AYM30_RS00005 SM00382 ATPases associated with a variety of cellular activities AYM30_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AYM30_RS00010 SM00480 DNA polymerase III beta subunit AYM30_RS00025 SM00387 Histidine kinase-like ATPases AYM30_RS00025 SM00433 TopoisomeraseII AYM30_RS00030 SM00434 DNA Topoisomerase IV AYM30_RS00075 SM00267 diguanylate cyclase AYM30_RS00095 SM00788 Adenylosuccinate synthetase AYM30_RS00110 SM00448 cheY-homologous receiver domain AYM30_RS00110 SM00862 Transcriptional regulatory protein, C terminal AYM30_RS00115 SM00091 PAS domain AYM30_RS00115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYM30_RS00115 SM00387 Histidine kinase-like ATPases AYM30_RS00115 SM00388 His Kinase A (phosphoacceptor) domain AYM30_RS00130 SM00849 Metallo-beta-lactamase superfamily AYM30_RS00210 SM00857 Resolvase, N terminal domain AYM30_RS00215 SM00857 Resolvase, N terminal domain AYM30_RS00300 SM00829 Enoylreductase AYM30_RS00410 SM00382 ATPases associated with a variety of cellular activities AYM30_RS00415 SM00382 ATPases associated with a variety of cellular activities AYM30_RS00465 SM00450 Rhodanese Homology Domain AYM30_RS00470 SM00450 Rhodanese Homology Domain AYM30_RS00470 SM00849 Metallo-beta-lactamase superfamily AYM30_RS00550 SM00148 Phospholipase C, catalytic domain (part); domain X AYM30_RS00575 SM00342 helix_turn_helix, arabinose operon control protein AYM30_RS00605 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM30_RS00620 SM00257 Lysin motif AYM30_RS00630 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS00690 SM00470 ParB-like nuclease domain AYM30_RS00710 SM00822 AYM30_RS00710 AYM30_RS00755 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM30_RS00770 SM01133 AYM30_RS00770 AYM30_RS00790 SM00382 ATPases associated with a variety of cellular activities AYM30_RS00795 SM00062 Bacterial periplasmic substrate-binding proteins AYM30_RS00925 SM00984 UDP binding domain AYM30_RS00965 SM00382 ATPases associated with a variety of cellular activities AYM30_RS01025 SM00859 Semialdehyde dehydrogenase, NAD binding domain AYM30_RS01085 SM00487 DEAD-like helicases superfamily AYM30_RS01105 SM00382 ATPases associated with a variety of cellular activities AYM30_RS01145 SM00382 ATPases associated with a variety of cellular activities AYM30_RS01190 SM00342 helix_turn_helix, arabinose operon control protein AYM30_RS01190 SM00448 cheY-homologous receiver domain AYM30_RS01260 SM00882 Coenzyme A transferase AYM30_RS01340 SM00829 Enoylreductase AYM30_RS01350 SM00829 Enoylreductase AYM30_RS01400 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AYM30_RS01400 SM00387 Histidine kinase-like ATPases AYM30_RS01405 SM00448 cheY-homologous receiver domain AYM30_RS01405 SM00850 LytTr DNA-binding domain AYM30_RS01420 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM30_RS01420 SM00866 AYM30_RS01420 AYM30_RS01470 SM00354 helix_turn _helix lactose operon repressor AYM30_RS01505 SM00382 ATPases associated with a variety of cellular activities AYM30_RS01705 SM00382 ATPases associated with a variety of cellular activities AYM30_RS01740 SM01130 AYM30_RS01740 AYM30_RS01795 SM00506 Appr-1"-p processing enzyme AYM30_RS01840 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS01920 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS01930 SM00382 ATPases associated with a variety of cellular activities AYM30_RS01980 SM00470 ParB-like nuclease domain AYM30_RS02070 SM00855 Phosphoglycerate mutase family AYM30_RS02145 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM30_RS02145 SM01240 AYM30_RS02145 AYM30_RS02355 SM00833 Cobalamin synthesis protein cobW C-terminal domain AYM30_RS02390 SM00014 Acid phosphatase homologues AYM30_RS02420 SM00382 ATPases associated with a variety of cellular activities AYM30_RS02420 SM00930 AYM30_RS02420 AYM30_RS02435 SM00257 Lysin motif AYM30_RS02490 SM00642 Alpha-amylase domain AYM30_RS02495 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM30_RS02495 SM00866 AYM30_RS02495 AYM30_RS02515 SM00382 ATPases associated with a variety of cellular activities AYM30_RS02525 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM30_RS02525 SM00493 AYM30_RS02525 AYM30_RS02590 SM00465 GIY-YIG type nucleases (URI domain) AYM30_RS02610 SM00493 AYM30_RS02610 AYM30_RS02615 SM00650 Ribosomal RNA adenine dimethylases AYM30_RS02655 SM01400 AYM30_RS02655 AYM30_RS02675 SM00487 DEAD-like helicases superfamily AYM30_RS02675 SM00490 helicase superfamily c-terminal domain AYM30_RS02675 SM00982 AYM30_RS02675 AYM30_RS02675 SM01058 CarD-like/TRCF domain AYM30_RS02690 SM00363 S4 RNA-binding domain AYM30_RS02700 SM00316 Ribosomal protein S1-like RNA-binding domain AYM30_RS02705 SM00977 TilS substrate C-terminal domain AYM30_RS02715 SM00382 ATPases associated with a variety of cellular activities AYM30_RS02735 SM00905 Dihydroneopterin aldolase AYM30_RS02820 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM30_RS02855 SM00382 ATPases associated with a variety of cellular activities AYM30_RS02855 SM01086 C-terminal, D2-small domain, of ClpB protein AYM30_RS02860 SM00382 ATPases associated with a variety of cellular activities AYM30_RS02865 SM00670 Large family of predicted nucleotide-binding domains AYM30_RS02885 SM00840 AYM30_RS02885 AYM30_RS02890 SM00535 Ribonuclease III family AYM30_RS02895 SM00967 RNA 2'-O ribose methyltransferase substrate binding AYM30_RS02920 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AYM30_RS02920 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AYM30_RS02925 SM00649 Ribosomal protein L11/L12 AYM30_RS02955 SM00663 RNA polymerase I subunit A N-terminus AYM30_RS02975 SM00838 Elongation factor G C-terminus AYM30_RS02975 SM00889 Elongation factor G, domain IV AYM30_RS03100 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AYM30_RS03155 SM00986 Uracil DNA glycosylase superfamily AYM30_RS03155 SM00987 UreE urease accessory protein, C-terminal domain AYM30_RS03335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM30_RS03345 SM00829 Enoylreductase AYM30_RS03360 SM00836 DALR anticodon binding domain AYM30_RS03360 SM01016 Arginyl tRNA synthetase N terminal dom AYM30_RS03375 SM00478 endonuclease III AYM30_RS03570 SM00382 ATPases associated with a variety of cellular activities AYM30_RS03575 SM00529 Helix-turn-helix diphteria tox regulatory element AYM30_RS03575 SM00899 AYM30_RS03575 AYM30_RS03590 SM00382 ATPases associated with a variety of cellular activities AYM30_RS03620 SM00382 ATPases associated with a variety of cellular activities AYM30_RS03640 SM00382 ATPases associated with a variety of cellular activities AYM30_RS03660 SM01120 AYM30_RS03660 AYM30_RS03705 SM00448 cheY-homologous receiver domain AYM30_RS03705 SM00862 Transcriptional regulatory protein, C terminal AYM30_RS03710 SM00387 Histidine kinase-like ATPases AYM30_RS03715 SM00382 ATPases associated with a variety of cellular activities AYM30_RS03735 SM00257 Lysin motif AYM30_RS03840 SM00382 ATPases associated with a variety of cellular activities AYM30_RS03845 SM00382 ATPases associated with a variety of cellular activities AYM30_RS03850 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS03855 SM00833 Cobalamin synthesis protein cobW C-terminal domain AYM30_RS03910 SM00420 helix_turn_helix, Deoxyribose operon repressor AYM30_RS03910 SM01134 AYM30_RS03910 AYM30_RS03930 SM01091 Transporter associated domain AYM30_RS03945 SM00387 Histidine kinase-like ATPases AYM30_RS03945 SM00388 His Kinase A (phosphoacceptor) domain AYM30_RS03950 SM00448 cheY-homologous receiver domain AYM30_RS03950 SM00862 Transcriptional regulatory protein, C terminal AYM30_RS04005 SM00796 Allophanate hydrolase subunit 1 AYM30_RS04010 SM00797 Allophanate hydrolase subunit 2 AYM30_RS04020 SM00382 ATPases associated with a variety of cellular activities AYM30_RS04025 SM00341 Helicase and RNase D C-terminal AYM30_RS04025 SM00487 DEAD-like helicases superfamily AYM30_RS04025 SM00490 helicase superfamily c-terminal domain AYM30_RS04025 SM00956 AYM30_RS04025 AYM30_RS04030 SM00382 ATPases associated with a variety of cellular activities AYM30_RS04060 SM00046 Diacylglycerol kinase catalytic domain (presumed) AYM30_RS04135 SM00382 ATPases associated with a variety of cellular activities AYM30_RS04195 SM00267 diguanylate cyclase AYM30_RS04215 SM00487 DEAD-like helicases superfamily AYM30_RS04215 SM00490 helicase superfamily c-terminal domain AYM30_RS04230 SM00957 SecA DEAD-like domain AYM30_RS04230 SM00958 SecA preprotein cross-linking domain AYM30_RS04240 SM00937 AYM30_RS04240 AYM30_RS04250 SM00257 Lysin motif AYM30_RS04265 SM00487 DEAD-like helicases superfamily AYM30_RS04265 SM00490 helicase superfamily c-terminal domain AYM30_RS04295 SM00028 Tetratricopeptide repeats AYM30_RS04365 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYM30_RS04385 SM01192 AYM30_RS04385 AYM30_RS04385 SM01193 AYM30_RS04385 AYM30_RS04405 SM00316 Ribosomal protein S1-like RNA-binding domain AYM30_RS04405 SM00357 Cold shock protein domain AYM30_RS04405 SM00955 AYM30_RS04405 AYM30_RS04475 SM00318 Staphylococcal nuclease homologues AYM30_RS04480 SM00357 Cold shock protein domain AYM30_RS04520 SM00855 Phosphoglycerate mutase family AYM30_RS04580 SM00493 AYM30_RS04580 AYM30_RS04590 SM00382 ATPases associated with a variety of cellular activities AYM30_RS04590 SM00930 AYM30_RS04590 AYM30_RS04625 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS04630 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS04660 SM00885 D5 N terminal like AYM30_RS04720 SM00382 ATPases associated with a variety of cellular activities AYM30_RS04760 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS04775 SM01040 BRO family, N-terminal domain AYM30_RS04820 SM00382 ATPases associated with a variety of cellular activities AYM30_RS05050 SM00047 Lysozyme subfamily 2 AYM30_RS05070 SM00287 Bacterial SH3 domain homologues AYM30_RS05070 SM00644 AYM30_RS05070 AYM30_RS05125 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM30_RS05270 SM01298 AYM30_RS05270 AYM30_RS05280 SM00316 Ribosomal protein S1-like RNA-binding domain AYM30_RS05295 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYM30_RS05385 SM00382 ATPases associated with a variety of cellular activities AYM30_RS05385 SM01086 C-terminal, D2-small domain, of ClpB protein AYM30_RS05430 SM00825 Beta-ketoacyl synthase AYM30_RS05450 SM00382 ATPases associated with a variety of cellular activities AYM30_RS05455 SM00382 ATPases associated with a variety of cellular activities AYM30_RS05470 SM00382 ATPases associated with a variety of cellular activities AYM30_RS05475 SM00382 ATPases associated with a variety of cellular activities AYM30_RS05530 SM01118 AYM30_RS05530 AYM30_RS05540 SM00954 Region found in RelA / SpoT proteins AYM30_RS05555 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM30_RS05555 SM00924 MgtE intracellular N domain AYM30_RS05620 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYM30_RS05650 SM00914 AYM30_RS05650 AYM30_RS05695 SM00382 ATPases associated with a variety of cellular activities AYM30_RS05795 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS05805 SM00047 Lysozyme subfamily 2 AYM30_RS05805 SM00644 AYM30_RS05805 AYM30_RS05870 SM01001 AIR carboxylase AYM30_RS05890 SM01211 AYM30_RS05890 AYM30_RS05915 SM00798 AICARFT/IMPCHase bienzyme AYM30_RS05915 SM00851 MGS-like domain AYM30_RS05920 SM01209 AYM30_RS05920 AYM30_RS05920 SM01210 AYM30_RS05920 AYM30_RS05930 SM00382 ATPases associated with a variety of cellular activities AYM30_RS06005 SM00849 Metallo-beta-lactamase superfamily AYM30_RS06035 SM00861 Transketolase, pyrimidine binding domain AYM30_RS06055 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS06060 SM00382 ATPases associated with a variety of cellular activities AYM30_RS06110 SM00838 Elongation factor G C-terminus AYM30_RS06135 SM00878 Biotin carboxylase C-terminal domain AYM30_RS06215 SM00725 NEAr Transporter domain AYM30_RS06220 SM00725 NEAr Transporter domain AYM30_RS06225 SM00725 NEAr Transporter domain AYM30_RS06260 SM00967 RNA 2'-O ribose methyltransferase substrate binding AYM30_RS06270 SM00873 B3/4 domain AYM30_RS06270 SM00874 tRNA synthetase B5 domain AYM30_RS06270 SM00896 Ferredoxin-fold anticodon binding domain AYM30_RS06295 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM30_RS06295 SM00481 DNA polymerase alpha chain like domain AYM30_RS06295 SM00483 DNA polymerase X family AYM30_RS06300 SM00463 Small MutS-related domain AYM30_RS06300 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AYM30_RS06300 SM00534 ATPase domain of DNA mismatch repair MUTS family AYM30_RS06315 SM00465 GIY-YIG type nucleases (URI domain) AYM30_RS06515 SM00740 AYM30_RS06515 AYM30_RS06535 SM00842 Cell division protein FtsA AYM30_RS06540 SM00864 Tubulin/FtsZ family, GTPase domain AYM30_RS06540 SM00865 Tubulin/FtsZ family, C-terminal domain AYM30_RS06565 SM00363 S4 RNA-binding domain AYM30_RS06595 SM00363 S4 RNA-binding domain AYM30_RS06620 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AYM30_RS06625 SM00851 MGS-like domain AYM30_RS06625 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYM30_RS06625 SM01209 AYM30_RS06625 AYM30_RS06630 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AYM30_RS06655 SM00072 Guanylate kinase homologues. AYM30_RS06660 SM01409 AYM30_RS06660 AYM30_RS06670 SM00487 DEAD-like helicases superfamily AYM30_RS06670 SM00490 helicase superfamily c-terminal domain AYM30_RS06705 SM00331 Sigma factor PP2C-like phosphatases AYM30_RS06705 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AYM30_RS06710 SM00220 Serine/Threonine protein kinases, catalytic domain AYM30_RS06710 SM00740 AYM30_RS06710 AYM30_RS06725 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AYM30_RS06740 SM01120 AYM30_RS06740 AYM30_RS06740 SM01121 AYM30_RS06740 AYM30_RS06745 SM00487 DEAD-like helicases superfamily AYM30_RS06745 SM00490 helicase superfamily c-terminal domain AYM30_RS06760 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AYM30_RS06765 SM00822 AYM30_RS06765 AYM30_RS06780 SM00358 Double-stranded RNA binding motif AYM30_RS06780 SM00535 Ribonuclease III family AYM30_RS06785 SM00968 SMC proteins Flexible Hinge Domain AYM30_RS06790 SM00382 ATPases associated with a variety of cellular activities AYM30_RS06790 SM00962 SRP54-type protein, GTPase domain AYM30_RS06790 SM00963 SRP54-type protein, helical bundle domain AYM30_RS06800 SM00382 ATPases associated with a variety of cellular activities AYM30_RS06800 SM00962 SRP54-type protein, GTPase domain AYM30_RS06800 SM00963 SRP54-type protein, helical bundle domain AYM30_RS06845 SM00881 CoA binding domain AYM30_RS06850 SM00257 Lysin motif AYM30_RS06865 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AYM30_RS06865 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AYM30_RS06865 SM00493 AYM30_RS06865 AYM30_RS06885 SM00382 ATPases associated with a variety of cellular activities AYM30_RS06885 SM01086 C-terminal, D2-small domain, of ClpB protein AYM30_RS06945 SM00479 AYM30_RS06945 AYM30_RS06945 SM00481 DNA polymerase alpha chain like domain AYM30_RS06960 SM00316 Ribosomal protein S1-like RNA-binding domain AYM30_RS06960 SM00322 K homology RNA-binding domain AYM30_RS06990 SM00904 Riboflavin kinase AYM30_RS06995 SM01387 AYM30_RS06995 AYM30_RS07000 SM00316 Ribosomal protein S1-like RNA-binding domain AYM30_RS07000 SM00322 K homology RNA-binding domain AYM30_RS07010 SM00849 Metallo-beta-lactamase superfamily AYM30_RS07015 SM00382 ATPases associated with a variety of cellular activities AYM30_RS07015 SM00843 AYM30_RS07015 AYM30_RS07020 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM30_RS07020 SM00866 AYM30_RS07020 AYM30_RS07045 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS07055 SM00852 Probable molybdopterin binding domain AYM30_RS07060 SM00382 ATPases associated with a variety of cellular activities AYM30_RS07065 SM00322 K homology RNA-binding domain AYM30_RS07065 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM30_RS07095 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM30_RS07110 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AYM30_RS07110 SM00534 ATPase domain of DNA mismatch repair MUTS family AYM30_RS07115 SM00853 MutL C terminal dimerisation domain AYM30_RS07115 SM01340 AYM30_RS07115 AYM30_RS07170 SM00422 helix_turn_helix, mercury resistance AYM30_RS07175 SM01230 AYM30_RS07175 AYM30_RS07285 SM00155 Phospholipase D. Active site motifs. AYM30_RS07290 SM00382 ATPases associated with a variety of cellular activities AYM30_RS07305 SM00421 helix_turn_helix, Lux Regulon AYM30_RS07305 SM00448 cheY-homologous receiver domain AYM30_RS07315 SM00318 Staphylococcal nuclease homologues AYM30_RS07370 SM01060 AYM30_RS07370 AYM30_RS07385 SM01240 AYM30_RS07385 AYM30_RS07415 SM00861 Transketolase, pyrimidine binding domain AYM30_RS07485 SM01207 AYM30_RS07485 AYM30_RS07490 SM00387 Histidine kinase-like ATPases AYM30_RS07490 SM00433 TopoisomeraseII AYM30_RS07495 SM00434 DNA Topoisomerase IV AYM30_RS07510 SM01061 CAT RNA binding domain AYM30_RS07615 SM00382 ATPases associated with a variety of cellular activities AYM30_RS07620 SM00382 ATPases associated with a variety of cellular activities AYM30_RS07655 SM00382 ATPases associated with a variety of cellular activities AYM30_RS07685 SM00382 ATPases associated with a variety of cellular activities AYM30_RS07700 SM00859 Semialdehyde dehydrogenase, NAD binding domain AYM30_RS07705 SM01130 AYM30_RS07705 AYM30_RS07725 SM01005 Alanine racemase, C-terminal domain AYM30_RS07740 SM00357 Cold shock protein domain AYM30_RS07780 SM00327 von Willebrand factor (vWF) type A domain AYM30_RS07805 SM00861 Transketolase, pyrimidine binding domain AYM30_RS07810 SM00387 Histidine kinase-like ATPases AYM30_RS07810 SM00388 His Kinase A (phosphoacceptor) domain AYM30_RS07815 SM00448 cheY-homologous receiver domain AYM30_RS07815 SM00862 Transcriptional regulatory protein, C terminal AYM30_RS07830 SM01321 AYM30_RS07830 AYM30_RS07835 SM00014 Acid phosphatase homologues AYM30_RS07850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYM30_RS07850 SM00245 tail specific protease AYM30_RS07895 SM00567 E-Z type HEAT repeats AYM30_RS07895 SM00932 Scaffold protein Nfu/NifU N terminal AYM30_RS07900 SM00932 Scaffold protein Nfu/NifU N terminal AYM30_RS07925 SM00844 GA module AYM30_RS07945 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AYM30_RS07945 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AYM30_RS07950 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AYM30_RS07950 SM00475 5'-3' exonuclease AYM30_RS07970 SM00981 AYM30_RS07970 AYM30_RS08015 SM00478 endonuclease III AYM30_RS08015 SM00525 AYM30_RS08015 AYM30_RS08030 SM00479 AYM30_RS08030 AYM30_RS08030 SM00491 AYM30_RS08030 AYM30_RS08065 SM00914 AYM30_RS08065 AYM30_RS08070 SM00028 Tetratricopeptide repeats AYM30_RS08095 SM00562 AYM30_RS08095 AYM30_RS08120 SM00411 bacterial (prokaryotic) histone like domain AYM30_RS08135 SM00316 Ribosomal protein S1-like RNA-binding domain AYM30_RS08160 SM00870 AYM30_RS08160 AYM30_RS08175 SM00257 Lysin motif AYM30_RS08180 SM00487 DEAD-like helicases superfamily AYM30_RS08180 SM00490 helicase superfamily c-terminal domain AYM30_RS08240 SM00287 Bacterial SH3 domain homologues AYM30_RS08240 SM00646 AYM30_RS08240 AYM30_RS08320 SM00635 Bacterial Ig-like domain 2 AYM30_RS08375 SM00507 HNH nucleases AYM30_RS08385 SM00487 DEAD-like helicases superfamily AYM30_RS08390 SM00990 AYM30_RS08390 AYM30_RS08475 SM00482 DNA polymerase A domain AYM30_RS08530 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS08535 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS08585 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYM30_RS08585 SM00387 Histidine kinase-like ATPases AYM30_RS08585 SM00388 His Kinase A (phosphoacceptor) domain AYM30_RS08590 SM00448 cheY-homologous receiver domain AYM30_RS08590 SM00862 Transcriptional regulatory protein, C terminal AYM30_RS08595 SM00363 S4 RNA-binding domain AYM30_RS08660 SM00342 helix_turn_helix, arabinose operon control protein AYM30_RS08660 SM00871 Bacterial transcription activator, effector binding domain AYM30_RS08665 SM00642 Alpha-amylase domain AYM30_RS08670 SM00354 helix_turn _helix lactose operon repressor AYM30_RS08685 SM01350 AYM30_RS08685 AYM30_RS08715 SM00861 Transketolase, pyrimidine binding domain AYM30_RS08765 SM00878 Biotin carboxylase C-terminal domain AYM30_RS08775 SM00841 Elongation factor P, C-terminal AYM30_RS08775 SM01185 AYM30_RS08775 AYM30_RS08800 SM00450 Rhodanese Homology Domain AYM30_RS08860 SM00849 Metallo-beta-lactamase superfamily AYM30_RS08915 SM00382 ATPases associated with a variety of cellular activities AYM30_RS08920 SM00518 AP endonuclease family 2 AYM30_RS08925 SM00487 DEAD-like helicases superfamily AYM30_RS08925 SM00490 helicase superfamily c-terminal domain AYM30_RS08945 SM00400 zinc finger AYM30_RS08945 SM00493 AYM30_RS08945 AYM30_RS08955 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM30_RS09015 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM30_RS09030 SM00271 DnaJ molecular chaperone homology domain AYM30_RS09050 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM30_RS09060 SM00838 Elongation factor G C-terminus AYM30_RS09075 SM00849 Metallo-beta-lactamase superfamily AYM30_RS09085 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM30_RS09100 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM30_RS09110 SM01103 AYM30_RS09110 AYM30_RS09160 SM00878 Biotin carboxylase C-terminal domain AYM30_RS09170 SM00797 Allophanate hydrolase subunit 2 AYM30_RS09175 SM00796 Allophanate hydrolase subunit 1 AYM30_RS09210 SM00732 Likely ribonuclease with RNase H fold. AYM30_RS09220 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AYM30_RS09225 SM00382 ATPases associated with a variety of cellular activities AYM30_RS09230 SM00028 Tetratricopeptide repeats AYM30_RS09270 SM00382 ATPases associated with a variety of cellular activities AYM30_RS09300 SM00287 Bacterial SH3 domain homologues AYM30_RS09300 SM00646 AYM30_RS09300 AYM30_RS09310 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM30_RS09310 SM00954 Region found in RelA / SpoT proteins AYM30_RS09330 SM01323 AYM30_RS09330 AYM30_RS09345 SM00382 ATPases associated with a variety of cellular activities AYM30_RS09350 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM30_RS09455 SM01004 Delta-aminolevulinic acid dehydratase AYM30_RS09485 SM00382 ATPases associated with a variety of cellular activities AYM30_RS09485 SM00994 ClpX C4-type zinc finger AYM30_RS09485 SM01086 C-terminal, D2-small domain, of ClpB protein AYM30_RS09535 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AYM30_RS09560 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYM30_RS09570 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AYM30_RS09570 SM01232 AYM30_RS09570 AYM30_RS09575 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AYM30_RS09575 SM00474 3'-5' exonuclease AYM30_RS09575 SM00475 5'-3' exonuclease AYM30_RS09575 SM00482 DNA polymerase A domain AYM30_RS09585 SM00387 Histidine kinase-like ATPases AYM30_RS09585 SM00388 His Kinase A (phosphoacceptor) domain AYM30_RS09590 SM00448 cheY-homologous receiver domain AYM30_RS09590 SM00862 Transcriptional regulatory protein, C terminal AYM30_RS09600 SM01329 AYM30_RS09600 AYM30_RS09640 SM00919 Malic enzyme, NAD binding domain AYM30_RS09640 SM01274 AYM30_RS09640 AYM30_RS09645 SM00481 DNA polymerase alpha chain like domain AYM30_RS09655 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM30_RS09665 SM00849 Metallo-beta-lactamase superfamily AYM30_RS09680 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AYM30_RS09680 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AYM30_RS09710 SM00981 AYM30_RS09710 AYM30_RS09730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AYM30_RS09735 SM00363 S4 RNA-binding domain AYM30_RS09735 SM01390 AYM30_RS09735 AYM30_RS09780 SM00563 Phosphate acyltransferases AYM30_RS09785 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYM30_RS09790 SM00363 S4 RNA-binding domain AYM30_RS09805 SM00725 NEAr Transporter domain AYM30_RS09830 SM00354 helix_turn _helix lactose operon repressor AYM30_RS09840 SM00830 Chorismate mutase type II AYM30_RS09865 SM00843 AYM30_RS09865 AYM30_RS09895 SM00849 Metallo-beta-lactamase superfamily AYM30_RS09935 SM00363 S4 RNA-binding domain AYM30_RS09955 SM00450 Rhodanese Homology Domain AYM30_RS09970 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM30_RS09980 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS10035 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYM30_RS10045 SM00226 Low molecular weight phosphatase family AYM30_RS10050 SM00047 Lysozyme subfamily 2 AYM30_RS10140 SM01234 AYM30_RS10140 AYM30_RS10160 SM00894 Excalibur calcium-binding domain AYM30_RS10300 SM00382 ATPases associated with a variety of cellular activities AYM30_RS10315 SM01260 AYM30_RS10315 AYM30_RS10445 SM00382 ATPases associated with a variety of cellular activities AYM30_RS10475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM30_RS10510 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS10515 SM00421 helix_turn_helix, Lux Regulon AYM30_RS10515 SM00448 cheY-homologous receiver domain AYM30_RS10570 SM00382 ATPases associated with a variety of cellular activities AYM30_RS10575 SM00062 Bacterial periplasmic substrate-binding proteins AYM30_RS10770 SM00382 ATPases associated with a variety of cellular activities AYM30_RS10780 SM00478 endonuclease III AYM30_RS10850 SM00226 Low molecular weight phosphatase family AYM30_RS10865 SM00421 helix_turn_helix, Lux Regulon AYM30_RS10865 SM00448 cheY-homologous receiver domain AYM30_RS10870 SM00387 Histidine kinase-like ATPases AYM30_RS10930 SM00479 AYM30_RS10930 AYM30_RS10950 SM00046 Diacylglycerol kinase catalytic domain (presumed) AYM30_RS10965 SM00845 GatB domain AYM30_RS10990 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM30_RS10990 SM00292 breast cancer carboxy-terminal domain AYM30_RS10990 SM00532 Ligase N family AYM30_RS11010 SM00998 Adenylosuccinate lyase C-terminus AYM30_RS11070 SM00710 Parallel beta-helix repeats AYM30_RS11080 SM01131 AYM30_RS11080 AYM30_RS11140 SM00382 ATPases associated with a variety of cellular activities AYM30_RS11150 SM00382 ATPases associated with a variety of cellular activities AYM30_RS11155 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM30_RS11215 SM00287 Bacterial SH3 domain homologues AYM30_RS11295 SM00635 Bacterial Ig-like domain 2 AYM30_RS11355 SM00507 HNH nucleases AYM30_RS11500 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS11510 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS11515 SM00479 AYM30_RS11515 AYM30_RS11615 SM00883 Chaperonin 10 Kd subunit AYM30_RS11650 SM00793 Accessory gene regulator B AYM30_RS11655 SM00794 Staphylococcal AgrD protein AYM30_RS11665 SM00448 cheY-homologous receiver domain AYM30_RS11665 SM00850 LytTr DNA-binding domain AYM30_RS11680 SM00640 Glycosyl hydrolases family 32 AYM30_RS11685 SM00354 helix_turn _helix lactose operon repressor AYM30_RS11705 SM00881 CoA binding domain AYM30_RS11710 SM00382 ATPases associated with a variety of cellular activities AYM30_RS11720 SM00534 ATPase domain of DNA mismatch repair MUTS family AYM30_RS11770 SM00917 LeuA allosteric (dimerisation) domain AYM30_RS11775 SM01329 AYM30_RS11775 AYM30_RS11835 SM00731 SprT homologues. AYM30_RS11840 SM00316 Ribosomal protein S1-like RNA-binding domain AYM30_RS11840 SM00732 Likely ribonuclease with RNase H fold. AYM30_RS11860 SM00331 Sigma factor PP2C-like phosphatases AYM30_RS11860 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AYM30_RS11880 SM01005 Alanine racemase, C-terminal domain AYM30_RS11925 SM00387 Histidine kinase-like ATPases AYM30_RS11925 SM00388 His Kinase A (phosphoacceptor) domain AYM30_RS11930 SM00448 cheY-homologous receiver domain AYM30_RS11930 SM00862 Transcriptional regulatory protein, C terminal AYM30_RS11935 SM00487 DEAD-like helicases superfamily AYM30_RS11935 SM00490 helicase superfamily c-terminal domain AYM30_RS11970 SM00155 Phospholipase D. Active site motifs. AYM30_RS11975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM30_RS12060 SM00382 ATPases associated with a variety of cellular activities AYM30_RS12120 SM00226 Low molecular weight phosphatase family AYM30_RS12135 SM00937 AYM30_RS12135 AYM30_RS12155 SM00357 Cold shock protein domain AYM30_RS12155 SM00382 ATPases associated with a variety of cellular activities AYM30_RS12155 SM00959 Rho termination factor, N-terminal domain AYM30_RS12230 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AYM30_RS12240 SM01133 AYM30_RS12240 AYM30_RS12280 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYM30_RS12320 SM00382 ATPases associated with a variety of cellular activities AYM30_RS12545 SM00829 Enoylreductase AYM30_RS12550 SM00829 Enoylreductase AYM30_RS12575 SM01133 AYM30_RS12575 AYM30_RS12590 SM00420 helix_turn_helix, Deoxyribose operon repressor AYM30_RS12590 SM01134 AYM30_RS12590 AYM30_RS12620 SM00422 helix_turn_helix, mercury resistance AYM30_RS12675 SM00382 ATPases associated with a variety of cellular activities AYM30_RS12715 SM00382 ATPases associated with a variety of cellular activities AYM30_RS12720 SM00382 ATPases associated with a variety of cellular activities AYM30_RS12730 SM00662 RNA polymerases D AYM30_RS12750 SM00316 Ribosomal protein S1-like RNA-binding domain AYM30_RS12805 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AYM30_RS12810 SM01374 AYM30_RS12810 AYM30_RS12830 SM00322 K homology RNA-binding domain AYM30_RS12845 SM01382 AYM30_RS12845 AYM30_RS12845 SM01383 AYM30_RS12845 AYM30_RS12865 SM01403 AYM30_RS12865 AYM30_RS12880 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AYM30_RS12880 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AYM30_RS12880 SM00493 AYM30_RS12880 AYM30_RS12940 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS12970 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM30_RS12995 SM00852 Probable molybdopterin binding domain AYM30_RS13005 SM00852 Probable molybdopterin binding domain AYM30_RS13015 SM00382 ATPases associated with a variety of cellular activities AYM30_RS13080 SM00988 UreE urease accessory protein, N-terminal domain AYM30_RS13120 SM00342 helix_turn_helix, arabinose operon control protein AYM30_RS13170 SM00047 Lysozyme subfamily 2 AYM30_RS13185 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AYM30_RS13185 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AYM30_RS13200 SM00420 helix_turn_helix, Deoxyribose operon repressor AYM30_RS13355 SM00382 ATPases associated with a variety of cellular activities AYM30_RS13445 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS13465 SM00382 ATPases associated with a variety of cellular activities AYM30_RS13475 SM00448 cheY-homologous receiver domain AYM30_RS13475 SM00862 Transcriptional regulatory protein, C terminal AYM30_RS13480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYM30_RS13480 SM00387 Histidine kinase-like ATPases AYM30_RS13480 SM00388 His Kinase A (phosphoacceptor) domain AYM30_RS13485 SM00850 LytTr DNA-binding domain AYM30_RS13520 SM00829 Enoylreductase AYM30_RS13575 SM00342 helix_turn_helix, arabinose operon control protein AYM30_RS13600 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS13625 SM00422 helix_turn_helix, mercury resistance AYM30_RS13630 SM00421 helix_turn_helix, Lux Regulon AYM30_RS13630 SM00448 cheY-homologous receiver domain AYM30_RS13635 SM00387 Histidine kinase-like ATPases AYM30_RS13660 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AYM30_RS13740 SM00382 ATPases associated with a variety of cellular activities AYM30_RS13750 SM00062 Bacterial periplasmic substrate-binding proteins AYM30_RS13750 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AYM30_RS13770 SM00855 Phosphoglycerate mutase family AYM30_RS13830 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM30_RS13830 SM00876 Biotin and Thiamin Synthesis associated domain AYM30_RS13855 SM00382 ATPases associated with a variety of cellular activities AYM30_RS13860 SM00382 ATPases associated with a variety of cellular activities AYM30_RS13900 SM00871 Bacterial transcription activator, effector binding domain AYM30_RS13980 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM30_RS13980 SM00382 ATPases associated with a variety of cellular activities AYM30_RS14030 SM00382 ATPases associated with a variety of cellular activities AYM30_RS14075 SM00382 ATPases associated with a variety of cellular activities AYM30_RS14080 SM00382 ATPases associated with a variety of cellular activities AYM30_RS14215 SM00487 DEAD-like helicases superfamily AYM30_RS14215 SM00490 helicase superfamily c-terminal domain AYM30_RS14305 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM30_RS14305 SM00895 AYM30_RS14305 AYM30_RS14310 SM00422 helix_turn_helix, mercury resistance AYM30_RS14315 SM00954 Region found in RelA / SpoT proteins AYM30_RS14350 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS14360 SM00382 ATPases associated with a variety of cellular activities AYM30_RS14390 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS14420 SM00382 ATPases associated with a variety of cellular activities AYM30_RS14555 SM00382 ATPases associated with a variety of cellular activities AYM30_RS14555 SM01086 C-terminal, D2-small domain, of ClpB protein AYM30_RS14570 SM00899 AYM30_RS14570 AYM30_RS14595 SM01266 AYM30_RS14595 AYM30_RS14800 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AYM30_RS14985 SM00382 ATPases associated with a variety of cellular activities AYM30_RS14990 SM00387 Histidine kinase-like ATPases AYM30_RS14995 SM00448 cheY-homologous receiver domain AYM30_RS14995 SM00862 Transcriptional regulatory protein, C terminal AYM30_RS15005 SM00098 Alkaline phosphatase homologues AYM30_RS15015 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM30_RS15100 SM00047 Lysozyme subfamily 2 AYM30_RS15125 SM00957 SecA DEAD-like domain AYM30_RS15125 SM00958 SecA preprotein cross-linking domain AYM30_RS15155 SM00903 Flavin reductase like domain AYM30_RS15175 SM00903 Flavin reductase like domain AYM30_RS15310 SM00382 ATPases associated with a variety of cellular activities AYM30_RS15325 SM00867 YceI-like domain AYM30_RS15335 SM00450 Rhodanese Homology Domain AYM30_RS15390 SM00382 ATPases associated with a variety of cellular activities AYM30_RS15425 SM00357 Cold shock protein domain AYM30_RS15430 SM00530 Helix-turn-helix XRE-family like proteins AYM30_RS15450 SM00470 ParB-like nuclease domain AYM30_RS15460 SM01228 AYM30_RS15460 AYM30_RS15490 SM00760 Bacterial dnaA protein helix-turn-helix domain