        yaaA NONE
        recF NONE
        gyrB NONE
        gyrA    9674 ..    9703 + -12.3  -4.91109   AGAATAATAAAAAAA       TAAGACTTCCCTA TATG TAGGGGGGTCTTA        TTTTTATGCTAGAAA 100 34
        hutH   12679 ..   12705 + -17.4  -6.14618   GGGTGGCAACGCGTA         GACCACGTCCCT TGT AGGGATGTGGTC         TTTTTTTATTTTCTA 100 299
        serS   14153 ..   14174 +  -8.7  -5.69473   ATAATATTTTAAAAA           GTGGTGACG AAGC TGTCGCCAC            TTTTTTTGTGCTGTA 100 109
SAHC1340_RS00050 NONE
SAHC1340_RS00055   16044 ..   16070 +  -4.5  -5.63517   TGATAAGTATAAAGA         CTTCTTACTTT TCAAT AGGGTGAGAAG         TTTTTTGTTTAAGGA  82 335
SAHC1340_RS00060 NONE
SAHC1340_RS00065 NONE
        gdpP NONE
        rplI NONE
        dnaB   22340 ..   22362 +  -2.8  -3.82484   TTCTTTTAAAAAGGC           TGAAAATCAA TGT TCGATTTTTA           TTTGCATTATGGTCT  49 213
SAHC1340_RS00085   23755 ..   23780 +  -7.6  -4.95302   ATTATAAATACATGA         GCCTTCTATC TTTATT GGTAGGAGGC          TTTTGTTATGTTTGC  88 66
SAHC1340_RS00090 NONE
SAHC1340_RS00095   24305 ..   24326 + -13.1  -5.22943   TCGAGACCGTACAAA           TGCCTATCC AAGA GGATAGGCA            TTTTTTGCGTTTAAT 100 30
SAHC1340_RS00100 NONE
        walK NONE
SAHC1340_RS00110 NONE
SAHC1340_RS00115   29576 ..   29617 +    -3  -4.79223   TATGAATCGTAATAA GCTAGCATTGCAAGCTCAT CATAT GTGAGAA-GCGGTGCTAGC TTTTTGCTGGTATGG  62 41
SAHC1340_RS00120   30757 ..   30801 +  -5.8  -5.86465   AATATAAATGAGAGT CACCCGATAAAGTT-CCGCAC TGCT GTGAAACGACTTTATCGGGTG TTTTTTTATGTTGTT  95 34
        adsA   33310 ..   33345 +  -9.2  -5.60993   ATATATTGAAAACAA    TACTACTGTATTTCTT AAAC AAGAGGTACGGTAGTG     TTTTTTTATGAAAAA 100 42
        rlmH   34143 ..   34153 +    -4  -2.79349   GTATCATAAATAAAA                 CTAA AAA TTAG                 GTTGTGTATAATTTA  46 28
SAHC1340_RS00135 NONE
SAHC1340_RS00140 NONE
SAHC1340_RS00145   37382 ..   37423 + -11.8  -5.89827   ATTTAAATAAAAAAA TAAACCCAACAAACCTCG TTATAT CAATGTTTGTTGGGTTTA  TTTTTTTTGGTGATT 100 72
SAHC1340_RS00150 NONE
SAHC1340_RS00155 NONE
SAHC1340_RS00160   40746 ..   40771 + -16.3   -2.7044   AAGTAATCTAATTAC         GTACTACAGGC AACT GCCTGTAGTAC          TCATATAATTAAGTG 100 105
SAHC1340_RS00165   42598 ..   42610 +  -3.5  -3.63741   GGAGGGATTTTGAAA                TATTT TAT AAATA                TATATTTTATTTATG  50 53
SAHC1340_RS00170   43038 ..   43057 +  -3.6  -3.28712   ACTATCTGTCACAGT            TATCAATG AAGT CATTGAGA             TTATGAAAGAAAAAC  47 66
SAHC1340_RS00175 NONE
SAHC1340_RS00180 NONE
SAHC1340_RS00185 NONE
SAHC1340_RS00190   45640 ..   45650 +  -5.4  -3.05819   AGAAATCGTTGGGTT                 CGTT TTG AACG                 TGTTAAAAATCTGTG  54 199
SAHC1340_RS00200   47957 ..   47967 +  -2.6  -3.61268   AAACATTAAAAATCG                 TAAA AGA TTTA                 TTTGGAAGTTCAATA  47 234
SAHC1340_RS00215   50826 ..   50865 + -14.6  -4.60746   TGAATAAAAAATCAG  CCTGTATCTTATGTTACT ATTA AGTAATTTAAGATACAGG   TTTTACTATTTTTGA 100 116
SAHC1340_RS00220 NONE
SAHC1340_RS00225 NONE
SAHC1340_RS00230   53030 ..   53049 +  -2.2  -4.48792   AACTATTTTCAAAGA            CACATT GATTTCAA AATGTG             TTCTTTTTCAATTAT  57 49
SAHC1340_RS00240 NONE
SAHC1340_RS00245   55495 ..   55526 + -13.2   -3.2178   GAAAGCGATTAACAA      GCTCTACATCAC CTTTACGA GTGATGTAGAGC       TCTCTTATCATATCA 100 42
SAHC1340_RS00250   56189 ..   56222 + -14.8   -3.4556   ATAATAGTAAAACCA     GAGCATCCCTTCACT TTTAT AGTGA-GGGATGCTC     TCTATTTAATTTTTT 100 48
SAHC1340_RS00255   56904 ..   56954 +  -9.3  -5.58074   TATGAATTATCATCT TTAA-TATAAGAGCATCCCTCACT GCAA AGTGAAGGATGCTCTTTTAGTTTA TTTTTTTACTGATTA 100 49
SAHC1340_RS00270   61629 ..   61656 + -13.6  -3.65046   ATAACTTTTTTGACA        GCCACATTTTTC AACG GAAGAATGTGGC         TTCTTGGCGTGAAGA 100 116
        merR   62282 ..   62300 +  -5.2  -3.76176   AAAACGCATTTCCTT             CACCGCTA TAA TGACGGTG             TTGTTAATCGGTTTA  61 62
SAHC1340_RS00285 NONE
SAHC1340_RS00290 NONE
        merA   65547 ..   65566 +  -2.2  -3.29043   TAAGGAGGAATAAGC            TTATGAAA AATA TTTCAGAA             TTCTCAGCCCAACTT  43 105
        merB   66374 ..   66396 +   -15  -3.65425   GAATATAGGAGTAAA           TAAGGTGCCA AAA TGGCACCTTA           TTTAAAATATGTAAC 100 200
SAHC1340_RS00320   69722 ..   69770 +  -6.8  -3.10796   TTTGTCTCAATAGAA AGTTAGAGGTGAGTCTTACGTT TCAGT GACGGTAGACTTACCTTTAACA TGTTACATACTAAAA  62 28
SAHC1340_RS00325   70242 ..   70292 + -15.9  -3.35912   CTTATTAATAATTCA TAATAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTGTTA TTCATCTATATCGTA 100 23
       mecR1   74556 ..   74591 + -10.6  -5.26875   ACAATACATAGAAAA    CAGAGGAAACAATCAA GTCG TTGAATATTTCCTCTG     TTTTTTAGTTGAAAA 100 428
SAHC1340_RS00345   76197 ..   76231 + -17.4  -5.02439   GTCTTTATAAAAAAA     TCCCTCAATCCGAA TTGAATT TTCGGATTGAGGGA     TTTTTATAGTTCTAT 100 77
        cstR NONE
SAHC1340_RS00370   79928 ..   79968 +   -10  -3.09589   TGATAATTAGTTAAA  TATAAAAAGGTTATCCCA ATCAA TAGGATAACCTCTTTATA  CTTTACTTTATGGTT  81 224
SAHC1340_RS00450 NONE
SAHC1340_RS00455   96134 ..   96150 +  -2.3  -3.88985   ATTGAAATTTATTAA              TCTAGTA AAC TAATAGA              TTTATAGAAAATTTT  50 267
SAHC1340_RS00460 NONE
        mcrC   99049 ..   99065 +  -2.3  -4.39227   GTTGTTTTTTAGAGG              TTTAAGA TTG TCATAAA              TTTAGTTTTATTTGT  55 94
SAHC1340_RS16840   99817 ..   99829 +  -2.7  -2.87769   TCTTGATTCAGTCGT                TCAAT TAG ATTGG                TACTCTTTAGTCGAT  42 273
SAHC1340_RS00495 NONE
SAHC1340_RS00500  105245 ..  105258 +  -5.3   -4.4572   TGGAATTAACACCTC               GTCAT ATTC ATGAC                TTTGTTTACAATATT  70 32
SAHC1340_RS00505  106209 ..  106220 +  -5.8  -2.69151   TTTTTGATGACGGGT                CCCT TCCT AGGG                 TGCTCTCTCAGACAC  55 146
SAHC1340_RS00510  107029 ..  107048 +  -5.8  -4.18494   TTGAAAAAATGTTTA            TAACGTAT AAAT ATACGTTG             TTTTAAATCACCCTA  68 23
SAHC1340_RS00525  109038 ..  109050 +  -4.1  -4.51812   CATATTATCAAATTA                TTGAG TAT CTCGA                TTTATTGTTATACAC  63 83
SAHC1340_RS00530  109797 ..  109818 +  -4.4  -5.63374   GAAAGATAATTAAGA           GAGTGCTC ATTCAG GAGTGCTC            TTTTTTTGATGTTCA  82 32
SAHC1340_RS00535 NONE
SAHC1340_RS00540  113782 ..  113808 +  -7.3  -5.20154   AAAAAATAACGATAA         GGAGCTGGC GATTATAAA GCTAGCTCC         TTTTTTAACTTATAT  91 32
SAHC1340_RS00545  114989 ..  115030 + -10.5  -5.45802   ATAATGATATTAAGA CGAGTA-TGAAAATAGTTAG ATT CTACTTATTTTCACTACTCG TTTTTATTTTGAAAA 100 48
SAHC1340_RS00550 NONE
SAHC1340_RS00555  118307 ..  118335 +  -8.3  -5.47159   TAAAATGATCACAAA        TCGCAAATTTTGT TAT ACATAATTTGTGA        TTTTTTGTATTCAAA  95 38
SAHC1340_RS00560 NONE
SAHC1340_RS00565  121140 ..  121189 + -12.6  -3.31443   TAATATAAATATAAA TAAAAAACCATCCACTTAAACTT TTGAT AAGTT-AGGTGGATGGTTATTTA TTGCGTTGTTCTAAA 100 152
SAHC1340_RS00580  126302 ..  126318 +  -2.3  -3.87627   GAAATAGGTTGTAGA              TTAATCA GGA TGATAAA              TATTTTATATAAAGA  48 243
SAHC1340_RS00585  127997 ..  128038 + -10.4  -5.24989   CTAATTATTCATGAA TCGAACTAGTACGAAATGC AATGA GCATCTTGT-CTAGTTCGA TTTTTTAATGTCTAA 100 84
        sbnA NONE
        sbnB NONE
        sbnC NONE
        sbnD NONE
        sbnE NONE
        sbnF NONE
        sbnG NONE
        sbnH NONE
        sbnI  145609 ..  145648 + -10.4  -5.28983   TAAAACAATATAGTG  TGGAGAACTTTTGATATTT TAT AAATATTGAA-GTTCTCCA  TTTTTGTATTTTGCA 100 99
SAHC1340_RS00665  146424 ..  146451 +  -2.7  -3.72588   AAAACGACATTTAAA        CGCATTGCC AATCACTAAA GGTAGTGCG         TTTAACTATACCTTA  49 92
SAHC1340_RS00670  147370 ..  147405 + -10.7  -5.16237   TTAATAATAAATAAA    TCCTTATTGTTAAGT TTAATC ACTTAGCAGTAAGGA     TTTTTTAGTGCACTT 100 51
SAHC1340_RS00680 NONE
SAHC1340_RS00685 NONE
SAHC1340_RS00690 NONE
SAHC1340_RS00695 NONE
SAHC1340_RS00700  153566 ..  153591 +  -3.4  -3.39936   TTAATTATTATAAAA         GTATATTCAT AAAAGG AGGAATATAC          TTATGGCATTTAAAT  49 265
SAHC1340_RS00705  154213 ..  154239 + -10.2  -5.38249   ACTTAATATAATTGA         GGTGGAGCATCT ATT AGGTGTTTCACC         TTTTTTGTACTTAAT 100 45
SAHC1340_RS00710  155302 ..  155312 +    -4  -5.82316   ACAATAGCTAAACAG                 TCAT CAC ATGA                 TTTTTTTTCAATAAT  84 100
        deoD NONE
     tet(38) NONE
        deoC NONE
        deoB  160359 ..  160400 + -16.1  -5.22006   TAGATATAATAAAAA CAGCAGTGAAGTTAACTAT AATA ATAGTTTTCTTCACTGCTG  TTTTTATTATAATAG 100 49
SAHC1340_RS00765 NONE
SAHC1340_RS00770  167395 ..  167418 +  -6.8  -5.77734   CGGATATATGTAAAA          CTTACTTGAT TTTA ATCGGGTAAG           TTTTTGTTTTTGTTT 100 41
SAHC1340_RS00775 NONE
SAHC1340_RS00780  169501 ..  169535 + -16.6  -5.27335   ACACCAATATTTAAA     CCTCGAGCTGAAAAGA TTA TCATTTCAGTTCGAGG     TTTTTATTTGCAACA 100 42
        adhE  172547 ..  172573 +  -6.6  -5.09762   CCACATAAACTTAAA         GTCGATAATCAT TAT ACGGTTATCGGC         TTTTCTTTATTGCCA  84 93
        capA NONE
       cap8C NONE
       cap8D NONE
       cap8E NONE
       cap8F NONE
       cap8G NONE
       cap8H NONE
       cap8I NONE
       cap8J NONE
       cap8K NONE
       cap8L NONE
       cap8M NONE
        capN NONE
       cap8O NONE
       cap8P  189645 ..  189665 +  -6.9  -3.44924   TAATATGTTTATTTT            TGATAGTGG TAG CCAATATCA            TGTTTGAATACTTTA  65 97
SAHC1340_RS00880  192408 ..  192449 +  -9.7  -4.94972   TAATGACTAAAATAA TAGCAGTAGGATGGTTT TTAATTGC AAATCATCTTACTGCTG  TTTTTACTTATGCTA 100 165
SAHC1340_RS00885  193888 ..  193919 + -10.2  -2.82584   AAATAAAACATTGTA      GCGCCTAAAACATT AATC AATGTCATAGGCGC       ATGTTTCGTTTTATA  80 39
SAHC1340_RS00895  195097 ..  195117 +  -9.7  -3.72989   CAATTCACGATTTAA            GGGCTGTGT TTG GCATAGCCC            TTTAGATATACATTT  86 291
SAHC1340_RS00900 NONE
SAHC1340_RS00905 NONE
SAHC1340_RS00910 NONE
SAHC1340_RS00915  198736 ..  198747 +    -3  -4.63928   GTTGTTTAGATGCGC                TTGT TGAA ACAA                 TTTTTAAAATAATAT  62 58
SAHC1340_RS00920  199293 ..  199303 +  -3.2  -3.48105   TGTTGCTGGTGTAAG                 GTAC GCG GTGC                 TGTTTGCTAACTTCG  47 42
SAHC1340_RS00925  200537 ..  200563 +  -5.9  -5.71983   TGAATCATATAAGTA         CTACTGCTGTT GTAAA GATGGCAGTAG         TTTTTTTATGATTAC  90 87
SAHC1340_RS00930  202399 ..  202409 +    -4  -4.14243   CAATTGTAACGATGA                 TACA AGA TGTA                 TTTTAGGGTAGAATA  58 313
SAHC1340_RS00935 NONE
SAHC1340_RS00940  210567 ..  210581 +  -2.8  -3.61894   AGCAATATTGAAATT               GCCA AAAATAA TGGC               TTGTTACGACGCATT  47 202
SAHC1340_RS00985  220530 ..  220544 +  -8.6  -2.84051   TGAATGGTGCACGAA               CTTCAC CTT GTGAAG               GTTTAATAGCGATAC  69 336
SAHC1340_RS00995 NONE
        murQ  224774 ..  224784 +  -3.2  -2.78679   ATCAGAGATAGACAA                 CCTT AGG AGGG                 ATTTAAATGACCAAA  43 20
SAHC1340_RS01005 NONE
SAHC1340_RS01010  227275 ..  227298 + -10.4  -5.20216   GTGTGACAAATTAAA          GCAAAGTTCA GGTT TGAGCTTTGC           TTTTTTCATAGTATA 100 177
SAHC1340_RS01020  230609 ..  230636 + -12.8  -3.08446   GTGTGTAATGATTCA        GCCCCCT-CGCTA GAT TAGTGTAGGGGGC        ATTATTATTTCATTA 100 33
SAHC1340_RS01025  231646 ..  231674 + -11.1  -3.99405   TAAGGATACAAATAA       TCCCCCG-CACT TCACAT AGTGGCGGGGGA        TTTATCATGCGTTAA  95 7
SAHC1340_RS01035 NONE
SAHC1340_RS01040 NONE
SAHC1340_RS01045  237845 ..  237859 +  -2.9    -4.323   AAAAGTAGAAAAAGC               CATTA ATCAA TAATG               TTTTAAATATTTAAC  57 13
         ggt  239970 ..  239988 +  -5.2  -2.86432   GGATTCGATTTCGAA             CTTTAGCG TGA CGCTTGAG             TGTAGTAATGTTGGA  53 94
SAHC1340_RS01065  243217 ..  243255 + -15.6  -5.08824   AGTCTAAAAAATCAA   GCAATCATTGTGTGAGTA TAA TACTTACATAATGGTTGC   TTTTTTCAATGAAAA 100 59
        ugpC NONE
SAHC1340_RS01075  246071 ..  246083 +  -2.7    -3.441   TCATCAGTTTTATTT                CTGTA TTT TATAG                CTTTTTAAATATTGG  45 149
SAHC1340_RS01085  248127 ..  248148 +  -5.9  -2.88544   GTGTAGTGGCTCTTA           CAAATTAGC CACA GCTAATATG            TATCTAAAAATAGCC  56 93
SAHC1340_RS01090 NONE
SAHC1340_RS01095 NONE
SAHC1340_RS01100  251581 ..  251622 + -14.8  -2.96216   ATTCACAATAACAAT CCTCACTATTGAAAAG AGTAAATAAG CTTTTCAATAGTGAGG  TATATGATAATAAAA 100 206
        pflB NONE
        pflA  261119 ..  261158 +  -9.4  -4.75174   ATTCAGACCGAAAAG  AAAGCATATGCAACTTCA AGAG TGAAGGGGCATATGCTTC   TTTTTCAATTGAGTA 100 46
SAHC1340_RS16845 NONE
SAHC1340_RS01145  263194 ..  263230 + -13.9  -4.66833   AGTAATATAAACAAA    GACCTCTAAAGTTATCA AGA TGATATCTTCAGAGGTC    TTTTTAACGTTGCCA 100 36
         coa  266074 ..  266091 +  -5.5  -3.73308   CAAGTCTAGTTCGAA             CACACAC TGAT GTGAGTG              GTTTTCTTTATTTTA  61 308
SAHC1340_RS01205  277447 ..  277459 +  -3.5  -3.30124   CCATCAATATTAAAT                TAAAA TAG TTTTA                TTATGAAAAGTGAAA  47 122
SAHC1340_RS01210  278725 ..  278756 +  -7.4  -4.13732   CGAATAATAATTAAA      GCTTATGTTGCACA TATG TTTGTGACATAAGC       TATTTTTATAATTTG  75 34
SAHC1340_RS01235  283123 ..  283137 +  -2.9  -3.53012   AATCATAAGGGAGTT               TTTGT AATGA ACAAA               TTTAAAGGGAACAAA  49 330
SAHC1340_RS01240  284145 ..  284180 +  -8.4  -4.02905   AAAAAATTGTATAAA    GGGCTATTTGATAC AACTATAC GTGTCGAGTAGCCC     TATTTTTAATGTAGT  80 88
SAHC1340_RS01255  287260 ..  287291 +  -6.6   -5.1167   AATAGATACAGTTAA      CCCTAAGG-TGCCTG ATT TAAGCGTCCTTAGGG      TTTTTGTATTGGATT  84 54
SAHC1340_RS01265 NONE
SAHC1340_RS01270 NONE
SAHC1340_RS01275 NONE
SAHC1340_RS01280 NONE
SAHC1340_RS01285 NONE
SAHC1340_RS01290 NONE
SAHC1340_RS01295  294298 ..  294352 +  -3.6    -4.614   TCTTCGAATATACGT TGCTAAATAGCCGGTTTACTTGTGTG AAA TATGCTTGTGAATCGGTTGTTTTGCA TTTTGTATACTTAAA  62 131
SAHC1340_RS01300 NONE
SAHC1340_RS01305 NONE
SAHC1340_RS01310  298338 ..  298379 + -15.6  -3.80279   AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA 100 193
SAHC1340_RS01320 NONE
SAHC1340_RS01325 NONE
SAHC1340_RS01330 NONE
SAHC1340_RS01335 NONE
        tarS  305793 ..  305827 +   -11  -5.17488   AATAAATAATAAAAC    CCCTCAAATCATTGT GAACTA AC-ATGATTTGAGGG     TTTTATTTTACTGTT 100 32
        scdA NONE
SAHC1340_RS01350 NONE
SAHC1340_RS01355  309337 ..  309357 +  -8.4  -5.97575   TTTAAAGCGTCGATA            GGATTACT TTAAC AGTAATCC            TTTTTTTTATGCATT 100 14
        lrgA NONE
        lrgB  310657 ..  310691 +   -13   -5.1634   ATTATCGTAAAAAAA     CGTCTATACTCCGGTT TAT AACTGGGATATAGACG     TTTTTATGTATTTAT 100 84
SAHC1340_RS01370  313402 ..  313446 + -17.5  -2.82856   AGAAATTATGTCCTA TAAAACGTCTATACTCCGGTT TAT AACTGGAATATAGACGTTTTG ATGTTTGTATTACTT 100 197
SAHC1340_RS01380  315074 ..  315086 +  -3.5  -3.55444   TACGACTGAAGATGT                TATTT TTA AAATA                TTTAAAAACTAGGAG  50 1
SAHC1340_RS01385  317036 ..  317051 +    -4  -4.13561   AAAGTACAGTTAGTG              GCATTA TATT TAGTGC               TCTTTTTTAGCGACA  58 511
SAHC1340_RS01400  318118 ..  318131 +  -4.5   -4.1552   CCGTGTTTTTGTACA               GTGAG TGAG CTCGC                TTTATTACCAAAATC  62 184
SAHC1340_RS01430  322324 ..  322357 + -14.1  -4.89393   GAATAATAATTAGAA     TAAGCGAAGAACAAT GAAA AATGTTCTTCGCTTA      TTTTTATAGAATTTG 100 49
SAHC1340_RS01440  325198 ..  325209 +    -3  -2.84999   CAATGTATGGCTATT                TTGT AATG ACAA                 TGTAATGAGTTTAGT  43 192
        lytM  326317 ..  326348 +  -9.6  -5.48054   AGATAATACAGTAAA      TCCCAAGTTACGATA TCA TA-CGCAACTTGGGA      TTTTTTCGTTTTAAT 100 35
        esxA  332485 ..  332514 + -14.5  -3.81575   AGCATTCTGAAATTG       GCAAAGTCACATT TTCT AATGTGGCTTTGC        TTATCATTTTTTAAG 100 40
        esaA NONE
        essA NONE
        esaB NONE
        essB NONE
        essC NONE
SAHC1340_RS01505 NONE
SAHC1340_RS01510 NONE
SAHC1340_RS01515 NONE
SAHC1340_RS01520 NONE
SAHC1340_RS01525 NONE
SAHC1340_RS01530 NONE
SAHC1340_RS01535  346620 ..  346631 +    -3  -4.28589   TAGCTACTATTGTAC                TTTC ATAA GAAA                 TTTTCAATAATTTTT  57 18
SAHC1340_RS01540  347042 ..  347073 +  -9.6  -5.27335   AATGAATTTGAAGAA      GCATTAAGCGACAT TTGG GTGTTGTTTAATGC       TTTTTATTTAACGGA 100 45
SAHC1340_RS01545 NONE
SAHC1340_RS01550 NONE
SAHC1340_RS01555  348716 ..  348730 +  -7.2  -2.89797   TAATCTTAGTTTGCT               GCAATT TAA AATTGC               TGATATTTCTAGGAA  63 74
SAHC1340_RS16850 NONE
SAHC1340_RS01560  349416 ..  349430 +  -2.2  -2.71731   GAGTTGAAAGACTTT               TTTATT AAA AATAGA               TGATTAAGGAGTAAC  39 8
SAHC1340_RS01565 NONE
SAHC1340_RS01570 NONE
SAHC1340_RS01575  350640 ..  350670 +  -6.9  -3.03012   ATATATTAATTTAAA       ATGGGACGGGTTT AAAAG AAATCCGTCCTAA       TGATTTATACATAAT  62 42
SAHC1340_RS01585  352365 ..  352380 +  -2.6  -4.42287   GAAAAAATATTTGAT              GATTTA TGGA TGAATC               TTTATTACTTGTTTA  55 252
SAHC1340_RS01600  354263 ..  354311 +   -12  -4.82128   ACCAATTAAATAAAT TGCTCTCTTAGAAGTAGATTTT CAGTC AATAACTGCTTTTAAGAGAGCA TTTTGTATTTGATAA 100 106
SAHC1340_RS01615  358288 ..  358319 +   -11   -4.7629   AATATATGAATTGGA      CGTCTACATGTACT TAAA GGTATATGTAGGCG       TTTTTAAATTGATCC 100 39
SAHC1340_RS01625 NONE
SAHC1340_RS01630  360273 ..  360291 +   -11  -4.23487   AATAGTTTTATTAAG             CCGGTACA TCA TGTGCCGG             TATTTTTATGTTTAT  95 36
SAHC1340_RS01635  361599 ..  361618 +  -3.6  -2.97475   TTTTATAGAAAAATA            TAAGACAT AAAA ATGTCATA             ATTTATAGTCGACAA  46 123
SAHC1340_RS01640 NONE
SAHC1340_RS01645 NONE
SAHC1340_RS01650  365241 ..  365251 +  -2.6  -3.73534   TGTTGATGGTTTATC                 TTTT TCA AAAA                 TTGTTAATCCCGTTA  51 175
SAHC1340_RS01665  368687 ..  368699 +  -4.9  -3.55622   TGAAAGAAGGAGTCA                TTCTA AAA TAGAA                TTTGAAACCGTTACG  57 45
SAHC1340_RS01675  370990 ..  371004 +  -4.2   -3.0127   GAATATGTAGCCAAG               CCAATC AAT GAATGG               TGTATAGTTCGCTAC  50 463
SAHC1340_RS01695  376509 ..  376526 +  -7.7  -5.68438   CTCACCACCATTCAA             CGTCTAC ACTA GTAGGCG              TTTTTTATTTAGTAA 100 169
SAHC1340_RS01720 NONE
SAHC1340_RS01725 NONE
SAHC1340_RS01735 NONE
SAHC1340_RS01740 NONE
SAHC1340_RS16855 NONE
SAHC1340_RS01745  381005 ..  381022 +  -2.7  -3.07029   TCAACTTGAGTAATC             CATTCTT TGCG AAGCATG              TATTCAAAGTCTTTA  42 193
SAHC1340_RS01750 NONE
SAHC1340_RS01755 NONE
SAHC1340_RS01760 NONE
SAHC1340_RS01765 NONE
SAHC1340_RS01770 NONE
SAHC1340_RS01775 NONE
SAHC1340_RS01780 NONE
SAHC1340_RS01785 NONE
SAHC1340_RS01790  385166 ..  385179 +  -3.9  -2.92265   ACTTATTGACTGGAT               TTTCA AAAT TGAAA                TCATTATCTGTAAAT  46 362
SAHC1340_RS16860 NONE
SAHC1340_RS01815 NONE
SAHC1340_RS01820 NONE
SAHC1340_RS01825 NONE
SAHC1340_RS01830  388477 ..  388497 +  -2.6  -2.53715   AAGAATTATCTGAGA            GAGCAAAA AGAGC TTTTGGTC            ATTAGTGCTCGTGAA  40 0
SAHC1340_RS01835 NONE
SAHC1340_RS01840 NONE
SAHC1340_RS01845 NONE
SAHC1340_RS01850 NONE
SAHC1340_RS01855 NONE
SAHC1340_RS01860  390893 ..  390907 +  -2.8  -2.76281   GAAAGTATGCCCGAC               TACCTG TAA CAGATA               AATTTTTATGTATGA  40 379
SAHC1340_RS01870 NONE
SAHC1340_RS01875 NONE
SAHC1340_RS01880 NONE
SAHC1340_RS01885 NONE
SAHC1340_RS01895  392512 ..  392530 +  -6.7  -5.69262   TATATTTATTTCGAA             CTCTCAC ATTAA GTGAGGG             TTTTTATTTTTATAA 100 92
SAHC1340_RS01900 NONE
SAHC1340_RS01905 NONE
SAHC1340_RS01910 NONE
SAHC1340_RS01915 NONE
SAHC1340_RS01920 NONE
SAHC1340_RS01925 NONE
SAHC1340_RS01930  398151 ..  398177 +  -3.1  -5.25803   ATCAAATACAACCAT        TGGACAT-GCTG AATA TAGCGATGTCTA         TTTTTTATGCCAATT  70 55
SAHC1340_RS01935 NONE
SAHC1340_RS01940 NONE
SAHC1340_RS01945 NONE
SAHC1340_RS01950 NONE
SAHC1340_RS01955 NONE
SAHC1340_RS01960 NONE
SAHC1340_RS01965  402014 ..  402030 +  -9.4  -5.45802   TAGAAATGTAAACGT              GAGGGC TTAAC GCCCTC              TTTTTATTTTGGCCA 100 30
SAHC1340_RS01970 NONE
SAHC1340_RS01975  402703 ..  402720 +  -6.3  -5.65927   AAAGATATTTTTTAA             TCAGCCT TTAA AGGTTGA              TTTTTTATTTACATC  95 26
SAHC1340_RS01980 NONE
SAHC1340_RS01985  409328 ..  409351 +  -3.9  -4.10007   GTACTACGTCATGGA          CTTCTTATC AAACTA GATATGAAG           TTTTAAAGCAATTAT  58 456
SAHC1340_RS02000  412828 ..  412854 +  -8.8  -4.03995   AAGAAAATCAACAAT         GTGCTGAGGA AGAGTAA TCCTTAGCAC         TATTTTTATACAAAA  80 9
SAHC1340_RS02005  413184 ..  413202 +  -6.1  -2.94745   AACAGTATGAAAAGC             TATGAGT TAGAT ACTCATA             ATCTTTATTCTTTTA  58 31
SAHC1340_RS02010  413616 ..  413635 +  -8.6  -5.52807   TGTAAATAAGTTTTA            GTCAGTGC TTCG GTACTGAC             TTTTTATTTATTGTT 100 109
SAHC1340_RS15930  413951 ..  413976 + -10.5  -5.07275   TTAACGGGCTCATTA         GGGTAACATGT TTGC GCATGTTGCCC          TTTTTCTATATATAA 100 118
SAHC1340_RS02020 NONE
SAHC1340_RS02025  415176 ..  415201 +  -8.3  -6.12328   TTTAAATGTGCATAA         CAGGCAGGTAC TTCG GTACTTGCCTA          TTTTTTTTATGTTAT 100 110
SAHC1340_RS02040 NONE
SAHC1340_RS02045 NONE
SAHC1340_RS02050 NONE
SAHC1340_RS02055 NONE
SAHC1340_RS02060 NONE
SAHC1340_RS02065 NONE
SAHC1340_RS02070  423957 ..  423967 +  -2.6  -3.36749   TGGCTTTTGACGACC                 TTTT AAT AAAA                 TTGCTGTTGCACCTA  45 143
        mepR  428624 ..  428645 +  -9.5  -4.39414   CAATAAATGATAAGT           GTGACTGGT AGAA ATCAGTCAC            TTTGTCTTTAATATT  88 35
        mepA  430087 ..  430119 +  -9.2  -3.90048   GTTAAATATTTCGTC      CACTTCTGGCTGAG TATAT TTCGGTCGGAAGTG      TATTTTTCGAAAAAA  84 36
SAHC1340_RS02105  430887 ..  430903 +  -7.9  -5.09895   AATCCTGTTAATCCA              GCTGCTG TGC CAGCTGC              TTTTTTAGGTACATA  89 292
SAHC1340_RS02115 NONE
SAHC1340_RS02120 NONE
SAHC1340_RS02125  434964 ..  435001 +  -6.4  -4.43681   AAAGTATAAAAATAA   GACGCTCGGCACACTAA ATTTG TAAGTGT-TTGAGCGTC   TTTTCATATTAACTA  72 39
SAHC1340_RS02140  437043 ..  437071 +  -6.7  -5.10516   ATTAGACTTACAAAA        GAGTGATGACATT TAA AATGGCAGCGCTC        TTTTATTTAATTTTT  84 44
SAHC1340_RS02145 NONE
        efeB NONE
SAHC1340_RS02155  441069 ..  441083 +  -7.1   -5.5353   TTTAAAAAATAAAAA               CAGGC CGAGT GCCTG               TTTTTTGTTGCTATA  95 29
SAHC1340_RS02175 NONE
SAHC1340_RS02180 NONE
SAHC1340_RS02185  444732 ..  444758 +  -6.6   -5.0916   TAGTAAATGAGAAAA         GCAATGTCCTAT ATT AAAGTACATTGC         TTTTTCTATTAACGA  84 150
SAHC1340_RS02205  448529 ..  448580 +   -17  -4.11692   AAGTAGCTCCTATAT GAAAAATAGAGGTCTTTCCATT TAGATAGT AGTGGAAAGACCTCTATTTATC TTTTGAAAGTGAATA 100 179
SAHC1340_RS02210  450303 ..  450331 +    -6  -5.26875   CAAAAAAAACAAAAA        TCGAAGACATCT TTCAC GGGTGCCTTCGA        TTTTTTGGTTCAAAA  84 65
SAHC1340_RS02215 NONE
SAHC1340_RS02220 NONE
SAHC1340_RS02225 NONE
SAHC1340_RS02230 NONE
        sat4 NONE
aph(3')-IIIa  454684 ..  454733 + -16.3  -4.40358   TTGTTTTAGTACCTA GATTTAGATGTCTAAAAAGCTT TAACTAC AAGCTTTTTAGACATCTAA-TC TTTTCTGAAGTACAT 100 32
SAHC1340_RS02245 NONE
SAHC1340_RS02250  455956 ..  455973 +  -5.6  -3.22851   GTTTCATATCCCCTG             CTGACA TACAGC TGTCAG              TGTATTATGATATTC  58 76
SAHC1340_RS02255  457028 ..  457066 + -12.7  -3.37879   TAAAGTTGTACCGAA   TAAAGCCTTCAAGAGGA CAACA TGCTTTTGAAGGCTTTA   TTGCTTACAATTACT 100 378
SAHC1340_RS02275  460360 ..  460395 +  -4.9  -4.80882   TTGAAATAATATTTA    GAGCAGGTGATAAATC TTTAC GATT-GTCATCTGTTC    TTTTTGGTGTGGAAT  70 66
SAHC1340_RS02290  463548 ..  463589 +  -6.8  -5.56573   TAAATAATAAGAAAA CAGGTTATCACAACA-GTA TTAAT TACATGTTGGCATAACCTG TTTTTATTTGTTTAT 100 34
SAHC1340_RS02320  472376 ..  472393 +  -4.2   -2.7614   AGGGAGTAACGCTTA             TCATGA ATCAAG TCATGA              ATATTATTTCATCTC  45 180
SAHC1340_RS02325 NONE
SAHC1340_RS02330 NONE
        ychF  474641 ..  474664 +    -6  -4.50058   AGTATATATGTAGAA          GAGGCGGA ATCAATTG TTCGCCTC           TTTTAATTATGCGTA  72 65
SAHC1340_RS02345 NONE
         ssb NONE
        rpsR  476255 ..  476280 + -11.1  -5.28983   ATAATTTATTGTCAA         ACCCCGTAGGC ATAG GCTTACGGGGC          TTTTTGTGTTTTGGG 100 44
SAHC1340_RS02375  479043 ..  479074 +   -11   -4.3953   TATCGCTAATACTTT      GAAAGTTAGGTATC TAAA GGTGCCTAGCTTTC       TTTGTTATGATTAGC  95 71
SAHC1340_RS02380  479810 ..  479820 +  -2.6   -2.6176   CGATTAATTTAAAAA                 TATT TGT AATA                 ATTATGAATAAAATT  40 101
SAHC1340_RS02385  480843 ..  480857 +  -3.6  -3.24425   CTAATTCGTCAATTT               CTAAAT TAT GTTTAG               TTCGTAAGTTATATA  49 381
SAHC1340_RS02395  481470 ..  481489 +  -4.3  -5.65927   GGAAATTGAAATAAA            GATGGCA TTCAGT TGTCATC             TTTTTTATTTGCGTG  82 56
SAHC1340_RS02405 NONE
SAHC1340_RS02435  487593 ..  487640 +   -13  -3.69068   AAGATACCAAAATAA CCCGCCCCCCTCTAGCT-TA AAATGATAAG TATAGCTAGAGGGG-GCGGG TATTTCTTGCAATGA 100 42
SAHC1340_RS02445  489613 ..  489624 +    -3  -3.53012   AAAAGCTACCGTAAA                CAAA TATT TTTG                 TTTGAGCAAAAAGGC  49 407
         xpt NONE
SAHC1340_RS02470 NONE
        guaB NONE
        guaA  497743 ..  497785 + -11.5  -4.11027   GTGGGAGTAGTTGTA GGAGAGCTAGAAATCCT CTTATACCA AGGGTTTCTGGCTCTTC TTATCTTTTTACTGC  95 31
SAHC1340_RS02505  501667 ..  501690 +  -2.4  -3.11683   CGACGGGTCTGGCAA          ACAGGTTCGCC AGT GGT-AACCTGA          TATCCTTTTAGCTCT  42 436
SAHC1340_RS02645  531718 ..  531748 +   -12  -5.40072   TTATGGAAATATATG       GAAGTTAAGCGACG TAC TGTTGCTTAGCTTC       TTTTTTTGAGGGGAA 100 80
SAHC1340_RS02650  532686 ..  532719 +    -9  -4.81083   TGAAATTGAAATAGA     GAGGTTAAGTGACG ATCAAA CGTTGCTTAACTTC      TTTTTAATGCTTAAA  93 67
SAHC1340_RS02655  534035 ..  534072 +  -3.6  -4.79352   TCATCGGAAAAACAA   GAAGTTAAGTGACA ACGGTTTACA TGTTGCTTAGCTTC    TTTTATTATGCGTAA  64 67
SAHC1340_RS02660 NONE
SAHC1340_RS02665  535326 ..  535363 +  -3.6  -4.90381   TCATCGGAAAAACAA   GAAGTTAAGTGACA ACGGCCTACA TGTTGCTTAGCTTC    TTTTGTTATGTTCGA  67 67
SAHC1340_RS02670  536395 ..  536424 + -10.1  -5.47159   TATGGATAGTATAGA       GGAGTTAGGCAAC ATAA GTTGCTTAGCTTC        TTTTTTGTGTTGGAG 100 68
SAHC1340_RS02680  537524 ..  537554 + -12.8  -5.92399   ACTAGTAATTGTAGG       GAAGTTAAGCGATA ACA TATTGCTTAGCTTC       TTTTTTATTTTGTTA 100 56
SAHC1340_RS02685  538877 ..  538891 +  -7.2   -3.2756   AGTCTGTCTCAATGC               CCTTTA TAA TAAAGG               TGTATTATTCAAATT  66 293
SAHC1340_RS02690  539642 ..  539654 +    -2  -2.72977   AACATCGAAGTGAAT                TTGA AATAA TCAA                TGATATATATAGAAT  39 17
SAHC1340_RS02695  540809 ..  540821 +  -2.7   -3.4691   CCTTATATAAGGAAC                TGTGT TAA ATACA                TTACTGTTGTTAAGT  45 106
SAHC1340_RS02700 NONE
SAHC1340_RS02710 NONE
SAHC1340_RS02715  544898 ..  544919 +  -8.7  -5.36441   CGAACATTAAATTTA           GGCACTGTG AAAG CGCAGTGTC            TTTTTTGTGTCGAAA 100 122
SAHC1340_RS02720 NONE
SAHC1340_RS02725  547402 ..  547460 +  -8.6  -5.75599   AATAATTAAATAAAA CAGCTTAATGATGTAATGAAATTAGTGA GTTAA TCACTGACTTC-T-ACGTCATTGAGCTG TTTTTTTGTGCTTTG 100 36
SAHC1340_RS02735 NONE
        lpl4 NONE
        lpl5 NONE
        lpl6 NONE
        lpl7  553218 ..  553234 +  -4.5   -2.7169   TATTATTTTAATAGG              TTGTATG AAC TATACAA              ATATTTATAAAAATT  48 151
        lpl8 NONE
        lpl9  555204 ..  555216 +  -2.7  -2.87769   TCTTGATTCAGTCGT                TCAAT TAG ATTGG                TACTCTTTAGTCGAT  42 342
       lpl10 NONE
SAHC1340_RS02785 NONE
SAHC1340_RS02790 NONE
SAHC1340_RS02795 NONE
SAHC1340_RS02805  561211 ..  561238 + -11.4  -5.20783   TGCATTTTATCCATA        GGGCTAAGACAT GTAT GTGTCTTAGTCC         TTTTTATATTTACGT 100 180
SAHC1340_RS02815 NONE
SAHC1340_RS02820 NONE
SAHC1340_RS02825  567380 ..  567418 +  -5.5  -3.33696   ATTTAAGAAGGTTAG  GTATGCTTCTGCTGGCTT ATTA AAGCTA-TAGAAGTATGC   TTGGTTAAACAGCGC  57 35
SAHC1340_RS02835  568722 ..  568732 +    -4  -2.61873   CATCGACGACAACGC                 GTTT AGC AAAC                 ATCTTTAGACATAGT  45 20
SAHC1340_RS02840 NONE
SAHC1340_RS02845  569867 ..  569881 +  -2.1  -3.57185   ATGAAACAATTTTGA               TGCAG GTGTA TTGCA               TGTTATTTACATACA  46 103
SAHC1340_RS02850  571302 ..  571335 +  -4.8  -5.95539   GTTAATATATAGAAG    CATCTGA-C-ACACAA GTAT TTGTGTTGCTCAGGTG     TTTTTTTGTTTGGAA  95 36
SAHC1340_RS02855 NONE
SAHC1340_RS02860  573580 ..  573591 +  -4.4  -3.71487   CATATATTTTGAGTT                CAAC GTTT GTTG                 TTCTTGAATATGCTA  57 57
SAHC1340_RS02865 NONE
SAHC1340_RS02870 NONE
        gmpC  576419 ..  576457 + -10.5  -3.94877   AAATAAATTATATTG  CGTCCTACAAGCA-AAGT TCAT GCTTATGTTTGTAGGGCG   TTATTGTTGGAGAAT  91 35
         aaa  577879 ..  577920 +    -6  -4.48221   TTTGTATATGAAAAA GGATTGGTCGAATGAA CTTCATGTTC TATGTTCGACCAATCC  TTTTCTGAATTAGTA  72 159
SAHC1340_RS02890 NONE
SAHC1340_RS02895  579232 ..  579280 +  -2.6  -5.20333   AAATTAAATTTAAAA GCATCTTTACTCATCGTCGA CCACAACAA TTAATGATGAATAAAGGTGC TTTTTGTTATAGATC  68 39
        gltB NONE
SAHC1340_RS02920 NONE
SAHC1340_RS02925  588839 ..  588867 + -11.9   -5.7827   TCTATATATAATGAA        GGTAAGTGCTCAA ATT TTGAGTATTTACC        TTTTTTATTTGTCTT 100 59
        treP  590717 ..  590739 +  -5.5  -4.27467   AATAAAATAAAAAAG           GGGCGTTCG TTATT TGGACGTCC           TTTATTACGTTATAA  67 39
        treC NONE
        treR  593170 ..  593180 +  -2.6   -2.7566   AAGTAAACAATGATA                 TAAA TGA TTTA                 TACTTGCAATTAACT  40 35
         ffs  593489 ..  593517 +  -6.1  -2.78867   CGATGCTTAGGTGCA        CGGTTTTTTATTT TTT AAATATTAAACCG        ATTATTAAGAGTTGA  58 23
SAHC1340_RS02955 NONE
SAHC1340_RS02960 NONE
        dnaX  596101 ..  596111 +  -5.4  -3.02471   GTGATACATGACAAG                 CGAT ATA ATCG                 TATGTATAATGAAAG  54 37
SAHC1340_RS02970 NONE
        recR  597145 ..  597166 +  -7.3  -5.69473   ACTATAGTAAGAAAA           GTCACAGTG TAAT CATTGTGGC            TTTTTTTATGGTGTG 100 71
SAHC1340_RS02980  597655 ..  597686 +  -3.8  -3.64283   TAGGATAAGGGCGTT      CAGTACAGATGACA AAGG TGTAATTTTTACTG       TTGTTAAGCAGTTTG  52 278
SAHC1340_RS02985  599569 ..  599593 +  -8.8  -4.26777   CATATTGTATTCAGT          TTTGAATGTT TATTT AACATTCAAA          TATTTTTTGGTTAAA  83 90
SAHC1340_RS02990  602841 ..  602861 +    -7  -3.02947   CTTACTATCTAGTTT            TGAATGTA TAAAT TACATTCA            TATGTCTGGTGACTA  65 73
         rrf  603007 ..  603022 +    -9  -5.76633   GCGATGAGCCGCATT              GAGACC GCAA GGTCTC               TTTTTTTATGTCTAA 100 52
SAHC1340_RS03005 NONE
SAHC1340_RS03010 NONE
SAHC1340_RS03015  607997 ..  608013 +  -5.2  -4.53636   TATTTGTTATGCCAG              TTGATG CATTC CATCAA              TTTTAATTCTATAAT  70 3
SAHC1340_RS03025 NONE
SAHC1340_RS03030 NONE
        yabA  610379 ..  610403 +  -7.2  -4.06361   ATATGGTTTGGATAA          GTCTGAGACA ATGCA TGTTTCAGGC          TTTAATTGTGTATAA  72 77
SAHC1340_RS03040 NONE
SAHC1340_RS03045 NONE
        rsmI  612469 ..  612481 +  -2.7  -4.30416   AGCTGTAATTTTAAA                TGGTA AGT TATCA                TTTTGCATTGATACT  55 86
        metG  614651 ..  614671 +  -3.3  -4.62471   TGCAATTCCAAATGG            TGCAGTGAT TAA ATAACTGTA            TTTTTAAAAATTAGG  62 10
SAHC1340_RS03065  615550 ..  615562 +  -3.5  -2.82015   GGTTCTTTCTCACTT                TTTTA AAT TAAAA                TATCGTGCATGTGGA  45 105
        rnmV NONE
        rsmA  617104 ..  617114 +  -2.6  -3.51557   AGCAAAGCACTATTG                 TTAA AAT TTAA                 ATTTTGTTTGACGAA  47 52
SAHC1340_RS03080  617504 ..  617530 +  -8.8  -5.27335   TTATGATAATTATTT         GAGTGTTGGGCA TTA TGTTCAATACTC         TTTTTATTTACAAAA 100 89
SAHC1340_RS03085 NONE
        purR  619434 ..  619447 +  -2.5  -2.53271   TTATCTAAGTTTTCA               TAAAA GGAG TTTTA                GTATTATGAAAATCA  40 23
SAHC1340_RS03095 NONE
       spoVG  620258 ..  620288 + -12.7  -5.75822   TAAGTTGATTTGATA       CTGTCGATAAAGC ATAAA GCTTTGTCGGCAG       TTTTTTTAGTTTGTA 100 76
SAHC1340_RS03105 NONE
        glmU  621988 ..  622000 +  -2.7  -3.37067   TTAATGATTCGCATA                GTAAT GGA GTTAC                ATTTTATATATAATA  45 110
SAHC1340_RS03115  623123 ..  623133 +  -3.2  -4.07885   ATGTTGATGGGTAAG                 TGAG GTG CTCG                 TTTTGAGCAAAAATG  55 133
SAHC1340_RS03125  623861 ..  623892 + -10.3  -5.21506   TACTTTGTTTAACAA      GCACTGTGCTTAT TTTAAT ATAAGCATGGTGC       TTTTTGTGTTATTAT 100 68
SAHC1340_RS03130 NONE
         mfd NONE
SAHC1340_RS03140 NONE
SAHC1340_RS03145 NONE
SAHC1340_RS03150 NONE
SAHC1340_RS03155 NONE
SAHC1340_RS03160  632178 ..  632203 +  -9.1  -4.12652   CGTTAGACAATCTAA         GACTGTTTCTT AAAT AAGGAGCAGTC          TCTTTTATTTGTAAT  86 111
        tilS NONE
         hpt  634175 ..  634194 +  -3.7  -3.41795   GTGTAGACTCAAAAA            TATGAAA AATGTA TTTCATA             TATATTTAATTTTAG  49 89
        ftsH  636475 ..  636511 + -16.9  -4.72556   AATCGATTATATTCA    GTACCTCTTTCTATGAT AAA GTTATAGAAAGAGGTAC    TTTTATCGTTTTTGA 100 39
        hslO  637592 ..  637602 +  -2.6  -4.64657   TTTAAATCAATACGC                 TAAA ATG TTTA                 TTTTTAGCGGTTTAG  60 46
        cysK  638699 ..  638729 + -10.6    -5.626   TAATGTCATTTAAAA       GAGTGAGTTATCTT TTT GAGATAACTTGCTC       TTTTTTTCTACCATG 100 42
        folP NONE
        folB NONE
        folK  640529 ..  640539 +    -4  -3.54382   ATATAAATAATGTAT                 TGTT GAG AACA                 TTCATATTTATTGGG  52 31
SAHC1340_RS03205 NONE
        lysS  642572 ..  642604 + -12.1  -4.37199   TGATTGTTAGTAAGA      GCTCTCGTGTATACA ACA TGTGTATGCGAGGGC      TTTCTTAATTATGGT 100 48
         rrf NONE
SAHC1340_RS03220 NONE
SAHC1340_RS03225 NONE
SAHC1340_RS03230 NONE
SAHC1340_RS03235 NONE
SAHC1340_RS03240  643671 ..  643683 +  -3.3  -3.04715   TACCGGTTCGATTCC                GGTCC TCG GCACC                ATTTTAGCGCCCGTA  46 12
SAHC1340_RS03245 NONE
SAHC1340_RS03250  643837 ..  643851 +  -4.2  -3.07005   GGGACCAAGGGGTCG               CAGGTT CGA ATCCTG               TCTTCCCGATTACTT  48 1
SAHC1340_RS03255 NONE
SAHC1340_RS03260  645629 ..  645641 +  -6.3  -3.07013   TGCGGCTGGATCACC                TCCTT TCT AAGGA                TATATTCGGAACATC  60 20
SAHC1340_RS03265 NONE
SAHC1340_RS03270  648943 ..  648963 +    -7  -3.02947   CTTACTATCTAGTTT            TGAATGTA TAAAT TACATTCA            TATGTCTGGTGACTA  65 73
         rrf  649109 ..  649124 +    -9  -6.06529   GCGATGAGCCGCATT              GAGACC GCAA GGTCTC               TTTTTTTTATGTCTA 100 52
        pdxS NONE
        pdxT  652605 ..  652630 +  -8.4  -4.77122   TTGAGAAGAAAATAT         CTCCTTCAAA CTTAGC TTTGGAGGAG          TTATTTTTTATGTCA  90 86
SAHC1340_RS03300 NONE
SAHC1340_RS03305 NONE
SAHC1340_RS03310 NONE
SAHC1340_RS03315  658646 ..  658675 +  -8.7  -5.52986   AGCATAATTATAAAA       CAGTCCAAAAC AAATTAAA GTTTTGGGCTG        TTTTTTTAGTAGCAT 100 34
        radA NONE
SAHC1340_RS03330  661910 ..  661920 +    -4  -3.01712   GATTCTTAGGGATAG                 CTTT TTT AAAG                 TGTTGAAAAAACAAC  48 351
SAHC1340_RS03335  663915 ..  663950 + -10.6  -5.32699   TGGAACCGTGCGGAA    GCGCCTCTAACAATACA ACT TGTAT-GTTAGTGGTGC    TTTTTTGATATTTAA 100 345
        cysE NONE
SAHC1340_RS03345 NONE
SAHC1340_RS03350 NONE
        rlmB NONE
SAHC1340_RS03360  667722 ..  667735 +  -2.4  -3.15366   GGACATCATAAGAAA               TGAC ATTTCC GTCA                TCTTGAAATTTTGAA  43 23
SAHC1340_RS03365  668448 ..  668458 +    -4  -2.81872   TGTTATAAATTTTAT                 GTAT AGT ATAC                 TGGTATTATAATGAA  46 99
        rpmG NONE
        secE NONE
        nusG  669511 ..  669533 +  -7.6  -3.72893   AGTGTTAAAATTATG           TGGTCGCGCT TTT AGAGCGCCCA           TTTCGTCACGAAATG  73 105
        rplK  670180 ..  670194 +  -5.7  -2.62184   GTTGTCTGCTCTTAA               CTTGC ATATA GCAAG               TAATGTGGGAGGAAA  55 171
        rplA  671127 ..  671153 + -12.4   -5.9003   TCTATGATCTTTCAA         GCACTTTTTGCC GTG GGTAGAAAGTGC         TTTTTTTATTAATTT 100 218
SAHC1340_RS03390 NONE
        rplL  672191 ..  672222 + -17.6  -3.51708   GATTCTTTGAGAAGT      TAAAACCCCGTTAT TTTG ATAACGGGGTTTTA       TTCATTTAAAGACTG 100 99
SAHC1340_RS03400 NONE
        rpoB  676695 ..  676730 +  -7.8  -2.76009   AAACAGGCAAAAAGA    TACTAAGCTGAATTTT ATTG ATGATTCAGTTTAGTA     CTTTAAGCCATTTTA  65 54
        rpoC  680435 ..  680465 + -10.7  -5.00642   GGAATAACAAGTATA      TAACA-GAGGCTAA TGCT TTAGCCTCTTGTTA       TTTTTATGTAAATTA 100 34
SAHC1340_RS03415  680821 ..  680843 +  -8.6  -3.52628   TTGATTAAATGAGAA           TTAGTAAGTG TTT TACTTACTAA           ATTTTATTTAACCTA  76 29
        rpsL  681325 ..  681336 +    -3  -4.89009   TAAGAAACCTAAAAA                CTAA GAAT TTAG                 TTTTTAATTAAATCT  65 22
        rpsG  681926 ..  681940 +  -4.2  -3.05294   TTAAGCGTTCATGCT               TAGGGC ATC GCCATA               TCTATCGTATTTATT  48 87
        fusA  684208 ..  684240 + -10.8  -2.67958   CATCGCTATAAATAA      TTTCTCATGATGGT GAGAA ACTATCATGAGAGA      TAAATTTAAATATTA  84 165
         tuf  685502 ..  685521 +   -10  -5.60864   TTTATATAAAAAGAA            GATCCCTC AATC GAGGGGTC             TTTTTTTAATGTGTA 100 58
SAHC1340_RS03445  688296 ..  688320 + -10.7  -5.66989   TTAATATTTATTTAT          TCCCACGGCAA ATA TTGTCGTGGGC          TTTTTTTAATGTTTA 100 37
        hchA  689446 ..  689474 +  -5.4  -5.75342   AAATATTAATTAGAG       GAG-CCTCATATG TAAA TGTATGAGGGCTC        TTTTTTTTGGCAAAA  93 43
SAHC1340_RS03455  691353 ..  691363 +  -2.6  -3.79906   TACAAGAAAGCGCTT                 TTAT ATT ATAA                 TTATTATGAAAATGA  49 154
SAHC1340_RS03460  692648 ..  692658 +  -2.6  -4.15044   TTAATTAATTTTGAA                 TTTT TAG AAAA                 TTTGTTGAACAGCAA  53 270
SAHC1340_RS03465  694059 ..  694075 +  -2.3   -4.0031   AAATAGGAGTATTGA              TATCAAT GGA ATGGATA              TTATTTGATAAAGAT  50 270
SAHC1340_RS03470  694887 ..  694905 +  -4.6  -3.60309   ATCTACTTGTCGATA             TGTTTGAA TAA TTCGAGCA             ATTTTGTTTATCATA  55 165
SAHC1340_RS03485 NONE
SAHC1340_RS03490 NONE
SAHC1340_RS03495  698307 ..  698359 +  -3.8  -5.58179   AATATACATTAAAAA TAGGTATGTAGCTTAA-GGTATT-TC ATT GAGAATGCTTTTAAGTCACATGCCTA TTTTTTGTTCTAATG  80 57
SAHC1340_RS03500  701492 ..  701510 +  -8.1  -5.56264   ATATGATTAACTTAA             CCAGGTC CATGT GGCCTGG             TTTTTTCTGTTTAGA 100 40
        sdrD  706001 ..  706019 +  -8.1  -5.63517   ATAATACAGCTTATA             CCAGGTC CGTGA GGCCTGG             TTTTTTATTTCAAAA 100 37
SAHC1340_RS03515  711507 ..  711518 +  -4.4   -3.2655   TATTTAACAAACCTC                GTTC ATAC GAAC                 TTACATGTTTAGTTA  52 74
        nagB  716298 ..  716316 +  -2.4  -3.37901   AAAATGTTGCGAAAA             TTCATGTC GAT GAAATGGA             TTGATTGCAATGTTT  45 3
        hxlA NONE
        hxlB  717588 ..  717628 +  -2.8  -5.96894   AGAATAAAATAAAGA TAGTCGATAATA-TGATGC CTAG GCAGAAATATTATCGATTA  TTTTTTTATTTAAAT  82 34
SAHC1340_RS03555  718574 ..  718616 + -11.5  -4.95876   ATACGATGTCGAAAA TGGCGATAGCATATCACTT ACATG AAGTTGTGTGCTATCGCTA TTTTTAGTTATAATT 100 260
SAHC1340_RS03560  720278 ..  720316 +   -17  -4.74103   ATCAATCGTATATAA   GCACTTTAAAGCTAGTAG GTT CTGCTAACTTTAAAGTGC   TTTTTAAATTGAGAA 100 62
SAHC1340_RS03565 NONE
SAHC1340_RS03570 NONE
SAHC1340_RS03575 NONE
SAHC1340_RS03580  724313 ..  724329 +  -2.3  -3.61674   CTTTGCTACTCTATG              GTTATAT TAT AAATAAC              ATTTTTATGTGTGAC  46 424
SAHC1340_RS03595 NONE
SAHC1340_RS03600  726864 ..  726880 +  -4.5  -2.95884   AATGAAACATAATTA              CTTAATA GCT TGTTAAG              TATGTAGGTTAATAA  50 49
SAHC1340_RS03605  727418 ..  727452 +    -5  -5.38054   AAAAAGAGTTACAAA     CTCATCTTTTGGGTAT AGA ATACCTTCGAGGTGAG     TTTTTATTTATGGAA  79 102
SAHC1340_RS03610  728955 ..  728995 +  -4.7   -5.5208   TAAATAATAAAAGAA  TCGCACAATAAACCTTC TTCATTC GGAGGCGTATCGTGCGA  TTTTTTGTATTATAA  79 34
         pta NONE
SAHC1340_RS03635  733620 ..  733655 +  -4.6  -4.61231   CAATAGTTAAATATT    TAACAGCCCCTTTCAA GTTA TCGTTTGGGGCTGTTA     TTTTTGAAAGTATCC  66 35
         mvk NONE
        mvaD NONE
SAHC1340_RS03650 NONE
SAHC1340_RS03655  737715 ..  737749 +  -9.4  -5.32599   AGCACAACAATAAAG    CCTGATGGCA-GCAT CATTCA ATGCGTGCCACCAGG     TTTTTATGTTTTGTC 100 28
SAHC1340_RS03670  739772 ..  739786 +    -5  -4.49756   TTGTATAAACTTATT               CGTATT TTA GATACG               TTTTGATATTTCGCA  68 125
SAHC1340_RS03675 NONE
SAHC1340_RS03680 NONE
SAHC1340_RS03685  743224 ..  743245 +  -3.1  -2.52623   AACACTGTTAAGCCA           GTTAAAAAT AAAA ATTTTTGGC            CTGTTGTAGGAGGAA  42 305
SAHC1340_RS03695 NONE
SAHC1340_RS03705 NONE
SAHC1340_RS03710 NONE
SAHC1340_RS03715  746714 ..  746728 +  -3.6  -2.81339   AAATTCAAGCTCTAA               TTCTAA CAT TTGGAA               GTTGTATTAAATCAT  45 219
SAHC1340_RS03720  747809 ..  747826 +  -4.1   -3.0247   GACGTTATATAAGGC             ATGACGA AATT TCGTCAA              ATTTATATAAAAGTT  48 106
SAHC1340_RS03725  748491 ..  748516 +  -3.3  -5.95286   GACATACCTCATACT         AAACGAAGTGA TTTT TTGCTTCGTTA          TTTTTTATTTTTAAT  90 41
SAHC1340_RS03730 NONE
SAHC1340_RS03735 NONE
SAHC1340_RS03740  751198 ..  751213 +  -6.2  -3.41051   CATAGCTATATACTT              TGTGAA TTAA TTCACA               TTATAATAAGAGTGA  62 219
        adhP  752576 ..  752611 + -10.6  -5.46698   ATCATTATAATCAAA    CACGAGGTTTTCATGA AAGA TAGTGAAAATCTCGTG     TTTTTTGGTTTTGAG 100 88
SAHC1340_RS03750  752741 ..  752751 +  -2.6  -3.73486   CAAGATGACCTTATT                 TTAT GCT ATAA                 TATTTCTATTATGCG  49 71
SAHC1340_RS03755 NONE
SAHC1340_RS03760  754876 ..  754919 + -14.8  -5.83822   AAGAACATTTATATA CACTCCAACGTAGAGTTTCT CGAA AGATACTTTGTGTTGGAGTG TTTTTTTTAGGTATG 100 39
SAHC1340_RS03765  756067 ..  756095 +  -3.1  -2.80816   GAGTAAAGGAATACA        GTTGTTTGTGCAG CAA CTGCATAAAAGCC        TCTAATCACTAAAGG  43 206
SAHC1340_RS03770  757168 ..  757211 +  -6.9   -4.6644   ACCATTCTAATTATG CCCCTTATTGC-TACATGTA AAAAA TACATGTTTGAGATAAGGGG TTTTTAAAATATATT  79 41
SAHC1340_RS03775 NONE
SAHC1340_RS03780 NONE
SAHC1340_RS03785  759846 ..  759856 +  -2.6  -2.88069   AAAAGTAGTAATTAT                 TATT TGT AATA                 TAATTGTAATATGAC  41 63
SAHC1340_RS03790  760470 ..  760504 +  -8.8  -4.67982   TAAATTAATCGTGCT     TAACCGACAAGT TAAATCGCAAT ACTTGTCGGTTA     TTTTATTACATGGCA  90 45
SAHC1340_RS03795  761340 ..  761377 +  -8.1  -5.95946   ATAAATATGATAAAA   CTATTCA-CTTGATTAAT TGT ATTAATTGAGATGAATAG   TTTTTTTATTGTTGG 100 37
SAHC1340_RS03800  762335 ..  762368 +  -6.2  -5.45726   AGGCAATGTGAAAAA     GCTGATTACTATTCA TTATT TGA-TAGAAATCAGC     TTTTTTTGAAATGTA  89 75
SAHC1340_RS03825 NONE
       mnhA2 NONE
       mnhB2 NONE
       mnhC2 NONE
       mnhD2 NONE
       mnhE2 NONE
       mnhF2 NONE
       mnhG2  772066 ..  772105 +  -4.4   -5.5208   AAATTAATCATTAAA  AGAGTACTTTGAAATTGG TTAG TCGATTTTAAGGTGCTCA   TTTTTTGTATTATAA  78 92
SAHC1340_RS03865  774395 ..  774442 + -19.6  -4.09739   AGTTCCTAATTATGC TAAAAGGGATTGATGAAAAACT GAAG GGCTTTTCATCAATCCCTTTTA TTTTAGGGGAATTGA 100 39
SAHC1340_RS03885  778848 ..  778864 +  -3.7  -3.87543   ACTCATTGTGACAAG              TAGTTGA ATT TCTACTA              TATTTTCATCTTTTA  55 333
SAHC1340_RS03895  780393 ..  780422 +  -4.2  -5.25805   ATGACAAAAATAAAA       CCGAGGAAATCC TTAAAT GGAGATTCTCGG        TTTTTTCGGTTTATT  74 46
        tagG  782405 ..  782435 +  -6.9  -4.00347   ATTTATATGACGAAA      CCCCGCTAACCATT AATA AATGGA-AGTGGGG       TTCATTTTTGTTTAT  70 44
SAHC1340_RS03910 NONE
SAHC1340_RS03915 NONE
        tagD  785172 ..  785210 +  -9.7  -4.91573   AAAATAAATATAAAA   CGGACAAGTTTCGCA GCTTTATAA TGTGCAACTTGTCCG   TTTTTAGTATGTTTT 100 90
SAHC1340_RS03930  788971 ..  788982 +    -3  -3.62505   CCACGGTACAGAAGT                TTGA TATT TCAA                 TGTTTCTAAATTTTT  49 329
SAHC1340_RS03935  790301 ..  790342 + -13.9  -5.66229   TTAACTAATAAATAT GTCCAGGCATGTCGTCTAT TGAT ATAGGTGAGATGCTTGGAC  TTTTTTATTATTGAT 100 71
SAHC1340_RS03940  790713 ..  790723 +  -3.2  -3.72119   AACTCTTTCCATAGA                 GTTG TGA CAGC                 ATTTTTGTTGTGCTA  51 136
SAHC1340_RS03945  791646 ..  791690 +  -3.6  -5.86976   ACATACTTAAATAGA AGTCCACGGACAAGTTTTTG AACTA TGAAGACTTATCTGTGGGCG TTTTTTATTTTATAA  84 58
SAHC1340_RS03950 NONE
SAHC1340_RS03955 NONE
SAHC1340_RS03960  794766 ..  794804 + -10.6  -5.68438   ATGGACACAACTTAT  TGCTATGAAAGGCACTT TATTAT AAG-GCTTTTCATAGCA   TTTTTTATTTAATGA 100 46
        dhaK NONE
        dhaL NONE
SAHC1340_RS03975  796963 ..  796974 +    -3  -2.92102   AAAAATGTAAACCTT                TTTC AAAT GAAA                 CTTTATAAAAAATAT  43 60
SAHC1340_RS03980  797589 ..  797609 +  -2.5   -5.2189   TTTAACATTTGGTTG            GGTTGGG CATATGT TCCAGCC            TTTTTTAATACTTAA  68 73
SAHC1340_RS03985  799123 ..  799155 +  -3.5  -5.28414   GTTTTAACCTTAAAA     GCAATTCGTCTCTA CTCTTA TCG-GGCGAATTGC      TTTTTATATTTATTC  72 84
SAHC1340_RS03990  800426 ..  800437 +    -3  -4.11216   GTGACATTTATTTTA                CAAA CTAA TTTG                 TTTTGAACCTGAAAA  55 193
SAHC1340_RS04000  801026 ..  801081 + -13.1  -4.37198   ACTAAACAACATATA TAAAGCACCACTAAT-CGTAGTTGAT AGTTA ATCAATTACACATTAGTGGTGTTTTA TTTTGAATTTAAATT 100 36
SAHC1340_RS04010 NONE
SAHC1340_RS04015 NONE
SAHC1340_RS04020 NONE
SAHC1340_RS04025 NONE
SAHC1340_RS04030  807286 ..  807332 +  -7.5  -5.20333   TAAAATATACAGATG GCTTTCAGTAGAG-TAGTGGAT TCGG ATTCACGAACTATACTGGAAGC TTTTTATTATAAATG  91 38
SAHC1340_RS04035 NONE
SAHC1340_RS04040  809656 ..  809698 + -13.7  -5.38047   GAAAATAAAACTAAA CTGAACTTCAGTATCACAA ACATA TGGTGGTATTGAAGTTCAG TTTTTTATGTAAGTA 100 43
SAHC1340_RS04050  812412 ..  812434 +  -3.6  -2.91264   TGATTTAAATAAGTG           TTTATTTTTA AAT TGAAAATGAA           TATATAACTAACAAA  45 409
SAHC1340_RS04055  814891 ..  814908 +  -4.2  -4.31737   CACCTTGATATGTAT             TGCAAA ATTTAA TTTGCA              TTTGTTGGTAATTTT  61 41
        sarX  815390 ..  815423 +  -3.9  -5.04601   ATTTAATTGAAATTG     AGTGTCGA-AAGCATA GAA TTTGCTTATCGGCACA     TTTTTAATTTATACA  71 35
SAHC1340_RS04065  816264 ..  816276 +  -4.1  -3.62096   ATGTACAAAACGTAT                TCCAT AAT GTGGA                TTTGAAATAATGAAA  52 3
SAHC1340_RS04070  816770 ..  816812 +  -9.4  -5.09685   AATAAAAGTGATCAA TGAAGTGGTTTGAAGGTT GTTAATA AACCTTTGAGTCACTTCA TTTTTATATGTATTC 100 36
SAHC1340_RS04075 NONE
SAHC1340_RS04080  817840 ..  817852 +  -4.9  -3.00946   TTGTAGCCATGAAAG                TTCAA TAA TTGAA                TAATTTATGGGGGGA  52 109
SAHC1340_RS04085  818736 ..  818748 +  -2.7  -2.84528   GAACAACCAAAGGCG                TAGTT TTA GACTA                ATTTAAGGTTTGTAT  41 23
SAHC1340_RS04095 NONE
SAHC1340_RS04100 NONE
SAHC1340_RS04110 NONE
SAHC1340_RS04115  822646 ..  822660 +  -2.8  -3.15147   GGTACAGCGTTTTAA               ACCTTA TTT TAAGGG               TATGTATTAATTAAA  43 69
SAHC1340_RS04120  823054 ..  823083 +  -4.4   -5.4505   AACTGCTATCTAAAA       CGCAAAGTTGAT CAAAAT ATCGATTTTGTG        TTTTTTATTGAGAAA  78 40
SAHC1340_RS04125  823680 ..  823737 + -11.8  -5.09426   ATTTATACATAAGCG T-AACAAACACCCCTAACATTGTTTAGC TGAT GATAA-CAATATTAGGGGTGTTTGTTTA TTTTTTAACCTTAGA 100 44
SAHC1340_RS04150 NONE
SAHC1340_RS04155  830042 ..  830073 + -10.2  -5.08824   TAATGCATAAAAAAA      CTGCTTGATAGGCT AAGA AACCTTTCAAGCAG       TTTTTTAACTAACAA 100 31
SAHC1340_RS04165  831818 ..  831828 +  -2.6  -4.42788   ATTTCTTAATACTTT                 TATT GTG AATA                 TTTTGTGACATTGAG  55 84
SAHC1340_RS04170  832767 ..  832780 +  -3.9  -4.21194   CGGACAAGATATTCC               GTAAA CTTA TTTAC                TTTTAAATCATAAAG  58 22
SAHC1340_RS04175  833305 ..  833323 +  -3.2  -4.12599   AAATTGTGTATTTTG             CATAAATT AAA AATGTATG             TTTTAAAAAATTGTT  55 238
SAHC1340_RS04180 NONE
SAHC1340_RS04185  836461 ..  836494 + -12.7  -3.75933   AAGCAATATAAATAA     GCCAATTTCTATTAT TGAT GTGATAGAAATTGGC      TTTCCTCAAATATAT 100 99
SAHC1340_RS04200  839043 ..  839062 +  -4.3  -3.55071   GTAAGAATGATTTCA            GCAGTTG CAGAAA CAATTGC             TTTAGCGAGATGTCC  55 449
        norA  840876 ..  840892 +  -2.3  -4.35646   TAAAAAGATTCGATT              GACTAAA TGT TTTACTC              TTTATATTTAAATGT  55 146
SAHC1340_RS04215  841510 ..  841534 +  -5.8  -5.46706   AAATAATAGATGGAA          CAGTGTATTC TAATT GGATATACTG          TTTTTATTTTGCAAT  86 35
        ybaK  842189 ..  842238 + -18.9  -4.90013   TATGGGGCAAGATTA GGAGTGTGACAGAGATGAAATTT TTAT AAAATTCATTTCTGCCACACTCC TTTTTGATTGAATTA 100 58
SAHC1340_RS04225 NONE
        pfkB NONE
SAHC1340_RS04235  846167 ..  846208 +  -7.7  -5.63236   ACAAAGCTGTAAAAA CACTTTC-TATTAATTCA GTTTTTA TGAATTGATATGAAAGTG TTTTTATTTTTAGAT 100 141
        nagA  847740 ..  847755 +  -7.6  -2.60571   TAACATGGAGGTGAA              TCCCTA GAAA TAGGGA               ATTAATTGGAAACTT  65 225
SAHC1340_RS04250  849126 ..  849159 +  -9.8   -4.8236   ATATTAATATATAAA     CCAACTAAGAATGA TTTAAT TCATTTTTGGTTGG      TTATTTTTTTGACTA 100 41
SAHC1340_RS04255 NONE
        csbB  851296 ..  851319 +  -7.4  -4.93696   AAATAAACAAAAAAA          GAAGCCCTCA TTAA TGGGAGCTTC           TTTTTAGTCTTTGCA  85 35
SAHC1340_RS04310 NONE
SAHC1340_RS04315  860951 ..  860961 +  -2.6  -3.54424   ATTTTGGAGATGTTA                 TAAT GCA ATTA                 TTTGAAACAATGAAA  47 23
SAHC1340_RS04320 NONE
SAHC1340_RS04325 NONE
SAHC1340_RS04330 NONE
SAHC1340_RS04335  863829 ..  863843 +  -5.8  -3.38316   ATTACAATTTGATTA               CAAATT TTA AATTTG               TTAATTGAATGATAA  60 235
        ltaS  866048 ..  866074 + -14.6  -5.31072   ATATCTAAACACGAA         CTCGGATTGATA AAA TATCAATCCGGG         TTTTTATTATGTTCT 100 40
SAHC1340_RS04350 NONE
        recQ  869987 ..  870018 +  -5.3  -5.53288   AAAGTATAGTGAAGA      CACCTAGT-AAGCA TTCCT TGTTTTACTGGGTG      TTTTTTTGAATTCAA  82 32
SAHC1340_RS04360 NONE
SAHC1340_RS04365  872691 ..  872739 +  -9.1  -3.85256   TAATCAAATAACGAC CAACGCCACATAAGATGCG TAACACCAAAT TATATCTTATGTGGCGTTG TTATATTTAAATCTA  82 30
        hisC  874061 ..  874080 +  -9.4   -3.6761   CTTGCATTGTCTGTA            GAAATTGG GAAT CCAATTTC             TCTTTGTTGGGGCCC  84 102
SAHC1340_RS04375  875161 ..  875181 + -12.7  -3.61527   AATTAGTATTTCTTA            TGCATGAGT GTA ACTCATGCA            TTCATATTTTTAAGT 100 309
SAHC1340_RS04390  876695 ..  876720 +  -9.1  -5.15969   AAACCTATAAAAAAA         CAGTAAGCCAT TTAA ATGACTTACTG          TTTTTTGAATTAGGC  95 54
        nrdI NONE
        nrdE  883262 ..  883314 +  -5.2  -3.36059   TTAAATGTTGAAAAT GACA-AACAG-CTAATCATCTGGT CTGAATT AGCAGATGATTAGACTGCTATGTC TGTATTTGTCAATTA  57 44
        nrdF  884392 ..  884406 +  -4.2  -4.51477   CGTTTCGTCTTGTCT               CCTACA TGT TGAAGG               TCTTTTTTTATGTGT  63 85
SAHC1340_RS04430  884979 ..  885017 +    -7  -3.53012   CAAAAAACGCTACTA   TTAATGAGAAATATTATC AAT GATAATGATTATCATTAA   TTTAAAGGGAGAAAA  69 3
SAHC1340_RS04435 NONE
SAHC1340_RS04440 NONE
SAHC1340_RS04445  887766 ..  887776 +  -2.6  -4.33928   AAGAAGGGTTAAACG                 TAAA GCA TTTA                 TTTATATTTCACATC  55 79
SAHC1340_RS04450  888863 ..  888913 + -16.5  -3.53091   GTTGTAAAATAATTT TAAAAGAGGGGAACAATGGTTAA AGGTC TTAATCATTGCTCCCCTCTTTTC TTTAAAAAAGGAAAT 100 29
SAHC1340_RS04470  892087 ..  892107 +  -6.3   -4.0616   TAACTATAATCATTT            TTCAAAGTT AAA AATTTTGAA            TTTATGGTTAACATG  68 38
        ytxJ  892725 ..  892741 +  -3.1  -4.07568   TATAATATATTCGAG              TATTTTT ATT GAAAATA              TTTTGGAAAACGACG  55 202
SAHC1340_RS04480  894203 ..  894234 + -10.3  -5.10968   AAAAAATATGAAAAA      TCACGCTATCATT GCACTG AATGTTAGCGTGA       TTTTTATATATTAAT 100 131
SAHC1340_RS04505  899738 ..  899756 +  -2.5  -4.21141   ACATCGATATAGTAG            CTTAC-CT TATC AGTGTAAG             TTTGGTTTCTTAACA  55 325
SAHC1340_RS04515  901291 ..  901303 +  -3.5  -2.98223   AAAGAGTCTATATTG                TAATT GGA AATTA                TCTCTCGTATACATG  46 57
SAHC1340_RS04520 NONE
SAHC1340_RS04525 NONE
        raiA  904018 ..  904041 + -11.8  -5.31275   TAAATTAAGTTTAAA          GCACTTGTGT TTTT GCACAAGTGC           TTTTTTATACTCCAA 100 38
        secA NONE
SAHC1340_RS04540  907171 ..  907181 +    -4  -3.56099   TGTGCTTATATTTCT                 TAAC ATT GTTA                 TTTAACAAAATTATG  52 100
        prfB  908390 ..  908412 +  -9.8  -5.31158   ATATATATTTTAAAA           CCGAGGCTCT AAA AGGGCGTCGG           TTTTTGGTTTTTTTA 100 40
SAHC1340_RS04550  908714 ..  908724 +  -2.6   -3.2178   CGTTATAACAATAGC                 TTTT GAC AAAA                 TGTATTGTGCTATAG  43 103
SAHC1340_RS04555  909646 ..  909680 + -14.5   -5.2422   ATCAAGACAAGACTA     TCCTCTTAGCCTGTT TAAGT AACAGGTTGAGAGGA     TTTTTTGGTATCATT 100 48
SAHC1340_RS04560 NONE
SAHC1340_RS04565  910789 ..  910815 +  -8.9  -5.47159   CGATTTGATTTAAGG         CAAGCATAGTT AGCAC AACTATGTTTG         TTTTTCTTTGTTCGA 100 134
        uvrB NONE
        uvrA  915797 ..  915831 +  -7.3  -5.24551   TAAATAAGATTAAAA     GAAGTGAAGGATG TTATAAATT TATCCTTCGCTTC     TTTTTATTAATTTAG  91 34
SAHC1340_RS04580 NONE
SAHC1340_RS04585 NONE
SAHC1340_RS04590 NONE
SAHC1340_RS04595 NONE
        trxB  921551 ..  921570 +  -9.4  -3.09273   CTTGCATTGTCTGTA            GAAATTGG GAAT CCAATTTC             TCTATGTTGGGGCCC  78 462
        rapZ NONE
SAHC1340_RS04615  924081 ..  924115 +  -7.3  -3.38046   AATGCAAAAGCAGAG    CTCAGTGCACTGATTC GAAT GAAT-GGTGCACTTAG     TCTTTCAAATCAACA  67 207
        clpP  926238 ..  926279 + -14.7  -2.52776   TGAACCGTAACTATA TGAAATGTTCCCTTCAAAG TAGA CATTGAAAGGAACATTTCA  ATCCTTTGTTTGTAA 100 151
SAHC1340_RS04640  928815 ..  928834 +  -9.4  -3.09273   CTTCCATTGCCTGTA            GAAATTGG AAAT CCAATTTC             TCTATGTTGGGGCCC  78 251
SAHC1340_RS04645  930250 ..  930260 +  -2.6  -2.55763   TACTTGAATAAGAGA                 TAAA AAG TTTA                 ATACTTTTTAAATAT  40 30
         gap  931377 ..  931407 +  -8.4  -4.98522   ATTAAAGCTTATGAG      TAAGCGG-GGAGC ACAAAC GCTTCTCCGCTTA       TTTTTATATAAAATT  95 94
SAHC1340_RS04655  932699 ..  932713 +  -2.8  -3.84284   ACGGGAAAACAGTCA               CAAGAT GAC ATCGTG               TTTCATCACTTTTCA  49 87
SAHC1340_RS04660 NONE
SAHC1340_RS04665  935137 ..  935147 +  -2.6  -2.60615   ATAAAGCTATAATAA                 TTAT AGA ATAA                 CTATTTAAAGGAGAT  40 122
         eno  936587 ..  936614 +  -9.2  -5.79595   CGCTTAAATTTATAG        CCTGCCACAG AGTTGAGA CTGTGGTAGG         TTTTTTATTTTGAAG 100 138
SAHC1340_RS04675 NONE
        secG  937574 ..  937596 +    -4  -5.73978   ATCTTGGTATGTAAG           GTCCGGCGAT GTA AATGTCGGGC           TTTTTTATTTATAAT  80 27
SAHC1340_RS04685 NONE
         rnr NONE
        smpB  941367 ..  941385 +    -9   -3.1541   ATATAGTTATATGTG             CTTTTGTA AAT TACAAAAG             TATGATTTGTTTGAT  78 72
        ssrA  941778 ..  941802 +   -10   -5.8901   GTCTCCATATTTGTA          GCCTACAGCC TTTGT GGTTGTGGGC          TTTTTTATTTTGTGT 100 31
SAHC1340_RS04725  944643 ..  944657 +  -2.9  -3.63805   GGAGGGTTGATATCT               TAATG ATTAA CATTA               TTTCAGCTATAGGAT  49 31
SAHC1340_RS04730 NONE
SAHC1340_RS04735  945993 ..  946006 +  -2.4   -4.4084   ATCGATACAAATTAA               TTGC TATAAT GCAA                TTTTAGTGTATAATT  55 183
        clfA  948940 ..  948957 + -11.3  -5.29385   ATGATTCATGAAGAA             GCCACCT TAAA AGGTGGC              TTTTTTACTTGGATT 100 66
         vwb  950751 ..  950786 +  -5.7  -5.24449   CAATGATGCAATCTA   GTA-TAGTCCACATTCT AAAC AGG-TGTGGACTATTAC    TTTTTTCACTTTATA  84 130
         emp  952068 ..  952100 +  -8.6   -5.1361   ACCTATTATTTTAAA      TATAGTCTACAATC TATGT GGTTGTAGGCTGTA      TTTTTTGCAGTTTAT  95 74
SAHC1340_RS04755  952955 ..  952979 +    -5   -5.0925   TGTCTCGATATGATA          GTCTGCAACG ATTCA TGTTGTAGGC          TTTTTAATTTTACAA  74 156
SAHC1340_RS04760  953858 ..  953895 + -12.3  -4.66163   GGTCAATAATGCTCA   TTGTAAAAGTGTCACTG CTGC TAGTGGCACTTTTATAA    TTTTTAGATCACGAT 100 32
SAHC1340_RS04770  955757 ..  955776 +  -5.7  -5.75599   TTTAACTTATTCAAA            CAGTCCT TACTAT AGGGCTG             TTTTTTTATGCTTTA  95 42
SAHC1340_RS04805  960203 ..  960221 +  -5.4  -2.61264   CATTTTGTGGATTCA             CATAATTA CAT TGATTATG             ATTATCCATAAACAC  51 231
SAHC1340_RS04815  961045 ..  961083 +  -8.4  -4.13945   TTTATAATAAATAAA  GCGTTATAC-ATAGACA CAAGTA TGTCTTTTGTATAACGC   TTTTAAAATACAACT  81 34
SAHC1340_RS04835 NONE
SAHC1340_RS04840  964743 ..  964761 +  -3.2  -3.16881   ATGGACATCTATCGA             GTTAGA GATTTAA TCTAAC             TTACTAGAGTCGGTA  46 86
SAHC1340_RS04850  965671 ..  965690 +  -6.6  -2.63164   AAATGTAAGCGTTTA            CTAAATAT CTCG ATATTTAG             ATTCATTACATGTAA  60 44
        gcvH  966202 ..  966224 + -11.4  -4.94262   ATAATCACCGTGTAA           CTCCTTAATC TAA GATTGAGGAG           TTTATTTTTAGTCTG 100 37
SAHC1340_RS04865  967397 ..  967415 + -10.3  -3.20164   ATCCAATTTCTCTTT             GTTGGGG CCCAT CCCCAAC             TTGCATTGCCTGTAG  86 175
SAHC1340_RS04875 NONE
SAHC1340_RS04880  968841 ..  968876 +  -8.5  -5.92399   AAACAATACTACTAT    TGCTTTCTCAATTTT TCTATC GATATTGAGAAAGCA     TTTTTTATTTTATTA 100 202
SAHC1340_RS04885 NONE
SAHC1340_RS04890 NONE
SAHC1340_RS04895  971486 ..  971510 +  -5.1  -4.98911   AATTAAATAGAAATA          CCCTTTAAT GACAACG ATTAAGGGG          TTTATTTTTGTGGTA  72 45
SAHC1340_RS04915 NONE
SAHC1340_RS04920 NONE
SAHC1340_RS16125 NONE
SAHC1340_RS04925 NONE
SAHC1340_RS04930 NONE
SAHC1340_RS04935 NONE
SAHC1340_RS04940 NONE
SAHC1340_RS04945  979407 ..  979419 +  -3.4  -4.66609   TTATATAAAATACGG                GTAC AACGG GTAC                TTTTTGCATAAAGTA  64 216
SAHC1340_RS04950 NONE
SAHC1340_RS04955  980650 ..  980667 +  -2.7  -4.91511   TTTTATTAACGCTAA             TACAAGC TAAA GTTTGTG              TTTTTATCATAGGGT  63 111
SAHC1340_RS04960 NONE
SAHC1340_RS04965 NONE
SAHC1340_RS04970  982088 ..  982108 +    -9  -3.33798   TAAATAGCAATGATT            GCCTATCC AATTC GGGTAGGC            TCTGTTTATAGGGGT  79 34
SAHC1340_RS04975 NONE
SAHC1340_RS16130 NONE
SAHC1340_RS04985  983935 ..  983956 + -13.1  -5.27335   AAAGCATATACACGG           TGACAGCGT AGGG ACGCTGTCA            TTTTTGTTTACAGAA 100 393
SAHC1340_RS04990 NONE
SAHC1340_RS04995  985321 ..  985335 +  -4.3  -2.71268   ATTCTGTGTATAAAA               TTGGT CATGA ACCAA               TAGTATATCATAAAC  48 407
SAHC1340_RS05005  986453 ..  986484 +  -9.5   -5.0916   AATACACTGCACATG      CCACTTAGTCGGT ATAACC ATCGGCTAGGTGG       TTTTTGTATTAAAAA 100 58
        sufC  988619 ..  988647 +  -2.5  -3.87075   ACAGTATCCATGAGA        TGTTCATCTATAT ATG ATGAAAATGAACA        TTTATACGAAATAGT  49 51
        sufD NONE
SAHC1340_RS05025 NONE
SAHC1340_RS05030 NONE
        sufB  993436 ..  993451 +    -9  -6.14618   TGAATATAACAAAAA              GCCACA TTAC TGTGGC               TTTTTTTGTTTTATA 100 105
SAHC1340_RS05040  993896 ..  993908 +  -6.3  -4.28188   TAAGCTTCGACTAAG                TGCAT AAT ATGCA                TTTATATTATGGCTA  74 241
SAHC1340_RS05050 NONE
SAHC1340_RS05055 NONE
SAHC1340_RS05060 NONE
SAHC1340_RS05065 NONE
SAHC1340_RS05070 NONE
SAHC1340_RS05075  999753 ..  999767 +  -2.9  -3.73816   TAAGATTATTGGATT               TTCAT TTGTC ATGAA               TTTCGATATAATGTT  51 45
        lipA 1000728 .. 1000744 +  -2.3  -3.14931   TGAGGCACAGTTAAA              TAGTTAA TAT TTAACCA              TTAATAAGGCATAAA  43 19
SAHC1340_RS05085 1001330 .. 1001341 +    -3  -3.68827   GGTTTTTATCTTTAA                TGAA TGAC TTCA                 TTTAAATACTCAGTA  49 108
SAHC1340_RS05095 NONE
SAHC1340_RS05100 NONE
SAHC1340_RS05105 1004006 .. 1004035 +  -9.5  -4.20806   AATTCAATAACATTA       TAAACTCGTCATA TTAA TGTGATGAGTTTA        TTTGATTTTGACGTA  88 136
SAHC1340_RS05110 1004277 .. 1004291 +  -3.6  -3.55563   GGTCTTTATAAAGGC               GTTTTT ACT AAGAAC               TTTAAGAGGTGCAAT  50 43
SAHC1340_RS05115 1004440 .. 1004452 +  -4.9  -2.64099   ACACACACAATAACT                TCATT TAT AATGA                GTTCTAATGAGGGAG  50 6
        dltA NONE
        dltB NONE
        dltC NONE
        dltD 1008578 .. 1008617 +  -3.1  -5.28983   AAATTAAAATACAAA TAGCACATA-ACTCAA-CG ATTT TGATTGAGCGTATGTGCTA  TTTTTATATTTTAAA  70 34
SAHC1340_RS05145 1009516 .. 1009547 +  -8.9   -5.0925   TACACATAACTAAAA      GCAATGTCAGT AATAGTGTGA ACTGACATTGC       TTTTTAATTTTAACC  95 43
SAHC1340_RS05155 NONE
SAHC1340_RS05160 1011610 .. 1011629 +  -6.5  -3.94812   ATCAATAACGATTAA            GGACATA TTTGAT TATGTCC             TATTTTTGCGTAAAG  68 89
SAHC1340_RS05165 1013258 .. 1013288 + -16.4  -3.83262   TAAATTATTCATTTA       TAAAGTCCTTCAGT GTC ACTGAAGGGCTTTA       TTGTTGTACAATTTG 100 75
SAHC1340_RS05170 1014830 .. 1014844 +    -5  -3.31598   TTTAATTATTTGCCT               GATACA ACT TGTGTC               TTGATATACATTTCT  53 41
SAHC1340_RS05175 NONE
SAHC1340_RS05180 1016940 .. 1016984 +  -7.4    -5.626   TTTAAAATAAAAGAA CTGCTAGCTGAAATGTTATGAG ATA TTCATAAC-TA-CGGCTAGCAG TTTTTTTATGCGCTA 100 31
SAHC1340_RS05230 1025423 .. 1025444 +  -2.3  -3.85698   AAATAAATAAACTAA           TATGATGAG CAAT CTCAATATA            TTTATCAAGAAAGCA  48 120
SAHC1340_RS05235 1026189 .. 1026227 + -16.4   -4.9792   TCTTAGACTATAAAA   GAGATTAGTATCTATTAA ATT TTATTAGATACTAATCTC   TTTTTGTCTACGATA 100 93
SAHC1340_RS05240 1027625 .. 1027659 +  -4.5  -4.33907   AGTGTTTAACTGTTA    CCACTAATGATATTGT GTAT GCAAT-TTGTTAGTGG     TTTTCAATATTTATA  64 40
SAHC1340_RS05245 NONE
SAHC1340_RS05250 1030480 .. 1030521 +  -9.6  -5.08255   ATTATCATATGTGAT TTAACGAGCTTGGGAC AGAAAACAAA GCCCTAAGCTCGTTAA  TTTTATTTTAGCAGT 100 44
SAHC1340_RS05270 1036293 .. 1036334 + -16.2  -5.42975   TTTAAAGCATATTTT CGAGGTTGTCATTACA AATGTAAAAA TGTAATGACAACCTCG  TTTTTATTTATATGC 100 97
SAHC1340_RS05275 NONE
        lepB NONE
        lepB 1038253 .. 1038296 + -11.3  -4.71426   TTAATATGAAACAAA TACAACATCGTTTGTCGGT TTTAAT ACTGATAAACGATGTTTTA TTTTGTTAGTACCAC 100 37
        addB NONE
        addA 1045695 .. 1045705 +    -4  -3.52093   TGAGGAGTTGAGAAT                 GAAT GAA ATTC                 TTATCATTCAAGTAT  52 189
SAHC1340_RS05300 1046615 .. 1046642 +  -9.3  -5.61689   TTATCATTTAAAAAG        CTAACCAGTCT TTATAT AGATTGGTTAG         TTTTTTCTTGCTTTT 100 41
SAHC1340_RS05305 1047339 .. 1047379 + -10.6  -5.32944   AGACATATAGTATAT GACATAAGG-CATGGACAA TTAT TAGTCCAAGACCTTATGTC  TTTTTTGATTCTAAA 100 47
SAHC1340_RS05320 1050200 .. 1050245 + -11.3  -3.13947   ATTCATTGTGAATAA GCTCCCTTCAAAGTAGACATT GAAA AATGAAAATTTTGAAGGGAGC CTTATTTATGTTCTA  91 123
SAHC1340_RS05325 1052479 .. 1052510 +  -7.6   -5.7946   CATATGTTTAATAAG      TCTAGTTAATGTGTA ACG TA-ACATTAGCTAGA      TTTTTTTATTCAAAA 100 41
        clpB 1055283 .. 1055313 + -13.5  -5.22039   ATGAATAAAATTGAA       CCAAGAATGTGAT GATTA ATCGCATTCTTGG       TTTTTTAGATTTGAA 100 33
SAHC1340_RS05340 NONE
SAHC1340_RS05345 NONE
SAHC1340_RS05350 1059402 .. 1059415 +  -2.5  -2.56343   GACTAGGTACAGGTA               TTATT TATG AATAA                GTTAATACTTGGGAT  40 103
SAHC1340_RS05355 NONE
SAHC1340_RS05360 1061268 .. 1061281 +  -3.9  -4.34444   ACATACTTATAATTT               TTGAA ACTT TTCAA                TTTGTGTTATATTGA  61 268
SAHC1340_RS05365 1061835 .. 1061880 +  -8.5  -4.94992   GATTATAAAATAATT GCCTTGATACAAAGATTAC TCGTAAAT GACATCTTTGTATTAAGGC TTTTTCTAAATTTAA  95 90
SAHC1340_RS05375 NONE
        fabF 1064714 .. 1064744 +  -8.5  -5.25805   GCATAACTATAAAAA       TCTTCAGTAAC GTTGTTTTA GTTACTGAAGA       TTTTTTCAGTTTCTT 100 35
SAHC1340_RS05390 NONE
SAHC1340_RS05395 NONE
SAHC1340_RS05400 NONE
SAHC1340_RS05405 NONE
SAHC1340_RS05410 1071090 .. 1071111 + -10.9  -5.10767   ATGCTTTGTAAATTA           GGCTGGAGA CATA TCTCCAGTC            TTTTTGTGTTGGATA 100 42
SAHC1340_RS05415 1073009 .. 1073028 +   -10  -4.04174   AGCTTAGTAATGTAA            CCTCGACG ATTT TGTCGAGG             TTTACTTATATGGGG  91 34
SAHC1340_RS05425 1075009 .. 1075022 +  -2.5  -3.27298   AGATAAAGTAGGTGA               TTTAA ATGA TTAAA                TTAATACTTAAAAGA  43 13
SAHC1340_RS05430 NONE
SAHC1340_RS05435 1076879 .. 1076904 +  -7.6  -4.87008   CGTTAAATAATAAAA         GAGGCACTAG TTAATT CTAGTACCTC          TTTATTTTATCTCTT  88 35
        spxA 1078635 .. 1078658 + -12.6  -5.48054   TAAAAGATATGTCAA          GCAACACTAT TTCT ATAGTGTTGC           TTTTTTGGTTTTAAT 100 70
        mecA 1079711 .. 1079728 +  -9.9   -5.9003   AACGCACTATGAAAG             GAGACTC TTTG GAGTCTC              TTTTTTTATTGATTT 100 56
        pepF 1082813 .. 1082834 + -10.2  -5.86465   ATCCCCTTTGTTTAG           CGTCGTGT ATTCAG ACACGACG            TTTTTTTATGTTCTT 100 196
SAHC1340_RS05480 NONE
SAHC1340_RS05485 NONE
SAHC1340_RS05490 NONE
SAHC1340_RS05495 NONE
        mgtE NONE
SAHC1340_RS05505 1091468 .. 1091492 +  -2.9  -2.67171   TTCTGTAAAGGATGA          CGTTTCTAAAA ATA TTTTAACAACG          GTATTTAATCAACTA  42 378
        fabI 1093507 .. 1093540 +  -9.1  -5.50313   TAATATCATTCAACA     GCTTTGTTCACGTTAT TAT AT-ATGTGAGCAAAGC     TTTTTTGCTTTTATA 100 38
SAHC1340_RS05530 1096676 .. 1096694 +  -3.2  -4.05389   AAACAAGCACGTGCC             AAAAAGTA ATC TACTTTTG             TTTATAGTATATGTA  53 17
SAHC1340_RS05535 1097726 .. 1097736 +    -4  -3.86202   TTTTAATGTAACGGT                 TTTC AAA GAAA                 TTTGATATAATAGCA  54 167
SAHC1340_RS05540 1098332 .. 1098375 + -19.4  -4.67048   TGTTTGAATTAATAA GAAAATGGTCATTTTTATTG AATG TAATAAAAATGACCATTTTC TTTATTTTAAAATAC 100 70
SAHC1340_RS05555 NONE
SAHC1340_RS05560 NONE
SAHC1340_RS05565 1104696 .. 1104723 +  -8.5   -5.4182   TAAATTGCTTAGTGA        GACCTTTGCTA TTTATT TAGCATAGGTC         TTTTTGTTTGTACTT 100 258
SAHC1340_RS05570 1105581 .. 1105610 + -10.2  -5.04222   TAATTGATGTGAAGC       GGACAATCTTAA TTTAGT TTAAGGTTGTCC        TTTTTCATTTAATTG 100 38
SAHC1340_RS05575 NONE
SAHC1340_RS05580 1109494 .. 1109540 +  -9.9   -5.4387   TAGGATAATATAATA GCAATCTAAGTT-TAGTTAA TGTAGATT TTAACTGGAACTTAGATTGC TTTTTTAGTTTGTAT 100 33
SAHC1340_RS05585 1111183 .. 1111212 +  -8.7   -4.7416   CAACAAGTATAAAAA       CCTTTCTTAGAGA AGAT TATCTAGGAAAGG        TTTTTAGAATTTTAA  90 72
SAHC1340_RS05605 1112654 .. 1112691 + -10.9  -3.91197   AACGCAATCATAAAA   GGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCC   TTTAATCGTTTATGA  95 59
SAHC1340_RS05615 NONE
SAHC1340_RS05620 1114684 .. 1114716 +  -9.4  -5.26875   TTAATGCTTAAATAA     GCTTTTCTTAG-ACG TATG TGTTCTAAGAAAAGC      TTTTTTGCTTAAGAA 100 30
SAHC1340_RS05630 NONE
SAHC1340_RS16165 NONE
SAHC1340_RS05635 NONE
SAHC1340_RS05640 NONE
SAHC1340_RS05645 1118966 .. 1119020 + -12.5  -2.77148   TCCAAAAGATAAAAT TAAAAGCCAATCAATGGGAAATGTTG ACTT CAACACT-CCGTTTGATTGGCTTTTA TACTGTGTTACTAAG  93 43
SAHC1340_RS05655 NONE
SAHC1340_RS05660 1121389 .. 1121414 + -11.3  -4.60487   AGCTAAATGAAAAAA         TCCTAGGTATT CATG AGTACCTAGGA          TTTTTACGCATGATA 100 35
SAHC1340_RS05670 1123264 .. 1123302 +   -14  -5.00412   AAAGCAAAATAAAAA   TACAGCGCTACTCGTAAA TCA TATAAGAGTGGCGCTGTA   TTTTTAATTATGTTT 100 29
SAHC1340_RS05685 1124781 .. 1124792 +  -2.2  -4.32857   AATGGGTAAAGTTTT                GCGA CCAC TTGC                 TTTATCTTTGACACG  57 374
SAHC1340_RS05695 NONE
        menD NONE
        menH NONE
        menB 1130252 .. 1130286 +  -6.5  -5.86976   TGAATATGATATTAA    GTCACTTG-CGTCGTT TATT AGCGACGATAGGTGGC     TTTTTTATTTTATAA 100 48
SAHC1340_RS05740 NONE
SAHC1340_RS05745 1136707 .. 1136764 + -16.5   -3.4382   TTGTGTATGTATAAA AAAGGGATCAAAGGTCATCCCCCATGA TTGA TAGTGGGGGATGACTTTTGATCCTATG TTCATGTTGCTTATT 100 27
        fmtA 1144987 .. 1145004 +  -8.5   -2.7728   GGAAAATAAAAACCA             GCTAACA AAAG TGTTAGC              TGGTTAAACTTTACA  71 514
SAHC1340_RS05795 1149517 .. 1149555 + -12.1  -3.64599   AGTTAGAATAACAAA   TAAAATGGTAGCAAA ACATGTTCG TTTGCTACCATTTTA   TTTGCAGTATAGTGA  95 113
        purE NONE
        purK NONE
SAHC1340_RS05820 NONE
        purS NONE
        purQ NONE
        purL NONE
SAHC1340_RS05840 NONE
SAHC1340_RS05845 NONE
        purN NONE
        purH NONE
SAHC1340_RS05860 1163018 .. 1163055 + -12.3  -5.32944   AAAATACTAAGATTA   GCTATGAACGAATCTAT AACG ATAGATTTTTTCATAGC    TTTTTTAGTTGTAGA 100 49
SAHC1340_RS05890 1168268 .. 1168285 +  -4.2  -3.37344   ATGTGTACGCTATAA             GTTAGA TATATC TCTAAC              TTACTTAGATACAGG  50 80
SAHC1340_RS05895 NONE
SAHC1340_RS05900 1170420 .. 1170434 +  -7.2  -4.25104   AGGTGCTATAATAGT               TTTGCA ATT TGCAAA               TTTTACTGAAACCGG  75 39
SAHC1340_RS05905 NONE
        ptsP 1172578 .. 1172622 + -12.4  -5.43621   GACAGAATTATAAAT AAACCCGAAGTATTCATTGT AAGTA ATTATGAATACTTCGGGTTC TTTTTTATGATTTAT 100 56
SAHC1340_RS05920 NONE
SAHC1340_RS05925 1175623 .. 1175634 +  -4.4  -3.74626   CAACTTTCATTTACT                TGCA TTAC TGCA                 TTTAGATAATTTAGT  57 56
SAHC1340_RS05930 1176460 .. 1176479 +  -9.4   -3.6761   CTTACATTGTCTGTA            GAAATTGG GAAT CCAATTTC             TCTTTGTTGGGGCCC  84 98
SAHC1340_RS05960 1180684 .. 1180726 +  -3.7  -4.54306   AAATAATTAATATAA TACAGATGGTAGGAA ACAACTAATACAG TTCCTATTATCTGTA TCTTTTTTTATTAAA  62 35
        pdhA NONE
SAHC1340_RS05970 1182951 .. 1182965 +    -5  -2.86603   TAATACATTTTAAAA               GTTAAC GAA GTTAGC               GTATTTTAGTCTCAT  51 38
SAHC1340_RS05975 NONE
        lpdA 1185766 .. 1185785 +   -10  -5.80951   ATTCAGTCATTAAAA            GCTGTAGC ATAT GCTACGGC             TTTTTTGTTTTAGGT 100 60
SAHC1340_RS05985 1186240 .. 1186257 +  -5.7  -3.02263   CTAATAAAGCTATAT             TTTGATA CCTT TATCAAA              TGTTAAACAAAATGT  57 91
SAHC1340_RS05990 1186833 .. 1186848 +  -3.2  -3.51934   AACACGAATACTTAT              TGTAGC GACA GCTTCA               TATTTATAGGGGGGA  49 1
SAHC1340_RS05995 NONE
SAHC1340_RS06000 NONE
SAHC1340_RS06005 NONE
SAHC1340_RS06010 1190648 .. 1190664 +  -3.1   -2.5335   ATTAAAATAAAATCA              TAAATAG TAG TTATTTA              CTGTATATTTAGTTA  42 31
SAHC1340_RS06015 1191748 .. 1191788 + -17.9  -4.98522   TAAATATTGATGATA  CCCAGATTAGTAAGCAGAG GTC TTTTGCTTATTAATCTGGG  TTTTTATATGAGGTT 100 38
SAHC1340_RS06020 1192460 .. 1192510 +  -3.7  -5.29885   ATAGCAAAAGAAAAA CCATTAAAATGTTAAGTTGTTAATT ATT AGATA-CAACC-AACATTTTAATGG TTTTATTTTTAACTT  72 48
SAHC1340_RS06035 1195663 .. 1195702 +   -11  -4.47551   AAATAATTACCAAAA  GCGTAATATGTAGTCCTAA CAA TTAGG-TAACATATTACGC  TTTTATACCTTAAAT 100 35
        typA 1197963 .. 1197996 + -13.3  -4.17657   TTTAACATAATAAAA     GAGAAGCTGAGCGAT GAAA GTTGCTTAGCTTCTC      TTTTGGCATATAATA 100 41
SAHC1340_RS06060 1199244 .. 1199282 +  -7.5  -4.77719   TAATTACTGATTAAA   GTGGCTGTTATGTTGTC TTCTT GATGACATGTCAGTCAC   TTTTATTGGGTTTTA  83 115
        ftsW 1200802 .. 1200834 +  -5.7  -5.52079   GATGAGTTCAATAAC      GGAAGTTAGGC AACCAAACAAC GCTTAACTTCC      TTTTTGTTTTGATAT  86 133
SAHC1340_RS06070 1204717 .. 1204748 + -10.2  -4.68424   ATGATTAAAATAAAA      CGAGATTACACAAC AATT GACGTGTAATCTCG       TTTTTACATGGCTTA 100 42
SAHC1340_RS06080 NONE
SAHC1340_RS06085 1207658 .. 1207697 +  -5.9  -5.65177   TTGATGAAGAATAGT  CGGACAGTTGATGGTATT CATTT GATACC-TTAACTGTCCA  TTTTTTTATACATAT  90 95
SAHC1340_RS06095 NONE
SAHC1340_RS06100 1209448 .. 1209461 +  -2.4  -5.47159   GAAACCACTAACTAG               CATC TGACTC GATG                TTTTTATTTATTCGG  71 71
SAHC1340_RS06110 1211188 .. 1211199 +    -3  -2.95007   AAATAGATAATTTTA                TCAA TACG TTGA                 TGGTTATATTCAATC  44 329
        rsmD NONE
        coaD 1212382 .. 1212423 +  -7.5  -4.67942   AAGTAATAAAAATAA CAGTATTTTAGGTTTATCA TGGT TTACAATCCTAAAATACTG  TTTTCATTTGTTAAC  83 35
SAHC1340_RS06135 1214293 .. 1214303 +    -4  -4.13882   ATGTTGTTAATTAAA                 CTAA CAT TTAG                 TATTTTTCGTTTATA  58 61
        rpmF 1214533 .. 1214564 + -13.2   -5.1523   TACTCAATATAAAAA      GTCCCGCTTAAAAT GATT GTTTTAAGTGGGAC       TTTTTATATTGTGAA 100 48
SAHC1340_RS06175 NONE
SAHC1340_RS06180 NONE
SAHC1340_RS06185 1220205 .. 1220215 +    -4  -3.59979   ATTATGCAAGCATTA                 CAAA CAT TTTG                 TTTCCGATAAAAAAA  52 91
SAHC1340_RS06190 NONE
SAHC1340_RS06195 1221553 .. 1221588 +  -6.8  -3.33261   CACTATACAAAACAA    CCCTCCTCATCACAAT GGCA GTTGTGACGTGGAAGG     TTGTAAAGATTGAGA  65 72
SAHC1340_RS06205 NONE
SAHC1340_RS06210 NONE
SAHC1340_RS06215 NONE
SAHC1340_RS06225 NONE
SAHC1340_RS06230 1225244 .. 1225257 +  -3.9  -2.92265   ACTTATTGACTGGAT               TTTCA AAAT TGAAA                TCATTATCTGTAAAT  46 362
SAHC1340_RS06245 NONE
SAHC1340_RS16890 NONE
SAHC1340_RS06255 NONE
SAHC1340_RS06260 NONE
SAHC1340_RS06265 NONE
SAHC1340_RS06270 1228552 .. 1228572 +  -2.6  -2.53715   AAGAATTATCTGAGA            GAGCAAAA AGAGC TTTTGGTC            ATTAGTGCTCGTGAA  40 0
SAHC1340_RS06275 NONE
SAHC1340_RS06280 NONE
SAHC1340_RS06285 NONE
SAHC1340_RS06290 NONE
SAHC1340_RS06295 NONE
SAHC1340_RS06300 1230968 .. 1230982 +  -2.8  -2.76281   GAAAGTATGCCCGAC               TACCTG TAA CAGATA               AATTTTTATGTATGA  40 379
SAHC1340_RS06310 NONE
SAHC1340_RS06315 NONE
SAHC1340_RS06320 NONE
SAHC1340_RS06325 1232430 .. 1232452 +  -7.7   -4.0802   GCTATTAATCACTTA           CTACCTGCC TATAT GGTGGGTAG           TTTAATTCTTGCAAT  77 212
SAHC1340_RS06330 NONE
SAHC1340_RS06335 1234730 .. 1234742 +  -6.3  -3.13073   AATTTGCGGATATGG                TGCTA GGT TAGCA                TATATTGATACGAAT  60 451
SAHC1340_RS06345 NONE
SAHC1340_RS06350 NONE
SAHC1340_RS06355 NONE
SAHC1340_RS16895 1238403 .. 1238420 +  -2.7  -3.89501   ACGTCTGATAAGAGC             GAGTGAT AAAA ATGACTC              TTTATGAAGATGTTA  51 20
SAHC1340_RS06360 NONE
SAHC1340_RS06365 NONE
SAHC1340_RS06370 NONE
SAHC1340_RS06375 NONE
SAHC1340_RS06380 1240519 .. 1240538 +  -5.6  -5.60993   GTAAACTAATAGATC            AAGGGGGC GTAA GCTCCCTA             TTTTTTTATAAAAAA  90 37
SAHC1340_RS06385 NONE
SAHC1340_RS06390 NONE
SAHC1340_RS06395 NONE
SAHC1340_RS06400 NONE
SAHC1340_RS06405 NONE
SAHC1340_RS06410 NONE
SAHC1340_RS06415 NONE
SAHC1340_RS06420 NONE
SAHC1340_RS06425 1251421 .. 1251455 +  -3.6  -2.71924   TCCAGAGGCAAAAGA     TGAAAAGTCACAGGTG TAA TGCTTGAGGCTTTTTA     ATTTAACACAAAGTA  44 7
SAHC1340_RS06430 1251866 .. 1251885 +   -10  -5.54338   AAATAACAGTTAAGA            GTCAGTGC TTCG GCACTGGC             TTTTTATTTTGATTG 100 112
SAHC1340_RS06435 NONE
SAHC1340_RS06440 NONE
SAHC1340_RS06445 1255449 .. 1255465 +  -9.5  -5.80951   TCGAATAATTTTAAA              CGACTAA TTT TTAGTCG              TTTTTTATTTTGGGT 100 33
SAHC1340_RS06450 NONE
SAHC1340_RS06455 1257488 .. 1257513 +  -8.3   -5.5208   TTTAAATGTAGATAA         CAGGCAGGTAC TACG GTACTTGCCTA          TTTTTTATGTTATAA  95 154
        isdC NONE
        isdD NONE
        isdE NONE
        isdF NONE
        srtB NONE
        isdG 1266267 .. 1266278 +    -3   -3.4691   AAGAGGTTGCAGTAC                TTGT TATG ACAA                 TTGGTATTGTTAGCT  47 50
SAHC1340_RS06500 1266577 .. 1266591 +  -4.4  -5.61881   CAAATGTTTTCATCT               TATTAA TGA TTAATA               TTTTTATTTTTAAAA  82 216
SAHC1340_RS06505 1267643 .. 1267678 + -10.7  -5.63103   TGGTACCACGGAAAT    GACTTTCGTCC-CTTA TTTTT TAAGAGGATGAAAGTC    TTTTTTTAGTTAAAC 100 302
        pheS NONE
SAHC1340_RS06515 1271217 .. 1271264 +    -8  -5.29885   AGATAATGATTTAAA CCCCATGTATAAGGATATC TGAAGTAGATT GATATCCCTA-ACATGGGG TTTTATTTTTGGGTT  93 35
        zapA NONE
SAHC1340_RS06530 NONE
        polX NONE
SAHC1340_RS06540 1277727 .. 1277737 +  -5.4  -3.58766   GAGCAAATAGAAATA                 CATG AAG CATG                 TTATCTGATATAATT  59 135
        trxA 1278122 .. 1278151 +  -8.6  -5.48623   TACAACCAATGACGA       CTGGGGCATTTC TTTAAT GAATTGCTCCAG        TTTTTGTTTGTGTTT 100 43
        uvrC 1280272 .. 1280282 +    -4  -5.50499   ATGTTACAATATGGT                 TAAC AAA GTTA                 TTTTTTTGAATGTAC  76 88
SAHC1340_RS06560 1281127 .. 1281137 +  -5.4   -3.0517   TATATTGGTGTTACT                 GCAA TTA TTGC                 CTTTATGTAATACAT  54 5
        sdhA NONE
        sdhB 1283905 .. 1283915 +  -2.6  -3.27475   ATGATAGTGGGCTGA                 TTTA AAA TAAA                 TATTATAATGACAAA  43 150
        racE NONE
SAHC1340_RS06580 NONE
SAHC1340_RS06585 1285895 .. 1285928 +  -4.8  -5.75822   ATCACGAAACAATCA     GTCATA-CTACTTTT TAAAT AGAAGTAGCTATGGC     TTTTTTTAGTTTATA  87 9
SAHC1340_RS06590 1286233 .. 1286244 +    -3  -2.74563   AAGTCATAAATTATA                TCAA TAAT TTGA                 TGGTTAAAATATGGA  42 52
         ecb 1286739 .. 1286758 +  -6.4  -4.84527   AAATAATTGATAGAA            GCCATGCT ATAG AGTGTGGC             TTTTTGCTATATCCA  80 35
SAHC1340_RS06610 1288700 .. 1288722 +  -4.9  -5.60689   GAGATTATACCTTCA           GACACCA ACATTCAAA TGGTGTC           TTTTTTGTTGTGTGG  83 48
         efb 1289552 .. 1289564 +    -2  -2.74605   CTGAAATTGACTATA                TACT CAGTA AGTA                TCAATTTTAAGGAGA  39 144
         scb 1289947 .. 1289976 + -10.1  -4.36595   AGATAATAAATAAAA       CAGGTTGAGACAA AAAA TGGTCTTAACCTG        TTTTCAATTTGCATA  91 35
SAHC1340_RS06655 NONE
SAHC1340_RS06660 1294285 .. 1294327 +  -7.9  -2.65751   ATCATTAAATGAAGG AATAGAGCCTAAGACAT AATAAATCA ATGTCTTAGGCTCTACA ATATTATATTGGTAG  65 75
        argF NONE
        arcC 1299557 .. 1299601 +    -6   -4.4388   ATTTTTATTATTTAT GTGCACCCC-C-TGAAAATA ATGCCTC TATTTTGATGCGGGGTGCAC TTTCTTAATTTATAT  70 83
SAHC1340_RS06690 1301268 .. 1301311 +  -4.1  -4.35353   ACTAATGGGGTTTTA TGCATCTCG-TAGGTTT-GTA GAAA TACTAAACTAAGCGAGGTGCA TTATTATTTTTGATT  61 66
SAHC1340_RS06695 1301994 .. 1302034 + -12.2  -3.14294   AAAGAGGCATTGATA TACACTAAAAAGAGGCAAG ATTA CCTGCCTCTTTTTAGT-TA  TTAAATATACGTGTT  95 257
SAHC1340_RS06705 1303482 .. 1303507 +  -8.3  -5.83822   AGTTAAATAATTAAA         AAACCACGTCT CGAT GGACGTGGTTA          TTTTTTTTAGATGTA 100 56
SAHC1340_RS06715 NONE
SAHC1340_RS06720 1304708 .. 1304758 +  -3.8  -3.56594   ATAACTAATATTCTT TAAAATAAACTGGGTGAGCATA CTTTAATGT TATGC--ACTCAGTTTATTTTA TTTGCAGAAATTTGA  52 45
SAHC1340_RS06725 1305711 .. 1305731 +  -5.5  -3.07029   CCTTAGAATCATTTC            TGCCAAT GGCTTTA ATTGGCA            TATTGAAACTCTTTG  54 229
        bshC 1307879 .. 1307909 + -12.7  -6.28401   ATATACCAAGGGTTT       AGCCCGATTTATC TTAAT GATAAATCGGGCA       TTTTTTTGTTTTTTA 100 40
        mraZ 1308451 .. 1308462 +    -3   -2.6381   TTAAAATGGAGGAAT                TGAA GTGT TTCA                 TCATATCAGCGTTAT  42 37
        rsmH NONE
        ftsL NONE
SAHC1340_RS06755 1312165 .. 1312181 +  -3.7  -4.95758   AGGTCAGATTAACTT              GTTTGTT ATA GGCAAAC              TTTTTATACTGTCCT  67 170
SAHC1340_RS06760 1313271 .. 1313282 +  -4.4  -3.44325   TTTATGGATTGGAGT                GCAT TAAG ATGC                 TTAATTATACAGGGT  53 19
SAHC1340_RS06765 NONE
SAHC1340_RS06770 NONE
        ftsA NONE
        ftsZ 1318723 .. 1318745 + -12.2   -5.5943   ATAATTCAACACAAA           TCATCAGATA ACA TATCTGATGA           TTTTTTTACTAATTT 100 62
        pgeF NONE
SAHC1340_RS06790 NONE
SAHC1340_RS06795 NONE
SAHC1340_RS06800 1321306 .. 1321336 +  -8.3  -4.87037   AATTAAGCGACATAA       CGAGGCAAGGGTA CATGA TACTTTAGCCTCG       TTTTTGATATGTATT  91 40
SAHC1340_RS06805 1322167 .. 1322185 +  -2.5  -2.72144   ACATTACCTATAGAA             CATTATT CAAAT AGTAATG             ATTTAAGGAGGATAA  40 12
SAHC1340_RS06810 1322923 .. 1322935 +  -3.5  -2.66316   TTATATCACTGGCTT                TTTAA TAT TTAAA                TAATGTAATGAGAGA  44 127
        ileS 1325989 .. 1326000 +  -4.4  -2.73212   TACAAATTCTCTGAG                GCAT ATAA ATGC                 GTTATAGTTGCTATT  48 219
SAHC1340_RS06820 1326987 .. 1327020 + -14.9  -5.25893   TAGGCAATGTAAAAA     GCTGATTTCTATTAA TTAT TTGATAGAAATCAGC      TTTTTTGATATGTAT 100 130
        lspA NONE
SAHC1340_RS06835 1329454 .. 1329480 +  -8.1  -5.72622   ATTGTATATACTAAA         CCTCATGTC GATATTAAA GACATGAGG         TTTTTTGTTTCTAAA 100 365
        pyrR 1330202 .. 1330229 + -10.1  -5.88565   TTGTCACACTTTTTG        TCTCTTTACAT ATACTG ATGTAAAGAGA         TTTTTTTATTATCGG 100 186
SAHC1340_RS06845 NONE
SAHC1340_RS06850 NONE
SAHC1340_RS06855 NONE
        carA NONE
        carB 1338055 .. 1338103 +  -4.1   -4.2693   ATCAAACTGTATCGG TGGGGCTGTAAT-TAACCATTT ACTTAA AGAAGTTTATATTACAGCCTCA TTATTTTAATGAATT  61 45
        pyrF NONE
SAHC1340_RS06875 NONE
SAHC1340_RS06880 1339956 .. 1339966 +    -4  -4.88228   TATCATTTATTAACA                 TATG TAT CATA                 TTTTTAATCTTGCGT  68 291
SAHC1340_RS06885 1340727 .. 1340774 + -15.3  -3.86822   GCATTAAATAATAAA TAAACACCTCACCATAAGAAAG GACTA CTTTCTTTTG-TGAGGTGTTTA TTTGTCGACAACTTG 100 224
         gmk NONE
SAHC1340_RS06900 1343671 .. 1343688 +  -7.7  -5.75822   CATATCCAAATCAAA             CGCACCT ATGT AGGTGTG              TTTTTTTAGTTTATC 100 92
       coaBC NONE
        priA 1347510 .. 1347559 +    -9  -5.01546   TAAGTACAGAAAAAG GGCAGAATATACAACTGTTAACT ATTTA AATTAGCAGTT-TATATTCTGTC TTTTTATATGGCTTT  95 108
SAHC1340_RS06915 NONE
SAHC1340_RS06925 NONE
SAHC1340_RS06930 NONE
        rsmB NONE
        rlmN NONE
SAHC1340_RS06945 NONE
        pknB 1356128 .. 1356157 + -10.1  -5.09762   TAATTGAAGTAAATG       TACCGAGGTTTCT ATTT GGAAGTCTCGGTA        TTTTTATGTTGAGAT 100 44
        rsgA NONE
SAHC1340_RS06960 NONE
SAHC1340_RS06965 1358806 .. 1358831 + -10.6  -3.09491   TTGGTAACAAAAAAA         GAACTAAGAG GTTGAG CTCTTAGTTC          TTAAGTAAATGTGTC  84 326
SAHC1340_RS06975 NONE
SAHC1340_RS06980 1361570 .. 1361597 +  -6.5  -5.83211   ATTTAAAATAAAAAA        CTACCAA-TGAT AAATC ATCAGTTGGTAG        TTTTTTATTTTGCTA 100 43
        recG 1363795 .. 1363822 +  -2.8  -3.64822   TATTACATCGTAGTT        TTGACTAATT-GC CAT GCTGATTTGTCAA        TTTGAGTGCAACACT  47 18
        fapR NONE
        plsX NONE
        fabD NONE
        fabG 1367246 .. 1367287 +  -8.2  -3.53343   CTCATTGACGCAGTG GTTGACT-GGTCATCCAAT GGAGA ATTGTCTGACCTAGTCAAC TTTGCGGGGGAAATT  74 57
SAHC1340_RS07015 1367703 .. 1367728 +  -9.7  -6.01187   TAATAAATCTTACAT         CTGGGTCGTCA GTAT TGTCGACTCAG          TTTTTTTCTTTAATT 100 38
SAHC1340_RS07020 1368531 .. 1368544 +  -2.5  -2.78935   GCAATTAAAACAAAT               TAAAT AGAA ATTTA                TATGATACGACATAT  41 19
         smc NONE
        ftsY NONE
SAHC1340_RS07035 NONE
         ffh 1375250 .. 1375298 +  -9.2  -4.65895   TTTGTTGCAATGAGA TGTGCATCCCG-AAAGTTATACT AAAG AATATAACTTTATGGGGTGCATA TTTTTAGATACACAA  93 63
        rpsP 1376027 .. 1376045 +   -11  -5.33026   AATATAGAACGTATT             GGGTACCA TAA TGGTGCCC             TTTTTCTTTGAATTA 100 130
        rimM NONE
        trmD 1377345 .. 1377363 +  -2.4  -2.65815   ATAGGATTGAAAAAA             GGTTAGTA TTG TGCTAACA             TAATCTGAGTGTGGA  40 20
        rplS 1377855 .. 1377891 + -11.7  -5.66989   GACTCAAACAATAAA    GCCATCTAGGTCACTTT TAT GGAGTGATATAGATGGC    TTTTTTTGCTGTTTA 100 77
        ylqF NONE
SAHC1340_RS07080 1382704 .. 1382729 +    -2  -2.75963   AATCGTAAAATTCAA         TTAAATGATA AAAAAG TAGCATTTAA          GTTTACAATAGCGCT  39 40
        sucC 1383979 .. 1383992 +  -2.4   -3.5511   AGGAAAGGATGGGAG               CACT AAGATG AGTG                TATTTATAGATAAGA  47 40
        sucD 1384920 .. 1384960 +   -13   -3.9712   TGATATAAATGGCTA TAGCCCA-TTCC-ATACTTT ATA AAAGTATCGGAAATGGGCTA TTTGTCGTGCGATGA 100 51
SAHC1340_RS07095 NONE
        fmhC 1387519 .. 1387558 +  -3.9   -4.4874   AGGTTTAATTATAAA GTATGTTGGAAATTGAAAT TTTA AATTC--TTTCCAACATAC  TTTTCACTTTTTAAG  63 33
        dprA 1388611 .. 1388621 +  -2.6  -2.87931   CCTTTGTAATTTATT                 TTTT AAT AAAA                 TCTATAAAAAATAGA  41 80
        topA NONE
       trmFO 1392508 .. 1392518 +  -3.2  -3.16323   CAATGAAATAATAAA                 TGGC AAG GCTA                 TTAATAAAGACTTTT  46 265
        xerC NONE
        hslV NONE
        hslU NONE
        codY 1396392 .. 1396433 +  -2.2  -3.41292   AAAAAAGTAAATAAG TCGATGAGTCTGGGACAT AATTCA ATGTCCTAGTCGTGACGA  TGTTATCTTGGCGGT  44 27
SAHC1340_RS07140 1396665 .. 1396680 +  -4.8  -3.40134   ATTGTGTAAAGGGTG              CAATAT TTAT ATATTG               TCTTTACAATAGTTT  55 157
        rpsB NONE
SAHC1340_RS07150 NONE
SAHC1340_RS07155 1398638 .. 1398649 +  -4.4  -4.13903   TCATTCTAATAAAAC                GACA ACTG TGTC                 TTCTTTACTTGTATA  61 101
SAHC1340_RS07160 1399438 .. 1399452 +  -2.9  -3.15663   TTTAGAGGTGTAAAA               TAATG AGTGA CATTA               TTAATGAAACTAAAT  46 42
         frr 1400234 .. 1400259 +  -7.7  -6.01187   CATTTCTGGTGTAAA         CTGTACC-GAGT CAG ACTTTGGTACAG         TTTTTTTATTTGCTT 100 265
SAHC1340_RS07170 NONE
SAHC1340_RS07175 1401956 .. 1401992 +  -6.1   -4.1585   CAATAAACGTAAAGA   GGAGTTGCTGAGAT AATTTAATGA ATCTCAG-AACTCC    TTTTGAAAATTATAC  70 55
        rseP NONE
SAHC1340_RS07185 1405312 .. 1405322 +  -2.6  -3.36117   ATGATTAGCCAAATA                 TAAA GCA TTTA                 ATTTTCTATCATTAC  45 190
SAHC1340_RS07190 1409963 .. 1409981 +   -11  -4.78848   TGAACTCAGGCAGAA             GAGTGGGA GAT TCCCGCTC             TTTTCTATTTGCCAA 100 267
        rimP NONE
        nusA NONE
SAHC1340_RS07205 NONE
SAHC1340_RS07210 NONE
        infB 1414454 .. 1414506 + -11.8  -3.80862   TATAGTTAAGATTGA TATGCTCCCTATAAA-TATTGCACTT TTT AAGTGTC-TACTTTATAGGGAGCATA TTTGATACTAGCTTT  95 64
        rbfA NONE
        truB NONE
        ribF NONE
        rpsO 1417624 .. 1417657 + -11.9   -4.1891   CTTAATATAACGTCT     TTGAGGTTGGGGCAT ATTT ATGTTCCAACCTTAA      TTTATATTAAAAAAG 100 42
         pnp 1420083 .. 1420111 +  -9.7  -5.61596   GAATAATATTTAAAG        TCATATGACGACA ATG TATCGTCATGTGA        TTTTTTTATGCCACT 100 35
SAHC1340_RS07245 1422036 .. 1422048 +  -6.3  -4.13911   ACTGAAATATAATGG                TTGTC ATG GACAA                TTTACTTATATTTTA  70 79
SAHC1340_RS07250 NONE
SAHC1340_RS07255 NONE
SAHC1340_RS07260 NONE
SAHC1340_RS07265 NONE
SAHC1340_RS07270 NONE
SAHC1340_RS07275 NONE
SAHC1340_RS07280 NONE
        pgsA 1430580 .. 1430607 +  -7.9  -5.52384   AAATATTTGTTTATA        CTAGATTTCAT TTTCAT ATGGAATCTAG         TTTTTTTAATCCCAA  95 39
SAHC1340_RS07290 NONE
        recA 1433190 .. 1433200 +  -5.4  -3.35073   TAAACTTAGCAAATA                 TCCT TAT AGGA                 TTGATTGAAAGTGAT  57 63
         rny 1435072 .. 1435097 +    -9   -5.1925   GCGAAATAATTTTTG         TCTCCCTCAC AAATTA GTGAGGGAGC          TTTTTTAAGTTGTAG 100 32
SAHC1340_RS07310 1436608 .. 1436639 +  -7.4  -5.25772   TATGAATTTAATATA      GTACCACTG-TTTAC ATA GTAAATCGGTGGTTC      TTTTTGTTATCATTT  91 85
SAHC1340_RS07315 NONE
SAHC1340_RS07320 1439325 .. 1439371 +  -9.7  -5.27779   ATTTAATAATTAAAA CTGAGTCGTATAAATGTATTT ATAAC AGATCCATTTATGCTACTCAG TTTTTTACTATTACA 100 35
SAHC1340_RS07325 1439789 .. 1439799 +  -2.6  -3.09516   CTTTATAGTTAAATT                 TAAT ATA ATTA                 TTAAATGATACGGGC  42 112
        miaB NONE
SAHC1340_RS07335 NONE
        thiW 1442254 .. 1442264 +  -2.6  -4.53163   GTATTCTTCAAAGGT                 TTAT AAA ATAA                 TTTTATGATATATGA  58 15
        mutS NONE
        mutL NONE
SAHC1340_RS07355 1447878 .. 1447917 +  -8.9  -4.24342   AAATAAAATAATTAG  CACCTCTAAAACGATTAA AATCA TTAAA-GTTTTAGAGGTG  TTTATTAGTAAAAAA  86 148
SAHC1340_RS07360 NONE
        glpK 1450733 .. 1450791 +  -9.9  -4.95854   ATTTGAATCGAGAAG CGAGAGATTTGTTCGAACATGTACAATT GAAG GATTGTTTATGTG-GGACAAGTCTCTCG TTTTTACATTTTTTA 100 95
SAHC1340_RS07370 1452515 .. 1452540 +  -7.6  -5.60993   TTGTACAATCATAAA         CTGGTGTCCT GTTTTA AGGGCATCAG          TTTTTTTATACGAGA 100 46
SAHC1340_RS07375 NONE
        miaA NONE
         hfq 1454905 .. 1454954 + -15.4  -4.97158   TGTTTGTAATAAAAA CGCTTCATATAAAGGTCGAGTCA ATATA TGATACGAC-TTTATATGAAGCG TTTTATTTGCTATGA 100 171
        hflX NONE
SAHC1340_RS07400 1458074 .. 1458107 +  -5.4  -5.01732   ATATAATAGATTAAA     TTTCACCCTAAATG ATAATG TGTTTTGGGTGAAA      TTTTTTGCGGAGATT  77 35
SAHC1340_RS07405 1458664 .. 1458676 +  -3.5  -2.76009   GGTGATTTATCCCGA                TTTAT TAA ATAAA                ATTTGGAGGATTTTA  44 14
        glnA 1460070 .. 1460094 + -11.5  -5.37593   AATCAGTAATATCAA          GGGCTAGAGCA TTT TGCTTTAGCTC          TTTTTTGATTTGGAA 100 61
SAHC1340_RS07415 1460926 .. 1460940 +  -5.8  -2.91383   GGAGTTCTTTCTTTT               TATACA AGA TGTATA               TGTATAAATGGAAAT  56 227
SAHC1340_RS07420 1461740 .. 1461750 +  -2.6  -2.85999   AATATAAATAAAAAA                 TTAT CAA ATAA                 TATAATATAGAATAG  41 128
SAHC1340_RS07425 1462138 .. 1462150 +  -4.9  -3.19192   AAAACAGAATGTTAA                CAAAA ATA TTTTG                TTAGGTTAGGTGGAC  53 26
SAHC1340_RS07430 1463112 .. 1463136 +  -4.4  -4.37092   AGAAGTGGCTGTAAA          CTTCAATG AATACTAAA CATTGAAG          TTTTGTAAAAGGCGT  64 189
SAHC1340_RS07435 1463794 .. 1463842 + -10.4  -4.46267   TGGATCGTCTTGAAA TGCTCCCTTCAAAGTTTTCATT TTTTC AATGTCGACTTCGAAGGGGGCA TTTTCATTAAATTGT  93 258
SAHC1340_RS07440 NONE
SAHC1340_RS07450 NONE
SAHC1340_RS07460 NONE
SAHC1340_RS07465 1466911 .. 1466932 + -10.3  -5.55769   TTACTTTAAAAATTT           TAACCTTCA AATG TGAAGGTTA            TTTTTTATTGTCCAA 100 48
SAHC1340_RS07470 1467179 .. 1467194 +  -5.4  -4.13282   TATGTTACATAACCA              TCCTGG ACAG TCAGGA               TTTTCAGAATATGAT  65 159
SAHC1340_RS07485 1467998 .. 1468011 +  -5.3  -2.79183   AAAATAGATATATGT               TAGGT CATC ACCTA                TATAATGAAAATAAA  53 458
SAHC1340_RS07500 NONE
SAHC1340_RS07505 NONE
SAHC1340_RS07510 1469208 .. 1469222 +  -2.9  -3.62096   TCCTAAGCTCAATTT               TAAAC ACAAA GTTTA               TTTGAAATGATGCAC  49 155
SAHC1340_RS07520 1471128 .. 1471158 +  -9.9  -3.85698   TAAATAATATGACGT       GAAAGGTGCAAAA TGTTT TTTTGTGCCTTTC       TTTATAGGAGAAAAG  89 34
         cls 1472671 .. 1472691 +  -6.1  -5.45802   TAATTTATTTGTAAG            GAGTCTCGA TTA TAGAGGCTC            TTTTTATTTTGCCCA  89 38
SAHC1340_RS07530 NONE
SAHC1340_RS07535 NONE
SAHC1340_RS07540 1476152 .. 1476162 +    -4   -2.9594   ATAATAACGTACTTA                 TTGT ATA ACAA                 CTATTTTGTTGCAAT  48 265
SAHC1340_RS07550 1477757 .. 1477767 +    -4   -4.6951   GACTGTATTTTCATT                 TGAA ATG TTCA                 TTTATTTTCACTCCT  67 315
SAHC1340_RS07560 1478525 .. 1478580 +  -9.4  -4.44548   ATATATAGAAATAAT TTAAAGGCATAATAA-CCATAGTGC GTATCGA GCGTAATGGATTATTATGCCTTTGA TTTTACTTGAATATA  90 110
SAHC1340_RS07570 1480350 .. 1480389 +  -8.1  -4.77629   AATAATTAAGAAAAA  GCAATTCATAACGCA-GT TGAAT ACATGTGTTACGAATTGC  TTTTATATTAGTTTT  87 32
SAHC1340_RS07580 NONE
SAHC1340_RS07585 NONE
SAHC1340_RS07590 NONE
SAHC1340_RS07595 1486107 .. 1486150 +  -9.9  -5.69262   TAAATTTTAAAATAA GCCTTAA-CACATGATATTT GAATA AGATATCTTGTGGTTAAGGC TTTTTATTTTTGTGA 100 38
SAHC1340_RS07615 1490103 .. 1490115 +  -2.7  -3.13164   AAAATAAATTTGATA                TGTAG TTT CTATA                TTGCGTAGTTGAGCA  42 34
        rpmG 1490370 .. 1490400 +  -8.2  -5.28826   CGATTTGAAAATAAA       GCGGGCTTACCTAT TAT ATTGGGGAGCTCGC       TTTTTTATGAAATTT  93 61
        rpsN 1491129 .. 1491164 +  -9.2  -5.01042   TACGAATGCTATAAA    CTGAATGTTTTCTCAT ATTA ATAAGGAAACATTCGG     TTTTTAATTTGCATT  95 97
        guaC NONE
SAHC1340_RS07640 1493374 .. 1493403 + -15.1  -4.65153   AAAAAATAATAATGG       CTCGCTCCTGTAA ATTA TTACGGGGGCGAG        TTTTAATTTGTGTAA 100 170
SAHC1340_RS07650 1494622 .. 1494651 +  -5.1  -5.61689   GATACATTGTCACAA       CGTTATTTTGC CTATTTTT GCGAAATAGCG        TTTTTTATTACTTTT  83 39
SAHC1340_RS07655 1495024 .. 1495042 +  -3.2  -5.46706   GACATTATAACTTGA             AATAAGTA TTT TACTTATC             TTTTTATTTTAAAAT  73 66
         tkt 1497120 .. 1497148 +    -9   -4.1964   AAGCGAGTATGTTTA        GAAGTCTAGGAT GCATA ATCTTAGGCTTC        TTTTAAAGTGTTGAA  86 53
SAHC1340_RS07665 NONE
SAHC1340_RS07670 NONE
SAHC1340_RS07675 1498265 .. 1498313 +  -3.4   -4.4078   ATCAATTAATTACTT TTAAAACCACTTG-TGATCGACT TCTA AATCAGTCAATGAGTGGTTTTAA TTTTACTTGAAAAGG  59 32
SAHC1340_RS07680 NONE
SAHC1340_RS07685 1502593 .. 1502606 +  -2.5  -4.72201   ACCTTAGCCCATCTC               TTTTT ATTT AAAAA                TTATTTTTTCTCACG  60 82
SAHC1340_RS07695 1504846 .. 1504889 + -12.8  -4.96501   TAAGTATTTTAATAA CAAGTAGTATGTC-ATTCTAG TAG CTAGAACAGATATACTACTTG TTTGTTTTTGTGGAA 100 52
        acnA 1508509 .. 1508519 +  -5.4  -4.34263   ATGATATAATAGGTC                 GGTT CAA AACC                 TTTGTGTTCTTGGCC  67 118
SAHC1340_RS07705 1509536 .. 1509553 +  -4.2  -2.90029   CATTTTTAAACCAAG             TTACTG CTGCAT CAGTAA              GTTCTATTTGCATAA  48 498
        parE NONE
        parC 1515245 .. 1515263 +  -6.8  -2.90615   TGCTGACCAAGTACT             TATCGTTA AAT TAGCGATA             TACTTTGACCAAACT  61 121
SAHC1340_RS07735 1516902 .. 1516937 +  -9.9  -4.40173   TAAAAATCAAATAAA    CCCTGAGGTTTTC AAATTAAAGC GAAAATCTCAGGG     TTTTAAATTTGTACT  91 68
SAHC1340_RS07740 NONE
SAHC1340_RS07745 NONE
SAHC1340_RS07750 1519889 .. 1519903 +  -5.8  -4.09805   TTGTTCTGTTTGAGA               TAGAAA TAT TTTCTA               TTTACTTCTTAATAC  68 361
        mprF 1522641 .. 1522679 + -10.5  -3.81853   ATGATTTATAAAAAA   CGGTACAGATAAGAA TATTTAAGT TTCCTATCTGTACCG   TATTTTAATATTGAA  90 110
SAHC1340_RS07765 1524392 .. 1524438 +   -14  -4.09739   GATGAAGATTAAAAA TAAACAAGGCGATTTCTATC ATACTCA GATAGAAGTCGCCTTGTTCG TTTTCAAAGAATTAA 100 29
SAHC1340_RS07775 1526268 .. 1526278 +    -4  -3.23708   TTCTCGGTCAGTAGG                 GTTT TTG AAAC                 TAATTTTTAAAGCAC  49 222
SAHC1340_RS07785 1528928 .. 1528964 + -13.2  -5.00616   TTTAGGTGGTACCAC   GCGTCAGCGTCCTTTAT ATTG AT-AAGGATGCTGGCGC    TTTTTTGAAAGGAGC 100 458
SAHC1340_RS07790 NONE
SAHC1340_RS07795 NONE
        trpD NONE
        trpC NONE
SAHC1340_RS07810 NONE
        trpB NONE
SAHC1340_RS07820 1535392 .. 1535423 +  -3.9  -5.48303   AGAAATGATACAAAA      GTAATATGAGC AAACCCAAAC GTTCATATTAC       TTTTTTTGAAATTGT  76 113
        femA NONE
        femB 1538182 .. 1538210 +  -6.1  -5.53079   ATGTAAATGATGTTA        GGGCTTATAGT TATTGAT ACTATAGGCTC        TTTTTTATATGTTTT  89 41
SAHC1340_RS07835 1539622 .. 1539658 + -13.9  -2.83772   ATATAAATAAAAACA    CCCCTATCAAATGATAA TCA TTATCAATCGATAGGGG    CTATTTTAATAAAAT 100 31
        pepF 1546225 .. 1546260 + -12.8   -5.4477   GTAGAACAATATAAA    CCAAGATTTTCACATT ACTA ATTGTGAGAATCTTGG     TTTTTTTGAGGGTTT 100 59
SAHC1340_RS07915 1554807 .. 1554845 +   -14  -5.38054   TAATAGACATTAACT   GGGCGTCTCGATGCTA ATATTTA TAGCATCGAGGTGTCC   TTTTTATTTGTAAAA 100 313
        tnpA 1555564 .. 1555594 +  -9.1  -5.42198   GCTTATAGCCGCAGA      AC-AAACCACCCGT TCAC ACGGGTGGTTTTGA       TTTTATTTTTTAACA 100 116
SAHC1340_RS07925 1557350 .. 1557364 +  -3.6  -2.88118   ATGATTGTTAAAATA               TTCTAA AAA TTGGAA               ATTATTATAAAATGG  45 48
SAHC1340_RS07930 NONE
SAHC1340_RS07935 NONE
SAHC1340_RS07940 NONE
        dapD 1560760 .. 1560785 +  -8.4   -4.1023   GTATAATAATTTCAA         GGTTGAGATA CGATTA TGTCTCAACC          TTATTGTTTAGCATT  81 51
SAHC1340_RS07950 NONE
SAHC1340_RS07955 NONE
        lysA 1564389 .. 1564425 +  -9.4  -3.54906   AAATAAACAAAGTAA    TCCCCGAAGCACAGAA AATTA TACTGTGACTCGGGGA    ATTTTTATGCATTAT  84 41
SAHC1340_RS07985 NONE
SAHC1340_RS07990 NONE
SAHC1340_RS07995 1568211 .. 1568244 +  -9.8  -5.25893   AGGCAATGTAAAAAA     GCTGATTTCTATTA TTTATT TGATAGGAATCAGC      TTTTTTGATATGTAT 100 98
SAHC1340_RS08160 1598224 .. 1598251 +  -7.8  -5.18357   AGCGAGTATTTTAAA        CACGTGTTACTT ATTT AAGTGATGCGTG         TTTTTTAATGGATTA  89 457
SAHC1340_RS08175 1598735 .. 1598773 + -13.2  -3.51934   AAAAAGAATAAATAA   AAGGAGCACCGACTGATG TGA TGTCAATCGGTGCTCCTC   TATTTATCAAAGAAA 100 26
SAHC1340_RS08215 1642143 .. 1642180 +  -7.1  -5.22039   GGGTTCTATAATAAA   TCGTACTGATGGAAAGT TTTT ACTTTTTATCTGTCCGA    TTTTTTGAATTTGAA  91 106
        recU NONE
SAHC1340_RS08265 1649108 .. 1649143 +   -12  -5.57054   CCACTCAACATAAAA    TCCTCAGTTATACCAT ATTT ATGGTGTAGCCGAGGA     TTTTTTTAGGTTCTT 100 42
SAHC1340_RS08420 1677723 .. 1677741 +  -6.1  -3.08015   CCCCCGTGGAATTTA             CCATTTT CAATA AAAATGG             TATTCGCATCGTTCC  57 207
SAHC1340_RS08450 1683431 .. 1683445 +  -4.4  -4.17316   TGTATATTATTTTGC               TTTAAT TTG ATTAAA               TTCTTTTCAAGAAAT  61 121
SAHC1340_RS08635 1715937 .. 1715965 +    -9  -2.78596   CTTTTTACACTCCCG        TGTTGCATCACT CAAAA AATGATGCAACA        TCTGATACAACACTC  74 58
SAHC1340_RS08755 1728280 .. 1728296 +  -3.7  -3.73872   GAGACAAGATTTTTT              GTAGCTA TCT TAGTTGC              TTCTTGAATGTTCAT  55 208
SAHC1340_RS08765 1728655 .. 1728675 +  -6.3  -5.63517   TGTTTGCATGTTTTA            GTAAATTGA GTT TTAATTTAC            TTTTTTCTTTAGCGA  89 104
SAHC1340_RS08785 NONE
SAHC1340_RS08790 NONE
SAHC1340_RS08795 1731582 .. 1731599 +  -5.5  -3.10715   ATAAAAATCAAAAAA             CGCCTAC TAGT GTAGACG              TTGAATGGTGGTGAG  54 237
SAHC1340_RS08800 1731971 .. 1731986 +  -6.2  -3.87562   AAATACTGGTTTACC              GTTGTT ATTA AACAAC               TTGTCTCTTTTGTCT  65 250
SAHC1340_RS08810 1734070 .. 1734091 +    -3  -3.19563   AATCAAATATTTTAT           TACATCGA CAATTT TCGATGCA            TATTCATCATATATA  47 407
SAHC1340_RS08850 1742356 .. 1742367 +  -3.6  -4.93696   TGGCGTAACGTATGT                GGCG TTAA CGTC                 TTTTTAATGTTTGCC  70 272
SAHC1340_RS08870 1745232 .. 1745276 +  -7.4  -4.06491   TTTCAGTAATAAAAA CAGCAGCA-TGAGGCGTTT CATTATAA AAATGCCTTACTGCTGTTG TTTATGTACAATTCG  72 48
        proC 1747406 .. 1747457 +  -2.4   -5.0809   AAGACCAATAAAAAC AAACCCGCCA-ACACA-TGTATGC ATCATC GCAAGCACTGTGTTTGACGGGTTA TTTTTATAATTTATT  65 30
SAHC1340_RS08895 NONE
SAHC1340_RS08900 1751338 .. 1751390 + -10.2  -2.54803   ATAAAAAACAAAGAA GCCCCCTAATA-TATCTATAGGTC TACAAAT GGCCT-TAGATTCTATTAGGGGGC ATATTAATATGTTAA  78 44
      prli42 1757991 .. 1758012 +    -3  -3.55761   CGCATGTATTAATAA           GTTATCGT ATTGCA ACGATTAC            TTTCAAACATGGGTC  49 97
SAHC1340_RS09025 NONE
SAHC1340_RS09030 1775523 .. 1775545 +  -3.5  -4.17132   TCTGTTAATTCAAGT           GGCTTAAAT TCTAT ATTTAAACC           TTTCTTAAAACCTTT  57 174
SAHC1340_RS09040 1777266 .. 1777278 +  -7.7  -3.88559   TCACAGTTGTATGTG                GTGCT TCT AGCAC                TTTATCAGGATCATT  73 479
SAHC1340_RS09200 1806152 .. 1806191 +    -8  -5.12916   TTTTCTATTCAAAAA  GGTATTCAAATAAACACA TCTA TGTGGCTACTTGAATACC   TTTTATTATTTTATG  91 120
SAHC1340_RS09305 1825559 .. 1825588 + -15.3    -5.252   AATAATCTTTTTAAA       TAAAAGTTCAAGC GCAT GCTTGAACTTTTA        TTTTTTATAAAGATA 100 36
SAHC1340_RS09380 1836397 .. 1836407 +  -5.4  -3.63059   GTTAATCATATTTGT                 TTCG TAT CGAA                 TTCCTTTGTGCATTA  59 64
SAHC1340_RS09490 1860768 .. 1860814 + -12.3   -3.6106   AATGCAAATATGAAA GCGCCCCTTCAACTTTACACT GTGTA AGTGTTTATTTGATGGGGCGC TTTCAAAATATTGAA  95 175
SAHC1340_RS09510 1863157 .. 1863203 +  -8.2  -4.74012   ATAATCAAATCAAAA CTGACTAGTACACGAGGCATA TTCTAC TATGCTT-GCGAACTAGTCAG TTTTAGTTTTATGGT  87 78
SAHC1340_RS09645 1888203 .. 1888215 +  -3.5  -4.33417   TTACCGCACTTTCAA                TTTAA CAA TTAAA                TTTATTCTGCATAAC  59 14
SAHC1340_RS16750 NONE
      erm(A) 1891002 .. 1891036 +  -9.5  -3.61894   ACTAAATTAAAGTAA     TAAAGCGTTCTCT AATTTCACA AGAGGACGCTTTA     TTCTTCCCAAAAATT  84 36
SAHC1340_RS09710 1901996 .. 1902010 +  -2.2  -4.18934   AATAGACTGTCTCGT               TTTTTA ATG TGAAAA               TTTATTCAAATCATA  52 88
SAHC1340_RS09885 1938355 .. 1938389 +  -8.9  -5.25893   AGGCAATGTAAAAAA    GCTGATTTCTAT-TAA TTAT TTGTATAGAAATCAGC     TTTTTTGATATGTAT 100 75
SAHC1340_RS09940 1953938 .. 1953950 +  -3.5  -3.21236   GATTAGCGAGGTGTT                TTTTA GTG TAAAA                TCTATATTCTATTTA  47 305
SAHC1340_RS09950 1956264 .. 1956275 +  -2.2  -3.99957   TGCAACGCCTTTATT                GGTT ACGT GACC                 TTTGTAAGTATTTAA  52 407
SAHC1340_RS09965 1957997 .. 1958020 + -11.1  -5.74288   CTTGATCATTATGAA          CCAAGTGCA ACTTTC TGCACTTGG           TTTTTTATTGTTTAT 100 65
SAHC1340_RS10000 1964606 .. 1964630 +  -7.1  -3.29013   CCATATAAAAAAGAA          GCTAGACAACG TAT CGTTGGCTAAC          TTCAATTATTAAACT  66 2
SAHC1340_RS10010 NONE
SAHC1340_RS10015 NONE
        rpsD 1969192 .. 1969209 + -11.3  -6.15536   TACGTTCAATACAAA             CACCCAC AATT GTGGGTG              TTTTTTTTATTAATT 100 41
SAHC1340_RS10035 1970671 .. 1970705 +  -6.7  -5.15117   AAATAAAATCGTTAA    GTGATAACGTT-TGTT CGAC AATATAGCGTTATCAC     TTTTTTAGGCTTTTA  84 35
SAHC1340_RS10040 NONE
SAHC1340_RS10045 1973548 .. 1973587 + -13.1  -5.37865   TATGTAAATTCAAAA  TGCCAAGAAGACATTGGA TTACT TCCATTG-CTTCTTGGCA  TTTTTTCATTATTAA 100 47
SAHC1340_RS10050 1973883 .. 1973896 +  -3.9  -2.69719   TACAATGTTATCTTG               CTTAT TGAT ATAAG                ATTCATATTTATCGC  45 193
SAHC1340_RS10070 1978592 .. 1978640 + -14.2  -4.48299   GACAGAAAAGTACAT TAAGAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTCTAA TTTATTTAGCTATGC 100 47
SAHC1340_RS10080 1981262 .. 1981309 +  -5.1  -5.35815   GAATCCAAATATTAA AAACAGCAGTAAGATTATTTTC AATTA GAAAATT-TCTCACTGCTGTTC TTTTTATTTACTCTA  80 74
SAHC1340_RS10095 1984312 .. 1984333 +  -3.8  -4.56597   TTCAAACATTGTCGT           TAGATTCG CCAAAT TGAATCTA            TTTTTAGCACAGCAA  63 146
SAHC1340_RS10110 NONE
SAHC1340_RS10115 1990283 .. 1990328 + -11.3  -3.20462   AAAAGATAAATAAAA GGCATTCTTCCAAC-ACCCATA TAA TTTGGGTCGTTAGATGAATGCC TAATTTTGTGAATTT  93 64
SAHC1340_RS10135 1994893 .. 1994914 +  -4.4  -5.10163   GATGATATCAAAAAA           GGTAAGCA CCTGAA TGCCTACC            TTTTATTTTGAAATT  73 199
SAHC1340_RS10185 2005649 .. 2005688 +  -5.1  -5.93252   TCGTAAAACTTAAAA  ATGAGCCACACCCTAATT AGTAA GATT-GGATGTGGCTCAA  TTTTTTATTTTTGAA  95 69
SAHC1340_RS10230 2016579 .. 2016627 +  -8.7  -4.02535   TCATTCAAATAAAAA TGACCTTAATATAACTGAGTCACT AAAA AGTG--TC-GTTATATTAAGGTCA TTTCGTTAATTATGA  80 84
SAHC1340_RS10260 2029442 .. 2029468 +  -8.1  -4.98436   TGCCAACAACAAAAA         GAGGTTTTCAA CTTAA TAGAAAACCTC         TTTTTATGCTATTAA  91 102
SAHC1340_RS10290 2033548 .. 2033589 + -14.7  -3.41292   AGACATAAACAATAA TTTAGGAGTCTGGAACAAT AATC AATGTTCTAGGCTCCTAAA  TGTTATATTGGCAGT 100 45
SAHC1340_RS10320 NONE
        arsB NONE
        arsC 2041743 .. 2041775 + -15.1  -4.84527   TCTCTAATGCAAAAA      GACGCTTTCTATC AAAACAA GATAGAAAGCGTC      TTTTTAGTATGTCCG 100 242
        sigS NONE
SAHC1340_RS10350 2044443 .. 2044453 +  -2.6  -2.94099   AGTATGATGTCACAA                 TTTT TAT AAAA                 TATATGCTAGCAAAC  42 68
        sdpA 2046156 .. 2046182 +  -9.4  -3.79565   ACTATGATGGAAAAA         CCCCCATAAGCA CAA TGCCTATGAGGG         TTTAAATATATTTAT  86 420
SAHC1340_RS10370 2047643 .. 2047692 +  -8.7  -5.15969   GATATAACATATAAT GAGG-TTTGATAATGCATCGACAA TTT TTGTCGTCGCGTTGCCAAAACCTC TTTTTTAAATTCAAA  95 192
        crcB NONE
SAHC1340_RS10380 2048653 .. 2048672 + -13.6  -4.31433   AATCCCTAATCAAAA            CCACCCGT GTGA ACGGGTGG             TTTGTTCTGCGGCTA 100 231
        pckA 2056530 .. 2056549 + -13.6  -4.31433   AATACTAAATCAAAA            CCACCCGT GTGA ACGGGTGG             TTTGTTCTGCGGCTA 100 46
        yidD 2059083 .. 2059108 +  -9.7   -4.3586   GTTATATCCACTAAA         GGGGGGCGA AATTCGAG TCGCCCCTC          TTTTAATATGCCTGA 100 56
SAHC1340_RS10460 NONE
SAHC1340_RS10465 2064184 .. 2064200 + -12.3  -4.17048   CAGAATAAAATTTCA              GGGTAGC TCG GCTACCC              TTCTTTTACGGAAAA 100 33
SAHC1340_RS10470 NONE
SAHC1340_RS10475 NONE
SAHC1340_RS10480 2066016 .. 2066070 +  -7.3  -3.29147   ATATTTTATAAAATA GACCACGCATACCTATCTATAAACG GACAA TGTTTATAAATGAGTTTGCATGGTC TTGAATTGTATTAAA  66 129
       pepA1 2068714 .. 2068742 + -13.3  -3.32993   CCGCACCAATAAAAA        TCCCCTCACTA CCGCAAA TAGTGAGGGGA        TTGGTGTATAAGTAA 100 52
SAHC1340_RS10515 2069400 .. 2069415 +  -4.8  -4.14627   TATACCAGCTGTAAA              TGATAA CTTT TTATCA               TTATTTATATAACCA  64 514
SAHC1340_RS16780 2083119 .. 2083136 +  -2.7  -4.27441   TTCATCACCGACTTT             CATGTGA TAAG TAACATG              TTTATTGGTAATGAT  58 454
SAHC1340_RS10600 2087528 .. 2087557 + -10.1  -4.85433   CAGCGTTTGGCTTGC       TTAGACGACATGT TCGC GCATGTCGTCTTA        TTTTTACATTTATAT 100 215
SAHC1340_RS10660 NONE
SAHC1340_RS10665 2100383 .. 2100422 +  -5.2  -3.65199   AGAATCGTCTACACT  TAGTTGAACAAATTCTAT GAGA ATAGATATTGTTAAACTA   TTTGGGTAGGCGATT  59 143
        traP NONE
SAHC1340_RS10755 2110472 .. 2110482 +  -2.6  -2.53747   AAGCTCGAACGGGTA                 TAAT ATG ATTA                 ATATTATAACAATTG  40 56
SAHC1340_RS10760 2111025 .. 2111061 +  -5.5  -5.03314   AAATGCCAAATAAAC   GAGATGACATTAGAAAT TAGAT ATTTCT--TGTCATCTC   TTTTTTAAAACTCAA  77 102
SAHC1340_RS10765 2112266 .. 2112300 +  -6.6  -2.99947   AGCAAGGTGTTATTA     TTTGTTTTTAGGCTAT GTA ATAGCTTACAATCAAA     TGTATATAGACCTTG  62 53
SAHC1340_RS10770 2113413 .. 2113453 + -15.5  -5.09426   GCCAATAACACAAAA  CCGAGCGACCGTGGT TCAAAAATCAT ACCACGGCCGCTCGG  TTTTTTCGCATTAAA 100 33
SAHC1340_RS10820 2124825 .. 2124835 +  -5.4  -4.63184   ACATCCTTGGATAAT                 GACT TGT AGTC                 TTTTTCAACTGCGTT  73 215
SAHC1340_RS10875 2135925 .. 2135939 +  -8.6  -3.99806   AGAACCAAAAGGAAA               CCTTGT TTT ACAAGG               TTTCTAATACGTTAT  80 66
SAHC1340_RS11050 2147773 .. 2147787 +  -7.2  -3.80189   AGATTCATTTTATAT               CGTTAA CTA TTAACG               TTTAACTTGATATGT  71 96
SAHC1340_RS11055 2149164 .. 2149202 +    -7  -5.12474   ATTAAATTTAAAAAA  GCAGTAAGATTATTTTC AATTAA GAAAATC-TCTTACTGC   TTTTTCTATGTTATG  86 100
SAHC1340_RS11080 2154360 .. 2154400 + -14.2  -5.21709   ATAAAAAATGAACAA  CCGGGCAGAATGAAAATC AAAAC GATTTTTACTCTGTCCGG  TTTTTTAATGTAAAA 100 71
       yfkAB 2161667 .. 2161706 +    -3  -4.36063   TTAAAAACTCTTAAT  TATGCGGAGAAGCACTT TATCGAT AAGTAGT-CTCCGCATA  TTTTAATGCTATTAT  57 37
SAHC1340_RS11150 NONE
SAHC1340_RS11155 2166305 .. 2166332 +  -2.6  -4.86613   GATAATACAATGATT        GGCCAAACTGCA TTGT TTCAGTATTGCC         TTTGTTTTAATTTTA  63 111
SAHC1340_RS11160 2167716 .. 2167773 + -23.4  -3.35191   TTAAAAAAGACTAAA CACCAACAAAACAGAGGTTTTCGCTAAT GATT ATT-GCGAAAACCTCTGTTTT-TTGGTG TCTATTTGATGTTAT 100 27
SAHC1340_RS11190 2173182 .. 2173201 +  -9.4   -3.6761   CTTGCATTGTCTGTA            GAAATTGG GAAT CCAATTTC             TCTTTGTTGGGGCCC  84 183
        ftnA 2177026 .. 2177065 +  -5.9  -5.46698   TATTATTTTGCTTTA  CGGAGATCACTAGATTCA TTTTC TGAATC-ATTGATCTGCG  TTTTTTCATTTTCAA  86 120
SAHC1340_RS11225 2178270 .. 2178283 +  -5.3  -4.78753   GTTGCAAATGTGCGT               TCAGT CCCT ACTGA                TTTTCTTACTCTTGA  74 421
        putP 2188249 .. 2188288 + -11.7  -5.33331   TTAACAAATTAAAAA  GGTACTAATGTTAATCA AAATTA TGACTAACATTGGTACC   TTTTTATTATCTTTA 100 51
        scpA NONE
SAHC1340_RS11310 2198890 .. 2198927 +  -8.7  -3.93038   ATGTATAAACAAATA   GGCTATTCAAAGT AAAATTACTCAA ACTTTGAATAGCC    TTTCCTCTTCAAATA  80 241
SAHC1340_RS11335 NONE
SAHC1340_RS11340 2204391 .. 2204430 +    -8  -5.00611   TAAATAAAATAAAGA  GTCAACCAAGGATTAA AATAGGAA TCCATCCTTGGTTGAC   TTTCTTTTGTTTGTA  91 66
SAHC1340_RS11345 2205004 .. 2205016 +  -4.7  -2.79718   CAAATAAAATTAATA                CACCC CAA GGGAG                CTCTTTTGCAACTTC  51 500
SAHC1340_RS11360 NONE
SAHC1340_RS11365 2209364 .. 2209404 +  -7.3  -5.67283   GTTGTATTTAACTAA CAGTTCATT-AAAGTAGAA TTTAT TTC-ACTTTCAATGAACTG TTTTTTATTTACGTT 100 69
SAHC1340_RS11375 2211201 .. 2211215 +    -5  -4.94902   ATACACAAATTTTTT               GGAAAC ATG GTTTTC               TTTTTATCATGATTA  72 107
SAHC1340_RS11385 2213433 .. 2213474 + -15.6  -5.07107   TGTATAAATAGAGAA CAGCAGTAAGAT-ATTTTC TAATT GAAAATTATCTTACTGCTG TTTTTTAGGGATTTA 100 520
SAHC1340_RS11395 2215300 .. 2215311 +    -3   -5.2853   TTTTCCCAACTTTAC                CATT AGTA AATG                 TTTTATTTTTAACTA  74 150
SAHC1340_RS11415 2217914 .. 2217952 + -10.5  -4.64495   TTACAATAAGACAAA   CTTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAAA   TTATTTTTATTAAAT 100 43
SAHC1340_RS11455 2223803 .. 2223836 +  -6.2  -5.93252   GATAATTAATTTCAA     CCAATAATCTGA TGAGTATGAC TCGGATTATTGG      TTTTTTATTTTTAAA 100 36
SAHC1340_RS11475 2227558 .. 2227571 +  -3.1  -3.82261   ATATTTTTTATTTTC               TACAC TTCT GTGTG                TTACTTTTGTTAAAA  51 275
SAHC1340_RS11485 2227935 .. 2227986 +   -17  -4.11692   AAGTAGCTCCTATAT GAAAAATAGAGGTCTTTCCATT TAGATAGT AGTGGAAAGACCTCTATTTATC TTTTGAAAGTGAATA 100 81
SAHC1340_RS11490 2230140 .. 2230156 +  -3.8   -4.7261   CATTTTTTATTCTCC              TTAGTA ATTAG TACTAA              TTTATTTTAATGACT  66 496
SAHC1340_RS11500 2231297 .. 2231344 +    -8  -2.96452   TAGATATTTCTTTTT TATATAAAGGTTTGGC-AGACAT TTC ATAACTTGCCAAACCCTTATATA TCTAATTATCAAACT  70 64
SAHC1340_RS16405 2234221 .. 2234255 +  -2.3   -5.5604   AAATTAATAACCATT    TAACCATCG-AAAC CAGCCAAA GTTAGCGATGGTTA     TTTTTTATTGCTTAA  70 46
SAHC1340_RS11715 2262461 .. 2262471 +  -5.4    -4.431   TTTATCTTGTTTCAG                 CAAG TCG CTTG                 TTTTGTAGCTAAGTG  69 423
SAHC1340_RS11755 2265981 .. 2266020 +  -3.8  -5.79595   ATTGAATATTAACGG  GTCGTCTATTACCTTCT TCGTCAT AGTA-GTAATAGATGAC  TTTTTTGTTTTGAGC  90 348
SAHC1340_RS11775 2267427 .. 2267450 +  -6.7   -3.9735   AAAATCCTCCCTTTC          CGTCACTCT TTAATT GGAGTGGCG           TTGATTTTTTCGTCT  70 47
SAHC1340_RS11790 NONE
SAHC1340_RS16920 NONE
SAHC1340_RS11795 2269227 .. 2269238 +    -3  -3.56559   CATGAAAAAAGCAAT                CTTA ACTT TAAG                 TCTTATATTTATTAC  49 94
SAHC1340_RS11800 NONE
SAHC1340_RS11805 2270283 .. 2270305 + -12.8  -5.63504   AGCTTTCGGCTCACT           GACGTCTGTA TTA TACAGGCGTC           TTTTTTTATACAATT 100 104
SAHC1340_RS11810 2271788 .. 2271798 +    -4  -3.86346   CGATAATGATAGCAA                 CAAA GGC TTTG                 TTTATACAAAAATAG  54 399
SAHC1340_RS11830 2276601 .. 2276634 + -12.7  -5.20154   ATACATTTGAAAAAA     GCTGATTTCTATCAA ATAA TTTATAGAAATCAGC      TTTTTTACATTGTCT 100 342
SAHC1340_RS11845 NONE
SAHC1340_RS11885 2286505 .. 2286538 +  -6.2  -5.77734   CCATAATAAAAAAAA    CGAATCACA-C-ACGG ATTA TCGTCGCTGTGATTCG     TTTTTATTTTTCTTT 100 35
SAHC1340_RS11895 2288803 .. 2288822 +  -9.4  -3.09273   CTTGCATTGTCTGTA            GAAATTGG TGTT CCAATTTC             TCTATGTTGGGGCCC  78 226
SAHC1340_RS11900 2289785 .. 2289826 + -14.9  -5.67063   AACACATGTCATGAC TAAACATAGATTTATGAGA GATT TTTCATAAGTCTATGTTTA  TTTTTTTATAATAGA 100 62
        agrB NONE
SAHC1340_RS11915 NONE
SAHC1340_RS11920 NONE
SAHC1340_RS11925 NONE
SAHC1340_RS11930 2294033 .. 2294049 +  -6.5   -4.3208   AATGCATCCCCTGCC              CCAGTTG TAT CAACAGG              TTTTACCTTATAGCC  74 406
       abc-f 2303512 .. 2303546 +  -9.6   -5.4477   CTATAAAAATATACA     TAACTCTAACTGTA AAATCGC TATAGTTAGAGTTA     TTTTTTTACAAATTT 100 35
SAHC1340_RS11980 2305882 .. 2305892 +  -5.4  -3.13343   TTTTGAAAGCTCGTT                 GCTA CGT TAGC                 TTCAATGATTGGAAT  54 434
SAHC1340_RS12005 2308574 .. 2308602 +  -5.3  -5.94743   TTTTGAACCAAAAAA        TCGAAGGCACC CGTGAAA GATGTCTTCGA        TTTTTGTTTTTTTTG 100 272
        ilvD NONE
        ilvB NONE
SAHC1340_RS12025 NONE
        ilvC 2315390 .. 2315413 +    -4  -3.43042   TACAATGAGGAGTTG          TTAAATATGA GTAG TCATATTCAA           ATTTTTGATACGACA  50 49
SAHC1340_RS12035 NONE
        leuB NONE
        leuC NONE
        leuD NONE
        ilvA 2321231 .. 2321271 + -11.4  -3.73023   ACATAGTAAGAAAAA  CAGTCATAAATTGATTTC TAATT GAAATCATCTTATGACTG  CTTTTTATTATACTT  93 42
SAHC1340_RS12090 2328363 .. 2328382 +    -3  -4.77775   ATTATATAATCAATC            TTTATAAG TCCT TTTATAAA             TTTCTTTTCTACCAT  62 161
SAHC1340_RS12200 NONE
SAHC1340_RS12205 2350895 .. 2350929 +  -7.9  -5.47159   TAATTAAATAAAAAA     GATCGCTGCCATTAA ACGAA TGATTGGCAGTGATC     TTTTTTATATTCAAC  95 38
SAHC1340_RS12225 2357362 .. 2357407 +  -9.9  -4.85918   ACTCGATAATAACAA TCCCTCTTTGAAGTACACATT GTAA AATGTACACTCTAAAGAGGGA TTTTGTTATATAGTA 100 136
         cls NONE
SAHC1340_RS12250 2361061 .. 2361090 +  -2.9  -4.08958   GATATGTTGTTGGGA       CGTTGCAATGTGTA TTA TGC-CGTTGTGACG       TTATTATTTCACACT  55 467
SAHC1340_RS12300 2367829 .. 2367866 +  -3.1  -6.17669   GAGTAAAATAAAAAA  CATTCAAAGA-TT-ATG CCAACA CATTAAATCTTTGAATG   TTTTTTTGTTTTATT  90 35
SAHC1340_RS12445 2393093 .. 2393127 + -18.8  -4.64334   AAATTATACGAAAAA     CCGGTACTTTCAATGT TTA ACAATGAAAGTACCGG     TTTTATTAGCAAATT 100 85
        coaW 2397823 .. 2397869 +  -5.5  -5.20781   AGAAAAATAGAAAAA GACCATTTATATGCGCG-TTGTT TTA AATAAACGC-TATATAAATGGCC TTTTATTTTATGGTC  80 31
SAHC1340_RS12490 2402384 .. 2402398 +  -8.6  -4.16814   TAACCTTAAATATAG               TTGCCA TGT TGGCAA               TTGTTTATCTCCTAA  85 234
        deoD 2406011 .. 2406049 +  -6.8  -5.11389   GATTAAACTCAAAAA  GCCAACACAT-TCTGGG CGTATC CCCATTTATGTGTTGGC   TTTTATTTATATTAT  84 78
        czrA NONE
        czrB 2413401 .. 2413442 + -10.2  -5.51046   CATTAATAATTTTAA CCTACTGCCATTGCATCG ATTAAA CTTTTCAATGGCAGTAGG  TTTTTTATGTCTTTA 100 35
SAHC1340_RS12560 2414755 .. 2414786 + -17.4  -3.36803   CCAAAATAAATTTTA      GAGCCCCTTACAAC TTTA GTTGTTAGGGGCTC       TTATGCATGCGCTTA 100 32
SAHC1340_RS12580 NONE
SAHC1340_RS12600 2424245 .. 2424259 +  -5.6  -3.41988   AAATAAATTAAAAAA               TGGAGG ATA CCGCCA               TGTTATTGAGTACAC  60 46
SAHC1340_RS12605 NONE
SAHC1340_RS12610 NONE
SAHC1340_RS12615 2428054 .. 2428102 +  -6.4   -4.7629   TCTGAACATAAAAAA TACTCCCTTCA-ACATAGACAC TTAACTT GTGT-TATGTATGAAAGGAGTA TTTTTGCGTTAATAA  77 136
SAHC1340_RS12645 NONE
SAHC1340_RS12650 2442241 .. 2442257 +  -7.9   -3.0782   CTCGAACCCGTGTTA              CCGCCGT GAA AGGGCGG              TGTCTTAACCGCTTG  66 401
SAHC1340_RS12740 2456004 .. 2456031 +  -7.8  -5.66868   AATTGTATAAAAAAA        TCATTCATGGTG AGGG CTTCATGAATGA         TTTTTTTAATTGATT 100 40
SAHC1340_RS12765 2461172 .. 2461183 +    -3  -2.97425   GTAGCGTATCAATCT                TTGA ATCA TCAA                 TATATACCTTATGTA  45 188
        sfaD 2467348 .. 2467389 + -15.6  -3.80279   AAATCCCTAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA 100 171
SAHC1340_RS12880 2484865 .. 2484890 + -10.5  -4.67641   ATCAGTATGTAAAAA         GCATTTCCCGA ATGG TAGGGAAATGC          TTTTAATTTTGGAGT 100 40
SAHC1340_RS12885 2485292 .. 2485312 +  -5.5  -3.45839   TTAATTATATATATT            TCAGAATAA TTA TCATTCTGA            TTGATATTTGGAACT  57 269
SAHC1340_RS12910 NONE
        hysA 2490531 .. 2490563 + -13.7  -4.45083   AAATAAGCAAGAAAA      TCTCGACACTATA CCATTTT TATAGTGTCGAGA      TTTTATAAGTATCGC 100 35
SAHC1340_RS12930 2493373 .. 2493409 + -12.5  -4.78572   ATATCTGGAACCTAA    TAAATCCCCTCACTACT GCT AATAGTGAAGGGATTTA    TTTTATTACTTAGAC 100 218
SAHC1340_RS12945 2496863 .. 2496885 +  -9.2   -4.6645   ACAAACGCAAAAAAA           CACCTCGA CATAACA TCGAGGTG           TTTTGTATATATATC  93 467
SAHC1340_RS13160 2522257 .. 2522279 + -10.6   -5.4251   CTTCAAAGAAAAAAA           CGACTACCAA TCA TTGGCAGTCG           TTTTTTGTGTCTGGA 100 178
SAHC1340_RS13180 2526969 .. 2526999 +    -7   -5.1286   ACACCAAGCAAATAC       CCTACAGTACAT CATTAGC ATGTATTGTGGG       TTTTTCTACTTTTTG  86 42
SAHC1340_RS13185 2528321 .. 2528365 + -13.2  -3.14587   ATGTCATAAATAAAA GCCCCCTTT-TCACAATAT ACATTTAC ATATTGTGGTAAAGGGGGC TCTCATTTTCTACGA 100 350
SAHC1340_RS13200 2529696 .. 2529707 +    -3  -4.68424   AATACGTTATATTGA                TGAA TTGC TTCA                 TTTTTCGCTCAATTA  62 101
SAHC1340_RS13205 2530320 .. 2530357 + -12.2  -4.77867   TTCAAATTTTAAAAA   GCCATAAAAGTAGTCA ATATCA TGACCGCTTTTATGGC    TTTTATATTATCTAT 100 163
SAHC1340_RS13220 2535801 .. 2535813 +  -4.9  -4.62904   TCACAATAACAGTTT                CAATT GAA AATTG                TTTTTGAAAATATTT  69 268
SAHC1340_RS13230 NONE
SAHC1340_RS13235 2538399 .. 2538410 +    -3   -2.7035   ACTTGTATCCCATAG                CATT TCAA AATG                 TAATGTATCCCTCAA  43 304
SAHC1340_RS13245 2539077 .. 2539093 +    -8  -3.68024   TGCACATTATTGTAA              GCTGAC TTTCT GTCAGC              TTCTGTGTTGGGGCC  74 234
        moaC 2543921 .. 2543958 +  -2.2  -4.49311   TAAATTATTTTGTAA   GCTCAT-GAATCAGA TGATTTAAT TCTGGTTTAATGAGC   TTTTCTAATGCTAAT  57 38
        fdhD 2548883 .. 2548919 + -13.2  -5.58179   AAAACAATTTAAAAA    GCAGTAAGTTGATTTC TACTC GAAACCAGCTTACTGC    TTTTTTATTCTAATA 100 127
SAHC1340_RS13355 NONE
SAHC1340_RS13360 NONE
        ureC 2557898 .. 2557922 +  -2.2  -3.62046   ACTCAAAGATACTTC          TTATTCTAGG AGGAA CATAGAATGA          TTGTTGAAGAAATCC  46 17
        ureE NONE
SAHC1340_RS13375 NONE
        ureG NONE
SAHC1340_RS13385 2560525 .. 2560577 + -13.2  -3.89336   ATATTAAAATAAAAA GACTAGT-GTACCTTGTTTCAAGCTT AAT AAGCT-GAAATAAGGTATGGCTAGTC TTTAACTTTAATTAA 100 34
SAHC1340_RS13415 2566028 .. 2566056 + -14.7   -5.4387   GATGGCTATGTTTAC        GCCAACAAGGTTT CAA GAGCCTTGTTGGC        TTTTTTAATTTCTAT 100 46
SAHC1340_RS13435 2569739 .. 2569772 + -12.8  -6.04419   TTAATCTCATTGTAA     CTTTGACTAATTTT TATTAC AAAATTAGTCAAAG      TTTTTTTATTCTTTT 100 77
SAHC1340_RS13440 2570490 .. 2570514 +    -8  -5.69023   TCATCAAAAAACTTT         GAGCTT-TCCT TTAT AGGAGAAGCTC          TTTTTTTGCTATTTT 100 91
SAHC1340_RS13450 2571778 .. 2571814 + -11.7  -4.50841   TTATAAAAACAAGAA    CCCCCATATGTTGAG CTCTCGT TTCAACATACGGGGG    TTTTCATATTGTTGT 100 64
SAHC1340_RS13490 2581514 .. 2581555 + -13.4  -3.80279   TCGATTCCTAAAAAA CAGCAGTAAGATGATTTTC AATTA GAAAAT-ATCTTGCTGCTG TTCTCTATTTATACA 100 30
SAHC1340_RS13505 2583495 .. 2583520 +  -9.3  -3.57263   CAGTATGACTTACGG         TAATATATCAA TATA TTGATATATTA          TTTGCACATGGGAGT  84 249
SAHC1340_RS13510 2584726 .. 2584772 + -10.3  -4.27443   TTCTTATATTAAAAA CAAACGCAGTTGATTAACGGA TTCAT TCCATATATCAATTGCGTTTG TTATTTTAATAATGC  91 163
SAHC1340_RS13520 NONE
SAHC1340_RS13525 2587591 .. 2587604 +  -5.9  -3.05294   ATAACATCTAATCCA               GCTGC AATC GCGGC                TGTTGCACCATTTAC  57 444
SAHC1340_RS13545 2589901 .. 2589950 +  -6.2  -5.86465   TATATCATAATAAAA GACACAT--CTATACGATGATCATT TAC AATGATTG-CGTATAGTGATGTGTC TTTTTTTGTATTATT 100 31
SAHC1340_RS13555 2592783 .. 2592794 +  -4.4   -2.9756   TTCGAAACCATGCAC                CATG GCAT CATG                 ATATTCTTTTTTCTT  50 149
SAHC1340_RS13595 2602341 .. 2602369 +  -5.3  -5.94743   TTTTGAACCAAAAAA        TCGAAGGCACC CGTGAAA GATGTCTTCGA        TTTTTGTTTTTTTTG 100 10
SAHC1340_RS13605 2604826 .. 2604863 +  -8.6  -2.54233   AACAAACATAAATAA   GCAGTAAGATGACT ACAACTTAAG AGTCTTCTTACTGC    AATTATTTTTCAAAT  70 144
        sdpC 2607455 .. 2607496 + -16.1  -4.60143   ACAAATAATAACAAA GCGCTTGCTAGTA-CCTCTT AAA AAGATGATGCTAGCAAGCGC TTTTCTATACTATAT 100 33
SAHC1340_RS13625 2609033 .. 2609054 +  -2.5  -3.04398   TTGAAATAATTACCT           TTCATTATAA GTG TTA-AATGAA           CTTTTCAAAACAAAA  42 32
SAHC1340_RS13660 2614919 .. 2614956 +  -2.7  -5.42975   TATCTCCTTATAAGT   CAATCAATCGTGCCGTCA ACA TG-CGGATGGGTTGATTG   TTTTTCTTTGTATCC  71 80
        gltS 2616426 .. 2616455 + -18.1  -3.98661   CACCAAACTCATAAA       TAAAAGAGGAGGC CTTC GCCTCCTCTTTTA        TTTATCCTCGATGTA 100 42
SAHC1340_RS13680 NONE
SAHC1340_RS13685 2619531 .. 2619581 + -10.6  -3.11905   TTTTCAAAAACAAAA CCCAATTACGTTTTCATGTCAAAT ATC ATCTTGCATGAAATCGTAACTGGG TCATTTATATGTTAT  84 68
SAHC1340_RS13695 2621837 .. 2621851 +    -5  -3.79162   AATTCACGCATATGA               TCTTGT ACA ACAGGA               TTCGTTTTATCTAAC  59 500
SAHC1340_RS13710 2625347 .. 2625363 +  -2.1  -3.07043   AAACCAAGTGTCGCA              ACACCTG TCA CTGGTGC              TATTAAAATGATAAA  42 501
SAHC1340_RS13740 2629976 .. 2630017 + -15.6  -3.80279   AATCCCTAAAAAAAA CAGCAGTAAGATAATTTTC AATTA GAAAAT-ATCTTACTGCTG TTCTCTATTTATACA 100 166
        hssR NONE
        hssS 2634807 .. 2634847 +  -8.6  -3.97283   ATTCACTTTAATCTC TACCTCCTGAAA-AAACAT TTCT GTTTTTATTTCAGGAGGTA  TCTTTTATATTGATT  80 30
SAHC1340_RS13770 NONE
SAHC1340_RS13775 2635882 .. 2635916 +  -7.3  -4.28187   TTAACCACTAAAAAA     CGGTAATGTCTAT CACATTAAA AAAGACATTACCG     TTTCGTTTATTATTT  76 47
SAHC1340_RS13785 2639528 .. 2639556 +    -6  -5.37593   CAAAAAAAACAAAAA        TCGAAGACATCT TTCAC GGGTGCCTTCGA        TTTTTTGGTTTCAAA  86 65
SAHC1340_RS13795 2643295 .. 2643328 +  -5.4  -5.43553   AAAATACGCAAAAAA     CGGTAAACCCTA ATTCATATTA TAGAGTTTACCG      TTTTATTTTTTAACT  82 108
SAHC1340_RS13810 2646032 .. 2646054 +  -8.4  -5.40004   AGTATTCATGAAAAA           GACATCCCGT TAT GCGAGATGTC           TTTTTTAATTTAGTA 100 39
SAHC1340_RS13845 2650443 .. 2650453 +    -4  -3.10112   AACCGTTTGCATAAA                 TCAA ACC TTGA                 TTCACTAACTTAAGT  48 2
SAHC1340_RS13850 2651839 .. 2651854 +  -4.6  -2.51849   TAATGCTGAAATACC              TGCGGC AGAT GCCACA               CCTTTTAACTTCTTA  47 408
SAHC1340_RS13860 2653607 .. 2653619 +  -2.7  -3.88062   GTTCAGCAATTCATA                CTTTG TAC TAAAG                TTTACTATAATCTAT  49 82
         rsp NONE
SAHC1340_RS13870 2657764 .. 2657802 + -10.4    -4.788   ATGTATTGTTTTTTA   GACACACTTTATTCACAT TTA ACGTGATTAGGGTGTGTC   TTTTTAAATTAATTT 100 153
SAHC1340_RS13875 2658310 .. 2658353 + -13.4  -5.19879   TATATACGAGTAAAA GCAGCGGTAAGTTGATTTCCA ATT TGGAA-TCATTTTACTGCTGC TTTTTATATTTGAAA 100 78
SAHC1340_RS13890 2661515 .. 2661527 +  -4.9  -4.08706   TACTCATATAATGGC                TTTGT AAT ACAAA                TTTCTATAATGGAAG  63 211
SAHC1340_RS13895 2661995 .. 2662049 + -11.9  -3.66999   TTAAAATGAATACAC TACTAAAGCCTTAATGTCATGCTACGA ATA TTGC-GCATGATATTAAGGCTTT-GTA TTTAACTAAATGAAT  95 47
SAHC1340_RS13905 NONE
SAHC1340_RS16500 NONE
SAHC1340_RS13910 2665450 .. 2665479 +  -4.9  -4.48741   TCGAAACATACAAAA       GCGCCAGAAGATA ATCA TTTCCTCTCGCGC        TTTTATACTGAATTA  68 223
        fmhA 2687185 .. 2687200 +  -4.8  -4.09656   CTTCATTTATAACAT              TTAAGA AACG TCTTAA               TTCTTCTGTTTTCGG  63 142
SAHC1340_RS14050 2691320 .. 2691358 + -11.9  -5.64274   ACTTCACATATTTAA   GAGCTGCATATACAC TCACTCCTT GTGTACATGCAGCTC   TTTTTTTATAAGTAG 100 135
         sbi 2695377 .. 2695408 + -11.7  -5.46698   AACCGTGATTAAAAA      GAACCGTTGATTC TCAATC GAATCTACGGTTC       TTTTTTCATTTTCCA 100 97
        hlgA 2696793 .. 2696821 +  -6.8  -5.03145   AATCATCTTAAAAAA        TCCTGGGACA CTTCATACT TGTCTCAGGA        TTTTTTAACAAATTG  84 48
        hlgC NONE
        hlgB 2700606 .. 2700637 + -10.2  -4.70353   AAATAGCTAGTAAAA      CACGGTCGCCAACAG TAA TTGT-GACGACCGTG      TTTTGATTTATTATC 100 35
SAHC1340_RS14165 NONE
SAHC1340_RS14170 2713343 .. 2713401 +  -8.3  -5.37043   ATGATAAACATTAAT TCCCTATACTTTATCTGTATCACTACG TTATT CGTGATGATGCATTAAGAGTATAGGGA TTTTTTATATAAACT  93 58
SAHC1340_RS14175 2714720 .. 2714755 + -14.2  -4.11906   ACTTCAACATAATTA    GAACCCTAGCAAAGAT ATCT ATCTTTGTCAGGGTTC     TTCTTTATGAATTAT 100 42
SAHC1340_RS14185 2716098 .. 2716133 + -15.8  -2.52785   CGCGTGTGTAAAACA    TAAAATGCGCAAA-CTG GGT CAGGTTTGCGCATTTTA    AATTTCTATTATTTG 100 55
SAHC1340_RS14195 2718646 .. 2718674 + -13.3  -5.42259   AATTTAAACATCTCG        CTCTAGTATCAGT TCA ACCGATACTAGAG        TTTTTTTGAAAATAA 100 39
SAHC1340_RS14200 2720866 .. 2720911 + -13.5   -5.0916   AAGACATAACAATAC CCCCGTACATATGAGACAA AGTCATTA TCATCTCATATGTACGGGG TTTTTATATTCAACA 100 43
SAHC1340_RS14220 2724553 .. 2724605 +  -7.2  -4.65458   AGACATAATAAAAAA GACTTGTTCGAGCCGTGCGTTTGATA ATA TATCAT-C-CACGATTCGACCAAGTC TTTATTCTTTGTATA  81 33
SAHC1340_RS14280 2735463 .. 2735475 +  -7.7   -5.1925   ACTGAACGAAAATGC                GCTTG TAA CAAGC                TTTTTTCGATTCTAG  91 226
SAHC1340_RS14285 2737242 .. 2737269 +  -4.1   -4.3467   ATCGCATCTAAAAAA        GCACACCTG AATTTGATAG CAGGCGTGC         TTTTCATATGAGAAT  61 45
SAHC1340_RS14325 2743328 .. 2743376 + -10.6  -4.00934   TTATAACTTAAAAAT GCCCTCAG-ATAAG-ACTAAGGTT ACA AACCTTAATTCATATTCTGAGGGC TTTAATATTTGAAGT  91 42
SAHC1340_RS14335 2746051 .. 2746092 + -11.8  -4.48299   CATACACATCAAAAA GCACACTTAAAAGTCAGT ATCAAA ACTCACTTTTAAGCGTGC  TTTATTTAGATATAC 100 67
SAHC1340_RS14395 2759601 .. 2759634 + -12.6  -3.16079   AGGGATAAATTAAAA     TGCCACTATACAAG ATTTGA CCTGTATAGTGGCA      TGATTTGTTATGATA 100 51
SAHC1340_RS14430 NONE
SAHC1340_RS14435 2764089 .. 2764111 +  -7.2  -3.00259   AATCATCACTCCAAT           GTTTATATAG TAT TTATATAAAC           TCTCTCGTCTCTCTC  65 371
SAHC1340_RS16530 2764669 .. 2764695 +  -3.8  -4.12859   TATCCTCACTTGGAG         TATATTGTACAG AAT CTGTAAAATAAA         TGTTTTCTTCTTTAT  59 64
SAHC1340_RS14465 2771789 .. 2771806 +  -2.1  -4.42386   AAATTAATGCGATGA             TTTTTAG CTAA TTAAAAA              TTTTATACATCGAAA  55 15
SAHC1340_RS14470 NONE
SAHC1340_RS14475 2772870 .. 2772897 +  -4.2    -3.272   TGTTTGCGAAAAAAA        TACAACCTTGTA CGAA TACAAAGTTGCA         TTAATATAGAATCAT  49 94
        sarU 2779879 .. 2779896 +  -4.1   -4.0896   GCTAGGTTTGATGGT             GCC-GTAC CTT GTGCTGGC             TTTTCAACAAACTTT  62 513
SAHC1340_RS14570 2798756 .. 2798792 + -15.4  -5.25805   TTCTATAAACAAAAA    GCAGTGAATCATTCCA TCTAT TGAAATGATTCACTGC    TTTTTTAAGTTTATT 100 75
SAHC1340_RS14590 NONE
SAHC1340_RS14595 2802383 .. 2802410 +  -4.8  -5.14965   AAAATCATTTTCAAA        TCCCTTCACC CAAATAAT GGTGCGGGGA         TTTTTTCATCCAAAT  74 90
SAHC1340_RS14600 2804763 .. 2804791 + -16.9  -3.36655   CTACACCGAAAAAAA        TCCCCTCACTATT GCG AGTAGTGAGGGGA        TTGGTGTATCTATGC 100 133
SAHC1340_RS14610 2806128 .. 2806167 + -12.4  -3.72324   TTCAAAATCAAAAAA  GCGGGCAGATG-AAAAG TAAAAAT CTTTTCCATCTGTCCGC  TTCTTAATAGAACTG  95 75
SAHC1340_RS14630 2808799 .. 2808822 + -13.2  -5.46657   GGTTAAATAAATTTT          GCGATGGTGC AACT GTACCATCGC           TTTTTTGTTCGCATC 100 35
SAHC1340_RS14635 2809805 .. 2809833 + -12.6   -5.5112   TTTTTTCACGCAAAA       GCCTGCGATT-CA TTTA TGTAATCGCAGGC        TTTTTTATTGCTAAC 100 64
SAHC1340_RS14645 2811829 .. 2811865 + -13.9   -4.6645   AATTAATATATATAT    TTAAAAGCAAAGGCGCG CCA TGTGCCTTTGCTTTTTA    TTTTGTATATCTGTA 100 35
SAHC1340_RS14655 2813827 .. 2813837 +  -2.4  -3.66921   CATTAATTTATAATT                 GAGG TGT CCAC                 TTTGAAATTAGAATT  47 28
SAHC1340_RS14660 2814571 .. 2814593 +  -7.7  -5.28561   ATGTAGTATAAAAAA           GGAGCGGTA TACAT TGCCGCTTC           TTTTTATTATGTATT  91 35
SAHC1340_RS14670 2816172 .. 2816193 + -11.7  -2.72344   ATGTAGTGGTTCTTA           CACATTAGC CACA GCTAATGTG            TACTTAAAAATAGGA  93 171
SAHC1340_RS14700 2820272 .. 2820282 +  -5.4  -4.25111   TCATCTAGACCACTA                 CATC TTA GATG                 ATTTTTTTATTTTCT  65 91
SAHC1340_RS14705 2821611 .. 2821627 +  -6.6  -3.07891   CCTAAACCATCTAAG              TCACCA TTAAT TGGTGA              TACTTTGTAGTTATC  59 312
SAHC1340_RS14750 2830422 .. 2830445 + -13.2  -4.93316   CACATCATCTCATGT          TAGCGCTCTG ATTG CAGGGCGCTA           TTTTTAATGTTATTG 100 59
SAHC1340_RS14755 2831697 .. 2831718 +  -3.2  -4.35524   ACTATAATTACCACT           TTTATATA GAACTA TATATAAA            TTTTAACTTTGAGAC  57 513
SAHC1340_RS14780 2835540 .. 2835580 + -14.2  -3.80279   AATAAAACCTAAAAG  CAGCAGTAAGACCACTTC TAATT GAAATCGTCTTACTGCTG  TTCTCTATTTATAAC 100 63
        clpL 2838737 .. 2838766 +  -5.1  -5.73672   ATCGCGCATCAAAAA       TGAGCATCAGGT CGCCCTT GCCTG-TGCTCA       TTTTTTTAATTATTT  83 55
        farR 2844634 .. 2844672 +  -8.4  -5.98675   CATTCATAATAAAAA  CGATAGT-GTACACG TTAATGAATT CGTGTACTACTATCG   TTTTTTATTTTTATC 100 69
        cwrA 2847810 .. 2847846 + -19.7  -5.61881   TATAGATGCTAAATA    GAGAGATTGTTGTGCAA TGT TTGCACGGCAATCTCTC    TTTTTCTTTTTAAAA 100 126
SAHC1340_RS14840 2850566 .. 2850585 +  -9.4  -3.09273   CTTGCATTGTCTGTA            GAAATTGG GAAT CCAATTTC             TCTATGTTGGGGCCC  78 234
        copZ 2851307 .. 2851323 +  -3.7   -3.1355   TAAAACGCAATATGT              GGTGTTA ATA TGACATC              TTCCCTGTCAATCAA  47 224
SAHC1340_RS14910 2866647 .. 2866684 +  -6.5  -5.63236   AACTGAATGAAAATA   AGCTTGTCATTAAAA CATATAGA TTTTAGTGACAAGCA    TTTTTGTTTTTGCGT  95 195
SAHC1340_RS16560 2867363 .. 2867373 +    -4  -3.29263   TAATCTCAAAATATA                 TCAA CAC TTGA                 TTCTAAGGAGGATAT  49 213
SAHC1340_RS14920 2867769 .. 2867780 +    -3  -4.19735   TGGGCTTTTTATTTA                TTCT TTTG AGAA                 TTTCATTTTAGCAGA  55 169
SAHC1340_RS14940 NONE
SAHC1340_RS14945 2870700 .. 2870711 +  -4.4  -3.11292   GAATGGTGAAATGCC                TTGG TAAT CCAA                 ATTTATGTTACAAAT  50 19
SAHC1340_RS14950 NONE
SAHC1340_RS14955 2872687 .. 2872727 + -12.7  -4.72696   TTCTCTAATAAAACA  GCTTGGACAGTTTTCAAAT TAT ATTTGATGGCTGACCAAGC  TTATTTTTATTTACG 100 48
SAHC1340_RS15005 2883665 .. 2883692 +  -5.7  -5.43621   TCATCAATCGAAAAA        GCAACGTATCTT ATTTA AAG-TGCGTTGC        TTTTTTCTCATTTAT  86 259
SAHC1340_RS15100 NONE
SAHC1340_RS15105 2900431 .. 2900470 +  -9.4  -4.37506   CGATGATATAAATAA  CCCGAGATTTTAGTATGA TTCA TTTCACTAAAGTCTCGGG   TTTCTATTTGATAAT  88 102
SAHC1340_RS15115 2902114 .. 2902142 +  -7.5   -5.9218   TATGTTATTTAGCAA        GGCAAGCCA CTCTTAATTCA TGGCTTGCC        TTTTTTTATTGTATA 100 72
SAHC1340_RS15130 2904627 .. 2904660 +    -9  -2.84865   GTATAACAAGAGAAA     GCCACACGCTTGG AATCTTAAA CCAAG-GTGTGGC     CCTTTTTATTATTGA  74 92
SAHC1340_RS15150 2907663 .. 2907676 +  -3.9  -2.85351   CGCGTATCAACAAAA               TATGT AAGC ACATA                TATAATATAAAAAGA  46 19
SAHC1340_RS15170 2911842 .. 2911879 +  -8.8   -5.8901   ATAAAAATTAAAAAA  TCATTTCC-CATCTG-AT TAAC ATCCAGATGTGGAAATGA   TTTTTTATTTTATAT 100 37
SAHC1340_RS15180 2913978 .. 2913992 +  -7.2  -4.93296   TCAAGGTTTATGACT               TGAGAA ATG TTCTCA               TTTTTATCATACTGG  85 87
SAHC1340_RS15185 2914972 .. 2915009 + -10.1  -4.87893   TAAACTACTAAAAAG   GACTCATACAT-GTGCTT TAA AGGCATTGTGTATGAGTC   TTTTTGATTAAAGTT 100 68
SAHC1340_RS15225 2923946 .. 2923964 +  -4.6  -4.06505   TTAAATATTTTTAAT             GTCTTTTT TTA GAAAAGGC             TTTATAATGTATTAG  59 37
SAHC1340_RS15230 2924655 .. 2924688 + -12.7  -4.91873   GGTCCACGAAATAAA     CGGTAATTTCTATCT CAAT AAATAGAAATTACCG      TTTTTGCTTAATATC 100 94
SAHC1340_RS15240 2926784 .. 2926800 +  -3.8  -4.84017   AAATGATTGTTAGGT              CATATT CTATC AATATG              TTTTTCTAAAGAATT  68 138
SAHC1340_RS15280 2934253 .. 2934291 + -10.4  -3.53115   TTCTAAATATAAAAT   GCCTCCTAATGACATACT ATT AGTACATCATTAAGAGGC   TCTTGTGTTATTTGC  88 56
SAHC1340_RS15335 2942537 .. 2942594 +  -9.7  -2.87527   TTTGATATATTCAAG TAAAGCATAAAAAA-TCCCGAGCA-CT ATAACA AGATGTTCGGGAATTTTTTATGGTTTA ATTTAGTACTCAATG  77 23
SAHC1340_RS16945 2943088 .. 2943101 +  -3.9  -3.58864   GCATGTGATCCTTGT               TTAGA AATT TCTAA                TATTTCTAGTAATGA  52 396
SAHC1340_RS15400 2957521 .. 2957561 +  -7.1  -4.34285   ATAAATTCAGAAAAA  CAGCAATGAGATATTTT TCTATTT GAAATATCTTACTGCTG  TTCTTTATTTGCATA  76 75
SAHC1340_RS15405 2959580 .. 2959610 +  -4.9  -5.78622   TTTGAATACTTACAA       GAATAATTGCC ACTAGTAAC GGTAATTATTC       TTTTTTTTAGCATCA  87 20
SAHC1340_RS15410 NONE
        manA 2962634 .. 2962669 + -10.6  -4.44392   CTAAAAACATAAAAA    TCCACACATTAAGG AGCTATAA CCCTAATGTGTGGA     TTTAATTTTTATTCT  91 93
SAHC1340_RS15425 2967823 .. 2967851 + -14.6  -3.22496   TCTTATTCAATTAAA        CCCGAGGCATTC AGTTC GAACGCCTCGGG        TCATTTTATATAAAT 100 119
SAHC1340_RS15475 2983049 .. 2983067 +    -6   -3.1247   GATGTGCTCGTGCTG             TGTGTATG ATG CATACTCA             TTGAGTCTGACGGAT  57 419
SAHC1340_RS15500 NONE
SAHC1340_RS15505 2991572 .. 2991583 +    -3  -2.56046   CCCTCATAAATACTG                TCAT CAAT ATGA                 TAAGTTACAATTTCG  42 231
        pgaC NONE
        icaD NONE
        icaB 2999554 .. 2999564 +  -2.6  -3.77111   AGTACTACAGTTCTA                 TATT CGT AATA                 TTGTCATTTTTGGTA  49 146
SAHC1340_RS15650 3017984 .. 3018016 + -11.5  -5.41941   TTAATATATACGAAA      TGCCAACTATATC ATCCCTA GGTATAGTTGGCA      TTTTTCTTTAATTTA 100 66
SAHC1340_RS15660 3020287 .. 3020322 +  -4.1  -4.45201   TACCTTTCAAAACAC    GCTTTGAAAATCC GATTTATAAA GGTTTTTCAAGGC     TGTTTTTTTATGCGC  63 52
         pcp 3021112 .. 3021125 +  -3.9  -4.11748   TTGTTAATAGGGTAA               TACTT ACGG AAGTA                TGTTTTATTTATGGG  58 86
        bstA 3021633 .. 3021655 +  -6.3  -6.28401   AATATGTGCTTATTA           ACCGTTAAC AACAC GTTAACGGA           TTTTTTTATTTTTTA 100 40
SAHC1340_RS15680 3026386 .. 3026428 +  -8.8  -3.52627   TCATCAAACAAAAAA CACTTTCGCTTAAATTCAT TTAATT ATGAATTCAA-CGAAAGTG CTTTATTTTATATTT  76 407
SAHC1340_RS15690 3028277 .. 3028293 +  -5.2  -4.27861   CTCAAATTATATATC              GCAAAA AATTC TTTTGC              TTTTACATGTATATT  67 44
SAHC1340_RS15695 3029578 .. 3029588 +    -4  -3.23393   GAGCGTATTTTTCTA                 TCTA AAA TAGA                 TCTTGTAAAATCCAG  49 166
SAHC1340_RS15700 3030492 .. 3030523 +  -9.5  -5.14965   TAATCATAAAAATAC      GGACGTAACTTAC TTTAAT GTAGGTAACGTCC       TTTTTTAATACACAT 100 38
        vraD 3032323 .. 3032336 +  -2.4  -3.60006   ATCAGTATTAGGTGG               TGTC TCAAAT GACA                TTTAACCATATCGTT  47 7
        vraE 3034260 .. 3034277 +  -2.1  -2.91276   TGATTTTAAGCAATG             CAGTATAA CTA TTA-ACTG             ATTTATAAAAAGGAG  40 74
        vraH 3034863 .. 3034902 +    -3  -4.81551   GAACACACGATCAAT  TGTTCTGTTAAAACACTT TACA GAATGTTTAAAGAGAACA   TTTTTGCTGTACATG  62 394
SAHC1340_RS15745 3038379 .. 3038407 + -14.1  -5.70829   ATGAATCGCTTTGAT        TACCAACAAGGTT CTA AATCTTGTTGGTA        TTTTTTTATGCTATT 100 69
        rpmH 3046172 .. 3046193 - -11.7  -5.72207   TTTAAACGAAAAAAA           GATCACTGA TGAG TCAGTGATC            TTATGCAGATAAAAC 100 26
        rnpA 3045644 .. 3045668 -  -2.9  -3.19513   ATAACTCTAAGGTAA          GTCTTACGT TTGTCTG AGGTAAGAC          TCCGGGGTGTGTTGA  46 78
        mnmE NONE
        mnmG NONE
        rsmG NONE
SAHC1340_RS15765 3040586 .. 3040614 -  -5.3  -6.09196   CGTAAAACAAAAAAA        GACAAAGCTGTAA TGA TCTTAGCTTTGTC        TTTTATGTGTTAGTC 100 64
SAHC1340_RS15760 3039700 .. 3039713 -  -2.5  -2.76696   TCTGCCTCCAATAAT               TTATT ACTT AATAA                CTGAATACAACTAAT  40 59
SAHC1340_RS15755 NONE
SAHC1340_RS15750 3038351 .. 3038371 -  -9.1  -5.18371   TCTTACAAAATAAAA            CGACTCATT ATA AATGAATCG            CTTTGATTACCAACA  95 116
SAHC1340_RS15740 NONE
SAHC1340_RS15735 NONE
SAHC1340_RS15730 3035536 .. 3035561 -  -4.7  -5.30686   AAGATTTATAAAAAA         GCCGTTGGTCTC TTC GAAA-CTACGGC         TTTTCTCTGTGCTAT  77 45
SAHC1340_RS15705 3030728 .. 3030756 -  -8.9  -5.33331   CAAACACAACAAAAA        GGATATGGCACAA ACT TCATGCCACACCC        TTCTTTTGAACCGCT 100 50
        rarD 3026386 .. 3026428 -   -11  -5.68438   TCATCAAACAAAAAA CACTTTCGCTTAAATTCAT TTAATT ATGAATTCAA-CGAAAGTG CTTTATTTTATATTT 100 150
SAHC1340_RS15675 3021634 .. 3021654 - -10.5  -3.14683   ATATGTGCTTATTAA            CCGTTAACA ACA CGTTAACGG            ATTTTTTTATTTTTT  86 150
SAHC1340_RS15655 3017984 .. 3018016 -  -9.3  -3.93383   TTAATATATACGAAA      TGCCAACTATATC ATCCCTA GGTATAGTTGGCA      TTTTTCTTTAATTTA  87 98
SAHC1340_RS15645 NONE
SAHC1340_RS15640 NONE
SAHC1340_RS15635 NONE
SAHC1340_RS15630 NONE
SAHC1340_RS15625 3012474 .. 3012487 -  -2.5  -2.65271   GATAATGTCATAGTA               TTTTA TTTA TAAAA                CACAATATCTCCTTG  40 14
SAHC1340_RS15620 3011092 .. 3011107 -  -4.8  -2.72144   GTATTGGTTTTAAAT              TTTTTC AAAA GAAAAA               GGCAAGACATTTGTG  50 152
SAHC1340_RS15615 NONE
SAHC1340_RS15610 NONE
SAHC1340_RS15605 NONE
SAHC1340_RS15600 NONE
        hisB 3006672 .. 3006683 -  -2.2  -2.77503   ACAATCATTCAATCA                CACC TTTC GATG                 ACGGCACACGCTGAT  40 3
        hisH NONE
SAHC1340_RS15585 NONE
        hisF NONE
SAHC1340_RS15575 3003520 .. 3003559 -  -2.3  -4.08644   ATTAGCATAAAAATA  CACCCCATAAAGTTAG TTTTTTAGT CCAACTTT-CGGGATG  CACATCTTAGTTCTA  52 471
        lip1 3000501 .. 3000551 -  -5.5  -4.63184   AAGCTATGTTAAAAA CACGCGGT-GGGCGAAATCAGT TTGAATTG ACTGACTTCGTTTTACCGCGTG TTTAATATTGTTATA  73 346
        icaR 2995949 .. 2995982 - -14.7  -5.68039   AAACTTATAAAAAAA     GCGCCTATGTCATGA TTTA CCATCACATAGGCGC      TTATCAATAAATTAT 100 376
SAHC1340_RS15535 NONE
SAHC1340_RS15530 NONE
SAHC1340_RS15525 2993311 .. 2993332 -  -9.5  -4.72333   AAGCATACTCAAAAA           GACTGGTAC ATGT ATACCAGTC            TAATTCGAAAAAATA 100 48
SAHC1340_RS15520 NONE
SAHC1340_RS15515 NONE
SAHC1340_RS15510 2990957 .. 2990977 -    -2  -4.18763   AAGAAACGGGTAAAA           TGATAAAAC AACC GTTTT-TCA            AAAAATCAAATATTG  52 499
SAHC1340_RS15485 2988563 .. 2988599 -  -8.3  -5.19879   TTTGAAATATAAAAA    TACATCGAAACTA ATTTCAATGTG TAGTTTCGATGTA    TTGAAAATGATTGAA  93 45
        sasA 2982783 .. 2982795 -  -3.5   -2.7556   AATTTTAGCCAACTA                TAAAT TCA ATTTA                TGCTTGAGAATCATC  44 23
       secY2 NONE
        asp1 NONE
        asp2 NONE
        asp3 NONE
       secA2 NONE
        gtfA NONE
        gtfB 2970755 .. 2970800 -  -4.2  -3.20316   TAAACAAAACAAGCA TGACGTAATATCATATTGTC CATGTC GCTAACATCATATTACGTCA AATCTTTTATATTAA  49 72
        sasF 2968670 .. 2968681 -    -3  -3.61536   AATTTAAGGGGGAAA                TAAG ACGT CTTA                 TATACTTAAAAAATA  49 66
SAHC1340_RS15430 2967823 .. 2967851 - -17.5  -3.93288   TCTTATTCAATTAAA        CCCGAGGCATTCA GTT CGAACGCCTCGGG        TCATTTTATATAAAT 100 168
SAHC1340_RS15420 2962634 .. 2962669 - -12.8  -5.36364   CTAAAAACATAAAAA    TCCACACATTAAGG AGCTATAA CCCTAATGTGTGGA     TTTAATTTTTATTCT 100 34
        isaB 2956165 .. 2956199 -  -9.5  -5.35354   CATATAATCAAAAAA     GACTAGTATGTGA CATCATTCC TCACATACTAGCC     CCTATATTTACTTTA 100 41
         aur NONE
SAHC1340_RS15385 NONE
SAHC1340_RS15380 2953260 .. 2953276 -  -2.4  -2.61925   ATACATAAATAAAGG              TATTTT GGGTT AAAATA              TACATTTTTTTATTC  40 35
        arcA NONE
        argF NONE
        arcD NONE
        arcC 2948281 .. 2948292 -  -4.4  -2.75294   TCAAACCTTGCAAAG                TGTC AGCA GACA                 ACTTTTTCATTTGAA  48 84
SAHC1340_RS15355 2947488 .. 2947515 - -10.7  -5.46657   CATGCTAACAAAAAA        GGCCTAACGTA TAAATG TACGTTAGACC         TCATGTTCAACTTAT 100 58
        clfB 2944364 .. 2944383 - -10.8   -5.7946   TTTTCAACAAAAAAA            CCGAATAC AAAT GTATTCGG             CCTAAAAAAGTATTT 100 39
SAHC1340_RS15345 2943368 .. 2943381 -  -5.3  -3.31183   ATAAGCTAAATCTAA               GTTTC ACGA GAAAC                ATTTTTGTGTATCAG  56 164
SAHC1340_RS15340 2942551 .. 2942579 -  -3.9  -5.42265   GTAAAGCATAAAAAA       TCCCGAGCA-CT ATAACA AGATGTTCGGGA        ATTTTTTATGGTTTA  76 266
SAHC1340_RS15325 NONE
        nsaR NONE
        nsaS NONE
SAHC1340_RS15310 NONE
SAHC1340_RS15305 2936141 .. 2936165 - -12.3  -5.35354   CATACAAGTAAAAAA          CCGATAAGACA TTT TATCTTATCGG          TTGAAAATTGTTATT 100 128
SAHC1340_RS15295 2935220 .. 2935256 -  -5.4  -2.59323   AAAATTCGTTATAAC   TATGGATTAAA-GAGCT GCCC AACTCATTTAATCCTTA    AAAACTTCACATGTG  52 248
SAHC1340_RS15290 NONE
SAHC1340_RS15285 2934252 .. 2934292 - -13.5  -4.78848   TTTCTAAATATAAAA  TGCCTCCTAATGACATACT ATT AGTACATCATTAAGAGGCT  CTTGTGTTATTTGCA 100 63
SAHC1340_RS15275 NONE
SAHC1340_RS15270 2931348 .. 2931359 -    -3  -4.35524   GCGTTAAAGTTAAAA                TAAG AAGA CTTA                 CCTTAGACGGTTAGA  57 51
SAHC1340_RS15265 2931143 .. 2931183 -  -2.7  -5.26316   CTATTGCACAAAAAA TCTGGCTAAAGGTCGCTA TGATAG TCACGA-CTTCAACCAGA  TTTCAATTTATCCAT  68 41
SAHC1340_RS15260 NONE
        nrdD NONE
        nrdG 2926854 .. 2926885 - -14.6  -4.74103   TGCCTAACCTAAAAA      GAAGCCAAGGCAAC GGAT GTTACCTTGACTTC       TAATACATATTCAAC 100 36
SAHC1340_RS15235 2924655 .. 2924688 - -14.9  -4.49556   GGTCCACGAAATAAA     CGGTAATTTCTATCT CAAT AAATAGAAATTACCG      TTTTTGCTTAATATC 100 93
        betB 2922235 .. 2922267 -  -5.7  -4.83243   CTTATACAAAACAAA     GTGAGTGTC-TTGT GTTCTT ACAATGGCACTCAC      CTTATCTAATTTTTA  78 38
        betA 2920261 .. 2920289 - -10.3  -5.28315   ATAAAACGCAAAAAA        GCCTGGCACCAAT ACA ATAGATGCCAGAC        TAAAAGTCTACTATA 100 46
SAHC1340_RS15210 2919760 .. 2919789 - -10.1    -3.745   TTAGTCATGAAAATA       GCCGACAACTTCA TCTA TGAAATTACCGGC        CTTGTATTTTAGCTA  89 56
SAHC1340_RS15205 NONE
SAHC1340_RS15200 2917254 .. 2917294 - -11.9  -4.39652   ATCATAAATAAACAA  GCAGTCCAGTGCGTATCAT CAT ACCTTACGCATTGGACTGC  TTTGCTATGTTTATT 100 36
         mqo 2915059 .. 2915099 - -19.3  -5.48825   GATTACGTAAAAAAA  TCGGACAGCTGAAAAATCT TTA AGATTTCTCAGTTGTCCGA  TTTTAAATATAACTA 100 48
SAHC1340_RS15175 2911842 .. 2911879 - -10.1  -5.56112   ATAAAAATTAAAAAA   TCATTTCC-CATCTGATT AAC ATCCAGATGTGGAAATGA   TTTTTTATTTTATAT 100 55
SAHC1340_RS15160 2908655 .. 2908694 -  -7.3  -4.34482   CTTGCTAAAAAAATA  GATCTATCAGTGCCACA TGTTAC CGCAACACTAATAGATC   CTCTTACCATTAATA  76 68
        budA 2907690 .. 2907738 -  -4.9   -5.1764   TATATAATATAAAAA GACCTTAACGATGCATTTAGAAC CACCT GTTCCTAAT--ATCGCTAAGGTC TTTTAATTATATTAG  74 42
        panB NONE
SAHC1340_RS15140 NONE
SAHC1340_RS15135 2904627 .. 2904660 -    -9  -4.37544   GTATAACAAGAGAAA     GCCACACGCTTGG AATCTTAAA CCAAG-GTGTGGC     CCTTTTTATTATTGA  86 54
SAHC1340_RS15120 2902114 .. 2902142 -  -8.2  -3.18582   TATGTTATTTAGCAA        GGCAAGCCAC TCTTAATTC ATGGCTTGCC        TTTTTTTATTGTATA  71 31
SAHC1340_RS15110 2900107 .. 2900121 -  -4.2   -5.9218   CAGATAATAAAAAAA               CAGTAG CGA CTTCTG               ACAACAAAGACACAC  91 444
SAHC1340_RS15095 2897549 .. 2897563 -  -5.8  -4.24948   TGATTATATTCAAAA               TTATTG TAT CAATAA               ATATGTATCATTCCT  68 238
SAHC1340_RS15090 NONE
SAHC1340_RS15085 NONE
SAHC1340_RS15080 2896482 .. 2896496 -  -2.9   -3.6761   TCCCTCCAATAAATA               TAAAG TATTT CTTTA               TTGTGGCGTAACTTC  49 23
SAHC1340_RS15075 2895870 .. 2895884 -  -4.4  -2.53125   ATCCTTTACAAAATT               TTTAAT AAA ATTAAA               CGACTTCTAAAGGGT  48 137
SAHC1340_RS15070 NONE
SAHC1340_RS15065 NONE
SAHC1340_RS15060 2893949 .. 2893964 -  -6.2  -3.02511   GTTATTTTTTTAACA              CTTATC TTTT GATAAG               TGCTTTTTTTGTTTT  60 4
SAHC1340_RS15055 NONE
SAHC1340_RS15050 NONE
SAHC1340_RS15045 2892152 .. 2892169 -  -7.7  -5.06414   TCCCTCCAATAAAAA             TAACCCC AATA GGGGCTA              TTTAAATGTTATTTT  89 23
SAHC1340_RS15040 2889607 .. 2889632 - -11.3  -4.64861   CTCCTTTAAAATAAA         CAGCACATACA ATTT TGTATGTGCTA          AAAATTACATCGCAA 100 30
SAHC1340_RS15035 2888208 .. 2888224 -  -2.3  -2.51462   ATAAAAGATACACAC              TTTTATG CTT CATCAAA              TCACTCCTTATTTAA  39 26
SAHC1340_RS15030 NONE
SAHC1340_RS15025 NONE
SAHC1340_RS15020 NONE
SAHC1340_RS15015 2884247 .. 2884261 -  -4.4  -2.61004   TTACTTTTAAAAAGG               TTATTT ATA AAATAA               GTTATAAGAGGATAT  48 92
SAHC1340_RS15010 2883665 .. 2883692 -  -3.5   -4.7629   TCATCAATCGAAAAA        GCAACGTATCTT ATTTA AAG-TGCGTTGC        TTTTTTCTCATTTAT  64 37
       blaR1 NONE
        blaI 2880218 .. 2880255 - -21.7  -4.83169   ATTTCGGCATAAAAA   GAGAGTGTACAGAAAAT GGTT ATTTTCTGTACACTCTC    ATCTTTAATAATATA 100 122
SAHC1340_RS14990 NONE
SAHC1340_RS14985 NONE
SAHC1340_RS14980 2877238 .. 2877264 -  -6.6  -4.63172   TAGTAAATGAGAAAA         GCAATGTCCTAT ATT AAAGTACATTGC         TTTTTCTATTAACGA  79 34
SAHC1340_RS14975 2876292 .. 2876306 -  -7.2  -3.96148   GTTTTTGATTATAAA               TCGTAA TAA TTACGA               TTTATAAAGTATAGA  72 355
SAHC1340_RS14970 NONE
SAHC1340_RS14965 NONE
SAHC1340_RS14960 2872570 .. 2872596 -  -8.8  -4.84602   ATATAAATAAAGAAA         CTGGCATACCTA TTG TAGATATTCCAG         GCGGTCACTTAGGTT  95 240
SAHC1340_RS14935 NONE
SAHC1340_RS14930 NONE
SAHC1340_RS14925 2867312 .. 2867323 -    -3  -5.04601   CCCAGAAACTAAAAA                CATT ACTG AATG                 TGTTGATAAATTACC  67 490
SAHC1340_RS14900 2864235 .. 2864272 - -10.2  -5.00412   AAACACAATTAAAAA   GCAATCAATACATA-GA TTCCC TCACATGTATTGATTGC   TATTATTGTTATATA 100 195
        isaA 2863062 .. 2863086 -  -7.9   -5.7946   TTTCTAATAAAAAAA          CTCTCCCCA ATTTCTA TGGGAAGAG          CTATATATTTAATGT 100 72
SAHC1340_RS14890 2860502 .. 2860512 -    -4  -3.55889   ATATACCAATTAGAA                 TGTT TAC AACA                 CTTTTTCTGCACCGT  52 149
SAHC1340_RS14885 2859457 .. 2859488 - -10.3  -5.58522   TATATAAAACAAAAA      CGCCAATACTCTC ATGTTA GAGAATATTGACG       TCATTTGATTTACAT 100 45
        crtO NONE
SAHC1340_RS14875 NONE
        crtQ NONE
SAHC1340_RS14865 NONE
        crtI 2853651 .. 2853704 -  -4.1  -4.04474   ATATGCTTATATAAA GTATAACGCCCATCAAGG-T-ACGT ATTCAA ACGTGAACCTTAACAGGCGTCATTC ATTGTTAAATAAAAC  56 121
SAHC1340_RS14855 NONE
SAHC1340_RS14850 2850851 .. 2850883 - -15.1  -3.36492   GCTCCAACTGCATAA      GAGCCACTAATTATT ATA AATAATAAGTGGCTC      TAAAAGGAGGTGAAT 100 340
SAHC1340_RS14830 2846560 .. 2846575 -  -3.3  -3.72009   ATAACATCATTTAAA              CTCAT TTTACT ATGAG               TAAGGTCGGTTTTGC  53 130
        pruA 2844906 .. 2844928 -  -6.9  -5.38958   AGTTATAAATAAAAA           GAGCCAACC GCAAT GGATGGCCC           TTGTTCATTATGAAG  91 43
SAHC1340_RS14820 2844634 .. 2844672 -  -8.4  -5.20333   CATTCATAATAAAAA  CGATAGT-GTACACG TTAATGAATT CGTGTACTACTATCG   TTTTTTATTTTTATC 100 20
        farE 2841352 .. 2841392 - -19.3  -5.08824   CTTCCATGCAAAAAA  CCTCCGCTTCAAATGTC ATTGATA GACATTTAAAGCGGAGG  CATGTACATGTTATT 100 41
SAHC1340_RS14805 NONE
        feoB 2838922 .. 2838951 -  -2.3   -5.4477   AAATTGCTAAAAAAA       TTAAAATGTTAAT AATG ACTGACACTTTAA        CCACTCCTTAAACAA  70 33
SAHC1340_RS14795 2838737 .. 2838766 -  -4.4   -4.7254   ATCGCGCATCAAAAA       TGAGCATCAGG TCGCCCTTG CCTG-TGCTCA       TTTTTTTAATTATTT  68 35
SAHC1340_RS14785 2835539 .. 2835581 - -12.9   -4.4836   TAATAAAACCTAAAA GCAGCAGTAAGACCACTTC TAATT GAAATCGTCTTACTGCTGT TCTCTATTTATAACA 100 116
SAHC1340_RS14775 2832533 .. 2832545 -  -4.9  -4.17556   CATATTGTTAACAAA                TATCA AAA TGATA                GGAACTTGAAGAATC  63 285
SAHC1340_RS14770 2831887 .. 2831899 -  -4.9  -3.23638   TCAAAGATTCATCAA                CAAAA ACT TTTTG                ATAAATTTATATATT  53 95
SAHC1340_RS16935 2831615 .. 2831625 -  -5.4  -2.62667   CTAAGTTTGAAATAT                 TTCG ATT CGAA                 TGTGAAACATCATTT  52 141
SAHC1340_RS14760 2831040 .. 2831053 -  -2.4   -3.4456   GTACACCAAGAAAAT               TTGC TGTCAT GCAA                TCAACTGCAGGATAT  45 446
SAHC1340_RS14745 2829062 .. 2829111 -  -2.5  -5.61596   ATTTTCACAAAAAAA CACTCATTATTTCAATGACCCAC GTAATG ATGCGCC-TT-AAATAATGAGTG CTTTATTAATATGTT  74 39
        cidA NONE
SAHC1340_RS14735 2827845 .. 2827855 -  -2.6  -3.80094   TCTAAATTAATAGAA                 TAAT AAA ATTA                 GAACAGGTATTAACA  49 6
SAHC1340_RS14730 2825975 .. 2826009 -  -9.5  -5.22481   GATAAATAAACAAAA     CGGCAATTCCCATTT TGTTG AAATAGAAATTACCG     TTTTTATAGTTCAAT 100 66
SAHC1340_RS14725 2823560 .. 2823587 - -14.3   -4.7254   ATTGCGCACTAAAAA        GGCAGTAGCTT CATTTT AAGCTACTGCC         TTTTGTAACGTATTC 100 121
SAHC1340_RS14720 NONE
SAHC1340_RS14715 2822481 .. 2822495 -  -2.8  -2.69471   TGATGTCTACATAAT               CTTAGC AAT GCTAAT               CATTTGCGATATTAA  40 37
SAHC1340_RS14710 2821339 .. 2821354 -  -2.6  -3.36919   AGAAAACTCTGATAA              TCACTT TAGC AAGTAA               CTATTATTTAACAAC  45 77
SAHC1340_RS14695 NONE
       sdaAB NONE
       sdaAA NONE
SAHC1340_RS14680 NONE
SAHC1340_RS14675 2816212 .. 2816228 -  -9.5  -3.37164   TTAAAAATAGGAATA              CATGAGT AAA ACTCATG              CATAAGAAATACTAA  82 261
        srtA 2814664 .. 2814683 -  -8.6  -5.69793   ATACCAAACAAAAAA            CAGTCTCG CAAT CAAGACTG             TTTTCCACTCAATAT 100 63
SAHC1340_RS14650 2811835 .. 2811859 -   -10  -4.27259   TATATATATTTAAAA          GCAAAGGCGC GCCAT GTGCCTTTGC          TTTTTATTTTGTATA  91 234
SAHC1340_RS14640 2809805 .. 2809833 - -12.6  -4.18018   TTTTTTCACGCAAAA       GCCTGCGATT-CA TTTA TGTAATCGCAGGC        TTTTTTATTGCTAAC 100 150
SAHC1340_RS14625 NONE
SAHC1340_RS14620 NONE
SAHC1340_RS14615 2806128 .. 2806167 - -10.2  -5.46698   TTCAAAATCAAAAAA  GCGGGCAGATG-AAAAG TAAAAAT CTTTTCCATCTGTCCGC  TTCTTAATAGAACTG 100 41
SAHC1340_RS14585 NONE
SAHC1340_RS14580 NONE
SAHC1340_RS14575 NONE
SAHC1340_RS14565 2796229 .. 2796261 -  -6.3  -5.53288   TTCAACGCAAAAAAA      GCAATAAGCCCCAAC TAT GTGAAAGCTTACTGC      TTGTTTAAATTATTT  89 35
SAHC1340_RS14560 2793882 .. 2793898 -  -2.3   -2.8751   ATACCACCATAATTA              TAAAATG AAA CATATTA              AACACATTTTTTTAG  40 97
SAHC1340_RS14555 2793263 .. 2793291 -    -6   -3.1332   TAATACACTATCGAA        CTTTGGGCTGAT ACTGA AACAGCACAAAG        AAACTCAAACAATTC  57 149
SAHC1340_RS14550 2792459 .. 2792475 -  -2.3  -2.94924   TGTTGATTTACAAAC              TCACTCA AAC TAAGTAA              CACACCTACTAAACA  40 42
SAHC1340_RS14545 2791434 .. 2791453 -  -9.4  -2.66316   TCCTTCATTACACGA            CATACTTG TATA CAAGTATG             TTAATATAGTTATTA  75 135
SAHC1340_RS14540 NONE
        gntK 2789074 .. 2789087 -  -3.1  -2.51627   AATAGAATGTAACAC               CGT-CG TCG CGCACG               TATTCCACATAATAT  42 90
SAHC1340_RS14530 2787617 .. 2787664 - -10.2  -4.82901   TTTTCTGCATAAAAA TAAACGTGTTTCAAGGCAAT ATATTGCA ATTACCTAAAAACACGTTTA CTTAATATTTAGTTA 100 38
SAHC1340_RS14525 NONE
        fnbA 2784102 .. 2784136 -  -9.5  -5.80817   TTTAATATAAAAAAA     CAGGCTTACTTCATA TAATT TATGAAATAAACCCG     TCAATTTTTGTTTAA 100 41
        fnbB 2780598 .. 2780632 - -11.7  -5.09426   TTTAATTTTAAAAAA     CAGGCTTACTTCATA TAATT TATGAAATAAACCTG     TCAATTTTGGATTGA 100 41
        galU 2779375 .. 2779385 -    -4  -3.52472   AGATTCTCAAACCAA                 GAAA ATT TTTC                 TTTTAAATTTAAACA  52 242
        sarT 2777905 .. 2777947 -  -2.2  -5.79595   TTCTAAAATAAAAAA TACCTTAACGCATTTAAA AAATACA TTTAACTGCACCAAGATA TTAAAATCTCGAAAC  77 46
SAHC1340_RS14485 NONE
SAHC1340_RS14480 2772870 .. 2772897 -  -8.6  -5.40072   TGTTTGCGAAAAAAA        TACAACCTTGTA CGAA TACAAAGTTGCA         TTAATATAGAATCAT 100 37
SAHC1340_RS14460 NONE
SAHC1340_RS14455 2766542 .. 2766556 -    -5  -4.22475   TATTTAAAATAATAA               CACTGA AAC TCAATG               TATTTACTTATTAAA  63 88
SAHC1340_RS14450 2765539 .. 2765551 -  -3.4  -2.50307   CAAACTTCTATTAAC                CCTA TTCAG TAGG                TTTGAAATTAATACT  43 14
SAHC1340_RS14445 2764302 .. 2764349 - -12.4  -4.39166   CTTTAGACATTAAAA GCTTCTAACATGATAC-GGAA TATGAGG TTCCTGTATCACATTAGAAGC TTTTTTGTTGCGGTG 100 310
SAHC1340_RS14440 2763714 .. 2763737 - -10.3  -3.82433   ATAAGTATGACTAAA          GCCACATCC AATATA GGACGTGGC           TTTTAGTATCGTTCC  90 170
SAHC1340_RS14425 2762146 .. 2762182 -  -7.7  -2.90208   GAAAATGAAAAAATT    TTTATAATCTATAAT TATGAAC ATTACAGATTATAAA    CCATAACACTAACAT  66 200
SAHC1340_RS14420 2761671 .. 2761693 -  -4.1  -4.83677   AAAACAAAATTAAAA          CGGCCGCATA GTTT TA-GCGGTCG           TTCTTTTTAGACTCT  68 16
SAHC1340_RS14410 NONE
SAHC1340_RS14405 2760554 .. 2760572 -  -6.7  -5.00388   TAAATCAAAAATAAA             GAAGACC CTAGT GGCCTTC             TTTTTTATCTAATTC  84 14
SAHC1340_RS14400 2759601 .. 2759634 - -14.8  -4.62475   AGGGATAAATTAAAA     TGCCACTATACAAG ATTTGA CCTGTATAGTGGCA      TGATTTGTTATGATA 100 78
SAHC1340_RS14385 2756312 .. 2756335 - -10.4  -5.17353   ATACGCACCAAAAAA          GCTTTGTACA ATTT CGTACAAAGC           TTTAAAAATTTAAAT 100 48
        cntK NONE
        cntL NONE
        cntM NONE
        cntA NONE
SAHC1340_RS14360 NONE
SAHC1340_RS14355 NONE
SAHC1340_RS14350 NONE
SAHC1340_RS14345 NONE
SAHC1340_RS14340 2746051 .. 2746092 -   -14  -4.86133   CATACACATCAAAAA GCACACTTAAAAGTCAGT ATCAAA ACTCACTTTTAAGCGTGC  TTTATTTAGATATAC 100 166
SAHC1340_RS14330 2743327 .. 2743377 -  -9.3  -4.78149   TTTATAACTTAAAAA TGCCCTCAG-ATAAG-ACTAAGGTT ACA AACCTTAATTCATATTCTGAGGGCT TTAATATTTGAAGTT 100 127
SAHC1340_RS14315 2742245 .. 2742257 -  -2.7    -3.737   TAATTGCTCATTAAA                GATTA TCC CAATC                AATATCATCTATATT  49 8
SAHC1340_RS14310 2741872 .. 2741914 -  -5.7   -5.1417   TTATAAAATTAAAAA GTGTAGAGATAACAACG-CA TTAA CGTCGCTATTTTCCCTACAC TTAAATACTAGTTTC  80 85
SAHC1340_RS14305 2740491 .. 2740501 -    -4  -3.69359   ATTAAAATTAGACAA                 TTGT TTA ACAA                 CCTACCATATTAAAA  52 67
SAHC1340_RS14300 NONE
        fetB 2738709 .. 2738760 -  -9.7  -5.11937   AATAACTCCAAAAAA GCACGCACGCTTTATATGTCAG AACAGATAA CTGAC-TACAAAGTATGCGTGC CTTTATGAATATTTT 100 129
SAHC1340_RS14290 2737242 .. 2737269 -  -6.3  -5.09225   ATCGCATCTAAAAAA        GCACACCTG AATTTGATAG CAGGCGTGC         TTTTCATATGAGAAT  82 40
SAHC1340_RS14275 NONE
SAHC1340_RS14270 NONE
SAHC1340_RS14265 2732419 .. 2732431 -  -2.7  -3.70676   GACATTTAAAACTAA                CATAC TCT ATATG                ATGTTATTAAACATT  49 97
SAHC1340_RS14260 NONE
SAHC1340_RS14255 NONE
SAHC1340_RS14250 NONE
SAHC1340_RS14245 2728575 .. 2728610 -  -9.9  -4.93318   CACAACCTATAAAAA    GGCTACTCAAAGA TTATTTGAGC TCCTTGAGTAGCC     TCATTTTTTATAAAT 100 80
SAHC1340_RS14240 NONE
SAHC1340_RS14235 2725684 .. 2725724 -  -5.5  -5.20534   ATCAATCAAGAAAAA  CAGCACCAAGATCATTTCA ATT TGAAAGTACCTTACTGCTG  TTCTTTATTTATTAC  80 111
SAHC1340_RS14225 2724553 .. 2724605 -  -7.2  -5.62045   AGACATAATAAAAAA GACTTGTTCGAGCCGTGCGTTTGATA ATA TATCAT-C-CACGATTCGACCAAGTC TTTATTCTTTGTATA 100 57
SAHC1340_RS14210 2720935 .. 2720973 - -14.9  -5.27779   TTCAACATCAAAAAA   TCAGATTGATGAAAAGT AAATA ACCTTTCATCAATCCGA   TTTGATTATAGAATC 100 40
SAHC1340_RS14190 2716098 .. 2716133 - -15.8  -3.63744   CGCGTGTGTAAAACA    TAAAATGCGCAAA-CTG GGT CAGGTTTGCGCATTTTA    AATTTCTATTATTTG 100 23
SAHC1340_RS14180 2714720 .. 2714755 - -14.2  -2.94561   ACTTCAACATAATTA    GAACCCTAGCAAAGAT ATCT ATCTTTGTCAGGGTTC     TTCTTTATGAATTAT 100 96
        gtxA 2710694 .. 2710711 -  -3.3  -3.51232   TCTGCGTTAAAGTAA             CGCCCGA GATG TTAGGCG              ACCATCATATTATAT  49 109
SAHC1340_RS14155 2710506 .. 2710541 - -16.4  -2.57239   AACATCTAAATACAC    CAAATCCCCTCACTAC TGCC ATAGTGAGGGGATTTA     TTTAGGTGTTGGTTA 100 38
SAHC1340_RS14145 NONE
SAHC1340_RS14140 2706305 .. 2706340 - -15.7  -2.57239   AACATCTAAATACAC    CAAATCCCCTCACTA TTGCCC TAGTGAGGGGATTTA     TTTTGCTGTTGATTA 100 90
SAHC1340_RS14130 2705977 .. 2706005 -  -5.6  -3.76125   CCACCTCAATCCAAA       TGTAAACTT-TTA TAAT TAATAAGTTTACA        TTTAAGGCGCATGTT  64 27
        bioD NONE
        bioA NONE
        bioB NONE
SAHC1340_RS14110 NONE
SAHC1340_RS14105 NONE
SAHC1340_RS14100 2700606 .. 2700637 - -11.7  -4.31412   AAATAGCTAGTAAAA      CACGGTCGCCAACA GTAAT TGT-GACGACCGTG      TTTTGATTTATTATC 100 36
SAHC1340_RS14085 2696793 .. 2696821 -  -4.6  -5.07053   AATCATCTTAAAAAA        TCCTGGGACA CTTCATACT TGTCTCAGGA        TTTTTTAACAAATTG  73 142
SAHC1340_RS14065 2693755 .. 2693767 -  -4.1  -3.74693   TTCTACTCTACCAAA                CTCTC TTC GAAAG                ACAATTTTCTCCTCT  54 54
SAHC1340_RS14060 2692296 .. 2692319 -  -9.8    -5.055   CTAAGGTTTAAAAAA          TATTTTTAGG TAAA CCTAAAAATA           GATGTAATAAAAACG 100 83
SAHC1340_RS14055 2691320 .. 2691358 - -14.1  -3.16177   ACTTCACATATTTAA   GAGCTGCATATACAC TCACTCCTT GTGTACATGCAGCTC   TTTTTTTATAAGTAG 100 31
        mdeA 2689442 .. 2689453 -    -3  -2.59055   GAAATGCCGGATAAG                TCAA TATG TTGA                 ACTTTTGCTAAAAAG  42 65
SAHC1340_RS14035 NONE
SAHC1340_RS14030 NONE
SAHC1340_RS14025 2687102 .. 2687157 -  -4.5  -4.49353   TGACAACATAACAAA GAACCACGCATCATG--T-A-TATGGC TTCATC GCCATACTAAAACATGATACGTGGTTC TATTTGATTATTCTT  66 33
SAHC1340_RS14015 NONE
SAHC1340_RS14010 NONE
SAHC1340_RS14005 NONE
SAHC1340_RS14000 NONE
SAHC1340_RS13995 2683705 .. 2683738 -  -6.2  -5.94214   AATATAAGAAAAAAA     GACAATCTCTATCA TATTGC TAATAGAAATTGCC      TTTTCATATTGTCCT 100 80
        adcA 2681897 .. 2681934 - -10.7  -5.68438   CTACGAAATAAAAAA   CACACTCTATTCAGCTA TTAA CAGTTGAGTAGAGTGTG    CAAACCTGTTGAATT 100 39
SAHC1340_RS13985 2681293 .. 2681308 -  -4.8  -3.64755   ACATATTTTCAACAA              CTTTAT TTCA ATAAAG               CATCAAGTTGATCTA  57 12
SAHC1340_RS13980 2680871 .. 2680883 -  -4.9  -3.83066   AATTATATTAGTAAA                TCAAT GTA ATTGA                TAGATTAAATTTCAG  59 171
SAHC1340_RS13975 2679921 .. 2679940 -  -6.5  -5.15969   TCTCAACGTAAAAAA            CCATTCA AATTCA TGAATGG             TTTGGAAGAATGATT  82 73
SAHC1340_RS13970 2679139 .. 2679197 - -16.4  -4.01698   TTAAATCAAAAAAAG CGACCGATATATGAATCCCTACTCAA CATTTAT TTGAGCAAGCATTAATATATCGGTCG CTTGTAGTGTATATT 100 47
SAHC1340_RS13965 NONE
SAHC1340_RS13960 NONE
        nirD NONE
        cobA 2674437 .. 2674477 -  -6.4   -4.1021   TGGCACAACGACAAA TAAGGCTTCAACACGAA TATATTCT CTCG-GTTGAAACCTTA  CTTATTCATTTATTT  70 49
SAHC1340_RS13945 NONE
        narH NONE
        narJ NONE
        narI NONE
SAHC1340_RS13925 NONE
SAHC1340_RS13920 NONE
SAHC1340_RS13915 2665443 .. 2665486 - -11.2  -3.37755   ATATATTTCGAAACA TACAAAAGCGCCAGAAGATA ATCA TTTCCTCTCGCGCTTTTATA CTGAATTATATTAAT  93 49
SAHC1340_RS13900 2662002 .. 2662043 -  -8.9   -3.8448   GAATACACTACTAAA GCCTTAATGTCATGCTACGA ATA TTGC-GCATGATATTAAGGC TTTGTATTTAACTAA  82 62
SAHC1340_RS13885 2659995 .. 2660028 -  -6.3  -2.89068   GAAAATTGATAATTA     TCTATAAAAAATTAA AATA TTTATCTTTTATAGA      TGTCAAAAATCACTA  58 117
SAHC1340_RS13880 2658610 .. 2658638 - -17.5  -4.42653   AGCGCATGCATAAAA        GCCCCTAACAACC AAA GGTTGTAAGGGGC        TTTAAATGTCAGATA 100 48
SAHC1340_RS13855 2651060 .. 2651079 -  -3.6  -2.83082   AAAAAGTTTAGTATA            CTTTTTAG CTGC CTTAAAAG             GTAACGATACAATTA  46 488
SAHC1340_RS13840 2648345 .. 2648386 - -11.1  -5.05113   GCTATACAAATAAAA TAGCTATACCATGACGCTCG CTA CAAACGTCTTG-TATAGCTA TTATTTCTATTTATT 100 44
SAHC1340_RS13830 2647698 .. 2647743 -  -7.1  -5.16133   ATCACAATATAAAAA CACACCTTTCAAAGTAAGA AACAACAA TGTTCCTTTGAAAGATGTG TATATTTTTTAGTTC  86 49
SAHC1340_RS13825 NONE
SAHC1340_RS13820 2646501 .. 2646526 -  -2.7  -2.64034   ACACAATATATCAAC         CTAGTATAAAT GTTT ATTTACAATAG          TCTTATTCGCTTCTT  40 0
SAHC1340_RS13815 2646032 .. 2646054 -  -9.9  -4.75372   AGTATTCATGAAAAA           GACATCCCG TTATG CGAGATGTC           TTTTTTAATTTAGTA 100 35
SAHC1340_RS13805 NONE
SAHC1340_RS13800 2643295 .. 2643328 -  -7.6  -5.19916   AAAATACGCAAAAAA     CGGTAAACCCTA ATTCATATTA TAGAGTTTACCG      TTTTATTTTTTAACT  91 62
SAHC1340_RS13790 2639528 .. 2639556 -  -5.3  -5.94743   CAAAAAAAACAAAAA        TCGAAGACATC TTTCACG GGTGCCTTCGA        TTTTTTGGTTTCAAA 100 93
         mqo 2635882 .. 2635916 -    -8   -5.2189   TTAACCACTAAAAAA     CGGTAATGTCTATC ACATTAA AAAAGACATTACCG     TTTCGTTTATTATTT  93 35
SAHC1340_RS13755 NONE
SAHC1340_RS13750 2630748 .. 2630781 - -14.9  -5.25893   ATACATATCAAAAAA     GCTGATTTCTATCAA ATAA TTAATAGAAATCAGC      TTTTTTACATTGCCT 100 150
SAHC1340_RS13735 2628164 .. 2628210 -  -4.1  -4.95876   AATTATAACTAAAAA GAAGGTGTTCAATACATA CATATTTAGTCT TATAT-TTGAACACCTTC AAAAACCTATTTATG  68 32
SAHC1340_RS13725 NONE
SAHC1340_RS13720 2626319 .. 2626330 -    -3  -3.60818   TTAAAATGCGTTAAA                TCAT TCAT ATGA                 CTATCTCCTTTATAT  49 131
SAHC1340_RS13715 2625044 .. 2625059 -  -4.8  -3.60098   ATTTTTGATGCTAAA              TTCATA GGTC TATGAA               TAGCTCAAGTTTTGT  57 84
SAHC1340_RS13705 NONE
SAHC1340_RS13700 2621516 .. 2621544 -  -5.4  -6.08342   CAACAAATAAAAAAA       GTATCGATAACCA TATT TGGC-ACCGATAC        TTTAAAAATCATGTC 100 89
SAHC1340_RS13690 2619531 .. 2619581 - -12.8  -5.26119   TTTTCAAAAACAAAA CCCAATTACGTTTTCATGTCAAAT ATC ATCTTGCATGAAATCGTAACTGGG TCATTTATATGTTAT 100 40
        corA NONE
SAHC1340_RS13670 2616422 .. 2616459 - -21.7   -2.7213   TAAACACCAAACTCA   TAAATAAAAGAGGAGGC CTTC GCCTCCTCTTTTATTTA    TCCTCGATGTATATT 100 23
SAHC1340_RS13655 2613175 .. 2613200 -  -6.2  -5.42259   TTATTTGTAAAAAAA         TATCCCAGCA TCATTG TGCCGAGATA          TTTATATCATTACAA  89 35
SAHC1340_RS13650 NONE
SAHC1340_RS13645 NONE
SAHC1340_RS16485 NONE
SAHC1340_RS13640 NONE
SAHC1340_RS13635 2609051 .. 2609061 -    -4  -3.62859   ATTATAAGTGTTAAA                 TGAA CTT TTCA                 AAACAAAAAGGAATC  52 226
SAHC1340_RS13620 2607455 .. 2607496 - -16.1  -4.64159   ACAAATAATAACAAA GCGCTTGCTAGTACC-TCTT AAA AAGATGATGCTAGCAAGCGC TTTTCTATACTATAT 100 42
SAHC1340_RS13610 2604826 .. 2604863 -  -8.6  -4.31608   AACAAACATAAATAA   GCAGTAAGATGACT ACAACTTAAG AGTCTTCTTACTGC    AATTATTTTTCAAAT  83 125
SAHC1340_RS13600 2602193 .. 2602213 -  -3.9  -5.84432   TAGAATATAAAAAAA            TTCGTCCAA ACT TAGGCCGAA            AAATTTATATCAATT  90 221
        hutU NONE
SAHC1340_RS13585 2598322 .. 2598367 - -15.1  -3.00946   TGTTTTTACAAACCA CAAAAAGCTCTAAACATTAGT TTAA ACCAATGCTTAGAGCTTTCTA ATTATTTTATGCTTT 100 32
SAHC1340_RS13580 2596969 .. 2596985 -  -2.9  -4.52873   TCTTTATAAAAACAA              GCTCGAA TTA TTCATGC              AATAGTCTCTTTACA  60 16
SAHC1340_RS13575 2595863 .. 2595890 -  -7.8  -4.28045   AGAGTATTAAAATAA        GCCGATAAAGAT ACAC ACCTTTACCGAC         TATTTAAAATACACT  78 119
SAHC1340_RS13570 2594733 .. 2594762 -  -6.6  -4.05402   TTCCAATTAAAAATA       CCTCTTTCTCACA AACGA TG-AAGAAAGAGG       TTTTCATGTGCTTTA  70 191
SAHC1340_RS13565 2593353 .. 2593367 -  -2.8   -3.9644   CTGTTAATATAACAA               GCCA CCTTACT TGGC               TACATCGATATATTG  51 48
SAHC1340_RS13560 2592659 .. 2592713 -  -3.8  -2.93585   TGATATTTCAAATTA GAAAAAAGGAAGTTATGATTTAAT GGCCTTG AGCCTATCATAACTTCCTTTTATC ATTTTATTGTTGTGT  46 29
SAHC1340_RS13550 2589905 .. 2589917 -  -3.4  -3.58542   TCATAATAAAAGACA                CATC TATAC GATG                ATCATTTACAATGAT  50 69
SAHC1340_RS13540 2588147 .. 2588160 -  -3.1  -3.13382   TATCAAAGCTTAACA               TAGTC CGAT GACCA                CTTCATTCTATTAGT  44 45
SAHC1340_RS13535 NONE
SAHC1340_RS13530 2586832 .. 2586851 -  -2.1  -3.93038   GAGCGCAAGATTAAA            CTCGGTA CGACTT TACCGAT             TGCATTAATTATTGG  52 442
SAHC1340_RS13515 2584726 .. 2584772 - -10.3   -4.8048   TTCTTATATTAAAAA CAAACGCAGTTGATTAACGGA TTCAT TCCATATATCAATTGCGTTTG TTATTTTAATAATGC 100 228
        sdpB 2582081 .. 2582114 - -14.9  -5.22312   ATGCATATCAAAAAA     GCTGATTTCTATCAA ATAA TTAATAGAAATCAGC      TTTTTTCATTGCCTA 100 67
SAHC1340_RS13485 2579559 .. 2579580 -  -4.6  -2.80816   TCTCTATTTATTATA           TAGTAAAA TAATTT TTTTACTA            TACTTCTGTAGACGT  49 80
SAHC1340_RS13480 2578425 .. 2578468 - -15.6   -4.9448   AGGCATTAAATAAAA TAGCCCATAAATACAAAGTG TTAT CACCTTCTATTTACGGGCTA TTAGTTCTATTCGTT 100 111
        fdhF NONE
SAHC1340_RS13470 2574479 .. 2574509 -  -6.3  -5.85011   CAAAAATTAAAAAAA      GTGCTCCTACACTG CTTG CA-TGTAGAAACAC       TTTTTCATTGTAATG 100 41
SAHC1340_RS13465 NONE
SAHC1340_RS13460 2573211 .. 2573258 - -13.1  -2.65068   TAACACACTCAGAAT GCGCT-AAAGGAGCTCGAAACAA TAAA TTGTTCC-AGCTCCTTTAAGCAC CGATGTCTTATTTAT 100 33
SAHC1340_RS13455 2571772 .. 2571820 -  -9.8   -4.9934   ATAACATTATAAAAA CAAGAACCCCCATATGTTGA GCTCTCGTT TCAACATACGGGGGTTTTCA TATTGTTGTATTATT 100 36
SAHC1340_RS13430 NONE
        nhaC 2566322 .. 2566336 -  -2.9  -4.36914   TGTTCCGCTACAAAA               CATAT TCAGT ATATG               TATAGAGGATATTTA  57 129
SAHC1340_RS13420 2565821 .. 2565839 -    -6  -3.72231   TTACACAGTGAACAA             TACACCAA AAG CTGGTGCA             ATTATGCAAACATCT  65 210
SAHC1340_RS13410 NONE
SAHC1340_RS13405 NONE
SAHC1340_RS13400 2561371 .. 2561385 -  -4.4  -4.36914   GGCTTGCTCACAAAA               TTTATA AAA TATAAA               AAAAGAAGAGCTTTA  64 120
        sarR 2560525 .. 2560577 -  -6.6  -5.52079   ATATTAAAATAAAAA GACTAG-TGTACCTTGTTTCAAGCTT AAT AAGCT-GAAATAAGGTATGGCTAGTC TTTAACTTTAATTAA  91 153
         yut 2554231 .. 2554273 - -13.9  -4.87665   TTTTATCCATAAAAA TA-CACCTTAAACTATACAA TTCG CTGTATAGTTTAAGGTGATA TTCAAACAATATTAG 100 55
SAHC1340_RS13345 2552738 .. 2552750 -  -4.9  -4.18018   TCCTCCTATTGAAAA                TGATT ATC AATCA                TTCAAAAATTATACA  63 207
SAHC1340_RS13340 2551740 .. 2551786 -  -6.9  -4.87665   TTCTAGCTATAAAAA TAAGAGCCTAATACAATATCAA AAGA TTGATAT-GTTTCAGACTCTCA TTTCACTAACTTATA  83 49
SAHC1340_RS13335 2550390 .. 2550426 -    -4  -2.67694   ACCATTATTATAGCA    CCATTGTAAACTTT AAGAAATGA AAAGTTTACAATAA    GTTGTTCTATATAAA  45 69
SAHC1340_RS13330 NONE
SAHC1340_RS13325 2548883 .. 2548919 - -13.2  -4.85195   AAAACAATTTAAAAA    GCAGTAAGTTGATTTC TACTC GAAACCAGCTTACTGC    TTTTTTATTCTAATA 100 59
        modA NONE
        modB NONE
SAHC1340_RS13305 2545554 .. 2545567 -  -2.4  -4.37971   AAAACATCATTAAAA               TGCT GATAGA AGCA                TTCACTTCTACAATT  55 79
SAHC1340_RS13300 NONE
SAHC1340_RS13295 2543568 .. 2543586 -  -5.3  -2.96933   ACACCAATACCAAAG             GCAATGT ATTGA ACACTGC             TCAAATCGCTGGTAT  54 349
SAHC1340_RS13285 2542100 .. 2542112 -  -3.4  -4.67635   TGTAAAATCATAAAA                GAAG TTCCT CTTC                AGCAGCGTCAGATTC  64 5
        mobB NONE
SAHC1340_RS13275 NONE
        moaD NONE
        mobA NONE
        moaA 2539218 .. 2539244 -  -4.6  -4.22927   GGAGTAAGACAGAAA         TATTAAAACATC TCT AATGATTTAATA         TGTAGTGGTCCCTAC  61 44
        sarV NONE
SAHC1340_RS13225 2535185 .. 2535201 -  -6.7  -2.92522   TCATCTAACACGATA              TTCATTT CTA AAATGAA              CCAACTTGACTTCAA  61 374
        fmhB 2533604 .. 2533638 -  -4.3  -5.41143   TATTGTGTAAAAAAA     TCTGAACGCAAATGA CAGTC TTATGAGCGTTCAGA     TTTCAGTCGTTAATC  78 40
SAHC1340_RS13210 2530320 .. 2530357 - -12.2  -4.70879   TTCAAATTTTAAAAA   GCCATAAAAGTAGTCA ATATCA TGACCGCTTTTATGGC    TTTTATATTATCTAT 100 37
SAHC1340_RS13195 2528316 .. 2528370 - -12.5  -3.91032   CAACTATGTCATAAA TAAAAGCCCCCTTT-TCACAATATAC ATTT ACATATTGTGGTAAAGGGGGCTCTCA TTTTCTACGAATACT 100 70
SAHC1340_RS13190 2528043 .. 2528067 -  -3.7  -4.10429   AATCACTTCTGAAAA          TAACCATTC ACTTATA GAATGATTA          AAATTAATTTTCGGG  57 71
SAHC1340_RS13175 NONE
SAHC1340_RS13170 2523702 .. 2523712 -  -5.4  -3.29781   AAACAATACCAAAAG                 CGAA CTT TTCG                 TTTTTCTGATTCAAC  56 56
SAHC1340_RS13165 2522257 .. 2522279 - -12.8  -5.95539   CTTCAAAGAAAAAAA           CGACTACCAA TCA TTGGCAGTCG           TTTTTTGTGTCTGGA 100 42
        rpsJ NONE
        rplC 2520321 .. 2520337 -  -3.8  -2.81289   CTAATTTTAAAACAT              CATAAT TAGCC ATTATG              CATTTCCTCCTTTCA  46 48
        rplD NONE
        rplW NONE
        rplB NONE
        rpsS NONE
        rplV NONE
        rpsC NONE
        rplP NONE
        rpmC NONE
        rpsQ NONE
        rplN NONE
        rplX 2515464 .. 2515474 -  -2.4   -3.5936   TTTAAACGGTTCAAA                 GTGG GAT CCTC                 CTTTCAACTTGTTAT  47 40
        rplE NONE
SAHC1340_RS13085 NONE
        rpsH 2514251 .. 2514261 -  -3.2  -3.14881   TAATTTTCTTACCAA                 CACG ACT CATG                 TTATGGCACCTCCTT  46 49
        rplF NONE
        rplR NONE
        rpsE NONE
        rpmD NONE
        rplO NONE
        secY NONE
SAHC1340_RS13045 2510157 .. 2510167 -    -4  -3.09878   CTCATCTATCTAATA                 TGAT TAA ATCA                 TGCCTCACTTAAAAT  48 62
        infA NONE
        rpmJ NONE
        rpsM NONE
        rpsK NONE
SAHC1340_RS13020 NONE
        rplQ 2507237 .. 2507270 - -11.9  -4.73432   GTAAATATAAAGAAA     TCGGACTTAAAAACA TTTC TGTTCATAAGTCCGA      TATTTTATTCAATAA 100 198
SAHC1340_RS13010 NONE
SAHC1340_RS13005 NONE
SAHC1340_RS13000 NONE
        truA 2503422 .. 2503435 -  -2.4  -3.61465   TCCTAAAAAATAAAT               GCTT CTATTC AAGC                TATAAACAGTTTCAT  47 225
        rplM 2502962 .. 2502976 -  -3.5  -3.33696   CCTCCTTCTAATTAA               CCACG TAATT CGTAG               TTTTCTGGTTGTTGT  49 7
        rpsI 2502501 .. 2502523 - -12.8  -5.63857   AAAAACGCAAAAAAA           CACCTCGACA TAA TATCGAGGTG           TTTTGTATATATCGT 100 48
SAHC1340_RS12975 2500886 .. 2500901 -  -4.6  -3.09327   TTACTGTATCCAACA              CGCCCT TTTT AGGGTG               CTTCATTTTTCAACT  50 28
SAHC1340_RS12970 2500553 .. 2500570 -  -2.7  -2.75825   TCTGTAATAAATCCA             TTGCTGA TAGT TCATCAA              AATAAATTATTTTTT  40 69
SAHC1340_RS12965 NONE
SAHC1340_RS12960 2498567 .. 2498577 -  -2.6    -3.322   ACCTTTATATATTAA                 TTAA ATT TTAA                 AATTATTAAACTCTT  43 121
SAHC1340_RS12955 2496863 .. 2496885 - -10.6  -5.59564   ACAAACGCAAAAAAA           CACCTCGACA TAA CATCGAGGTG           TTTTGTATATATATC 100 341
SAHC1340_RS12950 2496352 .. 2496381 -  -5.7  -5.04597   ATGGAGATATAAAAA       GCCACAGCAAGAC TTAG ATCTAACTGTGAC        TTATACATTTCATAC  79 47
        alsS NONE
        budA 2493373 .. 2493409 - -16.9  -3.17901   ATATCTGGAACCTAA    TAAATCCCCTCACTACT GCT AATAGTGAAGGGATTTA    TTTTATTACTTAGAC 100 160
SAHC1340_RS12925 NONE
SAHC1340_RS12920 2490526 .. 2490568 - -13.8  -3.65446   TAACTAAATAAGCAA GAAAATCTCGACACTATA CCATTTT TATAGTGTCGAGATTTTA TAAGTATCGCCATCA 100 38
SAHC1340_RS12905 2487242 .. 2487261 -  -2.8  -3.96624   TATGTCCACTATAAA            CCATGGAG CGAA CTCTATAG             CAAGCCATAGGTTTA  51 38
SAHC1340_RS12900 2486281 .. 2486320 -  -9.5  -5.27779   TTTAAGAGTAAAAAA  TAACCTGAAACATAGAC TTTAAC ATCCAAGTTTCAGGTTA   GTGTAATGTAAATGA 100 61
SAHC1340_RS12895 2485842 .. 2485852 -  -3.2  -3.95725   AACTTCCAATAAGAA                 CCAC CAT GTGA                 TTGCCCTTTATTTTT  53 184
SAHC1340_RS12890 2484865 .. 2484890 - -10.5  -4.68994   ATCAGTATGTAAAAA         GCATTTCCCGA ATGG TAGGGAAATGC          TTTTAATTTTGGAGT 100 276
SAHC1340_RS12875 2483035 .. 2483072 - -11.5  -4.25873   TTTGCATAAAAAATA   GCCCATAAATGAATGCA AATT CACATTCACTTATGAGC    ATATAGATACATATT  95 66
        lacA NONE
        lacB NONE
        lacC NONE
        lacD NONE
SAHC1340_RS12850 NONE
SAHC1340_RS12845 NONE
        lacG 2476334 .. 2476360 -  -7.3  -4.55295   CTTTCTATAAATAAA         GACCTACCAGC ACTCG ACTGATAGGCC         TTTTAATATCTATAA  78 41
SAHC1340_RS12835 2475209 .. 2475229 -  -3.3  -3.52073   GCTCTAATATTACAA            GCTTTTTTG CCC CAGAAAAAC            TAGCAGTTGCTTTAT  50 37
SAHC1340_RS12830 2473935 .. 2473946 -    -3  -2.78354   CAATTAACAAAGTTA                GTTT GTTA AAAC                 GTATACTTTATTATT  43 36
SAHC1340_RS12825 2472676 .. 2472708 -  -9.3  -4.78477   AGACACAAAAAATAA     GTCGCCT-ATACAG TATTTT CTGCATAAGGCGAC      TTTACTTACTAATCT 100 39
SAHC1340_RS12820 2470717 .. 2470729 -  -4.9  -4.75776   AAGTTAATTTAAAAA                CATAT TAA ATATG                TACCCATCAGTTTTT  70 149
        amaP NONE
SAHC1340_RS12810 NONE
SAHC1340_RS12805 2469232 .. 2469265 - -14.9  -5.60864   TACATATCAAAAAAA     GCTGATTTCTATCAA ATAA TTAATAGAAATCAGC      TTTTTTACATTGCCT 100 78
        sfaA NONE
        sfaB NONE
        sfaC 2460879 .. 2460891 -  -4.9  -2.92094   CCTTAGACAAAATAC                TGATA ATG TATCA                TTGCTATATCATCTT  51 244
SAHC1340_RS12760 NONE
SAHC1340_RS12755 NONE
SAHC1340_RS12750 2457668 .. 2457700 -  -7.2  -5.17576   GATGAATTCAAAAAA      GGTTAAGTACAA TTACTGATT TCGTACTTAACC      TTTTTTAAACTCTAA  86 52
SAHC1340_RS12745 2456004 .. 2456031 -  -5.6  -5.63504   AATTGTATAAAAAAA        TCATTCATGGTG AGGG CTTCATGAATGA         TTTTTTTAATTGATT  90 115
SAHC1340_RS12735 NONE
SAHC1340_RS12730 NONE
SAHC1340_RS12725 2453075 .. 2453087 -  -3.3   -5.8187   TATGTAATAAAAAAA                GCGGA GTT TCCCC                CAGCTTTTCTAAACG  84 42
SAHC1340_RS12720 NONE
        sepA 2450975 .. 2451005 -  -7.7  -5.10461   TCTATTGAACAAAAA      GAAGTTG-GAACAC ATAT GTGCCCTCAACTTC       AGATATCTATTTTCT  89 32
        lmrS 2449204 .. 2449237 -  -7.6  -5.99154   TATTAAATAAAAAAA     GCAGTTAGCCTATT ATTTTA AATAGACCAACTAC      TATAATTATTTTAAA 100 36
SAHC1340_RS12705 2447992 .. 2448018 -  -9.6  -5.16206   AAATCAACATAAAAA         CGTACAAAATAA AAG TAATTTTGTACG         TTTAGCATATATTAT 100 43
SAHC1340_RS12700 NONE
SAHC1340_RS12695 2445939 .. 2445963 -  -8.8  -4.26777   TTTAACCAAAAAATA          TTTGAATGTT AAATA AACATTCAAA          ACTGAATACAATATG  83 90
SAHC1340_RS12690 2442489 .. 2442509 -    -7  -3.02947   TAGTCACCAGACATA            TGAATGTA ATTTA TACATTCA            AAACTAGATAGTAAG  65 73
         rrf NONE
SAHC1340_RS12680 2442278 .. 2442291 -  -8.1  -3.14881   TAACCGCTTGACCAA               GGAGC CATG GCTCC                ACAGGTAGGACTCGA  71 19
SAHC1340_RS12675 2442213 .. 2442228 -  -3.2  -3.10175   ATTCTCCAAAATAAT              GACTCC TACG GGACTC               GAACCCGTGTTACCG  44 6
SAHC1340_RS12670 NONE
SAHC1340_RS12665 NONE
SAHC1340_RS12660 NONE
SAHC1340_RS12655 2441826 .. 2441849 - -11.8  -5.87688   AGAACCTAAAAAAAA          GCACTTCCCA AAAA TGGAAAGTGC           AAGTAGTGAGCCATA 100 30
        rocF 2439243 .. 2439277 -  -7.3  -5.64006   AGTGAATTAAAAAAA     GTAGTGCAAAAAGCA AAATA TACTTTATACACTAC     AAATCATTTATTTAT 100 37
SAHC1340_RS12635 NONE
SAHC1340_RS12630 NONE
SAHC1340_RS12625 2435938 .. 2435955 - -11.3  -5.59879   TACAAACACAAAAAA             CCGATGC ATAC GCATCGG              CTCATTTGTAATACA 100 45
SAHC1340_RS12620 2428054 .. 2428102 -  -8.6  -5.47159   TCTGAACATAAAAAA TACTCCCTTCA-ACATAGACAC TTAACTT GTGT-TATGTATGAAAGGAGTA TTTTTGCGTTAATAA 100 185
        glmS 2420123 .. 2420155 -   -10  -5.09225   AGTCGACCTAAAAAA      GCACCCTTCTAG TCGATTAAT CTAAAAGGGTGC      CATATACTTTAATTT 100 70
SAHC1340_RS12590 NONE
SAHC1340_RS12585 2418156 .. 2418210 - -12.7  -2.86828   AAATATTTATAAGCA TACAAAAGAGCAGT-AAGACATTTTCT AAT AGAAAATAACTTTACTGCTC-TTTGTA CATTACTCATCAACT 100 76
SAHC1340_RS12575 2415592 .. 2415604 -  -4.7  -3.53444   TTATTCTCTGGTAAA                GAGGG GCG CCCGC                TTTTTCGGCCTCTCG  57 460
SAHC1340_RS12565 2414752 .. 2414789 - -15.7  -2.66372   CAACCAAAATAAATT   TTAGAGCCCCTTACAAC TTTA GTTGTTAGGGGCTCTTA    TGCATGCGCTTAGCG 100 484
SAHC1340_RS12545 2411225 .. 2411246 -  -6.6  -4.62085   ATTTTCAAAAAATAA           CGAGTTAC GAAAAA GTAACCCG            CTTCAAATCATATTT  76 51
SAHC1340_RS12540 NONE
SAHC1340_RS12535 2409517 .. 2409544 -  -3.4  -5.25906   ATAAACCAACAAAAA        CCCCCTCAC-TAC TAT GCAAGTGAGAGGT        TATGTTGATGTACTT  72 119
SAHC1340_RS12530 2407456 .. 2407504 -  -6.8  -5.50723   TTATTAAAATAAAAA CGAGTAATCTATCATAAGCTCT TAATT AGCTCTTATGGTTGATTACCCG TCATTTTTTCTTTAT  91 114
SAHC1340_RS12525 2406571 .. 2406587 -  -5.3  -3.25823   GCTTGTTTATATTAA              TTATTAT ATT ATAATAA              TTCTAATCTGTAAAG  56 160
SAHC1340_RS12520 2406011 .. 2406049 -  -6.8  -4.82855   GATTAAACTCAAAAA  GCCAACACAT-TCTGGG CGTATC CCCATTTATGTGTTGGC   TTTTATTTATATTAT  83 55
        deoC 2404016 .. 2404029 -  -2.4  -4.56597   TCCTTTTCTTAAAAA               GCTT AGGACA AAGC                ATCTGCGCTTTCTCT  58 267
SAHC1340_RS12500 NONE
SAHC1340_RS12495 2402272 .. 2402311 -  -7.3  -5.22039   TTCAAAGTCAAAAAA  TCGAACAAATGAAAAAG TAAAAT CTTTAACATTTGTCCGA   TTTATTTGAGAACCA  91 41
SAHC1340_RS12485 NONE
SAHC1340_RS12480 2398844 .. 2398880 -  -8.1  -4.71426   CCTTTATCAACAAAA    TGGCAACTCTTATAACA TAG TGAAATAAAAGTCGCCA    TTTAATATTAGTATT  87 162
SAHC1340_RS12475 2397823 .. 2397869 -  -5.5  -5.38398   AGAAAAATAGAAAAA GACCATTTATAT-GCGCGTTGTT TTA AATAA-ACGCTATATAAATGGCC TTTTATTTTATGGTC  82 103
SAHC1340_RS12460 2395628 .. 2395640 -  -3.4  -3.03124   TTTCATTGCCCAATA                CTTC CTTTC GAAG                GATATAATCTAAATT  46 115
SAHC1340_RS12455 2394976 .. 2395007 - -12.4  -6.01187   AATTAAATAAAAAAA      CGCTCCCTCTCACAA ATT CTGTAAG-GGGAGCG      TATAAATTTTATACA 100 106
SAHC1340_RS12450 2393093 .. 2393127 - -18.8  -4.85177   AAATTATACGAAAAA     CCGGTACTTTCAATGT TTA ACAATGAAAGTACCGG     TTTTATTAGCAAATT 100 40
SAHC1340_RS12440 2391357 .. 2391382 -  -8.4  -5.40625   ATACGACATAAAAAA         GAAGCAAACA CCATTT TGTCTGCTTC          TTTTAAAATTAATAT 100 77
SAHC1340_RS12435 2389677 .. 2389691 -  -5.8   -2.7185   ACCATTTTTTAATCA               GTATAA TTA TTATAC               CACAAAACAAGATAA  55 43
SAHC1340_RS12430 2389206 .. 2389254 -  -9.8  -5.27938   ATTTTTAAATAAAAA TAACTATTCCCACATCATCGCA AATAA TGCGAAGACTTAGAAATAGTTA TAATCAATGCTATGT 100 56
SAHC1340_RS12425 2387550 .. 2387592 - -12.3  -3.17713   TAAAAATTGCAAAAT TAAAACAGTACACAAAACT TAATT AGTCATGTGCACTGTTTTA TTGCGATTTTTAATT  95 53
         rho 2385967 .. 2385977 -  -5.4  -2.70932   CTTTGCCCTGAACCA                 TCTG GAA CAGA                 GTTATTTGTGAGTTT  52 105
SAHC1340_RS12415 2385636 .. 2385669 -  -6.1  -5.72622   CTTATAAATAAAAAA     GCTGTCTACAATTCCA TTA TAGGA-TGCAGACAGC     TTAACGATTACTATA  95 41
SAHC1340_RS12410 NONE
        prfA NONE
        prmC 2382798 .. 2382832 -  -3.7  -5.08367   AATATAAAGCAAAAA    GCTATGCACTTAACTA ATCA TAGCAAAG-GCATAAC     TTCTAATTACCATTT  69 32
SAHC1340_RS12395 NONE
SAHC1340_RS12390 2381216 .. 2381240 - -10.1  -5.93252   CCTAAAAATAAAAAA          GGAATATAGCA AAG TGCTACACTCC          TCTATTATAACTTAT 100 78
SAHC1340_RS12385 NONE
SAHC1340_RS12380 NONE
         upp NONE
        wecB 2377568 .. 2377582 -  -4.3  -2.76708   CAATTTAGACACAAT               TAGAC AAAAA GTCTA               TTTTCCTCAGAAATC  48 32
SAHC1340_RS12365 NONE
        atpB NONE
        atpE NONE
SAHC1340_RS12350 NONE
SAHC1340_RS12345 NONE
SAHC1340_RS12340 NONE
SAHC1340_RS12335 NONE
        atpD NONE
SAHC1340_RS12325 2370482 .. 2370513 - -18.2  -5.20154   ATATAATTCAAAAAA      GGGTCGAAGATATG AAAT CACATCTTCGACCC       TTTATTTACTATTTT 100 34
SAHC1340_RS12320 NONE
SAHC1340_RS12315 NONE
        murA 2368351 .. 2368361 -  -2.6  -3.10409   TATTAATTTACTGAA                 TTAA TCG TTAA                 TACGTTCAATGTCTG  42 15
        fabZ 2367829 .. 2367866 -  -3.8  -5.83211   GAGTAAAATAAAAAA  CATTCAAAGA-TT-ATGC CAAC ACATTAAATCTTTGAATG   TTTTTTTGTTTTATT  84 36
SAHC1340_RS12295 2366667 .. 2366699 -  -7.1  -4.13652   AACTACACAAAAAGA      CGACCTACACAAC AGTACTA GTCATGTAAGTCG      TTTTTAAGTGAGTAT  75 116
        sceD 2365625 .. 2365659 -  -9.4  -5.95539   TGCGAAATAAAAAAA     CCGGAACATATCGAGA ATT CCCCGATATATTCCAA     TCTAAAAGTTACTTA 100 72
        tenA NONE
        thiD NONE
        thiM NONE
SAHC1340_RS12270 NONE
        yidC 2361363 .. 2361415 - -14.6  -4.75174   TATTGAAGCGAAAAA TAATGTGCGCCCTATAAAGTTAAAA TTAT CTTCAACTTT-TAGGGTGCACATTA TTTGGACTTGCTAAG 100 42
        csoR NONE
SAHC1340_RS12235 2357786 .. 2357797 -    -3  -4.17657   CATTATACCCTAAAA                TACA ATTT TGTA                 TCCTTCATCATAGAT  55 8
SAHC1340_RS12230 2357456 .. 2357482 - -12.4  -5.10497   AATCCAGTCAAAAAA         GCTATCATCGAA TAG TCCGACGATAGC         TTTAACGGTGTGTGA 100 58
SAHC1340_RS12220 NONE
SAHC1340_RS12215 2353191 .. 2353220 -  -5.1  -5.71295   ACATAAAAAGAAAAA       GGCAATTTTGTAT TTAC ACACAAAACCACC        TCTTCTTTGTAATCT  83 93
SAHC1340_RS12210 2350895 .. 2350929 -  -5.7  -5.72053   TAATTAAATAAAAAA     GATCGCTGCCATTAA ACGAA TGATTGGCAGTGATC     TTTTTTATATTCAAC  90 347
        kdpF NONE
        kdpA NONE
        kdpB NONE
SAHC1340_RS12180 2342912 .. 2342943 -  -4.6  -4.62471   TTGAATTGCTAAAAA      GACACCATGTATAAT TTT ATCA-ACATGATGCC      TTTCATCTATAATCA  66 38
SAHC1340_RS12175 NONE
SAHC1340_RS12170 NONE
SAHC1340_RS12165 2340200 .. 2340214 -  -2.8  -2.58236   TAAATCTACACCAAT               TCCATG TAT CATTGA               TTATTCCTCATTTTT  40 26
SAHC1340_RS12160 NONE
         alr 2338580 .. 2338602 -  -2.1  -4.15453   CAATTGATTCCAAAA           GTTATTAAA TGACC TTTAATTAC           TCTAATGATAACAAA  52 61
        mazE 2338386 .. 2338398 -    -2  -2.70932   CTCCTCGTCTAATCA                TTCA TTCGT TGAA                TTAGAAGATAAATAT  39 10
SAHC1340_RS12145 2337819 .. 2337840 -  -5.3  -5.53288   TTTAAGCTAAAAAAA           CTTTAGG-AT GGA ATACCTAAAG           CCTAAAAAACTTAAG  82 209
SAHC1340_RS12135 NONE
SAHC1340_RS12130 NONE
        rsbW NONE
        sigB 2334923 .. 2334956 -  -5.5  -5.04222   TAATTAAATTAAAAA     TACCCCTCGATT-TCA ATT TAATAATCAAGGGATA     ATTATATGGATTTTT  77 72
SAHC1340_RS12115 NONE
SAHC1340_RS12110 2331789 .. 2331826 -  -7.8  -4.59069   ATCATAAGTAGAAAA   GCCGAGATTG-CGAAGT ATTAA ATTACGACAATCTCGGC   TTTAAACATTTTATA  80 170
SAHC1340_RS12105 NONE
SAHC1340_RS12100 NONE
SAHC1340_RS12095 2328064 .. 2328076 -  -2.7  -2.87769   ATCGACTAAAGAGTA                CCAAT CTA ATTGA                ACGACTGAATCAAGA  42 306
SAHC1340_RS12085 NONE
SAHC1340_RS12080 NONE
SAHC1340_RS12075 2324812 .. 2324836 -  -8.8  -4.26777   TTTAACCAAAAAATA          TTTGAATGTT AAATA AACATTCAAA          ACTGAATACAATATG  83 90
SAHC1340_RS12070 2321543 .. 2321563 -    -7  -3.02947   TAGTCACCAGACATA            TGAATGTA AATTA TACATTCA            AAACTAGATAGTAAG  65 73
         rrf 2321382 .. 2321397 -    -9  -5.76633   TTAGACATAAAAAAA              GAGACC TTGC GGTCTC               AATGCGGCTCATCGC 100 52
SAHC1340_RS12010 2308574 .. 2308602 -    -6  -5.26875   TTTTGAACCAAAAAA        TCGAAGGCACCC GTGAA AGATGTCTTCGA        TTTTTGTTTTTTTTG  84 65
        tsaE NONE
        tsaB NONE
        rimI NONE
        tsaD 2305243 .. 2305254 -    -3   -4.8048   TTTTTACATGAAAAA                TCTA ACTT TAGA                 GTTATTGCAGCAACA  65 346
SAHC1340_RS11975 2303512 .. 2303546 -  -8.1  -3.37205   CTATAAAAATATACA     TAACTCTAACTGTAA AATCG CTATAGTTAGAGTTA     TTTTTTTACAAATTT  73 125
SAHC1340_RS11965 2300604 .. 2300628 -  -5.7  -5.18995   AACATAACAGAAAAA          GCCTGAGAC ATACTTA GTCCCAGAC          TGTTCTATAATTAAT  84 83
SAHC1340_RS11960 NONE
SAHC1340_RS11955 2298991 .. 2299015 -  -2.4  -3.26717   AGCCATAGAATCTAA         TATCTATTTTA TTGT TAAAAT-GATA          ACGTTAAACTTTTTG  43 29
SAHC1340_RS11950 2297502 .. 2297537 -  -5.6  -4.77165   TTTTGTATAACAAAA    TGTCCCAACA-TCAACC TTT AGTTAAATGTCAGGACA    ATGAATATTCTATGT  75 50
SAHC1340_RS11945 NONE
SAHC1340_RS11940 NONE
SAHC1340_RS11935 2293514 .. 2293534 -  -4.1   -3.6715   TTATTCAATTGTAAA            TCTTGTT GGATTTT AACAAGA            TAACTAGCAAATGCA  52 331
SAHC1340_RS11905 2289998 .. 2290026 -  -7.4  -5.31275   CTTCATTACAAAAAA        GGCCGCGAGC TTGGGAGGG GCTCACGACC        ATACTTATTATTAAG  91 344
SAHC1340_RS11890 2286505 .. 2286538 -  -5.5  -6.17268   CCATAATAAAAAAAA    CGAATCACA-C-ACG GATTAT CGTCGCTGTGATTCG     TTTTTATTTTTCTTT 100 7
       groES NONE
        groL 2283462 .. 2283500 -  -4.5  -5.38951   AATTCATACAAAAAA   GACGCCTCCCATAAGTT TAGTC ACCAAATGGAAGACGTC   TCGTAATTAAAATAT  78 126
SAHC1340_RS11865 NONE
SAHC1340_RS11860 2281790 .. 2281800 -  -2.6  -4.40311   ATAAACAACCCAAAA                 TTTA AAA TAAA                 TGATATAGTAATAGC  55 325
SAHC1340_RS11855 2281260 .. 2281294 -  -5.9  -3.92746   CCCACCCTAAAAATA     TTATGTACCTATTGT TACAT ACAATAGATACGCAA     AATCATTTCTCACTG  65 136
SAHC1340_RS11850 2280537 .. 2280548 -    -3  -3.57387   AATACACGCTTTAAA                GATT ATTA AATC                 AGCGTTTTAATTTTT  49 274
SAHC1340_RS11840 NONE
SAHC1340_RS11835 2276601 .. 2276634 - -12.7  -5.08169   ATACATTTGAAAAAA     GCTGATTTCTATCAA ATAA TTTATAGAAATCAGC      TTTTTTACATTGTCT 100 47
        lukH NONE
        lukG 2272488 .. 2272528 - -18.7  -4.35044   CTATTCAAATATAAA  TAAAAGTTACCTACTACAT TCT ATGTAGCAGGCAACTTTTA  TTACTTATTTCTTTT 100 30
SAHC1340_RS11785 NONE
SAHC1340_RS11780 2267093 .. 2267109 -    -3  -4.35747   TAAAAATAAAGTAAA              TGAACA AAAAA CGTTCA              AACCTATACGATATA  60 345
SAHC1340_RS11770 NONE
SAHC1340_RS11765 NONE
SAHC1340_RS11760 2265324 .. 2265340 -  -5.9  -2.82516   GGTTTGATGATGAGA              TTGTACT TCA AGCACAA              CAGACCATTAGAGAT  56 358
SAHC1340_RS11750 NONE
SAHC1340_RS11745 NONE
SAHC1340_RS11740 NONE
SAHC1340_RS11735 NONE
SAHC1340_RS11730 NONE
         ssb NONE
SAHC1340_RS11720 2261823 .. 2261836 -  -3.9  -2.92265   ATTTACAGATAATGA               TTTCA ATTT TGAAA                ATCCAGTCAATAAGT  46 362
SAHC1340_RS11710 NONE
SAHC1340_RS11705 NONE
SAHC1340_RS16915 NONE
SAHC1340_RS11690 NONE
SAHC1340_RS11685 NONE
SAHC1340_RS11680 NONE
SAHC1340_RS11670 NONE
SAHC1340_RS11665 NONE
SAHC1340_RS11660 NONE
SAHC1340_RS11655 NONE
SAHC1340_RS11650 NONE
SAHC1340_RS11645 NONE
SAHC1340_RS11640 NONE
SAHC1340_RS11635 NONE
SAHC1340_RS11630 NONE
SAHC1340_RS11625 NONE
SAHC1340_RS11620 2254139 .. 2254161 - -10.6  -5.38054   CCTCATAAATAAAAA           GACACATCAC ATA GTGATGCGCC           TCTTGTTCATGCGTT 100 127
SAHC1340_RS11615 NONE
SAHC1340_RS11610 NONE
SAHC1340_RS11605 NONE
SAHC1340_RS11600 NONE
SAHC1340_RS11595 NONE
SAHC1340_RS11590 NONE
SAHC1340_RS11585 NONE
SAHC1340_RS11580 NONE
SAHC1340_RS11575 NONE
SAHC1340_RS11570 NONE
SAHC1340_RS11565 NONE
SAHC1340_RS11560 2246095 .. 2246125 -  -6.8   -3.2614   TATCTGGTATATTAA       CCGACTTTACCGCA GTT TCCGATGAAGCCGG       TTTCGTTACAAAGTT  63 31
SAHC1340_RS16415 2245849 .. 2245864 - -10.4  -4.05678   TTTTCAAATAAAATA              GAGGGG TTGC CCCCTC               TTATGCTTCTACATT  91 26
SAHC1340_RS11555 2245254 .. 2245279 - -11.3  -5.51165   AAAAGTTCAAAAAAA         TAACCCTAACC AAAC GGTTAAGGTTA          AAATGCATCAATTAA 100 211
SAHC1340_RS11550 NONE
SAHC1340_RS11545 NONE
SAHC1340_RS11540 NONE
SAHC1340_RS11535 2235257 .. 2235283 -  -8.8  -4.03995   TTTTGTATAAAAATA         GTGCTAAGGA TTACTCT TCCTCAGCAC         ATTGTTGATTTTCTT  80 9
SAHC1340_RS11530 2234909 .. 2234927 -  -6.1  -2.94745   TAAAAGAATAAAGAT             TATGAGT ATCTA ACTCATA             GCTTTTCATACTGTT  58 31
SAHC1340_RS11525 2234476 .. 2234495 -  -8.6  -5.52807   AACAATAAATAAAAA            GTCAGTAC CGAA GCACTGAC             TAAAACTTATTTACA 100 109
SAHC1340_RS16410 2234135 .. 2234160 - -10.5  -5.07275   TTATATATAGAAAAA         GGGCAACATGC GCAA ACATGTTACCC          TAATGAGCCCGTTAA 100 118
SAHC1340_RS11520 NONE
SAHC1340_RS11515 2232946 .. 2232960 -  -2.2  -4.99972   AGAAAATATTAAAAA               TCAATA AAA TATTAA               AAGAAACTAAAATTA  62 85
         sak 2232141 .. 2232166 - -12.7  -5.84432   TATAACATAAAAAAA         TAGGCAAGTAC CGAA GTACCTGCCTA          AAAAAGGATTATCCA 100 197
         scn 2229754 .. 2229773 -  -6.4  -4.07568   TTTTTTGGTTCAAAA            GGGACTAA TGGG TCAGCCCC             TTTTTAATATTTACT  70 29
         eap 2224074 .. 2224097 -   -11  -4.39571   TCTACAAATGTAAAA          GGCACCCCAC GATT GTGAGATGCC           TTATTATAAAATTAA  95 345
SAHC1340_RS11450 2222158 .. 2222192 - -16.6  -2.89981   CAGAATTATACTACA     CAACCCCAAGTCTGGT ACC AGCAGACTTGGGGTTA     TTTATGTGTGTAGGA 100 41
SAHC1340_RS11445 NONE
SAHC1340_RS11440 NONE
        pmtA NONE
        pmtB NONE
        pmtC NONE
        pmtD 2217914 .. 2217952 - -12.7  -4.37544   TTACAATAAGACAAA   CTTTGAGGTTGGGAA AATTTAAAA TTCCCAACCTCAAAA   TTATTTTTATTAAAT 100 35
SAHC1340_RS11410 2216673 .. 2216687 -  -3.6  -3.28791   ATTCGTTTTTTATAA               CTTTAA GAC CTAAAG               CTATTTACTAAAAAA  47 26
SAHC1340_RS11405 NONE
SAHC1340_RS11400 2215180 .. 2215217 - -11.6  -4.43668   CCAACAAATAAATAA   CACCGATATTAGAGAAA TTATG CTTC-CTAATATCGGTG   CTTACATCCTTTATT  95 40
SAHC1340_RS11390 2213426 .. 2213481 - -13.1  -3.91032   GAAGTATTGTATAAA TAGAGAACAGCAGTAAGAT-ATTTTC TAATT GAAAATTATCTTACTGCTGTTTTTTA GGGATTTATGTCCCA 100 55
SAHC1340_RS11380 2211116 .. 2211138 -    -5  -4.56775   AGCTTTCTTTAAAAA           TTAATTTTTG AGA CAAAAATAAA           CCATGCTTCCATAAT  68 126
SAHC1340_RS11370 2209364 .. 2209404 -  -7.3  -3.37344   GTTGTATTTAACTAA CAGTTCATT-AAAGTAGAA TTTAT TTC-ACTTTCAATGAACTG TTTTTTATTTACGTT  67 136
SAHC1340_RS11355 2206201 .. 2206221 -  -2.5  -2.79004   TTACCGTCAAAATAC            CCCTTTTAT CAG ATAATTGGG            TTTATTATAGCATAT  41 111
SAHC1340_RS11350 2204391 .. 2204430 - -10.2  -4.08474   TAAATAAAATAAAGA  GTCAACCAAGGATTAA AATAGGAA TCCATCCTTGGTTGAC   TTTCTTTTGTTTGTA  93 135
SAHC1340_RS11330 NONE
        nadE 2199792 .. 2199804 -  -3.5  -2.60423   ACCTTAATGAATGCA                TATTA ATA TAATA                TAGTACGAAAACTCT  44 214
SAHC1340_RS11320 NONE
SAHC1340_RS11315 2198890 .. 2198927 -  -9.3  -3.89305   ATGTATAAACAAATA   GGCTATTCAAAGTAAAA TTAC TCAAACTTTGAATAGCC    TTTCCTCTTCAAATA  87 64
        purB NONE
SAHC1340_RS11295 2194528 .. 2194568 -  -8.6  -5.00616   TTTTTCGTGAAAAAA  CAATGATTATCTACCT TATTAGTGC AGATAGATAACCATTG  TTTATCGTTCATTTA  95 41
SAHC1340_RS11290 NONE
        pcrA NONE
        ligA NONE
SAHC1340_RS11275 2188249 .. 2188288 - -11.7  -5.09521   TTAACAAATTAAAAA  GGTACTAATGTTAATCA AAATTA TGACTAACATTGGTACC   TTTTTATTATCTTTA 100 49
        gatC NONE
        gatA NONE
        gatB 2183045 .. 2183084 - -11.7  -4.17296   TTCTATAGATATAAA  TAAACCCTCGATTGC ATCTAAGTCA GCAATCAAGGGTTTA   TTTTTTAAATCTTCA 100 58
SAHC1340_RS11250 2182640 .. 2182652 -  -7.7   -5.1925   CTAGAATTGAAAAAA                GCTTG TTA CAAGC                GTATTTTCTTTCAGT  91 304
SAHC1340_RS11245 2181341 .. 2181375 -  -7.3  -3.67622   TACCTCCAAAATGAA    CAGGTTAGGAA-CAAA ATTA TGCGCTTCCTAACCTG     CCATTATATATTTCA  69 51
        rlmD NONE
SAHC1340_RS11235 2179156 .. 2179168 -  -3.4  -2.84587   TGTTATAAAATCAAT                TGCT ATTTA AGCA                TGATGATGAAGACGA  45 116
        dinB 2177684 .. 2177696 -  -4.1  -4.11751   ATCAACTTGCTAAAA                GAACC GTT GATTC                GTATCGATACGGTTT  62 271
SAHC1340_RS11220 2176663 .. 2176674 -    -3  -4.77036   TTTCAGCACCAAAAA                TTGA CTTT TCAA                 GCATACTAGAAACTT  65 364
        murT NONE
SAHC1340_RS11205 2173979 .. 2174018 - -11.6  -5.89921   ACTAGAACAAAAAAA  CACACATCAATTTGGTTG TTTC CATCCAAAATAATGTGTG   TGTTTATACATATAT 100 100
SAHC1340_RS11200 NONE
SAHC1340_RS11195 2173236 .. 2173248 -  -7.7   -5.1925   CTAGAATTGAAAAAA                GCTTG TTA CAAGC                GCATTTTCGTTCGGT  91 232
         map 2170736 .. 2170771 -  -9.8  -4.51097   TTAATTATTATAAAA    CAGTTCCGAAACCAAT ATGA ATAGGCTCCGGAACTA     AATGATGTTCATACT  93 62
SAHC1340_RS11180 NONE
SAHC1340_RS11175 NONE
SAHC1340_RS11170 NONE
        vraR 2167716 .. 2167773 - -23.4  -4.18668   TTAAAAAAGACTAAA CACCAACAAAACAGAGGTTTTCGCTAAT GATT ATT-GCGAAAACCTCTGTTTT-TTGGTG TCTATTTGATGTTAT 100 82
SAHC1340_RS11145 NONE
SAHC1340_RS11140 NONE
SAHC1340_RS11135 2162529 .. 2162542 -  -3.9  -4.20148   AGCACCTCAAAATAA               CATTT ATTA AAATG                TTGATGCCCAATTTC  58 18
SAHC1340_RS11130 2161669 .. 2161704 -  -3.4   -2.7563   AAAAACTCTTAATTA    TGCGGAGAAGCACTT TATCGAT AAGTAGT-CTCCGCA    TATTTTAATGCTATT  44 236
SAHC1340_RS11120 2160076 .. 2160086 -  -6.8  -3.69405   TATAAAAAATATTAA                 GCGA CTG TCGC                 GATATCTAACCCTAA  66 58
SAHC1340_RS11115 2159344 .. 2159386 -  -9.4   -4.8667   TATATTTTATAAAAA TAAAAGACCATCCCTATTAA ATG CCAATAGAGACGACCTTTTA TTTGTTATTCATTTA 100 112
        sgtB 2158175 .. 2158206 -  -9.6  -5.46657   GATGCTAACAAAAAA      TCACACTATCATCT TTTA AAATGAAAGTGTGA       TTACAAGCAAATCTG 100 142
        recX NONE
SAHC1340_RS11100 NONE
SAHC1340_RS11095 NONE
SAHC1340_RS11090 2154353 .. 2154407 - -10.2  -5.31456   TTAATCTATAAAAAA TGAACAACCGGGCAGAATGAAAATCA AAA CGATTTTTACTCTGTCCGGTTTTTTA ATGTAAAACTATGAA 100 193
        mutY 2151905 .. 2151919 -  -2.9  -3.54447   CATATTTCAGAAATA               GTATT ATATA AATAC               ATATTTTTACGAAAT  49 254
SAHC1340_RS11070 2151274 .. 2151284 -    -4  -4.23794   CTAAGTCAATATAAA                 TGAT TTA ATCA                 GTATTTACACTTTAT  58 45
SAHC1340_RS11065 NONE
SAHC1340_RS11060 2149164 .. 2149202 -    -7  -5.22943   ATTAAATTTAAAAAA  GCAGTAAGATTATTTTC AATTAA GAAAATC-TCTTACTGC   TTTTTCTATGTTATG  91 2
         bcp NONE
SAHC1340_RS11040 NONE
        perR 2144280 .. 2144305 -    -7  -6.02345   TAAGCATAAAAAAAA         GTTAAACAAC TTTCAT GTCGTTTAAC          TTCTTAAATATTACG 100 98
SAHC1340_RS11030 2142079 .. 2142091 -  -6.3  -3.07013   GATGTTCCGAATATA                TCCTT AGA AAGGA                GGTGATCCAGCCGCA  60 20
SAHC1340_RS11025 NONE
SAHC1340_RS11020 2141633 .. 2141645 -  -2.7  -3.31792   CCACCATTTTTATAA                GTCAA ACG TTAAC                ATGAAGTTACGTTCT  43 204
SAHC1340_RS11015 2138620 .. 2138640 -    -7  -3.02947   TAGTCACCAGACATA            TGAATGTA ATTTA TACATTCA            AAACTAGATAGTAAG  65 73
         rrf 2138499 .. 2138509 -  -3.2  -4.18018   TTCTCCGATTTAAAA                 CTGC CTG GCAA                 CGTTCTACTCTAGCG  55 17
SAHC1340_RS11005 2138427 .. 2138439 -  -3.3  -2.83119   AATGGTGGAGAATGA                CGGGT TCG AACCG                CCGACCCTCTGCTTG  45 0
SAHC1340_RS11000 NONE
SAHC1340_RS10995 NONE
SAHC1340_RS10990 NONE
SAHC1340_RS10985 NONE
SAHC1340_RS10980 2137991 .. 2138003 -  -3.3  -3.10597   GTTTTTATTGAAAAT                GGTGC CGA GGACC                GGAATCGAACCGGTA  46 12
SAHC1340_RS10975 NONE
SAHC1340_RS10970 2137824 .. 2137838 -  -4.2  -3.05521   AGTATATCGGGAAGA               CAGGAT TCG AACCTG               CGACCCCTTGGTCCC  48 1
SAHC1340_RS10965 NONE
SAHC1340_RS10960 NONE
SAHC1340_RS10955 NONE
SAHC1340_RS10950 NONE
SAHC1340_RS10945 NONE
SAHC1340_RS10940 NONE
SAHC1340_RS10935 NONE
SAHC1340_RS10930 NONE
SAHC1340_RS10925 NONE
SAHC1340_RS10920 NONE
SAHC1340_RS10915 NONE
SAHC1340_RS10910 NONE
SAHC1340_RS10905 NONE
SAHC1340_RS10900 NONE
SAHC1340_RS10895 NONE
SAHC1340_RS10890 NONE
SAHC1340_RS10885 NONE
SAHC1340_RS16790 2136080 .. 2136093 -  -6.7  -5.64421   ATGGTAAACAAAAAA               CTTCC CTTT GGAAG                CAATTATGGAGCGGA 100 32
SAHC1340_RS10880 2135921 .. 2135943 - -13.6   -3.2891   GTGGAGAACCAAAAG           GAAACCTTGT TTT ACAAGGTTTC           TAATACGTTATGTTA 100 60
SAHC1340_RS10870 2132889 .. 2132921 - -15.1  -5.33921   AAATCAATCAAAAAA      GCGCTACTATCAATA TCT TATTGACAGTAACGC      CTATATTTATCATAT 100 73
SAHC1340_RS10865 NONE
SAHC1340_RS10860 2130480 .. 2130526 -  -8.4  -5.29445   TTTTAATAATAAAAA GCTTGAATATATGATATA-AC TTTGTG GTGCGTATCATATATTCAAGC TTCGTTAGGTTGTTA 100 38
        queG 2129244 .. 2129257 -  -3.9  -3.22094   GTTGATATAAAACGA               TATGA TTTG TCATA                TTACTATTCTCTCCT  49 29
        trmL 2128758 .. 2128778 -  -4.1   -2.7674   TATAGCACTTAAGCA            TCATTTTTA TAA TGAAAATGA            GTAAATTTTAATTCA  45 33
SAHC1340_RS10845 NONE
SAHC1340_RS10840 2127732 .. 2127756 - -10.1  -5.64304   GAATATAATAAAAAA          GCTAGGTAACA AAA TGCTACCTAAC          TTCATATTCAAGATA 100 120
SAHC1340_RS10830 2126528 .. 2126540 -  -3.5  -2.66812   AACTGTAGTATATCA                TTAAA TAA TTTAA                TTGAGCAATTTATGA  44 164
        fumC 2125038 .. 2125079 -    -9   -5.4492   GACATAGACAAAAAA TAAAGCTTGAACACTACA TCTACC TGTAATGCCCAAACTTTA  TTTTATATTAATATT 100 44
SAHC1340_RS10815 2122539 .. 2122549 -    -4  -2.70525   TCTCCTTAAATCAAG                 CTAT TTT ATAG                 GAATTGTGAATTGTA  45 15
SAHC1340_RS10810 2121859 .. 2121876 -  -2.7  -4.85177   AAATCAGATTAAAAA             TTGTCTA TTTT TCGACAA              ATATTTAAAAGCTCA  63 43
SAHC1340_RS10805 2121008 .. 2121019 -  -2.2  -5.03994   GTTTACATACAAAAA                GCGA TGCC TCAC                 CTCTCGAAACAGGTG  64 80
SAHC1340_RS10800 NONE
SAHC1340_RS10795 2119285 .. 2119315 - -11.2  -5.79588   TCAAAACTAAAAAAA       CTACCCACAAAGTC TCG GACTCTGTCGGCAG       TCTATTCCTCTATTT 100 68
SAHC1340_RS10790 NONE
SAHC1340_RS10785 NONE
SAHC1340_RS10780 NONE
        yhaM 2113471 .. 2113512 - -12.5  -4.72272   TTTTCGCATTAAAAA TCGGACAGATGAGCTCA-TG TTT CAGTATACTCATCTGTCCGA TATCTTTTAATTCTT 100 39
SAHC1340_RS10750 NONE
SAHC1340_RS10745 2107859 .. 2107887 -  -2.4   -3.1875   TAGATGCTAATGTAA        TCTGAACGCC GTATCATTT GGCGTTCAAC        ATTACATGCACCTTT  43 67
SAHC1340_RS10735 NONE
        hemE NONE
        hemH 2105034 .. 2105046 -  -4.9  -2.56656   CATTAAAATATAGAC                TTGAT TTC ATCAA                CAATTGCACCGATAA  50 0
SAHC1340_RS10720 2103354 .. 2103403 -    -9  -5.46706   ATTGTAAAATAAAAA CACCTTAATTAGAAATGTTA TATCGCAAAG TGACATTTCTAATTAAAGTG TATTGTCATCATTTC 100 219
SAHC1340_RS10710 2102512 .. 2102562 - -14.4  -2.92439   AATAGTGTTAAAGCA TTTAAAAAGGTATAGGAGTTATAA AGT TTACAACGCCTATACCTTCTGAAA AAGAAATTATAAAAG 100 183
SAHC1340_RS10705 NONE
SAHC1340_RS10700 NONE
SAHC1340_RS10695 NONE
SAHC1340_RS10690 NONE
SAHC1340_RS10685 NONE
SAHC1340_RS10680 2101716 .. 2101729 -  -8.1  -3.14881   TAACCGCTTGACCAA               GGAGC CATG GCTCC                ACAGGTAGGACTCGA  71 19
SAHC1340_RS10675 2101622 .. 2101643 -  -9.5   -5.8187   TATGTAATAAAAAAA           CAGAAGCGA TATT TCACTTCTG            CTTGTATGACTCCTA 100 29
SAHC1340_RS10670 2101470 .. 2101501 - -11.7   -4.3613   TCCAAAATAAAAATA      GCGCTTAAAATGG GTAAAA CCAATTTAAGCGC       CTTTACGGAAGGTAA 100 31
        lukE NONE
        lukD 2095955 .. 2095966 -    -3  -3.89354   CGTCTAAATCAAGAA                CTTT TTCC AAAG                 ATAAAACCCCCTATT  53 264
SAHC1340_RS10645 2095783 .. 2095813 -  -9.9  -4.74453   TAATATATTTAAAAA      GACAAATAGAGCCC TTTC AGGCTCTATTTG-C       TGTATCCTTAACAAC 100 33
SAHC1340_RS10640 2094905 .. 2094932 - -13.6  -3.10053   ACATATTTGAATAGA        CAAATAGAGCCC TTTC AGGCTCTATTTG         CTGTAATCTTAACAG 100 34
SAHC1340_RS10635 NONE
SAHC1340_RS10630 NONE
SAHC1340_RS10625 NONE
SAHC1340_RS10620 2089960 .. 2089975 -  -2.6  -3.30159   CTAATTTTGCCATAA              TCAAAA ACTC CTTTGA               TTTATTAACTTGCTT  43 30
SAHC1340_RS10615 NONE
SAHC1340_RS10610 NONE
SAHC1340_RS16330 2087725 .. 2087737 -  -4.9  -4.07568   CCTGCTGTCCGAAAA                CAAAA TTA TTTTG                TATTCATATTTAACT  63 100
        splA 2085113 .. 2085125 -  -3.5  -3.03243   ACTTATTTTTCAATA                TTATT TTG AATAA                ATTCTTTTAATTGTG  46 0
        splB NONE
        splC NONE
        splD 2082613 .. 2082624 -    -3     -3.37   TTAATTTCTAAAAAT                CATT TATC AATG                 TATGGATGGATGATT  48 40
        splE NONE
        splF NONE
SAHC1340_RS10560 NONE
SAHC1340_RS10555 NONE
SAHC1340_RS10550 NONE
SAHC1340_RS10535 2074822 .. 2074852 -   -10  -3.00525   TTGTTCTAAATTAGA       GAATATTTTTTTGA AAT TCAAATAAATATTC       TTTGCGTATTTTGAT  81 361
SAHC1340_RS10525 2069625 .. 2069640 -  -3.4  -3.24091   TACAATCATAAGATA              TTTTTT ATTC AAAAAA               TCAATCTCCTTTTCA  47 525
SAHC1340_RS10520 2069144 .. 2069176 -  -2.1  -4.85618   AAATAAGTAAGAAAA     CCTCGGCACT-TTA TCATTT TAATAGTGTCGAGA      TTTTTATAGATACTA  62 108
SAHC1340_RS10510 NONE
SAHC1340_RS10500 NONE
SAHC1340_RS10495 NONE
SAHC1340_RS10490 NONE
SAHC1340_RS10485 2066016 .. 2066070 -   -11  -3.81279   ATATTTTATAAAATA GACCACGCATACCTATCTATAAAC GGACAAT GTTTATAAATGAGTTTGCATGGTC TTGAATTGTATTAAA  93 85
SAHC1340_RS10455 NONE
        menE NONE
        menC 2059046 .. 2059057 -  -4.4  -3.93742   TTCACATAAACATAA                CCAT TAAT ATGG                 TTGTAATTGAGTTAT  59 17
        ytkD NONE
SAHC1340_RS10430 2057271 .. 2057307 - -16.8   -3.9941   CTTTTTACAATTAAA    GAGCCAACCGTTGTTA TAGTC TAACAATGGTTGGCTC    CTCTTATTTTATGTG 100 223
        tnpA 2056530 .. 2056549 - -13.6  -4.61284   AATACTAAATCAAAA            CCACCCGT GTGA ACGGGTGG             TTTGTTCTGCGGCTA 100 121
SAHC1340_RS10415 2053286 .. 2053323 -  -7.3  -3.99216   AATAGAAAAGCTAAA   GATTTTCGATACATA TTATCATT TATATACCGAAAATC    TTTTATTTAGCTATA  72 55
SAHC1340_RS10410 2052280 .. 2052312 -  -7.8  -5.42514   TGACAAACTAAAAAA      GCCGAAGTAACAAC ATATA GTCATCACTTCAGC      CTAACATTTAATTGA  95 33
SAHC1340_RS10405 2051162 .. 2051195 - -14.9  -5.60864   TACATATCAAAAAAA     GCTGATTTCTATCAA ATAA TTAATAGAAATCAGC      TTTTTTACATTGCCT 100 105
SAHC1340_RS10365 2046156 .. 2046182 - -13.8  -4.68994   ACTATGATGGAAAAA         CCCCCATAAGCA CAA TGCCTATGAGGG         TTTAAATATATTTAT 100 44
SAHC1340_RS10355 2044212 .. 2044243 -  -7.4  -4.45168   CCGTTAAAACATAAA      CGTGCACCGATACA AATT TATATCAATGCACA       TTATATTGTTGGTAT  81 169
SAHC1340_RS10340 2042931 .. 2042945 -  -3.6   -5.1675   TCACGTATTAAAAAA               CAAAAA ATT CTTTTG               TTCGTTTACTTAGTT  69 31
SAHC1340_RS10335 2041743 .. 2041775 - -15.1  -4.74103   TCTCTAATGCAAAAA      GACGCTTTCTATC AAAACAA GATAGAAAGCGTC      TTTTTAGTATGTCCG 100 71
SAHC1340_RS10315 2037025 .. 2037053 -  -4.6  -5.38054   CTCTATAAACAAAAA        TCCTCACATCAT GAATT AAGATGCAAGGA        GAAAAATTTATCGTT  78 454
        ribD NONE
SAHC1340_RS10305 NONE
SAHC1340_RS10300 NONE
SAHC1340_RS10295 2033548 .. 2033589 - -10.3  -4.19887   AGACATAAACAATAA TTTAGGAGTCTGGAACAAT AATC AATGTTCTAGGCTCCTAAA  TGTTATATTGGCAGT  91 86
SAHC1340_RS10285 NONE
SAHC1340_RS10280 2031381 .. 2031436 - -13.1  -3.91032   GAAGTATTGTATAAA TAGAGAACAGCAGTAAGAT-ATTTTC TAATT GAAAATTATCTTACTGCTGTTTTTTA GGGATTTATGTCCCA 100 55
SAHC1340_RS10265 2029442 .. 2029468 -  -8.8  -5.29445   TGCCAACAACAAAAA         GAGGTTTTCAAC TTA ATAGAAAACCTC         TTTTTATGCTATTAA 100 43
SAHC1340_RS10250 2026508 .. 2026518 -  -2.6  -3.40102   TTATACAAATTAATA                 TTAT GTT ATAA                 CGACATTTATTTCAA  45 68
SAHC1340_RS10245 NONE
SAHC1340_RS10240 2023455 .. 2023482 - -10.7  -5.22312   ATTCATACCAAAAAA        CACCAAGCAAC CGAAAC GTTACTTGGTG         TCATTACAAATGTAA 100 66
        sasC 2016579 .. 2016627 -  -8.7  -5.30616   TCATTCAAATAAAAA TGACCTTAATATAACTGAGTCACT AAAA AGTG--TC-GTTATATTAAGGTCA TTTCGTTAATTATGA 100 35
SAHC1340_RS10225 NONE
SAHC1340_RS10220 NONE
SAHC1340_RS10215 2011936 .. 2011948 -  -7.7   -2.8867   ACTGAATGAAAATAC                GCTTG TAA CAAGC                TTTTTTCAATTCTAG  66 130
       sapep NONE
         dat 2008521 .. 2008550 -  -9.4   -4.5442   CTTTCAATTAGAAAA       TGGCTCTAGAAA TAGGTT TTTCAAGAGCCA        TATATTCTAATTTAT  90 517
SAHC1340_RS10200 NONE
        trmB 2007004 .. 2007039 - -10.6  -5.20216   TATAGTACGAAAAAA    CACTTATGATTGTATG TGTA CATACCCTCATAAGTG     CTCTATTTTTGTGAA 100 28
SAHC1340_RS10190 2005650 .. 2005687 - -10.1  -4.87318   CGTAAAACTTAAAAA   TGAGCCACACCCTAAT TAGTAAG ATT-GGATGTGGCTCA   ATTTTTTATTTTTGA 100 68
SAHC1340_RS10180 NONE
SAHC1340_RS10175 2003714 .. 2003747 - -11.2  -3.38297   ATCAACACATAGTAA     CAGAGAAAAACGAG TATTAC CCCGTTTTTCTCTA      GTCTAAATTACACGT  93 33
SAHC1340_RS10170 NONE
SAHC1340_RS10165 NONE
SAHC1340_RS10160 NONE
SAHC1340_RS10155 1996998 .. 1997010 -  -3.4  -3.26811   TAAACATATTAAAAC                GCAT TTTTC ATGC                CTAATTTATCTAAAT  47 6
SAHC1340_RS10150 1996371 .. 1996413 -   -16  -3.29829   TATATCCTCCTATAA CAAATGCACTTAAATAAG TAACAAC CTCATTTAAGTGCATTTG TTTAATTATTAATTA 100 38
SAHC1340_RS10145 1994893 .. 1994914 -  -7.3  -5.23316   GATGATATCAAAAAA           GGTAAGCAC CTGA ATGCCTACC            TTTTATTTTGAAATT  91 105
SAHC1340_RS10140 1994281 .. 1994304 -  -8.2  -2.56122   TGCCATTAGAAAATC          CTTCACCAAC GTAA GTTGGCAAAG           ATGCCAAGTTCACTT  66 467
SAHC1340_RS10130 1991748 .. 1991790 - -10.8  -5.36441   TTTCTATACAAAAAA TAATAGCCACTCTAAAAGTA ATA TACTCTTAGAATGGCTGTAA GTTTAAAATTGTCGA 100 106
SAHC1340_RS10125 NONE
        ccpA 1990283 .. 1990328 - -13.5  -5.15682   AAAAGATAAATAAAA GGCATTCTTCCAAC-ACCCATA TAA TTTGGGTCGTTAGATGAATGCC TAATTTTGTGAATTT 100 39
        acsA 1986327 .. 1986343 -  -2.3  -4.22883   TATTATTTAAAATAA              TCATCTT CCA AAGATCA              TATTAAAAATAAAAA  52 225
SAHC1340_RS10100 1984353 .. 1984388 -    -7  -5.23316   TAGCACAGCAAAAAA    CCGAACTGCT-GAAATA ATG CATCTCCAACAGTCCGG    TCTATTAAACTATTT  91 73
        harA 1981265 .. 1981306 -    -9  -4.93696   TCCAAATATTAAAAA CAGCAGTAAGATTATTTTC AATTA GAAAATT-TCTCACTGCTG TTCTTTTTATTTACT  95 135
SAHC1340_RS10085 1980815 .. 1980829 -  -2.1  -4.53765   ACATATAGTAGAAAA               GCAAA TGAAC TTCGC               CTAGCAATTAGATTA  59 389
SAHC1340_RS10075 1978595 .. 1978637 - -15.9  -3.38134   AGAAAAGTACATTAA GAGCCTACTCAT-TACATTC TTAG GAATGAATATGAGTAGGCTC TAATTTATTTAGCTA 100 52
SAHC1340_RS10065 1976420 .. 1976431 -    -3  -3.79866   GTAGAAATATAAAGA                TTAC TAAT GTAA                 CTAGAATAACTACTT  51 101
SAHC1340_RS10060 1974867 .. 1974896 -    -5  -5.52986   ATTTGACTAAAAAAA       GCGCAAACCCTA TTGAAG TTAGATTTGCGC        TTTAGCTGTTTAAAT  79 42
SAHC1340_RS10055 1973548 .. 1973587 - -13.1  -4.36595   TATGTAAATTCAAAA  TGCCAAGAAGACATTGGA TTACT TCCATTG-CTTCTTGGCA  TTTTTTCATTATTAA 100 114
SAHC1340_RS10030 1969192 .. 1969209 - -11.3  -4.19624   TACGTTCAATACAAA             CACCCAC AATT GTGGGTG              TTTTTTTTATTAATT  95 208
        ezrA 1964603 .. 1964633 - -13.4  -5.38047   TATCCATATAAAAAA       GAAGCTAGACAACG TAT CGTTGGCTAACTTC       AATTATTAAACTCAT 100 95
SAHC1340_RS09995 NONE
        thiI NONE
SAHC1340_RS09985 NONE
         tpx 1960486 .. 1960500 -  -2.9  -2.78018   AGGTCTTAGCAATCA               TAGAA AACAA TTCTA               TTTTAATGCTGTTGA  43 88
SAHC1340_RS09975 NONE
SAHC1340_RS09970 1957997 .. 1958020 - -11.8  -3.23216   CTTGATCATTATGAA          CCAAGTGCAA CTTT CTGCACTTGG           TTTTTTATTGTTTAT  95 208
         ald NONE
SAHC1340_RS09955 1955904 .. 1955916 -  -7.7  -4.82678   GGATAAAAATGAAAA                GCTTG TTA CAAGC                GCATTCTCATTCAGT  88 85
SAHC1340_RS09945 1953899 .. 1953922 -  -2.4  -4.76644   AACACCCACTAAAAA          TATGCAGACG ATAA CTTCCACATA           GATTAGCGAGGTGTT  60 66
SAHC1340_RS09935 1951679 .. 1951697 - -10.3  -3.35696   CTACAAACAATGCAA             GTTGGGG TGGGG CCCCAAC             GTTTGTGCGAAATCT  88 70
        pde2 NONE
SAHC1340_RS09925 1947255 .. 1947293 - -14.9  -3.18419   AAAACTAATATAAAC   GCAAACTGATGGTTAAA AAATA TCTAACCATCAGTTTAC   TATATCATAATTTAT 100 54
SAHC1340_RS09920 1945450 .. 1945460 -  -3.2   -3.2632   AAATCTTTAAACATA                 GGAA AAC CTCC                 AAATAACCTCTGTTC  46 208
SAHC1340_RS09915 NONE
SAHC1340_RS09910 1943517 .. 1943546 - -10.2  -5.64006   ACTTAATTAAAAAAA       GATTAGTAGCCA CAATTT TGACTACTAATC        TTAGTTAAAATTCAG 100 126
        pfkA 1942422 .. 1942433 -  -4.4  -3.64466   ATCTTATATAGATAA                CTTG TTAG CAAG                 TTCATATAGACTATA  55 2
         pyk 1940588 .. 1940618 - -10.6  -5.31059   AGATGAACCAAAAAA       CGCCTTTCCATT GTTGATA AATGGAAAGACG       TTTTTTTATAAATTA 100 38
SAHC1340_RS09880 NONE
         icd 1934110 .. 1934143 - -10.4  -4.68424   CAATTCATTTAAAAA     GGCGAACCTAGCAA TTAAAG TTGCTAGACTCACC      TAATTTTATTTTGCT 100 40
SAHC1340_RS09865 NONE
SAHC1340_RS09860 1931120 .. 1931149 -  -3.8  -2.74322   TTCAAGTGTTTAAAT       TAAGATTTATTT CCGTTC AAATAAAACTTA        TTACTTTTTAATTAA  45 279
SAHC1340_RS09855 1929193 .. 1929203 -    -4  -4.56702   TCGTAATTAAAGAAA                 CTAT CTC ATAG                 AGTATTTATACACGA  63 239
        polA NONE
        mutM NONE
SAHC1340_RS09840 1924906 .. 1924950 -  -5.3  -5.24129   CTTTTTTATAAAAAA TAGTCATTACT-TACATACA TCAACG CGTACGTAAAGTAATGACTT ATTTATAGTGTAATA  80 41
         gap 1923731 .. 1923754 - -11.8  -5.95286   ATTAAAAATAAAAAA          CCTAACTCCG AAGT CAGAGTTAGG           CTATAAATTAATTGT 100 42
        nrdR NONE
SAHC1340_RS09825 NONE
        dnaI NONE
SAHC1340_RS09815 1920506 .. 1920530 -   -10  -6.12458   GAAAAAAACAAAAAA          TCCCGCCCCT ATACA AGGGACGAGA          TCGTCGTGGTACCAC 100 50
        thrS 1918094 .. 1918124 -   -12  -5.48054   ATTAAAAGTAAAAAA       GTGGCTACATACCT TTA AGATATGCAACCAC       TTTGGCAATTATCTA 100 321
SAHC1340_RS09805 1916309 .. 1916339 - -19.2  -4.90266   TGCACCAAGCAAAAA       GGAAGAGCAGGTAT AAA ATACCCGCTCTTCC       TTATACACAGTTATG 100 187
        infC NONE
        rpmI NONE
        rplT 1915078 .. 1915096 -  -9.6  -6.04324   TTAAAAAATAAAAAA             GAGATGAC AAT GCCATCTC             TTTTTTATAAGTGTT 100 42
SAHC1340_RS09780 NONE
SAHC1340_RS09775 NONE
SAHC1340_RS09770 NONE
SAHC1340_RS09765 1911888 .. 1911922 - -13.8  -3.90744   TTTTTGCTTAAAGAA     TAGTAGCAGATACATA AGC TATGCATCTGCTACTC     ATTTTTGTAATTTAA 100 54
        clpX 1910466 .. 1910511 -   -10  -5.35459   ATACATTATAAAAAA GCTCCGATCAAAGTTAA-ACT ATTTG AGCGTCAACTTTGATTGGAGC TTTTCACTTTTATAA 100 52
SAHC1340_RS09755 1909654 .. 1909676 -  -3.6  -3.58522   AGTACGATGCTTAAA           TAAATTATAA TCT TTCTAATTTA           CTTTTGAGTTTTTGA  50 143
SAHC1340_RS09750 NONE
        ccsA NONE
        hemC NONE
SAHC1340_RS09735 NONE
        hemB NONE
        hemL 1903385 .. 1903407 - -16.4  -4.73448   ATATACATTTAAAAA           GAGCCTGAAC AAA GTTCAGGCTC           TCAATTTGTCCGTAT 100 43
SAHC1340_RS09720 NONE
SAHC1340_RS09715 1902058 .. 1902075 -  -2.8  -3.02043   AATGCTCTGCTAATA             TTAGAT ATCTTA ATCTAA              AAATAGATGTACAAC  42 106
SAHC1340_RS09705 NONE
SAHC1340_RS09700 1896996 .. 1897041 -    -5  -5.34555   TTAGAGCATAAAAAA TAACCATGAAG-CTCTACCTA TTGAT TAAATAGATTCTTCATGGCTA TTTTAGTTTTAGTTT  77 40
SAHC1340_RS09690 1895707 .. 1895719 -  -2.7  -3.32865   TTAACAATAAAATGA                CAAAA TGT TCTTG                TGTTAAATCTTTCAT  43 385
SAHC1340_RS09680 1894138 .. 1894148 -  -5.4  -3.05819   CACAGATTTTTAACA                 CGTT CAA AACG                 AACCCAACGATTCCT  54 201
SAHC1340_RS09670 1891831 .. 1891841 -  -2.6  -3.61268   TATTGAACTTCCAAA                 TAAA TCT TTTA                 CGATTTTTAATGTTT  47 234
SAHC1340_RS09655 1888934 .. 1888973 - -14.6  -4.60746   TCAAAAATAGTAAAA  CCTGTATCTTAAATTACT TAAT AGTAACATAAGATACAGG   CTGATTTTTTATTCA 100 116
SAHC1340_RS09650 1888246 .. 1888268 -    -2  -2.54655   AAAACTCCTAATGTA           CTAGTTTAGA ATT TTTTAACTAG           TTCCACATTAGGAGT  39 88
SAHC1340_RS09640 NONE
SAHC1340_RS09635 1887177 .. 1887189 -  -3.5  -2.71369   AGTTTAAATAATCGA                TTTAA ATT TTAAA                ATTATTTGTTTGTAT  44 27
        mreC NONE
        mreD 1885427 .. 1885441 -  -4.3  -3.38812   CCTGTTTCAATAATA               GCAAA CATAC TTTGC               ACCTCCTGTATAATA  53 185
        rplU 1885113 .. 1885129 -  -4.5  -3.25341   ACTGTAATATCAACA              GTAATCA TAA TAATTAC              GCGTTGATTTTATCG  52 22
SAHC1340_RS09615 NONE
        rpmA 1884467 .. 1884489 - -12.1  -5.56112   ATAAAAAGTAAAAAA           CACCAGAAG ATTCA CTTCTGGTG           TTAACTAGACAAAAT 100 40
        obgE NONE
SAHC1340_RS09600 NONE
        ruvA NONE
        ruvB NONE
        queA NONE
         tgt NONE
        yajC 1878225 .. 1878249 -   -13  -4.78149   CTTATAACTTAAAAA          GGATGAAACG CTATT CGTTTCATCC          TTTTTAATACCACTT 100 45
       secDF 1875670 .. 1875704 - -10.2  -5.13137   TAAATAAAGTAAAAA     GCGGTATGTGAA CTCTTTATTGT TTCACATACCGC     TTAATTCATTTTAAA 100 36
        recJ NONE
SAHC1340_RS09560 1872596 .. 1872616 -  -7.7  -5.55769   TTTTACAATAAAAAA            TCCTAACAT CTC ATGTTAAGA            AAACTTAAACAACTT  95 108
        tnpA 1871853 .. 1871872 - -13.6  -4.58773   TTCAGTAAATCAAAA            CCACCCGT GTGA ACGGGTGG             TTTGTTCTGCGGCTA 100 121
SAHC1340_RS09550 NONE
SAHC1340_RS09545 NONE
SAHC1340_RS09540 1867656 .. 1867686 -  -6.8  -5.56372   AAAGCAAAAGAAAAA       GCCCTTGCACAGCC TGA AACTGCACAAGGGA       CGAATATCCGTGTTG 100 343
SAHC1340_RS09535 NONE
        aspS 1864456 .. 1864466 -  -2.6  -3.31097   CCACATAATTAAAAT                 TAAT GAA ATTA                 TAACAAACCAAAGTT  43 58
        ssrS 1864205 .. 1864227 -   -15  -4.95896   AGAAACGCATAAAAA           TACGCAAGAC AAA GTCTTGCGTA           TCGATAGAGTCCGTA 100 29
SAHC1340_RS09520 NONE
SAHC1340_RS09515 1863152 .. 1863208 - -10.5  -3.00039   TAGCTATAATCAAAT CAAAACTGACTAGTACACGAGGCATA TTCTAC TATGCTT-GCGAACTAGTCAGTTTTA GTTTTATGGTGTGGT  84 82
SAHC1340_RS09505 1861231 .. 1861268 -  -8.5  -3.70902   TCTGCCATAGTGAAA   CCTCCTTGGATGTATAT ATTT ATATACCACTAAGGAGG    TTCGCTAAACATTAT  78 80
SAHC1340_RS09500 NONE
SAHC1340_RS09495 1860763 .. 1860819 - -18.2  -3.46336   ATTCTAATGCAAATA TGAAAGCGCCCCTTCAACTTTACACT GTGTA AGTGTTTATTTGATGGGGCGCTTTCA AAATATTGAAAAGCA 100 61
SAHC1340_RS09485 NONE
        mnmA 1856911 .. 1856948 -  -8.5  -2.64293   CCGCCAATATAACAT   TGTAGAGCCTAGGACAT TGTG ATGTCCCAGACTCTATC    CTCATGAATTATTCT  70 109
SAHC1340_RS09475 NONE
SAHC1340_RS09470 1853201 .. 1853225 -  -3.5  -6.04324   TTAAAAAATAAAAAA          CGCCCATCC TCAAAAG GGACGAACG          TTATCGCGGTACCAC  90 223
        alaS NONE
SAHC1340_RS09460 1850109 .. 1850126 -  -5.7  -3.06694   ATCGAGTCCTAAAAT             TTTATGT TGTA ACATAAA              TTATTTATTTTGCTC  57 26
        ruvX NONE
SAHC1340_RS09450 1849323 .. 1849359 -  -3.8  -5.08824   GCTTGACTTAAAAAA   TACTCTTGCC-TCCCCA TCTT TAAGGTTAGCAAGAGTA    AAATCTTTTTAATTA  71 38
SAHC1340_RS09445 NONE
SAHC1340_RS09440 NONE
SAHC1340_RS09435 NONE
         udk NONE
        greA 1845056 .. 1845092 -  -8.1  -5.47159   TTTGAATATAAAAAA    GCACGACCGAAGTAT CATTAAC ACACTTCAATCGCGC    AATTAAATAATCTAT  95 49
        pxpB NONE
SAHC1340_RS09415 NONE
SAHC1340_RS09410 NONE
SAHC1340_RS09405 NONE
        pxpA 1840483 .. 1840499 -  -3.7  -3.29511   TTTAGCCCCCTATAA              GGATTGA ATA TCAATGC              CTTCTTTCATTAAAA  47 3
SAHC1340_RS09395 1839099 .. 1839125 -  -5.9  -5.22006   TCATCACAACAAAAA         GAGCAGTACAT TTGTC ATGCACCACTC         TCCCTTAAAATATAT  84 135
SAHC1340_RS09390 1837622 .. 1837648 -  -5.9  -5.27206   GATACACAACAAAAA         GAGCAGTACAT TTGTC ATGCACCACTC         TCAACAAATATATTT  84 103
SAHC1340_RS09385 1836430 .. 1836440 -    -4  -3.86252   GTGCATTAAAGATAA                 TTCT AAT AGAA                 AACAGCAGTAAGACT  54 145
        mtnN NONE
SAHC1340_RS09365 NONE
        yqeH NONE
        aroE NONE
        yhbY NONE
        nadD NONE
        yqeK NONE
        rsfS 1830443 .. 1830461 -  -5.3  -4.06997   CATCAAAAATAAATA             CACCTGA ATCAG TCAGATG             ATGATAAACATTGAT  63 391
SAHC1340_RS09325 1829317 .. 1829333 -  -2.3  -3.13773   TTCCATACTTAAAAT              TTAGTAA CAT TTTCTAA              TAATATAAGATTAAT  41 75
SAHC1340_RS09320 NONE
SAHC1340_RS09315 NONE
        holA 1825559 .. 1825588 - -15.3  -3.56366   AATAATCTTTTTAAA       TAAAAGTTCAAGC GCAT GCTTGAACTTTTA        TTTTTTATAAAGATA 100 30
        lepA 1822802 .. 1822824 -  -5.6  -5.26119   TCCTTAAAAATAAAA           TTACATGAGT AAA ACTCATGCAT           AAGGGAGTGGGACAG  84 329
SAHC1340_RS09290 NONE
        hrcA NONE
        grpE 1819627 .. 1819643 -  -3.1  -3.77588   AGTCTATACCAATAA              TTTTACT CAT AATAAAA              TTCCTCCATTTAATC  51 87
        dnaK 1817737 .. 1817765 -    -9  -5.30616   CTATCCAAATAAAAA        GCCAAAGCCAAT GTTCT ATTGACTTTGAC        TTTTCAGATCATGAC 100 64
        dnaJ NONE
        prmA 1815575 .. 1815589 -  -3.6  -3.72576   TTTTGGTCTATGAAA               TAACGT TGC ACATTA               TTCACTCACTTTCTG  53 23
SAHC1340_RS09260 NONE
        mtaB 1813336 .. 1813361 -  -5.6  -4.22407   CATCAAAATCACAAA         GACTTTTAGA TTTTGT TCTAAAAATC          TCTTAATAATTTATT  68 144
SAHC1340_RS09250 1812925 .. 1812959 - -20.4  -5.88565   TTGACAACAAAAAAA     CATCACATATTAGTGT CAG ACACTAATATGTGATG     TTTGTTTTATATAAT 100 77
SAHC1340_RS09245 NONE
        floA NONE
SAHC1340_RS09235 1810321 .. 1810348 -  -6.4  -5.53288   CTTAACGTAAAAAAA        CAAGCAACTACCA TTA CGATAGT-GCTTG        TTTTCAAAAAATTTT  89 39
SAHC1340_RS09230 NONE
        ybeY NONE
SAHC1340_RS09220 NONE
         cdd NONE
         era NONE
        recO 1806152 .. 1806191 - -12.4  -4.65895   TTTTCTATTCAAAAA  GGTATTCAAATAAACACA TCTA TGTGGCTACTTGAATACC   TTTTATTATTTTATG 100 41
SAHC1340_RS09195 NONE
SAHC1340_RS09190 1802875 .. 1802885 -    -4  -3.49687   ATTTTCGACAAAAAT                 GAAA TCA TTTC                 GATTTATTTTGTTCA  50 19
SAHC1340_RS09185 1801013 .. 1801027 -  -6.4  -3.05775   ATTATTCTTTAAAAT               CACATG CTA CATGCG               TTCTTTATTCTTAGC  60 17
        rpoD 1799581 .. 1799611 -  -8.5  -5.14563   TCCTTTATGAAAAAA      GAGGTTGA-ACATT ATTC AATGTACCAACCTC       ACTCAAGTTAAATCT  95 103
SAHC1340_RS09175 NONE
SAHC1340_RS09170 1797734 .. 1797775 -  -9.7  -3.15131   TTTAAATAAAAATAT TAAAACCTCGAAATTTCAA AATT TAGAAATCCCGAGATTTTA  GTTTAAATATATTGA  79 28
SAHC1340_RS09165 NONE
SAHC1340_RS09160 1795327 .. 1795337 -    -4  -3.46302   TAACATATGTAAACA                 GTAA TGT TTAC                 GACTCAAAATTAGAC  50 106
SAHC1340_RS09155 NONE
SAHC1340_RS09150 NONE
SAHC1340_RS09145 1793153 .. 1793194 -    -7   -5.1925   CTATAATTTAAAAAA TGAGATTTATGCATACATCT GACC AAATGT--GCATAAATCTCA TTTCTTTATATTAAT  91 36
SAHC1340_RS09140 1792294 .. 1792313 -  -9.3  -4.89054   TTGACAAAAAAATAA            CGGTCTC ATTTAA GAGACCG             AACAAGTAATCATAC 100 42
SAHC1340_RS09135 1790107 .. 1790117 -  -3.2  -2.85909   AAAATTTTACAACCA                 TGCG CTA CACA                 ATCGTCAGGTTAAAT  43 42
        rpmG 1789809 .. 1789837 -  -9.7  -4.93365   GTGCATAATTAAAAA        GGTGAAACCTC TTATTTT GAGATTTCACC        TTTTTTATTGTTAAT 100 60
SAHC1340_RS09125 NONE
SAHC1340_RS09120 NONE
SAHC1340_RS09115 NONE
SAHC1340_RS09110 NONE
SAHC1340_RS09105 NONE
SAHC1340_RS09100 1785487 .. 1785516 - -13.7  -5.43866   GAATCTTCAAAAAAA       CACCTCCTACATA TAAT CACGTAGGAGGTG        TTTTTATTACTTCAA 100 42
SAHC1340_RS09095 NONE
SAHC1340_RS09090 NONE
SAHC1340_RS09085 NONE
SAHC1340_RS09080 NONE
SAHC1340_RS09075 NONE
SAHC1340_RS09070 NONE
SAHC1340_RS09065 NONE
SAHC1340_RS09060 1781127 .. 1781148 - -10.9  -5.09245   TTAAAATTATAAAAA           CAGGATAGC AATC GCTACCCTG            TTTATAAATCACCAA 100 135
        gcvT NONE
       gcvPA NONE
       gcvPB 1777019 .. 1777029 -    -4  -4.06527   AAAATGAAAAGACAA                 TTTC TAT GAAA                 GAATAATACCAAACC  56 173
SAHC1340_RS09035 1775098 .. 1775115 -  -4.1  -4.51847   AAACAACTTACAAAA             GGACAAC AAGC GTTGTCA              AAATTAAACTTAAAT  67 348
SAHC1340_RS09020 1773360 .. 1773373 -  -3.1  -3.37533   TTTTAAAATCATTAA               CCGAA ATCA TTCAG                TTTCCTCCTCATTTT  47 47
         efp 1772676 .. 1772690 -  -4.4  -4.64766   TTTATATTTTAAAAA               TTATTT TAA AAATAA               AAAGCCTCATATCAG  68 147
        accB NONE
        accC NONE
SAHC1340_RS09000 NONE
        nusB NONE
SAHC1340_RS08990 NONE
SAHC1340_RS08985 NONE
SAHC1340_RS08980 1767187 .. 1767198 -  -4.4  -4.27474   AAATCGATTAACAAA                CAAC GTCA GTTG                 AATATGCCTTTTGAG  64 84
        argR NONE
        recN NONE
        lpdA NONE
SAHC1340_RS08960 NONE
SAHC1340_RS08955 NONE
SAHC1340_RS08950 1759699 .. 1759713 -  -2.8  -2.84617   TACTGCAAAAATGCA               TTCAAC CAT GTTGAT               TATTGTTCTTTATCT  41 140
SAHC1340_RS08945 NONE
SAHC1340_RS08940 1757991 .. 1758012 -    -3  -3.73647   CGCATGTATTAATAA           GTTATCGT ATTGCA ACGATTAC            TTTCAAACATGGGTC  51 59
SAHC1340_RS08930 1756345 .. 1756355 -    -4  -2.92114   TACACTACACTAAAT                 CATT TCG AATG                 TCGCGCAACTATTTT  46 14
        gndA 1754837 .. 1754858 -  -4.5  -5.53079   AAAAGATATAAAAAA           GGATAGT ATCTTTCA ACTATCC            TTTAATCAATATTAT  78 37
SAHC1340_RS08920 NONE
SAHC1340_RS08915 NONE
SAHC1340_RS08910 NONE
SAHC1340_RS08905 1751338 .. 1751390 -    -8  -4.61916   ATAAAAAACAAAGAA GCCCCCTAATA-TATCTATAGGTC TACAAAT GGCCT-TAGATTCTATTAGGGGGC ATATTAATATGTTAA  82 37
         rnz 1747409 .. 1747454 -  -4.8  -5.06961   ACCAATAAAAACAAA CCCGCCAA-CACA-TGTATGCA TCAT CGCAAGCACTGTGTTTGACGGG TTATTTTTATAATTT  74 77
SAHC1340_RS08880 NONE
SAHC1340_RS08875 1745336 .. 1745350 -  -2.8  -4.18644   ATGATAGAAATTAAA               GCGT TGTCCTC ACGC               ATCAGTATTTAGTAA  53 100
SAHC1340_RS08865 1743561 .. 1743575 -  -4.3  -3.07994   CTTAACGCGATTTAA               TCGTT CTTCC AACGA               TGTCCACTCCCCTAC  50 127
SAHC1340_RS08860 1743094 .. 1743116 - -10.6  -5.42862   ACACCTCTAAAAAAA           GCGAAGGTTA ATT TAACCTACGC           AATTTACTATCCTTT 100 32
        xerD 1742127 .. 1742167 -    -5   -5.1848   AACCAATTTAAAAAA GCCACAATAGCACA-GAC ATTTTTA GTCATGTG-TATTGTGAC TTTTGAGTTATTGTT  74 45
SAHC1340_RS08845 NONE
        scpB NONE
SAHC1340_RS08835 1739466 .. 1739476 -  -2.6  -4.49644   ATTAAAAACCTAAAA                 TTTT GTG AAAA                 AATTCTCAAACTTTG  58 64
        srrA NONE
        srrB 1736863 .. 1736901 - -13.4  -5.31059   ACATCAATCAAAAAA   CGCATGCTATAAATTAGA GTC TCTAATCAATAACATGCG   TTCTGAAATAACTAT 100 49
SAHC1340_RS08820 NONE
SAHC1340_RS08815 1733222 .. 1733236 -  -3.6   -4.9448   ATTTATTAAACAAAA               CTATTA ATA TAACAG               GTACAATTCACCGCA  70 520
SAHC1340_RS08805 1731582 .. 1731599 -  -7.7  -5.56112   ATAAAAATCAAAAAA             CGCCTAC TAGT GTAGACG              TTGAATGGTGGTGAG 100 169
SAHC1340_RS08780 NONE
SAHC1340_RS08775 NONE
SAHC1340_RS08770 1728529 .. 1728542 -  -2.3  -3.87627   GTTGGAGACAAAATA               GTAGC TATC GCTTC                AGCTAAAATCGAATT  50 49
SAHC1340_RS08760 1727884 .. 1727900 -  -2.3  -4.20086   AGATATACATACAAA              GTATTTT CAA AAACTAC              ATTTCGAAGATGTAA  54 191
SAHC1340_RS08750 NONE
SAHC1340_RS08745 NONE
SAHC1340_RS08740 NONE
SAHC1340_RS08735 NONE
SAHC1340_RS08730 NONE
SAHC1340_RS08725 NONE
SAHC1340_RS08720 1724448 .. 1724466 -   -11  -4.19735   TTCTTTAAAATTAAA             GTGGGGCT AAA AACCCCAC             CTATTGACTTATAAG  95 34
SAHC1340_RS08715 NONE
SAHC1340_RS08710 NONE
SAHC1340_RS08705 NONE
SAHC1340_RS08700 NONE
SAHC1340_RS08695 NONE
SAHC1340_RS08690 NONE
SAHC1340_RS08685 NONE
SAHC1340_RS08680 NONE
SAHC1340_RS08675 1719678 .. 1719692 -  -2.8  -2.76281   TCATACATAAAAATT               TATCTG TTA CAGGTA               GTCGGGCATACTTTC  40 379
SAHC1340_RS08665 NONE
SAHC1340_RS08660 NONE
SAHC1340_RS08655 NONE
SAHC1340_RS08650 1718762 .. 1718779 -  -3.5  -4.77896   TAATTAATTCAAAAA             TGATAAT ATCT ATTACCA              TGAAACTTCAGCTCT  64 20
SAHC1340_RS08645 1718487 .. 1718504 -  -7.7  -2.72977   ATTTTAGATAGAGCA             GAGAAGC CAAC GCCTCTC              TTTAGCTTTTGAATC  65 27
SAHC1340_RS08640 1715860 .. 1715913 -    -8  -3.66401   GCTAGAAAGGAAAGA GGTGTTGTATCATTTGTTGCATCAATG TTG CATC-AC-CAA-AAATGATACAACACC TACGATTACTTTTTA  74 119
SAHC1340_RS08630 NONE
SAHC1340_RS08625 NONE
SAHC1340_RS08620 1713448 .. 1713470 - -10.6  -4.78839   AATCGTACAACAAAA           GACACACCAC AAA GTGATGTGCC           TCATATACATGTTTC 100 133
SAHC1340_RS08615 1713077 .. 1713087 -  -2.6   -4.7254   AGGGGGGATTAAAAA                 TTAT TTT ATAA                 TTCTTTTATTTAAAT  60 35
SAHC1340_RS08610 NONE
SAHC1340_RS08605 NONE
SAHC1340_RS08600 NONE
SAHC1340_RS08595 NONE
SAHC1340_RS08590 NONE
SAHC1340_RS08585 1707441 .. 1707455 -  -4.4  -2.64803   CGATCTTTAAATTCA               TTAAAT TCC ATTTAA               AAATCACCTACCACT  48 33
SAHC1340_RS08580 NONE
SAHC1340_RS08575 NONE
SAHC1340_RS08570 1706319 .. 1706337 -  -4.5  -5.18355   CTTAAAAATTAAAAA             GCACACC TATTC GATGCGC             TGATTTTTATAATAT  73 13
SAHC1340_RS08565 NONE
SAHC1340_RS08560 1705075 .. 1705093 -  -8.1  -5.65927   TATTCAAATAAAAAA             GACGCAG ATATA CTGCGCC             TTAAATCCCTATCCG 100 34
SAHC1340_RS08555 NONE
SAHC1340_RS08550 NONE
SAHC1340_RS08545 NONE
SAHC1340_RS08540 NONE
SAHC1340_RS08535 NONE
SAHC1340_RS08530 NONE
SAHC1340_RS08525 NONE
SAHC1340_RS08520 NONE
SAHC1340_RS08515 NONE
SAHC1340_RS08510 1691620 .. 1691642 -  -3.4  -5.00138   TATTCAAATTAAAAA           GCCATAAGAT TAT AACCTATGAC           TCTAGATTTTCTGGA  67 19
SAHC1340_RS08505 1691185 .. 1691204 -   -10  -5.48213   TATCCAAAATAAAAA            GCCAGTGC CGAA GCACTGAC             TCTTAACTATTACTT 100 112
SAHC1340_RS08500 NONE
SAHC1340_RS08495 1689234 .. 1689255 - -10.9  -4.53737   TAACATAAAAAAATA           GGCAAGTAC CGAA GTACCTGCC            AGTTACGCACATTTA 100 158
SAHC1340_RS08490 1688065 .. 1688099 -  -2.2  -5.41787   GAAAAAACACAAAAA    TAACCACAC-TCCTA AATTAA TAGGTGGTGTGGTTT     TGTTGGTTGTAGGGG  70 102
SAHC1340_RS08485 1687672 .. 1687700 - -11.9  -4.58395   TTTATGTTTGAAAAA        GCTACTTATTCTC AAT GAAAACAAGTAGC        ATTTAATAAATTAAT 100 40
SAHC1340_RS08480 1686684 .. 1686699 -  -3.4  -3.37198   TGTTTATATAGAATA              TTAAAA AGCA TTTTAA               AAAAAATTTATTCAT  49 33
SAHC1340_RS08475 NONE
SAHC1340_RS08470 1685481 .. 1685498 -  -2.7  -3.13722   GCCATTAAGATAAAT             TTTGCTT TTTT AAGCATA              TCTCATCACCTATTT  42 39
SAHC1340_RS08465 NONE
SAHC1340_RS08460 1684023 .. 1684051 -  -6.7  -3.39288   CATCTCGTAAGAATA        GGAGGATTATTGC ACA ACAAAAAACCTCC        ATCTTCTCCCATCCA  65 239
SAHC1340_RS08455 1683368 .. 1683401 -  -4.7  -4.96848   TGTTCTATAGAAAAA     GCAGGCAAGCTATC GTTTATT GATAG-TCACCTGC     TTTTTATTATTATGT  72 65
SAHC1340_RS08445 NONE
SAHC1340_RS08440 1680561 .. 1680572 -    -3  -2.66559   AATATACCCACATGA                CATA TGTT TATG                 TATATTTTTCAAAAT  42 110
        ebpS 1678956 .. 1679003 -  -3.9  -3.41125   GCTACATACTTATAA GCGCA-ATT-TAAGT-TCTCCAAA ATA TTTAGAGATACTTATAATATGCAC GTTTGTATATAGCAG  50 66
SAHC1340_RS08430 NONE
        ypdA 1677169 .. 1677179 -  -5.4  -4.17425   ACAAGCATTGGAAAA                 TGTC AAT GACA                 AACTAAATGTACCAT  66 502
SAHC1340_RS08415 NONE
SAHC1340_RS08410 1675695 .. 1675705 -  -2.6  -2.51133   CACTGACGCATTAAC                 TTTT ACC AAAA                 ATAAAAAGGCAACTT  40 10
SAHC1340_RS08400 1675171 .. 1675186 -    -4  -3.93004   ATAACATCTTATAAA              CTGACA GAAT TGTCAA               GAAATTCTACCTCGA  56 221
        rpsA 1673903 .. 1673930 -  -7.8  -4.11141   TGTTACATAAAAATA        CTCCACATGC AATCATAA ACATGTGGAG         TTGACTATTAAATAT  77 45
         der NONE
SAHC1340_RS08385 1671261 .. 1671276 -  -4.8  -3.30124   CCTGAGGTTTGATAA              TGATAT GTTT ATATCA               TTATGGTAAAACTTT  53 152
SAHC1340_RS08380 1670926 .. 1670952 - -12.5  -4.70319   GTATTAAAAGCAAAA         TAAAAAGCCCT TATTC AGGGCTTTTTA         AGTAAAATTATTTTA 100 33
SAHC1340_RS08370 NONE
SAHC1340_RS08365 NONE
SAHC1340_RS08360 NONE
         ndk 1667635 .. 1667683 -    -2   -5.5208   CTACAACATAAAAAA CGGGCCTTGTTATGT-A-TAATCA TAA TGACTAACCACATAACAAAACCCT TTCTACCTTTATAAA  70 69
SAHC1340_RS08350 1667045 .. 1667066 -  -3.8  -2.86514   AATTAAGAAAATGGA           TGACATCT CATTTT AAATGTCA            GAATTATCTTAATAT  46 277
        aroC NONE
SAHC1340_RS08340 NONE
        aroA NONE
SAHC1340_RS08330 NONE
SAHC1340_RS08325 NONE
SAHC1340_RS08320 NONE
SAHC1340_RS08315 1660127 .. 1660157 -  -6.3  -5.73339   ATAAGCACAAAAAAA      CTAGC-AACCACAC AAAA ATGTGATTAGCTAG       TTAATAAGTGTCTAA  95 67
SAHC1340_RS08310 NONE
        bshA NONE
SAHC1340_RS08300 NONE
SAHC1340_RS08295 NONE
SAHC1340_RS08290 1653227 .. 1653265 -  -9.8  -5.34309   ACGACCAAACAAAAA   TTCTTGTAACAGAACATA GCA CATGTCATGTCACAAGAA   TTTTACTTTGTATTT 100 40
        asnS 1651591 .. 1651619 -    -9  -4.44667   TTTTCCAAGAATAAA       TCGCCCAG-CTAT TAAT ATAGGCTGGACGA        TTCTTTTTATTATCA  88 72
SAHC1340_RS08280 NONE
         nth NONE
SAHC1340_RS08270 1649502 .. 1649529 -  -4.3  -3.39018   CTACGATTCGAAATA        GATATCTTAAA GCATAT CTCAAGATATC         CATTATGATGTAGAT  53 153
SAHC1340_RS08255 NONE
SAHC1340_RS08250 NONE
SAHC1340_RS08245 NONE
        gpsB 1644482 .. 1644494 -  -3.5  -2.50816   TTTGTATTTAGTAAT                TATTT ACC AAATA                CAGCTTTTTCTAAGT  43 12
        rnpB 1644000 .. 1644021 -  -7.3  -5.14563   CTTTTCATGAAAAAA           GCTCTCC ATCATCTA GGAGAGC            TAAACTAGTAGTGAT  86 43
SAHC1340_RS08230 NONE
SAHC1340_RS08210 NONE
SAHC1340_RS08205 1636002 .. 1636034 - -10.1  -4.77986   CCAAATACGCAAAAA      GACTATTTCTACC TTGTATC GATAGAAATAGTC      TTTTTATACTTAATT 100 71
         ald NONE
        tdcB 1633343 .. 1633355 -  -3.5  -3.04263   ACCTCATTTTTAAGA                TTAAA TGT TTTAA                CCTACCACACCCTTG  46 22
SAHC1340_RS08190 1631873 .. 1631902 - -10.2  -4.59109   TATACTTTTGAAAAA       CAGACAAATTCC ATAACA GAAATTTGTCTG        TTCCATAGAATAATT  93 122
        norB 1630355 .. 1630397 -  -6.6  -5.54885   AAGAGTAATAAAAAA CCAATCCCTATGT-TCATT TAAAAT AATGACACATAAGAATCGG TTTATATTTTTGTTT  91 70
         ebh 1598737 .. 1598771 - -16.6  -5.20331   AAAGAATAAATAAAA     GGAGCACCGACTGA TGTGATG TCAATCGGTGCTCC     TCTATTTATCAAAGA 100 47
SAHC1340_RS08155 NONE
SAHC1340_RS08150 NONE
SAHC1340_RS08145 NONE
SAHC1340_RS08140 NONE
SAHC1340_RS08135 1593353 .. 1593368 -  -2.6  -3.70307   TTTATTTAACAAATA              GAATAC AACT ATATTC               TCTATTTTCAATGAC  49 96
SAHC1340_RS08130 1591982 .. 1591999 -  -5.7  -3.09518   TGAAAACGTTTAACA             CAAAAAA GTAC TTTTTTG              CACTTGAAAATACTA  57 85
SAHC1340_RS08125 NONE
       fakB2 NONE
        msrA NONE
        msrB NONE
SAHC1340_RS08105 NONE
SAHC1340_RS08100 1588693 .. 1588731 - -10.5  -3.60627   TTAGTTTATTTTAAA   TTAAAACCAGGATAACG AATTG CATCACCCTGGTTCTAA   CTATTATTATTAAAA  88 47
SAHC1340_RS08090 1586983 .. 1587031 - -12.8  -5.09204   AGACGTCAATAAAAA TAAACACGCCTCCTAAAT-TGCTA TCT TTGCAAATTTAGGAGGCGTGTC-A TTAACATAATAATAA 100 65
SAHC1340_RS08085 NONE
SAHC1340_RS08080 NONE
SAHC1340_RS08075 1584414 .. 1584433 - -13.6  -4.31433   TAGCCGCAGAACAAA            CCACCCGT TCAC ACGGGTGG             TTTTGATTTTACTAT 100 41
SAHC1340_RS08065 1583314 .. 1583328 -  -5.8  -2.54276   ACTTGGAAGTAACAT               TTCATA ATG TATGAA               TTCAAAAGGAGTATG  55 87
SAHC1340_RS08060 NONE
        arlR NONE
        arlS 1580723 .. 1580750 - -12.2  -4.58395   TTTATCTGCTAAAAA        GAAGAATCAACA AAAG CGTTGATTCTTC         TAGGTTTATAGATGT 100 184
SAHC1340_RS08045 NONE
        sucB 1576449 .. 1576489 - -13.7  -3.34078   TATAAAAATAAAGTA CAGCAGTAAGAT-ATTTC GACTAG GAAATAATCTTACTGCTG  TTTGTTATTGATTTA 100 81
SAHC1340_RS08035 NONE
SAHC1340_RS08030 NONE
SAHC1340_RS08025 NONE
SAHC1340_RS08020 1571910 .. 1571922 -  -4.9  -3.84266   AGAGTCTATATGAAA                TATGT TGT ACATA                GCAGAAACAAAACAC  59 155
        brnQ 1570400 .. 1570441 - -15.6  -3.80279   TGTATAAATAGAGAA CAGCAGTAAGAT-ATTTTC TAATT GAAAATTATCTTACTGCTG TTTTTTTAGGGATTT 100 68
SAHC1340_RS08010 1568554 .. 1568579 -  -7.7  -3.55761   CATTGATGTCTCAAA         GAACATGATGA ACAG TCATCACATTC          ATATAGCTTGAAGTC  71 404
SAHC1340_RS07980 1565445 .. 1565460 -  -3.3   -3.1319   CTAAAATTCATTCAA              TATGC TTATTC GCATA               TTACAAAAAATACAT  46 147
        cspA 1565158 .. 1565179 -  -8.8  -5.05079   ATAAGCATATAAAAA           CACCTTAC TTCTTG GTAAGGTG            TTAGTTAAAATCAAT  95 57
         msa 1564389 .. 1564425 - -11.6   -3.8293   AAATAAACAAAGTAA    TCCCCGAAGCACAGAA AATTA TACTGTGACTCGGGGA    ATTTTTATGCATTAT  93 213
        cvfB 1551840 .. 1551859 -  -6.4  -6.11243   ATTGAATAAAAAAAA            CACGCATC CTAC GACACGTG             TAAAAATGATTATTC 100 35
SAHC1340_RS07900 NONE
        pstC NONE
        pstA NONE
SAHC1340_RS07885 NONE
        phoU 1546225 .. 1546260 - -10.6  -4.37544   GTAGAACAATATAAA    CCAAGATTTTCACATT ACTA ATTGTGAGAATCTTGG     TTTTTTTGAGGGTTT  91 96
SAHC1340_RS07870 NONE
SAHC1340_RS07865 1543606 .. 1543617 -  -4.4  -3.33708   CAACTTACATATTAA                GAAC TAAC GTTC                 ATTATAGTATTATCC  53 103
SAHC1340_RS07860 NONE
SAHC1340_RS07855 NONE
SAHC1340_RS07850 NONE
SAHC1340_RS07845 1540129 .. 1540139 -  -2.6  -2.61728   ACTTGCAATATCAAG                 TAAT CCC ATTA                 ATGATACTCCTTTTT  40 147
SAHC1340_RS07840 1539620 .. 1539660 - -11.3  -5.42975   TCATATAAATAAAAA  CACCCCTATCAAATGATAA TCA TTATCAATCGATAGGGGCT  ATTTTAATAAAATTC 100 29
SAHC1340_RS07780 1525826 .. 1525836 -  -2.6   -4.0371   CATTTCGCAGATAAA                 TTAT GTA ATAA                 ACAAGCACTATATCG  53 397
SAHC1340_RS07770 1524386 .. 1524444 -   -15  -2.51547   TTTTTAGATGAAGAT TAAAAATAAACAAGGCGATTTCTATC ATACTCA GATAGAAGTCGCCTTGTTCGTTTTCA AAGAATTAATTGGCA 100 57
        msrA 1522641 .. 1522679 - -12.7  -5.28778   ATGATTTATAAAAAA   CGGTACAGATAAGAA TATTTAAGT TTCCTATCTGTACCG   TATTTTAATATTGAA 100 105
        plsY 1509889 .. 1509927 -  -5.5  -5.26119   TTTGCAAAAATAAAA  TAATCCATCAACTGCAAA AAAA TATGCAAT-GATGGACTA   ATGTCAAAAAATTGT  80 40
SAHC1340_RS07710 1509155 .. 1509167 -  -3.4  -3.66784   TTAGCGTGAAGATAA                GCTA ATATA TAGC                AAAAACGAACTTGTT  50 128
        mscL 1502379 .. 1502392 -  -3.8  -4.30177   CATTAGATCAAGAAA               CGCT TGAAAC AGCG                TTAGACACTTTATTA  62 240
        lexA 1493521 .. 1493549 - -13.3  -5.14682   TTAGAATAAATAAAA        CCTCTTGAAAACG TAA CTTTTTCAAGAGG        TCCAAAATTTATAAA 100 85
SAHC1340_RS07610 1486870 .. 1486906 - -13.1  -4.79223   TTACACCATTAAAAA    GCGGCAAATGCTATAGA TAA TCTAAAGCATCTGCCGT    ATGAGAATTTATTTA 100 38
SAHC1340_RS07605 NONE
SAHC1340_RS07600 1486107 .. 1486150 -  -7.7   -4.2354   TAAATTTTAAAATAA GCCTTAA-CACATGATATTT GAATA AGATATCTTGTGGTTAAGGC TTTTTATTTTTGTGA  77 262
SAHC1340_RS07575 1480350 .. 1480389 -  -8.1  -5.23396   AATAATTAAGAAAAA  GCAATTCATAACGCA-GT TGAAT ACATGTGTTACGAATTGC  TTTTATATTAGTTTT  93 33
SAHC1340_RS07565 1478148 .. 1478158 -  -6.8  -3.91144   TTGATACGCCAGAAA                 CGGT GAA ACCG                 AATACGCCTGTACAA  69 450
SAHC1340_RS07555 1477346 .. 1477364 -  -3.2  -4.35958   GTAGTAAAGAAATAA             GTGAAAAA TTA TTTTTGAC             AGATGGAACAGTTAG  60 241
SAHC1340_RS07515 1469469 .. 1469497 -    -4  -5.24647   ATATATAAAATAAAA       CAAGATACT-CAA TAAT CTGTAGTACCTTG        TTTTGGAATAATGTA  74 155
SAHC1340_RS07390 1454905 .. 1454954 - -13.2  -5.06414   TGTTTGTAATAAAAA CGCTTCATATAAAGGTCGAGTCA ATATA TGATACGAC-TTTATATGAAGCG TTTTATTTGCTATGA 100 52
SAHC1340_RS07305 1435299 .. 1435327 - -17.7   -5.4833   CTATCCAATAAAAAA        GAAGAGAAGATGT AAC ACATCTTCTCTTC        TGCAATATTAATTAG 100 60
        yfhO 1377989 .. 1378021 -  -7.2  -5.42975   TTATATAAACAAAAA     TCTACTAAGTGCCAT TGAA AAGG-ACTTAGTAGA      TTTATTAAATATATG  95 51
SAHC1340_RS06970 1358806 .. 1358831 - -10.6   -5.7946   TTGGTAACAAAAAAA         GAACTAAGAG GTTGAG CTCTTAGTTC          TTAAGTAAATGTGTC 100 80
SAHC1340_RS06920 1348889 .. 1348901 -  -4.9  -2.93623   TTCTTTAAAATAGTA                TTTAC TGT GTAAA                AAATAAATAGTGTAC  51 173
SAHC1340_RS06890 1340727 .. 1340774 - -15.3  -4.60258   GCATTAAATAATAAA TAAACACCTCACCATAAGAAAG GACTA CTTTCTTTTG-TGAGGTGTTTA TTTGTCGACAACTTG 100 42
SAHC1340_RS06730 1305565 .. 1305602 -  -4.3  -5.10029   AGTAATTGTAAAAAA   GACACTACGAA-AAGA TGCATTT TCATGCTCGTAGTGTC   GAATATTATTATCTT  73 39
SAHC1340_RS06710 1303485 .. 1303504 -  -9.3   -5.4148   TAAATAATTAAAAAA            CCACGTC TCGATG GACGTGG             TTATTTTTTTTAGAT 100 446
SAHC1340_RS06700 1301996 .. 1302033 - -15.1  -2.92091   AGAGGCATTGATATA   CACTAAAAAGAGGCAAG ATTA CCTGCCTCTTTTTAGTT    ATTAAATATACGTGT 100 59
SAHC1340_RS06675 1296342 .. 1296357 -  -4.8  -2.73123   AAAAGGGGTTAATTA              GATAAT TGAA ATTATC               CGCATTTACAAAAGG  50 48
SAHC1340_RS06670 1295462 .. 1295474 -  -3.4   -3.2059   ACTCATTAGAACATA                TCCT TTCAG AGGA                ATCATGATACGAGGA  47 111
SAHC1340_RS06665 1294287 .. 1294325 - -14.9  -3.51202   CATTAAATGAAGGAA   TAGAGCCTAAGACAT AATAAATCA ATGTCTTAGGCTCTA   CAATATTATATTGGT 100 436
         hyl 1292013 .. 1292032 -    -8  -4.58283   TAATGTGTTCAAAAA            GTTTTGAA CAAT TTCAAAAC             TTTTATATAAAGGGT  82 269
SAHC1340_RS06645 1291483 .. 1291495 -  -4.9     -3.94   TTAATGTTGAAATAA                TTAGA TTA TCTAA                TTTTCATTTGCTTTA  61 96
SAHC1340_RS06635 1290698 .. 1290742 - -14.8  -3.13728   ATTAGCTACAGCTAA TGATAAAGAACCACTACATAA TAAA TCAT-TAGTGGTTCTTTATCA TTTCTATCTCACTCT 100 42
SAHC1340_RS06605 NONE
SAHC1340_RS06600 1286563 .. 1286576 -  -5.3  -4.00791   AAGTAAATAAAAAAG               TTGTG GATG CACAA                AAAGCTGTAAACTTT  63 495
SAHC1340_RS06550 1277675 .. 1277699 -  -5.9  -3.61015   AAAGCAACAAGAATA          CATTTCAAACA TGT TATTTGAAATA          AGCATAAAAATTGAG  62 493
SAHC1340_RS06520 1271217 .. 1271264 - -10.2  -3.73386   AGATAATGATTTAAA CCCCATGTATAAGGATATC TGAAGTAGATT GATATCCCTA-ACATGGGG TTTTATTTTTGGGTT  89 139
        isdA 1260140 .. 1260181 - -11.3    -5.626   TATTTTATAAAAAAA TAACCTATGTTATAGATTAT GAA AT-ATCTATGACATAGGTTA AATAAAATTTAAAAT 100 75
        isdB 1257970 .. 1257998 -  -6.1  -4.82756   ACACAACCAACAAAA       CCACACCACCTA TTAATT TAGG-AGTGTGG        TTGTTTTTGTTGGAA  80 118
SAHC1340_RS06235 1224609 .. 1224619 -  -5.4    -4.431   CACTTAGCTACAAAA                 CAAG CGA CTTG                 CTGAAACAAGATAAA  69 423
SAHC1340_RS06200 1221550 .. 1221591 - -14.6  -4.60143   ACACACTATACAAAA CAACCCTCCTCATCACAA TGGCAG TTGTGACGTGGAAGGTTG  TAAAGATTGAGAAAA 100 116
SAHC1340_RS06170 1218348 .. 1218363 -  -3.4  -3.31515   AAAGATTTTTCATAA              TTTAAT TTCA ATTAAA               AAGCCCCTTTGTTAC  47 37
SAHC1340_RS06165 NONE
SAHC1340_RS06160 NONE
SAHC1340_RS06155 1216084 .. 1216107 -   -11  -5.63504   AATTGTATAAAAAAA          GAGAGAGCGC AGAT GCACCCTCTC           ATGTCGCAAATATTT 100 137
SAHC1340_RS06150 1214533 .. 1214564 - -10.3  -5.10767   TACTCAATATAAAAA      GTCCCGCTTAAAA TGATTG TTTTAAGTGGGAC       TTTTTATATTGTGAA 100 88
SAHC1340_RS06130 1212382 .. 1212423 -  -9.7  -4.67357   AAGTAATAAAAATAA CAGTATTTTAGGTTTATCA TGGT TTACAATCCTAAAATACTG  TTTTCATTTGTTAAC 100 36
SAHC1340_RS06115 1210683 .. 1210718 -  -4.8  -3.57715   AAAACATATGAAACA    TGAACGACAAATCC GAAAATAT GGACATATCGTTCA     TTCAAATAGAGATCG  57 194
SAHC1340_RS06105 1209424 .. 1209440 -  -6.6  -3.52117   TCGAGTCAGAAAAAG              GTGGTT ATTGA AACCAC              TAACTAGCATCTGAC  66 50
SAHC1340_RS06075 1204793 .. 1204827 - -17.5  -5.38047   TATTGATATAAAAAA     CCGTAATTTTAATGG GCGTG CCATTAAAATTACGG     TTTGCTTTTTTGTTA 100 38
SAHC1340_RS06055 NONE
SAHC1340_RS06050 1197963 .. 1197996 -  -8.2  -4.90381   TTTAACATAATAAAA     GAGAAGCTGAGCGA TGAAAG TTGCTTAGCTTCTC      TTTTGGCATATAATA  91 80
SAHC1340_RS06040 1195663 .. 1195702 -  -8.8  -4.40037   AAATAATTACCAAAA  GCGTAATATGTAGTCCTAA CAA TTAGGTA-ACATATTACGC  TTTTATACCTTAAAT  83 130
SAHC1340_RS06030 1194003 .. 1194034 -  -5.9  -5.54885   AATATTAAGAAAAAA      GAGCACGAAATCA TGGATG TGATTAAGTGCTC       TATTATTTAAACAAA  86 46
SAHC1340_RS06025 1192460 .. 1192510 -  -5.9  -5.52079   ATAGCAAAAGAAAAA CCATTAAAATGTTAAGTTGT TAATTATTAGAT ACAACC-AACATTTTAATGG TTTTATTTTTAACTT  86 34
SAHC1340_RS05955 1179082 .. 1179108 -  -7.4  -4.67038   GTTGTAAAAGGAAAA         GCTTAGGACA TCATATT TATCCTAAGC         TTTGATAATTAGAAA  81 49
SAHC1340_RS05950 1178660 .. 1178672 -  -2.7  -4.62069   CTGCCATGTTAAAAA                TTCCT CCT AAGAA                TGTTTGTTTAATTTA  58 33
SAHC1340_RS05945 NONE
SAHC1340_RS05940 1176572 .. 1176584 -  -7.7   -5.1925   CTAGAATTGAAAAAA                GCTTG TTA CAAGC                GCATTTTCGTTCAGT  91 177
        nrdH 1172581 .. 1172619 -   -12  -4.63526   AGAATTATAAATAAA   CCCGAAGTATTCAT TGTAAGTAATT ATGAATACTTCGGG   TTCTTTTTTATGATT 100 190
SAHC1340_RS05885 1166597 .. 1166625 - -14.7  -4.45485   AGCACATGCATAAAA        TCCCCTAACAACT AAA AGTTGTAAGGGGA        TTTAAATTAATTTAG 100 32
SAHC1340_RS05875 NONE
SAHC1340_RS05870 NONE
SAHC1340_RS05865 1163126 .. 1163176 -  -7.1  -4.69326   ATATGTAATACAAAA GAGGCGCCAC-AACATGTTT GGATGAACAAAA TAACATGTTTGTGGCACCTC TTTTGTTTAGTATGG  81 108
        folD 1150382 .. 1150440 - -12.7  -3.03661   GAGCCAAGTACAAAG TGAAATGCTCCCTTCAAAGCCTTCATT TATTC AATGTCTACTTTGAAGGGAGCATTTGA TCGATTAATGTCCCA 100 284
SAHC1340_RS05800 1149513 .. 1149559 - -17.1  -3.85209   ATGAAGTTAGAATAA CAAATAAAATGGTAGCAAAACA TGTT CGTT-TGCTACCATTTTATTTG CAGTATAGTGATGAG 100 43
        qoxA NONE
        qoxB NONE
        qoxC NONE
        qoxD 1144984 .. 1145007 -   -14  -5.54338   GAAGGAAAATAAAAA          CCAGCTAACA AAAG TGTTAGCTGG           TTAAACTTTACATTA 100 53
SAHC1340_RS05765 NONE
SAHC1340_RS05760 1141067 .. 1141102 - -15.1  -5.43414   ATTAGACATAAAAAA    GCTATAAAGATGATT GTTGTG AATCATCTTTATAGC     TAATTAATTATTAAT 100 42
SAHC1340_RS05755 1140504 .. 1140522 -  -4.6  -3.96148   TTGGTTTATTACAAA             TGTTTCTA AAA TAGATACA             ACTTTTTTTAATTAA  59 33
SAHC1340_RS05750 1136710 .. 1136761 - -16.1  -5.28176   TGTATGTATAAAAAA GGGATCAAAGGTCATCCCCCA TGATTGATAG TGGGGGATGACTTTTGATCCT ATGTTCATGTTGCTT 100 39
SAHC1340_RS05735 1134855 .. 1134867 -  -2.7  -3.35022   AATAATATCATAACA                TACTT TTA AAGCA                AAAAAGGGTAAATTA  45 144
SAHC1340_RS05730 1133195 .. 1133224 -  -6.7  -5.67711   TAAATAAAATAAAAA       GTTTTTGTAAA GATTAGAG TTTACAAAAAC        ATTAAGGGAATTAAA 100 437
        sspA 1132086 .. 1132102 -  -6.7   -3.2794   TTTTATCTAGACGAA              CTTAATT GTT AATTAAG              CTGCATCTGGATTGT  63 21
        sspB NONE
        sspC 1130406 .. 1130439 -  -9.6  -5.33848   ATTACAATGAAAAAA     CGAGCTGGTGAGAA ATTGAA TTCTCGCCAACCCG      CTTTATGAAGTGAAA 100 54
SAHC1340_RS05690 1124438 .. 1124468 -  -2.6  -5.95539   TGTTAAATAAAAAAA      CTCGACAGTTCGA TGTAAG TCGAT-TGCCGAG       TAGTATCATTTTCTA  82 41
SAHC1340_RS05680 NONE
SAHC1340_RS05675 1123264 .. 1123302 - -11.8  -5.56372   AAAGCAAAATAAAAA   TACAGCGCTACTCGTAAA TCA TATAAGAGTGGCGCTGTA   TTTTTAATTATGTTT 100 29
SAHC1340_RS05665 1121442 .. 1121458 - -10.9  -5.90231   ATAAATACAAAAAAA              GAGAGGA TAG TCCTCTC              AAACAATAGTTAATA 100 35
SAHC1340_RS16170 1118965 .. 1119021 - -11.2  -4.90471   ATCCAAAAGATAAAA TTAAAAGCCAATCAATGGGAAATGTTG ACTT CAACA-CTCCGTTTGATTGGCTTTTAT ACTGTGTTACTAAGT 100 40
SAHC1340_RS05610 1112654 .. 1112691 - -10.9  -4.56093   AACGCAATCATAAAA   GGACTATTCTTAACATCT CAT ACATGT-AAGAATAGTCC   TTTAATCGTTTATGA 100 35
SAHC1340_RS05600 1111622 .. 1111641 -    -3  -4.52502   TTTAAAAATAAACAA            TTTATTTA TCTT CAAATAAA             GAATAGCGTGTCAAT  60 7
SAHC1340_RS05595 NONE
SAHC1340_RS05590 1111284 .. 1111309 - -13.5  -5.72053   TAAGTAAACAAAAAA         GCTAAAATGGT ATAT ACCATTTTAGC          AAGTAACGGAAACGG 100 32
SAHC1340_RS05550 NONE
SAHC1340_RS05545 1098332 .. 1098375 - -18.7  -3.81146   TGTTTGAATTAATAA GAAAATGGTCATTTTTATT GAATGT AATAAAAATGACCATTTTC TTTATTTTAAAATAC 100 50
SAHC1340_RS05525 1093619 .. 1093654 - -11.3  -5.64274   TTATGCACAAAAAAA    TCGCCTCAAAAGCTG TAGTTT CAACTTTTGATGCGA     TAGTATCTTATATTC 100 60
SAHC1340_RS05475 NONE
SAHC1340_RS05470 NONE
        yjbH 1083062 .. 1083091 -  -7.3  -4.76644   AAGAGTCAGTAAAAA       GACCTCGTTACA TTTATGG TGTA-CGAGGTC       TTTAATTTATTTATT  81 36
        trpS 1076879 .. 1076904 -  -9.8  -5.00196   CGTTAAATAATAAAA         GAGGCACTAG TTAATT CTAGTACCTC          TTTATTTTATCTCTT 100 32
SAHC1340_RS05385 1064714 .. 1064744 -  -8.5  -5.01535   GCATAACTATAAAAA       TCTTCAGTAAC GTTGTTTTA GTTACTGAAGA       TTTTTTCAGTTTCTT  95 40
SAHC1340_RS05370 1061966 .. 1061985 -  -4.2  -5.26119   TGGCCAAAAATAAAA            GCCGCC TTTATCTG GGCAGC             TTCAATAATAAGAAA  74 67
SAHC1340_RS05335 1055283 .. 1055313 - -11.3  -3.46236   ATGAATAAAATTGAA       CCAAGAATGTGAT GATTA ATCGCATTCTTGG       TTTTTTAGATTTGAA  93 46
SAHC1340_RS05315 NONE
SAHC1340_RS05310 1047413 .. 1047437 -    -8  -5.56264   GTTAAACATAAAAAA         TGGACTGGATA GTAG TA-CCAGTCCA          ACATAATTCTAACCT 100 76
SAHC1340_RS05265 NONE
        argH 1031915 .. 1031949 -  -8.8  -4.34947   AAGAGAGCATTAAAA     TACCCACAATGT AATTTTAATAG ACATTGTGGGTA     GGTAGATTAACGTAT  83 41
SAHC1340_RS05255 1030700 .. 1030740 - -11.3  -3.91506   CCACTCCCAAAAAGA  CAGCAGTAGGATAATTTCA ATT TGGAAATATCTTACTGCTG  TTTTTTATAGTAATA  95 79
SAHC1340_RS05225 NONE
       mnhA1 NONE
       mnhB1 NONE
       mnhC1 NONE
       mnhD1 NONE
       mnhE1 NONE
       mnhF1 NONE
       mnhG1 1018313 .. 1018354 -   -14  -5.10163   AATGTCAAAAGAAAA CAGCAGTAAAATCATTCC TAATTT GGAATCATCTTACTGCTG  TTTGTTGTTGATTTA 100 64
SAHC1340_RS05185 1016940 .. 1016984 -  -4.5   -4.6313   TTTAAAATAAAAGAA CTGCTAGCTGAAATGTTATGA GATAT TCATAAC-TA-CGGCTAGCAG TTTTTTTATGCGCTA  68 31
SAHC1340_RS05150 1009516 .. 1009547 -  -8.9   -4.5464   TACACATAACTAAAA      GCAATGTCAGT AATAGTGTGA ACTGACATTGC       TTTTTAATTTTAACC  88 35
SAHC1340_RS05140 1008572 .. 1008623 -  -8.4  -4.78661   ACCTAAAAATTAAAA TACAAATAGCACATA-ACTCAACGA TTT TGATTGAGCGTATGTGCTATTTTTA TATTTTAAATTTCAT  90 234
SAHC1340_RS05090 1001200 .. 1001214 -  -4.3  -4.36554   GATGACGACAATAAA               CTTCA AGATG TGAAG               ATTAAGCCAACCATT  64 137
SAHC1340_RS05045  993436 ..  993451 -    -9  -5.29716   TGAATATAACAAAAA              GCCACA TTAC TGTGGC               TTTTTTTGTTTTATA 100 260
SAHC1340_RS05010  986331 ..  986344 -  -3.1  -4.40333   GGTAAAGAAGATAAA               GCTTC TGGT AAAGC                GAAAGAATTCGTTGA  60 334
SAHC1340_RS04910 NONE
SAHC1340_RS04905  972619 ..  972633 -  -2.9  -4.35116   CATGCGACATGAAAA               GTTAA TGATT TTAAC               GTTGTCGGTGTATTA  57 237
SAHC1340_RS04845  964636 ..  964646 -  -3.2  -3.03741   ATTTAGAAGGAGATA                 TGCC TAA AGCA                 CCACGTAAAAATAGA  45 211
SAHC1340_RS04830  962693 ..  962714 - -11.7  -4.80737   GAATAGAAAAAATAA           CCAACCAAA AATT TTTGGTTGG            CAAATTTGAATTTTA 100 85
SAHC1340_RS04825  961795 ..  961819 - -10.1  -5.69793   ATATCAAATAAAAAA          CAACTACTCAA TAG TAGAGTAGTTG          TATGAAAAATAGAAC 100 87
SAHC1340_RS04820  961045 ..  961083 -  -9.1  -4.73677   TTTATAATAAATAAA  GCGTTATAC-ATAGACAC AAGT ATGTCTTTTGTATAACGC   TTTTAAAATACAACT  93 51
SAHC1340_RS04810  959695 ..  959716 - -10.3  -5.60864   CAGATATCAAAAAAA           TGTGCAAAA TCAC TTTTGCACA            TTTACAAATACTAGT 100 303
SAHC1340_RS04800 NONE
SAHC1340_RS04795  958924 ..  958956 - -15.8  -5.66229   ATTAAGAATAAAAAA      CAGTCTGAAACATC ATTGA GACGTTTCAGACTG      GATATAAAATGAATT 100 45
SAHC1340_RS04790  957523 ..  957539 -  -3.7  -3.65314   TGTAATCTTTAATAA              GAGTC AAGTCCA GACTC              CTGTGTAAAATGCTA  50 60
SAHC1340_RS04785  956895 ..  956906 -  -4.4   -3.6279   AAACTGTGTTAATAA                GCTT TAAC AAGC                 CTTAGTTTGTATGGA  55 7
SAHC1340_RS04780 NONE
SAHC1340_RS04775  955890 ..  955929 -  -8.1  -4.64861   TGGTTCTAAAATAAA  TCGAACTGATGGAAAAGT TTTTT ACTTTT-CATCTGTCCGA  CTTTTGATTTTGAAT  87 332
SAHC1340_RS04765  953866 ..  953887 -  -4.4  -4.13945   ATGCTCATTGTAAAA           GTGTCACT GCTGCT AGTGGCAC            TTTTATAATTTTTAG  61 309
SAHC1340_RS04710  942582 ..  942623 - -16.3  -5.39755   TATAACTATAAAAAA TAGCTATGAAAAAATCTAT CGTC ATAGATTCCTTCATAGCTA  ATCTTAGTATGTTTA 100 44
SAHC1340_RS04635  926238 ..  926279 - -16.9  -2.92246   TGAACCGTAACTATA TGAAATGTTCCCTTCAAAG TAGA CATTGAAAGGAACATTTCA  ATCCTTTGTTTGTAA 100 101
SAHC1340_RS04510  899449 ..  899460 -    -3  -2.96767   AATAGGGAATGAAAG                CATA GCTG TATG                 GGATAATTTGTATTA  44 173
SAHC1340_RS04500  896932 ..  896983 -   -10  -5.38549   TTTAAATAAGAAAAA CTGTTAATC-TTTGCTATTAT ACTATGATTTA ATAATAGCAAAGGATTAACAG TTTTGTCGTTGTTAT 100 37
SAHC1340_RS04495 NONE
SAHC1340_RS04490 NONE
        pepT  894203 ..  894234 - -10.3  -5.04265   AAAAAATATGAAAAA      TCACGCTATCATT GCACTG AATGTTAGCGTGA       TTTTTATATATTAAT 100 77
SAHC1340_RS04465  890544 ..  890557 -  -2.3  -3.89837   TATAATTATAAAATA               CGGCA TTAT TGTCG                TTATAAGTATTTTTT  50 26
SAHC1340_RS04460 NONE
SAHC1340_RS04455  888868 ..  888908 - -17.1  -4.26634   AAAATAATTTTAAAA  GAGGGGAACAATGGTTAAA GGT CTTAATCATTGCTCCCCTC  TTTTCTTTAAAAAAG 100 293
SAHC1340_RS04405 NONE
        queF  878536 ..  878572 - -13.3  -4.99134   ATGCTAAATGAAAAA    CACACCAATAAGTTA GGAAAAT CAACTTATTGGTGTG    TTTATTAAATGATAC 100 43
SAHC1340_RS04395  876695 ..  876720 - -11.3  -5.68039   AAACCTATAAAAAAA         CAGTAAGCCAT TTAA ATGACTTACTG          TTTTTTGAATTAGGC 100 49
SAHC1340_RS04385  875104 ..  875121 - -11.3  -3.27907   CTACAGACAATGCAA             GTTGGGG TGGG CCCCAAC              ATAAAGAAATACTTT  93 461
SAHC1340_RS04305  857219 ..  857247 -    -6  -5.26875   TTTTGAACCAAAAAA        TCGAAGGCACCC GTGAA AGATGTCTTCGA        TTTTTGTTTTTTTTG  84 65
        queC NONE
        queD NONE
        queE NONE
SAHC1340_RS04285  854549 ..  854600 - -14.9    -3.376   CTGAACTAGATAACA CTATAAAACACTTCTGATATTTT GAACTA AGAATATCAGAAGTGTTTAATAG TTTTGGTATTAAAAT 100 34
SAHC1340_RS04280  853756 ..  853794 -  -4.9  -4.43669   ATTGAAAAAAGGAAA  GTATGATTTCTACAAGC TAGGGGG GCT-GT-GAAATCATAC  GCTTTCCATTGAGTA  65 120
SAHC1340_RS04275 NONE
SAHC1340_RS04270 NONE
        saeS  851296 ..  851319 -  -7.4  -6.11392   AAATAAACAAAAAAA          GAAGCCCTCA TTAA TGGGAGCTTC           TTTTTAGTCTTTGCA 100 64
SAHC1340_RS04205  838836 ..  838852 -  -3.1  -2.71593   ATAGTTATAAACGCA              TTCAATT CCT AATTAAA              AATTTAATTTAACTC  42 131
SAHC1340_RS04190  836461 ..  836494 -  -9.8  -4.24283   AAGCAATATAAATAA     GCCAATTTCTATTA TTGATG TGATAGAAATTGGC      TTTCCTCAAATATAT  91 73
        mgrA  830042 ..  830073 - -12.4  -5.66684   TAATGCATAAAAAAA      CTGCTTGATAGGCT AAGA AACCTTTCAAGCAG       TTTTTTAACTAACAA 100 115
SAHC1340_RS04145  825592 ..  825621 -    -8  -5.31072   AGAAGACAATAAAAA       CTGCCAATCAAG TGATTC CTTAATTGACAG        TCTATATTTTAAAAG  93 45
SAHC1340_RS04140 NONE
SAHC1340_RS04135 NONE
SAHC1340_RS04130  823687 ..  823729 - -12.3  -4.21989   CATAAGCGTAACAAA CACCCCTAACATTGTTTAGC TGAT GATAA-CAATATTAGGGGTG TTTGTTTATTTTTTA 100 53
SAHC1340_RS04105  820727 ..  820744 -  -5.7  -3.36785   GTATAGCTCAAGCAA             TCATTAT GTTT ATAATGA              TTGTATGGTTCTTTA  57 162
SAHC1340_RS04045  810172 ..  810201 - -11.7  -5.93252   TTCAAAAATAAAAAA       CTAGCAATCTCACA TGA TGTGA-ATTGCTAG       TATATATCAGTACAA 100 50
SAHC1340_RS04005  801026 ..  801081 - -10.9  -3.24158   ACTAAACAACATATA TAAAGCACCACTAAT-CGTAGTTGAT AGTTA ATCAATTACACATTAGTGGTGTTTTA TTTTGAATTTAAATT  90 168
SAHC1340_RS03925  785172 ..  785210 -  -7.5  -4.95487   AAAATAAATATAAAA   CGGACAAGTTTCGCA GCTTTATAA TGTGCAACTTGTCCG   TTTTTAGTATGTTTT  88 39
        tagH  780008 ..  780034 -  -5.2  -4.18488   ATGCATTGCAACAAA         GATATCCAAACA TAT CGTTTGCACATC         ATCACGGTTATATTG  66 424
SAHC1340_RS03890  778467 ..  778488 -  -7.5  -3.73435   AAATGAATAAAGTAA           TTATCATTA AACG TAATGATAA            TGTAATTATTGTCAG  73 157
SAHC1340_RS03880 NONE
SAHC1340_RS03875 NONE
SAHC1340_RS03870  775207 ..  775223 -  -5.2  -4.07687   ATGTGTGGCCTAAAA              TATTGG AGATA CCAATA              TTTTAGGTTGCATCA  65 77
SAHC1340_RS03820 NONE
SAHC1340_RS03815  764910 ..  764944 -   -10  -4.81814   ATTATTACAACAAAA     TCACCCTAGACAATCA TGA TGAAAGTCTAGGGTGT     TAGTATTTATACTAA 100 63
SAHC1340_RS03810  763857 ..  763873 -  -3.1  -3.39352   TAAGCTAAAAGTTAA              TTTAAAA TAA TCTTAAA              AGTATAATGCCTGTC  47 10
SAHC1340_RS03805  762480 ..  762515 -  -6.4  -5.70829   AAGAGCATAAAAAAA    GGAAGTTTAATAGAATG TAT CAT-CTATCAAACTTCA    CCAAATTGCGCTAAA  95 46
SAHC1340_RS03665 NONE
SAHC1340_RS03660  737715 ..  737749 - -12.3  -3.30967   AGCACAACAATAAAG    CCTGATGGCA-GCATC ATTC AATGCGTGCCACCAGG     TTTTTATGTTTTGTC  95 40
SAHC1340_RS03625  730805 ..  730832 - -11.5  -5.08367   AAGATAAACGAAAAA        TTCCAAGCTTA AACCGA TAAGCTTGGAA         TTTTTTTATTAATTT 100 58
SAHC1340_RS03620 NONE
SAHC1340_RS03615  728952 ..  728998 -  -5.2  -5.03961   AACTAAATAATAAAA GAATCGCACAATAAACCTTC TTCATTC GGAGGCGTATCGTGCGATTT TTTGTATTATAAATT  77 115
        thiD  724706 ..  724755 - -15.3  -5.67967   ATGATTATAAAAAAA TAACCACATCACATAAATTGAGT TCAT ACCCAATTTAAGTGGTGTGGCTA ATAATGTTGATTTAT 100 59
SAHC1340_RS03585  723892 ..  723911 -  -4.4  -5.52079   AGATTAAAATAAAAA            TTTCTTTG AGCA CAAAAAAA             TAACCGATATTAGCT  78 229
SAHC1340_RS03535  714892 ..  714911 -  -2.1  -3.21378   GAAATATTACTAATA            CATGTCT TTCGTC AGTCATG             TTGATGCCTCCTCTA  43 38
       bshB2 NONE
SAHC1340_RS03525  713314 ..  713333 -   -10  -5.21236   AAGGTATAATAAAAA            CGCGCAAC TAAT GTTACGCG             TTTGAATTAATCATA 100 46
SAHC1340_RS03520  711566 ..  711584 -  -3.2  -4.57569   CTATTTTTGTAAAAA             TAAAGGTA AAG TACATTTA             TATAAGACGAACAAA  60 23
SAHC1340_RS03480 NONE
SAHC1340_RS03475 NONE
SAHC1340_RS03440  685653 ..  685701 - -14.8  -4.16943   TTGGACATTGTAAAA TGCTCCCTTCAAAGTTTTCATT TTTTC AATGTCTACTTTGAAGGGAGCA TTTCATTAGTTTATG 100 75
SAHC1340_RS03295  652689 ..  652700 -  -2.2   -5.9218   TACATAAGAAAAAAA                CCCT TCAA AGAG                 ACTGAGAATAGTCAA  77 77
SAHC1340_RS03280  649553 ..  649579 -  -7.5  -2.92701   AAAGGAAATTAATTA         TTATACAATAG ACAAG CTATTGCATAA         GTAACACTAACTTTT  66 53
SAHC1340_RS02910 NONE
SAHC1340_RS02905 NONE
SAHC1340_RS02900  579321 ..  579358 -  -5.8  -4.82667   TTACTATAGTAAAAA  GCGACCTAGTGAACA-AT TGAC ATATATCCAC-AGGTCGC   TTAACTTAAGTTATA  78 54
SAHC1340_RS02885  577879 ..  577920 -  -5.5   -4.8048   TTTGTATATGAAAAA GGATTGGTCG-A-AT-GAAC TTCAT GTTCTATGTTCGACCAATCC TTTTCTGAATTAGTA  73 35
SAHC1340_RS16010  567428 ..  567440 -  -3.3  -3.53444   GTATGCTTGGTTAAA                CAGCG CAA CGCCA                TATATTTGGGTGTGC  50 184
SAHC1340_RS16680 NONE
SAHC1340_RS16675 NONE
SAHC1340_RS16005 NONE
SAHC1340_RS16670  561658 ..  561683 -  -9.7  -4.21322   TCAACACAAAGCAAA         GCCACCATCCC TATT GGTATAGTGGC          CTGAGAATTTTAAGT  88 45
SAHC1340_RS02800  559287 ..  559297 -  -5.4  -3.54408   TCCCATGTAAAGTAA                 TTCG AAC CGAA                 TCGAAATATCACACT  59 203
SAHC1340_RS02775  554716 ..  554730 -  -2.8  -3.50251   TGAACAATTAAGGAA               GCGATA TAA TATCCC               GACGCAAAAAGCGCC  47 348
         spn  547402 ..  547460 -  -4.2  -5.03713   AATAATTAAATAAAA CAGCTTAATGATGTAATGAAATTAGTGA GTTAA TCACTGACTTC-T-ACGTCATTGAGCTG TTTTTTTGTGCTTTG  71 60
SAHC1340_RS02705  541774 ..  541785 -    -3  -3.78409   TGAAGTTAACTTAAA                GTAA ATCA TTAC                 GAATAATTAAAAGTA  51 102
SAHC1340_RS02640 NONE
SAHC1340_RS02635  529158 ..  529183 -  -7.6   -3.9941   TTTTCTATAAGGAAA         CAGAGGCAAC GCTACT GTCACCTCTG          CTTGAAATAATTAGG  75 130
SAHC1340_RS02630  528385 ..  528398 -  -3.9  -3.44686   CTTAATTTAACAATA               TCTAT TCTC ATAGA                ATTTGTTCAATTAAG  50 239
SAHC1340_RS02625  527778 ..  527794 -  -2.3  -4.46926   GATGTTACTATAAAA              CCAACAA TTT TTATTAG              GTGGAACTCATCAAT  57 310
SAHC1340_RS02620  526850 ..  526877 -  -9.2  -5.72616   ATTTATATAAAAAAA        GAGGCCAGATGA CGTA TCATCTGACCTT         CAGCTAAAACGCTGA 100 124
SAHC1340_RS02615  525950 ..  525969 -  -7.8  -4.87592   TTATATATAATAAAA            CCACCTGT TTGC ACGGGTGG             TTTTTAATTTGAGTA  88 103
SAHC1340_RS02605 NONE
SAHC1340_RS02600  520183 ..  520202 -  -9.3  -4.34482   TTGGGTAAAAAAATA            GACGCTC CGTACT GAGCGTC             CGATTCCTACTATAT  88 66
SAHC1340_RS02595 NONE
SAHC1340_RS02590 NONE
SAHC1340_RS02585 NONE
SAHC1340_RS02580  517096 ..  517125 - -12.9   -3.5525   ATAGAGGGGGCTAAA       GGATTGGCGTGGC TAAC GCCACACCAATCA        AAGCAAGTCTGAACC 100 23
SAHC1340_RS02575 NONE
SAHC1340_RS02570 NONE
SAHC1340_RS02565  515259 ..  515270 -  -2.2  -2.72227   AATATCTGTTAAGCA                CCAA TGAT TCGG                 TTAAATAAGTTTAAT  39 7
SAHC1340_RS02560  514411 ..  514434 -  -2.5  -5.65177   ATAGTCATAAAAAAA          GTAGCAATCA GTTAA TGAC-GCTAC          TTATCAAGGTATCCG  74 22
SAHC1340_RS02555  513653 ..  513669 -  -2.9  -3.28261   ATAACTTTAGAGGAA              TTTCAGG TTG CCCGCAA              TGGCTTTTTAATTAG  46 226
SAHC1340_RS02550  512167 ..  512182 -  -4.8  -3.27525   CTCTTCTAAACGGAA              TTGATT CATT AATCAA               CCACCACCTCCTTGG  53 18
SAHC1340_RS02545 NONE
SAHC1340_RS02540  510750 ..  510774 -  -5.1  -5.36364   GTAAAAATAGAAAAA          GAACAATCA AAATAGG TGATTGCTC          TTTCAATGCTTTAAC  77 40
SAHC1340_RS02535 NONE
SAHC1340_RS02530 NONE
SAHC1340_RS02525 NONE
SAHC1340_RS02520 NONE
SAHC1340_RS02515  503852 ..  503887 - -12.2   -4.7254   ATTTTTTATCAAAAA    GAGTACATGATTACAAA GTA TCTGTAATCATGTAC-C    AATATTTGTTATTTT 100 34
SAHC1340_RS15990 NONE
      tet(M)  501577 ..  501594 -  -2.1  -3.14554   TAATAAGAAACCATA             TTTATAT AACA ACATAAA              ACGCACTAAGTTATT  43 31
SAHC1340_RS15985  501282 ..  501323 - -10.3  -5.42975   TCAGATAAACAAAAA GAGCCGATAAGATGAGA GTTTCATT TCTCAAATTATCGGCTC  TGCGTCTTGGCGTCT 100 16
SAHC1340_RS02500 NONE
SAHC1340_RS02495  499667 ..  499683 -  -6.5  -4.46854   TGATGGAATAACAAA              CCTCCCA AAT CGGGAAG              CGTGGATACGATTCG  74 65
SAHC1340_RS02490  498998 ..  499027 -  -4.4  -2.70932   TTGGGTCTTTAACCA       TAGTTTTTACTC CTTACT GTGCAAAAACTA        CTCAGACCTGTTTTC  48 23
SAHC1340_RS02485  497490 ..  497517 -  -6.4  -4.32857   GTCTTGAAAGAGAAA        TTTGGCAATACT TCAC AGTGTTACCAAA         CATTCAATCAGTAGG  74 313
SAHC1340_RS02460  491845 ..  491872 -  -9.3  -5.28826   AAATGGTATAAAAAA        CTGTACTATCT TAAATT AGACAGTACAG         TAATCTCATTTTGAA 100 54
SAHC1340_RS02455 NONE
SAHC1340_RS02450  490002 ..  490013 -    -3  -3.80461   GAATTGAGTATTAAA                TTTG TGTT CAAA                 TCACAAGTTTACAGG  51 34
SAHC1340_RS02440  487593 ..  487640 -   -13  -4.31813   AAGATACCAAAATAA CCCGCCCCCCTCTAGCT-TA AAATGATAAG TATAGCTAGAGGGG-GCGGG TATTTCTTGCAATGA 100 42
        ahpC NONE
        ahpF  484171 ..  484203 -  -6.5  -5.60993   GTCGGGATAAAAAAA      TAACAGCATCTTA ACAAATG TAAGATACTGTCA      GTGAAATGAATGAAA  95 43
SAHC1340_RS02415  483012 ..  483042 - -13.4  -4.90013   TAAGGCAATTAAAAA       GGCATCAAACAGTA ATA TGCTGCTTGATGCC       CAAATGATGACTTTA 100 133
SAHC1340_RS02410  482179 ..  482192 -  -3.9  -3.41222   TGCGAATCCGAAATA               TGAAA AATA TTTCA                ATGATCCAAACTTTA  51 345
SAHC1340_RS02400  481448 ..  481464 -  -6.7  -6.01369   TAAATAATAAAAAAA              TTCAATT GGA AATTGAA              ATAAAGATGGCATTC 100 39
SAHC1340_RS02390  480290 ..  480304 -  -7.2  -3.70469   AATGATAACTTTAAA               TATAGC GAT GCTATA               GATTACAAAAAAGCC  68 346
SAHC1340_RS02360  476403 ..  476434 - -11.8  -5.65177   AGATGCATAAAAAAA      GAACTACGCATTTT AAAT AAAATGCATAGCTC       TTCTTTTTCTTGCAT 100 93
SAHC1340_RS02340  474641 ..  474664 -  -3.8  -3.41393   AGTATATATGTAGAA          GAGGCGGA ATCAATTG TTCGCCTC           TTTTAATTATGCGTA  50 48
SAHC1340_RS02315 NONE
SAHC1340_RS02310 NONE
SAHC1340_RS02305 NONE
        metE NONE
SAHC1340_RS02295  463548 ..  463589 -  -6.8  -5.04082   TAAATAATAAGAAAA CAGGTTATCACAACA-GTA TTAAT TACATGTTGGCATAACCTG TTTTTATTTGTTTAT  84 58
SAHC1340_RS02280  460284 ..  460310 -  -6.8  -2.87211   AGCGTTTCTTATATA         TTGTCTATTAAA ATT TTTAACAAACAA         GAACTATAATTGTCG  61 401
SAHC1340_RS02195  445117 ..  445131 -  -2.9  -3.59087   AATATCATTGCTAAA               TTATG TTCAT CATAA               ATAGCTCTTAATTGC  49 470
SAHC1340_RS02170  442113 ..  442134 -  -4.5   -2.8474   CCTCACTCATAAGTA           GTATATAGT ATTT ACTTTATAC            CGAACGATAATGATT  49 88
SAHC1340_RS02165 NONE
        tatC  441069 ..  441083 -  -7.1  -5.75538   TTTAAAAAATAAAAA               CAGGC CGAGT GCCTG               TTTTTTGTTGCTATA 100 97
SAHC1340_RS02130  434570 ..  434585 -  -6.2  -4.07868   GGAGATGTATATAAA              TTAACG ACGT CGTTAA               TGCAGGCTGATGTGA  67 450
SAHC1340_RS02090 NONE
SAHC1340_RS02085 NONE
SAHC1340_RS02080 NONE
SAHC1340_RS02075  423431 ..  423451 -  -4.1   -4.4767   TCATTTATTAGAAAA            TTTATTGAA TGG TTCAATGAA            ACGTGTACCTCAAAT  67 507
SAHC1340_RS02035  416871 ..  416881 -    -4  -3.55548   TAACATTGTCTTAAA                 TTTC TAT GAAA                 AATTATCTTTTGATG  52 18
SAHC1340_RS02030  415856 ..  415891 - -12.6  -3.30979   TAAAGTGAAATAAAG    CGCCTGTCTCATTAGC GAAA ACTAAAGGGACAGGCG     TATCTGTTTATGAGC 100 123
SAHC1340_RS02015  413856 ..  413890 -  -2.3   -5.5604   TTAAGCAATAAAAAA    TAACCATCGCTAAC TTTGGCTG GTTT-CGATGGTTA     AATGGTTATTAATTT  70 46
SAHC1340_RS01795  384531 ..  384541 -  -5.4    -4.431   CACTTAGCTACAAAA                 CAAG CGA CTTG                 CTGAAACAAGATAAA  69 423
SAHC1340_RS01730  378472 ..  378508 -  -5.3  -5.44638   AGAAGAAAAATAAAA    TTACGGTTTAAGTGT TGACATT ACGTTTAAACCGTAA    TATACTTAAGTCAGT  82 497
SAHC1340_RS01715 NONE
SAHC1340_RS01710  376509 ..  376526 -  -5.5  -3.10715   CTCACCACCATTCAA             CGTCTAC ACTA GTAGGCG              TTTTTTATTTAGTAA  54 323
SAHC1340_RS01700  376122 ..  376137 -  -6.2  -3.87562   AGACAAAAGAGACAA              GTTGTT TAAT AACAAC               GGTAAACCAGTATTT  65 250
SAHC1340_RS01690  374219 ..  374231 -  -3.4  -3.23975   ATGGCGTAAAAATGA                TGGT GTCGT ACCA                GTAATTTCGTCATTA  47 230
SAHC1340_RS01680  370170 ..  370182 -  -4.1  -3.06796   TTGCATTGGATGCAA                CGTTA CAG CAACG                TCCGAAAGAAACGTT  50 521
SAHC1340_RS01670  368874 ..  368924 -  -4.4  -3.81472   TTGAAATTAAAAAAG CACCTAGCAACTCGTTGGGACAATCA CGA TGATTGTCT-A-C-AGTTGC-AGGTG GATTTGAATATACTA  57 45
SAHC1340_RS01660 NONE
SAHC1340_RS01655  364804 ..  364814 -  -6.8  -3.07935   ATTCCATGGAGCGAA                 GCTG TTC CAGC                 TGGCTCTTTAATGGC  59 407
        brnQ  355449 ..  355480 - -12.5  -5.37043   ATTTCATATAAAAAA      GCCTAGTAACGAT GGGTCA ATCATTACTAGGC       AGTGAGCATTTATTA 100 38
SAHC1340_RS01605  354371 ..  354417 -  -6.9  -5.47399   CGAACTTTAAAAAAA TACGTTAGACAATGCACTTCTAA ATA TTA-AAG-GCATCGACTAACGCA TTGTTCAAATAGAGT  91 40
SAHC1340_RS01470  330966 ..  331012 -    -9  -4.87008   AACATACAAAATAAA GCGACCAATTTTGCAGTGTTAC GAATT GTAA-ACTGCGAA-CTGGTCGC TTTTTATTGATGTCA  95 49
SAHC1340_RS01465  329135 ..  329168 - -11.3  -2.71364   CCACTCCTCCAATGA     TAAGATTGAAAGG-CA AGA TGACCTTCCAATCTTA     TTTTTATATTTTAGT  87 40
SAHC1340_RS01460 NONE
SAHC1340_RS01455 NONE
SAHC1340_RS01450  326317 ..  326348 - -11.8  -3.96051   AGATAATACAGTAAA      TCCCAAGTTACG-AT ATC ATACGCAACTTGGGA      TTTTTTCGTTTTAAT 100 36
SAHC1340_RS01435  322324 ..  322357 - -14.1  -3.64882   GAATAATAATTAGAA     TAAGCGAAGAACAAT GAAA AATGTTCTTCGCTTA      TTTTTATAGAATTTG 100 97
SAHC1340_RS01420  320468 ..  320494 - -10.2   -4.7871   AATTATGATTAAAAA         CCCTCAGCATTA AAG CAACGCTAAGGG         CCTAACAATGATGAG 100 62
        rbsU NONE
        rbsD  319010 ..  319024 -  -2.8  -3.81256   ATTTTTAAAAAGTAA               CATTCG ATT CTAATG               CAATATTAGAGTAGG  49 0
        rbsK  317988 ..  318046 -  -4.7  -3.93487   ATAAAGATAAAAAAG CACAGCCATGATATACGAATGTTGCAT GTTAT ATGCTAAACCTTCATATCATAGCTGTG TTTGATTCATTTAAA  61 36
SAHC1340_RS01395  316699 ..  316718 -  -9.4  -3.09273   GGCCCCCAACACAGA            GAAATTGG AACA CCAATTTC             AACAGGCAATGCAAG  78 352
SAHC1340_RS01375  313407 ..  313441 - -15.2  -4.37886   TTATGTCCTATAAAA     CGTCTATACTCCGGTT TAT AACTGGAATATAGACG     TTTTGATGTTTGTAT 100 40
SAHC1340_RS01250  284307 ..  284330 -  -5.4  -2.52834   CAGTGCATGATGAAC          TTAATGTTTC AAAT GCAACATTAA           AAATAAAAGCAGCGA  52 98
SAHC1340_RS01230 NONE
SAHC1340_RS01225  281171 ..  281198 -  -4.2  -5.26875   CTCCCAATTAAAAAA        CAACCATGAC AAAGTAAA GTCATAGCTG         TTTTTGTATAGATGT  74 40
SAHC1340_RS01220 NONE
SAHC1340_RS01215  278945 ..  278979 -  -7.8  -4.16205   TATAAGCAAATTAAA     CCACGCCATCATCATC TAG AATGACTTCGGCGTGG     TTTTTATTGAAGCGG  77 73
SAHC1340_RS01200  274551 ..  274608 -  -3.8  -3.90048   TTTGGCGCAAAAATA CCGATAACATCGC-C-TTTTTTAACACC TTGA GATGTTAAATAATGTGCCATATTATCAG CGCGTGCATTGAGTT  56 160
SAHC1340_RS01190  271943 ..  271971 -    -6  -5.26875   TTTTGAACCAAAAAA        TCGAAGGCACCC GTGAA AGATGTCTTCGA        TTTTTGTTTTTTTTG  84 65
SAHC1340_RS01180 NONE
SAHC1340_RS01170  266224 ..  266235 -  -3.6  -4.24002   TGTTAAATTCTAAAA                CGGA AATA CCCG                 CTATCCTATTAAACC  57 168
SAHC1340_RS01160  265728 ..  265752 -  -2.1  -4.78077   GCCAAGTAAAACAAA          TGCATACAATG TAA CAACACATGCA          GATGGTACTGCGACA  62 246
SAHC1340_RS01150  263194 ..  263230 - -16.1  -4.69415   AGTAATATAAACAAA    GACCTCTAAAGTTATCA AGA TGATATCTTCAGAGGTC    TTTTTAACGTTGCCA 100 142
SAHC1340_RS01125 NONE
SAHC1340_RS01120 NONE
SAHC1340_RS01115  254121 ..  254160 -   -13  -4.59109   TAGACTCTCTAAAAA  GCGGATTGAAAGAAAAGT GAAA ACTTCTCTATCAGTCCGC   TTTTTCATAGAACAA 100 76
SAHC1340_RS01105  251581 ..  251622 - -14.8   -3.0161   ATTCACAATAACAAT CCTCACTATTGAAAAG AGTAAATAAG CTTTTCAATAGTGAGG  TATATGATAATAAAA 100 162
SAHC1340_RS01060  241729 ..  241759 -  -7.7  -6.07969   GAAAATCAAAAAAAA       CACTGTATGAC GTTTGATTA GTCACACAGTG       TAGATAACAATTAAA 100 36
SAHC1340_RS01055  239958 ..  239969 -  -4.4  -3.18452   TGTTGAAAGAAAGGA                TTCG ATTT CGAA                 CTTTAGCGTGACGCT  52 326
SAHC1340_RS01030  231646 ..  231674 - -11.1  -4.18421   TAAGGATACAAATAA       TCCCCCG-CACT TCACAT AGTGGCGGGGGA        TTTATCATGCGTTAA  95 220
SAHC1340_RS01015  227275 ..  227298 -  -8.2  -4.13995   GTGTGACAAATTAAA          GCAAAGTTCA GGTT TGAGCTTTGC           TTTTTTCATAGTATA  80 45
SAHC1340_RS00990  220151 ..  220184 - -13.3  -5.27477   ATTGCAATGAAAAAA     CAGGCGCGT-CACCTT ATG AAGGTATACGCACCTG     TTTATAGTAAGCATT 100 39
SAHC1340_RS00980 NONE
SAHC1340_RS00975  217627 ..  217651 - -15.1  -3.48884   TGTGAAATAAAGATA          CCCCCTTCAAT ATA ATCGAAGGGGG          AAGTGAATGTTTAGT 100 36
        brnQ  215989 ..  216023 - -15.2  -5.52023   AGTATGAATAAAAAA     TGCCACAAGCATATGT TTA ACATATGACTGTGGCA     TAGTATTATGCTTGT 100 31
        rocD  214585 ..  214595 -  -2.6  -3.09517   ATCATATATAAATGA                 TTAA TTG TTAA                 TTTTTAAAAACGTCT  42 22
SAHC1340_RS00960 NONE
        argJ NONE
        argB  211321 ..  211331 -  -5.4  -3.14991   TACAAATTTGAAAAT                 CACT TAT AGTG                 TTTTTCATCTCATAT  56 177
SAHC1340_RS00945  210653 ..  210703 -  -7.2  -4.67982   TGTCAGTTAATAAAA TAACGTGAGCATCA-ATCATCAT ACTCAA ACGATGATTTAAAACTCACGTTA ATGTTAGTCAGTGTA  81 41
SAHC1340_RS00890  193898 ..  193909 -    -3  -4.09685   TTGTAGCGCCTAAAA                CATT AATC AATG                 TCATAGGCGCATGTT  55 52
SAHC1340_RS00875 NONE
        isdI  189465 ..  189480 -  -3.3  -3.73783   GAGTCAAGCGAATAA              TCCAT ATGGTG ATGGA               CAAGCATCACGACGT  52 183
SAHC1340_RS00760 NONE
        phnC NONE
        phnE NONE
        phnE  160359 ..  160400 - -16.1  -5.27206   TAGATATAATAAAAA CAGCAGTGAAGTTAACTAT AATA ATAGTTTTCTTCACTGCTG  TTTTTATTATAATAG 100 91
SAHC1340_RS00715  155111 ..  155133 -  -3.4  -5.59655   CAAAGTAACAAAAAA           GTTTTACCAG CTG CTGGTGAAAG           TATGACATCAAGTAT  82 221
        sirA NONE
        sirB NONE
        sirC  130786 ..  130798 -  -3.5  -2.82422   AAGAAAAATAATCCA                TAATT TAC AATTA                AAAATAATATGATAT  45 316
        sarS  129924 ..  129956 -  -8.5  -5.06052   TTAAAAAATAGAAAA      CACAAGTGCACTTTA GAA TACAGCACACTTGCG      TAATAGAGATATTAT  95 37
         spa  128132 ..  128163 - -12.5  -5.85244   AAGTAAAATAAAAAA      TGCACTGAGCAACA AAAGA TGTTGCTC-GTGCA      TTTAGATGATTCTTA 100 129
SAHC1340_RS00575  123347 ..  123357 -    -4  -4.63486   ACTTGTTTAACAAAA                 TGAT GCA ATCA                 ATCATGCAATTATGT  66 153
SAHC1340_RS00570  121413 ..  121437 -  -7.9  -5.63517   TTGCTAAACAAAAAA          GCCAACCCA TGAATGT TGGATTGGC          TTTTTACATGCATCT 100 87
SAHC1340_RS00515  107098 ..  107118 -  -6.9   -5.4659   TAACACAAACAAAAA            GGAGGAA ACTTAAA TTCCTCC            TCAACCTTTATTACT  91 45
SAHC1340_RS00490 NONE
SAHC1340_RS00485 NONE
SAHC1340_RS00480  101642 ..  101686 -  -7.6   -4.1851   TTAAAGCATAAAGAA CGCTACTTCA-TTTCCAT-TAA TAT TTATATAGAAAGTAAAGTAGCG TTATTCTAACTTATT  77 79
SAHC1340_RS00470   99532 ..   99553 -  -2.4  -4.63526   ATAATGAGAAAGAAA           TTACAAAT GAACTT ATTCGTAA            AATCGCTTTTAAATA  60 138
SAHC1340_RS00445 NONE
SAHC1340_RS00440   91947 ..   91985 -  -8.4  -3.09878   TCCATTGATTTAATA  TTTGTGCTACAACACCT TTAAAT AGGTGTTGTAGCA-AAT   TTATTTAATAACATA  73 50
SAHC1340_RS00435   91508 ..   91532 - -15.8  -3.66787   CGAAATTATAGATAA          GCCCAACACC AGTCG GGTGTTGGGC          GGTATTATTAGTCAT 100 138
SAHC1340_RS00430   90110 ..   90124 -  -8.6  -3.14211   ATCCTTTCTGATTAA               GCAATC GAT GATTGC               GAGGTTTGGTTCACA  73 7
SAHC1340_RS00425   88176 ..   88193 -  -3.5  -2.57501   TCTCAGGAAATATAG             CGATATA TTTA TATATCA              TTTGGATTTGGTGGT  43 289
SAHC1340_RS00420 NONE
SAHC1340_RS00415 NONE
SAHC1340_RS00410 NONE
SAHC1340_RS00405 NONE
SAHC1340_RS00400 NONE
SAHC1340_RS00395 NONE
SAHC1340_RS00390   83575 ..   83604 - -16.7  -4.90136   AATTAATATTAAAAA       GGATTGGTTTCTA ATGT TAGAAACCAATCC        TTTCGGAGATTTTAA 100 126
SAHC1340_RS00385 NONE
        cadA   80633 ..   80677 -  -9.6  -2.61873   ATCATCTCCAAATAT TTTAGGGATAGGACTTTTCTT CAAA ATGAAAAGTCCT-TCCGTAAA TTGCACACATATAGT  75 43
SAHC1340_RS00375   79922 ..   79974 - -14.6  -2.92144   CGTAAATGATAATTA GTTAAATATAAAAAGGTTATCCCA ATCAA TAGGATAACCTCTTTATACTTTAC TTTATGGTTTGGATT 100 48
SAHC1340_RS00360   77579 ..   77593 -  -5.8  -4.37092   ATTGTCTTCATAAAA               TTGTTT GAA AAACAA               AAAAACTCCTTTTTA  70 57
     psm-mec   74549 ..   74598 - -14.7  -3.31208   GTTTACAACAATACA TAGAAAACAGAGGAAACAATCAA GTCG TTGAATATTTCCTCTGTTTTTTA GTTGAAAAAATTAAC 100 30
        mecA   70242 ..   70292 - -15.9  -2.67428   CTTATTAATAATTCA TAATAAAACAGTGAAGCAA-CCAT CGTT ACGGATTGCTTCACTGTTTTGTTA TTCATCTATATCGTA 100 23
SAHC1340_RS00310 NONE
SAHC1340_RS00305   66369 ..   66401 - -15.1   -2.7535   TTCTTGAATATAGGA      GTAAATAAGGTGCCA AAA TGGCACCTTATTTAA      AATATGTAACGCCAA 100 18
SAHC1340_RS00265 NONE
SAHC1340_RS00260   56913 ..   56944 - -18.2  -3.66784   TCATCTTTAATATAA      GAGCATCCCTCACT GCAA AGTGAAGGATGCTC       TTTTAGTTTATTTTT 100 41
SAHC1340_RS00235   52733 ..   52746 -  -2.5  -3.27639   TAAGAGTCATAAAAG               TAATT ATTT AATTA                TTATGGGAGAAACAA  45 418
SAHC1340_RS16610 NONE
      erm(A)   48763 ..   48797 -  -9.5  -3.61894   AATTTTTGGGAAGAA     TAAAGCGTCCTCT TGTGAAATT AGAGAACGCTTTA     TTACTTTAATTTAGT  84 36
SAHC1340_RS00035    9674 ..    9703 -  -7.9  -5.97979   AGAATAATAAAAAAA       TAAGACTTCCCTA TATG TAGGGGGGTCTTA        TTTTTATGCTAGAAA 100 75
