EX97_RS00005	SM00382	ATPases associated with a variety of cellular activities
EX97_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
EX97_RS00010	SM00480	DNA polymerase III beta subunit
EX97_RS00025	SM00387	Histidine kinase-like ATPases
EX97_RS00025	SM00433	TopoisomeraseII
EX97_RS00030	SM00434	DNA Topoisomerase IV
EX97_RS00070	SM00267	diguanylate cyclase
EX97_RS00085	SM00788	Adenylosuccinate synthetase
EX97_RS00100	SM00448	cheY-homologous receiver domain
EX97_RS00100	SM00862	Transcriptional regulatory protein, C terminal
EX97_RS00105	SM00091	PAS domain
EX97_RS00105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
EX97_RS00105	SM00387	Histidine kinase-like ATPases
EX97_RS00105	SM00388	His Kinase A (phosphoacceptor) domain
EX97_RS00120	SM00849	Metallo-beta-lactamase superfamily
EX97_RS00195	SM00857	Resolvase, N terminal domain
EX97_RS00200	SM00857	Resolvase, N terminal domain
EX97_RS00225	SM00450	Rhodanese Homology Domain
EX97_RS00230	SM00849	Metallo-beta-lactamase superfamily
EX97_RS00275	SM00829	Enoylreductase
EX97_RS00380	SM00382	ATPases associated with a variety of cellular activities
EX97_RS00385	SM00382	ATPases associated with a variety of cellular activities
EX97_RS00435	SM00450	Rhodanese Homology Domain
EX97_RS00440	SM00450	Rhodanese Homology Domain
EX97_RS00440	SM00849	Metallo-beta-lactamase superfamily
EX97_RS00510	SM00148	Phospholipase C, catalytic domain (part); domain X
EX97_RS00535	SM00342	helix_turn_helix, arabinose operon control protein
EX97_RS00565	SM00345	helix_turn_helix gluconate operon transcriptional repressor
EX97_RS00580	SM00257	Lysin motif
EX97_RS00585	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS00645	SM00470	ParB-like nuclease domain
EX97_RS00665	SM00822	EX97_RS00665
EX97_RS00710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
EX97_RS00730	SM01133	EX97_RS00730
EX97_RS00750	SM00382	ATPases associated with a variety of cellular activities
EX97_RS00755	SM00062	Bacterial periplasmic substrate-binding proteins
EX97_RS00870	SM00984	UDP binding domain
EX97_RS00910	SM00382	ATPases associated with a variety of cellular activities
EX97_RS00970	SM00859	Semialdehyde dehydrogenase, NAD binding domain
EX97_RS01030	SM00487	DEAD-like helicases superfamily
EX97_RS01050	SM00382	ATPases associated with a variety of cellular activities
EX97_RS01090	SM00382	ATPases associated with a variety of cellular activities
EX97_RS01135	SM00342	helix_turn_helix, arabinose operon control protein
EX97_RS01135	SM00448	cheY-homologous receiver domain
EX97_RS01210	SM00882	Coenzyme A transferase
EX97_RS01290	SM00829	Enoylreductase
EX97_RS01300	SM00829	Enoylreductase
EX97_RS01350	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
EX97_RS01350	SM00387	Histidine kinase-like ATPases
EX97_RS01355	SM00448	cheY-homologous receiver domain
EX97_RS01355	SM00850	LytTr DNA-binding domain
EX97_RS01370	SM00345	helix_turn_helix gluconate operon transcriptional repressor
EX97_RS01370	SM00866	EX97_RS01370
EX97_RS01415	SM00354	helix_turn _helix lactose operon repressor
EX97_RS01450	SM00382	ATPases associated with a variety of cellular activities
EX97_RS01645	SM00382	ATPases associated with a variety of cellular activities
EX97_RS01675	SM01130	EX97_RS01675
EX97_RS01730	SM00506	Appr-1"-p processing enzyme
EX97_RS01770	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS01850	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS01860	SM00382	ATPases associated with a variety of cellular activities
EX97_RS01910	SM00470	ParB-like nuclease domain
EX97_RS01995	SM00855	Phosphoglycerate mutase family
EX97_RS02065	SM00116	Domain in cystathionine beta-synthase and other proteins.
EX97_RS02065	SM01240	EX97_RS02065
EX97_RS02265	SM00833	Cobalamin synthesis protein cobW C-terminal domain
EX97_RS02295	SM00014	Acid phosphatase homologues
EX97_RS02325	SM00382	ATPases associated with a variety of cellular activities
EX97_RS02325	SM00930	EX97_RS02325
EX97_RS02340	SM00257	Lysin motif
EX97_RS02395	SM00642	Alpha-amylase domain
EX97_RS02400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
EX97_RS02400	SM00866	EX97_RS02400
EX97_RS02415	SM00382	ATPases associated with a variety of cellular activities
EX97_RS02425	SM00278	Helix-hairpin-helix DNA-binding motif class 1
EX97_RS02425	SM00493	EX97_RS02425
EX97_RS02490	SM00465	GIY-YIG type nucleases (URI domain)
EX97_RS02515	SM00493	EX97_RS02515
EX97_RS02520	SM00650	Ribosomal RNA adenine dimethylases
EX97_RS02560	SM01400	EX97_RS02560
EX97_RS02580	SM00487	DEAD-like helicases superfamily
EX97_RS02580	SM00490	helicase superfamily c-terminal domain
EX97_RS02580	SM00982	EX97_RS02580
EX97_RS02580	SM01058	CarD-like/TRCF domain
EX97_RS02595	SM00363	S4 RNA-binding domain
EX97_RS02605	SM00316	Ribosomal protein S1-like RNA-binding domain
EX97_RS02610	SM00977	TilS substrate C-terminal domain
EX97_RS02620	SM00382	ATPases associated with a variety of cellular activities
EX97_RS02640	SM00905	Dihydroneopterin aldolase
EX97_RS02725	SM00345	helix_turn_helix gluconate operon transcriptional repressor
EX97_RS02760	SM00382	ATPases associated with a variety of cellular activities
EX97_RS02760	SM01086	C-terminal, D2-small domain, of ClpB protein
EX97_RS02770	SM00382	ATPases associated with a variety of cellular activities
EX97_RS02775	SM00670	Large family of predicted nucleotide-binding domains
EX97_RS02790	SM00840	EX97_RS02790
EX97_RS02800	SM00967	RNA 2'-O ribose methyltransferase substrate binding
EX97_RS02820	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
EX97_RS02820	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
EX97_RS02825	SM00649	Ribosomal protein L11/L12
EX97_RS02855	SM00663	RNA polymerase I subunit A N-terminus
EX97_RS02875	SM00838	Elongation factor G C-terminus
EX97_RS02875	SM00889	Elongation factor G, domain IV
EX97_RS02990	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
EX97_RS03040	SM00986	Uracil DNA glycosylase superfamily
EX97_RS03040	SM00987	UreE urease accessory protein, C-terminal domain 
EX97_RS03205	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
EX97_RS03215	SM00829	Enoylreductase
EX97_RS03230	SM00836	DALR anticodon binding domain
EX97_RS03230	SM01016	Arginyl tRNA synthetase N terminal dom
EX97_RS03235	SM00478	endonuclease III
EX97_RS03430	SM00382	ATPases associated with a variety of cellular activities
EX97_RS03435	SM00529	Helix-turn-helix diphteria tox regulatory element
EX97_RS03435	SM00899	EX97_RS03435
EX97_RS03450	SM00382	ATPases associated with a variety of cellular activities
EX97_RS03480	SM00382	ATPases associated with a variety of cellular activities
EX97_RS03500	SM00382	ATPases associated with a variety of cellular activities
EX97_RS03520	SM01120	EX97_RS03520
EX97_RS03565	SM00448	cheY-homologous receiver domain
EX97_RS03565	SM00862	Transcriptional regulatory protein, C terminal
EX97_RS03570	SM00387	Histidine kinase-like ATPases
EX97_RS03575	SM00382	ATPases associated with a variety of cellular activities
EX97_RS03595	SM00257	Lysin motif
EX97_RS03605	SM00342	helix_turn_helix, arabinose operon control protein
EX97_RS03700	SM00382	ATPases associated with a variety of cellular activities
EX97_RS03705	SM00382	ATPases associated with a variety of cellular activities
EX97_RS03710	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS03715	SM00833	Cobalamin synthesis protein cobW C-terminal domain
EX97_RS03770	SM00420	helix_turn_helix, Deoxyribose operon repressor
EX97_RS03770	SM01134	EX97_RS03770
EX97_RS03795	SM01091	Transporter associated domain
EX97_RS03810	SM00387	Histidine kinase-like ATPases
EX97_RS03810	SM00388	His Kinase A (phosphoacceptor) domain
EX97_RS03815	SM00448	cheY-homologous receiver domain
EX97_RS03815	SM00862	Transcriptional regulatory protein, C terminal
EX97_RS03870	SM00796	Allophanate hydrolase subunit 1
EX97_RS03875	SM00797	Allophanate hydrolase subunit 2
EX97_RS03890	SM00382	ATPases associated with a variety of cellular activities
EX97_RS03895	SM00341	Helicase and RNase D C-terminal
EX97_RS03895	SM00487	DEAD-like helicases superfamily
EX97_RS03895	SM00490	helicase superfamily c-terminal domain
EX97_RS03895	SM00956	EX97_RS03895
EX97_RS03900	SM00382	ATPases associated with a variety of cellular activities
EX97_RS03920	SM00046	Diacylglycerol kinase catalytic domain (presumed)
EX97_RS03980	SM00382	ATPases associated with a variety of cellular activities
EX97_RS04035	SM00267	diguanylate cyclase
EX97_RS04055	SM00487	DEAD-like helicases superfamily
EX97_RS04055	SM00490	helicase superfamily c-terminal domain
EX97_RS04070	SM00957	SecA DEAD-like domain
EX97_RS04070	SM00958	SecA preprotein cross-linking domain
EX97_RS04080	SM00937	EX97_RS04080
EX97_RS04090	SM00257	Lysin motif
EX97_RS04105	SM00487	DEAD-like helicases superfamily
EX97_RS04105	SM00490	helicase superfamily c-terminal domain
EX97_RS04130	SM00028	Tetratricopeptide repeats
EX97_RS04185	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
EX97_RS04205	SM01192	EX97_RS04205
EX97_RS04205	SM01193	EX97_RS04205
EX97_RS04225	SM00316	Ribosomal protein S1-like RNA-binding domain
EX97_RS04225	SM00357	Cold shock protein domain
EX97_RS04225	SM00955	EX97_RS04225
EX97_RS04290	SM00318	Staphylococcal nuclease homologues
EX97_RS04295	SM00357	Cold shock protein domain
EX97_RS04335	SM00855	Phosphoglycerate mutase family
EX97_RS04395	SM00493	EX97_RS04395
EX97_RS04405	SM00382	ATPases associated with a variety of cellular activities
EX97_RS04405	SM00930	EX97_RS04405
EX97_RS04440	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS04445	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS04470	SM00885	D5 N terminal like
EX97_RS04515	SM00382	ATPases associated with a variety of cellular activities
EX97_RS04580	SM00729	Elongator protein 3, MiaB family, Radical SAM
EX97_RS04725	SM01298	EX97_RS04725
EX97_RS04735	SM00316	Ribosomal protein S1-like RNA-binding domain
EX97_RS04750	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
EX97_RS04835	SM00382	ATPases associated with a variety of cellular activities
EX97_RS04835	SM01086	C-terminal, D2-small domain, of ClpB protein
EX97_RS04880	SM00825	Beta-ketoacyl synthase
EX97_RS04900	SM00382	ATPases associated with a variety of cellular activities
EX97_RS04905	SM00382	ATPases associated with a variety of cellular activities
EX97_RS04920	SM00382	ATPases associated with a variety of cellular activities
EX97_RS04925	SM00382	ATPases associated with a variety of cellular activities
EX97_RS04975	SM01118	EX97_RS04975
EX97_RS04985	SM00954	Region found in RelA / SpoT proteins
EX97_RS05000	SM00116	Domain in cystathionine beta-synthase and other proteins.
EX97_RS05000	SM00924	MgtE intracellular N domain
EX97_RS05065	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
EX97_RS05095	SM00914	EX97_RS05095
EX97_RS05135	SM00382	ATPases associated with a variety of cellular activities
EX97_RS05230	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS05240	SM00047	Lysozyme subfamily 2
EX97_RS05240	SM00644	EX97_RS05240
EX97_RS05300	SM01001	AIR carboxylase
EX97_RS05320	SM01211	EX97_RS05320
EX97_RS05345	SM00798	AICARFT/IMPCHase bienzyme
EX97_RS05345	SM00851	MGS-like domain
EX97_RS05350	SM01209	EX97_RS05350
EX97_RS05350	SM01210	EX97_RS05350
EX97_RS05360	SM00382	ATPases associated with a variety of cellular activities
EX97_RS05430	SM00849	Metallo-beta-lactamase superfamily
EX97_RS05460	SM00861	Transketolase, pyrimidine binding domain
EX97_RS05480	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS05485	SM00382	ATPases associated with a variety of cellular activities
EX97_RS05535	SM00838	Elongation factor G C-terminus
EX97_RS05560	SM00878	Biotin carboxylase C-terminal domain
EX97_RS05640	SM00725	NEAr Transporter domain
EX97_RS05645	SM00725	NEAr Transporter domain
EX97_RS05650	SM00725	NEAr Transporter domain
EX97_RS05685	SM00967	RNA 2'-O ribose methyltransferase substrate binding
EX97_RS05695	SM00873	B3/4 domain
EX97_RS05695	SM00874	tRNA synthetase B5 domain
EX97_RS05695	SM00896	Ferredoxin-fold anticodon binding domain
EX97_RS05715	SM00278	Helix-hairpin-helix DNA-binding motif class 1
EX97_RS05715	SM00481	DNA polymerase alpha chain like domain
EX97_RS05715	SM00483	DNA polymerase X family
EX97_RS05720	SM00463	Small MutS-related domain
EX97_RS05720	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
EX97_RS05720	SM00534	ATPase domain of DNA mismatch repair MUTS family
EX97_RS05735	SM00465	GIY-YIG type nucleases (URI domain)
EX97_RS05935	SM00740	EX97_RS05935
EX97_RS05955	SM00842	Cell division protein FtsA
EX97_RS05960	SM00864	Tubulin/FtsZ family, GTPase domain
EX97_RS05960	SM00865	Tubulin/FtsZ family, C-terminal domain
EX97_RS05985	SM00363	S4 RNA-binding domain
EX97_RS06015	SM00363	S4 RNA-binding domain
EX97_RS06040	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
EX97_RS06045	SM00851	MGS-like domain
EX97_RS06045	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
EX97_RS06045	SM01209	EX97_RS06045
EX97_RS06050	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
EX97_RS06075	SM00072	Guanylate kinase homologues.
EX97_RS06080	SM01409	EX97_RS06080
EX97_RS06090	SM00487	DEAD-like helicases superfamily
EX97_RS06090	SM00490	helicase superfamily c-terminal domain
EX97_RS06125	SM00331	Sigma factor PP2C-like phosphatases
EX97_RS06125	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
EX97_RS06130	SM00220	Serine/Threonine protein kinases, catalytic domain
EX97_RS06130	SM00740	EX97_RS06130
EX97_RS06145	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
EX97_RS06160	SM01120	EX97_RS06160
EX97_RS06160	SM01121	EX97_RS06160
EX97_RS06165	SM00487	DEAD-like helicases superfamily
EX97_RS06165	SM00490	helicase superfamily c-terminal domain
EX97_RS06180	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
EX97_RS06185	SM00822	EX97_RS06185
EX97_RS06200	SM00358	Double-stranded RNA binding motif
EX97_RS06200	SM00535	Ribonuclease III family
EX97_RS06205	SM00968	SMC proteins Flexible Hinge Domain
EX97_RS06210	SM00382	ATPases associated with a variety of cellular activities
EX97_RS06210	SM00962	SRP54-type protein, GTPase domain
EX97_RS06210	SM00963	SRP54-type protein, helical bundle domain
EX97_RS06220	SM00382	ATPases associated with a variety of cellular activities
EX97_RS06220	SM00962	SRP54-type protein, GTPase domain
EX97_RS06220	SM00963	SRP54-type protein, helical bundle domain
EX97_RS06270	SM00881	CoA binding domain
EX97_RS06275	SM00257	Lysin motif
EX97_RS06290	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
EX97_RS06290	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
EX97_RS06290	SM00493	EX97_RS06290
EX97_RS06310	SM00382	ATPases associated with a variety of cellular activities
EX97_RS06310	SM01086	C-terminal, D2-small domain, of ClpB protein
EX97_RS06370	SM00479	EX97_RS06370
EX97_RS06370	SM00481	DNA polymerase alpha chain like domain
EX97_RS06380	SM00316	Ribosomal protein S1-like RNA-binding domain
EX97_RS06380	SM00322	K homology RNA-binding domain
EX97_RS06410	SM00904	Riboflavin kinase
EX97_RS06415	SM01387	EX97_RS06415
EX97_RS06420	SM00316	Ribosomal protein S1-like RNA-binding domain
EX97_RS06420	SM00322	K homology RNA-binding domain
EX97_RS06425	SM00849	Metallo-beta-lactamase superfamily
EX97_RS06430	SM00382	ATPases associated with a variety of cellular activities
EX97_RS06430	SM00843	EX97_RS06430
EX97_RS06435	SM00345	helix_turn_helix gluconate operon transcriptional repressor
EX97_RS06435	SM00866	EX97_RS06435
EX97_RS06460	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS06470	SM00852	Probable molybdopterin binding domain
EX97_RS06475	SM00382	ATPases associated with a variety of cellular activities
EX97_RS06480	SM00322	K homology RNA-binding domain
EX97_RS06480	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
EX97_RS06510	SM00729	Elongator protein 3, MiaB family, Radical SAM
EX97_RS06525	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
EX97_RS06525	SM00534	ATPase domain of DNA mismatch repair MUTS family
EX97_RS06530	SM00853	MutL C terminal dimerisation domain
EX97_RS06530	SM01340	EX97_RS06530
EX97_RS06585	SM00422	helix_turn_helix, mercury resistance
EX97_RS06590	SM01230	EX97_RS06590
EX97_RS06700	SM00155	Phospholipase D. Active site motifs.
EX97_RS06705	SM00382	ATPases associated with a variety of cellular activities
EX97_RS06720	SM00421	helix_turn_helix, Lux Regulon
EX97_RS06720	SM00448	cheY-homologous receiver domain
EX97_RS06730	SM00318	Staphylococcal nuclease homologues
EX97_RS06785	SM01060	EX97_RS06785
EX97_RS06800	SM01240	EX97_RS06800
EX97_RS06830	SM00861	Transketolase, pyrimidine binding domain
EX97_RS06885	SM01207	EX97_RS06885
EX97_RS06890	SM00387	Histidine kinase-like ATPases
EX97_RS06890	SM00433	TopoisomeraseII
EX97_RS06895	SM00434	DNA Topoisomerase IV
EX97_RS06910	SM01061	CAT RNA binding domain
EX97_RS07015	SM00382	ATPases associated with a variety of cellular activities
EX97_RS07020	SM00382	ATPases associated with a variety of cellular activities
EX97_RS07055	SM00382	ATPases associated with a variety of cellular activities
EX97_RS07090	SM00382	ATPases associated with a variety of cellular activities
EX97_RS07100	SM00859	Semialdehyde dehydrogenase, NAD binding domain
EX97_RS07105	SM01130	EX97_RS07105
EX97_RS07125	SM01005	Alanine racemase, C-terminal domain
EX97_RS07140	SM00357	Cold shock protein domain
EX97_RS07185	SM00327	von Willebrand factor (vWF) type A domain
EX97_RS07210	SM00861	Transketolase, pyrimidine binding domain
EX97_RS07215	SM00387	Histidine kinase-like ATPases
EX97_RS07215	SM00388	His Kinase A (phosphoacceptor) domain
EX97_RS07220	SM00448	cheY-homologous receiver domain
EX97_RS07220	SM00862	Transcriptional regulatory protein, C terminal
EX97_RS07235	SM01321	EX97_RS07235
EX97_RS07240	SM00014	Acid phosphatase homologues
EX97_RS07255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
EX97_RS07255	SM00245	tail specific protease
EX97_RS07305	SM00567	E-Z type HEAT repeats
EX97_RS07305	SM00932	Scaffold protein Nfu/NifU N terminal
EX97_RS07310	SM00932	Scaffold protein Nfu/NifU N terminal
EX97_RS07340	SM00844	GA module
EX97_RS07360	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
EX97_RS07360	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
EX97_RS07365	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
EX97_RS07365	SM00475	5'-3' exonuclease
EX97_RS07390	SM00981	EX97_RS07390
EX97_RS07430	SM00478	endonuclease III
EX97_RS07430	SM00525	EX97_RS07430
EX97_RS07445	SM00479	EX97_RS07445
EX97_RS07445	SM00491	EX97_RS07445
EX97_RS07480	SM00914	EX97_RS07480
EX97_RS07485	SM00028	Tetratricopeptide repeats
EX97_RS07510	SM00562	EX97_RS07510
EX97_RS07535	SM00411	bacterial (prokaryotic) histone like domain
EX97_RS07550	SM00316	Ribosomal protein S1-like RNA-binding domain
EX97_RS07570	SM00870	EX97_RS07570
EX97_RS07585	SM00257	Lysin motif
EX97_RS07590	SM00487	DEAD-like helicases superfamily
EX97_RS07590	SM00490	helicase superfamily c-terminal domain
EX97_RS07650	SM00287	Bacterial SH3 domain homologues
EX97_RS07650	SM00646	EX97_RS07650
EX97_RS07715	SM00635	Bacterial Ig-like domain 2
EX97_RS07770	SM00507	HNH nucleases
EX97_RS07780	SM00487	DEAD-like helicases superfamily
EX97_RS07785	SM00990	EX97_RS07785
EX97_RS07865	SM00482	DNA polymerase A domain
EX97_RS07920	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS07925	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS07970	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
EX97_RS07970	SM00387	Histidine kinase-like ATPases
EX97_RS07970	SM00388	His Kinase A (phosphoacceptor) domain
EX97_RS07975	SM00448	cheY-homologous receiver domain
EX97_RS07975	SM00862	Transcriptional regulatory protein, C terminal
EX97_RS07980	SM00363	S4 RNA-binding domain
EX97_RS08045	SM00342	helix_turn_helix, arabinose operon control protein
EX97_RS08045	SM00871	Bacterial transcription activator, effector binding domain
EX97_RS08050	SM00642	Alpha-amylase domain
EX97_RS08055	SM00354	helix_turn _helix lactose operon repressor
EX97_RS08070	SM01350	EX97_RS08070
EX97_RS08100	SM00861	Transketolase, pyrimidine binding domain
EX97_RS08150	SM00878	Biotin carboxylase C-terminal domain
EX97_RS08160	SM00841	Elongation factor P, C-terminal
EX97_RS08160	SM01185	EX97_RS08160
EX97_RS08185	SM00450	Rhodanese Homology Domain
EX97_RS08245	SM00849	Metallo-beta-lactamase superfamily
EX97_RS08300	SM00382	ATPases associated with a variety of cellular activities
EX97_RS08305	SM00518	AP endonuclease family 2
EX97_RS08310	SM00487	DEAD-like helicases superfamily
EX97_RS08310	SM00490	helicase superfamily c-terminal domain
EX97_RS08330	SM00400	zinc finger
EX97_RS08330	SM00493	EX97_RS08330
EX97_RS08340	SM00116	Domain in cystathionine beta-synthase and other proteins.
EX97_RS08400	SM00729	Elongator protein 3, MiaB family, Radical SAM
EX97_RS08415	SM00271	DnaJ molecular chaperone homology domain
EX97_RS08435	SM00729	Elongator protein 3, MiaB family, Radical SAM
EX97_RS08445	SM00838	Elongation factor G C-terminus
EX97_RS08460	SM00849	Metallo-beta-lactamase superfamily
EX97_RS08470	SM00278	Helix-hairpin-helix DNA-binding motif class 1
EX97_RS08485	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
EX97_RS08495	SM01103	EX97_RS08495
EX97_RS08550	SM00878	Biotin carboxylase C-terminal domain
EX97_RS08560	SM00797	Allophanate hydrolase subunit 2
EX97_RS08565	SM00796	Allophanate hydrolase subunit 1
EX97_RS08600	SM00732	Likely ribonuclease with RNase H fold.
EX97_RS08610	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
EX97_RS08615	SM00382	ATPases associated with a variety of cellular activities
EX97_RS08620	SM00028	Tetratricopeptide repeats
EX97_RS08655	SM00382	ATPases associated with a variety of cellular activities
EX97_RS08680	SM00287	Bacterial SH3 domain homologues
EX97_RS08680	SM00646	EX97_RS08680
EX97_RS08690	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
EX97_RS08690	SM00954	Region found in RelA / SpoT proteins
EX97_RS08710	SM01323	EX97_RS08710
EX97_RS08725	SM00382	ATPases associated with a variety of cellular activities
EX97_RS08730	SM00278	Helix-hairpin-helix DNA-binding motif class 1
EX97_RS08830	SM01004	Delta-aminolevulinic acid dehydratase
EX97_RS08860	SM00382	ATPases associated with a variety of cellular activities
EX97_RS08860	SM00994	ClpX C4-type zinc finger
EX97_RS08860	SM01086	C-terminal, D2-small domain, of ClpB protein
EX97_RS08910	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
EX97_RS08935	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
EX97_RS08945	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
EX97_RS08945	SM01232	EX97_RS08945
EX97_RS08950	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
EX97_RS08950	SM00474	3'-5' exonuclease
EX97_RS08950	SM00475	5'-3' exonuclease
EX97_RS08950	SM00482	DNA polymerase A domain
EX97_RS08960	SM00387	Histidine kinase-like ATPases
EX97_RS08960	SM00388	His Kinase A (phosphoacceptor) domain
EX97_RS08965	SM00448	cheY-homologous receiver domain
EX97_RS08965	SM00862	Transcriptional regulatory protein, C terminal
EX97_RS08975	SM01329	EX97_RS08975
EX97_RS09020	SM00919	Malic enzyme, NAD binding domain
EX97_RS09020	SM01274	EX97_RS09020
EX97_RS09025	SM00481	DNA polymerase alpha chain like domain
EX97_RS09035	SM00116	Domain in cystathionine beta-synthase and other proteins.
EX97_RS09045	SM00849	Metallo-beta-lactamase superfamily
EX97_RS09060	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
EX97_RS09060	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
EX97_RS09090	SM00981	EX97_RS09090
EX97_RS09110	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
EX97_RS09115	SM00363	S4 RNA-binding domain
EX97_RS09115	SM01390	EX97_RS09115
EX97_RS09160	SM00563	Phosphate acyltransferases
EX97_RS09165	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
EX97_RS09170	SM00363	S4 RNA-binding domain
EX97_RS09185	SM00725	NEAr Transporter domain
EX97_RS09210	SM00354	helix_turn _helix lactose operon repressor
EX97_RS09220	SM00830	Chorismate mutase type II
EX97_RS09245	SM00843	EX97_RS09245
EX97_RS09275	SM00849	Metallo-beta-lactamase superfamily
EX97_RS09305	SM00363	S4 RNA-binding domain
EX97_RS09325	SM00450	Rhodanese Homology Domain
EX97_RS09340	SM00729	Elongator protein 3, MiaB family, Radical SAM
EX97_RS09350	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS09405	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
EX97_RS09415	SM00226	Low molecular weight phosphatase family
EX97_RS09420	SM00047	Lysozyme subfamily 2
EX97_RS09515	SM01234	EX97_RS09515
EX97_RS09535	SM00894	Excalibur calcium-binding domain
EX97_RS09670	SM00382	ATPases associated with a variety of cellular activities
EX97_RS09685	SM01260	EX97_RS09685
EX97_RS09805	SM00382	ATPases associated with a variety of cellular activities
EX97_RS09830	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
EX97_RS09860	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS09865	SM00421	helix_turn_helix, Lux Regulon
EX97_RS09865	SM00448	cheY-homologous receiver domain
EX97_RS09915	SM00382	ATPases associated with a variety of cellular activities
EX97_RS09920	SM00062	Bacterial periplasmic substrate-binding proteins
EX97_RS10115	SM00382	ATPases associated with a variety of cellular activities
EX97_RS10125	SM00478	endonuclease III
EX97_RS10195	SM00226	Low molecular weight phosphatase family
EX97_RS10210	SM00421	helix_turn_helix, Lux Regulon
EX97_RS10210	SM00448	cheY-homologous receiver domain
EX97_RS10215	SM00387	Histidine kinase-like ATPases
EX97_RS10275	SM00479	EX97_RS10275
EX97_RS10295	SM00046	Diacylglycerol kinase catalytic domain (presumed)
EX97_RS10305	SM00845	GatB domain
EX97_RS10330	SM00278	Helix-hairpin-helix DNA-binding motif class 1
EX97_RS10330	SM00292	breast cancer carboxy-terminal domain
EX97_RS10330	SM00532	Ligase N family
EX97_RS10350	SM00998	Adenylosuccinate lyase C-terminus
EX97_RS10405	SM00710	Parallel beta-helix repeats
EX97_RS10415	SM01131	EX97_RS10415
EX97_RS10475	SM00382	ATPases associated with a variety of cellular activities
EX97_RS10485	SM00382	ATPases associated with a variety of cellular activities
EX97_RS10490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
EX97_RS10550	SM00287	Bacterial SH3 domain homologues
EX97_RS10675	SM00507	HNH nucleases
EX97_RS10815	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS10825	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS10830	SM00479	EX97_RS10830
EX97_RS10920	SM00883	Chaperonin 10 Kd subunit
EX97_RS10950	SM00793	Accessory gene regulator B
EX97_RS10955	SM00794	Staphylococcal AgrD protein
EX97_RS10965	SM00448	cheY-homologous receiver domain
EX97_RS10965	SM00850	LytTr DNA-binding domain
EX97_RS10980	SM00640	Glycosyl hydrolases family 32
EX97_RS10985	SM00354	helix_turn _helix lactose operon repressor
EX97_RS11005	SM00881	CoA binding domain
EX97_RS11010	SM00382	ATPases associated with a variety of cellular activities
EX97_RS11020	SM00534	ATPase domain of DNA mismatch repair MUTS family
EX97_RS11070	SM00917	LeuA allosteric (dimerisation) domain
EX97_RS11075	SM01329	EX97_RS11075
EX97_RS11125	SM00731	SprT homologues.
EX97_RS11130	SM00316	Ribosomal protein S1-like RNA-binding domain
EX97_RS11130	SM00732	Likely ribonuclease with RNase H fold.
EX97_RS11150	SM00331	Sigma factor PP2C-like phosphatases
EX97_RS11150	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
EX97_RS11170	SM01005	Alanine racemase, C-terminal domain
EX97_RS11215	SM00387	Histidine kinase-like ATPases
EX97_RS11215	SM00388	His Kinase A (phosphoacceptor) domain
EX97_RS11220	SM00448	cheY-homologous receiver domain
EX97_RS11220	SM00862	Transcriptional regulatory protein, C terminal
EX97_RS11225	SM00487	DEAD-like helicases superfamily
EX97_RS11225	SM00490	helicase superfamily c-terminal domain
EX97_RS11260	SM00155	Phospholipase D. Active site motifs.
EX97_RS11265	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
EX97_RS11350	SM00382	ATPases associated with a variety of cellular activities
EX97_RS11410	SM00226	Low molecular weight phosphatase family
EX97_RS11425	SM00937	EX97_RS11425
EX97_RS11440	SM00357	Cold shock protein domain
EX97_RS11440	SM00382	ATPases associated with a variety of cellular activities
EX97_RS11440	SM00959	Rho termination factor, N-terminal domain
EX97_RS11520	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
EX97_RS11530	SM01133	EX97_RS11530
EX97_RS11570	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
EX97_RS11610	SM00382	ATPases associated with a variety of cellular activities
EX97_RS11840	SM00829	Enoylreductase
EX97_RS11845	SM00829	Enoylreductase
EX97_RS11870	SM01133	EX97_RS11870
EX97_RS11890	SM00420	helix_turn_helix, Deoxyribose operon repressor
EX97_RS11890	SM01134	EX97_RS11890
EX97_RS11920	SM00422	helix_turn_helix, mercury resistance
EX97_RS11975	SM00382	ATPases associated with a variety of cellular activities
EX97_RS12020	SM00382	ATPases associated with a variety of cellular activities
EX97_RS12025	SM00382	ATPases associated with a variety of cellular activities
EX97_RS12035	SM00662	RNA polymerases D
EX97_RS12055	SM00316	Ribosomal protein S1-like RNA-binding domain
EX97_RS12110	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
EX97_RS12115	SM01374	EX97_RS12115
EX97_RS12135	SM00322	K homology RNA-binding domain
EX97_RS12150	SM01382	EX97_RS12150
EX97_RS12150	SM01383	EX97_RS12150
EX97_RS12170	SM01403	EX97_RS12170
EX97_RS12185	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
EX97_RS12185	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
EX97_RS12185	SM00493	EX97_RS12185
EX97_RS12245	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS12275	SM00729	Elongator protein 3, MiaB family, Radical SAM
EX97_RS12300	SM00852	Probable molybdopterin binding domain
EX97_RS12310	SM00852	Probable molybdopterin binding domain
EX97_RS12320	SM00382	ATPases associated with a variety of cellular activities
EX97_RS12385	SM00988	UreE urease accessory protein, N-terminal domain
EX97_RS12425	SM00342	helix_turn_helix, arabinose operon control protein
EX97_RS12475	SM00047	Lysozyme subfamily 2
EX97_RS12490	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
EX97_RS12490	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
EX97_RS12505	SM00420	helix_turn_helix, Deoxyribose operon repressor
EX97_RS12660	SM00382	ATPases associated with a variety of cellular activities
EX97_RS12745	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS12760	SM00382	ATPases associated with a variety of cellular activities
EX97_RS12770	SM00448	cheY-homologous receiver domain
EX97_RS12770	SM00862	Transcriptional regulatory protein, C terminal
EX97_RS12775	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
EX97_RS12775	SM00387	Histidine kinase-like ATPases
EX97_RS12775	SM00388	His Kinase A (phosphoacceptor) domain
EX97_RS12780	SM00850	LytTr DNA-binding domain
EX97_RS12815	SM00829	Enoylreductase
EX97_RS12870	SM00342	helix_turn_helix, arabinose operon control protein
EX97_RS12895	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS12915	SM00422	helix_turn_helix, mercury resistance
EX97_RS12920	SM00421	helix_turn_helix, Lux Regulon
EX97_RS12920	SM00448	cheY-homologous receiver domain
EX97_RS12925	SM00387	Histidine kinase-like ATPases
EX97_RS12950	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
EX97_RS13030	SM00382	ATPases associated with a variety of cellular activities
EX97_RS13040	SM00062	Bacterial periplasmic substrate-binding proteins
EX97_RS13040	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
EX97_RS13060	SM00855	Phosphoglycerate mutase family
EX97_RS13115	SM00729	Elongator protein 3, MiaB family, Radical SAM
EX97_RS13115	SM00876	Biotin and Thiamin Synthesis associated domain
EX97_RS13140	SM00382	ATPases associated with a variety of cellular activities
EX97_RS13145	SM00382	ATPases associated with a variety of cellular activities
EX97_RS13180	SM00871	Bacterial transcription activator, effector binding domain
EX97_RS13260	SM00116	Domain in cystathionine beta-synthase and other proteins.
EX97_RS13260	SM00382	ATPases associated with a variety of cellular activities
EX97_RS13300	SM00382	ATPases associated with a variety of cellular activities
EX97_RS13345	SM00382	ATPases associated with a variety of cellular activities
EX97_RS13350	SM00382	ATPases associated with a variety of cellular activities
EX97_RS13480	SM00487	DEAD-like helicases superfamily
EX97_RS13480	SM00490	helicase superfamily c-terminal domain
EX97_RS13515	SM01208	EX97_RS13515
EX97_RS13570	SM00345	helix_turn_helix gluconate operon transcriptional repressor
EX97_RS13570	SM00895	EX97_RS13570
EX97_RS13575	SM00422	helix_turn_helix, mercury resistance
EX97_RS13580	SM00954	Region found in RelA / SpoT proteins
EX97_RS13615	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS13620	SM00382	ATPases associated with a variety of cellular activities
EX97_RS13655	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS13685	SM00382	ATPases associated with a variety of cellular activities
EX97_RS13820	SM00382	ATPases associated with a variety of cellular activities
EX97_RS13820	SM01086	C-terminal, D2-small domain, of ClpB protein
EX97_RS13835	SM00899	EX97_RS13835
EX97_RS13860	SM01266	EX97_RS13860
EX97_RS14060	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
EX97_RS14245	SM00382	ATPases associated with a variety of cellular activities
EX97_RS14250	SM00387	Histidine kinase-like ATPases
EX97_RS14255	SM00448	cheY-homologous receiver domain
EX97_RS14255	SM00862	Transcriptional regulatory protein, C terminal
EX97_RS14270	SM00098	Alkaline phosphatase homologues
EX97_RS14275	SM00347	helix_turn_helix multiple antibiotic resistance protein
EX97_RS14360	SM00047	Lysozyme subfamily 2
EX97_RS14385	SM00957	SecA DEAD-like domain
EX97_RS14385	SM00958	SecA preprotein cross-linking domain
EX97_RS14415	SM00903	Flavin reductase like domain
EX97_RS14435	SM00903	Flavin reductase like domain
EX97_RS14560	SM00382	ATPases associated with a variety of cellular activities
EX97_RS14575	SM00867	YceI-like domain 
EX97_RS14585	SM00450	Rhodanese Homology Domain
EX97_RS14640	SM00382	ATPases associated with a variety of cellular activities
EX97_RS14670	SM00357	Cold shock protein domain
EX97_RS14675	SM00530	Helix-turn-helix XRE-family like proteins 
EX97_RS14690	SM00470	ParB-like nuclease domain
EX97_RS14700	SM01228	EX97_RS14700
