X998_RS00005 SM00382 ATPases associated with a variety of cellular activities X998_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain X998_RS00010 SM00480 DNA polymerase III beta subunit X998_RS00025 SM00387 Histidine kinase-like ATPases X998_RS00025 SM00433 TopoisomeraseII X998_RS00030 SM00434 DNA Topoisomerase IV X998_RS00070 SM00267 diguanylate cyclase X998_RS00085 SM00788 Adenylosuccinate synthetase X998_RS00100 SM00448 cheY-homologous receiver domain X998_RS00100 SM00862 Transcriptional regulatory protein, C terminal X998_RS00105 SM00091 PAS domain X998_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain X998_RS00105 SM00387 Histidine kinase-like ATPases X998_RS00105 SM00388 His Kinase A (phosphoacceptor) domain X998_RS00120 SM00849 Metallo-beta-lactamase superfamily X998_RS00210 SM00857 Resolvase, N terminal domain X998_RS00230 SM00450 Rhodanese Homology Domain X998_RS00230 SM00849 Metallo-beta-lactamase superfamily X998_RS00235 SM00450 Rhodanese Homology Domain X998_RS00305 SM00450 Rhodanese Homology Domain X998_RS00310 SM00450 Rhodanese Homology Domain X998_RS00310 SM00849 Metallo-beta-lactamase superfamily X998_RS00380 SM00148 Phospholipase C, catalytic domain (part); domain X X998_RS00405 SM00342 helix_turn_helix, arabinose operon control protein X998_RS00435 SM00345 helix_turn_helix gluconate operon transcriptional repressor X998_RS00450 SM00257 Lysin motif X998_RS00455 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS00515 SM00470 ParB-like nuclease domain X998_RS00535 SM00822 X998_RS00535 X998_RS00580 SM00345 helix_turn_helix gluconate operon transcriptional repressor X998_RS00600 SM01133 X998_RS00600 X998_RS00620 SM00382 ATPases associated with a variety of cellular activities X998_RS00625 SM00062 Bacterial periplasmic substrate-binding proteins X998_RS00740 SM00984 UDP binding domain X998_RS00780 SM00382 ATPases associated with a variety of cellular activities X998_RS00840 SM00859 Semialdehyde dehydrogenase, NAD binding domain X998_RS00895 SM00487 DEAD-like helicases superfamily X998_RS00915 SM00382 ATPases associated with a variety of cellular activities X998_RS00955 SM00382 ATPases associated with a variety of cellular activities X998_RS01000 SM00342 helix_turn_helix, arabinose operon control protein X998_RS01000 SM00448 cheY-homologous receiver domain X998_RS01075 SM00882 Coenzyme A transferase X998_RS01155 SM00829 Enoylreductase X998_RS01165 SM00829 Enoylreductase X998_RS01215 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. X998_RS01215 SM00387 Histidine kinase-like ATPases X998_RS01220 SM00448 cheY-homologous receiver domain X998_RS01220 SM00850 LytTr DNA-binding domain X998_RS01235 SM00345 helix_turn_helix gluconate operon transcriptional repressor X998_RS01235 SM00866 X998_RS01235 X998_RS01280 SM00354 helix_turn _helix lactose operon repressor X998_RS01315 SM00382 ATPases associated with a variety of cellular activities X998_RS01520 SM00382 ATPases associated with a variety of cellular activities X998_RS01550 SM01130 X998_RS01550 X998_RS01595 SM00530 Helix-turn-helix XRE-family like proteins X998_RS01600 SM00530 Helix-turn-helix XRE-family like proteins X998_RS01610 SM01040 BRO family, N-terminal domain X998_RS01730 SM00530 Helix-turn-helix XRE-family like proteins X998_RS01810 SM00507 HNH nucleases X998_RS01865 SM00635 Bacterial Ig-like domain 2 X998_RS01930 SM00287 Bacterial SH3 domain homologues X998_RS01930 SM00646 X998_RS01930 X998_RS01970 SM00506 Appr-1"-p processing enzyme X998_RS02010 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS02090 SM00530 Helix-turn-helix XRE-family like proteins X998_RS02100 SM00382 ATPases associated with a variety of cellular activities X998_RS02150 SM00470 ParB-like nuclease domain X998_RS02230 SM00855 Phosphoglycerate mutase family X998_RS02300 SM00116 Domain in cystathionine beta-synthase and other proteins. X998_RS02300 SM01240 X998_RS02300 X998_RS02455 SM00833 Cobalamin synthesis protein cobW C-terminal domain X998_RS02485 SM00014 Acid phosphatase homologues X998_RS02515 SM00382 ATPases associated with a variety of cellular activities X998_RS02515 SM00930 X998_RS02515 X998_RS02530 SM00257 Lysin motif X998_RS02585 SM00642 Alpha-amylase domain X998_RS02590 SM00345 helix_turn_helix gluconate operon transcriptional repressor X998_RS02590 SM00866 X998_RS02590 X998_RS02605 SM00382 ATPases associated with a variety of cellular activities X998_RS02615 SM00278 Helix-hairpin-helix DNA-binding motif class 1 X998_RS02615 SM00493 X998_RS02615 X998_RS02680 SM00465 GIY-YIG type nucleases (URI domain) X998_RS02705 SM00493 X998_RS02705 X998_RS02710 SM00650 Ribosomal RNA adenine dimethylases X998_RS02750 SM01400 X998_RS02750 X998_RS02770 SM00487 DEAD-like helicases superfamily X998_RS02770 SM00490 helicase superfamily c-terminal domain X998_RS02770 SM00982 X998_RS02770 X998_RS02770 SM01058 CarD-like/TRCF domain X998_RS02785 SM00363 S4 RNA-binding domain X998_RS02795 SM00316 Ribosomal protein S1-like RNA-binding domain X998_RS02800 SM00977 TilS substrate C-terminal domain X998_RS02810 SM00382 ATPases associated with a variety of cellular activities X998_RS02830 SM00905 Dihydroneopterin aldolase X998_RS02895 SM00345 helix_turn_helix gluconate operon transcriptional repressor X998_RS02930 SM00382 ATPases associated with a variety of cellular activities X998_RS02930 SM01086 C-terminal, D2-small domain, of ClpB protein X998_RS02940 SM00382 ATPases associated with a variety of cellular activities X998_RS02945 SM00670 Large family of predicted nucleotide-binding domains X998_RS02960 SM00840 X998_RS02960 X998_RS02970 SM00967 RNA 2'-O ribose methyltransferase substrate binding X998_RS02990 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. X998_RS02990 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. X998_RS02995 SM00649 Ribosomal protein L11/L12 X998_RS03025 SM00663 RNA polymerase I subunit A N-terminus X998_RS03045 SM00838 Elongation factor G C-terminus X998_RS03045 SM00889 Elongation factor G, domain IV X998_RS03160 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family X998_RS03210 SM00986 Uracil DNA glycosylase superfamily X998_RS03210 SM00987 UreE urease accessory protein, C-terminal domain X998_RS03375 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. X998_RS03385 SM00829 Enoylreductase X998_RS03400 SM00836 DALR anticodon binding domain X998_RS03400 SM01016 Arginyl tRNA synthetase N terminal dom X998_RS03405 SM00478 endonuclease III X998_RS03520 SM00382 ATPases associated with a variety of cellular activities X998_RS03525 SM00529 Helix-turn-helix diphteria tox regulatory element X998_RS03525 SM00899 X998_RS03525 X998_RS03540 SM00382 ATPases associated with a variety of cellular activities X998_RS03570 SM00382 ATPases associated with a variety of cellular activities X998_RS03590 SM00382 ATPases associated with a variety of cellular activities X998_RS03610 SM01120 X998_RS03610 X998_RS03655 SM00448 cheY-homologous receiver domain X998_RS03655 SM00862 Transcriptional regulatory protein, C terminal X998_RS03660 SM00387 Histidine kinase-like ATPases X998_RS03665 SM00382 ATPases associated with a variety of cellular activities X998_RS03685 SM00257 Lysin motif X998_RS03695 SM00342 helix_turn_helix, arabinose operon control protein X998_RS03790 SM00382 ATPases associated with a variety of cellular activities X998_RS03795 SM00382 ATPases associated with a variety of cellular activities X998_RS03800 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS03805 SM00833 Cobalamin synthesis protein cobW C-terminal domain X998_RS03860 SM00420 helix_turn_helix, Deoxyribose operon repressor X998_RS03860 SM01134 X998_RS03860 X998_RS03885 SM01091 Transporter associated domain X998_RS03900 SM00387 Histidine kinase-like ATPases X998_RS03900 SM00388 His Kinase A (phosphoacceptor) domain X998_RS03905 SM00448 cheY-homologous receiver domain X998_RS03905 SM00862 Transcriptional regulatory protein, C terminal X998_RS03960 SM00796 Allophanate hydrolase subunit 1 X998_RS03965 SM00797 Allophanate hydrolase subunit 2 X998_RS03980 SM00382 ATPases associated with a variety of cellular activities X998_RS03985 SM00341 Helicase and RNase D C-terminal X998_RS03985 SM00487 DEAD-like helicases superfamily X998_RS03985 SM00490 helicase superfamily c-terminal domain X998_RS03985 SM00956 X998_RS03985 X998_RS03990 SM00382 ATPases associated with a variety of cellular activities X998_RS04015 SM00046 Diacylglycerol kinase catalytic domain (presumed) X998_RS04075 SM00382 ATPases associated with a variety of cellular activities X998_RS04130 SM00267 diguanylate cyclase X998_RS04150 SM00487 DEAD-like helicases superfamily X998_RS04150 SM00490 helicase superfamily c-terminal domain X998_RS04165 SM00957 SecA DEAD-like domain X998_RS04165 SM00958 SecA preprotein cross-linking domain X998_RS04175 SM00937 X998_RS04175 X998_RS04185 SM00257 Lysin motif X998_RS04200 SM00487 DEAD-like helicases superfamily X998_RS04200 SM00490 helicase superfamily c-terminal domain X998_RS04225 SM00028 Tetratricopeptide repeats X998_RS04280 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain X998_RS04300 SM01192 X998_RS04300 X998_RS04300 SM01193 X998_RS04300 X998_RS04320 SM00316 Ribosomal protein S1-like RNA-binding domain X998_RS04320 SM00357 Cold shock protein domain X998_RS04320 SM00955 X998_RS04320 X998_RS04385 SM00318 Staphylococcal nuclease homologues X998_RS04390 SM00357 Cold shock protein domain X998_RS04430 SM00855 Phosphoglycerate mutase family X998_RS04490 SM00493 X998_RS04490 X998_RS04500 SM00382 ATPases associated with a variety of cellular activities X998_RS04500 SM00930 X998_RS04500 X998_RS04540 SM00530 Helix-turn-helix XRE-family like proteins X998_RS04545 SM00530 Helix-turn-helix XRE-family like proteins X998_RS04570 SM00942 Primase C terminal 1 (PriCT-1) X998_RS04660 SM00382 ATPases associated with a variety of cellular activities X998_RS04725 SM00729 Elongator protein 3, MiaB family, Radical SAM X998_RS04870 SM01298 X998_RS04870 X998_RS04880 SM00316 Ribosomal protein S1-like RNA-binding domain X998_RS04895 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase X998_RS05020 SM00382 ATPases associated with a variety of cellular activities X998_RS05020 SM01086 C-terminal, D2-small domain, of ClpB protein X998_RS05065 SM00825 Beta-ketoacyl synthase X998_RS05085 SM00382 ATPases associated with a variety of cellular activities X998_RS05090 SM00382 ATPases associated with a variety of cellular activities X998_RS05105 SM00382 ATPases associated with a variety of cellular activities X998_RS05110 SM00382 ATPases associated with a variety of cellular activities X998_RS05160 SM01118 X998_RS05160 X998_RS05170 SM00954 Region found in RelA / SpoT proteins X998_RS05185 SM00116 Domain in cystathionine beta-synthase and other proteins. X998_RS05185 SM00924 MgtE intracellular N domain X998_RS05250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. X998_RS05280 SM00914 X998_RS05280 X998_RS05320 SM00382 ATPases associated with a variety of cellular activities X998_RS05415 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS05425 SM00047 Lysozyme subfamily 2 X998_RS05425 SM00644 X998_RS05425 X998_RS05485 SM01001 AIR carboxylase X998_RS05505 SM01211 X998_RS05505 X998_RS05530 SM00798 AICARFT/IMPCHase bienzyme X998_RS05530 SM00851 MGS-like domain X998_RS05535 SM01209 X998_RS05535 X998_RS05535 SM01210 X998_RS05535 X998_RS05545 SM00382 ATPases associated with a variety of cellular activities X998_RS05615 SM00849 Metallo-beta-lactamase superfamily X998_RS05645 SM00861 Transketolase, pyrimidine binding domain X998_RS05665 SM00530 Helix-turn-helix XRE-family like proteins X998_RS05670 SM00382 ATPases associated with a variety of cellular activities X998_RS05720 SM00838 Elongation factor G C-terminus X998_RS05745 SM00878 Biotin carboxylase C-terminal domain X998_RS05825 SM00725 NEAr Transporter domain X998_RS05830 SM00725 NEAr Transporter domain X998_RS05835 SM00725 NEAr Transporter domain X998_RS05870 SM00967 RNA 2'-O ribose methyltransferase substrate binding X998_RS05880 SM00873 B3/4 domain X998_RS05880 SM00874 tRNA synthetase B5 domain X998_RS05880 SM00896 Ferredoxin-fold anticodon binding domain X998_RS05900 SM00278 Helix-hairpin-helix DNA-binding motif class 1 X998_RS05900 SM00481 DNA polymerase alpha chain like domain X998_RS05900 SM00483 DNA polymerase X family X998_RS05905 SM00463 Small MutS-related domain X998_RS05905 SM00533 DNA-binding domain of DNA mismatch repair MUTS family X998_RS05905 SM00534 ATPase domain of DNA mismatch repair MUTS family X998_RS05920 SM00465 GIY-YIG type nucleases (URI domain) X998_RS06130 SM00740 X998_RS06130 X998_RS06150 SM00842 Cell division protein FtsA X998_RS06155 SM00864 Tubulin/FtsZ family, GTPase domain X998_RS06155 SM00865 Tubulin/FtsZ family, C-terminal domain X998_RS06180 SM00363 S4 RNA-binding domain X998_RS06210 SM00363 S4 RNA-binding domain X998_RS06235 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain X998_RS06240 SM00851 MGS-like domain X998_RS06240 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain X998_RS06240 SM01209 X998_RS06240 X998_RS06245 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family X998_RS06270 SM00072 Guanylate kinase homologues. X998_RS06275 SM01409 X998_RS06275 X998_RS06285 SM00487 DEAD-like helicases superfamily X998_RS06285 SM00490 helicase superfamily c-terminal domain X998_RS06320 SM00331 Sigma factor PP2C-like phosphatases X998_RS06320 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain X998_RS06340 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain X998_RS06355 SM01120 X998_RS06355 X998_RS06355 SM01121 X998_RS06355 X998_RS06360 SM00487 DEAD-like helicases superfamily X998_RS06360 SM00490 helicase superfamily c-terminal domain X998_RS06375 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. X998_RS06380 SM00822 X998_RS06380 X998_RS06395 SM00358 Double-stranded RNA binding motif X998_RS06395 SM00535 Ribonuclease III family X998_RS06400 SM00968 SMC proteins Flexible Hinge Domain X998_RS06405 SM00382 ATPases associated with a variety of cellular activities X998_RS06405 SM00962 SRP54-type protein, GTPase domain X998_RS06405 SM00963 SRP54-type protein, helical bundle domain X998_RS06415 SM00382 ATPases associated with a variety of cellular activities X998_RS06415 SM00962 SRP54-type protein, GTPase domain X998_RS06415 SM00963 SRP54-type protein, helical bundle domain X998_RS06465 SM00881 CoA binding domain X998_RS06470 SM00257 Lysin motif X998_RS06485 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain X998_RS06485 SM00437 Bacterial DNA topoisomerase I DNA-binding domain X998_RS06485 SM00493 X998_RS06485 X998_RS06505 SM00382 ATPases associated with a variety of cellular activities X998_RS06505 SM01086 C-terminal, D2-small domain, of ClpB protein X998_RS06565 SM00479 X998_RS06565 X998_RS06565 SM00481 DNA polymerase alpha chain like domain X998_RS06575 SM00316 Ribosomal protein S1-like RNA-binding domain X998_RS06575 SM00322 K homology RNA-binding domain X998_RS06605 SM00904 Riboflavin kinase X998_RS06610 SM01387 X998_RS06610 X998_RS06615 SM00316 Ribosomal protein S1-like RNA-binding domain X998_RS06615 SM00322 K homology RNA-binding domain X998_RS06620 SM00849 Metallo-beta-lactamase superfamily X998_RS06625 SM00382 ATPases associated with a variety of cellular activities X998_RS06625 SM00843 X998_RS06625 X998_RS06630 SM00345 helix_turn_helix gluconate operon transcriptional repressor X998_RS06630 SM00866 X998_RS06630 X998_RS06655 SM00530 Helix-turn-helix XRE-family like proteins X998_RS06665 SM00852 Probable molybdopterin binding domain X998_RS06670 SM00382 ATPases associated with a variety of cellular activities X998_RS06675 SM00322 K homology RNA-binding domain X998_RS06675 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. X998_RS06705 SM00729 Elongator protein 3, MiaB family, Radical SAM X998_RS06720 SM00533 DNA-binding domain of DNA mismatch repair MUTS family X998_RS06720 SM00534 ATPase domain of DNA mismatch repair MUTS family X998_RS06725 SM00853 MutL C terminal dimerisation domain X998_RS06725 SM01340 X998_RS06725 X998_RS06780 SM00422 helix_turn_helix, mercury resistance X998_RS06785 SM01230 X998_RS06785 X998_RS06895 SM00155 Phospholipase D. Active site motifs. X998_RS06900 SM00382 ATPases associated with a variety of cellular activities X998_RS06915 SM00421 helix_turn_helix, Lux Regulon X998_RS06915 SM00448 cheY-homologous receiver domain X998_RS06925 SM00318 Staphylococcal nuclease homologues X998_RS06980 SM01060 X998_RS06980 X998_RS06995 SM01240 X998_RS06995 X998_RS07025 SM00861 Transketolase, pyrimidine binding domain X998_RS07080 SM01207 X998_RS07080 X998_RS07085 SM00387 Histidine kinase-like ATPases X998_RS07085 SM00433 TopoisomeraseII X998_RS07090 SM00434 DNA Topoisomerase IV X998_RS07105 SM01061 CAT RNA binding domain X998_RS07210 SM00382 ATPases associated with a variety of cellular activities X998_RS07215 SM00382 ATPases associated with a variety of cellular activities X998_RS07250 SM00382 ATPases associated with a variety of cellular activities X998_RS07285 SM00382 ATPases associated with a variety of cellular activities X998_RS07295 SM00859 Semialdehyde dehydrogenase, NAD binding domain X998_RS07300 SM01130 X998_RS07300 X998_RS07320 SM01005 Alanine racemase, C-terminal domain X998_RS07335 SM00357 Cold shock protein domain X998_RS07380 SM00327 von Willebrand factor (vWF) type A domain X998_RS07405 SM00861 Transketolase, pyrimidine binding domain X998_RS07415 SM00448 cheY-homologous receiver domain X998_RS07415 SM00862 Transcriptional regulatory protein, C terminal X998_RS07425 SM00014 Acid phosphatase homologues X998_RS07440 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. X998_RS07440 SM00245 tail specific protease X998_RS07490 SM00567 E-Z type HEAT repeats X998_RS07490 SM00932 Scaffold protein Nfu/NifU N terminal X998_RS07495 SM00932 Scaffold protein Nfu/NifU N terminal X998_RS07525 SM00844 GA module X998_RS07545 SM01002 Alanine dehydrogenase/PNT, C-terminal domain X998_RS07545 SM01003 Alanine dehydrogenase/PNT, N-terminal domain X998_RS07550 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs X998_RS07550 SM00475 5'-3' exonuclease X998_RS07575 SM00981 X998_RS07575 X998_RS07615 SM00478 endonuclease III X998_RS07615 SM00525 X998_RS07615 X998_RS07630 SM00479 X998_RS07630 X998_RS07630 SM00491 X998_RS07630 X998_RS07665 SM00914 X998_RS07665 X998_RS07670 SM00028 Tetratricopeptide repeats X998_RS07695 SM00562 X998_RS07695 X998_RS07720 SM00411 bacterial (prokaryotic) histone like domain X998_RS07735 SM00316 Ribosomal protein S1-like RNA-binding domain X998_RS07760 SM00870 X998_RS07760 X998_RS07775 SM00257 Lysin motif X998_RS07780 SM00487 DEAD-like helicases superfamily X998_RS07780 SM00490 helicase superfamily c-terminal domain X998_RS07835 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain X998_RS07835 SM00387 Histidine kinase-like ATPases X998_RS07835 SM00388 His Kinase A (phosphoacceptor) domain X998_RS07840 SM00448 cheY-homologous receiver domain X998_RS07840 SM00862 Transcriptional regulatory protein, C terminal X998_RS07845 SM00363 S4 RNA-binding domain X998_RS07910 SM00342 helix_turn_helix, arabinose operon control protein X998_RS07910 SM00871 Bacterial transcription activator, effector binding domain X998_RS07915 SM00642 Alpha-amylase domain X998_RS07920 SM00354 helix_turn _helix lactose operon repressor X998_RS07935 SM01350 X998_RS07935 X998_RS07965 SM00861 Transketolase, pyrimidine binding domain X998_RS08015 SM00878 Biotin carboxylase C-terminal domain X998_RS08100 SM00841 Elongation factor P, C-terminal X998_RS08100 SM01185 X998_RS08100 X998_RS08125 SM00450 Rhodanese Homology Domain X998_RS08185 SM00849 Metallo-beta-lactamase superfamily X998_RS08240 SM00382 ATPases associated with a variety of cellular activities X998_RS08245 SM00518 AP endonuclease family 2 X998_RS08250 SM00487 DEAD-like helicases superfamily X998_RS08250 SM00490 helicase superfamily c-terminal domain X998_RS08270 SM00400 zinc finger X998_RS08270 SM00493 X998_RS08270 X998_RS08280 SM00116 Domain in cystathionine beta-synthase and other proteins. X998_RS08340 SM00729 Elongator protein 3, MiaB family, Radical SAM X998_RS08355 SM00271 DnaJ molecular chaperone homology domain X998_RS08375 SM00729 Elongator protein 3, MiaB family, Radical SAM X998_RS08385 SM00838 Elongation factor G C-terminus X998_RS08400 SM00849 Metallo-beta-lactamase superfamily X998_RS08410 SM00278 Helix-hairpin-helix DNA-binding motif class 1 X998_RS08425 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. X998_RS08435 SM01103 X998_RS08435 X998_RS08490 SM00878 Biotin carboxylase C-terminal domain X998_RS08500 SM00797 Allophanate hydrolase subunit 2 X998_RS08505 SM00796 Allophanate hydrolase subunit 1 X998_RS08540 SM00732 Likely ribonuclease with RNase H fold. X998_RS08550 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain X998_RS08555 SM00382 ATPases associated with a variety of cellular activities X998_RS08560 SM00028 Tetratricopeptide repeats X998_RS08595 SM00382 ATPases associated with a variety of cellular activities X998_RS08620 SM00287 Bacterial SH3 domain homologues X998_RS08620 SM00646 X998_RS08620 X998_RS08630 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. X998_RS08630 SM00954 Region found in RelA / SpoT proteins X998_RS08650 SM01323 X998_RS08650 X998_RS08665 SM00382 ATPases associated with a variety of cellular activities X998_RS08670 SM00278 Helix-hairpin-helix DNA-binding motif class 1 X998_RS08770 SM01004 Delta-aminolevulinic acid dehydratase X998_RS08800 SM00382 ATPases associated with a variety of cellular activities X998_RS08800 SM00994 ClpX C4-type zinc finger X998_RS08800 SM01086 C-terminal, D2-small domain, of ClpB protein X998_RS08850 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain X998_RS08875 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain X998_RS08885 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain X998_RS08885 SM01232 X998_RS08885 X998_RS08890 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs X998_RS08890 SM00474 3'-5' exonuclease X998_RS08890 SM00475 5'-3' exonuclease X998_RS08890 SM00482 DNA polymerase A domain X998_RS08900 SM00387 Histidine kinase-like ATPases X998_RS08900 SM00388 His Kinase A (phosphoacceptor) domain X998_RS08905 SM00448 cheY-homologous receiver domain X998_RS08905 SM00862 Transcriptional regulatory protein, C terminal X998_RS08915 SM01329 X998_RS08915 X998_RS08960 SM00919 Malic enzyme, NAD binding domain X998_RS08960 SM01274 X998_RS08960 X998_RS08965 SM00481 DNA polymerase alpha chain like domain X998_RS08975 SM00116 Domain in cystathionine beta-synthase and other proteins. X998_RS09000 SM01002 Alanine dehydrogenase/PNT, C-terminal domain X998_RS09000 SM01003 Alanine dehydrogenase/PNT, N-terminal domain X998_RS09030 SM00981 X998_RS09030 X998_RS09050 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. X998_RS09055 SM00363 S4 RNA-binding domain X998_RS09055 SM01390 X998_RS09055 X998_RS09100 SM00563 Phosphate acyltransferases X998_RS09105 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. X998_RS09110 SM00363 S4 RNA-binding domain X998_RS09125 SM00725 NEAr Transporter domain X998_RS09155 SM00354 helix_turn _helix lactose operon repressor X998_RS09165 SM00830 Chorismate mutase type II X998_RS09190 SM00843 X998_RS09190 X998_RS09220 SM00849 Metallo-beta-lactamase superfamily X998_RS09250 SM00363 S4 RNA-binding domain X998_RS09270 SM00450 Rhodanese Homology Domain X998_RS09285 SM00729 Elongator protein 3, MiaB family, Radical SAM X998_RS09295 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS09350 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor X998_RS09360 SM00226 Low molecular weight phosphatase family X998_RS09365 SM00047 Lysozyme subfamily 2 X998_RS09445 SM01321 X998_RS09445 X998_RS09460 SM01234 X998_RS09460 X998_RS09480 SM00894 Excalibur calcium-binding domain X998_RS09620 SM00382 ATPases associated with a variety of cellular activities X998_RS09635 SM01260 X998_RS09635 X998_RS09760 SM00382 ATPases associated with a variety of cellular activities X998_RS09785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. X998_RS09815 SM00530 Helix-turn-helix XRE-family like proteins X998_RS09820 SM00421 helix_turn_helix, Lux Regulon X998_RS09820 SM00448 cheY-homologous receiver domain X998_RS09870 SM00382 ATPases associated with a variety of cellular activities X998_RS09875 SM00062 Bacterial periplasmic substrate-binding proteins X998_RS10070 SM00382 ATPases associated with a variety of cellular activities X998_RS10080 SM00478 endonuclease III X998_RS10150 SM00226 Low molecular weight phosphatase family X998_RS10165 SM00421 helix_turn_helix, Lux Regulon X998_RS10165 SM00448 cheY-homologous receiver domain X998_RS10170 SM00387 Histidine kinase-like ATPases X998_RS10230 SM00479 X998_RS10230 X998_RS10250 SM00046 Diacylglycerol kinase catalytic domain (presumed) X998_RS10260 SM00845 GatB domain X998_RS10285 SM00278 Helix-hairpin-helix DNA-binding motif class 1 X998_RS10285 SM00292 breast cancer carboxy-terminal domain X998_RS10285 SM00532 Ligase N family X998_RS10305 SM00998 Adenylosuccinate lyase C-terminus X998_RS10360 SM00710 Parallel beta-helix repeats X998_RS10370 SM01131 X998_RS10370 X998_RS10430 SM00382 ATPases associated with a variety of cellular activities X998_RS10440 SM00382 ATPases associated with a variety of cellular activities X998_RS10445 SM00345 helix_turn_helix gluconate operon transcriptional repressor X998_RS10545 SM00883 Chaperonin 10 Kd subunit X998_RS10575 SM00793 Accessory gene regulator B X998_RS10580 SM00794 Staphylococcal AgrD protein X998_RS10590 SM00448 cheY-homologous receiver domain X998_RS10590 SM00850 LytTr DNA-binding domain X998_RS10605 SM00640 Glycosyl hydrolases family 32 X998_RS10610 SM00354 helix_turn _helix lactose operon repressor X998_RS10630 SM00881 CoA binding domain X998_RS10635 SM00382 ATPases associated with a variety of cellular activities X998_RS10645 SM00534 ATPase domain of DNA mismatch repair MUTS family X998_RS10695 SM00917 LeuA allosteric (dimerisation) domain X998_RS10700 SM01329 X998_RS10700 X998_RS10750 SM00731 SprT homologues. X998_RS10755 SM00316 Ribosomal protein S1-like RNA-binding domain X998_RS10755 SM00732 Likely ribonuclease with RNase H fold. X998_RS10775 SM00331 Sigma factor PP2C-like phosphatases X998_RS10775 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain X998_RS10795 SM01005 Alanine racemase, C-terminal domain X998_RS10840 SM00387 Histidine kinase-like ATPases X998_RS10840 SM00388 His Kinase A (phosphoacceptor) domain X998_RS10845 SM00448 cheY-homologous receiver domain X998_RS10845 SM00862 Transcriptional regulatory protein, C terminal X998_RS10850 SM00487 DEAD-like helicases superfamily X998_RS10850 SM00490 helicase superfamily c-terminal domain X998_RS10885 SM00155 Phospholipase D. Active site motifs. X998_RS10890 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. X998_RS10975 SM00382 ATPases associated with a variety of cellular activities X998_RS11035 SM00226 Low molecular weight phosphatase family X998_RS11050 SM00937 X998_RS11050 X998_RS11065 SM00357 Cold shock protein domain X998_RS11065 SM00382 ATPases associated with a variety of cellular activities X998_RS11065 SM00959 Rho termination factor, N-terminal domain X998_RS11145 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain X998_RS11155 SM01133 X998_RS11155 X998_RS11195 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor X998_RS11235 SM00382 ATPases associated with a variety of cellular activities X998_RS11465 SM00829 Enoylreductase X998_RS11470 SM00829 Enoylreductase X998_RS11495 SM01133 X998_RS11495 X998_RS11515 SM00420 helix_turn_helix, Deoxyribose operon repressor X998_RS11515 SM01134 X998_RS11515 X998_RS11545 SM00422 helix_turn_helix, mercury resistance X998_RS11600 SM00382 ATPases associated with a variety of cellular activities X998_RS11645 SM00382 ATPases associated with a variety of cellular activities X998_RS11650 SM00382 ATPases associated with a variety of cellular activities X998_RS11660 SM00662 RNA polymerases D X998_RS11680 SM00316 Ribosomal protein S1-like RNA-binding domain X998_RS11735 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. X998_RS11740 SM01374 X998_RS11740 X998_RS11760 SM00322 K homology RNA-binding domain X998_RS11775 SM01382 X998_RS11775 X998_RS11775 SM01383 X998_RS11775 X998_RS11795 SM01403 X998_RS11795 X998_RS11810 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain X998_RS11810 SM00437 Bacterial DNA topoisomerase I DNA-binding domain X998_RS11810 SM00493 X998_RS11810 X998_RS11870 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS11900 SM00729 Elongator protein 3, MiaB family, Radical SAM X998_RS11925 SM00852 Probable molybdopterin binding domain X998_RS11935 SM00852 Probable molybdopterin binding domain X998_RS11945 SM00382 ATPases associated with a variety of cellular activities X998_RS12010 SM00988 UreE urease accessory protein, N-terminal domain X998_RS12050 SM00342 helix_turn_helix, arabinose operon control protein X998_RS12100 SM00047 Lysozyme subfamily 2 X998_RS12115 SM00926 Molybdopterin oxidoreductase Fe4S4 domain X998_RS12115 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region X998_RS12130 SM00420 helix_turn_helix, Deoxyribose operon repressor X998_RS12285 SM00382 ATPases associated with a variety of cellular activities X998_RS12370 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS12385 SM00382 ATPases associated with a variety of cellular activities X998_RS12395 SM00448 cheY-homologous receiver domain X998_RS12395 SM00862 Transcriptional regulatory protein, C terminal X998_RS12400 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain X998_RS12400 SM00387 Histidine kinase-like ATPases X998_RS12400 SM00388 His Kinase A (phosphoacceptor) domain X998_RS12405 SM00850 LytTr DNA-binding domain X998_RS12440 SM00829 Enoylreductase X998_RS12495 SM00342 helix_turn_helix, arabinose operon control protein X998_RS12520 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS12545 SM00422 helix_turn_helix, mercury resistance X998_RS12550 SM00421 helix_turn_helix, Lux Regulon X998_RS12550 SM00448 cheY-homologous receiver domain X998_RS12555 SM00387 Histidine kinase-like ATPases X998_RS12580 SM00926 Molybdopterin oxidoreductase Fe4S4 domain X998_RS12660 SM00382 ATPases associated with a variety of cellular activities X998_RS12670 SM00062 Bacterial periplasmic substrate-binding proteins X998_RS12670 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. X998_RS12690 SM00855 Phosphoglycerate mutase family X998_RS12745 SM00729 Elongator protein 3, MiaB family, Radical SAM X998_RS12745 SM00876 Biotin and Thiamin Synthesis associated domain X998_RS12770 SM00382 ATPases associated with a variety of cellular activities X998_RS12775 SM00382 ATPases associated with a variety of cellular activities X998_RS12810 SM00871 Bacterial transcription activator, effector binding domain X998_RS12890 SM00116 Domain in cystathionine beta-synthase and other proteins. X998_RS12890 SM00382 ATPases associated with a variety of cellular activities X998_RS12930 SM00382 ATPases associated with a variety of cellular activities X998_RS12975 SM00382 ATPases associated with a variety of cellular activities X998_RS12980 SM00382 ATPases associated with a variety of cellular activities X998_RS13110 SM00487 DEAD-like helicases superfamily X998_RS13110 SM00490 helicase superfamily c-terminal domain X998_RS13145 SM01208 X998_RS13145 X998_RS13190 SM00345 helix_turn_helix gluconate operon transcriptional repressor X998_RS13190 SM00895 X998_RS13190 X998_RS13195 SM00422 helix_turn_helix, mercury resistance X998_RS13200 SM00954 Region found in RelA / SpoT proteins X998_RS13235 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS13240 SM00382 ATPases associated with a variety of cellular activities X998_RS13275 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS13305 SM00382 ATPases associated with a variety of cellular activities X998_RS13440 SM00382 ATPases associated with a variety of cellular activities X998_RS13440 SM01086 C-terminal, D2-small domain, of ClpB protein X998_RS13455 SM00899 X998_RS13455 X998_RS13480 SM01266 X998_RS13480 X998_RS13680 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain X998_RS13865 SM00382 ATPases associated with a variety of cellular activities X998_RS13870 SM00387 Histidine kinase-like ATPases X998_RS13875 SM00448 cheY-homologous receiver domain X998_RS13875 SM00862 Transcriptional regulatory protein, C terminal X998_RS13890 SM00098 Alkaline phosphatase homologues X998_RS13895 SM00347 helix_turn_helix multiple antibiotic resistance protein X998_RS13980 SM00047 Lysozyme subfamily 2 X998_RS14005 SM00957 SecA DEAD-like domain X998_RS14005 SM00958 SecA preprotein cross-linking domain X998_RS14035 SM00903 Flavin reductase like domain X998_RS14055 SM00903 Flavin reductase like domain X998_RS14180 SM00382 ATPases associated with a variety of cellular activities X998_RS14195 SM00867 YceI-like domain X998_RS14205 SM00450 Rhodanese Homology Domain X998_RS14260 SM00382 ATPases associated with a variety of cellular activities X998_RS14290 SM00357 Cold shock protein domain X998_RS14295 SM00530 Helix-turn-helix XRE-family like proteins X998_RS14310 SM00470 ParB-like nuclease domain X998_RS14320 SM01228 X998_RS14320 X998_RS14340 SM01208 X998_RS14340