_RS08890 SM01004 Delta-aminolevulinic acid dehydratase RK64_RS08920 SM00382 ATPases associated with a variety of cellular activities RK64_RS08920 SM00994 ClpX C4-type zinc finger RK64_RS08920 SM01086 C-terminal, D2-small domain, of ClpB protein RK64_RS08970 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain RK64_RS08995 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RK64_RS09005 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain RK64_RS09005 SM01232 RK64_RS09005 RK64_RS09010 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs RK64_RS09010 SM00474 3'-5' exonuclease RK64_RS09010 SM00475 5'-3' exonuclease RK64_RS09010 SM00482 DNA polymerase A domain RK64_RS09020 SM00387 Histidine kinase-like ATPases RK64_RS09020 SM00388 His Kinase A (phosphoacceptor) domain RK64_RS09025 SM00448 cheY-homologous receiver domain RK64_RS09025 SM00862 Transcriptional regulatory protein, C terminal RK64_RS09035 SM01329 RK64_RS09035 RK64_RS09075 SM00919 Malic enzyme, NAD binding domain RK64_RS09075 SM01274 RK64_RS09075 RK64_RS09080 SM00481 DNA polymerase alpha chain like domain RK64_RS09095 SM00116 Domain in cystathionine beta-synthase and other proteins. RK64_RS09105 SM00849 Metallo-beta-lactamase superfamily RK64_RS09120 SM01002 Alanine dehydrogenase/PNT, C-terminal domain RK64_RS09120 SM01003 Alanine dehydrogenase/PNT, N-terminal domain RK64_RS09150 SM00981 RK64_RS09150 RK64_RS09170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. RK64_RS09180 SM00363 S4 RNA-binding domain RK64_RS09180 SM01390 RK64_RS09180 RK64_RS09225 SM00563 Phosphate acyltransferases RK64_RS09230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. RK64_RS09235 SM00363 S4 RNA-binding domain RK64_RS09250 SM00725 NEAr Transporter domain RK64_RS09280 SM00354 helix_turn _helix lactose operon repressor RK64_RS09290 SM00830 Chorismate mutase type II RK64_RS09315 SM00843 RK64_RS09315 RK64_RS09345 SM00849 Metallo-beta-lactamase superfamily RK64_RS09385 SM00363 S4 RNA-binding domain RK64_RS09405 SM00450 Rhodanese Homology Domain RK64_RS09420 SM00729 Elongator protein 3, MiaB family, Radical SAM RK64_RS09430 SM00347 helix_turn_helix multiple antibiotic resistance protein RK64_RS09485 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RK64_RS09495 SM00226 Low molecular weight phosphatase family RK64_RS09500 SM00047 Lysozyme subfamily 2 RK64_RS09575 SM01321 RK64_RS09575 RK64_RS09590 SM01234 RK64_RS09590 RK64_RS09610 SM00894 Excalibur calcium-binding domain RK64_RS09760 SM00382 ATPases associated with a variety of cellular activities RK64_RS09775 SM01260 RK64_RS09775 RK64_RS09910 SM00382 ATPases associated with a variety of cellular activities RK64_RS09940 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK64_RS09975 SM00530 Helix-turn-helix XRE-family like proteins RK64_RS09980 SM00421 helix_turn_helix, Lux Regulon RK64_RS09980 SM00448 cheY-homologous receiver domain RK64_RS10035 SM00382 ATPases associated with a variety of cellular activities RK64_RS10040 SM00062 Bacterial periplasmic substrate-binding proteins RK64_RS10240 SM00382 ATPases associated with a variety of cellular activities RK64_RS10250 SM00478 endonuclease III RK64_RS10320 SM00226 Low molecular weight phosphatase family RK64_RS10335 SM00421 helix_turn_helix, Lux Regulon RK64_RS10335 SM00448 cheY-homologous receiver domain RK64_RS10340 SM00387 Histidine kinase-like ATPases RK64_RS10410 SM00479 RK64_RS10410 RK64_RS10430 SM00046 Diacylglycerol kinase catalytic domain (presumed) RK64_RS10445 SM00845 GatB domain RK64_RS10470 SM00278 Helix-hairpin-helix DNA-binding motif class 1 RK64_RS10470 SM00292 breast cancer carboxy-terminal domain RK64_RS10470 SM00532 Ligase N family RK64_RS10490 SM00998 Adenylosuccinate lyase C-terminus RK64_RS10550 SM00710 Parallel beta-helix repeats RK64_RS10560 SM01131 RK64_RS10560 RK64_RS10625 SM00382 ATPases associated with a variety of cellular activities RK64_RS10635 SM00382 ATPases associated with a variety of cellular activities RK64_RS10640 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK64_RS10740 SM00883 Chaperonin 10 Kd subunit RK64_RS10770 SM00793 Accessory gene regulator B RK64_RS10775 SM00794 Staphylococcal AgrD protein RK64_RS10785 SM00448 cheY-homologous receiver domain RK64_RS10785 SM00850 LytTr DNA-binding domain RK64_RS10800 SM00640 Glycosyl hydrolases family 32 RK64_RS10805 SM00354 helix_turn _helix lactose operon repressor RK64_RS10825 SM00881 CoA binding domain RK64_RS10830 SM00382 ATPases associated with a variety of cellular activities RK64_RS10840 SM00534 ATPase domain of DNA mismatch repair MUTS family RK64_RS10890 SM00917 LeuA allosteric (dimerisation) domain RK64_RS10895 SM01329 RK64_RS10895 RK64_RS10945 SM00731 SprT homologues. RK64_RS10950 SM00316 Ribosomal protein S1-like RNA-binding domain RK64_RS10950 SM00732 Likely ribonuclease with RNase H fold. RK64_RS10990 SM01005 Alanine racemase, C-terminal domain RK64_RS11035 SM00387 Histidine kinase-like ATPases RK64_RS11035 SM00388 His Kinase A (phosphoacceptor) domain RK64_RS11040 SM00448 cheY-homologous receiver domain RK64_RS11040 SM00862 Transcriptional regulatory protein, C terminal RK64_RS11045 SM00487 DEAD-like helicases superfamily RK64_RS11045 SM00490 helicase superfamily c-terminal domain RK64_RS11080 SM00155 Phospholipase D. Active site motifs. RK64_RS11085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. RK64_RS11170 SM00382 ATPases associated with a variety of cellular activities RK64_RS11230 SM00226 Low molecular weight phosphatase family RK64_RS11245 SM00937 RK64_RS11245 RK64_RS11265 SM00357 Cold shock protein domain RK64_RS11265 SM00382 ATPases associated with a variety of cellular activities RK64_RS11265 SM00959 Rho termination factor, N-terminal domain RK64_RS11340 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain RK64_RS11350 SM01133 RK64_RS11350 RK64_RS11395 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor RK64_RS11435 SM00382 ATPases associated with a variety of cellular activities RK64_RS11665 SM00829 Enoylreductase RK64_RS11670 SM00829 Enoylreductase RK64_RS11695 SM01133 RK64_RS11695 RK64_RS11710 SM00420 helix_turn_helix, Deoxyribose operon repressor RK64_RS11710 SM01134 RK64_RS11710 RK64_RS11740 SM00422 helix_turn_helix, mercury resistance RK64_RS11795 SM00382 ATPases associated with a variety of cellular activities RK64_RS11835 SM00382 ATPases associated with a variety of cellular activities RK64_RS11840 SM00382 ATPases associated with a variety of cellular activities RK64_RS11850 SM00662 RNA polymerases D RK64_RS11870 SM00316 Ribosomal protein S1-like RNA-binding domain RK64_RS11925 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. RK64_RS11930 SM01374 RK64_RS11930 RK64_RS11950 SM00322 K homology RNA-binding domain RK64_RS11965 SM01382 RK64_RS11965 RK64_RS11965 SM01383 RK64_RS11965 RK64_RS11985 SM01403 RK64_RS11985 RK64_RS12000 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RK64_RS12000 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RK64_RS12000 SM00493 RK64_RS12000 RK64_RS12060 SM00347 helix_turn_helix multiple antibiotic resistance protein RK64_RS12095 SM00729 Elongator protein 3, MiaB family, Radical SAM RK64_RS12120 SM00852 Probable molybdopterin binding domain RK64_RS12130 SM00852 Probable molybdopterin binding domain RK64_RS12140 SM00382 ATPases associated with a variety of cellular activities RK64_RS12205 SM00988 UreE urease accessory protein, N-terminal domain RK64_RS12245 SM00342 helix_turn_helix, arabinose operon control protein RK64_RS12295 SM00047 Lysozyme subfamily 2 RK64_RS12310 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RK64_RS12310 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RK64_RS12325 SM00420 helix_turn_helix, Deoxyribose operon repressor RK64_RS12480 SM00382 ATPases associated with a variety of cellular activities RK64_RS12585 SM00382 ATPases associated with a variety of cellular activities RK64_RS12595 SM00448 cheY-homologous receiver domain RK64_RS12595 SM00862 Transcriptional regulatory protein, C terminal RK64_RS12600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain RK64_RS12600 SM00387 Histidine kinase-like ATPases RK64_RS12600 SM00388 His Kinase A (phosphoacceptor) domain RK64_RS12605 SM00850 LytTr DNA-binding domain RK64_RS12640 SM00829 Enoylreductase RK64_RS12695 SM00342 helix_turn_helix, arabinose operon control protein RK64_RS12720 SM00347 helix_turn_helix multiple antibiotic resistance protein RK64_RS12745 SM00422 helix_turn_helix, mercury resistance RK64_RS12750 SM00421 helix_turn_helix, Lux Regulon RK64_RS12750 SM00448 cheY-homologous receiver domain RK64_RS12755 SM00387 Histidine kinase-like ATPases RK64_RS12780 SM00926 Molybdopterin oxidoreductase Fe4S4 domain RK64_RS12865 SM00382 ATPases associated with a variety of cellular activities RK64_RS12875 SM00062 Bacterial periplasmic substrate-binding proteins RK64_RS12875 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. RK64_RS12895 SM00855 Phosphoglycerate mutase family RK64_RS12955 SM00729 Elongator protein 3, MiaB family, Radical SAM RK64_RS12955 SM00876 Biotin and Thiamin Synthesis associated domain RK64_RS12980 SM00382 ATPases associated with a variety of cellular activities RK64_RS12985 SM00382 ATPases associated with a variety of cellular activities RK64_RS13020 SM00871 Bacterial transcription activator, effector binding domain RK64_RS13100 SM00116 Domain in cystathionine beta-synthase and other proteins. RK64_RS13100 SM00382 ATPases associated with a variety of cellular activities RK64_RS13145 SM00382 ATPases associated with a variety of cellular activities RK64_RS13190 SM00382 ATPases associated with a variety of cellular activities RK64_RS13195 SM00382 ATPases associated with a variety of cellular activities RK64_RS13370 SM01208 RK64_RS13370 RK64_RS13420 SM00345 helix_turn_helix gluconate operon transcriptional repressor RK64_RS13420 SM00895 RK64_RS13420 RK64_RS13425 SM00422 helix_turn_helix, mercury resistance RK64_RS13430 SM00954 Region found in RelA / SpoT proteins RK64_RS13465 SM00347 helix_turn_helix multiple antibiotic resistance protein RK64_RS13480 SM00382 ATPases associated with a variety of cellular activities RK64_RS13510 SM00347 helix_turn_helix multiple antibiotic resistance protein RK64_RS13540 SM00382 ATPases associated with a variety of cellular activities RK64_RS13675 SM00382 ATPases associated with a variety of cellular activities RK64_RS13675 SM01086 C-terminal, D2-small domain, of ClpB protein RK64_RS13690 SM00899 RK64_RS13690 RK64_RS13715 SM01266 RK64_RS13715 RK64_RS13945 SM00857 Resolvase, N terminal domain RK64_RS13995 SM00530 Helix-turn-helix XRE-family like proteins RK64_RS14105 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain RK64_RS14105 SM00437 Bacterial DNA topoisomerase I DNA-binding domain RK64_RS14105 SM00493 RK64_RS14105