locus-tag class description SaO55_RS00005 PF00308 Bacterial dnaA protein SaO55_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SaO55_RS00005 PF11638 DnaA N-terminal domain SaO55_RS00010 PF02767 DNA polymerase III beta subunit, central domain SaO55_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SaO55_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SaO55_RS00020 PF02463 RecF/RecN/SMC N terminal domain SaO55_RS00025 PF01751 Toprim domain SaO55_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus SaO55_RS00025 PF00204 DNA gyrase B SaO55_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller SaO55_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A SaO55_RS00035 PF01256 Carbohydrate kinase SaO55_RS00040 PF00221 Aromatic amino acid lyase SaO55_RS00050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SaO55_RS00050 PF02403 Seryl-tRNA synthetase N-terminal domain SaO55_RS00065 PF00561 alpha/beta hydrolase fold SaO55_RS00075 PF01368 DHH family SaO55_RS00075 PF02272 DHHA1 domain SaO55_RS00080 PF01281 Ribosomal protein L9, N-terminal domain SaO55_RS00080 PF03948 Ribosomal protein L9, C-terminal domain SaO55_RS00085 PF03796 DnaB-like helicase C terminal domain SaO55_RS00085 PF00772 DnaB-like helicase N terminal domain SaO55_RS00095 PF00709 Adenylosuccinate synthetase SaO55_RS00110 PF00072 Response regulator receiver domain SaO55_RS00110 PF00486 Transcriptional regulatory protein, C terminal SaO55_RS00115 PF00672 HAMP domain SaO55_RS00115 PF13426 PAS domain SaO55_RS00115 PF00512 His Kinase A (phospho-acceptor) domain SaO55_RS00115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS00120 PF07435 YycH protein SaO55_RS00130 PF00753 Metallo-beta-lactamase superfamily SaO55_RS00135 PF00149 Calcineurin-like phosphoesterase SaO55_RS00135 PF02872 5'-nucleotidase, C-terminal domain SaO55_RS00140 PF02590 Predicted SPOUT methyltransferase SaO55_RS00155 PF02384 N-6 DNA Methylase SaO55_RS00160 PF01420 Type I restriction modification DNA specificity domain SaO55_RS00165 PF11867 Domain of unknown function (DUF3387) SaO55_RS00165 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SaO55_RS00165 PF18766 SWI2/SNF2 ATPase SaO55_RS00180 PF01207 Dihydrouridine synthase (Dus) SaO55_RS00185 PF01925 Sulfite exporter TauE/SafE SaO55_RS00190 PF02583 Metal-sensitive transcriptional repressor SaO55_RS00195 PF13686 DsrE/DsrF/DrsH-like family SaO55_RS00200 PF00753 Metallo-beta-lactamase superfamily SaO55_RS00220 PF01207 Dihydrouridine synthase (Dus) SaO55_RS00240 PF03358 NADPH-dependent FMN reductase SaO55_RS00255 PF00388 Phosphatidylinositol-specific phospholipase C, X domain SaO55_RS00265 PF12833 Helix-turn-helix domain SaO55_RS00270 PF01546 Peptidase family M20/M25/M40 SaO55_RS00270 PF07687 Peptidase dimerisation domain SaO55_RS00275 PF07690 Major Facilitator Superfamily SaO55_RS00280 PF02690 Na+/Pi-cotransporter SaO55_RS00285 PF06100 MCRA family SaO55_RS00290 PF00892 EamA-like transporter family SaO55_RS00295 PF00155 Aminotransferase class I and II SaO55_RS00295 PF00392 Bacterial regulatory proteins, gntR family SaO55_RS00305 PF02652 L-lactate permease SaO55_RS00310 PF03373 Octapeptide repeat SaO55_RS00310 PF04650 YSIRK type signal peptide SaO55_RS00310 PF01476 LysM domain SaO55_RS00310 PF00746 LPXTG cell wall anchor motif SaO55_RS00310 PF02216 B domain SaO55_RS00325 PF01032 FecCD transport family SaO55_RS00330 PF01032 FecCD transport family SaO55_RS00335 PF01497 Periplasmic binding protein SaO55_RS00340 PF00291 Pyridoxal-phosphate dependent enzyme SaO55_RS00345 PF02423 Ornithine cyclodeaminase/mu-crystallin family SaO55_RS00350 PF06276 Ferric iron reductase FhuF-like transporter SaO55_RS00350 PF04183 IucA / IucC family SaO55_RS00355 PF07690 Major Facilitator Superfamily SaO55_RS00355 PF00083 Sugar (and other) transporter SaO55_RS00360 PF04183 IucA / IucC family SaO55_RS00360 PF06276 Ferric iron reductase FhuF-like transporter SaO55_RS00365 PF06276 Ferric iron reductase FhuF-like transporter SaO55_RS00365 PF04183 IucA / IucC family SaO55_RS00370 PF03328 HpcH/HpaI aldolase/citrate lyase family SaO55_RS00375 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SaO55_RS00375 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SaO55_RS00380 PF02195 ParB-like nuclease domain SaO55_RS00410 PF01370 NAD dependent epimerase/dehydratase family SaO55_RS00415 PF02397 Bacterial sugar transferase SaO55_RS00420 PF00534 Glycosyl transferases group 1 SaO55_RS00435 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SaO55_RS00435 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SaO55_RS00440 PF00392 Bacterial regulatory proteins, gntR family SaO55_RS00440 PF07702 UTRA domain SaO55_RS00450 PF01048 Phosphorylase superfamily SaO55_RS00455 PF07690 Major Facilitator Superfamily SaO55_RS00465 PF01676 Metalloenzyme superfamily SaO55_RS00470 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS00475 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS00480 PF00005 ABC transporter SaO55_RS00495 PF02872 5'-nucleotidase, C-terminal domain SaO55_RS00495 PF00149 Calcineurin-like phosphoesterase SaO55_RS00510 PF00465 Iron-containing alcohol dehydrogenase SaO55_RS00510 PF00171 Aldehyde dehydrogenase family SaO55_RS00515 PF02706 Chain length determinant protein SaO55_RS00520 PF13614 AAA domain SaO55_RS00530 PF02719 Polysaccharide biosynthesis protein SaO55_RS00535 PF08485 Polysaccharide biosynthesis protein C-terminal SaO55_RS00535 PF02719 Polysaccharide biosynthesis protein SaO55_RS00540 PF01370 NAD dependent epimerase/dehydratase family SaO55_RS00545 PF02350 UDP-N-acetylglucosamine 2-epimerase SaO55_RS00550 PF00132 Bacterial transferase hexapeptide (six repeats) SaO55_RS00575 PF02397 Bacterial sugar transferase SaO55_RS00585 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SaO55_RS00585 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SaO55_RS00585 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SaO55_RS00590 PF02350 UDP-N-acetylglucosamine 2-epimerase SaO55_RS00595 PF03992 Antibiotic biosynthesis monooxygenase SaO55_RS00600 PF04304 Protein of unknown function (DUF454) SaO55_RS00605 PF00171 Aldehyde dehydrogenase family SaO55_RS00610 PF01545 Cation efflux family SaO55_RS00610 PF16916 Dimerisation domain of Zinc Transporter SaO55_RS00625 PF00005 ABC transporter SaO55_RS00635 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS00660 PF00975 Thioesterase domain SaO55_RS00660 PF00550 Phosphopantetheine attachment site SaO55_RS00660 PF00668 Condensation domain SaO55_RS00660 PF13193 AMP-binding enzyme C-terminal domain SaO55_RS00660 PF00501 AMP-binding enzyme SaO55_RS00670 PF07274 Protein of unknown function (DUF1440) SaO55_RS00675 PF00696 Amino acid kinase family SaO55_RS00680 PF01960 ArgJ family SaO55_RS00685 PF01118 Semialdehyde dehydrogenase, NAD binding domain SaO55_RS00685 PF02774 Semialdehyde dehydrogenase, dimerisation domain SaO55_RS00690 PF00202 Aminotransferase class-III SaO55_RS00695 PF05525 Branched-chain amino acid transport protein SaO55_RS00700 PF00857 Isochorismatase family SaO55_RS00705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SaO55_RS00705 PF00205 Thiamine pyrophosphate enzyme, central domain SaO55_RS00705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SaO55_RS00715 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SaO55_RS00715 PF02378 Phosphotransferase system, EIIC SaO55_RS00715 PF00367 phosphotransferase system, EIIB SaO55_RS00730 PF02378 Phosphotransferase system, EIIC SaO55_RS00730 PF00367 phosphotransferase system, EIIB SaO55_RS00735 PF01380 SIS domain SaO55_RS00735 PF01418 Helix-turn-helix domain, rpiR family SaO55_RS00745 PF18766 SWI2/SNF2 ATPase SaO55_RS00745 PF12008 Type I restriction and modification enzyme - subunit R C terminal SaO55_RS00745 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SaO55_RS00765 PF00005 ABC transporter SaO55_RS00765 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SaO55_RS00770 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS00775 PF12911 N-terminal TM domain of oligopeptide transport permease C SaO55_RS00775 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS00790 PF02525 Flavodoxin-like fold SaO55_RS00795 PF08460 Bacterial SH3 domain SaO55_RS00795 PF01551 Peptidase family M23 SaO55_RS00800 PF03459 TOBE domain SaO55_RS00800 PF00005 ABC transporter SaO55_RS00800 PF17912 MalK OB fold domain SaO55_RS00810 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS00815 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS00825 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SaO55_RS00825 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SaO55_RS00830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SaO55_RS00830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SaO55_RS00840 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SaO55_RS00845 PF07690 Major Facilitator Superfamily SaO55_RS00850 PF00072 Response regulator receiver domain SaO55_RS00850 PF12833 Helix-turn-helix domain SaO55_RS00855 PF06580 Histidine kinase SaO55_RS00865 PF01228 Glycine radical SaO55_RS00865 PF02901 Pyruvate formate lyase-like SaO55_RS00870 PF04055 Radical SAM superfamily SaO55_RS00890 PF04022 Staphylocoagulase repeat SaO55_RS00890 PF08764 Staphylococcus aureus coagulase SaO55_RS00900 PF02803 Thiolase, C-terminal domain SaO55_RS00900 PF00108 Thiolase, N-terminal domain SaO55_RS00905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SaO55_RS00905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SaO55_RS00910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SaO55_RS00910 PF02770 Acyl-CoA dehydrogenase, middle domain SaO55_RS00910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SaO55_RS00915 PF13193 AMP-binding enzyme C-terminal domain SaO55_RS00915 PF00501 AMP-binding enzyme SaO55_RS00920 PF01144 Coenzyme A transferase SaO55_RS00930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SaO55_RS00935 PF04343 Protein of unknown function, DUF488 SaO55_RS00950 PF00970 Oxidoreductase FAD-binding domain SaO55_RS00950 PF00042 Globin SaO55_RS00950 PF00175 Oxidoreductase NAD-binding domain SaO55_RS00960 PF00056 lactate/malate dehydrogenase, NAD binding domain SaO55_RS00960 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SaO55_RS00970 PF02378 Phosphotransferase system, EIIC SaO55_RS00970 PF00367 phosphotransferase system, EIIB SaO55_RS00970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SaO55_RS00975 PF01156 Inosine-uridine preferring nucleoside hydrolase SaO55_RS00995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SaO55_RS01000 PF03611 PTS system sugar-specific permease component SaO55_RS01005 PF08240 Alcohol dehydrogenase GroES-like domain SaO55_RS01005 PF00107 Zinc-binding dehydrogenase SaO55_RS01015 PF00107 Zinc-binding dehydrogenase SaO55_RS01015 PF08240 Alcohol dehydrogenase GroES-like domain SaO55_RS01020 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SaO55_RS01025 PF08240 Alcohol dehydrogenase GroES-like domain SaO55_RS01025 PF00107 Zinc-binding dehydrogenase SaO55_RS01030 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SaO55_RS01035 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SaO55_RS01040 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SaO55_RS01045 PF00107 Zinc-binding dehydrogenase SaO55_RS01045 PF08240 Alcohol dehydrogenase GroES-like domain SaO55_RS01050 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SaO55_RS01055 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SaO55_RS01055 PF00535 Glycosyl transferase family 2 SaO55_RS01060 PF04405 Domain of Unknown function (DUF542) SaO55_RS01060 PF01814 Hemerythrin HHE cation binding domain SaO55_RS01065 PF07694 5TMR of 5TMR-LYT SaO55_RS01065 PF06580 Histidine kinase SaO55_RS01065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS01070 PF00072 Response regulator receiver domain SaO55_RS01070 PF04397 LytTr DNA-binding domain SaO55_RS01075 PF03788 LrgA family SaO55_RS01080 PF04172 LrgB-like family SaO55_RS01085 PF00115 Cytochrome C and Quinol oxidase polypeptide I SaO55_RS01090 PF00392 Bacterial regulatory proteins, gntR family SaO55_RS01090 PF00155 Aminotransferase class I and II SaO55_RS01100 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SaO55_RS01100 PF02378 Phosphotransferase system, EIIC SaO55_RS01100 PF00367 phosphotransferase system, EIIB SaO55_RS01105 PF00232 Glycosyl hydrolase family 1 SaO55_RS01120 PF13649 Methyltransferase domain SaO55_RS01130 PF00294 pfkB family carbohydrate kinase SaO55_RS01135 PF05025 RbsD / FucU transport protein family SaO55_RS01140 PF06800 Sugar transport protein SaO55_RS01145 PF00356 Bacterial regulatory proteins, lacI family SaO55_RS01145 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SaO55_RS01155 PF07690 Major Facilitator Superfamily SaO55_RS01160 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family SaO55_RS01165 PF01551 Peptidase family M23 SaO55_RS01170 PF00005 ABC transporter SaO55_RS01190 PF01476 LysM domain SaO55_RS01190 PF05257 CHAP domain SaO55_RS01195 PF06013 Proteins of 100 residues with WXG SaO55_RS01205 PF10661 WXG100 protein secretion system (Wss), protein EssA SaO55_RS01210 PF08817 WXG100 protein secretion system (Wss), protein YukD SaO55_RS01215 PF10140 WXG100 protein secretion system (Wss), protein YukC SaO55_RS01220 PF12538 DNA transporter SaO55_RS01220 PF01580 FtsK/SpoIIIE family SaO55_RS01265 PF04634 Protein of unknown function, DUF600 SaO55_RS01270 PF04634 Protein of unknown function, DUF600 SaO55_RS01275 PF04634 Protein of unknown function, DUF600 SaO55_RS01280 PF04634 Protein of unknown function, DUF600 SaO55_RS01285 PF04634 Protein of unknown function, DUF600 SaO55_RS01305 PF05525 Branched-chain amino acid transport protein SaO55_RS01315 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SaO55_RS01325 PF02687 FtsX-like permease family SaO55_RS01330 PF00005 ABC transporter SaO55_RS01350 PF04227 Indigoidine synthase A like protein SaO55_RS01355 PF07662 Na+ dependent nucleoside transporter C-terminus SaO55_RS01355 PF01773 Na+ dependent nucleoside transporter N-terminus SaO55_RS01360 PF00474 Sodium:solute symporter family SaO55_RS01365 PF00701 Dihydrodipicolinate synthetase family SaO55_RS01370 PF00480 ROK family SaO55_RS01375 PF01418 Helix-turn-helix domain, rpiR family SaO55_RS01375 PF01380 SIS domain SaO55_RS01380 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SaO55_RS01385 PF07670 Nucleoside recognition SaO55_RS01390 PF04650 YSIRK type signal peptide SaO55_RS01405 PF14659 Phage integrase, N-terminal SAM-like domain SaO55_RS01405 PF00589 Phage integrase family SaO55_RS01425 PF01381 Helix-turn-helix SaO55_RS01475 PF00476 DNA polymerase family A SaO55_RS01475 PF09281 Taq polymerase, exonuclease SaO55_RS01475 PF01367 5'-3' exonuclease, C-terminal SAM fold SaO55_RS01475 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SaO55_RS01600 PF00574 Clp protease SaO55_RS01650 PF01464 Transglycosylase SLT domain SaO55_RS01710 PF08460 Bacterial SH3 domain SaO55_RS01710 PF01520 N-acetylmuramoyl-L-alanine amidase SaO55_RS01710 PF05257 CHAP domain SaO55_RS01725 PF04650 YSIRK type signal peptide SaO55_RS01735 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SaO55_RS01745 PF00296 Luciferase-like monooxygenase SaO55_RS01750 PF01597 Glycine cleavage H-protein SaO55_RS01755 PF01661 Macro domain SaO55_RS01765 PF03099 Biotin/lipoate A/B protein ligase family SaO55_RS01765 PF10437 Bacterial lipoate protein ligase C-terminus SaO55_RS01770 PF03611 PTS system sugar-specific permease component SaO55_RS01780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SaO55_RS01785 PF00874 PRD domain SaO55_RS01785 PF03123 CAT RNA binding domain SaO55_RS01800 PF01554 MatE SaO55_RS01810 PF07690 Major Facilitator Superfamily SaO55_RS01820 PF00296 Luciferase-like monooxygenase SaO55_RS01825 PF03358 NADPH-dependent FMN reductase SaO55_RS01830 PF03601 Conserved hypothetical protein 698 SaO55_RS01835 PF13302 Acetyltransferase (GNAT) domain SaO55_RS01840 PF09375 Imelysin SaO55_RS01845 PF04261 Dyp-type peroxidase family SaO55_RS01850 PF03239 Iron permease FTR1 family SaO55_RS01860 PF00902 Sec-independent protein translocase protein (TatC) SaO55_RS01865 PF02416 mttA/Hcf106 family SaO55_RS01875 PF01381 Helix-turn-helix SaO55_RS01885 PF00005 ABC transporter SaO55_RS01900 PF02803 Thiolase, C-terminal domain SaO55_RS01900 PF00108 Thiolase, N-terminal domain SaO55_RS01910 PF08267 Cobalamin-independent synthase, N-terminal domain SaO55_RS01910 PF01717 Cobalamin-independent synthase, Catalytic domain SaO55_RS01915 PF02219 Methylenetetrahydrofolate reductase SaO55_RS01915 PF02574 Homocysteine S-methyltransferase SaO55_RS01920 PF01053 Cys/Met metabolism PLP-dependent enzyme SaO55_RS01925 PF01053 Cys/Met metabolism PLP-dependent enzyme SaO55_RS01935 PF02195 ParB-like nuclease domain SaO55_RS01935 PF17762 HTH domain found in ParB protein SaO55_RS01940 PF00924 Mechanosensitive ion channel SaO55_RS01945 PF06107 Bacterial protein of unknown function (DUF951) SaO55_RS01950 PF06071 Protein of unknown function (DUF933) SaO55_RS01950 PF01926 50S ribosome-binding GTPase SaO55_RS01965 PF01250 Ribosomal protein S6 SaO55_RS01970 PF00436 Single-strand binding protein family SaO55_RS01975 PF01084 Ribosomal protein S18 SaO55_RS01985 PF02899 Phage integrase, N-terminal SAM-like domain SaO55_RS01985 PF00589 Phage integrase family SaO55_RS01990 PF00589 Phage integrase family SaO55_RS01990 PF14659 Phage integrase, N-terminal SAM-like domain SaO55_RS02050 PF13192 Thioredoxin domain SaO55_RS02050 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS02055 PF10417 C-terminal domain of 1-Cys peroxiredoxin SaO55_RS02055 PF00578 AhpC/TSA family SaO55_RS02060 PF00881 Nitroreductase family SaO55_RS02065 PF00375 Sodium:dicarboxylate symporter family SaO55_RS02090 PF11181 Heat induced stress protein YflT SaO55_RS02100 PF00860 Permease family SaO55_RS02105 PF00571 CBS domain SaO55_RS02105 PF00478 IMP dehydrogenase / GMP reductase domain SaO55_RS02110 PF00958 GMP synthase C terminal domain SaO55_RS02110 PF00117 Glutamine amidotransferase class-I SaO55_RS02115 PF14659 Phage integrase, N-terminal SAM-like domain SaO55_RS02115 PF00589 Phage integrase family SaO55_RS02190 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02195 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02230 PF04463 Protein of unknown function (DUF523) SaO55_RS02235 PF06993 Protein of unknown function (DUF1304) SaO55_RS02250 PF09199 Staphylococcal superantigen-like OB-fold domain SaO55_RS02250 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02255 PF09199 Staphylococcal superantigen-like OB-fold domain SaO55_RS02255 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02260 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02260 PF09199 Staphylococcal superantigen-like OB-fold domain SaO55_RS02270 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02270 PF09199 Staphylococcal superantigen-like OB-fold domain SaO55_RS02275 PF09199 Staphylococcal superantigen-like OB-fold domain SaO55_RS02275 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02280 PF09199 Staphylococcal superantigen-like OB-fold domain SaO55_RS02280 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02290 PF09199 Staphylococcal superantigen-like OB-fold domain SaO55_RS02290 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02295 PF09199 Staphylococcal superantigen-like OB-fold domain SaO55_RS02295 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02300 PF09199 Staphylococcal superantigen-like OB-fold domain SaO55_RS02300 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02315 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS02315 PF09199 Staphylococcal superantigen-like OB-fold domain SaO55_RS02330 PF04507 Csa1 family SaO55_RS02335 PF04507 Csa1 family SaO55_RS02340 PF04507 Csa1 family SaO55_RS02345 PF04507 Csa1 family SaO55_RS02350 PF04507 Csa1 family SaO55_RS02355 PF04507 Csa1 family SaO55_RS02360 PF04507 Csa1 family SaO55_RS02385 PF02492 CobW/HypB/UreG, nucleotide-binding domain SaO55_RS02385 PF07683 Cobalamin synthesis protein cobW C-terminal domain SaO55_RS02390 PF17063 Phenol-soluble modulin alpha 4 peptide SaO55_RS02410 PF00361 Proton-conducting membrane transporter SaO55_RS02410 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SaO55_RS02415 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) SaO55_RS02420 PF10057 Uncharacterized conserved protein (DUF2294) SaO55_RS02435 PF12146 Serine aminopeptidase, S33 SaO55_RS02440 PF00209 Sodium:neurotransmitter symporter family SaO55_RS02445 PF00291 Pyridoxal-phosphate dependent enzyme SaO55_RS02450 PF01053 Cys/Met metabolism PLP-dependent enzyme SaO55_RS02455 PF00005 ABC transporter SaO55_RS02455 PF09383 NIL domain SaO55_RS02460 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS02465 PF03180 NLPA lipoprotein SaO55_RS02470 PF01476 LysM domain SaO55_RS02470 PF05257 CHAP domain SaO55_RS02500 PF03466 LysR substrate binding domain SaO55_RS02500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SaO55_RS02505 PF00310 Glutamine amidotransferases class-II SaO55_RS02505 PF01645 Conserved region in glutamate synthase SaO55_RS02505 PF04898 Glutamate synthase central domain SaO55_RS02505 PF01493 GXGXG motif SaO55_RS02510 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SaO55_RS02510 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS02520 PF02378 Phosphotransferase system, EIIC SaO55_RS02520 PF00367 phosphotransferase system, EIIB SaO55_RS02525 PF00128 Alpha amylase, catalytic domain SaO55_RS02525 PF16657 Maltogenic Amylase, C-terminal domain SaO55_RS02530 PF00392 Bacterial regulatory proteins, gntR family SaO55_RS02530 PF07702 UTRA domain SaO55_RS02550 PF12169 DNA polymerase III subunits gamma and tau domain III SaO55_RS02555 PF02575 YbaB/EbfC DNA-binding family SaO55_RS02560 PF13662 Toprim domain SaO55_RS02560 PF02132 RecR protein SaO55_RS02590 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SaO55_RS02590 PF01276 Orn/Lys/Arg decarboxylase, major domain SaO55_RS02595 PF02223 Thymidylate kinase SaO55_RS02600 PF06153 Cyclic-di-AMP receptor SaO55_RS02605 PF09115 DNA polymerase III, delta subunit, C terminal SaO55_RS02610 PF04468 PSP1 C-terminal conserved region SaO55_RS02615 PF06156 Initiation control protein YabA SaO55_RS02620 PF05175 Methyltransferase small domain SaO55_RS02625 PF01541 GIY-YIG catalytic domain SaO55_RS02630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SaO55_RS02635 PF08264 Anticodon-binding domain of tRNA SaO55_RS02635 PF01588 Putative tRNA binding domain SaO55_RS02635 PF09334 tRNA synthetases class I (M) SaO55_RS02640 PF01026 TatD related DNase SaO55_RS02645 PF13331 Domain of unknown function (DUF4093) SaO55_RS02645 PF01751 Toprim domain SaO55_RS02650 PF00398 Ribosomal RNA adenine dimethylase SaO55_RS02655 PF06257 Biofilm formation stimulator VEG SaO55_RS02660 PF00288 GHMP kinases N terminal domain SaO55_RS02660 PF08544 GHMP kinases C terminal SaO55_RS02665 PF00156 Phosphoribosyl transferase domain SaO55_RS02665 PF09182 Bacterial purine repressor, N-terminal SaO55_RS02670 PF01042 Endoribonuclease L-PSP SaO55_RS02675 PF04026 SpoVG SaO55_RS02685 PF00132 Bacterial transferase hexapeptide (six repeats) SaO55_RS02685 PF00483 Nucleotidyl transferase SaO55_RS02690 PF14572 Phosphoribosyl synthetase-associated domain SaO55_RS02690 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SaO55_RS02700 PF01386 Ribosomal L25p family SaO55_RS02700 PF14693 Ribosomal protein TL5, C-terminal domain SaO55_RS02705 PF01195 Peptidyl-tRNA hydrolase SaO55_RS02710 PF02559 CarD-like/TRCF domain SaO55_RS02710 PF00270 DEAD/DEAH box helicase SaO55_RS02710 PF00271 Helicase conserved C-terminal domain SaO55_RS02710 PF03461 TRCF domain SaO55_RS02710 PF17757 UvrB interaction domain SaO55_RS02715 PF14667 Polysaccharide biosynthesis C-terminal domain SaO55_RS02715 PF01943 Polysaccharide biosynthesis protein SaO55_RS02720 PF03819 MazG nucleotide pyrophosphohydrolase domain SaO55_RS02720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SaO55_RS02725 PF01479 S4 domain SaO55_RS02735 PF00575 S1 RNA binding domain SaO55_RS02740 PF11734 TilS substrate C-terminal domain SaO55_RS02740 PF01171 PP-loop family SaO55_RS02745 PF00156 Phosphoribosyl transferase domain SaO55_RS02750 PF00004 ATPase family associated with various cellular activities (AAA) SaO55_RS02750 PF17862 AAA+ lid domain SaO55_RS02750 PF06480 FtsH Extracellular SaO55_RS02750 PF01434 Peptidase family M41 SaO55_RS02765 PF01430 Hsp33 protein SaO55_RS02770 PF00291 Pyridoxal-phosphate dependent enzyme SaO55_RS02775 PF00809 Pterin binding enzyme SaO55_RS02780 PF02152 Dihydroneopterin aldolase SaO55_RS02785 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SaO55_RS02795 PF00152 tRNA synthetases class II (D, K and N) SaO55_RS02795 PF01336 OB-fold nucleic acid binding domain SaO55_RS02860 PF00392 Bacterial regulatory proteins, gntR family SaO55_RS02860 PF00155 Aminotransferase class I and II SaO55_RS02865 PF01680 SOR/SNZ family SaO55_RS02870 PF01174 SNO glutamine amidotransferase family SaO55_RS02875 PF07662 Na+ dependent nucleoside transporter C-terminus SaO55_RS02875 PF01773 Na+ dependent nucleoside transporter N-terminus SaO55_RS02880 PF05848 CtsR N-terminal HTH domain SaO55_RS02880 PF17727 CtsR C-terminal dimerization domain SaO55_RS02885 PF02151 UvrB/uvrC motif SaO55_RS02890 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain SaO55_RS02895 PF00004 ATPase family associated with various cellular activities (AAA) SaO55_RS02895 PF10431 C-terminal, D2-small domain, of ClpB protein SaO55_RS02895 PF07724 AAA domain (Cdc48 subfamily) SaO55_RS02895 PF17871 AAA lid domain SaO55_RS02895 PF02861 Clp amino terminal domain, pathogenicity island component SaO55_RS02900 PF18073 Rubredoxin metal binding domain SaO55_RS02910 PF00749 tRNA synthetases class I (E and Q), catalytic domain SaO55_RS02920 PF00132 Bacterial transferase hexapeptide (six repeats) SaO55_RS02925 PF09190 DALR domain SaO55_RS02925 PF01406 tRNA synthetases class I (C) catalytic domain SaO55_RS02930 PF00636 Ribonuclease III domain SaO55_RS02935 PF00588 SpoU rRNA Methylase family SaO55_RS02935 PF08032 RNA 2'-O ribose methyltransferase substrate binding SaO55_RS02950 PF00471 Ribosomal protein L33 SaO55_RS02955 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SaO55_RS02960 PF02357 Transcription termination factor nusG SaO55_RS02960 PF00467 KOW motif SaO55_RS02965 PF00298 Ribosomal protein L11, RNA binding domain SaO55_RS02965 PF03946 Ribosomal protein L11, N-terminal domain SaO55_RS02970 PF00687 Ribosomal protein L1p/L10e family SaO55_RS02980 PF00466 Ribosomal protein L10 SaO55_RS02985 PF00542 Ribosomal protein L7/L12 C-terminal domain SaO55_RS02985 PF16320 Ribosomal protein L7/L12 dimerisation domain SaO55_RS02990 PF05175 Methyltransferase small domain SaO55_RS02995 PF04561 RNA polymerase Rpb2, domain 2 SaO55_RS02995 PF00562 RNA polymerase Rpb2, domain 6 SaO55_RS02995 PF04563 RNA polymerase beta subunit SaO55_RS02995 PF04560 RNA polymerase Rpb2, domain 7 SaO55_RS02995 PF10385 RNA polymerase beta subunit external 1 domain SaO55_RS02995 PF04565 RNA polymerase Rpb2, domain 3 SaO55_RS03000 PF04997 RNA polymerase Rpb1, domain 1 SaO55_RS03000 PF04998 RNA polymerase Rpb1, domain 5 SaO55_RS03000 PF05000 RNA polymerase Rpb1, domain 4 SaO55_RS03000 PF04983 RNA polymerase Rpb1, domain 3 SaO55_RS03000 PF00623 RNA polymerase Rpb1, domain 2 SaO55_RS03005 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SaO55_RS03010 PF00164 Ribosomal protein S12/S23 SaO55_RS03015 PF00177 Ribosomal protein S7p/S5e SaO55_RS03020 PF00009 Elongation factor Tu GTP binding domain SaO55_RS03020 PF00679 Elongation factor G C-terminus SaO55_RS03020 PF14492 Elongation Factor G, domain II SaO55_RS03020 PF03764 Elongation factor G, domain IV SaO55_RS03020 PF03144 Elongation factor Tu domain 2 SaO55_RS03025 PF00009 Elongation factor Tu GTP binding domain SaO55_RS03025 PF03143 Elongation factor Tu C-terminal domain SaO55_RS03025 PF03144 Elongation factor Tu domain 2 SaO55_RS03030 PF07687 Peptidase dimerisation domain SaO55_RS03030 PF01546 Peptidase family M20/M25/M40 SaO55_RS03035 PF00155 Aminotransferase class I and II SaO55_RS03040 PF01965 DJ-1/PfpI family SaO55_RS03045 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SaO55_RS03045 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SaO55_RS03050 PF01370 NAD dependent epimerase/dehydratase family SaO55_RS03055 PF01063 Amino-transferase class IV SaO55_RS03070 PF01712 Deoxynucleoside kinase SaO55_RS03075 PF01712 Deoxynucleoside kinase SaO55_RS03080 PF14437 MafB19-like deaminase SaO55_RS03090 PF03358 NADPH-dependent FMN reductase SaO55_RS03105 PF04650 YSIRK type signal peptide SaO55_RS03105 PF17210 SdrD B-like domain SaO55_RS03105 PF00746 LPXTG cell wall anchor motif SaO55_RS03105 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SaO55_RS03105 PF17961 Bacterial Ig domain SaO55_RS03110 PF00746 LPXTG cell wall anchor motif SaO55_RS03110 PF17961 Bacterial Ig domain SaO55_RS03110 PF04650 YSIRK type signal peptide SaO55_RS03110 PF17210 SdrD B-like domain SaO55_RS03110 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SaO55_RS03115 PF00534 Glycosyl transferases group 1 SaO55_RS03125 PF02649 Type I GTP cyclohydrolase folE2 SaO55_RS03130 PF02585 GlcNAc-PI de-N-acetylase SaO55_RS03140 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SaO55_RS03145 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SaO55_RS03150 PF01380 SIS domain SaO55_RS03165 PF07690 Major Facilitator Superfamily SaO55_RS03175 PF13193 AMP-binding enzyme C-terminal domain SaO55_RS03175 PF00501 AMP-binding enzyme SaO55_RS03180 PF00108 Thiolase, N-terminal domain SaO55_RS03180 PF02803 Thiolase, C-terminal domain SaO55_RS03195 PF17412 Family of unknown function SaO55_RS03200 PF08543 Phosphomethylpyrimidine kinase SaO55_RS03205 PF03167 Uracil DNA glycosylase superfamily SaO55_RS03245 PF06778 Chlorite dismutase SaO55_RS03250 PF01515 Phosphate acetyl/butaryl transferase SaO55_RS03255 PF03099 Biotin/lipoate A/B protein ligase family SaO55_RS03260 PF08544 GHMP kinases C terminal SaO55_RS03260 PF00288 GHMP kinases N terminal domain SaO55_RS03270 PF00288 GHMP kinases N terminal domain SaO55_RS03270 PF08544 GHMP kinases C terminal SaO55_RS03275 PF07293 Protein of unknown function (DUF1450) SaO55_RS03280 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS03280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SaO55_RS03325 PF00248 Aldo/keto reductase family SaO55_RS03330 PF03358 NADPH-dependent FMN reductase SaO55_RS03340 PF01966 HD domain SaO55_RS03345 PF08741 YwhD family SaO55_RS03350 PF08240 Alcohol dehydrogenase GroES-like domain SaO55_RS03350 PF00107 Zinc-binding dehydrogenase SaO55_RS03365 PF05746 DALR anticodon binding domain SaO55_RS03365 PF00750 tRNA synthetases class I (R) SaO55_RS03365 PF03485 Arginyl tRNA synthetase N terminal domain SaO55_RS03375 PF01497 Periplasmic binding protein SaO55_RS03380 PF01032 FecCD transport family SaO55_RS03385 PF13419 Haloacid dehalogenase-like hydrolase SaO55_RS03390 PF00561 alpha/beta hydrolase fold SaO55_RS03405 PF12697 Alpha/beta hydrolase family SaO55_RS03430 PF00589 Phage integrase family SaO55_RS03435 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SaO55_RS03435 PF13244 Domain of unknown function (DUF4040) SaO55_RS03435 PF00361 Proton-conducting membrane transporter SaO55_RS03440 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SaO55_RS03445 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SaO55_RS03450 PF00361 Proton-conducting membrane transporter SaO55_RS03455 PF01899 Na+/H+ ion antiporter subunit SaO55_RS03460 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SaO55_RS03465 PF03334 Na+/H+ antiporter subunit SaO55_RS03470 PF00999 Sodium/hydrogen exchanger family SaO55_RS03475 PF01297 Zinc-uptake complex component A periplasmic SaO55_RS03480 PF00950 ABC 3 transport family SaO55_RS03485 PF00005 ABC transporter SaO55_RS03490 PF01325 Iron dependent repressor, N-terminal DNA binding domain SaO55_RS03490 PF02742 Iron dependent repressor, metal binding and dimerisation domain SaO55_RS03490 PF18357 Diphteria toxin repressor SH3 domain SaO55_RS03500 PF03808 Glycosyl transferase WecB/TagA/CpsF family SaO55_RS03505 PF00005 ABC transporter SaO55_RS03510 PF01061 ABC-2 type transporter SaO55_RS03515 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SaO55_RS03520 PF00535 Glycosyl transferase family 2 SaO55_RS03525 PF01467 Cytidylyltransferase-like SaO55_RS03530 PF00768 D-alanyl-D-alanine carboxypeptidase SaO55_RS03530 PF07943 Penicillin-binding protein 5, C-terminal domain SaO55_RS03535 PF00664 ABC transporter transmembrane region SaO55_RS03535 PF00005 ABC transporter SaO55_RS03540 PF07662 Na+ dependent nucleoside transporter C-terminus SaO55_RS03540 PF01773 Na+ dependent nucleoside transporter N-terminus SaO55_RS03550 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SaO55_RS03550 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SaO55_RS03555 PF00005 ABC transporter SaO55_RS03560 PF01032 FecCD transport family SaO55_RS03565 PF01032 FecCD transport family SaO55_RS03570 PF02733 Dak1 domain SaO55_RS03575 PF02734 DAK2 domain SaO55_RS03580 PF03610 PTS system fructose IIA component SaO55_RS03610 PF01370 NAD dependent epimerase/dehydratase family SaO55_RS03615 PF00072 Response regulator receiver domain SaO55_RS03615 PF00486 Transcriptional regulatory protein, C terminal SaO55_RS03620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS03625 PF00005 ABC transporter SaO55_RS03630 PF02687 FtsX-like permease family SaO55_RS03635 PF01865 Protein of unknown function DUF47 SaO55_RS03640 PF01384 Phosphate transporter family SaO55_RS03645 PF05257 CHAP domain SaO55_RS03645 PF01476 LysM domain SaO55_RS03655 PF02311 AraC-like ligand binding domain SaO55_RS03655 PF12833 Helix-turn-helix domain SaO55_RS03665 PF01709 Transcriptional regulator SaO55_RS03685 PF03466 LysR substrate binding domain SaO55_RS03685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SaO55_RS03695 PF07690 Major Facilitator Superfamily SaO55_RS03700 PF04306 Protein of unknown function (DUF456) SaO55_RS03725 PF13302 Acetyltransferase (GNAT) domain SaO55_RS03730 PF03641 Possible lysine decarboxylase SaO55_RS03735 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SaO55_RS03745 PF02673 Bacitracin resistance protein BacA SaO55_RS03750 PF00664 ABC transporter transmembrane region SaO55_RS03750 PF00005 ABC transporter SaO55_RS03755 PF00664 ABC transporter transmembrane region SaO55_RS03755 PF00005 ABC transporter SaO55_RS03760 PF01047 MarR family SaO55_RS03765 PF07683 Cobalamin synthesis protein cobW C-terminal domain SaO55_RS03765 PF02492 CobW/HypB/UreG, nucleotide-binding domain SaO55_RS03770 PF00248 Aldo/keto reductase family SaO55_RS03780 PF00939 Sodium:sulfate symporter transmembrane region SaO55_RS03785 PF00875 DNA photolyase SaO55_RS03785 PF03441 FAD binding domain of DNA photolyase SaO55_RS03805 PF07690 Major Facilitator Superfamily SaO55_RS03815 PF04073 Aminoacyl-tRNA editing domain SaO55_RS03820 PF00455 DeoR C terminal sensor domain SaO55_RS03820 PF08220 DeoR-like helix-turn-helix domain SaO55_RS03825 PF00294 pfkB family carbohydrate kinase SaO55_RS03830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SaO55_RS03830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SaO55_RS03835 PF01979 Amidohydrolase family SaO55_RS03840 PF03471 Transporter associated domain SaO55_RS03840 PF00571 CBS domain SaO55_RS03840 PF01595 Cyclin M transmembrane N-terminal domain SaO55_RS03845 PF00248 Aldo/keto reductase family SaO55_RS03850 PF00535 Glycosyl transferase family 2 SaO55_RS03855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS03855 PF00512 His Kinase A (phospho-acceptor) domain SaO55_RS03860 PF00486 Transcriptional regulatory protein, C terminal SaO55_RS03860 PF00072 Response regulator receiver domain SaO55_RS03880 PF04055 Radical SAM superfamily SaO55_RS03885 PF01242 6-pyruvoyl tetrahydropterin synthase SaO55_RS03890 PF06508 Queuosine biosynthesis protein QueC SaO55_RS03895 PF02885 Glycosyl transferase family, helical bundle domain SaO55_RS03895 PF00117 Glutamine amidotransferase class-I SaO55_RS03895 PF00591 Glycosyl transferase family, a/b domain SaO55_RS03900 PF00425 chorismate binding enzyme SaO55_RS03900 PF04715 Anthranilate synthase component I, N terminal region SaO55_RS03925 PF00884 Sulfatase SaO55_RS03930 PF16326 ABC transporter C-terminal domain SaO55_RS03930 PF00005 ABC transporter SaO55_RS03930 PF12848 ABC transporter SaO55_RS03935 PF16124 RecQ zinc-binding SaO55_RS03935 PF00270 DEAD/DEAH box helicase SaO55_RS03935 PF00271 Helicase conserved C-terminal domain SaO55_RS03935 PF09382 RQC domain SaO55_RS03935 PF00570 HRDC domain SaO55_RS03940 PF00571 CBS domain SaO55_RS03940 PF00005 ABC transporter SaO55_RS03945 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS03950 PF00155 Aminotransferase class I and II SaO55_RS03955 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) SaO55_RS03965 PF00781 Diacylglycerol kinase catalytic domain SaO55_RS03970 PF00854 POT family SaO55_RS03980 PF14489 QueF-like protein SaO55_RS03995 PF07972 NrdI Flavodoxin like SaO55_RS04000 PF00317 Ribonucleotide reductase, all-alpha domain SaO55_RS04000 PF02867 Ribonucleotide reductase, barrel domain SaO55_RS04000 PF08343 Ribonucleotide reductase N-terminal SaO55_RS04005 PF00268 Ribonucleotide reductase, small chain SaO55_RS04015 PF01032 FecCD transport family SaO55_RS04020 PF01032 FecCD transport family SaO55_RS04030 PF01497 Periplasmic binding protein SaO55_RS04040 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SaO55_RS04040 PF01565 FAD binding domain SaO55_RS04060 PF02595 Glycerate kinase family SaO55_RS04065 PF01546 Peptidase family M20/M25/M40 SaO55_RS04065 PF07687 Peptidase dimerisation domain SaO55_RS04080 PF07694 5TMR of 5TMR-LYT SaO55_RS04080 PF00990 Diguanylate cyclase, GGDEF domain SaO55_RS04085 PF00953 Glycosyl transferase family 4 SaO55_RS04090 PF01205 Uncharacterized protein family UPF0029 SaO55_RS04090 PF09186 Domain of unknown function (DUF1949) SaO55_RS04095 PF02645 Uncharacterised protein, DegV family COG1307 SaO55_RS04100 PF04851 Type III restriction enzyme, res subunit SaO55_RS04100 PF00271 Helicase conserved C-terminal domain SaO55_RS04110 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SaO55_RS04110 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SaO55_RS04115 PF07516 SecA Wing and Scaffold domain SaO55_RS04115 PF01043 SecA preprotein cross-linking domain SaO55_RS04115 PF02810 SEC-C motif SaO55_RS04115 PF07517 SecA DEAD-like domain SaO55_RS04135 PF01476 LysM domain SaO55_RS04135 PF05257 CHAP domain SaO55_RS04150 PF17757 UvrB interaction domain SaO55_RS04150 PF12344 Ultra-violet resistance protein B SaO55_RS04150 PF02151 UvrB/uvrC motif SaO55_RS04150 PF04851 Type III restriction enzyme, res subunit SaO55_RS04150 PF00271 Helicase conserved C-terminal domain SaO55_RS04155 PF17755 UvrA DNA-binding domain SaO55_RS04155 PF17760 UvrA interaction domain SaO55_RS04155 PF00005 ABC transporter SaO55_RS04160 PF02603 HPr Serine kinase N terminus SaO55_RS04160 PF07475 HPr Serine kinase C-terminal domain SaO55_RS04165 PF01790 Prolipoprotein diacylglyceryl transferase SaO55_RS04170 PF14602 Hexapeptide repeat of succinyl-transferase SaO55_RS04180 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS04185 PF03668 P-loop ATPase protein family SaO55_RS04190 PF01933 Uncharacterised protein family UPF0052 SaO55_RS04195 PF10298 WhiA N-terminal LAGLIDADG-like domain SaO55_RS04195 PF14527 WhiA LAGLIDADG-like domain SaO55_RS04195 PF02650 WhiA C-terminal HTH domain SaO55_RS04205 PF00574 Clp protease SaO55_RS04210 PF03949 Malic enzyme, NAD binding domain SaO55_RS04210 PF00390 Malic enzyme, N-terminal domain SaO55_RS04215 PF08338 Domain of unknown function (DUF1731) SaO55_RS04215 PF01370 NAD dependent epimerase/dehydratase family SaO55_RS04230 PF04198 Putative sugar-binding domain SaO55_RS04235 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SaO55_RS04235 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SaO55_RS04240 PF00162 Phosphoglycerate kinase SaO55_RS04245 PF00121 Triosephosphate isomerase SaO55_RS04250 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SaO55_RS04250 PF01676 Metalloenzyme superfamily SaO55_RS04255 PF03952 Enolase, N-terminal domain SaO55_RS04255 PF00113 Enolase, C-terminal TIM barrel domain SaO55_RS04265 PF03840 Preprotein translocase SecG subunit SaO55_RS04270 PF12146 Serine aminopeptidase, S33 SaO55_RS04275 PF08206 Ribonuclease B OB domain SaO55_RS04275 PF00575 S1 RNA binding domain SaO55_RS04275 PF17876 Cold shock domain SaO55_RS04275 PF00773 RNB domain SaO55_RS04280 PF01668 SmpB protein SaO55_RS04310 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SaO55_RS04310 PF04650 YSIRK type signal peptide SaO55_RS04310 PF17961 Bacterial Ig domain SaO55_RS04310 PF17961 Bacterial Ig domain SaO55_RS04310 PF00746 LPXTG cell wall anchor motif SaO55_RS04310 PF04650 YSIRK type signal peptide SaO55_RS04310 PF00746 LPXTG cell wall anchor motif SaO55_RS04310 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SaO55_RS04330 PF00565 Staphylococcal nuclease homologue SaO55_RS04335 PF00313 'Cold-shock' DNA-binding domain SaO55_RS04375 PF00300 Histidine phosphatase superfamily (branch 1) SaO55_RS04380 PF01810 LysE type translocator SaO55_RS04390 PF02566 OsmC-like protein SaO55_RS04395 PF01487 Type I 3-dehydroquinase SaO55_RS04405 PF00085 Thioredoxin SaO55_RS04410 PF03960 ArsC family SaO55_RS04415 PF01597 Glycine cleavage H-protein SaO55_RS04425 PF09234 Domain of unknown function (DUF1963) SaO55_RS04430 PF01751 Toprim domain SaO55_RS04440 PF09383 NIL domain SaO55_RS04440 PF00005 ABC transporter SaO55_RS04445 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS04450 PF03180 NLPA lipoprotein SaO55_RS04455 PF14659 Phage integrase, N-terminal SAM-like domain SaO55_RS04455 PF00589 Phage integrase family SaO55_RS04560 PF10668 Phage terminase small subunit SaO55_RS04560 PF03592 Terminase small subunit SaO55_RS04590 PF05532 CsbD-like SaO55_RS04600 PF00005 ABC transporter SaO55_RS04605 PF01458 Uncharacterized protein family (UPF0051) SaO55_RS04610 PF00266 Aminotransferase class-V SaO55_RS04615 PF01592 NifU-like N terminal domain SaO55_RS04620 PF01458 Uncharacterized protein family (UPF0051) SaO55_RS04635 PF01595 Cyclin M transmembrane N-terminal domain SaO55_RS04635 PF03471 Transporter associated domain SaO55_RS04635 PF00571 CBS domain SaO55_RS04640 PF03060 Nitronate monooxygenase SaO55_RS04645 PF01904 Protein of unknown function DUF72 SaO55_RS04650 PF01925 Sulfite exporter TauE/SafE SaO55_RS04660 PF04055 Radical SAM superfamily SaO55_RS04660 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SaO55_RS04665 PF06265 Protein of unknown function (DUF1027) SaO55_RS04675 PF01934 Protein of unknown function DUF86 SaO55_RS04680 PF13344 Haloacid dehalogenase-like hydrolase SaO55_RS04685 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SaO55_RS04685 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SaO55_RS04700 PF13193 AMP-binding enzyme C-terminal domain SaO55_RS04700 PF00501 AMP-binding enzyme SaO55_RS04705 PF03062 MBOAT, membrane-bound O-acyltransferase family SaO55_RS04710 PF00550 Phosphopantetheine attachment site SaO55_RS04715 PF04914 DltD protein SaO55_RS04720 PF01106 NifU-like domain SaO55_RS04725 PF07315 Protein of unknown function (DUF1462) SaO55_RS04730 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS04735 PF07293 Protein of unknown function (DUF1450) SaO55_RS04740 PF01521 Iron-sulphur cluster biosynthesis SaO55_RS04745 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS04750 PF00883 Cytosol aminopeptidase family, catalytic domain SaO55_RS04750 PF02789 Cytosol aminopeptidase family, N-terminal domain SaO55_RS04755 PF03553 Na+/H+ antiporter family SaO55_RS04755 PF13726 Na+-H+ antiporter family SaO55_RS04760 PF03061 Thioesterase superfamily SaO55_RS04770 PF03334 Na+/H+ antiporter subunit SaO55_RS04775 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SaO55_RS04780 PF01899 Na+/H+ ion antiporter subunit SaO55_RS04785 PF00361 Proton-conducting membrane transporter SaO55_RS04790 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SaO55_RS04795 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SaO55_RS04800 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SaO55_RS04800 PF13244 Domain of unknown function (DUF4040) SaO55_RS04800 PF00361 Proton-conducting membrane transporter SaO55_RS04810 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SaO55_RS04815 PF00575 S1 RNA binding domain SaO55_RS04820 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SaO55_RS04825 PF00202 Aminotransferase class-III SaO55_RS04830 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SaO55_RS04830 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SaO55_RS04840 PF03009 Glycerophosphoryl diester phosphodiesterase family SaO55_RS04845 PF00206 Lyase SaO55_RS04845 PF14698 Argininosuccinate lyase C-terminal SaO55_RS04850 PF00764 Arginosuccinate synthase SaO55_RS04855 PF00342 Phosphoglucose isomerase SaO55_RS04865 PF09335 SNARE associated Golgi protein SaO55_RS04870 PF10502 Signal peptidase, peptidase S26 SaO55_RS04875 PF10502 Signal peptidase, peptidase S26 SaO55_RS04880 PF12705 PD-(D/E)XK nuclease superfamily SaO55_RS04880 PF13361 UvrD-like helicase C-terminal domain SaO55_RS04885 PF13361 UvrD-like helicase C-terminal domain SaO55_RS04885 PF00580 UvrD/REP helicase N-terminal domain SaO55_RS04885 PF12705 PD-(D/E)XK nuclease superfamily SaO55_RS04890 PF01557 Fumarylacetoacetate (FAA) hydrolase family SaO55_RS04895 PF07457 Protein of unknown function (DUF1516) SaO55_RS04900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SaO55_RS04900 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS04910 PF01883 Iron-sulfur cluster assembly protein SaO55_RS04915 PF01757 Acyltransferase family SaO55_RS04920 PF10431 C-terminal, D2-small domain, of ClpB protein SaO55_RS04920 PF00004 ATPase family associated with various cellular activities (AAA) SaO55_RS04920 PF07724 AAA domain (Cdc48 subfamily) SaO55_RS04920 PF17871 AAA lid domain SaO55_RS04920 PF02861 Clp amino terminal domain, pathogenicity island component SaO55_RS04945 PF01161 Phosphatidylethanolamine-binding protein SaO55_RS04950 PF03642 MAP domain SaO55_RS04960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SaO55_RS04960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SaO55_RS04965 PF02801 Beta-ketoacyl synthase, C-terminal domain SaO55_RS04965 PF00109 Beta-ketoacyl synthase, N-terminal domain SaO55_RS04975 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS04980 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS04980 PF12911 N-terminal TM domain of oligopeptide transport permease C SaO55_RS04985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SaO55_RS04985 PF00005 ABC transporter SaO55_RS04990 PF00005 ABC transporter SaO55_RS04990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SaO55_RS04995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SaO55_RS05000 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SaO55_RS05005 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SaO55_RS05005 PF00005 ABC transporter SaO55_RS05010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SaO55_RS05010 PF00005 ABC transporter SaO55_RS05015 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS05020 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS05020 PF12911 N-terminal TM domain of oligopeptide transport permease C SaO55_RS05025 PF00579 tRNA synthetases class I (W and Y) SaO55_RS05030 PF03960 ArsC family SaO55_RS05035 PF05389 Negative regulator of genetic competence (MecA) SaO55_RS05045 PF08439 Oligopeptidase F SaO55_RS05045 PF01432 Peptidase family M3 SaO55_RS05055 PF01152 Bacterial-like globin SaO55_RS05070 PF04607 Region found in RelA / SpoT proteins SaO55_RS05075 PF01513 ATP-NAD kinase SaO55_RS05080 PF00849 RNA pseudouridylate synthase SaO55_RS05085 PF03448 MgtE intracellular N domain SaO55_RS05085 PF01769 Divalent cation transporter SaO55_RS05085 PF00571 CBS domain SaO55_RS05090 PF02080 TrkA-C domain SaO55_RS05090 PF02254 TrkA-N domain SaO55_RS05090 PF00999 Sodium/hydrogen exchanger family SaO55_RS05100 PF01594 AI-2E family transporter SaO55_RS05105 PF01235 Sodium:alanine symporter family SaO55_RS05120 PF07690 Major Facilitator Superfamily SaO55_RS05125 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase SaO55_RS05125 PF04101 Glycosyltransferase family 28 C-terminal domain SaO55_RS05130 PF01225 Mur ligase family, catalytic domain SaO55_RS05130 PF02875 Mur ligase family, glutamate ligase domain SaO55_RS05130 PF08245 Mur ligase middle domain SaO55_RS05140 PF03144 Elongation factor Tu domain 2 SaO55_RS05140 PF00009 Elongation factor Tu GTP binding domain SaO55_RS05140 PF16658 Class II release factor RF3, C-terminal domain SaO55_RS05145 PF03741 Integral membrane protein TerC family SaO55_RS05150 PF13180 PDZ domain SaO55_RS05155 PF02386 Cation transport protein SaO55_RS05160 PF02872 5'-nucleotidase, C-terminal domain SaO55_RS05160 PF00149 Calcineurin-like phosphoesterase SaO55_RS05175 PF06338 ComK protein SaO55_RS05185 PF10437 Bacterial lipoate protein ligase C-terminus SaO55_RS05185 PF03099 Biotin/lipoate A/B protein ligase family SaO55_RS05190 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) SaO55_RS05220 PF00005 ABC transporter SaO55_RS05220 PF12704 MacB-like periplasmic core domain SaO55_RS05220 PF02687 FtsX-like permease family SaO55_RS05230 PF00534 Glycosyl transferases group 1 SaO55_RS05240 PF01497 Periplasmic binding protein SaO55_RS05250 PF05154 TM2 domain SaO55_RS05260 PF01040 UbiA prenyltransferase family SaO55_RS05270 PF00425 chorismate binding enzyme SaO55_RS05275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SaO55_RS05275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SaO55_RS05275 PF16582 Middle domain of thiamine pyrophosphate SaO55_RS05280 PF00561 alpha/beta hydrolase fold SaO55_RS05285 PF00378 Enoyl-CoA hydratase/isomerase SaO55_RS05290 PF09023 Staphostatin B SaO55_RS05295 PF05543 Staphopain peptidase C47 SaO55_RS05295 PF14731 Staphopain proregion SaO55_RS05310 PF00155 Aminotransferase class I and II SaO55_RS05315 PF01757 Acyltransferase family SaO55_RS05330 PF01510 N-acetylmuramoyl-L-alanine amidase SaO55_RS05330 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SaO55_RS05330 PF13457 GW (Gly-Tryp) dipeptide domain SaO55_RS05335 PF13673 Acetyltransferase (GNAT) domain SaO55_RS05340 PF10804 Protein of unknown function (DUF2538) SaO55_RS05345 PF03816 Cell envelope-related transcriptional attenuator domain SaO55_RS05350 PF00144 Beta-lactamase SaO55_RS05355 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SaO55_RS05360 PF00510 Cytochrome c oxidase subunit III SaO55_RS05365 PF00115 Cytochrome C and Quinol oxidase polypeptide I SaO55_RS05370 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SaO55_RS05370 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SaO55_RS05385 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SaO55_RS05385 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SaO55_RS05390 PF00731 AIR carboxylase SaO55_RS05395 PF02222 ATP-grasp domain SaO55_RS05395 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SaO55_RS05395 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SaO55_RS05400 PF01259 SAICAR synthetase SaO55_RS05405 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SaO55_RS05415 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SaO55_RS05415 PF02769 AIR synthase related protein, C-terminal domain SaO55_RS05415 PF00586 AIR synthase related protein, N-terminal domain SaO55_RS05420 PF00156 Phosphoribosyl transferase domain SaO55_RS05420 PF13537 Glutamine amidotransferase domain SaO55_RS05425 PF00586 AIR synthase related protein, N-terminal domain SaO55_RS05425 PF02769 AIR synthase related protein, C-terminal domain SaO55_RS05430 PF00551 Formyl transferase SaO55_RS05435 PF02142 MGS-like domain SaO55_RS05435 PF01808 AICARFT/IMPCHase bienzyme SaO55_RS05440 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SaO55_RS05440 PF02844 Phosphoribosylglycinamide synthetase, N domain SaO55_RS05440 PF02843 Phosphoribosylglycinamide synthetase, C domain SaO55_RS05450 PF02361 Cobalt transport protein SaO55_RS05455 PF00005 ABC transporter SaO55_RS05460 PF09819 ABC-type cobalt transport system, permease component SaO55_RS05480 PF10672 S-adenosylmethionine-dependent methyltransferase SaO55_RS05480 PF17785 PUA-like domain SaO55_RS05490 PF00381 PTS HPr component phosphorylation site SaO55_RS05495 PF05524 PEP-utilising enzyme, N-terminal SaO55_RS05495 PF00391 PEP-utilising enzyme, mobile domain SaO55_RS05495 PF02896 PEP-utilising enzyme, TIM barrel domain SaO55_RS05500 PF00462 Glutaredoxin SaO55_RS05505 PF01654 Cytochrome bd terminal oxidase subunit I SaO55_RS05510 PF02322 Cytochrome bd terminal oxidase subunit II SaO55_RS05515 PF02080 TrkA-C domain SaO55_RS05515 PF02254 TrkA-N domain SaO55_RS05520 PF00753 Metallo-beta-lactamase superfamily SaO55_RS05520 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SaO55_RS05520 PF17770 Ribonuclease J C-terminal domain SaO55_RS05525 PF07288 Protein of unknown function (DUF1447) SaO55_RS05535 PF01327 Polypeptide deformylase SaO55_RS05545 PF00676 Dehydrogenase E1 component SaO55_RS05550 PF02779 Transketolase, pyrimidine binding domain SaO55_RS05550 PF02780 Transketolase, C-terminal domain SaO55_RS05555 PF00364 Biotin-requiring enzyme SaO55_RS05555 PF02817 e3 binding domain SaO55_RS05555 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SaO55_RS05560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SaO55_RS05560 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS05565 PF05256 Uncharacterised protein family (UPF0223) SaO55_RS05575 PF00005 ABC transporter SaO55_RS05575 PF08402 TOBE domain SaO55_RS05580 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS05585 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS05590 PF13416 Bacterial extracellular solute-binding protein SaO55_RS05605 PF01566 Natural resistance-associated macrophage protein SaO55_RS05610 PF06335 Protein of unknown function (DUF1054) SaO55_RS05615 PF00459 Inositol monophosphatase family SaO55_RS05625 PF00009 Elongation factor Tu GTP binding domain SaO55_RS05625 PF03144 Elongation factor Tu domain 2 SaO55_RS05625 PF14492 Elongation Factor G, domain II SaO55_RS05625 PF00679 Elongation factor G C-terminus SaO55_RS05640 PF07408 Protein of unknown function (DUF1507) SaO55_RS05645 PF01098 Cell cycle protein SaO55_RS05650 PF02436 Conserved carboxylase domain SaO55_RS05650 PF02785 Biotin carboxylase C-terminal domain SaO55_RS05650 PF00364 Biotin-requiring enzyme SaO55_RS05650 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SaO55_RS05650 PF00682 HMGL-like SaO55_RS05650 PF00289 Biotin carboxylase, N-terminal domain SaO55_RS05655 PF02628 Cytochrome oxidase assembly protein SaO55_RS05660 PF01040 UbiA prenyltransferase family SaO55_RS05680 PF06133 Control of competence regulator ComK, YlbF/YmcA SaO55_RS05685 PF03009 Glycerophosphoryl diester phosphodiesterase family SaO55_RS05690 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SaO55_RS05705 PF01467 Cytidylyltransferase-like SaO55_RS05710 PF05636 HIGH Nucleotidyl Transferase SaO55_RS05725 PF01783 Ribosomal L32p protein family SaO55_RS05730 PF05031 Iron Transport-associated domain SaO55_RS05730 PF00746 LPXTG cell wall anchor motif SaO55_RS05730 PF04650 YSIRK type signal peptide SaO55_RS05735 PF05031 Iron Transport-associated domain SaO55_RS05735 PF00746 LPXTG cell wall anchor motif SaO55_RS05740 PF05031 Iron Transport-associated domain SaO55_RS05750 PF01497 Periplasmic binding protein SaO55_RS05755 PF01032 FecCD transport family SaO55_RS05760 PF04203 Sortase domain SaO55_RS05765 PF03992 Antibiotic biosynthesis monooxygenase SaO55_RS05775 PF00588 SpoU rRNA Methylase family SaO55_RS05775 PF08032 RNA 2'-O ribose methyltransferase substrate binding SaO55_RS05780 PF01409 tRNA synthetases class II core domain (F) SaO55_RS05780 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SaO55_RS05785 PF03483 B3/4 domain SaO55_RS05785 PF03484 tRNA synthetase B5 domain SaO55_RS05785 PF03147 Ferredoxin-fold anticodon binding domain SaO55_RS05785 PF01588 Putative tRNA binding domain SaO55_RS05785 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SaO55_RS05805 PF11858 Domain of unknown function (DUF3378) SaO55_RS05805 PF01351 Ribonuclease HII SaO55_RS05810 PF05164 Cell division protein ZapA SaO55_RS05820 PF02811 PHP domain SaO55_RS05820 PF14716 Helix-hairpin-helix domain SaO55_RS05820 PF14791 DNA polymerase beta thumb SaO55_RS05825 PF00488 MutS domain V SaO55_RS05825 PF01713 Smr domain SaO55_RS05830 PF00085 Thioredoxin SaO55_RS05840 PF02151 UvrB/uvrC motif SaO55_RS05840 PF08459 UvrC Helix-hairpin-helix N-terminal SaO55_RS05840 PF01541 GIY-YIG catalytic domain SaO55_RS05845 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SaO55_RS05850 PF02910 Fumarate reductase flavoprotein C-term SaO55_RS05850 PF00890 FAD binding domain SaO55_RS05855 PF13085 2Fe-2S iron-sulfur cluster binding domain SaO55_RS05855 PF13183 4Fe-4S dicluster domain SaO55_RS05860 PF01177 Asp/Glu/Hydantoin racemase SaO55_RS05865 PF01725 Ham1 family SaO55_RS05870 PF12850 Calcineurin-like phosphoesterase superfamily domain SaO55_RS05885 PF16104 Formyl peptide receptor-like 1 inhibitory protein SaO55_RS05895 PF12199 Extracellular fibrinogen binding protein C terminal SaO55_RS05920 PF07968 Leukocidin/Hemolysin toxin family SaO55_RS05945 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS05950 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS05955 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS05960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SaO55_RS05960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SaO55_RS05965 PF00696 Amino acid kinase family SaO55_RS05970 PF03606 C4-dicarboxylate anaerobic carrier SaO55_RS05995 PF05480 Staphylococcus haemolytic protein SaO55_RS06000 PF05480 Staphylococcus haemolytic protein SaO55_RS06005 PF13419 Haloacid dehalogenase-like hydrolase SaO55_RS06015 PF10079 Bacillithiol biosynthesis BshC SaO55_RS06020 PF02381 MraZ protein, putative antitoxin-like SaO55_RS06025 PF01795 MraW methylase family SaO55_RS06030 PF04977 Septum formation initiator SaO55_RS06035 PF00905 Penicillin binding protein transpeptidase domain SaO55_RS06035 PF03717 Penicillin-binding Protein dimerisation domain SaO55_RS06035 PF03793 PASTA domain SaO55_RS06040 PF00953 Glycosyl transferase family 4 SaO55_RS06045 PF08245 Mur ligase middle domain SaO55_RS06045 PF02875 Mur ligase family, glutamate ligase domain SaO55_RS06050 PF08478 POTRA domain, FtsQ-type SaO55_RS06050 PF03799 Cell division protein FtsQ SaO55_RS06055 PF02491 SHS2 domain inserted in FTSA SaO55_RS06060 PF12327 FtsZ family, C-terminal domain SaO55_RS06060 PF00091 Tubulin/FtsZ family, GTPase domain SaO55_RS06065 PF02578 Multi-copper polyphenol oxidoreductase laccase SaO55_RS06070 PF01168 Alanine racemase, N-terminal domain SaO55_RS06075 PF04472 Cell division protein SepF SaO55_RS06080 PF02325 YGGT family SaO55_RS06085 PF01479 S4 domain SaO55_RS06085 PF17774 Putative RNA-binding domain in YlmH SaO55_RS06090 PF05103 DivIVA protein SaO55_RS06095 PF00133 tRNA synthetases class I (I, L, M and V) SaO55_RS06095 PF08264 Anticodon-binding domain of tRNA SaO55_RS06095 PF06827 Zinc finger found in FPG and IleRS SaO55_RS06100 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SaO55_RS06110 PF01252 Signal peptidase (SPase) II SaO55_RS06115 PF01479 S4 domain SaO55_RS06115 PF00849 RNA pseudouridylate synthase SaO55_RS06120 PF00156 Phosphoribosyl transferase domain SaO55_RS06125 PF00860 Permease family SaO55_RS06130 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SaO55_RS06130 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SaO55_RS06135 PF01979 Amidohydrolase family SaO55_RS06140 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SaO55_RS06140 PF00117 Glutamine amidotransferase class-I SaO55_RS06145 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SaO55_RS06145 PF02142 MGS-like domain SaO55_RS06145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SaO55_RS06150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SaO55_RS06155 PF00156 Phosphoribosyl transferase domain SaO55_RS06170 PF05670 NFACT protein RNA binding domain SaO55_RS06175 PF00625 Guanylate kinase SaO55_RS06180 PF01192 RNA polymerase Rpb6 SaO55_RS06185 PF02441 Flavoprotein SaO55_RS06185 PF04127 DNA / pantothenate metabolism flavoprotein SaO55_RS06190 PF18074 Primosomal protein N C-terminal domain SaO55_RS06190 PF04851 Type III restriction enzyme, res subunit SaO55_RS06190 PF17764 3′ DNA-binding domain (3′BD) SaO55_RS06190 PF00271 Helicase conserved C-terminal domain SaO55_RS06190 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SaO55_RS06200 PF05154 TM2 domain SaO55_RS06205 PF01327 Polypeptide deformylase SaO55_RS06210 PF00551 Formyl transferase SaO55_RS06210 PF02911 Formyl transferase, C-terminal domain SaO55_RS06215 PF01029 NusB family SaO55_RS06215 PF01189 16S rRNA methyltransferase RsmB/F SaO55_RS06220 PF04055 Radical SAM superfamily SaO55_RS06230 PF00069 Protein kinase domain SaO55_RS06230 PF03793 PASTA domain SaO55_RS06235 PF16745 RsgA N-terminal domain SaO55_RS06235 PF03193 RsgA GTPase SaO55_RS06240 PF00834 Ribulose-phosphate 3 epimerase family SaO55_RS06250 PF00830 Ribosomal L28 family SaO55_RS06255 PF03780 Asp23 family, cell envelope-related function SaO55_RS06260 PF13684 Dihydroxyacetone kinase family SaO55_RS06260 PF02734 DAK2 domain SaO55_RS06265 PF00271 Helicase conserved C-terminal domain SaO55_RS06265 PF00270 DEAD/DEAH box helicase SaO55_RS06265 PF17191 RecG wedge domain SaO55_RS06270 PF03061 Thioesterase superfamily SaO55_RS06275 PF02504 Fatty acid synthesis protein SaO55_RS06280 PF00698 Acyl transferase domain SaO55_RS06295 PF00550 Phosphopantetheine attachment site SaO55_RS06300 PF14622 Ribonuclease-III-like SaO55_RS06300 PF00035 Double-stranded RNA binding motif SaO55_RS06305 PF02463 RecF/RecN/SMC N terminal domain SaO55_RS06305 PF06470 SMC proteins Flexible Hinge Domain SaO55_RS06310 PF00448 SRP54-type protein, GTPase domain SaO55_RS06310 PF02881 SRP54-type protein, helical bundle domain SaO55_RS06315 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SaO55_RS06320 PF00448 SRP54-type protein, GTPase domain SaO55_RS06320 PF02881 SRP54-type protein, helical bundle domain SaO55_RS06320 PF02978 Signal peptide binding domain SaO55_RS06325 PF00886 Ribosomal protein S16 SaO55_RS06330 PF01782 RimM N-terminal domain SaO55_RS06330 PF05239 PRC-barrel domain SaO55_RS06335 PF01746 tRNA (Guanine-1)-methyltransferase SaO55_RS06340 PF01245 Ribosomal protein L19 SaO55_RS06355 PF01926 50S ribosome-binding GTPase SaO55_RS06360 PF01351 Ribonuclease HII SaO55_RS06365 PF00549 CoA-ligase SaO55_RS06365 PF08442 ATP-grasp domain SaO55_RS06370 PF00549 CoA-ligase SaO55_RS06370 PF02629 CoA binding domain SaO55_RS06375 PF05257 CHAP domain SaO55_RS06375 PF05257 CHAP domain SaO55_RS06375 PF01476 LysM domain SaO55_RS06375 PF01476 LysM domain SaO55_RS06380 PF02388 FemAB family SaO55_RS06385 PF02481 DNA recombination-mediator protein A SaO55_RS06390 PF01751 Toprim domain SaO55_RS06390 PF01131 DNA topoisomerase SaO55_RS06390 PF01396 Topoisomerase DNA binding C4 zinc finger SaO55_RS06395 PF01134 Glucose inhibited division protein A SaO55_RS06400 PF00589 Phage integrase family SaO55_RS06400 PF02899 Phage integrase, N-terminal SAM-like domain SaO55_RS06405 PF00227 Proteasome subunit SaO55_RS06410 PF07724 AAA domain (Cdc48 subfamily) SaO55_RS06410 PF10431 C-terminal, D2-small domain, of ClpB protein SaO55_RS06410 PF00004 ATPase family associated with various cellular activities (AAA) SaO55_RS06415 PF08222 CodY helix-turn-helix domain SaO55_RS06415 PF06018 CodY GAF-like domain SaO55_RS06425 PF00318 Ribosomal protein S2 SaO55_RS06435 PF00889 Elongation factor TS SaO55_RS06440 PF00696 Amino acid kinase family SaO55_RS06445 PF01765 Ribosome recycling factor SaO55_RS06450 PF01255 Putative undecaprenyl diphosphate synthase SaO55_RS06460 PF13180 PDZ domain SaO55_RS06460 PF02163 Peptidase family M50 SaO55_RS06465 PF04073 Aminoacyl-tRNA editing domain SaO55_RS06465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SaO55_RS06465 PF03129 Anticodon binding domain SaO55_RS06470 PF07733 Bacterial DNA polymerase III alpha NTPase domain SaO55_RS06470 PF14579 Helix-hairpin-helix motif SaO55_RS06470 PF02811 PHP domain SaO55_RS06470 PF00929 Exonuclease SaO55_RS06470 PF11490 DNA polymerase III polC-type N-terminus II SaO55_RS06470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SaO55_RS06470 PF14480 DNA polymerase III polC-type N-terminus I SaO55_RS06480 PF02576 RimP N-terminal domain SaO55_RS06480 PF17384 RimP C-terminal SH3 domain SaO55_RS06485 PF13184 NusA-like KH domain SaO55_RS06485 PF00575 S1 RNA binding domain SaO55_RS06485 PF08529 NusA N-terminal domain SaO55_RS06490 PF04296 Protein of unknown function (DUF448) SaO55_RS06495 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SaO55_RS06500 PF04760 Translation initiation factor IF-2, N-terminal region SaO55_RS06500 PF11987 Translation-initiation factor 2 SaO55_RS06500 PF00009 Elongation factor Tu GTP binding domain SaO55_RS06505 PF02033 Ribosome-binding factor A SaO55_RS06510 PF01509 TruB family pseudouridylate synthase (N terminal domain) SaO55_RS06510 PF16198 tRNA pseudouridylate synthase B C-terminal domain SaO55_RS06515 PF06574 FAD synthetase SaO55_RS06515 PF01687 Riboflavin kinase SaO55_RS06520 PF00312 Ribosomal protein S15 SaO55_RS06525 PF00575 S1 RNA binding domain SaO55_RS06525 PF03725 3' exoribonuclease family, domain 2 SaO55_RS06525 PF01138 3' exoribonuclease family, domain 1 SaO55_RS06525 PF00013 KH domain SaO55_RS06525 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SaO55_RS06535 PF00753 Metallo-beta-lactamase superfamily SaO55_RS06535 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SaO55_RS06535 PF17770 Ribonuclease J C-terminal domain SaO55_RS06540 PF17854 FtsK alpha domain SaO55_RS06540 PF01580 FtsK/SpoIIIE family SaO55_RS06540 PF09397 Ftsk gamma domain SaO55_RS06545 PF07702 UTRA domain SaO55_RS06545 PF00392 Bacterial regulatory proteins, gntR family SaO55_RS06550 PF05193 Peptidase M16 inactive domain SaO55_RS06555 PF00675 Insulinase (Peptidase family M16) SaO55_RS06555 PF05193 Peptidase M16 inactive domain SaO55_RS06565 PF11868 Protein of unknown function (DUF3388) SaO55_RS06575 PF01066 CDP-alcohol phosphatidyltransferase SaO55_RS06580 PF00994 Probable molybdopterin binding domain SaO55_RS06580 PF18146 Damage-inducible protein CinA KH domain SaO55_RS06580 PF02464 Competence-damaged protein SaO55_RS06585 PF00154 recA bacterial DNA recombination protein SaO55_RS06590 PF00013 KH domain SaO55_RS06590 PF01966 HD domain SaO55_RS06590 PF12072 Domain of unknown function (DUF3552) SaO55_RS06600 PF13277 YmdB-like protein SaO55_RS06605 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SaO55_RS06605 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SaO55_RS06605 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SaO55_RS06610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SaO55_RS06615 PF01910 Thiamine-binding protein SaO55_RS06620 PF00919 Uncharacterized protein family UPF0004 SaO55_RS06620 PF04055 Radical SAM superfamily SaO55_RS06620 PF01938 TRAM domain SaO55_RS06635 PF05190 MutS family domain IV SaO55_RS06635 PF05192 MutS domain III SaO55_RS06635 PF05188 MutS domain II SaO55_RS06635 PF01624 MutS domain I SaO55_RS06635 PF00488 MutS domain V SaO55_RS06640 PF08676 MutL C terminal dimerisation domain SaO55_RS06640 PF01119 DNA mismatch repair protein, C-terminal domain SaO55_RS06645 PF04309 Glycerol-3-phosphate responsive antiterminator SaO55_RS06650 PF00230 Major intrinsic protein SaO55_RS06655 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SaO55_RS06655 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SaO55_RS06660 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SaO55_RS06660 PF01266 FAD dependent oxidoreductase SaO55_RS06710 PF03374 Phage antirepressor protein KilAC domain SaO55_RS06710 PF09669 Phage regulatory protein Rha (Phage_pRha) SaO55_RS06755 PF00436 Single-strand binding protein family SaO55_RS06775 PF00772 DnaB-like helicase N terminal domain SaO55_RS06775 PF03796 DnaB-like helicase C terminal domain SaO55_RS06835 PF00692 dUTPase SaO55_RS06880 PF04466 Phage terminase large subunit SaO55_RS06880 PF17288 Terminase RNAseH like domain SaO55_RS06980 PF08460 Bacterial SH3 domain SaO55_RS06980 PF05257 CHAP domain SaO55_RS06980 PF01510 N-acetylmuramoyl-L-alanine amidase SaO55_RS07005 PF17209 Hfq protein SaO55_RS07010 PF00255 Glutathione peroxidase SaO55_RS07015 PF01926 50S ribosome-binding GTPase SaO55_RS07015 PF16360 GTP-binding GTPase Middle Region SaO55_RS07015 PF13167 GTP-binding GTPase N-terminal SaO55_RS07020 PF06838 Methionine gamma-lyase SaO55_RS07025 PF13411 MerR HTH family regulatory protein SaO55_RS07030 PF00120 Glutamine synthetase, catalytic domain SaO55_RS07030 PF03951 Glutamine synthetase, beta-Grasp domain SaO55_RS07100 PF13091 PLD-like domain SaO55_RS07100 PF13396 Phospholipase_D-nuclease N-terminal SaO55_RS07115 PF00565 Staphylococcal nuclease homologue SaO55_RS07130 PF13840 ACT domain SaO55_RS07130 PF00696 Amino acid kinase family SaO55_RS07135 PF03447 Homoserine dehydrogenase, NAD binding domain SaO55_RS07135 PF00742 Homoserine dehydrogenase SaO55_RS07135 PF01842 ACT domain SaO55_RS07140 PF00291 Pyridoxal-phosphate dependent enzyme SaO55_RS07145 PF00288 GHMP kinases N terminal domain SaO55_RS07145 PF08544 GHMP kinases C terminal SaO55_RS07165 PF00324 Amino acid permease SaO55_RS07170 PF00199 Catalase SaO55_RS07170 PF06628 Catalase-related immune-responsive SaO55_RS07175 PF00471 Ribosomal protein L33 SaO55_RS07180 PF00253 Ribosomal protein S14p/S29e SaO55_RS07185 PF00478 IMP dehydrogenase / GMP reductase domain SaO55_RS07195 PF00188 Cysteine-rich secretory protein family SaO55_RS07200 PF01726 LexA DNA binding domain SaO55_RS07200 PF00717 Peptidase S24-like SaO55_RS07210 PF05979 Bacterial protein of unknown function (DUF896) SaO55_RS07215 PF00456 Transketolase, thiamine diphosphate binding domain SaO55_RS07215 PF02779 Transketolase, pyrimidine binding domain SaO55_RS07215 PF02780 Transketolase, C-terminal domain SaO55_RS07220 PF03672 Uncharacterised protein family (UPF0154) SaO55_RS07230 PF07301 Protein of unknown function (DUF1453) SaO55_RS07235 PF12320 Type 5 capsule protein repressor C-terminal domain SaO55_RS07235 PF00149 Calcineurin-like phosphoesterase SaO55_RS07240 PF13476 AAA domain SaO55_RS07245 PF01741 Large-conductance mechanosensitive channel, MscL SaO55_RS07250 PF02028 BCCT, betaine/carnitine/choline family transporter SaO55_RS07255 PF00330 Aconitase family (aconitate hydratase) SaO55_RS07255 PF00694 Aconitase C-terminal domain SaO55_RS07260 PF03061 Thioesterase superfamily SaO55_RS07280 PF02660 Glycerol-3-phosphate acyltransferase SaO55_RS07285 PF00204 DNA gyrase B SaO55_RS07285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS07285 PF01751 Toprim domain SaO55_RS07285 PF00986 DNA gyrase B subunit, carboxyl terminus SaO55_RS07290 PF00521 DNA gyrase/topoisomerase IV, subunit A SaO55_RS07290 PF03989 DNA gyrase C-terminal domain, beta-propeller SaO55_RS07300 PF01235 Sodium:alanine symporter family SaO55_RS07305 PF03123 CAT RNA binding domain SaO55_RS07305 PF00874 PRD domain SaO55_RS07315 PF01594 AI-2E family transporter SaO55_RS07320 PF03706 Lysylphosphatidylglycerol synthase TM region SaO55_RS07320 PF09924 Uncharacterised conserved protein (DUF2156) SaO55_RS07325 PF01625 Peptide methionine sulfoxide reductase SaO55_RS07330 PF03816 Cell envelope-related transcriptional attenuator domain SaO55_RS07335 PF01361 Tautomerase enzyme SaO55_RS07340 PF11798 IMS family HHH motif SaO55_RS07340 PF00817 impB/mucB/samB family SaO55_RS07340 PF11799 impB/mucB/samB family C-terminal domain SaO55_RS07345 PF02153 Prephenate dehydrogenase SaO55_RS07350 PF05343 M42 glutamyl aminopeptidase SaO55_RS07355 PF00425 chorismate binding enzyme SaO55_RS07355 PF04715 Anthranilate synthase component I, N terminal region SaO55_RS07360 PF00117 Glutamine amidotransferase class-I SaO55_RS07365 PF00591 Glycosyl transferase family, a/b domain SaO55_RS07370 PF00218 Indole-3-glycerol phosphate synthase SaO55_RS07375 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SaO55_RS07380 PF00291 Pyridoxal-phosphate dependent enzyme SaO55_RS07385 PF00290 Tryptophan synthase alpha chain SaO55_RS07390 PF02388 FemAB family SaO55_RS07395 PF02388 FemAB family SaO55_RS07420 PF00899 ThiF family SaO55_RS07450 PF00005 ABC transporter SaO55_RS07455 PF00005 ABC transporter SaO55_RS07460 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS07465 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS07480 PF01432 Peptidase family M3 SaO55_RS07480 PF08439 Oligopeptidase F SaO55_RS07485 PF01895 PhoU domain SaO55_RS07490 PF00005 ABC transporter SaO55_RS07495 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS07500 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS07505 PF12849 PBP superfamily domain SaO55_RS07510 PF17783 CvfB-like winged helix domain SaO55_RS07510 PF13509 S1 domain SaO55_RS07515 PF12848 ABC transporter SaO55_RS07515 PF00005 ABC transporter SaO55_RS07525 PF13840 ACT domain SaO55_RS07525 PF01842 ACT domain SaO55_RS07525 PF00696 Amino acid kinase family SaO55_RS07530 PF02774 Semialdehyde dehydrogenase, dimerisation domain SaO55_RS07530 PF01118 Semialdehyde dehydrogenase, NAD binding domain SaO55_RS07535 PF00701 Dihydrodipicolinate synthetase family SaO55_RS07540 PF01113 Dihydrodipicolinate reductase, N-terminus SaO55_RS07540 PF05173 Dihydrodipicolinate reductase, C-terminus SaO55_RS07545 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SaO55_RS07545 PF00132 Bacterial transferase hexapeptide (six repeats) SaO55_RS07545 PF14602 Hexapeptide repeat of succinyl-transferase SaO55_RS07550 PF01546 Peptidase family M20/M25/M40 SaO55_RS07550 PF07687 Peptidase dimerisation domain SaO55_RS07555 PF00842 Alanine racemase, C-terminal domain SaO55_RS07555 PF01168 Alanine racemase, N-terminal domain SaO55_RS07560 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SaO55_RS07560 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SaO55_RS07565 PF04299 Putative FMN-binding domain SaO55_RS07575 PF00313 'Cold-shock' DNA-binding domain SaO55_RS07590 PF00708 Acylphosphatase SaO55_RS07600 PF05816 Toxic anion resistance protein (TelA) SaO55_RS07605 PF05525 Branched-chain amino acid transport protein SaO55_RS07610 PF00092 von Willebrand factor type A domain SaO55_RS07615 PF07728 AAA domain (dynein-related subfamily) SaO55_RS07615 PF08406 CbbQ/NirQ/NorQ C-terminal SaO55_RS07630 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SaO55_RS07630 PF00364 Biotin-requiring enzyme SaO55_RS07630 PF02817 e3 binding domain SaO55_RS07635 PF00676 Dehydrogenase E1 component SaO55_RS07635 PF16870 2-oxoglutarate dehydrogenase C-terminal SaO55_RS07635 PF02779 Transketolase, pyrimidine binding domain SaO55_RS07640 PF00512 His Kinase A (phospho-acceptor) domain SaO55_RS07640 PF18719 ArlS sensor domain SaO55_RS07640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS07645 PF00072 Response regulator receiver domain SaO55_RS07645 PF00486 Transcriptional regulatory protein, C terminal SaO55_RS07655 PF01569 PAP2 superfamily SaO55_RS07660 PF03033 Glycosyltransferase family 28 N-terminal domain SaO55_RS07660 PF04101 Glycosyltransferase family 28 C-terminal domain SaO55_RS07670 PF03572 Peptidase family S41 SaO55_RS07670 PF13180 PDZ domain SaO55_RS07670 PF01471 Putative peptidoglycan binding domain SaO55_RS07675 PF06855 YozE SAM-like fold SaO55_RS07680 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SaO55_RS07685 PF01641 SelR domain SaO55_RS07690 PF01625 Peptide methionine sulfoxide reductase SaO55_RS07695 PF02645 Uncharacterised protein, DegV family COG1307 SaO55_RS07700 PF00186 Dihydrofolate reductase SaO55_RS07705 PF00303 Thymidylate synthase SaO55_RS07710 PF06491 Disulphide isomerase SaO55_RS07715 PF13769 Virulence factor SaO55_RS07715 PF08712 Scaffold protein Nfu/NifU N terminal SaO55_RS07720 PF08712 Scaffold protein Nfu/NifU N terminal SaO55_RS07720 PF13769 Virulence factor SaO55_RS07725 PF10782 Zinc-finger SaO55_RS07730 PF02592 Putative vitamin uptake transporter SaO55_RS07740 PF07564 Domain of Unknown Function (DUF1542) SaO55_RS07740 PF04650 YSIRK type signal peptide SaO55_RS07740 PF01468 GA module SaO55_RS07745 PF07690 Major Facilitator Superfamily SaO55_RS07750 PF13520 Amino acid permease SaO55_RS07755 PF00291 Pyridoxal-phosphate dependent enzyme SaO55_RS07760 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SaO55_RS07760 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SaO55_RS07765 PF01367 5'-3' exonuclease, C-terminal SAM fold SaO55_RS07765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SaO55_RS07770 PF00350 Dynamin family SaO55_RS07785 PF01170 Putative RNA methylase family UPF0020 SaO55_RS07785 PF02926 THUMP domain SaO55_RS07795 PF05103 DivIVA protein SaO55_RS07800 PF06908 YspA SLOG family SaO55_RS07820 PF03838 Recombination protein U SaO55_RS07825 PF00905 Penicillin binding protein transpeptidase domain SaO55_RS07825 PF00912 Transglycosylase SaO55_RS07835 PF00633 Helix-hairpin-helix motif SaO55_RS07835 PF00730 HhH-GPD superfamily base excision DNA repair protein SaO55_RS07835 PF10576 Iron-sulfur binding domain of endonuclease III SaO55_RS07840 PF07261 Replication initiation and membrane attachment SaO55_RS07845 PF00152 tRNA synthetases class II (D, K and N) SaO55_RS07845 PF01336 OB-fold nucleic acid binding domain SaO55_RS07850 PF00929 Exonuclease SaO55_RS07850 PF13307 Helicase C-terminal domain SaO55_RS07855 PF03099 Biotin/lipoate A/B protein ligase family SaO55_RS07855 PF08279 HTH domain SaO55_RS07855 PF02237 Biotin protein ligase C terminal domain SaO55_RS07860 PF01743 Poly A polymerase head domain SaO55_RS07860 PF13735 tRNA nucleotidyltransferase domain 2 putative SaO55_RS07860 PF12627 Probable RNA and SrmB- binding site of polymerase A SaO55_RS07865 PF00534 Glycosyl transferases group 1 SaO55_RS07865 PF13439 Glycosyltransferase Family 4 SaO55_RS07870 PF03819 MazG nucleotide pyrophosphohydrolase domain SaO55_RS07875 PF04298 Putative neutral zinc metallopeptidase SaO55_RS07880 PF07187 Protein of unknown function (DUF1405) SaO55_RS07885 PF08864 UPF0302 domain SaO55_RS07885 PF08858 IDEAL domain SaO55_RS07895 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SaO55_RS07900 PF01761 3-dehydroquinate synthase SaO55_RS07905 PF01264 Chorismate synthase SaO55_RS07910 PF00334 Nucleoside diphosphate kinase SaO55_RS07915 PF00348 Polyprenyl synthetase SaO55_RS07920 PF01209 ubiE/COQ5 methyltransferase family SaO55_RS07935 PF00216 Bacterial DNA-binding protein SaO55_RS07940 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SaO55_RS07940 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SaO55_RS07945 PF01926 50S ribosome-binding GTPase SaO55_RS07945 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SaO55_RS07950 PF00575 S1 RNA binding domain SaO55_RS07970 PF02224 Cytidylate kinase SaO55_RS07975 PF17763 Glutaminase/Asparaginase C-terminal domain SaO55_RS07975 PF00710 Asparaginase, N-terminal SaO55_RS07990 PF01476 LysM domain SaO55_RS07995 PF00270 DEAD/DEAH box helicase SaO55_RS07995 PF00271 Helicase conserved C-terminal domain SaO55_RS08010 PF12822 ECF transporter, substrate-specific component SaO55_RS08035 PF00672 HAMP domain SaO55_RS08035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS08035 PF18698 Histidine kinase sensor domain SaO55_RS08035 PF00512 His Kinase A (phospho-acceptor) domain SaO55_RS08040 PF00072 Response regulator receiver domain SaO55_RS08040 PF00486 Transcriptional regulatory protein, C terminal SaO55_RS08045 PF01479 S4 domain SaO55_RS08045 PF00849 RNA pseudouridylate synthase SaO55_RS08050 PF04079 Segregation and condensation complex subunit ScpB SaO55_RS08055 PF02616 Segregation and condensation protein ScpA SaO55_RS08065 PF00589 Phage integrase family SaO55_RS08065 PF02899 Phage integrase, N-terminal SAM-like domain SaO55_RS08070 PF01475 Ferric uptake regulator family SaO55_RS08075 PF00293 NUDIX domain SaO55_RS08080 PF00248 Aldo/keto reductase family SaO55_RS08090 PF00106 short chain dehydrogenase SaO55_RS08095 PF03807 NADP oxidoreductase coenzyme F420-dependent SaO55_RS08095 PF14748 Pyrroline-5-carboxylate reductase dimerisation SaO55_RS08100 PF12706 Beta-lactamase superfamily domain SaO55_RS08105 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SaO55_RS08105 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SaO55_RS08115 PF16657 Maltogenic Amylase, C-terminal domain SaO55_RS08115 PF00128 Alpha amylase, catalytic domain SaO55_RS08120 PF00356 Bacterial regulatory proteins, lacI family SaO55_RS08135 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SaO55_RS08135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SaO55_RS08140 PF07687 Peptidase dimerisation domain SaO55_RS08140 PF01546 Peptidase family M20/M25/M40 SaO55_RS08150 PF06081 Aromatic acid exporter family member 1 SaO55_RS08150 PF11728 Putative aromatic acid exporter C-terminal domain SaO55_RS08155 PF06491 Disulphide isomerase SaO55_RS08160 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SaO55_RS08160 PF02817 e3 binding domain SaO55_RS08160 PF00364 Biotin-requiring enzyme SaO55_RS08165 PF02779 Transketolase, pyrimidine binding domain SaO55_RS08165 PF02780 Transketolase, C-terminal domain SaO55_RS08170 PF00676 Dehydrogenase E1 component SaO55_RS08175 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS08175 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SaO55_RS08180 PF13476 AAA domain SaO55_RS08185 PF01316 Arginine repressor, DNA binding domain SaO55_RS08185 PF02863 Arginine repressor, C-terminal domain SaO55_RS08190 PF00348 Polyprenyl synthetase SaO55_RS08195 PF02609 Exonuclease VII small subunit SaO55_RS08200 PF13742 OB-fold nucleic acid binding domain SaO55_RS08200 PF02601 Exonuclease VII, large subunit SaO55_RS08205 PF01029 NusB family SaO55_RS08210 PF03780 Asp23 family, cell envelope-related function SaO55_RS08215 PF00289 Biotin carboxylase, N-terminal domain SaO55_RS08215 PF02785 Biotin carboxylase C-terminal domain SaO55_RS08215 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SaO55_RS08220 PF00364 Biotin-requiring enzyme SaO55_RS08225 PF09285 Elongation factor P, C-terminal SaO55_RS08225 PF01132 Elongation factor P (EF-P) OB domain SaO55_RS08225 PF08207 Elongation factor P (EF-P) KOW-like domain SaO55_RS08230 PF01321 Creatinase/Prolidase N-terminal domain SaO55_RS08230 PF00557 Metallopeptidase family M24 SaO55_RS08245 PF03099 Biotin/lipoate A/B protein ligase family SaO55_RS08250 PF00581 Rhodanese-like domain SaO55_RS08255 PF00266 Aminotransferase class-V SaO55_RS08260 PF02347 Glycine cleavage system P-protein SaO55_RS08265 PF01571 Aminomethyltransferase folate-binding domain SaO55_RS08265 PF08669 Glycine cleavage T-protein C-terminal barrel domain SaO55_RS08270 PF01202 Shikimate kinase SaO55_RS08295 PF07963 Prokaryotic N-terminal methylation motif SaO55_RS08300 PF00482 Type II secretion system (T2SS), protein F SaO55_RS08305 PF00437 Type II/IV secretion system protein SaO55_RS08310 PF00753 Metallo-beta-lactamase superfamily SaO55_RS08315 PF01910 Thiamine-binding protein SaO55_RS08320 PF00480 ROK family SaO55_RS08325 PF06014 Bacterial protein of unknown function (DUF910) SaO55_RS08335 PF01812 5-formyltetrahydrofolate cyclo-ligase family SaO55_RS08340 PF00471 Ribosomal protein L33 SaO55_RS08345 PF03717 Penicillin-binding Protein dimerisation domain SaO55_RS08345 PF00905 Penicillin binding protein transpeptidase domain SaO55_RS08350 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SaO55_RS08350 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SaO55_RS08355 PF01475 Ferric uptake regulator family SaO55_RS08360 PF00950 ABC 3 transport family SaO55_RS08365 PF00005 ABC transporter SaO55_RS08370 PF01261 Xylose isomerase-like TIM barrel SaO55_RS08375 PF00270 DEAD/DEAH box helicase SaO55_RS08375 PF00271 Helicase conserved C-terminal domain SaO55_RS08380 PF01784 NIF3 (NGG1p interacting factor 3) SaO55_RS08385 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SaO55_RS08390 PF04539 Sigma-70 region 3 SaO55_RS08390 PF04542 Sigma-70 region 2 SaO55_RS08390 PF00140 Sigma-70 factor, region 1.2 SaO55_RS08390 PF03979 Sigma-70 factor, region 1.1 SaO55_RS08390 PF04545 Sigma-70, region 4 SaO55_RS08395 PF01807 CHC2 zinc finger SaO55_RS08395 PF08275 DNA primase catalytic core, N-terminal domain SaO55_RS08395 PF00772 DnaB-like helicase N terminal domain SaO55_RS08400 PF03618 Kinase/pyrophosphorylase SaO55_RS08405 PF00571 CBS domain SaO55_RS08405 PF08279 HTH domain SaO55_RS08410 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SaO55_RS08410 PF03129 Anticodon binding domain SaO55_RS08415 PF11967 Recombination protein O N terminal SaO55_RS08415 PF02565 Recombination protein O C terminal SaO55_RS08420 PF01926 50S ribosome-binding GTPase SaO55_RS08420 PF07650 KH domain SaO55_RS08425 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SaO55_RS08435 PF02130 Uncharacterized protein family UPF0054 SaO55_RS08440 PF02562 PhoH-like protein SaO55_RS08450 PF12127 SigmaW regulon antibacterial SaO55_RS08455 PF01972 Serine dehydrogenase proteinase SaO55_RS08455 PF01957 NfeD-like C-terminal, partner-binding SaO55_RS08460 PF01165 Ribosomal protein S21 SaO55_RS08465 PF00919 Uncharacterized protein family UPF0004 SaO55_RS08465 PF01938 TRAM domain SaO55_RS08465 PF04055 Radical SAM superfamily SaO55_RS08470 PF04452 RNA methyltransferase SaO55_RS08480 PF00226 DnaJ domain SaO55_RS08480 PF00684 DnaJ central domain SaO55_RS08480 PF01556 DnaJ C terminal domain SaO55_RS08485 PF00012 Hsp70 protein SaO55_RS08490 PF01025 GrpE SaO55_RS08495 PF01628 HrcA protein C terminal domain SaO55_RS08500 PF06969 HemN C-terminal domain SaO55_RS08500 PF04055 Radical SAM superfamily SaO55_RS08515 PF06421 GTP-binding protein LepA C-terminus SaO55_RS08515 PF00009 Elongation factor Tu GTP binding domain SaO55_RS08515 PF00679 Elongation factor G C-terminus SaO55_RS08515 PF03144 Elongation factor Tu domain 2 SaO55_RS08520 PF01649 Ribosomal protein S20 SaO55_RS08525 PF06144 DNA polymerase III, delta subunit SaO55_RS08530 PF03772 Competence protein SaO55_RS08530 PF13567 Domain of unknown function (DUF4131) SaO55_RS08530 PF00753 Metallo-beta-lactamase superfamily SaO55_RS08535 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SaO55_RS08540 PF00575 S1 RNA binding domain SaO55_RS08540 PF16921 Tex protein YqgF-like domain SaO55_RS08540 PF09371 Tex-like protein N-terminal domain SaO55_RS08540 PF17674 HHH domain SaO55_RS08545 PF13649 Methyltransferase domain SaO55_RS08555 PF01966 HD domain SaO55_RS08560 PF01467 Cytidylyltransferase-like SaO55_RS08565 PF01985 CRS1 / YhbY (CRM) domain SaO55_RS08570 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SaO55_RS08570 PF01488 Shikimate / quinate 5-dehydrogenase SaO55_RS08570 PF08501 Shikimate dehydrogenase substrate binding domain SaO55_RS08575 PF01926 50S ribosome-binding GTPase SaO55_RS08585 PF01048 Phosphorylase superfamily SaO55_RS08595 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SaO55_RS08600 PF02661 Fic/DOC family SaO55_RS08600 PF12728 Helix-turn-helix domain SaO55_RS08605 PF01566 Natural resistance-associated macrophage protein SaO55_RS08610 PF03746 LamB/YcsF family SaO55_RS08615 PF02785 Biotin carboxylase C-terminal domain SaO55_RS08615 PF00289 Biotin carboxylase, N-terminal domain SaO55_RS08615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SaO55_RS08620 PF00364 Biotin-requiring enzyme SaO55_RS08625 PF02626 Carboxyltransferase domain, subdomain A and B SaO55_RS08630 PF02682 Carboxyltransferase domain, subdomain C and D SaO55_RS08635 PF03449 Transcription elongation factor, N-terminal SaO55_RS08635 PF01272 Transcription elongation factor, GreA/GreB, C-term SaO55_RS08640 PF00485 Phosphoribulokinase / Uridine kinase family SaO55_RS08645 PF01136 Peptidase family U32 SaO55_RS08645 PF16325 Peptidase family U32 C-terminal domain SaO55_RS08650 PF01136 Peptidase family U32 SaO55_RS08660 PF06949 Protein of unknown function (DUF1292) SaO55_RS08665 PF03652 Holliday junction resolvase SaO55_RS08670 PF06135 IreB regulatory phosphoprotein SaO55_RS08675 PF02272 DHHA1 domain SaO55_RS08675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SaO55_RS08675 PF01411 tRNA synthetases class II (A) SaO55_RS08680 PF14490 Helix-hairpin-helix containing domain SaO55_RS08680 PF13538 UvrD-like helicase C-terminal domain SaO55_RS08680 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SaO55_RS08695 PF00266 Aminotransferase class-V SaO55_RS08700 PF00296 Luciferase-like monooxygenase SaO55_RS08710 PF05532 CsbD-like SaO55_RS08715 PF02082 Transcriptional regulator SaO55_RS08720 PF05496 Holliday junction DNA helicase RuvB P-loop domain SaO55_RS08720 PF12002 MgsA AAA+ ATPase C terminal SaO55_RS08720 PF16193 AAA C-terminal domain SaO55_RS08725 PF00899 ThiF family SaO55_RS08740 PF01336 OB-fold nucleic acid binding domain SaO55_RS08740 PF00152 tRNA synthetases class II (D, K and N) SaO55_RS08740 PF02938 GAD domain SaO55_RS08745 PF13393 Histidyl-tRNA synthetase SaO55_RS08745 PF03129 Anticodon binding domain SaO55_RS08750 PF01520 N-acetylmuramoyl-L-alanine amidase SaO55_RS08750 PF08239 Bacterial SH3 domain SaO55_RS08755 PF02580 D-Tyr-tRNA(Tyr) deacylase SaO55_RS08760 PF04607 Region found in RelA / SpoT proteins SaO55_RS08760 PF13291 ACT domain SaO55_RS08760 PF02824 TGS domain SaO55_RS08765 PF00156 Phosphoribosyl transferase domain SaO55_RS08770 PF01368 DHH family SaO55_RS08770 PF02272 DHHA1 domain SaO55_RS08770 PF17768 RecJ OB domain SaO55_RS08770 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SaO55_RS08775 PF07549 SecD/SecF GG Motif SaO55_RS08775 PF02355 Protein export membrane protein SaO55_RS08780 PF02699 Preprotein translocase subunit SaO55_RS08785 PF01702 Queuine tRNA-ribosyltransferase SaO55_RS08790 PF02547 Queuosine biosynthesis protein SaO55_RS08795 PF05496 Holliday junction DNA helicase RuvB P-loop domain SaO55_RS08795 PF17864 RuvB AAA lid domain SaO55_RS08795 PF05491 RuvB C-terminal winged helix domain SaO55_RS08800 PF07499 RuvA, C-terminal domain SaO55_RS08800 PF01330 RuvA N terminal domain SaO55_RS08810 PF01926 50S ribosome-binding GTPase SaO55_RS08810 PF01018 GTP1/OBG SaO55_RS08810 PF09269 Domain of unknown function (DUF1967) SaO55_RS08815 PF01016 Ribosomal L27 protein SaO55_RS08820 PF04327 Cysteine protease Prp SaO55_RS08825 PF00829 Ribosomal prokaryotic L21 protein SaO55_RS08860 PF04002 RadC-like JAB domain SaO55_RS08865 PF06750 Bacterial Peptidase A24 N-terminal domain SaO55_RS08865 PF01478 Type IV leader peptidase family SaO55_RS08875 PF02875 Mur ligase family, glutamate ligase domain SaO55_RS08875 PF08245 Mur ligase middle domain SaO55_RS08880 PF00133 tRNA synthetases class I (I, L, M and V) SaO55_RS08880 PF10458 Valyl tRNA synthetase tRNA binding arm SaO55_RS08880 PF08264 Anticodon-binding domain of tRNA SaO55_RS08885 PF03352 Methyladenine glycosylase SaO55_RS08900 PF00202 Aminotransferase class-III SaO55_RS08905 PF00490 Delta-aminolevulinic acid dehydratase SaO55_RS08915 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SaO55_RS08915 PF03900 Porphobilinogen deaminase, C-terminal domain SaO55_RS08920 PF01578 Cytochrome C assembly protein SaO55_RS08925 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SaO55_RS08925 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SaO55_RS08925 PF01488 Shikimate / quinate 5-dehydrogenase SaO55_RS08930 PF01926 50S ribosome-binding GTPase SaO55_RS08935 PF07724 AAA domain (Cdc48 subfamily) SaO55_RS08935 PF10431 C-terminal, D2-small domain, of ClpB protein SaO55_RS08935 PF06689 ClpX C4-type zinc finger SaO55_RS08940 PF05697 Bacterial trigger factor protein (TF) SaO55_RS08940 PF05698 Bacterial trigger factor protein (TF) C-terminus SaO55_RS08940 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SaO55_RS08965 PF00453 Ribosomal protein L20 SaO55_RS08970 PF01632 Ribosomal protein L35 SaO55_RS08975 PF05198 Translation initiation factor IF-3, N-terminal domain SaO55_RS08975 PF00707 Translation initiation factor IF-3, C-terminal domain SaO55_RS08980 PF00324 Amino acid permease SaO55_RS08985 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SaO55_RS08985 PF03129 Anticodon binding domain SaO55_RS08985 PF02824 TGS domain SaO55_RS08985 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SaO55_RS08995 PF07319 Primosomal protein DnaI N-terminus SaO55_RS08995 PF01695 IstB-like ATP binding protein SaO55_RS09005 PF03477 ATP cone domain SaO55_RS09010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SaO55_RS09010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SaO55_RS09015 PF01121 Dephospho-CoA kinase SaO55_RS09020 PF06827 Zinc finger found in FPG and IleRS SaO55_RS09020 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SaO55_RS09020 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SaO55_RS09025 PF01367 5'-3' exonuclease, C-terminal SAM fold SaO55_RS09025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SaO55_RS09025 PF00476 DNA polymerase family A SaO55_RS09035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS09035 PF00512 His Kinase A (phospho-acceptor) domain SaO55_RS09035 PF16736 Single Cache-like SaO55_RS09035 PF00989 PAS fold SaO55_RS09040 PF00072 Response regulator receiver domain SaO55_RS09040 PF00486 Transcriptional regulatory protein, C terminal SaO55_RS09050 PF00180 Isocitrate/isopropylmalate dehydrogenase SaO55_RS09055 PF00285 Citrate synthase, C-terminal domain SaO55_RS09060 PF00324 Amino acid permease SaO55_RS09065 PF00391 PEP-utilising enzyme, mobile domain SaO55_RS09065 PF00224 Pyruvate kinase, barrel domain SaO55_RS09065 PF02887 Pyruvate kinase, alpha/beta domain SaO55_RS09070 PF00365 Phosphofructokinase SaO55_RS09075 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SaO55_RS09080 PF01039 Carboxyl transferase domain SaO55_RS09080 PF17848 Acetyl-coA carboxylase zinc finger domain SaO55_RS09085 PF03949 Malic enzyme, NAD binding domain SaO55_RS09085 PF00390 Malic enzyme, N-terminal domain SaO55_RS09090 PF02811 PHP domain SaO55_RS09090 PF14579 Helix-hairpin-helix motif SaO55_RS09090 PF01336 OB-fold nucleic acid binding domain SaO55_RS09090 PF07733 Bacterial DNA polymerase III alpha NTPase domain SaO55_RS09090 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SaO55_RS09095 PF01368 DHH family SaO55_RS09095 PF02272 DHHA1 domain SaO55_RS09105 PF00571 CBS domain SaO55_RS09105 PF00392 Bacterial regulatory proteins, gntR family SaO55_RS09105 PF07085 DRTGG domain SaO55_RS09105 PF03061 Thioesterase superfamily SaO55_RS09120 PF01321 Creatinase/Prolidase N-terminal domain SaO55_RS09120 PF00557 Metallopeptidase family M24 SaO55_RS09130 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SaO55_RS09130 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SaO55_RS09135 PF00582 Universal stress protein family SaO55_RS09140 PF00871 Acetokinase family SaO55_RS09145 PF02384 N-6 DNA Methylase SaO55_RS09150 PF08534 Redoxin SaO55_RS09155 PF01925 Sulfite exporter TauE/SafE SaO55_RS09160 PF02568 Thiamine biosynthesis protein (ThiI) SaO55_RS09160 PF02926 THUMP domain SaO55_RS09165 PF00266 Aminotransferase class-V SaO55_RS09170 PF06160 Septation ring formation regulator, EzrA SaO55_RS09175 PF13185 GAF domain SaO55_RS09185 PF00163 Ribosomal protein S4/S9 N-terminal domain SaO55_RS09185 PF01479 S4 domain SaO55_RS09195 PF03009 Glycerophosphoryl diester phosphodiesterase family SaO55_RS09200 PF02566 OsmC-like protein SaO55_RS09205 PF00266 Aminotransferase class-V SaO55_RS09210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SaO55_RS09210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SaO55_RS09210 PF01842 ACT domain SaO55_RS09225 PF00367 phosphotransferase system, EIIB SaO55_RS09225 PF02378 Phosphotransferase system, EIIC SaO55_RS09230 PF01553 Acyltransferase SaO55_RS09235 PF13180 PDZ domain SaO55_RS09240 PF00579 tRNA synthetases class I (W and Y) SaO55_RS09240 PF01479 S4 domain SaO55_RS09245 PF00912 Transglycosylase SaO55_RS09245 PF00905 Penicillin binding protein transpeptidase domain SaO55_RS09255 PF04650 YSIRK type signal peptide SaO55_RS09255 PF05031 Iron Transport-associated domain SaO55_RS09265 PF01268 Formate--tetrahydrofolate ligase SaO55_RS09270 PF13193 AMP-binding enzyme C-terminal domain SaO55_RS09270 PF00501 AMP-binding enzyme SaO55_RS09275 PF00583 Acetyltransferase (GNAT) family SaO55_RS09280 PF00850 Histone deacetylase domain SaO55_RS09285 PF00356 Bacterial regulatory proteins, lacI family SaO55_RS09295 PF00793 DAHP synthetase I family SaO55_RS09295 PF01817 Chorismate mutase type II SaO55_RS09310 PF06103 Bacterial protein of unknown function (DUF948) SaO55_RS09315 PF08245 Mur ligase middle domain SaO55_RS09315 PF01225 Mur ligase family, catalytic domain SaO55_RS09315 PF02875 Mur ligase family, glutamate ligase domain SaO55_RS09320 PF17854 FtsK alpha domain SaO55_RS09320 PF09397 Ftsk gamma domain SaO55_RS09320 PF01580 FtsK/SpoIIIE family SaO55_RS09325 PF01588 Putative tRNA binding domain SaO55_RS09325 PF14794 Domain of unknown function (DUF4479) SaO55_RS09330 PF07285 Protein of unknown function (DUF1444) SaO55_RS09335 PF00085 Thioredoxin SaO55_RS09340 PF05343 M42 glutamyl aminopeptidase SaO55_RS09350 PF00753 Metallo-beta-lactamase superfamily SaO55_RS09355 PF02390 Putative methyltransferase SaO55_RS09360 PF01636 Phosphotransferase enzyme family SaO55_RS09365 PF01063 Amino-transferase class IV SaO55_RS09370 PF01546 Peptidase family M20/M25/M40 SaO55_RS09380 PF01479 S4 domain SaO55_RS09380 PF00849 RNA pseudouridylate synthase SaO55_RS09385 PF14667 Polysaccharide biosynthesis C-terminal domain SaO55_RS09385 PF01943 Polysaccharide biosynthesis protein SaO55_RS09395 PF04650 YSIRK type signal peptide SaO55_RS09395 PF01468 GA module SaO55_RS09395 PF07564 Domain of Unknown Function (DUF1542) SaO55_RS09405 PF13603 Leucyl-tRNA synthetase, Domain 2 SaO55_RS09405 PF08264 Anticodon-binding domain of tRNA SaO55_RS09405 PF09334 tRNA synthetases class I (M) SaO55_RS09405 PF00133 tRNA synthetases class I (I, L, M and V) SaO55_RS09410 PF07690 Major Facilitator Superfamily SaO55_RS09415 PF16199 Radical_SAM C-terminal domain SaO55_RS09415 PF04055 Radical SAM superfamily SaO55_RS09420 PF06962 Putative rRNA methylase SaO55_RS09425 PF01047 MarR family SaO55_RS09430 PF12146 Serine aminopeptidase, S33 SaO55_RS09445 PF01619 Proline dehydrogenase SaO55_RS09450 PF00885 6,7-dimethyl-8-ribityllumazine synthase SaO55_RS09455 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SaO55_RS09455 PF00925 GTP cyclohydrolase II SaO55_RS09460 PF00677 Lumazine binding domain SaO55_RS09465 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SaO55_RS09465 PF01872 RibD C-terminal domain SaO55_RS09475 PF01022 Bacterial regulatory protein, arsR family SaO55_RS09480 PF02040 Arsenical pump membrane protein SaO55_RS09485 PF01451 Low molecular weight phosphotyrosine protein phosphatase SaO55_RS09490 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SaO55_RS09490 PF13457 GW (Gly-Tryp) dipeptide domain SaO55_RS09500 PF04542 Sigma-70 region 2 SaO55_RS09520 PF00923 Transaldolase/Fructose-6-phosphate aldolase SaO55_RS09530 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SaO55_RS09535 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SaO55_RS09540 PF00248 Aldo/keto reductase family SaO55_RS09550 PF00438 S-adenosylmethionine synthetase, N-terminal domain SaO55_RS09550 PF02772 S-adenosylmethionine synthetase, central domain SaO55_RS09550 PF02773 S-adenosylmethionine synthetase, C-terminal domain SaO55_RS09555 PF01293 Phosphoenolpyruvate carboxykinase SaO55_RS09560 PF00326 Prolyl oligopeptidase family SaO55_RS09565 PF00293 NUDIX domain SaO55_RS09565 PF09297 NADH pyrophosphatase zinc ribbon domain SaO55_RS09570 PF01809 Putative membrane protein insertion efficiency factor SaO55_RS09580 PF13193 AMP-binding enzyme C-terminal domain SaO55_RS09580 PF00501 AMP-binding enzyme SaO55_RS09610 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SaO55_RS09610 PF02278 Polysaccharide lyase family 8, super-sandwich domain SaO55_RS09610 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SaO55_RS09640 PF00089 Trypsin SaO55_RS09655 PF00089 Trypsin SaO55_RS09660 PF00089 Trypsin SaO55_RS09665 PF00089 Trypsin SaO55_RS09690 PF00005 ABC transporter SaO55_RS09695 PF00082 Subtilase family SaO55_RS09700 PF02441 Flavoprotein SaO55_RS09705 PF05147 Lanthionine synthetase C-like protein SaO55_RS09710 PF04738 Lantibiotic dehydratase, N terminus SaO55_RS09710 PF14028 Lantibiotic biosynthesis dehydratase C-term SaO55_RS09715 PF02052 Gallidermin SaO55_RS09725 PF02052 Gallidermin SaO55_RS09730 PF07968 Leukocidin/Hemolysin toxin family SaO55_RS09735 PF07968 Leukocidin/Hemolysin toxin family SaO55_RS09755 PF00589 Phage integrase family SaO55_RS09810 PF01593 Flavin containing amine oxidoreductase SaO55_RS09815 PF00762 Ferrochelatase SaO55_RS09820 PF01208 Uroporphyrinogen decarboxylase (URO-D) SaO55_RS09840 PF00005 ABC transporter SaO55_RS09845 PF01230 HIT domain SaO55_RS09865 PF00639 PPIC-type PPIASE domain SaO55_RS09870 PF01966 HD domain SaO55_RS09880 PF00149 Calcineurin-like phosphoesterase SaO55_RS09895 PF06133 Control of competence regulator ComK, YlbF/YmcA SaO55_RS09900 PF04286 Protein of unknown function (DUF445) SaO55_RS09910 PF00072 Response regulator receiver domain SaO55_RS09910 PF00196 Bacterial regulatory proteins, luxR family SaO55_RS09915 PF13185 GAF domain SaO55_RS09915 PF07730 Histidine kinase SaO55_RS09920 PF00849 RNA pseudouridylate synthase SaO55_RS09920 PF01479 S4 domain SaO55_RS09925 PF10415 Fumarase C C-terminus SaO55_RS09925 PF00206 Lyase SaO55_RS09950 PF00588 SpoU rRNA Methylase family SaO55_RS09955 PF08331 Domain of unknown function (DUF1730) SaO55_RS09960 PF00005 ABC transporter SaO55_RS09965 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS10125 PF01475 Ferric uptake regulator family SaO55_RS10130 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SaO55_RS10130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SaO55_RS10135 PF00578 AhpC/TSA family SaO55_RS10140 PF00202 Aminotransferase class-III SaO55_RS10145 PF06081 Aromatic acid exporter family member 1 SaO55_RS10150 PF00664 ABC transporter transmembrane region SaO55_RS10150 PF00005 ABC transporter SaO55_RS10155 PF04167 Protein of unknown function (DUF402) SaO55_RS10160 PF00633 Helix-hairpin-helix motif SaO55_RS10160 PF00730 HhH-GPD superfamily base excision DNA repair protein SaO55_RS10160 PF14815 NUDIX domain SaO55_RS10165 PF04307 LexA-binding, inner membrane-associated putative hydrolase SaO55_RS10180 PF00005 ABC transporter SaO55_RS10180 PF01476 LysM domain SaO55_RS10190 PF02631 RecX family SaO55_RS10195 PF00912 Transglycosylase SaO55_RS10200 PF01965 DJ-1/PfpI family SaO55_RS10210 PF04055 Radical SAM superfamily SaO55_RS10210 PF08756 YfkB-like domain SaO55_RS10215 PF03061 Thioesterase superfamily SaO55_RS10220 PF02073 Thermophilic metalloprotease (M29) SaO55_RS10230 PF01451 Low molecular weight phosphotyrosine protein phosphatase SaO55_RS10240 PF03631 Virulence factor BrkB SaO55_RS10245 PF00196 Bacterial regulatory proteins, luxR family SaO55_RS10245 PF00072 Response regulator receiver domain SaO55_RS10250 PF07730 Histidine kinase SaO55_RS10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS10265 PF00557 Metallopeptidase family M24 SaO55_RS10280 PF06081 Aromatic acid exporter family member 1 SaO55_RS10295 PF07685 CobB/CobQ-like glutamine amidotransferase domain SaO55_RS10300 PF08245 Mur ligase middle domain SaO55_RS10300 PF08353 Domain of unknown function (DUF1727) SaO55_RS10305 PF00210 Ferritin-like domain SaO55_RS10320 PF11799 impB/mucB/samB family C-terminal domain SaO55_RS10320 PF00817 impB/mucB/samB family SaO55_RS10330 PF05958 tRNA (Uracil-5-)-methyltransferase SaO55_RS10335 PF00781 Diacylglycerol kinase catalytic domain SaO55_RS10345 PF02637 GatB domain SaO55_RS10345 PF02934 GatB/GatE catalytic domain SaO55_RS10350 PF01425 Amidase SaO55_RS10355 PF02686 Glu-tRNAGln amidotransferase C subunit SaO55_RS10360 PF00474 Sodium:solute symporter family SaO55_RS10365 PF01638 HxlR-like helix-turn-helix SaO55_RS10370 PF03060 Nitronate monooxygenase SaO55_RS10375 PF07537 CamS sex pheromone cAM373 precursor SaO55_RS10380 PF00533 BRCA1 C Terminus (BRCT) domain SaO55_RS10380 PF01653 NAD-dependent DNA ligase adenylation domain SaO55_RS10380 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SaO55_RS10380 PF03120 NAD-dependent DNA ligase OB-fold domain SaO55_RS10380 PF12826 Helix-hairpin-helix motif SaO55_RS10385 PF00580 UvrD/REP helicase N-terminal domain SaO55_RS10385 PF13361 UvrD-like helicase C-terminal domain SaO55_RS10390 PF01884 PcrB family SaO55_RS10395 PF01371 Trp repressor protein SaO55_RS10400 PF00206 Lyase SaO55_RS10400 PF10397 Adenylosuccinate lyase C-terminus SaO55_RS10410 PF14731 Staphopain proregion SaO55_RS10410 PF05543 Staphopain peptidase C47 SaO55_RS10420 PF14044 NETI protein SaO55_RS10425 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SaO55_RS10430 PF02540 NAD synthase SaO55_RS10435 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SaO55_RS10435 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SaO55_RS10435 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SaO55_RS10440 PF02898 Nitric oxide synthase, oxygenase domain SaO55_RS10445 PF00800 Prephenate dehydratase SaO55_RS10445 PF01842 ACT domain SaO55_RS10455 PF00939 Sodium:sulfate symporter transmembrane region SaO55_RS10465 PF00857 Isochorismatase family SaO55_RS10470 PF01368 DHH family SaO55_RS10470 PF02833 DHHA2 domain SaO55_RS10480 PF00171 Aldehyde dehydrogenase family SaO55_RS10485 PF10282 Lactonase, 7-bladed beta-propeller SaO55_RS10490 PF03965 Penicillinase repressor SaO55_RS10495 PF05569 BlaR1 peptidase M56 SaO55_RS10495 PF00905 Penicillin binding protein transpeptidase domain SaO55_RS10500 PF08139 Prokaryotic membrane lipoprotein lipid attachment site SaO55_RS10505 PF08863 YolD-like protein SaO55_RS10520 PF02899 Phage integrase, N-terminal SAM-like domain SaO55_RS10520 PF00589 Phage integrase family SaO55_RS10525 PF02899 Phage integrase, N-terminal SAM-like domain SaO55_RS10525 PF00589 Phage integrase family SaO55_RS10570 PF00005 ABC transporter SaO55_RS10580 PF00005 ABC transporter SaO55_RS10585 PF00392 Bacterial regulatory proteins, gntR family SaO55_RS10605 PF03642 MAP domain SaO55_RS10610 PF03642 MAP domain SaO55_RS10615 PF03372 Endonuclease/Exonuclease/phosphatase family SaO55_RS10620 PF07968 Leukocidin/Hemolysin toxin family SaO55_RS10625 PF07968 Leukocidin/Hemolysin toxin family SaO55_RS10630 PF01546 Peptidase family M20/M25/M40 SaO55_RS10630 PF07687 Peptidase dimerisation domain SaO55_RS10640 PF00155 Aminotransferase class I and II SaO55_RS10645 PF02386 Cation transport protein SaO55_RS10675 PF08764 Staphylococcus aureus coagulase SaO55_RS10675 PF04022 Staphylocoagulase repeat SaO55_RS10680 PF11546 Staphylococcal complement inhibitor SCIN SaO55_RS10745 PF14659 Phage integrase, N-terminal SAM-like domain SaO55_RS10745 PF00589 Phage integrase family SaO55_RS10750 PF00118 TCP-1/cpn60 chaperonin family SaO55_RS10755 PF00166 Chaperonin 10 Kd subunit SaO55_RS10760 PF02517 CPBP intramembrane metalloprotease SaO55_RS10775 PF00795 Carbon-nitrogen hydrolase SaO55_RS10780 PF05372 Delta lysin family SaO55_RS10785 PF04647 Accessory gene regulator B SaO55_RS10800 PF04397 LytTr DNA-binding domain SaO55_RS10800 PF00072 Response regulator receiver domain SaO55_RS10810 PF00294 pfkB family carbohydrate kinase SaO55_RS10815 PF00251 Glycosyl hydrolases family 32 N-terminal domain SaO55_RS10815 PF08244 Glycosyl hydrolases family 32 C terminal SaO55_RS10820 PF00356 Bacterial regulatory proteins, lacI family SaO55_RS10820 PF13407 Periplasmic binding protein domain SaO55_RS10825 PF00909 Ammonium Transporter Family SaO55_RS10830 PF01206 Sulfurtransferase TusA SaO55_RS10835 PF04143 Sulphur transport SaO55_RS10840 PF02629 CoA binding domain SaO55_RS10840 PF06971 Putative DNA-binding protein N-terminus SaO55_RS10845 PF12848 ABC transporter SaO55_RS10845 PF16326 ABC transporter C-terminal domain SaO55_RS10845 PF00005 ABC transporter SaO55_RS10860 PF01624 MutS domain I SaO55_RS10860 PF00488 MutS domain V SaO55_RS10860 PF05188 MutS domain II SaO55_RS10860 PF05192 MutS domain III SaO55_RS10860 PF05190 MutS family domain IV SaO55_RS10865 PF00814 Glycoprotease family SaO55_RS10870 PF00583 Acetyltransferase (GNAT) family SaO55_RS10875 PF00814 Glycoprotease family SaO55_RS10880 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SaO55_RS10890 PF00920 Dehydratase family SaO55_RS10895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SaO55_RS10895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SaO55_RS10895 PF00205 Thiamine pyrophosphate enzyme, central domain SaO55_RS10905 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SaO55_RS10905 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SaO55_RS10910 PF00682 HMGL-like SaO55_RS10910 PF08502 LeuA allosteric (dimerisation) domain SaO55_RS10915 PF00180 Isocitrate/isopropylmalate dehydrogenase SaO55_RS10920 PF00330 Aconitase family (aconitate hydratase) SaO55_RS10925 PF00694 Aconitase C-terminal domain SaO55_RS10930 PF00585 C-terminal regulatory domain of Threonine dehydratase SaO55_RS10930 PF00291 Pyridoxal-phosphate dependent enzyme SaO55_RS10965 PF10263 SprT-like family SaO55_RS10965 PF17283 SprT-like zinc ribbon domain SaO55_RS10970 PF17674 HHH domain SaO55_RS10970 PF00575 S1 RNA binding domain SaO55_RS10970 PF09371 Tex-like protein N-terminal domain SaO55_RS10970 PF16921 Tex protein YqgF-like domain SaO55_RS10975 PF04542 Sigma-70 region 2 SaO55_RS10975 PF04539 Sigma-70 region 3 SaO55_RS10975 PF04545 Sigma-70, region 4 SaO55_RS10980 PF13581 Histidine kinase-like ATPase domain SaO55_RS10985 PF01740 STAS domain SaO55_RS10990 PF07228 Stage II sporulation protein E (SpoIIE) SaO55_RS10990 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SaO55_RS11000 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SaO55_RS11010 PF00842 Alanine racemase, C-terminal domain SaO55_RS11010 PF01168 Alanine racemase, N-terminal domain SaO55_RS11015 PF01648 4'-phosphopantetheinyl transferase superfamily SaO55_RS11025 PF03703 Bacterial PH domain SaO55_RS11035 PF02669 K+-transporting ATPase, c chain SaO55_RS11045 PF03814 Potassium-transporting ATPase A subunit SaO55_RS11055 PF02702 Osmosensitive K+ channel His kinase sensor domain SaO55_RS11055 PF00512 His Kinase A (phospho-acceptor) domain SaO55_RS11055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS11055 PF13493 Domain of unknown function (DUF4118) SaO55_RS11060 PF00072 Response regulator receiver domain SaO55_RS11060 PF00486 Transcriptional regulatory protein, C terminal SaO55_RS11065 PF00270 DEAD/DEAH box helicase SaO55_RS11065 PF00271 Helicase conserved C-terminal domain SaO55_RS11070 PF08245 Mur ligase middle domain SaO55_RS11070 PF01225 Mur ligase family, catalytic domain SaO55_RS11070 PF02875 Mur ligase family, glutamate ligase domain SaO55_RS11075 PF07478 D-ala D-ala ligase C-terminus SaO55_RS11075 PF01820 D-ala D-ala ligase N-terminus SaO55_RS11080 PF01098 Cell cycle protein SaO55_RS11095 PF02583 Metal-sensitive transcriptional repressor SaO55_RS11100 PF13396 Phospholipase_D-nuclease N-terminal SaO55_RS11100 PF13091 PLD-like domain SaO55_RS11105 PF01966 HD domain SaO55_RS11120 PF02096 60Kd inner membrane protein SaO55_RS11125 PF02581 Thiamine monophosphate synthase SaO55_RS11130 PF02110 Hydroxyethylthiazole kinase family SaO55_RS11135 PF08543 Phosphomethylpyrimidine kinase SaO55_RS11140 PF03070 TENA/THI-4/PQQC family SaO55_RS11145 PF06737 Transglycosylase-like domain SaO55_RS11150 PF00436 Single-strand binding protein family SaO55_RS11160 PF07977 FabA-like domain SaO55_RS11165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SaO55_RS11190 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SaO55_RS11190 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SaO55_RS11195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SaO55_RS11195 PF02874 ATP synthase alpha/beta family, beta-barrel domain SaO55_RS11200 PF00231 ATP synthase SaO55_RS11205 PF02874 ATP synthase alpha/beta family, beta-barrel domain SaO55_RS11205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SaO55_RS11205 PF00306 ATP synthase alpha/beta chain, C terminal domain SaO55_RS11210 PF00213 ATP synthase delta (OSCP) subunit SaO55_RS11215 PF00430 ATP synthase B/B' CF(0) SaO55_RS11220 PF00137 ATP synthase subunit C SaO55_RS11225 PF00119 ATP synthase A chain SaO55_RS11235 PF02350 UDP-N-acetylglucosamine 2-epimerase SaO55_RS11245 PF00464 Serine hydroxymethyltransferase SaO55_RS11250 PF04260 Protein of unknown function (DUF436) SaO55_RS11255 PF01451 Low molecular weight phosphotyrosine protein phosphatase SaO55_RS11260 PF03481 Putative GTP-binding controlling metal-binding SaO55_RS11260 PF01300 Telomere recombination SaO55_RS11265 PF17827 PrmC N-terminal domain SaO55_RS11265 PF05175 Methyltransferase small domain SaO55_RS11270 PF03462 PCRF domain SaO55_RS11270 PF00472 RF-1 domain SaO55_RS11275 PF00265 Thymidine kinase SaO55_RS11285 PF01197 Ribosomal protein L31 SaO55_RS11290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SaO55_RS11290 PF07498 Rho termination factor, N-terminal domain SaO55_RS11290 PF07497 Rho termination factor, RNA-binding domain SaO55_RS11295 PF00171 Aldehyde dehydrogenase family SaO55_RS11305 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SaO55_RS11310 PF01116 Fructose-bisphosphate aldolase class-II SaO55_RS11320 PF06418 CTP synthase N-terminus SaO55_RS11320 PF00117 Glutamine amidotransferase class-I SaO55_RS11325 PF05066 HB1, ASXL, restriction endonuclease HTH domain SaO55_RS11335 PF03630 Fumble SaO55_RS11355 PF02664 S-Ribosylhomocysteinase (LuxS) SaO55_RS11365 PF00591 Glycosyl transferase family, a/b domain SaO55_RS11365 PF02885 Glycosyl transferase family, helical bundle domain SaO55_RS11365 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SaO55_RS11380 PF01048 Phosphorylase superfamily SaO55_RS11385 PF00210 Ferritin-like domain SaO55_RS11405 PF01238 Phosphomannose isomerase type I SaO55_RS11410 PF13460 NAD(P)H-binding SaO55_RS11415 PF01022 Bacterial regulatory protein, arsR family SaO55_RS11420 PF16916 Dimerisation domain of Zinc Transporter SaO55_RS11420 PF01545 Cation efflux family SaO55_RS11440 PF00005 ABC transporter SaO55_RS11445 PF01380 SIS domain SaO55_RS11450 PF02378 Phosphotransferase system, EIIC SaO55_RS11450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SaO55_RS11455 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SaO55_RS11455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SaO55_RS11455 PF00874 PRD domain SaO55_RS11455 PF05043 Mga helix-turn-helix domain SaO55_RS11455 PF08279 HTH domain SaO55_RS11460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SaO55_RS11465 PF01232 Mannitol dehydrogenase Rossmann domain SaO55_RS11465 PF08125 Mannitol dehydrogenase C-terminal domain SaO55_RS11470 PF01468 GA module SaO55_RS11470 PF07564 Domain of Unknown Function (DUF1542) SaO55_RS11475 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SaO55_RS11475 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SaO55_RS11475 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SaO55_RS11475 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SaO55_RS11485 PF02457 DisA bacterial checkpoint controller nucleotide-binding SaO55_RS11490 PF00491 Arginase family SaO55_RS11540 PF10609 NUBPL iron-transfer P-loop NTPase SaO55_RS11545 PF07690 Major Facilitator Superfamily SaO55_RS11550 PF17080 Multidrug Resistance efflux pump SaO55_RS11555 PF07690 Major Facilitator Superfamily SaO55_RS11560 PF03006 Haemolysin-III related SaO55_RS11565 PF01704 UTP--glucose-1-phosphate uridylyltransferase SaO55_RS11570 PF04307 LexA-binding, inner membrane-associated putative hydrolase SaO55_RS11580 PF07670 Nucleoside recognition SaO55_RS11585 PF01032 FecCD transport family SaO55_RS11590 PF01032 FecCD transport family SaO55_RS11595 PF01497 Periplasmic binding protein SaO55_RS11605 PF01168 Alanine racemase, N-terminal domain SaO55_RS11610 PF04183 IucA / IucC family SaO55_RS11610 PF06276 Ferric iron reductase FhuF-like transporter SaO55_RS11615 PF05977 Transmembrane secretion effector SaO55_RS11625 PF03780 Asp23 family, cell envelope-related function SaO55_RS11640 PF02028 BCCT, betaine/carnitine/choline family transporter SaO55_RS11645 PF00107 Zinc-binding dehydrogenase SaO55_RS11645 PF08240 Alcohol dehydrogenase GroES-like domain SaO55_RS11650 PF00107 Zinc-binding dehydrogenase SaO55_RS11650 PF16884 N-terminal domain of oxidoreductase SaO55_RS11660 PF00232 Glycosyl hydrolase family 1 SaO55_RS11665 PF02378 Phosphotransferase system, EIIC SaO55_RS11665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SaO55_RS11670 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SaO55_RS11675 PF01791 DeoC/LacD family aldolase SaO55_RS11680 PF00294 pfkB family carbohydrate kinase SaO55_RS11690 PF08220 DeoR-like helix-turn-helix domain SaO55_RS11690 PF00455 DeoR C terminal sensor domain SaO55_RS11695 PF02146 Sir2 family SaO55_RS11710 PF00248 Aldo/keto reductase family SaO55_RS11715 PF13411 MerR HTH family regulatory protein SaO55_RS11725 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SaO55_RS11725 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SaO55_RS11725 PF02278 Polysaccharide lyase family 8, super-sandwich domain SaO55_RS11735 PF05116 Sucrose-6F-phosphate phosphohydrolase SaO55_RS11745 PF03306 Alpha-acetolactate decarboxylase SaO55_RS11750 PF00205 Thiamine pyrophosphate enzyme, central domain SaO55_RS11750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SaO55_RS11750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SaO55_RS11765 PF00380 Ribosomal protein S9/S16 SaO55_RS11770 PF00572 Ribosomal protein L13 SaO55_RS11775 PF01416 tRNA pseudouridine synthase SaO55_RS11780 PF02361 Cobalt transport protein SaO55_RS11785 PF00005 ABC transporter SaO55_RS11790 PF00005 ABC transporter SaO55_RS11795 PF01196 Ribosomal protein L17 SaO55_RS11800 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SaO55_RS11800 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SaO55_RS11800 PF01000 RNA polymerase Rpb3/RpoA insert domain SaO55_RS11805 PF00411 Ribosomal protein S11 SaO55_RS11810 PF00416 Ribosomal protein S13/S18 SaO55_RS11815 PF00444 Ribosomal protein L36 SaO55_RS11820 PF01176 Translation initiation factor 1A / IF-1 SaO55_RS11825 PF05191 Adenylate kinase, active site lid SaO55_RS11830 PF00344 SecY translocase SaO55_RS11835 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SaO55_RS11840 PF00327 Ribosomal protein L30p/L7e SaO55_RS11845 PF03719 Ribosomal protein S5, C-terminal domain SaO55_RS11845 PF00333 Ribosomal protein S5, N-terminal domain SaO55_RS11850 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SaO55_RS11855 PF00347 Ribosomal protein L6 SaO55_RS11860 PF00410 Ribosomal protein S8 SaO55_RS11865 PF00253 Ribosomal protein S14p/S29e SaO55_RS11870 PF00281 Ribosomal protein L5 SaO55_RS11870 PF00673 ribosomal L5P family C-terminus SaO55_RS11875 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SaO55_RS11875 PF00467 KOW motif SaO55_RS11880 PF00238 Ribosomal protein L14p/L23e SaO55_RS11885 PF00366 Ribosomal protein S17 SaO55_RS11890 PF00831 Ribosomal L29 protein SaO55_RS11895 PF00252 Ribosomal protein L16p/L10e SaO55_RS11900 PF07650 KH domain SaO55_RS11900 PF00189 Ribosomal protein S3, C-terminal domain SaO55_RS11905 PF00237 Ribosomal protein L22p/L17e SaO55_RS11910 PF00203 Ribosomal protein S19 SaO55_RS11915 PF03947 Ribosomal Proteins L2, C-terminal domain SaO55_RS11915 PF00181 Ribosomal Proteins L2, RNA binding domain SaO55_RS11920 PF00276 Ribosomal protein L23 SaO55_RS11925 PF00573 Ribosomal protein L4/L1 family SaO55_RS11930 PF00297 Ribosomal protein L3 SaO55_RS11935 PF00338 Ribosomal protein S10p/S20e SaO55_RS11945 PF00860 Permease family SaO55_RS11950 PF01131 DNA topoisomerase SaO55_RS11950 PF01751 Toprim domain SaO55_RS11965 PF06800 Sugar transport protein SaO55_RS11990 PF00873 AcrB/AcrD/AcrF family SaO55_RS11995 PF02388 FemAB family SaO55_RS12010 PF01047 MarR family SaO55_RS12020 PF01047 MarR family SaO55_RS12030 PF04055 Radical SAM superfamily SaO55_RS12030 PF06463 Molybdenum Cofactor Synthesis C SaO55_RS12035 PF12804 MobA-like NTP transferase domain SaO55_RS12040 PF02597 ThiS family SaO55_RS12045 PF02391 MoaE protein SaO55_RS12050 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SaO55_RS12055 PF03453 MoeA N-terminal region (domain I and II) SaO55_RS12055 PF00994 Probable molybdopterin binding domain SaO55_RS12055 PF03454 MoeA C-terminal region (domain IV) SaO55_RS12060 PF01967 MoaC family SaO55_RS12065 PF00994 Probable molybdopterin binding domain SaO55_RS12070 PF00899 ThiF family SaO55_RS12075 PF03459 TOBE domain SaO55_RS12075 PF00005 ABC transporter SaO55_RS12080 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS12090 PF02634 FdhD/NarQ family SaO55_RS12100 PF02632 BioY family SaO55_RS12105 PF01156 Inosine-uridine preferring nucleoside hydrolase SaO55_RS12115 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SaO55_RS12115 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SaO55_RS12115 PF02770 Acyl-CoA dehydrogenase, middle domain SaO55_RS12120 PF03253 Urea transporter SaO55_RS12125 PF00547 Urease, gamma subunit SaO55_RS12130 PF00699 Urease beta subunit SaO55_RS12135 PF00449 Urease alpha-subunit, N-terminal domain SaO55_RS12135 PF01979 Amidohydrolase family SaO55_RS12140 PF05194 UreE urease accessory protein, C-terminal domain SaO55_RS12140 PF02814 UreE urease accessory protein, N-terminal domain SaO55_RS12145 PF01730 UreF SaO55_RS12150 PF02492 CobW/HypB/UreG, nucleotide-binding domain SaO55_RS12155 PF01774 UreD urease accessory protein SaO55_RS12185 PF05257 CHAP domain SaO55_RS12195 PF03553 Na+/H+ antiporter family SaO55_RS12200 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain SaO55_RS12200 PF02558 Ketopantoate reductase PanE/ApbA SaO55_RS12210 PF05257 CHAP domain SaO55_RS12220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SaO55_RS12220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SaO55_RS12225 PF01494 FAD binding domain SaO55_RS12230 PF13457 GW (Gly-Tryp) dipeptide domain SaO55_RS12230 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SaO55_RS12245 PF00384 Molybdopterin oxidoreductase SaO55_RS12245 PF01568 Molydopterin dinucleotide binding domain SaO55_RS12245 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SaO55_RS12245 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SaO55_RS12245 PF12838 4Fe-4S dicluster domain SaO55_RS12255 PF03816 Cell envelope-related transcriptional attenuator domain SaO55_RS12270 PF02517 CPBP intramembrane metalloprotease SaO55_RS12285 PF00324 Amino acid permease SaO55_RS12305 PF13419 Haloacid dehalogenase-like hydrolase SaO55_RS12310 PF01758 Sodium Bile acid symporter family SaO55_RS12320 PF00367 phosphotransferase system, EIIB SaO55_RS12320 PF02378 Phosphotransferase system, EIIC SaO55_RS12325 PF01380 SIS domain SaO55_RS12325 PF01418 Helix-turn-helix domain, rpiR family SaO55_RS12350 PF01546 Peptidase family M20/M25/M40 SaO55_RS12350 PF07687 Peptidase dimerisation domain SaO55_RS12355 PF01979 Amidohydrolase family SaO55_RS12360 PF17391 Urocanase N-terminal domain SaO55_RS12360 PF17392 Urocanase C-terminal domain SaO55_RS12360 PF01175 Urocanase Rossmann-like domain SaO55_RS12365 PF03466 LysR substrate binding domain SaO55_RS12365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SaO55_RS12370 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SaO55_RS12375 PF00491 Arginase family SaO55_RS12385 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SaO55_RS12390 PF03475 3-alpha domain SaO55_RS12390 PF03473 MOSC domain SaO55_RS12400 PF02694 Uncharacterised BCR, YnfA/UPF0060 family SaO55_RS12415 PF00005 ABC transporter SaO55_RS12415 PF13732 Domain of unknown function (DUF4162) SaO55_RS12420 PF05656 Protein of unknown function (DUF805) SaO55_RS12425 PF02245 Methylpurine-DNA glycosylase (MPG) SaO55_RS12435 PF03616 Sodium/glutamate symporter SaO55_RS12440 PF01070 FMN-dependent dehydrogenase SaO55_RS12445 PF01544 CorA-like Mg2+ transporter protein SaO55_RS12460 PF00934 PE family SaO55_RS12460 PF07859 alpha/beta hydrolase fold SaO55_RS12470 PF07690 Major Facilitator Superfamily SaO55_RS12485 PF07690 Major Facilitator Superfamily SaO55_RS12505 PF12802 MarR family SaO55_RS12520 PF00005 ABC transporter SaO55_RS12525 PF02687 FtsX-like permease family SaO55_RS12530 PF00072 Response regulator receiver domain SaO55_RS12530 PF00486 Transcriptional regulatory protein, C terminal SaO55_RS12535 PF00512 His Kinase A (phospho-acceptor) domain SaO55_RS12535 PF00672 HAMP domain SaO55_RS12535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS12540 PF04397 LytTr DNA-binding domain SaO55_RS12555 PF00005 ABC transporter SaO55_RS12565 PF06039 Malate:quinone oxidoreductase (Mqo) SaO55_RS12570 PF02652 L-lactate permease SaO55_RS12575 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SaO55_RS12585 PF13673 Acetyltransferase (GNAT) domain SaO55_RS12590 PF08240 Alcohol dehydrogenase GroES-like domain SaO55_RS12590 PF00107 Zinc-binding dehydrogenase SaO55_RS12600 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS12635 PF00367 phosphotransferase system, EIIB SaO55_RS12635 PF02378 Phosphotransferase system, EIIC SaO55_RS12650 PF16242 Pyridoxamine 5'-phosphate oxidase like SaO55_RS12665 PF00375 Sodium:dicarboxylate symporter family SaO55_RS12675 PF01047 MarR family SaO55_RS12680 PF00011 Hsp20/alpha crystallin family SaO55_RS12685 PF07690 Major Facilitator Superfamily SaO55_RS12690 PF00196 Bacterial regulatory proteins, luxR family SaO55_RS12690 PF00072 Response regulator receiver domain SaO55_RS12695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS12695 PF07730 Histidine kinase SaO55_RS12705 PF02665 Nitrate reductase gamma subunit SaO55_RS12715 PF14711 Respiratory nitrate reductase beta C-terminal SaO55_RS12715 PF13247 4Fe-4S dicluster domain SaO55_RS12720 PF01568 Molydopterin dinucleotide binding domain SaO55_RS12720 PF14710 Respiratory nitrate reductase alpha N-terminal SaO55_RS12720 PF00384 Molybdopterin oxidoreductase SaO55_RS12725 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SaO55_RS12730 PF00355 Rieske [2Fe-2S] domain SaO55_RS12735 PF04324 BFD-like [2Fe-2S] binding domain SaO55_RS12735 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SaO55_RS12735 PF07992 Pyridine nucleotide-disulphide oxidoreductase SaO55_RS12735 PF18267 Rubredoxin NAD+ reductase C-terminal domain SaO55_RS12735 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SaO55_RS12745 PF00583 Acetyltransferase (GNAT) family SaO55_RS12755 PF01226 Formate/nitrite transporter SaO55_RS12770 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SaO55_RS12770 PF01297 Zinc-uptake complex component A periplasmic SaO55_RS12775 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SaO55_RS12800 PF02388 FemAB family SaO55_RS12805 PF00005 ABC transporter SaO55_RS12810 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS12815 PF00497 Bacterial extracellular solute-binding proteins, family 3 SaO55_RS12820 PF07690 Major Facilitator Superfamily SaO55_RS12830 PF00300 Histidine phosphatase superfamily (branch 1) SaO55_RS12835 PF01545 Cation efflux family SaO55_RS12835 PF16916 Dimerisation domain of Zinc Transporter SaO55_RS12845 PF11621 C3 binding domain 4 of IgG-bind protein SBI SaO55_RS12845 PF02216 B domain SaO55_RS12855 PF07968 Leukocidin/Hemolysin toxin family SaO55_RS12865 PF07968 Leukocidin/Hemolysin toxin family SaO55_RS12875 PF03744 6-carboxyhexanoate--CoA ligase SaO55_RS12880 PF00155 Aminotransferase class I and II SaO55_RS12885 PF06968 Biotin and Thiamin Synthesis associated domain SaO55_RS12885 PF04055 Radical SAM superfamily SaO55_RS12890 PF00202 Aminotransferase class-III SaO55_RS12910 PF00664 ABC transporter transmembrane region SaO55_RS12910 PF00005 ABC transporter SaO55_RS12915 PF00005 ABC transporter SaO55_RS12915 PF04954 Siderophore-interacting protein SaO55_RS12915 PF08021 Siderophore-interacting FAD-binding domain SaO55_RS12915 PF00664 ABC transporter transmembrane region SaO55_RS12935 PF02595 Glycerate kinase family SaO55_RS12945 PF07690 Major Facilitator Superfamily SaO55_RS12960 PF00149 Calcineurin-like phosphoesterase SaO55_RS12965 PF00324 Amino acid permease SaO55_RS12970 PF00999 Sodium/hydrogen exchanger family SaO55_RS12980 PF13520 Amino acid permease SaO55_RS12990 PF00144 Beta-lactamase SaO55_RS13005 PF08546 Ketopantoate reductase PanE/ApbA C terminal SaO55_RS13005 PF02558 Ketopantoate reductase PanE/ApbA SaO55_RS13010 PF07690 Major Facilitator Superfamily SaO55_RS13015 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS13020 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SaO55_RS13025 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS13030 PF00571 CBS domain SaO55_RS13030 PF00005 ABC transporter SaO55_RS13045 PF08818 Domain of unknown function (DU1801) SaO55_RS13050 PF13520 Amino acid permease SaO55_RS13055 PF00135 Carboxylesterase family SaO55_RS13060 PF07690 Major Facilitator Superfamily SaO55_RS13065 PF03649 Uncharacterised protein family (UPF0014) SaO55_RS13070 PF00005 ABC transporter SaO55_RS13075 PF05343 M42 glutamyl aminopeptidase SaO55_RS13080 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SaO55_RS13095 PF06998 Protein of unknown function (DUF1307) SaO55_RS13100 PF01645 Conserved region in glutamate synthase SaO55_RS13110 PF07690 Major Facilitator Superfamily SaO55_RS13115 PF00005 ABC transporter SaO55_RS13120 PF00005 ABC transporter SaO55_RS13125 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS13125 PF12911 N-terminal TM domain of oligopeptide transport permease C SaO55_RS13130 PF00528 Binding-protein-dependent transport system inner membrane component SaO55_RS13135 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SaO55_RS13140 PF10100 Staphylopine dehydrogenase SaO55_RS13165 PF03806 AbgT putative transporter family SaO55_RS13170 PF02627 Carboxymuconolactone decarboxylase family SaO55_RS13215 PF00106 short chain dehydrogenase SaO55_RS13240 PF04507 Csa1 family SaO55_RS13245 PF04507 Csa1 family SaO55_RS13250 PF04507 Csa1 family SaO55_RS13260 PF00293 NUDIX domain SaO55_RS13265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SaO55_RS13265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SaO55_RS13265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SaO55_RS13265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SaO55_RS13280 PF00483 Nucleotidyl transferase SaO55_RS13285 PF04650 YSIRK type signal peptide SaO55_RS13285 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SaO55_RS13285 PF17961 Bacterial Ig domain SaO55_RS13285 PF02986 Fibronectin binding repeat SaO55_RS13285 PF00746 LPXTG cell wall anchor motif SaO55_RS13295 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SaO55_RS13295 PF04650 YSIRK type signal peptide SaO55_RS13295 PF00746 LPXTG cell wall anchor motif SaO55_RS13295 PF17961 Bacterial Ig domain SaO55_RS13295 PF02986 Fibronectin binding repeat SaO55_RS13310 PF02447 GntP family permease SaO55_RS13315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SaO55_RS13315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SaO55_RS13320 PF07729 FCD domain SaO55_RS13320 PF00392 Bacterial regulatory proteins, gntR family SaO55_RS13325 PF13411 MerR HTH family regulatory protein SaO55_RS13330 PF04607 Region found in RelA / SpoT proteins SaO55_RS13335 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) SaO55_RS13350 PF07690 Major Facilitator Superfamily SaO55_RS13355 PF09335 SNARE associated Golgi protein SaO55_RS13365 PF07690 Major Facilitator Superfamily SaO55_RS13370 PF01047 MarR family SaO55_RS13385 PF00005 ABC transporter SaO55_RS13395 PF06874 Firmicute fructose-1,6-bisphosphatase SaO55_RS13405 PF01738 Dienelactone hydrolase family SaO55_RS13410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SaO55_RS13415 PF01047 MarR family SaO55_RS13425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SaO55_RS13430 PF00881 Nitroreductase family SaO55_RS13435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SaO55_RS13435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SaO55_RS13445 PF00005 ABC transporter SaO55_RS13455 PF04203 Sortase domain SaO55_RS13475 PF03313 Serine dehydratase alpha chain SaO55_RS13480 PF01842 ACT domain SaO55_RS13480 PF03315 Serine dehydratase beta chain SaO55_RS13495 PF00892 EamA-like transporter family SaO55_RS13500 PF07859 alpha/beta hydrolase fold SaO55_RS13500 PF00934 PE family SaO55_RS13520 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SaO55_RS13520 PF02378 Phosphotransferase system, EIIC SaO55_RS13520 PF00367 phosphotransferase system, EIIB SaO55_RS13525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SaO55_RS13525 PF00205 Thiamine pyrophosphate enzyme, central domain SaO55_RS13525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SaO55_RS13530 PF04172 LrgB-like family SaO55_RS13535 PF03788 LrgA family SaO55_RS13540 PF03466 LysR substrate binding domain SaO55_RS13540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SaO55_RS13550 PF05257 CHAP domain SaO55_RS13555 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SaO55_RS13560 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SaO55_RS13560 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SaO55_RS13565 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SaO55_RS13565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SaO55_RS13570 PF10431 C-terminal, D2-small domain, of ClpB protein SaO55_RS13570 PF00004 ATPase family associated with various cellular activities (AAA) SaO55_RS13570 PF07724 AAA domain (Cdc48 subfamily) SaO55_RS13570 PF17871 AAA lid domain SaO55_RS13580 PF02421 Ferrous iron transport protein B SaO55_RS13580 PF07670 Nucleoside recognition SaO55_RS13580 PF07664 Ferrous iron transport protein B C terminus SaO55_RS13580 PF17910 FeoB cytosolic helical domain SaO55_RS13590 PF03176 MMPL family SaO55_RS13605 PF00171 Aldehyde dehydrogenase family SaO55_RS13610 PF12464 Maltose acetyltransferase SaO55_RS13610 PF14602 Hexapeptide repeat of succinyl-transferase SaO55_RS13610 PF00132 Bacterial transferase hexapeptide (six repeats) SaO55_RS13620 PF00403 Heavy-metal-associated domain SaO55_RS13625 PF00403 Heavy-metal-associated domain SaO55_RS13630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SaO55_RS13630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SaO55_RS13635 PF00155 Aminotransferase class I and II SaO55_RS13640 PF01593 Flavin containing amine oxidoreductase SaO55_RS13655 PF01593 Flavin containing amine oxidoreductase SaO55_RS13670 PF01757 Acyltransferase family SaO55_RS13675 PF00583 Acetyltransferase (GNAT) family SaO55_RS13680 PF01464 Transglycosylase SLT domain SaO55_RS13705 PF05979 Bacterial protein of unknown function (DUF896) SaO55_RS13725 PF00440 Bacterial regulatory proteins, tetR family SaO55_RS13730 PF00106 short chain dehydrogenase SaO55_RS13740 PF00561 alpha/beta hydrolase fold SaO55_RS13745 PF07683 Cobalamin synthesis protein cobW C-terminal domain SaO55_RS13745 PF02492 CobW/HypB/UreG, nucleotide-binding domain SaO55_RS13780 PF03881 Fructosamine kinase SaO55_RS13785 PF01180 Dihydroorotate dehydrogenase SaO55_RS13795 PF02677 Epoxyqueuosine reductase QueH SaO55_RS13820 PF02261 Aspartate decarboxylase SaO55_RS13825 PF02569 Pantoate-beta-alanine ligase SaO55_RS13830 PF02548 Ketopantoate hydroxymethyltransferase SaO55_RS13835 PF02558 Ketopantoate reductase PanE/ApbA SaO55_RS13835 PF08546 Ketopantoate reductase PanE/ApbA C terminal SaO55_RS13840 PF03306 Alpha-acetolactate decarboxylase SaO55_RS13845 PF00056 lactate/malate dehydrogenase, NAD binding domain SaO55_RS13845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SaO55_RS13855 PF13520 Amino acid permease SaO55_RS13870 PF00274 Fructose-bisphosphate aldolase class-I SaO55_RS13875 PF06039 Malate:quinone oxidoreductase (Mqo) SaO55_RS13885 PF00501 AMP-binding enzyme SaO55_RS13885 PF13193 AMP-binding enzyme C-terminal domain SaO55_RS13900 PF00732 GMC oxidoreductase SaO55_RS13900 PF05199 GMC oxidoreductase SaO55_RS13905 PF00171 Aldehyde dehydrogenase family SaO55_RS13920 PF02028 BCCT, betaine/carnitine/choline family transporter SaO55_RS13940 PF03477 ATP cone domain SaO55_RS13940 PF13597 Anaerobic ribonucleoside-triphosphate reductase SaO55_RS13945 PF03600 Citrate transporter SaO55_RS13950 PF14824 Sirohaem biosynthesis protein central SaO55_RS13955 PF00258 Flavodoxin SaO55_RS13955 PF00667 FAD binding domain SaO55_RS13955 PF00175 Oxidoreductase NAD-binding domain SaO55_RS13965 PF00255 Glutathione peroxidase SaO55_RS13990 PF00005 ABC transporter SaO55_RS13995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SaO55_RS14000 PF00072 Response regulator receiver domain SaO55_RS14000 PF00486 Transcriptional regulatory protein, C terminal SaO55_RS14010 PF00245 Alkaline phosphatase SaO55_RS14020 PF01047 MarR family SaO55_RS14030 PF17961 Bacterial Ig domain SaO55_RS14030 PF04650 YSIRK type signal peptide SaO55_RS14030 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SaO55_RS14030 PF00746 LPXTG cell wall anchor motif SaO55_RS14035 PF00027 Cyclic nucleotide-binding domain SaO55_RS14035 PF13545 Crp-like helix-turn-helix domain SaO55_RS14040 PF00696 Amino acid kinase family SaO55_RS14045 PF13520 Amino acid permease SaO55_RS14050 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SaO55_RS14050 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SaO55_RS14065 PF01316 Arginine repressor, DNA binding domain SaO55_RS14065 PF02863 Arginine repressor, C-terminal domain SaO55_RS14070 PF07504 Fungalysin/Thermolysin Propeptide Motif SaO55_RS14070 PF03413 Peptidase propeptide and YPEB domain SaO55_RS14070 PF01447 Thermolysin metallopeptidase, catalytic domain SaO55_RS14070 PF02868 Thermolysin metallopeptidase, alpha-helical domain SaO55_RS14085 PF08279 HTH domain SaO55_RS14085 PF05043 Mga helix-turn-helix domain SaO55_RS14085 PF00874 PRD domain SaO55_RS14085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SaO55_RS14090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SaO55_RS14090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SaO55_RS14090 PF02378 Phosphotransferase system, EIIC SaO55_RS14095 PF01238 Phosphomannose isomerase type I SaO55_RS14100 PF01061 ABC-2 type transporter SaO55_RS14105 PF05257 CHAP domain SaO55_RS14105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SaO55_RS14110 PF00550 Phosphopantetheine attachment site SaO55_RS14110 PF00857 Isochorismatase family SaO55_RS14115 PF01468 GA module SaO55_RS14125 PF00534 Glycosyl transferases group 1 SaO55_RS14130 PF07517 SecA DEAD-like domain SaO55_RS14130 PF01043 SecA preprotein cross-linking domain SaO55_RS14130 PF07516 SecA Wing and Scaffold domain SaO55_RS14135 PF15432 Accessory Sec secretory system ASP3 SaO55_RS14140 PF16929 Accessory Sec system GspB-transporter SaO55_RS14145 PF16993 Accessory Sec system protein Asp1 SaO55_RS14150 PF00344 SecY translocase SaO55_RS14155 PF00746 LPXTG cell wall anchor motif SaO55_RS14160 PF01613 Flavin reductase like domain SaO55_RS14190 PF01613 Flavin reductase like domain SaO55_RS14195 PF01625 Peptide methionine sulfoxide reductase SaO55_RS14195 PF01641 SelR domain SaO55_RS14210 PF13614 AAA domain SaO55_RS14215 PF02706 Chain length determinant protein SaO55_RS14220 PF00440 Bacterial regulatory proteins, tetR family SaO55_RS14220 PF18665 Tetracyclin repressor-like, C-terminal domain SaO55_RS14225 PF00535 Glycosyl transferase family 2 SaO55_RS14235 PF01522 Polysaccharide deacetylase SaO55_RS14240 PF01757 Acyltransferase family SaO55_RS14245 PF04650 YSIRK type signal peptide SaO55_RS14250 PF01502 Phosphoribosyl-AMP cyclohydrolase SaO55_RS14250 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SaO55_RS14255 PF00977 Histidine biosynthesis protein SaO55_RS14260 PF00977 Histidine biosynthesis protein SaO55_RS14265 PF00117 Glutamine amidotransferase class-I SaO55_RS14270 PF00475 Imidazoleglycerol-phosphate dehydratase SaO55_RS14275 PF00155 Aminotransferase class I and II SaO55_RS14280 PF00815 Histidinol dehydrogenase SaO55_RS14285 PF01634 ATP phosphoribosyltransferase SaO55_RS14290 PF13393 Histidyl-tRNA synthetase SaO55_RS14305 PF04264 YceI-like domain SaO55_RS14310 PF08450 SMP-30/Gluconolactonase/LRE-like region SaO55_RS14315 PF17773 UPF0176 acylphosphatase like domain SaO55_RS14315 PF12368 Rhodanase C-terminal SaO55_RS14315 PF00581 Rhodanese-like domain SaO55_RS14320 PF01470 Pyroglutamyl peptidase SaO55_RS14330 PF05738 Cna protein B-type domain SaO55_RS14330 PF05737 Collagen binding domain SaO55_RS14330 PF17802 Prealbumin-like fold domain SaO55_RS14330 PF05737 Collagen binding domain SaO55_RS14330 PF17802 Prealbumin-like fold domain SaO55_RS14330 PF05738 Cna protein B-type domain SaO55_RS14335 PF00939 Sodium:sulfate symporter transmembrane region SaO55_RS14340 PF00892 EamA-like transporter family SaO55_RS14350 PF03824 High-affinity nickel-transport protein SaO55_RS14355 PF00797 N-acetyltransferase SaO55_RS14365 PF00005 ABC transporter SaO55_RS14370 PF02687 FtsX-like permease family SaO55_RS14380 PF00313 'Cold-shock' DNA-binding domain SaO55_RS14405 PF02195 ParB-like nuclease domain SaO55_RS14405 PF17762 HTH domain found in ParB protein SaO55_RS14410 PF02527 rRNA small subunit methyltransferase G SaO55_RS14415 PF01134 Glucose inhibited division protein A SaO55_RS14415 PF13932 GidA associated domain SaO55_RS14420 PF12631 MnmE helical domain SaO55_RS14420 PF01926 50S ribosome-binding GTPase SaO55_RS14420 PF10396 GTP-binding protein TrmE N-terminus SaO55_RS14425 PF00825 Ribonuclease P SaO55_RS14430 PF00468 Ribosomal protein L34