AYM25_RS00005 SM00382 ATPases associated with a variety of cellular activities AYM25_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AYM25_RS00010 SM00480 DNA polymerase III beta subunit AYM25_RS00025 SM00387 Histidine kinase-like ATPases AYM25_RS00025 SM00433 TopoisomeraseII AYM25_RS00030 SM00434 DNA Topoisomerase IV AYM25_RS00075 SM00267 diguanylate cyclase AYM25_RS00095 SM00788 Adenylosuccinate synthetase AYM25_RS00110 SM00448 cheY-homologous receiver domain AYM25_RS00110 SM00862 Transcriptional regulatory protein, C terminal AYM25_RS00115 SM00091 PAS domain AYM25_RS00115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYM25_RS00115 SM00387 Histidine kinase-like ATPases AYM25_RS00115 SM00388 His Kinase A (phosphoacceptor) domain AYM25_RS00130 SM00849 Metallo-beta-lactamase superfamily AYM25_RS00210 SM00857 Resolvase, N terminal domain AYM25_RS00215 SM00857 Resolvase, N terminal domain AYM25_RS00295 SM00829 Enoylreductase AYM25_RS00405 SM00382 ATPases associated with a variety of cellular activities AYM25_RS00410 SM00382 ATPases associated with a variety of cellular activities AYM25_RS00460 SM00450 Rhodanese Homology Domain AYM25_RS00465 SM00450 Rhodanese Homology Domain AYM25_RS00465 SM00849 Metallo-beta-lactamase superfamily AYM25_RS00545 SM00148 Phospholipase C, catalytic domain (part); domain X AYM25_RS00570 SM00342 helix_turn_helix, arabinose operon control protein AYM25_RS00600 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM25_RS00615 SM00257 Lysin motif AYM25_RS00625 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS00685 SM00470 ParB-like nuclease domain AYM25_RS00705 SM00822 AYM25_RS00705 AYM25_RS00750 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM25_RS00765 SM01133 AYM25_RS00765 AYM25_RS00785 SM00382 ATPases associated with a variety of cellular activities AYM25_RS00790 SM00062 Bacterial periplasmic substrate-binding proteins AYM25_RS00920 SM00984 UDP binding domain AYM25_RS00960 SM00382 ATPases associated with a variety of cellular activities AYM25_RS01020 SM00859 Semialdehyde dehydrogenase, NAD binding domain AYM25_RS01080 SM00487 DEAD-like helicases superfamily AYM25_RS01100 SM00382 ATPases associated with a variety of cellular activities AYM25_RS01140 SM00382 ATPases associated with a variety of cellular activities AYM25_RS01185 SM00342 helix_turn_helix, arabinose operon control protein AYM25_RS01185 SM00448 cheY-homologous receiver domain AYM25_RS01255 SM00882 Coenzyme A transferase AYM25_RS01335 SM00829 Enoylreductase AYM25_RS01345 SM00829 Enoylreductase AYM25_RS01395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AYM25_RS01395 SM00387 Histidine kinase-like ATPases AYM25_RS01400 SM00448 cheY-homologous receiver domain AYM25_RS01400 SM00850 LytTr DNA-binding domain AYM25_RS01415 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM25_RS01415 SM00866 AYM25_RS01415 AYM25_RS01465 SM00354 helix_turn _helix lactose operon repressor AYM25_RS01500 SM00382 ATPases associated with a variety of cellular activities AYM25_RS01700 SM00382 ATPases associated with a variety of cellular activities AYM25_RS01735 SM01130 AYM25_RS01735 AYM25_RS01790 SM00506 Appr-1"-p processing enzyme AYM25_RS01835 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS01915 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS01925 SM00382 ATPases associated with a variety of cellular activities AYM25_RS01975 SM00470 ParB-like nuclease domain AYM25_RS02065 SM00855 Phosphoglycerate mutase family AYM25_RS02140 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM25_RS02140 SM01240 AYM25_RS02140 AYM25_RS02350 SM00833 Cobalamin synthesis protein cobW C-terminal domain AYM25_RS02385 SM00014 Acid phosphatase homologues AYM25_RS02415 SM00382 ATPases associated with a variety of cellular activities AYM25_RS02415 SM00930 AYM25_RS02415 AYM25_RS02430 SM00257 Lysin motif AYM25_RS02485 SM00642 Alpha-amylase domain AYM25_RS02490 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM25_RS02490 SM00866 AYM25_RS02490 AYM25_RS02510 SM00382 ATPases associated with a variety of cellular activities AYM25_RS02520 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM25_RS02520 SM00493 AYM25_RS02520 AYM25_RS02585 SM00465 GIY-YIG type nucleases (URI domain) AYM25_RS02605 SM00493 AYM25_RS02605 AYM25_RS02610 SM00650 Ribosomal RNA adenine dimethylases AYM25_RS02650 SM01400 AYM25_RS02650 AYM25_RS02670 SM00487 DEAD-like helicases superfamily AYM25_RS02670 SM00490 helicase superfamily c-terminal domain AYM25_RS02670 SM00982 AYM25_RS02670 AYM25_RS02670 SM01058 CarD-like/TRCF domain AYM25_RS02685 SM00363 S4 RNA-binding domain AYM25_RS02695 SM00316 Ribosomal protein S1-like RNA-binding domain AYM25_RS02700 SM00977 TilS substrate C-terminal domain AYM25_RS02710 SM00382 ATPases associated with a variety of cellular activities AYM25_RS02730 SM00905 Dihydroneopterin aldolase AYM25_RS02815 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM25_RS02850 SM00382 ATPases associated with a variety of cellular activities AYM25_RS02850 SM01086 C-terminal, D2-small domain, of ClpB protein AYM25_RS02855 SM00382 ATPases associated with a variety of cellular activities AYM25_RS02860 SM00670 Large family of predicted nucleotide-binding domains AYM25_RS02880 SM00840 AYM25_RS02880 AYM25_RS02885 SM00535 Ribonuclease III family AYM25_RS02890 SM00967 RNA 2'-O ribose methyltransferase substrate binding AYM25_RS02915 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AYM25_RS02915 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AYM25_RS02920 SM00649 Ribosomal protein L11/L12 AYM25_RS02950 SM00663 RNA polymerase I subunit A N-terminus AYM25_RS02970 SM00838 Elongation factor G C-terminus AYM25_RS02970 SM00889 Elongation factor G, domain IV AYM25_RS03095 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AYM25_RS03150 SM00986 Uracil DNA glycosylase superfamily AYM25_RS03150 SM00987 UreE urease accessory protein, C-terminal domain AYM25_RS03330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM25_RS03340 SM00829 Enoylreductase AYM25_RS03355 SM00836 DALR anticodon binding domain AYM25_RS03355 SM01016 Arginyl tRNA synthetase N terminal dom AYM25_RS03370 SM00478 endonuclease III AYM25_RS03565 SM00382 ATPases associated with a variety of cellular activities AYM25_RS03570 SM00529 Helix-turn-helix diphteria tox regulatory element AYM25_RS03570 SM00899 AYM25_RS03570 AYM25_RS03585 SM00382 ATPases associated with a variety of cellular activities AYM25_RS03615 SM00382 ATPases associated with a variety of cellular activities AYM25_RS03635 SM00382 ATPases associated with a variety of cellular activities AYM25_RS03655 SM01120 AYM25_RS03655 AYM25_RS03700 SM00448 cheY-homologous receiver domain AYM25_RS03700 SM00862 Transcriptional regulatory protein, C terminal AYM25_RS03705 SM00387 Histidine kinase-like ATPases AYM25_RS03710 SM00382 ATPases associated with a variety of cellular activities AYM25_RS03730 SM00257 Lysin motif AYM25_RS03835 SM00382 ATPases associated with a variety of cellular activities AYM25_RS03840 SM00382 ATPases associated with a variety of cellular activities AYM25_RS03845 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS03850 SM00833 Cobalamin synthesis protein cobW C-terminal domain AYM25_RS03905 SM00420 helix_turn_helix, Deoxyribose operon repressor AYM25_RS03905 SM01134 AYM25_RS03905 AYM25_RS03925 SM01091 Transporter associated domain AYM25_RS03940 SM00387 Histidine kinase-like ATPases AYM25_RS03940 SM00388 His Kinase A (phosphoacceptor) domain AYM25_RS03945 SM00448 cheY-homologous receiver domain AYM25_RS03945 SM00862 Transcriptional regulatory protein, C terminal AYM25_RS04000 SM00796 Allophanate hydrolase subunit 1 AYM25_RS04005 SM00797 Allophanate hydrolase subunit 2 AYM25_RS04015 SM00382 ATPases associated with a variety of cellular activities AYM25_RS04020 SM00341 Helicase and RNase D C-terminal AYM25_RS04020 SM00487 DEAD-like helicases superfamily AYM25_RS04020 SM00490 helicase superfamily c-terminal domain AYM25_RS04020 SM00956 AYM25_RS04020 AYM25_RS04025 SM00382 ATPases associated with a variety of cellular activities AYM25_RS04055 SM00046 Diacylglycerol kinase catalytic domain (presumed) AYM25_RS04130 SM00382 ATPases associated with a variety of cellular activities AYM25_RS04190 SM00267 diguanylate cyclase AYM25_RS04210 SM00487 DEAD-like helicases superfamily AYM25_RS04210 SM00490 helicase superfamily c-terminal domain AYM25_RS04225 SM00957 SecA DEAD-like domain AYM25_RS04225 SM00958 SecA preprotein cross-linking domain AYM25_RS04235 SM00937 AYM25_RS04235 AYM25_RS04245 SM00257 Lysin motif AYM25_RS04260 SM00487 DEAD-like helicases superfamily AYM25_RS04260 SM00490 helicase superfamily c-terminal domain AYM25_RS04290 SM00028 Tetratricopeptide repeats AYM25_RS04360 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYM25_RS04380 SM01192 AYM25_RS04380 AYM25_RS04380 SM01193 AYM25_RS04380 AYM25_RS04400 SM00316 Ribosomal protein S1-like RNA-binding domain AYM25_RS04400 SM00357 Cold shock protein domain AYM25_RS04400 SM00955 AYM25_RS04400 AYM25_RS04470 SM00318 Staphylococcal nuclease homologues AYM25_RS04475 SM00357 Cold shock protein domain AYM25_RS04515 SM00855 Phosphoglycerate mutase family AYM25_RS04575 SM00493 AYM25_RS04575 AYM25_RS04585 SM00382 ATPases associated with a variety of cellular activities AYM25_RS04585 SM00930 AYM25_RS04585 AYM25_RS04620 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS04625 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS04655 SM00885 D5 N terminal like AYM25_RS04715 SM00382 ATPases associated with a variety of cellular activities AYM25_RS04785 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM25_RS04930 SM01298 AYM25_RS04930 AYM25_RS04940 SM00316 Ribosomal protein S1-like RNA-binding domain AYM25_RS04955 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYM25_RS05045 SM00382 ATPases associated with a variety of cellular activities AYM25_RS05045 SM01086 C-terminal, D2-small domain, of ClpB protein AYM25_RS05090 SM00825 Beta-ketoacyl synthase AYM25_RS05110 SM00382 ATPases associated with a variety of cellular activities AYM25_RS05115 SM00382 ATPases associated with a variety of cellular activities AYM25_RS05130 SM00382 ATPases associated with a variety of cellular activities AYM25_RS05135 SM00382 ATPases associated with a variety of cellular activities AYM25_RS05190 SM01118 AYM25_RS05190 AYM25_RS05200 SM00954 Region found in RelA / SpoT proteins AYM25_RS05215 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM25_RS05215 SM00924 MgtE intracellular N domain AYM25_RS05280 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYM25_RS05310 SM00914 AYM25_RS05310 AYM25_RS05355 SM00382 ATPases associated with a variety of cellular activities AYM25_RS05455 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS05465 SM00047 Lysozyme subfamily 2 AYM25_RS05465 SM00644 AYM25_RS05465 AYM25_RS05530 SM01001 AIR carboxylase AYM25_RS05550 SM01211 AYM25_RS05550 AYM25_RS05575 SM00798 AICARFT/IMPCHase bienzyme AYM25_RS05575 SM00851 MGS-like domain AYM25_RS05580 SM01209 AYM25_RS05580 AYM25_RS05580 SM01210 AYM25_RS05580 AYM25_RS05590 SM00382 ATPases associated with a variety of cellular activities AYM25_RS05665 SM00849 Metallo-beta-lactamase superfamily AYM25_RS05695 SM00861 Transketolase, pyrimidine binding domain AYM25_RS05715 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS05720 SM00382 ATPases associated with a variety of cellular activities AYM25_RS05770 SM00838 Elongation factor G C-terminus AYM25_RS05795 SM00878 Biotin carboxylase C-terminal domain AYM25_RS05875 SM00725 NEAr Transporter domain AYM25_RS05880 SM00725 NEAr Transporter domain AYM25_RS05885 SM00725 NEAr Transporter domain AYM25_RS05920 SM00967 RNA 2'-O ribose methyltransferase substrate binding AYM25_RS05930 SM00873 B3/4 domain AYM25_RS05930 SM00874 tRNA synthetase B5 domain AYM25_RS05930 SM00896 Ferredoxin-fold anticodon binding domain AYM25_RS05955 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM25_RS05955 SM00481 DNA polymerase alpha chain like domain AYM25_RS05955 SM00483 DNA polymerase X family AYM25_RS05960 SM00463 Small MutS-related domain AYM25_RS05960 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AYM25_RS05960 SM00534 ATPase domain of DNA mismatch repair MUTS family AYM25_RS05975 SM00465 GIY-YIG type nucleases (URI domain) AYM25_RS06175 SM00740 AYM25_RS06175 AYM25_RS06195 SM00842 Cell division protein FtsA AYM25_RS06200 SM00864 Tubulin/FtsZ family, GTPase domain AYM25_RS06200 SM00865 Tubulin/FtsZ family, C-terminal domain AYM25_RS06255 SM00363 S4 RNA-binding domain AYM25_RS06280 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AYM25_RS06285 SM00851 MGS-like domain AYM25_RS06285 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYM25_RS06285 SM01209 AYM25_RS06285 AYM25_RS06290 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AYM25_RS06315 SM00072 Guanylate kinase homologues. AYM25_RS06320 SM01409 AYM25_RS06320 AYM25_RS06330 SM00487 DEAD-like helicases superfamily AYM25_RS06330 SM00490 helicase superfamily c-terminal domain AYM25_RS06365 SM00331 Sigma factor PP2C-like phosphatases AYM25_RS06365 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AYM25_RS06370 SM00220 Serine/Threonine protein kinases, catalytic domain AYM25_RS06370 SM00740 AYM25_RS06370 AYM25_RS06385 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AYM25_RS06400 SM01120 AYM25_RS06400 AYM25_RS06400 SM01121 AYM25_RS06400 AYM25_RS06405 SM00487 DEAD-like helicases superfamily AYM25_RS06405 SM00490 helicase superfamily c-terminal domain AYM25_RS06420 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AYM25_RS06425 SM00822 AYM25_RS06425 AYM25_RS06440 SM00358 Double-stranded RNA binding motif AYM25_RS06440 SM00535 Ribonuclease III family AYM25_RS06445 SM00968 SMC proteins Flexible Hinge Domain AYM25_RS06450 SM00382 ATPases associated with a variety of cellular activities AYM25_RS06450 SM00962 SRP54-type protein, GTPase domain AYM25_RS06450 SM00963 SRP54-type protein, helical bundle domain AYM25_RS06460 SM00382 ATPases associated with a variety of cellular activities AYM25_RS06460 SM00962 SRP54-type protein, GTPase domain AYM25_RS06460 SM00963 SRP54-type protein, helical bundle domain AYM25_RS06505 SM00881 CoA binding domain AYM25_RS06510 SM00257 Lysin motif AYM25_RS06525 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AYM25_RS06525 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AYM25_RS06525 SM00493 AYM25_RS06525 AYM25_RS06545 SM00382 ATPases associated with a variety of cellular activities AYM25_RS06545 SM01086 C-terminal, D2-small domain, of ClpB protein AYM25_RS06605 SM00479 AYM25_RS06605 AYM25_RS06605 SM00481 DNA polymerase alpha chain like domain AYM25_RS06620 SM00316 Ribosomal protein S1-like RNA-binding domain AYM25_RS06620 SM00322 K homology RNA-binding domain AYM25_RS06650 SM00904 Riboflavin kinase AYM25_RS06655 SM01387 AYM25_RS06655 AYM25_RS06660 SM00316 Ribosomal protein S1-like RNA-binding domain AYM25_RS06660 SM00322 K homology RNA-binding domain AYM25_RS06670 SM00849 Metallo-beta-lactamase superfamily AYM25_RS06675 SM00382 ATPases associated with a variety of cellular activities AYM25_RS06675 SM00843 AYM25_RS06675 AYM25_RS06680 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM25_RS06680 SM00866 AYM25_RS06680 AYM25_RS06705 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS06715 SM00852 Probable molybdopterin binding domain AYM25_RS06720 SM00382 ATPases associated with a variety of cellular activities AYM25_RS06725 SM00322 K homology RNA-binding domain AYM25_RS06725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM25_RS06755 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM25_RS06770 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AYM25_RS06770 SM00534 ATPase domain of DNA mismatch repair MUTS family AYM25_RS06775 SM00853 MutL C terminal dimerisation domain AYM25_RS06775 SM01340 AYM25_RS06775 AYM25_RS06830 SM00422 helix_turn_helix, mercury resistance AYM25_RS06835 SM01230 AYM25_RS06835 AYM25_RS06945 SM00155 Phospholipase D. Active site motifs. AYM25_RS06950 SM00382 ATPases associated with a variety of cellular activities AYM25_RS06965 SM00421 helix_turn_helix, Lux Regulon AYM25_RS06965 SM00448 cheY-homologous receiver domain AYM25_RS06975 SM00318 Staphylococcal nuclease homologues AYM25_RS07030 SM01060 AYM25_RS07030 AYM25_RS07045 SM01240 AYM25_RS07045 AYM25_RS07075 SM00861 Transketolase, pyrimidine binding domain AYM25_RS07145 SM01207 AYM25_RS07145 AYM25_RS07150 SM00387 Histidine kinase-like ATPases AYM25_RS07150 SM00433 TopoisomeraseII AYM25_RS07155 SM00434 DNA Topoisomerase IV AYM25_RS07170 SM01061 CAT RNA binding domain AYM25_RS07275 SM00382 ATPases associated with a variety of cellular activities AYM25_RS07280 SM00382 ATPases associated with a variety of cellular activities AYM25_RS07315 SM00382 ATPases associated with a variety of cellular activities AYM25_RS07345 SM00382 ATPases associated with a variety of cellular activities AYM25_RS07360 SM00859 Semialdehyde dehydrogenase, NAD binding domain AYM25_RS07365 SM01130 AYM25_RS07365 AYM25_RS07385 SM01005 Alanine racemase, C-terminal domain AYM25_RS07400 SM00357 Cold shock protein domain AYM25_RS07440 SM00327 von Willebrand factor (vWF) type A domain AYM25_RS07465 SM00861 Transketolase, pyrimidine binding domain AYM25_RS07470 SM00387 Histidine kinase-like ATPases AYM25_RS07470 SM00388 His Kinase A (phosphoacceptor) domain AYM25_RS07475 SM00448 cheY-homologous receiver domain AYM25_RS07475 SM00862 Transcriptional regulatory protein, C terminal AYM25_RS07490 SM01321 AYM25_RS07490 AYM25_RS07495 SM00014 Acid phosphatase homologues AYM25_RS07510 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYM25_RS07510 SM00245 tail specific protease AYM25_RS07555 SM00567 E-Z type HEAT repeats AYM25_RS07555 SM00932 Scaffold protein Nfu/NifU N terminal AYM25_RS07560 SM00932 Scaffold protein Nfu/NifU N terminal AYM25_RS07585 SM00844 GA module AYM25_RS07605 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AYM25_RS07605 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AYM25_RS07610 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AYM25_RS07610 SM00475 5'-3' exonuclease AYM25_RS07630 SM00981 AYM25_RS07630 AYM25_RS07675 SM00478 endonuclease III AYM25_RS07675 SM00525 AYM25_RS07675 AYM25_RS07690 SM00479 AYM25_RS07690 AYM25_RS07690 SM00491 AYM25_RS07690 AYM25_RS07725 SM00914 AYM25_RS07725 AYM25_RS07730 SM00028 Tetratricopeptide repeats AYM25_RS07755 SM00562 AYM25_RS07755 AYM25_RS07780 SM00411 bacterial (prokaryotic) histone like domain AYM25_RS07795 SM00316 Ribosomal protein S1-like RNA-binding domain AYM25_RS07820 SM00870 AYM25_RS07820 AYM25_RS07835 SM00257 Lysin motif AYM25_RS07840 SM00487 DEAD-like helicases superfamily AYM25_RS07840 SM00490 helicase superfamily c-terminal domain AYM25_RS07900 SM00287 Bacterial SH3 domain homologues AYM25_RS07900 SM00646 AYM25_RS07900 AYM25_RS07980 SM00635 Bacterial Ig-like domain 2 AYM25_RS08035 SM00507 HNH nucleases AYM25_RS08045 SM00487 DEAD-like helicases superfamily AYM25_RS08050 SM00990 AYM25_RS08050 AYM25_RS08135 SM00482 DNA polymerase A domain AYM25_RS08190 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS08195 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS08245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYM25_RS08245 SM00387 Histidine kinase-like ATPases AYM25_RS08245 SM00388 His Kinase A (phosphoacceptor) domain AYM25_RS08250 SM00448 cheY-homologous receiver domain AYM25_RS08250 SM00862 Transcriptional regulatory protein, C terminal AYM25_RS08255 SM00363 S4 RNA-binding domain AYM25_RS08320 SM00342 helix_turn_helix, arabinose operon control protein AYM25_RS08320 SM00871 Bacterial transcription activator, effector binding domain AYM25_RS08325 SM00642 Alpha-amylase domain AYM25_RS08330 SM00354 helix_turn _helix lactose operon repressor AYM25_RS08345 SM01350 AYM25_RS08345 AYM25_RS08375 SM00861 Transketolase, pyrimidine binding domain AYM25_RS08425 SM00878 Biotin carboxylase C-terminal domain AYM25_RS08435 SM00841 Elongation factor P, C-terminal AYM25_RS08435 SM01185 AYM25_RS08435 AYM25_RS08460 SM00450 Rhodanese Homology Domain AYM25_RS08520 SM00849 Metallo-beta-lactamase superfamily AYM25_RS08575 SM00382 ATPases associated with a variety of cellular activities AYM25_RS08580 SM00518 AP endonuclease family 2 AYM25_RS08585 SM00487 DEAD-like helicases superfamily AYM25_RS08585 SM00490 helicase superfamily c-terminal domain AYM25_RS08605 SM00400 zinc finger AYM25_RS08605 SM00493 AYM25_RS08605 AYM25_RS08615 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM25_RS08675 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM25_RS08690 SM00271 DnaJ molecular chaperone homology domain AYM25_RS08710 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM25_RS08720 SM00838 Elongation factor G C-terminus AYM25_RS08735 SM00849 Metallo-beta-lactamase superfamily AYM25_RS08745 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM25_RS08760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM25_RS08770 SM01103 AYM25_RS08770 AYM25_RS08820 SM00878 Biotin carboxylase C-terminal domain AYM25_RS08830 SM00797 Allophanate hydrolase subunit 2 AYM25_RS08835 SM00796 Allophanate hydrolase subunit 1 AYM25_RS08870 SM00732 Likely ribonuclease with RNase H fold. AYM25_RS08880 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AYM25_RS08885 SM00382 ATPases associated with a variety of cellular activities AYM25_RS08890 SM00028 Tetratricopeptide repeats AYM25_RS08930 SM00382 ATPases associated with a variety of cellular activities AYM25_RS08960 SM00287 Bacterial SH3 domain homologues AYM25_RS08960 SM00646 AYM25_RS08960 AYM25_RS08970 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM25_RS08970 SM00954 Region found in RelA / SpoT proteins AYM25_RS08990 SM01323 AYM25_RS08990 AYM25_RS09005 SM00382 ATPases associated with a variety of cellular activities AYM25_RS09010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM25_RS09115 SM01004 Delta-aminolevulinic acid dehydratase AYM25_RS09145 SM00382 ATPases associated with a variety of cellular activities AYM25_RS09145 SM00994 ClpX C4-type zinc finger AYM25_RS09145 SM01086 C-terminal, D2-small domain, of ClpB protein AYM25_RS09195 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AYM25_RS09220 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYM25_RS09230 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AYM25_RS09230 SM01232 AYM25_RS09230 AYM25_RS09235 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AYM25_RS09235 SM00474 3'-5' exonuclease AYM25_RS09235 SM00475 5'-3' exonuclease AYM25_RS09235 SM00482 DNA polymerase A domain AYM25_RS09245 SM00387 Histidine kinase-like ATPases AYM25_RS09245 SM00388 His Kinase A (phosphoacceptor) domain AYM25_RS09250 SM00448 cheY-homologous receiver domain AYM25_RS09250 SM00862 Transcriptional regulatory protein, C terminal AYM25_RS09260 SM01329 AYM25_RS09260 AYM25_RS09300 SM00919 Malic enzyme, NAD binding domain AYM25_RS09300 SM01274 AYM25_RS09300 AYM25_RS09305 SM00481 DNA polymerase alpha chain like domain AYM25_RS09315 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM25_RS09325 SM00849 Metallo-beta-lactamase superfamily AYM25_RS09340 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AYM25_RS09340 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AYM25_RS09370 SM00981 AYM25_RS09370 AYM25_RS09390 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AYM25_RS09395 SM00363 S4 RNA-binding domain AYM25_RS09395 SM01390 AYM25_RS09395 AYM25_RS09440 SM00563 Phosphate acyltransferases AYM25_RS09445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYM25_RS09450 SM00363 S4 RNA-binding domain AYM25_RS09465 SM00725 NEAr Transporter domain AYM25_RS09490 SM00354 helix_turn _helix lactose operon repressor AYM25_RS09500 SM00830 Chorismate mutase type II AYM25_RS09525 SM00843 AYM25_RS09525 AYM25_RS09555 SM00849 Metallo-beta-lactamase superfamily AYM25_RS09595 SM00363 S4 RNA-binding domain AYM25_RS09615 SM00450 Rhodanese Homology Domain AYM25_RS09630 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM25_RS09640 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS09695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYM25_RS09705 SM00226 Low molecular weight phosphatase family AYM25_RS09710 SM00047 Lysozyme subfamily 2 AYM25_RS09800 SM01234 AYM25_RS09800 AYM25_RS09820 SM00894 Excalibur calcium-binding domain AYM25_RS09960 SM00382 ATPases associated with a variety of cellular activities AYM25_RS09975 SM01260 AYM25_RS09975 AYM25_RS10105 SM00382 ATPases associated with a variety of cellular activities AYM25_RS10135 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM25_RS10170 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS10175 SM00421 helix_turn_helix, Lux Regulon AYM25_RS10175 SM00448 cheY-homologous receiver domain AYM25_RS10230 SM00382 ATPases associated with a variety of cellular activities AYM25_RS10235 SM00062 Bacterial periplasmic substrate-binding proteins AYM25_RS10430 SM00382 ATPases associated with a variety of cellular activities AYM25_RS10440 SM00478 endonuclease III AYM25_RS10510 SM00226 Low molecular weight phosphatase family AYM25_RS10525 SM00421 helix_turn_helix, Lux Regulon AYM25_RS10525 SM00448 cheY-homologous receiver domain AYM25_RS10530 SM00387 Histidine kinase-like ATPases AYM25_RS10590 SM00479 AYM25_RS10590 AYM25_RS10610 SM00046 Diacylglycerol kinase catalytic domain (presumed) AYM25_RS10625 SM00845 GatB domain AYM25_RS10650 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM25_RS10650 SM00292 breast cancer carboxy-terminal domain AYM25_RS10650 SM00532 Ligase N family AYM25_RS10670 SM00998 Adenylosuccinate lyase C-terminus AYM25_RS10730 SM00710 Parallel beta-helix repeats AYM25_RS10740 SM01131 AYM25_RS10740 AYM25_RS10800 SM00382 ATPases associated with a variety of cellular activities AYM25_RS10810 SM00382 ATPases associated with a variety of cellular activities AYM25_RS10815 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM25_RS10875 SM00287 Bacterial SH3 domain homologues AYM25_RS10955 SM00635 Bacterial Ig-like domain 2 AYM25_RS11015 SM00507 HNH nucleases AYM25_RS11160 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS11170 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS11175 SM00479 AYM25_RS11175 AYM25_RS11275 SM00883 Chaperonin 10 Kd subunit AYM25_RS11310 SM00793 Accessory gene regulator B AYM25_RS11315 SM00794 Staphylococcal AgrD protein AYM25_RS11340 SM00640 Glycosyl hydrolases family 32 AYM25_RS11345 SM00354 helix_turn _helix lactose operon repressor AYM25_RS11365 SM00881 CoA binding domain AYM25_RS11370 SM00382 ATPases associated with a variety of cellular activities AYM25_RS11380 SM00534 ATPase domain of DNA mismatch repair MUTS family AYM25_RS11430 SM00917 LeuA allosteric (dimerisation) domain AYM25_RS11435 SM01329 AYM25_RS11435 AYM25_RS11495 SM00731 SprT homologues. AYM25_RS11500 SM00316 Ribosomal protein S1-like RNA-binding domain AYM25_RS11500 SM00732 Likely ribonuclease with RNase H fold. AYM25_RS11520 SM00331 Sigma factor PP2C-like phosphatases AYM25_RS11520 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AYM25_RS11540 SM01005 Alanine racemase, C-terminal domain AYM25_RS11585 SM00387 Histidine kinase-like ATPases AYM25_RS11585 SM00388 His Kinase A (phosphoacceptor) domain AYM25_RS11590 SM00448 cheY-homologous receiver domain AYM25_RS11590 SM00862 Transcriptional regulatory protein, C terminal AYM25_RS11595 SM00487 DEAD-like helicases superfamily AYM25_RS11595 SM00490 helicase superfamily c-terminal domain AYM25_RS11630 SM00155 Phospholipase D. Active site motifs. AYM25_RS11635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM25_RS11720 SM00382 ATPases associated with a variety of cellular activities AYM25_RS11780 SM00226 Low molecular weight phosphatase family AYM25_RS11795 SM00937 AYM25_RS11795 AYM25_RS11815 SM00357 Cold shock protein domain AYM25_RS11815 SM00382 ATPases associated with a variety of cellular activities AYM25_RS11815 SM00959 Rho termination factor, N-terminal domain AYM25_RS11890 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AYM25_RS11900 SM01133 AYM25_RS11900 AYM25_RS11940 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYM25_RS11980 SM00382 ATPases associated with a variety of cellular activities AYM25_RS12205 SM00829 Enoylreductase AYM25_RS12210 SM00829 Enoylreductase AYM25_RS12235 SM01133 AYM25_RS12235 AYM25_RS12250 SM00420 helix_turn_helix, Deoxyribose operon repressor AYM25_RS12250 SM01134 AYM25_RS12250 AYM25_RS12280 SM00422 helix_turn_helix, mercury resistance AYM25_RS12335 SM00382 ATPases associated with a variety of cellular activities AYM25_RS12375 SM00382 ATPases associated with a variety of cellular activities AYM25_RS12380 SM00382 ATPases associated with a variety of cellular activities AYM25_RS12390 SM00662 RNA polymerases D AYM25_RS12410 SM00316 Ribosomal protein S1-like RNA-binding domain AYM25_RS12465 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AYM25_RS12470 SM01374 AYM25_RS12470 AYM25_RS12490 SM00322 K homology RNA-binding domain AYM25_RS12505 SM01382 AYM25_RS12505 AYM25_RS12505 SM01383 AYM25_RS12505 AYM25_RS12525 SM01403 AYM25_RS12525 AYM25_RS12540 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AYM25_RS12540 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AYM25_RS12540 SM00493 AYM25_RS12540 AYM25_RS12600 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS12630 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM25_RS12655 SM00852 Probable molybdopterin binding domain AYM25_RS12665 SM00852 Probable molybdopterin binding domain AYM25_RS12675 SM00382 ATPases associated with a variety of cellular activities AYM25_RS12740 SM00988 UreE urease accessory protein, N-terminal domain AYM25_RS12780 SM00342 helix_turn_helix, arabinose operon control protein AYM25_RS12830 SM00047 Lysozyme subfamily 2 AYM25_RS12845 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AYM25_RS12845 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AYM25_RS12860 SM00420 helix_turn_helix, Deoxyribose operon repressor AYM25_RS13015 SM00382 ATPases associated with a variety of cellular activities AYM25_RS13105 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS13125 SM00382 ATPases associated with a variety of cellular activities AYM25_RS13135 SM00448 cheY-homologous receiver domain AYM25_RS13135 SM00862 Transcriptional regulatory protein, C terminal AYM25_RS13140 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYM25_RS13140 SM00387 Histidine kinase-like ATPases AYM25_RS13140 SM00388 His Kinase A (phosphoacceptor) domain AYM25_RS13145 SM00850 LytTr DNA-binding domain AYM25_RS13180 SM00829 Enoylreductase AYM25_RS13235 SM00342 helix_turn_helix, arabinose operon control protein AYM25_RS13260 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS13285 SM00422 helix_turn_helix, mercury resistance AYM25_RS13290 SM00421 helix_turn_helix, Lux Regulon AYM25_RS13290 SM00448 cheY-homologous receiver domain AYM25_RS13295 SM00387 Histidine kinase-like ATPases AYM25_RS13320 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AYM25_RS13400 SM00382 ATPases associated with a variety of cellular activities AYM25_RS13410 SM00062 Bacterial periplasmic substrate-binding proteins AYM25_RS13410 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AYM25_RS13430 SM00855 Phosphoglycerate mutase family AYM25_RS13490 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM25_RS13490 SM00876 Biotin and Thiamin Synthesis associated domain AYM25_RS13515 SM00382 ATPases associated with a variety of cellular activities AYM25_RS13520 SM00382 ATPases associated with a variety of cellular activities AYM25_RS13560 SM00871 Bacterial transcription activator, effector binding domain AYM25_RS13640 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM25_RS13640 SM00382 ATPases associated with a variety of cellular activities AYM25_RS13690 SM00382 ATPases associated with a variety of cellular activities AYM25_RS13735 SM00382 ATPases associated with a variety of cellular activities AYM25_RS13740 SM00382 ATPases associated with a variety of cellular activities AYM25_RS13875 SM00487 DEAD-like helicases superfamily AYM25_RS13875 SM00490 helicase superfamily c-terminal domain AYM25_RS13965 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM25_RS13965 SM00895 AYM25_RS13965 AYM25_RS13970 SM00422 helix_turn_helix, mercury resistance AYM25_RS13975 SM00954 Region found in RelA / SpoT proteins AYM25_RS14010 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS14020 SM00382 ATPases associated with a variety of cellular activities AYM25_RS14050 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS14080 SM00382 ATPases associated with a variety of cellular activities AYM25_RS14215 SM00382 ATPases associated with a variety of cellular activities AYM25_RS14215 SM01086 C-terminal, D2-small domain, of ClpB protein AYM25_RS14230 SM00899 AYM25_RS14230 AYM25_RS14255 SM01266 AYM25_RS14255 AYM25_RS14460 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AYM25_RS14645 SM00382 ATPases associated with a variety of cellular activities AYM25_RS14650 SM00387 Histidine kinase-like ATPases AYM25_RS14655 SM00448 cheY-homologous receiver domain AYM25_RS14655 SM00862 Transcriptional regulatory protein, C terminal AYM25_RS14665 SM00098 Alkaline phosphatase homologues AYM25_RS14675 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM25_RS14760 SM00047 Lysozyme subfamily 2 AYM25_RS14785 SM00957 SecA DEAD-like domain AYM25_RS14785 SM00958 SecA preprotein cross-linking domain AYM25_RS14815 SM00903 Flavin reductase like domain AYM25_RS14835 SM00903 Flavin reductase like domain AYM25_RS14970 SM00382 ATPases associated with a variety of cellular activities AYM25_RS14985 SM00867 YceI-like domain AYM25_RS14995 SM00450 Rhodanese Homology Domain AYM25_RS15050 SM00382 ATPases associated with a variety of cellular activities AYM25_RS15085 SM00357 Cold shock protein domain AYM25_RS15090 SM00530 Helix-turn-helix XRE-family like proteins AYM25_RS15110 SM00470 ParB-like nuclease domain AYM25_RS15120 SM01228 AYM25_RS15120