BRL61_RS00005 SM00382 ATPases associated with a variety of cellular activities BRL61_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BRL61_RS00010 SM00480 DNA polymerase III beta subunit BRL61_RS00025 SM00387 Histidine kinase-like ATPases BRL61_RS00025 SM00433 TopoisomeraseII BRL61_RS00030 SM00434 DNA Topoisomerase IV BRL61_RS00075 SM00267 diguanylate cyclase BRL61_RS00095 SM00788 Adenylosuccinate synthetase BRL61_RS00110 SM00448 cheY-homologous receiver domain BRL61_RS00110 SM00862 Transcriptional regulatory protein, C terminal BRL61_RS00115 SM00091 PAS domain BRL61_RS00115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL61_RS00115 SM00387 Histidine kinase-like ATPases BRL61_RS00115 SM00388 His Kinase A (phosphoacceptor) domain BRL61_RS00130 SM00849 Metallo-beta-lactamase superfamily BRL61_RS00165 SM00100 Cyclic nucleotide-monophosphate binding domain BRL61_RS00165 SM00419 helix_turn_helix, cAMP Regulatory protein BRL61_RS00220 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS00245 SM00382 ATPases associated with a variety of cellular activities BRL61_RS00325 SM00148 Phospholipase C, catalytic domain (part); domain X BRL61_RS00335 SM00342 helix_turn_helix, arabinose operon control protein BRL61_RS00370 SM00257 Lysin motif BRL61_RS00380 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL61_RS00440 SM00470 ParB-like nuclease domain BRL61_RS00455 SM00822 BRL61_RS00455 BRL61_RS00505 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL61_RS00520 SM01133 BRL61_RS00520 BRL61_RS00545 SM00062 Bacterial periplasmic substrate-binding proteins BRL61_RS00565 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS00645 SM00984 UDP binding domain BRL61_RS00685 SM00382 ATPases associated with a variety of cellular activities BRL61_RS00745 SM00859 Semialdehyde dehydrogenase, NAD binding domain BRL61_RS00805 SM00487 DEAD-like helicases superfamily BRL61_RS00815 SM00382 ATPases associated with a variety of cellular activities BRL61_RS00850 SM00382 ATPases associated with a variety of cellular activities BRL61_RS00895 SM00342 helix_turn_helix, arabinose operon control protein BRL61_RS00895 SM00448 cheY-homologous receiver domain BRL61_RS00960 SM00882 Coenzyme A transferase BRL61_RS01050 SM00829 Enoylreductase BRL61_RS01060 SM00829 Enoylreductase BRL61_RS01110 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRL61_RS01110 SM00387 Histidine kinase-like ATPases BRL61_RS01115 SM00448 cheY-homologous receiver domain BRL61_RS01115 SM00850 LytTr DNA-binding domain BRL61_RS01135 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL61_RS01135 SM00866 BRL61_RS01135 BRL61_RS01185 SM00354 helix_turn _helix lactose operon repressor BRL61_RS01215 SM00382 ATPases associated with a variety of cellular activities BRL61_RS01405 SM00382 ATPases associated with a variety of cellular activities BRL61_RS01440 SM01130 BRL61_RS01440 BRL61_RS01500 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS01505 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS01550 SM00482 DNA polymerase A domain BRL61_RS01665 SM00990 BRL61_RS01665 BRL61_RS01670 SM00487 DEAD-like helicases superfamily BRL61_RS01680 SM00507 HNH nucleases BRL61_RS01735 SM00635 Bacterial Ig-like domain 2 BRL61_RS01800 SM00287 Bacterial SH3 domain homologues BRL61_RS01800 SM00644 BRL61_RS01800 BRL61_RS01840 SM00506 Appr-1"-p processing enzyme BRL61_RS01885 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL61_RS01965 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS01975 SM00382 ATPases associated with a variety of cellular activities BRL61_RS02025 SM00470 ParB-like nuclease domain BRL61_RS02110 SM00855 Phosphoglycerate mutase family BRL61_RS02190 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL61_RS02190 SM01240 BRL61_RS02190 BRL61_RS02370 SM00833 Cobalamin synthesis protein cobW C-terminal domain BRL61_RS02405 SM00014 Acid phosphatase homologues BRL61_RS02435 SM00382 ATPases associated with a variety of cellular activities BRL61_RS02435 SM00930 BRL61_RS02435 BRL61_RS02450 SM00257 Lysin motif BRL61_RS02505 SM00642 Alpha-amylase domain BRL61_RS02510 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL61_RS02510 SM00866 BRL61_RS02510 BRL61_RS02530 SM00382 ATPases associated with a variety of cellular activities BRL61_RS02540 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRL61_RS02540 SM00493 BRL61_RS02540 BRL61_RS02615 SM00465 GIY-YIG type nucleases (URI domain) BRL61_RS02635 SM00493 BRL61_RS02635 BRL61_RS02640 SM00650 Ribosomal RNA adenine dimethylases BRL61_RS02680 SM01400 BRL61_RS02680 BRL61_RS02700 SM00487 DEAD-like helicases superfamily BRL61_RS02700 SM00490 helicase superfamily c-terminal domain BRL61_RS02700 SM00982 BRL61_RS02700 BRL61_RS02700 SM01058 CarD-like/TRCF domain BRL61_RS02715 SM00363 S4 RNA-binding domain BRL61_RS02725 SM00316 Ribosomal protein S1-like RNA-binding domain BRL61_RS02730 SM00977 TilS substrate C-terminal domain BRL61_RS02740 SM00382 ATPases associated with a variety of cellular activities BRL61_RS02760 SM00905 Dihydroneopterin aldolase BRL61_RS02855 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL61_RS02895 SM00382 ATPases associated with a variety of cellular activities BRL61_RS02895 SM01086 C-terminal, D2-small domain, of ClpB protein BRL61_RS02900 SM00382 ATPases associated with a variety of cellular activities BRL61_RS02905 SM00670 Large family of predicted nucleotide-binding domains BRL61_RS02925 SM00840 BRL61_RS02925 BRL61_RS02930 SM00535 Ribonuclease III family BRL61_RS02935 SM00967 RNA 2'-O ribose methyltransferase substrate binding BRL61_RS02960 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BRL61_RS02960 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BRL61_RS02965 SM00649 Ribosomal protein L11/L12 BRL61_RS02995 SM00663 RNA polymerase I subunit A N-terminus BRL61_RS03015 SM00838 Elongation factor G C-terminus BRL61_RS03015 SM00889 Elongation factor G, domain IV BRL61_RS03135 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BRL61_RS03190 SM00986 Uracil DNA glycosylase superfamily BRL61_RS03190 SM00987 UreE urease accessory protein, C-terminal domain BRL61_RS03320 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL61_RS03330 SM00829 Enoylreductase BRL61_RS03345 SM00836 DALR anticodon binding domain BRL61_RS03345 SM01016 Arginyl tRNA synthetase N terminal dom BRL61_RS03350 SM00478 endonuclease III BRL61_RS03480 SM00382 ATPases associated with a variety of cellular activities BRL61_RS03485 SM00529 Helix-turn-helix diphteria tox regulatory element BRL61_RS03485 SM00899 BRL61_RS03485 BRL61_RS03500 SM00382 ATPases associated with a variety of cellular activities BRL61_RS03530 SM00382 ATPases associated with a variety of cellular activities BRL61_RS03550 SM00382 ATPases associated with a variety of cellular activities BRL61_RS03570 SM01120 BRL61_RS03570 BRL61_RS03615 SM00448 cheY-homologous receiver domain BRL61_RS03615 SM00862 Transcriptional regulatory protein, C terminal BRL61_RS03620 SM00387 Histidine kinase-like ATPases BRL61_RS03625 SM00382 ATPases associated with a variety of cellular activities BRL61_RS03645 SM00257 Lysin motif BRL61_RS03655 SM00342 helix_turn_helix, arabinose operon control protein BRL61_RS03755 SM00382 ATPases associated with a variety of cellular activities BRL61_RS03760 SM00382 ATPases associated with a variety of cellular activities BRL61_RS03765 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL61_RS03770 SM00833 Cobalamin synthesis protein cobW C-terminal domain BRL61_RS03825 SM00420 helix_turn_helix, Deoxyribose operon repressor BRL61_RS03825 SM01134 BRL61_RS03825 BRL61_RS03845 SM01091 Transporter associated domain BRL61_RS03860 SM00387 Histidine kinase-like ATPases BRL61_RS03860 SM00388 His Kinase A (phosphoacceptor) domain BRL61_RS03865 SM00448 cheY-homologous receiver domain BRL61_RS03865 SM00862 Transcriptional regulatory protein, C terminal BRL61_RS03920 SM00796 Allophanate hydrolase subunit 1 BRL61_RS03925 SM00797 Allophanate hydrolase subunit 2 BRL61_RS03935 SM00382 ATPases associated with a variety of cellular activities BRL61_RS03940 SM00341 Helicase and RNase D C-terminal BRL61_RS03940 SM00487 DEAD-like helicases superfamily BRL61_RS03940 SM00490 helicase superfamily c-terminal domain BRL61_RS03940 SM00956 BRL61_RS03940 BRL61_RS03945 SM00382 ATPases associated with a variety of cellular activities BRL61_RS03970 SM00046 Diacylglycerol kinase catalytic domain (presumed) BRL61_RS04035 SM00382 ATPases associated with a variety of cellular activities BRL61_RS04095 SM00267 diguanylate cyclase BRL61_RS04115 SM00487 DEAD-like helicases superfamily BRL61_RS04115 SM00490 helicase superfamily c-terminal domain BRL61_RS04130 SM00957 SecA DEAD-like domain BRL61_RS04130 SM00958 SecA preprotein cross-linking domain BRL61_RS04140 SM00937 BRL61_RS04140 BRL61_RS04155 SM00257 Lysin motif BRL61_RS04170 SM00487 DEAD-like helicases superfamily BRL61_RS04170 SM00490 helicase superfamily c-terminal domain BRL61_RS04200 SM00028 Tetratricopeptide repeats BRL61_RS04235 SM00919 Malic enzyme, NAD binding domain BRL61_RS04235 SM01274 BRL61_RS04235 BRL61_RS04255 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BRL61_RS04275 SM01192 BRL61_RS04275 BRL61_RS04275 SM01193 BRL61_RS04275 BRL61_RS04295 SM00316 Ribosomal protein S1-like RNA-binding domain BRL61_RS04295 SM00357 Cold shock protein domain BRL61_RS04295 SM00955 BRL61_RS04295 BRL61_RS04355 SM00318 Staphylococcal nuclease homologues BRL61_RS04360 SM00357 Cold shock protein domain BRL61_RS04400 SM00855 Phosphoglycerate mutase family BRL61_RS04480 SM00382 ATPases associated with a variety of cellular activities BRL61_RS04490 SM00493 BRL61_RS04490 BRL61_RS04500 SM00382 ATPases associated with a variety of cellular activities BRL61_RS04500 SM00930 BRL61_RS04500 BRL61_RS04540 SM00382 ATPases associated with a variety of cellular activities BRL61_RS04600 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL61_RS04745 SM01298 BRL61_RS04745 BRL61_RS04755 SM00316 Ribosomal protein S1-like RNA-binding domain BRL61_RS04770 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BRL61_RS04870 SM00382 ATPases associated with a variety of cellular activities BRL61_RS04870 SM01086 C-terminal, D2-small domain, of ClpB protein BRL61_RS04915 SM00825 Beta-ketoacyl synthase BRL61_RS04935 SM00382 ATPases associated with a variety of cellular activities BRL61_RS04940 SM00382 ATPases associated with a variety of cellular activities BRL61_RS04965 SM00382 ATPases associated with a variety of cellular activities BRL61_RS05035 SM01118 BRL61_RS05035 BRL61_RS05045 SM00954 Region found in RelA / SpoT proteins BRL61_RS05060 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL61_RS05060 SM00924 MgtE intracellular N domain BRL61_RS05135 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL61_RS05165 SM00914 BRL61_RS05165 BRL61_RS05210 SM00382 ATPases associated with a variety of cellular activities BRL61_RS05315 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL61_RS05325 SM00047 Lysozyme subfamily 2 BRL61_RS05325 SM00644 BRL61_RS05325 BRL61_RS05390 SM01001 AIR carboxylase BRL61_RS05410 SM01211 BRL61_RS05410 BRL61_RS05435 SM00798 AICARFT/IMPCHase bienzyme BRL61_RS05435 SM00851 MGS-like domain BRL61_RS05440 SM01209 BRL61_RS05440 BRL61_RS05440 SM01210 BRL61_RS05440 BRL61_RS05455 SM00382 ATPases associated with a variety of cellular activities BRL61_RS05525 SM00849 Metallo-beta-lactamase superfamily BRL61_RS05555 SM00861 Transketolase, pyrimidine binding domain BRL61_RS05575 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS05580 SM00382 ATPases associated with a variety of cellular activities BRL61_RS05630 SM00838 Elongation factor G C-terminus BRL61_RS05655 SM00878 Biotin carboxylase C-terminal domain BRL61_RS05740 SM00725 NEAr Transporter domain BRL61_RS05745 SM00725 NEAr Transporter domain BRL61_RS05750 SM00725 NEAr Transporter domain BRL61_RS05785 SM00967 RNA 2'-O ribose methyltransferase substrate binding BRL61_RS05795 SM00873 B3/4 domain BRL61_RS05795 SM00874 tRNA synthetase B5 domain BRL61_RS05795 SM00896 Ferredoxin-fold anticodon binding domain BRL61_RS05815 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRL61_RS05815 SM00481 DNA polymerase alpha chain like domain BRL61_RS05815 SM00483 DNA polymerase X family BRL61_RS05820 SM00463 Small MutS-related domain BRL61_RS05820 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BRL61_RS05820 SM00534 ATPase domain of DNA mismatch repair MUTS family BRL61_RS05835 SM00465 GIY-YIG type nucleases (URI domain) BRL61_RS06035 SM00740 BRL61_RS06035 BRL61_RS06055 SM00842 Cell division protein FtsA BRL61_RS06060 SM00864 Tubulin/FtsZ family, GTPase domain BRL61_RS06060 SM00865 Tubulin/FtsZ family, C-terminal domain BRL61_RS06085 SM00363 S4 RNA-binding domain BRL61_RS06115 SM00363 S4 RNA-binding domain BRL61_RS06140 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BRL61_RS06145 SM00851 MGS-like domain BRL61_RS06145 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BRL61_RS06145 SM01209 BRL61_RS06145 BRL61_RS06150 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BRL61_RS06175 SM00072 Guanylate kinase homologues. BRL61_RS06180 SM01409 BRL61_RS06180 BRL61_RS06190 SM00487 DEAD-like helicases superfamily BRL61_RS06190 SM00490 helicase superfamily c-terminal domain BRL61_RS06225 SM00331 Sigma factor PP2C-like phosphatases BRL61_RS06225 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BRL61_RS06230 SM00220 Serine/Threonine protein kinases, catalytic domain BRL61_RS06230 SM00740 BRL61_RS06230 BRL61_RS06245 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BRL61_RS06260 SM01120 BRL61_RS06260 BRL61_RS06260 SM01121 BRL61_RS06260 BRL61_RS06265 SM00487 DEAD-like helicases superfamily BRL61_RS06265 SM00490 helicase superfamily c-terminal domain BRL61_RS06280 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BRL61_RS06285 SM00822 BRL61_RS06285 BRL61_RS06300 SM00358 Double-stranded RNA binding motif BRL61_RS06300 SM00535 Ribonuclease III family BRL61_RS06305 SM00968 SMC proteins Flexible Hinge Domain BRL61_RS06310 SM00382 ATPases associated with a variety of cellular activities BRL61_RS06310 SM00962 SRP54-type protein, GTPase domain BRL61_RS06310 SM00963 SRP54-type protein, helical bundle domain BRL61_RS06320 SM00382 ATPases associated with a variety of cellular activities BRL61_RS06320 SM00962 SRP54-type protein, GTPase domain BRL61_RS06320 SM00963 SRP54-type protein, helical bundle domain BRL61_RS06365 SM00881 CoA binding domain BRL61_RS06370 SM00257 Lysin motif BRL61_RS06385 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BRL61_RS06385 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BRL61_RS06385 SM00493 BRL61_RS06385 BRL61_RS06405 SM00382 ATPases associated with a variety of cellular activities BRL61_RS06405 SM01086 C-terminal, D2-small domain, of ClpB protein BRL61_RS06465 SM00479 BRL61_RS06465 BRL61_RS06465 SM00481 DNA polymerase alpha chain like domain BRL61_RS06480 SM00316 Ribosomal protein S1-like RNA-binding domain BRL61_RS06480 SM00322 K homology RNA-binding domain BRL61_RS06510 SM00904 Riboflavin kinase BRL61_RS06515 SM01387 BRL61_RS06515 BRL61_RS06520 SM00316 Ribosomal protein S1-like RNA-binding domain BRL61_RS06520 SM00322 K homology RNA-binding domain BRL61_RS06530 SM00849 Metallo-beta-lactamase superfamily BRL61_RS06535 SM00382 ATPases associated with a variety of cellular activities BRL61_RS06535 SM00843 BRL61_RS06535 BRL61_RS06540 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL61_RS06540 SM00866 BRL61_RS06540 BRL61_RS06565 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS06575 SM00852 Probable molybdopterin binding domain BRL61_RS06580 SM00382 ATPases associated with a variety of cellular activities BRL61_RS06585 SM00322 K homology RNA-binding domain BRL61_RS06585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL61_RS06615 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL61_RS06630 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BRL61_RS06630 SM00534 ATPase domain of DNA mismatch repair MUTS family BRL61_RS06635 SM00853 MutL C terminal dimerisation domain BRL61_RS06635 SM01340 BRL61_RS06635 BRL61_RS06690 SM00422 helix_turn_helix, mercury resistance BRL61_RS06695 SM01230 BRL61_RS06695 BRL61_RS06830 SM00155 Phospholipase D. Active site motifs. BRL61_RS06840 SM00382 ATPases associated with a variety of cellular activities BRL61_RS06855 SM00421 helix_turn_helix, Lux Regulon BRL61_RS06855 SM00448 cheY-homologous receiver domain BRL61_RS06870 SM00318 Staphylococcal nuclease homologues BRL61_RS06925 SM01060 BRL61_RS06925 BRL61_RS06940 SM01240 BRL61_RS06940 BRL61_RS06970 SM00861 Transketolase, pyrimidine binding domain BRL61_RS07030 SM01207 BRL61_RS07030 BRL61_RS07035 SM00387 Histidine kinase-like ATPases BRL61_RS07035 SM00433 TopoisomeraseII BRL61_RS07040 SM00434 DNA Topoisomerase IV BRL61_RS07055 SM01061 CAT RNA binding domain BRL61_RS07170 SM00382 ATPases associated with a variety of cellular activities BRL61_RS07175 SM00382 ATPases associated with a variety of cellular activities BRL61_RS07210 SM00382 ATPases associated with a variety of cellular activities BRL61_RS07235 SM00382 ATPases associated with a variety of cellular activities BRL61_RS07245 SM00859 Semialdehyde dehydrogenase, NAD binding domain BRL61_RS07250 SM01130 BRL61_RS07250 BRL61_RS07270 SM01005 Alanine racemase, C-terminal domain BRL61_RS07285 SM00357 Cold shock protein domain BRL61_RS07320 SM00327 von Willebrand factor (vWF) type A domain BRL61_RS07345 SM00861 Transketolase, pyrimidine binding domain BRL61_RS07355 SM00387 Histidine kinase-like ATPases BRL61_RS07355 SM00388 His Kinase A (phosphoacceptor) domain BRL61_RS07360 SM00448 cheY-homologous receiver domain BRL61_RS07360 SM00862 Transcriptional regulatory protein, C terminal BRL61_RS07375 SM00014 Acid phosphatase homologues BRL61_RS07390 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL61_RS07390 SM00245 tail specific protease BRL61_RS07440 SM00567 E-Z type HEAT repeats BRL61_RS07440 SM00932 Scaffold protein Nfu/NifU N terminal BRL61_RS07445 SM00932 Scaffold protein Nfu/NifU N terminal BRL61_RS07485 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BRL61_RS07485 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BRL61_RS07490 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BRL61_RS07490 SM00475 5'-3' exonuclease BRL61_RS07515 SM00981 BRL61_RS07515 BRL61_RS07555 SM00478 endonuclease III BRL61_RS07555 SM00525 BRL61_RS07555 BRL61_RS07570 SM00479 BRL61_RS07570 BRL61_RS07570 SM00491 BRL61_RS07570 BRL61_RS07605 SM00914 BRL61_RS07605 BRL61_RS07610 SM00028 Tetratricopeptide repeats BRL61_RS07630 SM00562 BRL61_RS07630 BRL61_RS07655 SM00411 bacterial (prokaryotic) histone like domain BRL61_RS07670 SM00316 Ribosomal protein S1-like RNA-binding domain BRL61_RS07695 SM00870 BRL61_RS07695 BRL61_RS07710 SM00257 Lysin motif BRL61_RS07715 SM00487 DEAD-like helicases superfamily BRL61_RS07715 SM00490 helicase superfamily c-terminal domain BRL61_RS07770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL61_RS07770 SM00387 Histidine kinase-like ATPases BRL61_RS07770 SM00388 His Kinase A (phosphoacceptor) domain BRL61_RS07775 SM00448 cheY-homologous receiver domain BRL61_RS07775 SM00862 Transcriptional regulatory protein, C terminal BRL61_RS07780 SM00363 S4 RNA-binding domain BRL61_RS07845 SM00342 helix_turn_helix, arabinose operon control protein BRL61_RS07845 SM00871 Bacterial transcription activator, effector binding domain BRL61_RS07850 SM00642 Alpha-amylase domain BRL61_RS07855 SM00354 helix_turn _helix lactose operon repressor BRL61_RS07880 SM01350 BRL61_RS07880 BRL61_RS07910 SM00861 Transketolase, pyrimidine binding domain BRL61_RS07960 SM00878 Biotin carboxylase C-terminal domain BRL61_RS07970 SM00841 Elongation factor P, C-terminal BRL61_RS07970 SM01185 BRL61_RS07970 BRL61_RS07995 SM00450 Rhodanese Homology Domain BRL61_RS08055 SM00849 Metallo-beta-lactamase superfamily BRL61_RS08110 SM00382 ATPases associated with a variety of cellular activities BRL61_RS08115 SM00518 AP endonuclease family 2 BRL61_RS08120 SM00487 DEAD-like helicases superfamily BRL61_RS08120 SM00490 helicase superfamily c-terminal domain BRL61_RS08140 SM00400 zinc finger BRL61_RS08140 SM00493 BRL61_RS08140 BRL61_RS08150 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL61_RS08210 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL61_RS08225 SM00271 DnaJ molecular chaperone homology domain BRL61_RS08245 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL61_RS08255 SM00838 Elongation factor G C-terminus BRL61_RS08270 SM00849 Metallo-beta-lactamase superfamily BRL61_RS08280 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRL61_RS08295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL61_RS08305 SM01103 BRL61_RS08305 BRL61_RS08360 SM00878 Biotin carboxylase C-terminal domain BRL61_RS08370 SM00797 Allophanate hydrolase subunit 2 BRL61_RS08375 SM00796 Allophanate hydrolase subunit 1 BRL61_RS08410 SM00732 Likely ribonuclease with RNase H fold. BRL61_RS08420 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BRL61_RS08425 SM00382 ATPases associated with a variety of cellular activities BRL61_RS08430 SM00028 Tetratricopeptide repeats BRL61_RS08475 SM00382 ATPases associated with a variety of cellular activities BRL61_RS08505 SM00287 Bacterial SH3 domain homologues BRL61_RS08505 SM00646 BRL61_RS08505 BRL61_RS08515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL61_RS08515 SM00954 Region found in RelA / SpoT proteins BRL61_RS08535 SM01323 BRL61_RS08535 BRL61_RS08550 SM00382 ATPases associated with a variety of cellular activities BRL61_RS08555 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRL61_RS08660 SM01004 Delta-aminolevulinic acid dehydratase BRL61_RS08690 SM00382 ATPases associated with a variety of cellular activities BRL61_RS08690 SM00994 ClpX C4-type zinc finger BRL61_RS08690 SM01086 C-terminal, D2-small domain, of ClpB protein BRL61_RS08740 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BRL61_RS08765 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BRL61_RS08775 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BRL61_RS08775 SM01232 BRL61_RS08775 BRL61_RS08780 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BRL61_RS08780 SM00474 3'-5' exonuclease BRL61_RS08780 SM00475 5'-3' exonuclease BRL61_RS08780 SM00482 DNA polymerase A domain BRL61_RS08790 SM00387 Histidine kinase-like ATPases BRL61_RS08790 SM00388 His Kinase A (phosphoacceptor) domain BRL61_RS08795 SM00448 cheY-homologous receiver domain BRL61_RS08795 SM00862 Transcriptional regulatory protein, C terminal BRL61_RS08805 SM01329 BRL61_RS08805 BRL61_RS08840 SM00919 Malic enzyme, NAD binding domain BRL61_RS08840 SM01274 BRL61_RS08840 BRL61_RS08845 SM00481 DNA polymerase alpha chain like domain BRL61_RS08860 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL61_RS08870 SM00849 Metallo-beta-lactamase superfamily BRL61_RS08885 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BRL61_RS08885 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BRL61_RS08915 SM00981 BRL61_RS08915 BRL61_RS08935 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BRL61_RS08940 SM00363 S4 RNA-binding domain BRL61_RS08940 SM01390 BRL61_RS08940 BRL61_RS08985 SM00563 Phosphate acyltransferases BRL61_RS08990 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BRL61_RS08995 SM00363 S4 RNA-binding domain BRL61_RS09005 SM00725 NEAr Transporter domain BRL61_RS09035 SM00354 helix_turn _helix lactose operon repressor BRL61_RS09045 SM00830 Chorismate mutase type II BRL61_RS09070 SM00843 BRL61_RS09070 BRL61_RS09100 SM00849 Metallo-beta-lactamase superfamily BRL61_RS09130 SM00363 S4 RNA-binding domain BRL61_RS09150 SM00450 Rhodanese Homology Domain BRL61_RS09165 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL61_RS09175 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL61_RS09225 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BRL61_RS09235 SM00047 Lysozyme subfamily 2 BRL61_RS09320 SM01234 BRL61_RS09320 BRL61_RS09340 SM00894 Excalibur calcium-binding domain BRL61_RS09365 SM00901 BRL61_RS09365 BRL61_RS09485 SM00974 BRL61_RS09485 BRL61_RS09625 SM00382 ATPases associated with a variety of cellular activities BRL61_RS09650 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL61_RS09685 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS09690 SM00421 helix_turn_helix, Lux Regulon BRL61_RS09690 SM00448 cheY-homologous receiver domain BRL61_RS09735 SM00382 ATPases associated with a variety of cellular activities BRL61_RS09740 SM00062 Bacterial periplasmic substrate-binding proteins BRL61_RS09925 SM00382 ATPases associated with a variety of cellular activities BRL61_RS09935 SM00478 endonuclease III BRL61_RS10075 SM00635 Bacterial Ig-like domain 2 BRL61_RS10140 SM00507 HNH nucleases BRL61_RS10290 SM01040 BRO family, N-terminal domain BRL61_RS10310 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS10315 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS10365 SM00226 Low molecular weight phosphatase family BRL61_RS10380 SM00421 helix_turn_helix, Lux Regulon BRL61_RS10380 SM00448 cheY-homologous receiver domain BRL61_RS10385 SM00387 Histidine kinase-like ATPases BRL61_RS10455 SM00479 BRL61_RS10455 BRL61_RS10475 SM00046 Diacylglycerol kinase catalytic domain (presumed) BRL61_RS10490 SM00845 GatB domain BRL61_RS10515 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BRL61_RS10515 SM00292 breast cancer carboxy-terminal domain BRL61_RS10515 SM00532 Ligase N family BRL61_RS10535 SM00998 Adenylosuccinate lyase C-terminus BRL61_RS10590 SM00710 Parallel beta-helix repeats BRL61_RS10600 SM01131 BRL61_RS10600 BRL61_RS10660 SM00382 ATPases associated with a variety of cellular activities BRL61_RS10670 SM00382 ATPases associated with a variety of cellular activities BRL61_RS10675 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL61_RS10755 SM00883 Chaperonin 10 Kd subunit BRL61_RS10790 SM00793 Accessory gene regulator B BRL61_RS10795 SM00794 Staphylococcal AgrD protein BRL61_RS10805 SM00448 cheY-homologous receiver domain BRL61_RS10805 SM00850 LytTr DNA-binding domain BRL61_RS10815 SM00640 Glycosyl hydrolases family 32 BRL61_RS10820 SM00354 helix_turn _helix lactose operon repressor BRL61_RS10840 SM00881 CoA binding domain BRL61_RS10845 SM00382 ATPases associated with a variety of cellular activities BRL61_RS10855 SM00534 ATPase domain of DNA mismatch repair MUTS family BRL61_RS10905 SM00917 LeuA allosteric (dimerisation) domain BRL61_RS10910 SM01329 BRL61_RS10910 BRL61_RS10975 SM00731 SprT homologues. BRL61_RS10980 SM00316 Ribosomal protein S1-like RNA-binding domain BRL61_RS10980 SM00732 Likely ribonuclease with RNase H fold. BRL61_RS11000 SM00331 Sigma factor PP2C-like phosphatases BRL61_RS11000 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BRL61_RS11020 SM01005 Alanine racemase, C-terminal domain BRL61_RS11065 SM00387 Histidine kinase-like ATPases BRL61_RS11065 SM00388 His Kinase A (phosphoacceptor) domain BRL61_RS11070 SM00448 cheY-homologous receiver domain BRL61_RS11070 SM00862 Transcriptional regulatory protein, C terminal BRL61_RS11075 SM00487 DEAD-like helicases superfamily BRL61_RS11075 SM00490 helicase superfamily c-terminal domain BRL61_RS11115 SM00155 Phospholipase D. Active site motifs. BRL61_RS11120 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BRL61_RS11215 SM00382 ATPases associated with a variety of cellular activities BRL61_RS11275 SM00226 Low molecular weight phosphatase family BRL61_RS11290 SM00937 BRL61_RS11290 BRL61_RS11310 SM00357 Cold shock protein domain BRL61_RS11310 SM00382 ATPases associated with a variety of cellular activities BRL61_RS11310 SM00959 Rho termination factor, N-terminal domain BRL61_RS11385 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BRL61_RS11395 SM01133 BRL61_RS11395 BRL61_RS11435 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BRL61_RS11475 SM00382 ATPases associated with a variety of cellular activities BRL61_RS11690 SM00829 Enoylreductase BRL61_RS11695 SM00829 Enoylreductase BRL61_RS11720 SM01133 BRL61_RS11720 BRL61_RS11735 SM00420 helix_turn_helix, Deoxyribose operon repressor BRL61_RS11735 SM01134 BRL61_RS11735 BRL61_RS11765 SM00422 helix_turn_helix, mercury resistance BRL61_RS11845 SM00382 ATPases associated with a variety of cellular activities BRL61_RS11850 SM00382 ATPases associated with a variety of cellular activities BRL61_RS11860 SM00662 RNA polymerases D BRL61_RS11880 SM00316 Ribosomal protein S1-like RNA-binding domain BRL61_RS11935 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BRL61_RS11940 SM01374 BRL61_RS11940 BRL61_RS11960 SM00322 K homology RNA-binding domain BRL61_RS11975 SM01382 BRL61_RS11975 BRL61_RS11975 SM01383 BRL61_RS11975 BRL61_RS11995 SM01403 BRL61_RS11995 BRL61_RS12010 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BRL61_RS12010 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BRL61_RS12010 SM00493 BRL61_RS12010 BRL61_RS12065 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL61_RS12095 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL61_RS12120 SM00852 Probable molybdopterin binding domain BRL61_RS12130 SM00852 Probable molybdopterin binding domain BRL61_RS12140 SM00382 ATPases associated with a variety of cellular activities BRL61_RS12205 SM00988 UreE urease accessory protein, N-terminal domain BRL61_RS12245 SM00342 helix_turn_helix, arabinose operon control protein BRL61_RS12305 SM00047 Lysozyme subfamily 2 BRL61_RS12320 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BRL61_RS12320 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BRL61_RS12335 SM00420 helix_turn_helix, Deoxyribose operon repressor BRL61_RS12485 SM00382 ATPases associated with a variety of cellular activities BRL61_RS12580 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL61_RS12590 SM00382 ATPases associated with a variety of cellular activities BRL61_RS12600 SM00448 cheY-homologous receiver domain BRL61_RS12600 SM00862 Transcriptional regulatory protein, C terminal BRL61_RS12605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BRL61_RS12605 SM00387 Histidine kinase-like ATPases BRL61_RS12605 SM00388 His Kinase A (phosphoacceptor) domain BRL61_RS12610 SM00850 LytTr DNA-binding domain BRL61_RS12625 SM00382 ATPases associated with a variety of cellular activities BRL61_RS12660 SM00829 Enoylreductase BRL61_RS12715 SM00342 helix_turn_helix, arabinose operon control protein BRL61_RS12740 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL61_RS12765 SM00422 helix_turn_helix, mercury resistance BRL61_RS12770 SM00421 helix_turn_helix, Lux Regulon BRL61_RS12770 SM00448 cheY-homologous receiver domain BRL61_RS12775 SM00387 Histidine kinase-like ATPases BRL61_RS12800 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BRL61_RS12885 SM00382 ATPases associated with a variety of cellular activities BRL61_RS12895 SM00062 Bacterial periplasmic substrate-binding proteins BRL61_RS12895 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BRL61_RS12915 SM00855 Phosphoglycerate mutase family BRL61_RS12975 SM00729 Elongator protein 3, MiaB family, Radical SAM BRL61_RS12975 SM00876 Biotin and Thiamin Synthesis associated domain BRL61_RS13000 SM00382 ATPases associated with a variety of cellular activities BRL61_RS13005 SM00382 ATPases associated with a variety of cellular activities BRL61_RS13040 SM00871 Bacterial transcription activator, effector binding domain BRL61_RS13115 SM00116 Domain in cystathionine beta-synthase and other proteins. BRL61_RS13115 SM00382 ATPases associated with a variety of cellular activities BRL61_RS13145 SM00382 ATPases associated with a variety of cellular activities BRL61_RS13190 SM00382 ATPases associated with a variety of cellular activities BRL61_RS13195 SM00382 ATPases associated with a variety of cellular activities BRL61_RS13320 SM00487 DEAD-like helicases superfamily BRL61_RS13320 SM00490 helicase superfamily c-terminal domain BRL61_RS13380 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL61_RS13380 SM00895 BRL61_RS13380 BRL61_RS13385 SM00422 helix_turn_helix, mercury resistance BRL61_RS13390 SM00954 Region found in RelA / SpoT proteins BRL61_RS13425 SM00345 helix_turn_helix gluconate operon transcriptional repressor BRL61_RS13440 SM00382 ATPases associated with a variety of cellular activities BRL61_RS13470 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL61_RS13620 SM00382 ATPases associated with a variety of cellular activities BRL61_RS13620 SM01086 C-terminal, D2-small domain, of ClpB protein BRL61_RS13635 SM00899 BRL61_RS13635 BRL61_RS13660 SM01266 BRL61_RS13660 BRL61_RS13860 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BRL61_RS14040 SM00382 ATPases associated with a variety of cellular activities BRL61_RS14045 SM00387 Histidine kinase-like ATPases BRL61_RS14050 SM00448 cheY-homologous receiver domain BRL61_RS14050 SM00862 Transcriptional regulatory protein, C terminal BRL61_RS14060 SM00098 Alkaline phosphatase homologues BRL61_RS14070 SM00347 helix_turn_helix multiple antibiotic resistance protein BRL61_RS14155 SM00047 Lysozyme subfamily 2 BRL61_RS14180 SM00957 SecA DEAD-like domain BRL61_RS14180 SM00958 SecA preprotein cross-linking domain BRL61_RS14210 SM00903 Flavin reductase like domain BRL61_RS14235 SM00903 Flavin reductase like domain BRL61_RS14360 SM00382 ATPases associated with a variety of cellular activities BRL61_RS14375 SM00867 YceI-like domain BRL61_RS14385 SM00450 Rhodanese Homology Domain BRL61_RS14440 SM00382 ATPases associated with a variety of cellular activities BRL61_RS14475 SM00357 Cold shock protein domain BRL61_RS14480 SM00530 Helix-turn-helix XRE-family like proteins BRL61_RS14505 SM00470 ParB-like nuclease domain BRL61_RS14515 SM01228 BRL61_RS14515