locus-tag class description AYM31_RS00005 PF00308 Bacterial dnaA protein AYM31_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix AYM31_RS00005 PF11638 DnaA N-terminal domain AYM31_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain AYM31_RS00010 PF02767 DNA polymerase III beta subunit, central domain AYM31_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain AYM31_RS00020 PF02463 RecF/RecN/SMC N terminal domain AYM31_RS00025 PF00204 DNA gyrase B AYM31_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus AYM31_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS00025 PF01751 Toprim domain AYM31_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A AYM31_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller AYM31_RS00035 PF01256 Carbohydrate kinase AYM31_RS00040 PF00221 Aromatic amino acid lyase AYM31_RS00050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYM31_RS00050 PF02403 Seryl-tRNA synthetase N-terminal domain AYM31_RS00065 PF00561 alpha/beta hydrolase fold AYM31_RS00075 PF02272 DHHA1 domain AYM31_RS00075 PF01368 DHH family AYM31_RS00080 PF03948 Ribosomal protein L9, C-terminal domain AYM31_RS00080 PF01281 Ribosomal protein L9, N-terminal domain AYM31_RS00085 PF03796 DnaB-like helicase C terminal domain AYM31_RS00085 PF00772 DnaB-like helicase N terminal domain AYM31_RS00095 PF00709 Adenylosuccinate synthetase AYM31_RS00110 PF00072 Response regulator receiver domain AYM31_RS00110 PF00486 Transcriptional regulatory protein, C terminal AYM31_RS00115 PF13426 PAS domain AYM31_RS00115 PF00512 His Kinase A (phospho-acceptor) domain AYM31_RS00115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS00115 PF00672 HAMP domain AYM31_RS00120 PF07435 YycH protein AYM31_RS00130 PF00753 Metallo-beta-lactamase superfamily AYM31_RS00135 PF00149 Calcineurin-like phosphoesterase AYM31_RS00135 PF02872 5'-nucleotidase, C-terminal domain AYM31_RS00140 PF02590 Predicted SPOUT methyltransferase AYM31_RS00150 PF13610 DDE domain AYM31_RS00155 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AYM31_RS00155 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AYM31_RS00165 PF03009 Glycerophosphoryl diester phosphodiesterase family AYM31_RS00170 PF01575 MaoC like domain AYM31_RS00175 PF03717 Penicillin-binding Protein dimerisation domain AYM31_RS00175 PF00905 Penicillin binding protein transpeptidase domain AYM31_RS00175 PF05223 NTF2-like N-terminal transpeptidase domain AYM31_RS00180 PF05569 BlaR1 peptidase M56 AYM31_RS00180 PF00905 Penicillin binding protein transpeptidase domain AYM31_RS00235 PF00270 DEAD/DEAH box helicase AYM31_RS00235 PF13749 Putative ATP-dependent DNA helicase recG C-terminal AYM31_RS00235 PF17191 RecG wedge domain AYM31_RS00290 PF13302 Acetyltransferase (GNAT) domain AYM31_RS00295 PF08240 Alcohol dehydrogenase GroES-like domain AYM31_RS00295 PF00107 Zinc-binding dehydrogenase AYM31_RS00330 PF00696 Amino acid kinase family AYM31_RS00335 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYM31_RS00335 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYM31_RS00340 PF00027 Cyclic nucleotide-binding domain AYM31_RS00345 PF13520 Amino acid permease AYM31_RS00355 PF01316 Arginine repressor, DNA binding domain AYM31_RS00355 PF02863 Arginine repressor, C-terminal domain AYM31_RS00365 PF00403 Heavy-metal-associated domain AYM31_RS00375 PF12697 Alpha/beta hydrolase family AYM31_RS00390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYM31_RS00395 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS00400 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS00405 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYM31_RS00405 PF00005 ABC transporter AYM31_RS00410 PF00005 ABC transporter AYM31_RS00420 PF07563 Protein of unknown function (DUF1541) AYM31_RS00440 PF01207 Dihydrouridine synthase (Dus) AYM31_RS00450 PF01925 Sulfite exporter TauE/SafE AYM31_RS00455 PF02583 Metal-sensitive transcriptional repressor AYM31_RS00460 PF13686 DsrE/DsrF/DrsH-like family AYM31_RS00465 PF00753 Metallo-beta-lactamase superfamily AYM31_RS00490 PF01207 Dihydrouridine synthase (Dus) AYM31_RS00510 PF03358 NADPH-dependent FMN reductase AYM31_RS00525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYM31_RS00525 PF03466 LysR substrate binding domain AYM31_RS00545 PF00388 Phosphatidylinositol-specific phospholipase C, X domain AYM31_RS00550 PF04507 Csa1 family AYM31_RS00555 PF04507 Csa1 family AYM31_RS00560 PF04507 Csa1 family AYM31_RS00565 PF04507 Csa1 family AYM31_RS00570 PF12833 Helix-turn-helix domain AYM31_RS00575 PF01546 Peptidase family M20/M25/M40 AYM31_RS00575 PF07687 Peptidase dimerisation domain AYM31_RS00580 PF07690 Major Facilitator Superfamily AYM31_RS00585 PF02690 Na+/Pi-cotransporter AYM31_RS00590 PF06100 MCRA family AYM31_RS00595 PF00892 EamA-like transporter family AYM31_RS00600 PF00155 Aminotransferase class I and II AYM31_RS00600 PF00392 Bacterial regulatory proteins, gntR family AYM31_RS00610 PF02652 L-lactate permease AYM31_RS00615 PF03373 Octapeptide repeat AYM31_RS00615 PF04650 YSIRK type signal peptide AYM31_RS00615 PF02216 B domain AYM31_RS00615 PF00746 LPXTG cell wall anchor motif AYM31_RS00615 PF01476 LysM domain AYM31_RS00630 PF01032 FecCD transport family AYM31_RS00635 PF01032 FecCD transport family AYM31_RS00640 PF01497 Periplasmic binding protein AYM31_RS00645 PF00291 Pyridoxal-phosphate dependent enzyme AYM31_RS00650 PF02423 Ornithine cyclodeaminase/mu-crystallin family AYM31_RS00655 PF06276 Ferric iron reductase FhuF-like transporter AYM31_RS00655 PF04183 IucA / IucC family AYM31_RS00660 PF00083 Sugar (and other) transporter AYM31_RS00660 PF07690 Major Facilitator Superfamily AYM31_RS00665 PF04183 IucA / IucC family AYM31_RS00665 PF06276 Ferric iron reductase FhuF-like transporter AYM31_RS00670 PF06276 Ferric iron reductase FhuF-like transporter AYM31_RS00670 PF04183 IucA / IucC family AYM31_RS00675 PF03328 HpcH/HpaI aldolase/citrate lyase family AYM31_RS00680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AYM31_RS00680 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AYM31_RS00685 PF02195 ParB-like nuclease domain AYM31_RS00715 PF01370 NAD dependent epimerase/dehydratase family AYM31_RS00720 PF02397 Bacterial sugar transferase AYM31_RS00725 PF00534 Glycosyl transferases group 1 AYM31_RS00740 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AYM31_RS00740 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AYM31_RS00750 PF07702 UTRA domain AYM31_RS00750 PF00392 Bacterial regulatory proteins, gntR family AYM31_RS00755 PF01048 Phosphorylase superfamily AYM31_RS00760 PF07690 Major Facilitator Superfamily AYM31_RS00765 PF01791 DeoC/LacD family aldolase AYM31_RS00770 PF01676 Metalloenzyme superfamily AYM31_RS00775 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS00780 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS00785 PF00005 ABC transporter AYM31_RS00800 PF00149 Calcineurin-like phosphoesterase AYM31_RS00800 PF02872 5'-nucleotidase, C-terminal domain AYM31_RS00810 PF02486 Replication initiation factor AYM31_RS00815 PF02486 Replication initiation factor AYM31_RS00835 PF01797 Transposase IS200 like AYM31_RS00840 PF01797 Transposase IS200 like AYM31_RS00845 PF00171 Aldehyde dehydrogenase family AYM31_RS00845 PF00465 Iron-containing alcohol dehydrogenase AYM31_RS00850 PF02706 Chain length determinant protein AYM31_RS00855 PF13614 AAA domain AYM31_RS00870 PF08485 Polysaccharide biosynthesis protein C-terminal AYM31_RS00870 PF02719 Polysaccharide biosynthesis protein AYM31_RS00875 PF01370 NAD dependent epimerase/dehydratase family AYM31_RS00880 PF02350 UDP-N-acetylglucosamine 2-epimerase AYM31_RS00885 PF00132 Bacterial transferase hexapeptide (six repeats) AYM31_RS00910 PF02397 Bacterial sugar transferase AYM31_RS00920 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AYM31_RS00920 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AYM31_RS00920 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AYM31_RS00925 PF02350 UDP-N-acetylglucosamine 2-epimerase AYM31_RS00930 PF03992 Antibiotic biosynthesis monooxygenase AYM31_RS00935 PF04304 Protein of unknown function (DUF454) AYM31_RS00940 PF00171 Aldehyde dehydrogenase family AYM31_RS00945 PF01545 Cation efflux family AYM31_RS00945 PF16916 Dimerisation domain of Zinc Transporter AYM31_RS00960 PF00005 ABC transporter AYM31_RS00970 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS00975 PF02770 Acyl-CoA dehydrogenase, middle domain AYM31_RS00975 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYM31_RS00975 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYM31_RS00980 PF10057 Uncharacterized conserved protein (DUF2294) AYM31_RS00985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYM31_RS00985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYM31_RS00995 PF00501 AMP-binding enzyme AYM31_RS00995 PF13193 AMP-binding enzyme C-terminal domain AYM31_RS00995 PF00668 Condensation domain AYM31_RS00995 PF00975 Thioesterase domain AYM31_RS00995 PF00550 Phosphopantetheine attachment site AYM31_RS01010 PF00696 Amino acid kinase family AYM31_RS01015 PF01960 ArgJ family AYM31_RS01020 PF02774 Semialdehyde dehydrogenase, dimerisation domain AYM31_RS01020 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYM31_RS01025 PF00202 Aminotransferase class-III AYM31_RS01030 PF05525 Branched-chain amino acid transport protein AYM31_RS01035 PF00857 Isochorismatase family AYM31_RS01040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYM31_RS01040 PF00205 Thiamine pyrophosphate enzyme, central domain AYM31_RS01040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYM31_RS01050 PF00367 phosphotransferase system, EIIB AYM31_RS01050 PF02378 Phosphotransferase system, EIIC AYM31_RS01050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AYM31_RS01065 PF02378 Phosphotransferase system, EIIC AYM31_RS01065 PF00367 phosphotransferase system, EIIB AYM31_RS01070 PF01380 SIS domain AYM31_RS01070 PF01418 Helix-turn-helix domain, rpiR family AYM31_RS01080 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AYM31_RS01080 PF18766 SWI2/SNF2 ATPase AYM31_RS01080 PF12008 Type I restriction and modification enzyme - subunit R C terminal AYM31_RS01100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYM31_RS01100 PF00005 ABC transporter AYM31_RS01105 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS01110 PF12911 N-terminal TM domain of oligopeptide transport permease C AYM31_RS01110 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS01125 PF04507 Csa1 family AYM31_RS01130 PF02525 Flavodoxin-like fold AYM31_RS01135 PF08460 Bacterial SH3 domain AYM31_RS01135 PF01551 Peptidase family M23 AYM31_RS01140 PF17912 MalK OB fold domain AYM31_RS01140 PF03459 TOBE domain AYM31_RS01140 PF00005 ABC transporter AYM31_RS01150 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS01155 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS01160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AYM31_RS01160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AYM31_RS01165 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AYM31_RS01165 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AYM31_RS01175 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family AYM31_RS01180 PF07690 Major Facilitator Superfamily AYM31_RS01185 PF00072 Response regulator receiver domain AYM31_RS01185 PF12833 Helix-turn-helix domain AYM31_RS01190 PF06580 Histidine kinase AYM31_RS01200 PF02901 Pyruvate formate lyase-like AYM31_RS01200 PF01228 Glycine radical AYM31_RS01205 PF04055 Radical SAM superfamily AYM31_RS01225 PF08764 Staphylococcus aureus coagulase AYM31_RS01225 PF04022 Staphylocoagulase repeat AYM31_RS01235 PF00108 Thiolase, N-terminal domain AYM31_RS01235 PF02803 Thiolase, C-terminal domain AYM31_RS01240 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AYM31_RS01240 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AYM31_RS01245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYM31_RS01245 PF02770 Acyl-CoA dehydrogenase, middle domain AYM31_RS01245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AYM31_RS01250 PF00501 AMP-binding enzyme AYM31_RS01250 PF13193 AMP-binding enzyme C-terminal domain AYM31_RS01255 PF01144 Coenzyme A transferase AYM31_RS01265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYM31_RS01270 PF04343 Protein of unknown function, DUF488 AYM31_RS01280 PF00970 Oxidoreductase FAD-binding domain AYM31_RS01280 PF00175 Oxidoreductase NAD-binding domain AYM31_RS01280 PF00042 Globin AYM31_RS01290 PF00056 lactate/malate dehydrogenase, NAD binding domain AYM31_RS01290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AYM31_RS01300 PF00367 phosphotransferase system, EIIB AYM31_RS01300 PF02378 Phosphotransferase system, EIIC AYM31_RS01300 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AYM31_RS01305 PF01156 Inosine-uridine preferring nucleoside hydrolase AYM31_RS01325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYM31_RS01330 PF03611 PTS system sugar-specific permease component AYM31_RS01335 PF00107 Zinc-binding dehydrogenase AYM31_RS01335 PF08240 Alcohol dehydrogenase GroES-like domain AYM31_RS01345 PF08240 Alcohol dehydrogenase GroES-like domain AYM31_RS01345 PF00107 Zinc-binding dehydrogenase AYM31_RS01350 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AYM31_RS01355 PF00107 Zinc-binding dehydrogenase AYM31_RS01355 PF08240 Alcohol dehydrogenase GroES-like domain AYM31_RS01360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AYM31_RS01365 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AYM31_RS01370 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AYM31_RS01375 PF00107 Zinc-binding dehydrogenase AYM31_RS01375 PF08240 Alcohol dehydrogenase GroES-like domain AYM31_RS01380 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AYM31_RS01385 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 AYM31_RS01385 PF00535 Glycosyl transferase family 2 AYM31_RS01390 PF01814 Hemerythrin HHE cation binding domain AYM31_RS01390 PF04405 Domain of Unknown function (DUF542) AYM31_RS01395 PF07694 5TMR of 5TMR-LYT AYM31_RS01395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS01395 PF06580 Histidine kinase AYM31_RS01400 PF04397 LytTr DNA-binding domain AYM31_RS01400 PF00072 Response regulator receiver domain AYM31_RS01405 PF03788 LrgA family AYM31_RS01410 PF04172 LrgB-like family AYM31_RS01415 PF00155 Aminotransferase class I and II AYM31_RS01415 PF00392 Bacterial regulatory proteins, gntR family AYM31_RS01425 PF00367 phosphotransferase system, EIIB AYM31_RS01425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AYM31_RS01425 PF02378 Phosphotransferase system, EIIC AYM31_RS01430 PF00232 Glycosyl hydrolase family 1 AYM31_RS01440 PF13649 Methyltransferase domain AYM31_RS01450 PF00294 pfkB family carbohydrate kinase AYM31_RS01455 PF05025 RbsD / FucU transport protein family AYM31_RS01460 PF06800 Sugar transport protein AYM31_RS01465 PF00356 Bacterial regulatory proteins, lacI family AYM31_RS01465 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AYM31_RS01485 PF07690 Major Facilitator Superfamily AYM31_RS01490 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family AYM31_RS01495 PF01551 Peptidase family M23 AYM31_RS01500 PF00005 ABC transporter AYM31_RS01530 PF01476 LysM domain AYM31_RS01530 PF05257 CHAP domain AYM31_RS01535 PF06013 Proteins of 100 residues with WXG AYM31_RS01545 PF10661 WXG100 protein secretion system (Wss), protein EssA AYM31_RS01550 PF08817 WXG100 protein secretion system (Wss), protein YukD AYM31_RS01555 PF10140 WXG100 protein secretion system (Wss), protein YukC AYM31_RS01560 PF01580 FtsK/SpoIIIE family AYM31_RS01560 PF12538 DNA transporter AYM31_RS01570 PF06013 Proteins of 100 residues with WXG AYM31_RS01575 PF16887 Domain of unknown function (DUF5081) AYM31_RS01585 PF14449 Pre-toxin TG AYM31_RS01590 PF04634 Protein of unknown function, DUF600 AYM31_RS01610 PF04634 Protein of unknown function, DUF600 AYM31_RS01615 PF04634 Protein of unknown function, DUF600 AYM31_RS01625 PF04634 Protein of unknown function, DUF600 AYM31_RS01635 PF04634 Protein of unknown function, DUF600 AYM31_RS01640 PF04634 Protein of unknown function, DUF600 AYM31_RS01645 PF04634 Protein of unknown function, DUF600 AYM31_RS01650 PF04634 Protein of unknown function, DUF600 AYM31_RS01655 PF04634 Protein of unknown function, DUF600 AYM31_RS01675 PF05525 Branched-chain amino acid transport protein AYM31_RS01685 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AYM31_RS01695 PF02687 FtsX-like permease family AYM31_RS01700 PF00005 ABC transporter AYM31_RS01720 PF04227 Indigoidine synthase A like protein AYM31_RS01725 PF07662 Na+ dependent nucleoside transporter C-terminus AYM31_RS01725 PF01773 Na+ dependent nucleoside transporter N-terminus AYM31_RS01730 PF00474 Sodium:solute symporter family AYM31_RS01735 PF00701 Dihydrodipicolinate synthetase family AYM31_RS01740 PF00480 ROK family AYM31_RS01745 PF01380 SIS domain AYM31_RS01745 PF01418 Helix-turn-helix domain, rpiR family AYM31_RS01750 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AYM31_RS01755 PF07670 Nucleoside recognition AYM31_RS01760 PF04650 YSIRK type signal peptide AYM31_RS01770 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYM31_RS01780 PF00296 Luciferase-like monooxygenase AYM31_RS01785 PF01597 Glycine cleavage H-protein AYM31_RS01790 PF01661 Macro domain AYM31_RS01800 PF10437 Bacterial lipoate protein ligase C-terminus AYM31_RS01800 PF03099 Biotin/lipoate A/B protein ligase family AYM31_RS01810 PF03611 PTS system sugar-specific permease component AYM31_RS01820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYM31_RS01825 PF03123 CAT RNA binding domain AYM31_RS01825 PF00874 PRD domain AYM31_RS01840 PF01554 MatE AYM31_RS01850 PF07690 Major Facilitator Superfamily AYM31_RS01855 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYM31_RS01860 PF00296 Luciferase-like monooxygenase AYM31_RS01865 PF03358 NADPH-dependent FMN reductase AYM31_RS01870 PF03601 Conserved hypothetical protein 698 AYM31_RS01880 PF13302 Acetyltransferase (GNAT) domain AYM31_RS01885 PF09375 Imelysin AYM31_RS01890 PF04261 Dyp-type peroxidase family AYM31_RS01895 PF03239 Iron permease FTR1 family AYM31_RS01900 PF00902 Sec-independent protein translocase protein (TatC) AYM31_RS01905 PF02416 mttA/Hcf106 family AYM31_RS01915 PF01381 Helix-turn-helix AYM31_RS01925 PF00005 ABC transporter AYM31_RS01940 PF00108 Thiolase, N-terminal domain AYM31_RS01940 PF02803 Thiolase, C-terminal domain AYM31_RS01950 PF08267 Cobalamin-independent synthase, N-terminal domain AYM31_RS01950 PF01717 Cobalamin-independent synthase, Catalytic domain AYM31_RS01955 PF02219 Methylenetetrahydrofolate reductase AYM31_RS01955 PF02574 Homocysteine S-methyltransferase AYM31_RS01960 PF01053 Cys/Met metabolism PLP-dependent enzyme AYM31_RS01965 PF01053 Cys/Met metabolism PLP-dependent enzyme AYM31_RS01975 PF17762 HTH domain found in ParB protein AYM31_RS01975 PF02195 ParB-like nuclease domain AYM31_RS01980 PF00924 Mechanosensitive ion channel AYM31_RS01985 PF06107 Bacterial protein of unknown function (DUF951) AYM31_RS01990 PF01926 50S ribosome-binding GTPase AYM31_RS01990 PF06071 Protein of unknown function (DUF933) AYM31_RS02005 PF01250 Ribosomal protein S6 AYM31_RS02010 PF00436 Single-strand binding protein family AYM31_RS02015 PF01084 Ribosomal protein S18 AYM31_RS02025 PF00589 Phage integrase family AYM31_RS02025 PF02899 Phage integrase, N-terminal SAM-like domain AYM31_RS02035 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02085 PF13192 Thioredoxin domain AYM31_RS02085 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS02090 PF10417 C-terminal domain of 1-Cys peroxiredoxin AYM31_RS02090 PF00578 AhpC/TSA family AYM31_RS02095 PF00881 Nitroreductase family AYM31_RS02100 PF00375 Sodium:dicarboxylate symporter family AYM31_RS02125 PF11181 Heat induced stress protein YflT AYM31_RS02135 PF00860 Permease family AYM31_RS02140 PF00571 CBS domain AYM31_RS02140 PF00478 IMP dehydrogenase / GMP reductase domain AYM31_RS02145 PF00117 Glutamine amidotransferase class-I AYM31_RS02145 PF00958 GMP synthase C terminal domain AYM31_RS02175 PF06993 Protein of unknown function (DUF1304) AYM31_RS02185 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02185 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02190 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02190 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02195 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02195 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02205 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02205 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02210 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02210 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02220 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02220 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02220 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02220 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02230 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02230 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02235 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02235 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02240 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02240 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02245 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS02245 PF09199 Staphylococcal superantigen-like OB-fold domain AYM31_RS02255 PF02384 N-6 DNA Methylase AYM31_RS02255 PF12161 HsdM N-terminal domain AYM31_RS02280 PF04507 Csa1 family AYM31_RS02285 PF04507 Csa1 family AYM31_RS02295 PF04507 Csa1 family AYM31_RS02300 PF04507 Csa1 family AYM31_RS02305 PF04507 Csa1 family AYM31_RS02310 PF04507 Csa1 family AYM31_RS02315 PF04507 Csa1 family AYM31_RS02320 PF04507 Csa1 family AYM31_RS02325 PF04507 Csa1 family AYM31_RS02350 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYM31_RS02350 PF07683 Cobalamin synthesis protein cobW C-terminal domain AYM31_RS02365 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AYM31_RS02365 PF00361 Proton-conducting membrane transporter AYM31_RS02370 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) AYM31_RS02375 PF10057 Uncharacterized conserved protein (DUF2294) AYM31_RS02390 PF12146 Serine aminopeptidase, S33 AYM31_RS02400 PF00209 Sodium:neurotransmitter symporter family AYM31_RS02405 PF00291 Pyridoxal-phosphate dependent enzyme AYM31_RS02410 PF01053 Cys/Met metabolism PLP-dependent enzyme AYM31_RS02415 PF00005 ABC transporter AYM31_RS02415 PF09383 NIL domain AYM31_RS02420 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS02425 PF03180 NLPA lipoprotein AYM31_RS02430 PF01476 LysM domain AYM31_RS02430 PF05257 CHAP domain AYM31_RS02460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYM31_RS02460 PF03466 LysR substrate binding domain AYM31_RS02465 PF01645 Conserved region in glutamate synthase AYM31_RS02465 PF04898 Glutamate synthase central domain AYM31_RS02465 PF01493 GXGXG motif AYM31_RS02465 PF00310 Glutamine amidotransferases class-II AYM31_RS02470 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AYM31_RS02470 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS02480 PF02378 Phosphotransferase system, EIIC AYM31_RS02480 PF00367 phosphotransferase system, EIIB AYM31_RS02485 PF16657 Maltogenic Amylase, C-terminal domain AYM31_RS02485 PF00128 Alpha amylase, catalytic domain AYM31_RS02490 PF07702 UTRA domain AYM31_RS02490 PF00392 Bacterial regulatory proteins, gntR family AYM31_RS02510 PF12169 DNA polymerase III subunits gamma and tau domain III AYM31_RS02515 PF02575 YbaB/EbfC DNA-binding family AYM31_RS02520 PF02132 RecR protein AYM31_RS02520 PF13662 Toprim domain AYM31_RS02550 PF01276 Orn/Lys/Arg decarboxylase, major domain AYM31_RS02550 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AYM31_RS02555 PF02223 Thymidylate kinase AYM31_RS02560 PF06153 Cyclic-di-AMP receptor AYM31_RS02565 PF09115 DNA polymerase III, delta subunit, C terminal AYM31_RS02570 PF04468 PSP1 C-terminal conserved region AYM31_RS02575 PF06156 Initiation control protein YabA AYM31_RS02580 PF05175 Methyltransferase small domain AYM31_RS02585 PF01541 GIY-YIG catalytic domain AYM31_RS02590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYM31_RS02595 PF01588 Putative tRNA binding domain AYM31_RS02595 PF09334 tRNA synthetases class I (M) AYM31_RS02595 PF08264 Anticodon-binding domain of tRNA AYM31_RS02600 PF01026 TatD related DNase AYM31_RS02605 PF01751 Toprim domain AYM31_RS02605 PF13331 Domain of unknown function (DUF4093) AYM31_RS02610 PF00398 Ribosomal RNA adenine dimethylase AYM31_RS02615 PF06257 Biofilm formation stimulator VEG AYM31_RS02620 PF00288 GHMP kinases N terminal domain AYM31_RS02620 PF08544 GHMP kinases C terminal AYM31_RS02625 PF00156 Phosphoribosyl transferase domain AYM31_RS02625 PF09182 Bacterial purine repressor, N-terminal AYM31_RS02630 PF01042 Endoribonuclease L-PSP AYM31_RS02635 PF04026 SpoVG AYM31_RS02645 PF00132 Bacterial transferase hexapeptide (six repeats) AYM31_RS02645 PF00483 Nucleotidyl transferase AYM31_RS02650 PF14572 Phosphoribosyl synthetase-associated domain AYM31_RS02650 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AYM31_RS02660 PF14693 Ribosomal protein TL5, C-terminal domain AYM31_RS02660 PF01386 Ribosomal L25p family AYM31_RS02665 PF01195 Peptidyl-tRNA hydrolase AYM31_RS02670 PF02559 CarD-like/TRCF domain AYM31_RS02670 PF00271 Helicase conserved C-terminal domain AYM31_RS02670 PF17757 UvrB interaction domain AYM31_RS02670 PF00270 DEAD/DEAH box helicase AYM31_RS02670 PF03461 TRCF domain AYM31_RS02675 PF01943 Polysaccharide biosynthesis protein AYM31_RS02675 PF14667 Polysaccharide biosynthesis C-terminal domain AYM31_RS02680 PF03819 MazG nucleotide pyrophosphohydrolase domain AYM31_RS02680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYM31_RS02685 PF01479 S4 domain AYM31_RS02695 PF00575 S1 RNA binding domain AYM31_RS02700 PF01171 PP-loop family AYM31_RS02700 PF11734 TilS substrate C-terminal domain AYM31_RS02705 PF00156 Phosphoribosyl transferase domain AYM31_RS02710 PF17862 AAA+ lid domain AYM31_RS02710 PF01434 Peptidase family M41 AYM31_RS02710 PF06480 FtsH Extracellular AYM31_RS02710 PF00004 ATPase family associated with various cellular activities (AAA) AYM31_RS02715 PF01430 Hsp33 protein AYM31_RS02720 PF00291 Pyridoxal-phosphate dependent enzyme AYM31_RS02725 PF00809 Pterin binding enzyme AYM31_RS02730 PF02152 Dihydroneopterin aldolase AYM31_RS02735 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AYM31_RS02745 PF01336 OB-fold nucleic acid binding domain AYM31_RS02745 PF00152 tRNA synthetases class II (D, K and N) AYM31_RS02815 PF00392 Bacterial regulatory proteins, gntR family AYM31_RS02815 PF00155 Aminotransferase class I and II AYM31_RS02820 PF01680 SOR/SNZ family AYM31_RS02825 PF01174 SNO glutamine amidotransferase family AYM31_RS02830 PF01773 Na+ dependent nucleoside transporter N-terminus AYM31_RS02830 PF07662 Na+ dependent nucleoside transporter C-terminus AYM31_RS02835 PF17727 CtsR C-terminal dimerization domain AYM31_RS02835 PF05848 CtsR N-terminal HTH domain AYM31_RS02840 PF02151 UvrB/uvrC motif AYM31_RS02845 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain AYM31_RS02850 PF02861 Clp amino terminal domain, pathogenicity island component AYM31_RS02850 PF00004 ATPase family associated with various cellular activities (AAA) AYM31_RS02850 PF07724 AAA domain (Cdc48 subfamily) AYM31_RS02850 PF10431 C-terminal, D2-small domain, of ClpB protein AYM31_RS02850 PF17871 AAA lid domain AYM31_RS02855 PF18073 Rubredoxin metal binding domain AYM31_RS02865 PF00749 tRNA synthetases class I (E and Q), catalytic domain AYM31_RS02875 PF00132 Bacterial transferase hexapeptide (six repeats) AYM31_RS02880 PF01406 tRNA synthetases class I (C) catalytic domain AYM31_RS02880 PF09190 DALR domain AYM31_RS02885 PF00636 Ribonuclease III domain AYM31_RS02890 PF00588 SpoU rRNA Methylase family AYM31_RS02890 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYM31_RS02905 PF00471 Ribosomal protein L33 AYM31_RS02910 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AYM31_RS02915 PF02357 Transcription termination factor nusG AYM31_RS02915 PF00467 KOW motif AYM31_RS02920 PF00298 Ribosomal protein L11, RNA binding domain AYM31_RS02920 PF03946 Ribosomal protein L11, N-terminal domain AYM31_RS02925 PF00687 Ribosomal protein L1p/L10e family AYM31_RS02930 PF00466 Ribosomal protein L10 AYM31_RS02935 PF16320 Ribosomal protein L7/L12 dimerisation domain AYM31_RS02935 PF00542 Ribosomal protein L7/L12 C-terminal domain AYM31_RS02940 PF05175 Methyltransferase small domain AYM31_RS02945 PF04561 RNA polymerase Rpb2, domain 2 AYM31_RS02945 PF04565 RNA polymerase Rpb2, domain 3 AYM31_RS02945 PF04560 RNA polymerase Rpb2, domain 7 AYM31_RS02945 PF04563 RNA polymerase beta subunit AYM31_RS02945 PF10385 RNA polymerase beta subunit external 1 domain AYM31_RS02945 PF00562 RNA polymerase Rpb2, domain 6 AYM31_RS02950 PF05000 RNA polymerase Rpb1, domain 4 AYM31_RS02950 PF04998 RNA polymerase Rpb1, domain 5 AYM31_RS02950 PF00623 RNA polymerase Rpb1, domain 2 AYM31_RS02950 PF04997 RNA polymerase Rpb1, domain 1 AYM31_RS02950 PF04983 RNA polymerase Rpb1, domain 3 AYM31_RS02955 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AYM31_RS02960 PF00164 Ribosomal protein S12/S23 AYM31_RS02965 PF00177 Ribosomal protein S7p/S5e AYM31_RS02970 PF14492 Elongation Factor G, domain II AYM31_RS02970 PF03764 Elongation factor G, domain IV AYM31_RS02970 PF03144 Elongation factor Tu domain 2 AYM31_RS02970 PF00009 Elongation factor Tu GTP binding domain AYM31_RS02970 PF00679 Elongation factor G C-terminus AYM31_RS02975 PF00009 Elongation factor Tu GTP binding domain AYM31_RS02975 PF03143 Elongation factor Tu C-terminal domain AYM31_RS02975 PF03144 Elongation factor Tu domain 2 AYM31_RS02980 PF01546 Peptidase family M20/M25/M40 AYM31_RS02980 PF07687 Peptidase dimerisation domain AYM31_RS02985 PF00155 Aminotransferase class I and II AYM31_RS02990 PF01965 DJ-1/PfpI family AYM31_RS02995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AYM31_RS02995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AYM31_RS03000 PF01370 NAD dependent epimerase/dehydratase family AYM31_RS03005 PF01063 Amino-transferase class IV AYM31_RS03020 PF01712 Deoxynucleoside kinase AYM31_RS03025 PF01712 Deoxynucleoside kinase AYM31_RS03030 PF14437 MafB19-like deaminase AYM31_RS03040 PF03358 NADPH-dependent FMN reductase AYM31_RS03050 PF00746 LPXTG cell wall anchor motif AYM31_RS03050 PF04650 YSIRK type signal peptide AYM31_RS03050 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AYM31_RS03050 PF17210 SdrD B-like domain AYM31_RS03050 PF17961 Bacterial Ig domain AYM31_RS03055 PF00746 LPXTG cell wall anchor motif AYM31_RS03055 PF17210 SdrD B-like domain AYM31_RS03055 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AYM31_RS03055 PF17961 Bacterial Ig domain AYM31_RS03055 PF04650 YSIRK type signal peptide AYM31_RS03060 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AYM31_RS03060 PF17961 Bacterial Ig domain AYM31_RS03060 PF04650 YSIRK type signal peptide AYM31_RS03060 PF17210 SdrD B-like domain AYM31_RS03060 PF00746 LPXTG cell wall anchor motif AYM31_RS03065 PF00534 Glycosyl transferases group 1 AYM31_RS03075 PF02649 Type I GTP cyclohydrolase folE2 AYM31_RS03080 PF02585 GlcNAc-PI de-N-acetylase AYM31_RS03090 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AYM31_RS03095 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AYM31_RS03100 PF01380 SIS domain AYM31_RS03110 PF07690 Major Facilitator Superfamily AYM31_RS03120 PF00501 AMP-binding enzyme AYM31_RS03120 PF13193 AMP-binding enzyme C-terminal domain AYM31_RS03125 PF02803 Thiolase, C-terminal domain AYM31_RS03125 PF00108 Thiolase, N-terminal domain AYM31_RS03140 PF17412 Family of unknown function AYM31_RS03145 PF08543 Phosphomethylpyrimidine kinase AYM31_RS03150 PF03167 Uracil DNA glycosylase superfamily AYM31_RS03160 PF04241 Protein of unknown function (DUF423) AYM31_RS03185 PF06778 Chlorite dismutase AYM31_RS03190 PF01515 Phosphate acetyl/butaryl transferase AYM31_RS03195 PF03099 Biotin/lipoate A/B protein ligase family AYM31_RS03200 PF00288 GHMP kinases N terminal domain AYM31_RS03200 PF08544 GHMP kinases C terminal AYM31_RS03210 PF00288 GHMP kinases N terminal domain AYM31_RS03210 PF08544 GHMP kinases C terminal AYM31_RS03215 PF07293 Protein of unknown function (DUF1450) AYM31_RS03220 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYM31_RS03220 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS03315 PF00248 Aldo/keto reductase family AYM31_RS03320 PF03358 NADPH-dependent FMN reductase AYM31_RS03330 PF01966 HD domain AYM31_RS03335 PF08741 YwhD family AYM31_RS03340 PF08240 Alcohol dehydrogenase GroES-like domain AYM31_RS03340 PF00107 Zinc-binding dehydrogenase AYM31_RS03355 PF00750 tRNA synthetases class I (R) AYM31_RS03355 PF05746 DALR anticodon binding domain AYM31_RS03355 PF03485 Arginyl tRNA synthetase N terminal domain AYM31_RS03375 PF01497 Periplasmic binding protein AYM31_RS03380 PF01032 FecCD transport family AYM31_RS03385 PF13419 Haloacid dehalogenase-like hydrolase AYM31_RS03390 PF00561 alpha/beta hydrolase fold AYM31_RS03405 PF12697 Alpha/beta hydrolase family AYM31_RS03420 PF00665 Integrase core domain AYM31_RS03420 PF13936 Helix-turn-helix domain AYM31_RS03470 PF12642 Conjugative transposon protein TcpC AYM31_RS03475 PF02486 Replication initiation factor AYM31_RS03475 PF18106 Rolling Circle replication initiation protein N-terminal domain AYM31_RS03510 PF00589 Phage integrase family AYM31_RS03515 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AYM31_RS03515 PF00361 Proton-conducting membrane transporter AYM31_RS03515 PF13244 Domain of unknown function (DUF4040) AYM31_RS03520 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AYM31_RS03525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AYM31_RS03530 PF00361 Proton-conducting membrane transporter AYM31_RS03535 PF01899 Na+/H+ ion antiporter subunit AYM31_RS03540 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AYM31_RS03545 PF03334 Na+/H+ antiporter subunit AYM31_RS03550 PF00999 Sodium/hydrogen exchanger family AYM31_RS03555 PF01297 Zinc-uptake complex component A periplasmic AYM31_RS03560 PF00950 ABC 3 transport family AYM31_RS03565 PF00005 ABC transporter AYM31_RS03570 PF02742 Iron dependent repressor, metal binding and dimerisation domain AYM31_RS03570 PF18357 Diphteria toxin repressor SH3 domain AYM31_RS03570 PF01325 Iron dependent repressor, N-terminal DNA binding domain AYM31_RS03580 PF03808 Glycosyl transferase WecB/TagA/CpsF family AYM31_RS03585 PF00005 ABC transporter AYM31_RS03590 PF01061 ABC-2 type transporter AYM31_RS03595 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AYM31_RS03600 PF00535 Glycosyl transferase family 2 AYM31_RS03605 PF01467 Cytidylyltransferase-like AYM31_RS03610 PF07943 Penicillin-binding protein 5, C-terminal domain AYM31_RS03610 PF00768 D-alanyl-D-alanine carboxypeptidase AYM31_RS03615 PF00664 ABC transporter transmembrane region AYM31_RS03615 PF00005 ABC transporter AYM31_RS03620 PF07662 Na+ dependent nucleoside transporter C-terminus AYM31_RS03620 PF01773 Na+ dependent nucleoside transporter N-terminus AYM31_RS03630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 AYM31_RS03630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AYM31_RS03635 PF00005 ABC transporter AYM31_RS03640 PF01032 FecCD transport family AYM31_RS03645 PF01032 FecCD transport family AYM31_RS03650 PF02733 Dak1 domain AYM31_RS03655 PF02734 DAK2 domain AYM31_RS03660 PF03610 PTS system fructose IIA component AYM31_RS03695 PF01370 NAD dependent epimerase/dehydratase family AYM31_RS03700 PF00072 Response regulator receiver domain AYM31_RS03700 PF00486 Transcriptional regulatory protein, C terminal AYM31_RS03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS03710 PF00005 ABC transporter AYM31_RS03715 PF02687 FtsX-like permease family AYM31_RS03720 PF01865 Protein of unknown function DUF47 AYM31_RS03725 PF01384 Phosphate transporter family AYM31_RS03730 PF01476 LysM domain AYM31_RS03730 PF05257 CHAP domain AYM31_RS03750 PF01709 Transcriptional regulator AYM31_RS03770 PF03466 LysR substrate binding domain AYM31_RS03770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYM31_RS03780 PF07690 Major Facilitator Superfamily AYM31_RS03785 PF04306 Protein of unknown function (DUF456) AYM31_RS03810 PF13302 Acetyltransferase (GNAT) domain AYM31_RS03815 PF03641 Possible lysine decarboxylase AYM31_RS03820 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AYM31_RS03830 PF02673 Bacitracin resistance protein BacA AYM31_RS03835 PF00664 ABC transporter transmembrane region AYM31_RS03835 PF00005 ABC transporter AYM31_RS03840 PF00664 ABC transporter transmembrane region AYM31_RS03840 PF00005 ABC transporter AYM31_RS03845 PF01047 MarR family AYM31_RS03850 PF07683 Cobalamin synthesis protein cobW C-terminal domain AYM31_RS03850 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYM31_RS03855 PF00248 Aldo/keto reductase family AYM31_RS03865 PF00939 Sodium:sulfate symporter transmembrane region AYM31_RS03870 PF00875 DNA photolyase AYM31_RS03870 PF03441 FAD binding domain of DNA photolyase AYM31_RS03890 PF07690 Major Facilitator Superfamily AYM31_RS03900 PF04073 Aminoacyl-tRNA editing domain AYM31_RS03905 PF00455 DeoR C terminal sensor domain AYM31_RS03905 PF08220 DeoR-like helix-turn-helix domain AYM31_RS03910 PF00294 pfkB family carbohydrate kinase AYM31_RS03915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYM31_RS03915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYM31_RS03920 PF01979 Amidohydrolase family AYM31_RS03925 PF01595 Cyclin M transmembrane N-terminal domain AYM31_RS03925 PF00571 CBS domain AYM31_RS03925 PF03471 Transporter associated domain AYM31_RS03930 PF00248 Aldo/keto reductase family AYM31_RS03935 PF00535 Glycosyl transferase family 2 AYM31_RS03940 PF00512 His Kinase A (phospho-acceptor) domain AYM31_RS03940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS03945 PF00486 Transcriptional regulatory protein, C terminal AYM31_RS03945 PF00072 Response regulator receiver domain AYM31_RS03965 PF04055 Radical SAM superfamily AYM31_RS03970 PF01242 6-pyruvoyl tetrahydropterin synthase AYM31_RS03975 PF06508 Queuosine biosynthesis protein QueC AYM31_RS03980 PF00591 Glycosyl transferase family, a/b domain AYM31_RS03980 PF02885 Glycosyl transferase family, helical bundle domain AYM31_RS03980 PF00117 Glutamine amidotransferase class-I AYM31_RS03985 PF00425 chorismate binding enzyme AYM31_RS03985 PF04715 Anthranilate synthase component I, N terminal region AYM31_RS04010 PF00884 Sulfatase AYM31_RS04015 PF16326 ABC transporter C-terminal domain AYM31_RS04015 PF00005 ABC transporter AYM31_RS04015 PF12848 ABC transporter AYM31_RS04020 PF09382 RQC domain AYM31_RS04020 PF00271 Helicase conserved C-terminal domain AYM31_RS04020 PF00270 DEAD/DEAH box helicase AYM31_RS04020 PF16124 RecQ zinc-binding AYM31_RS04020 PF00570 HRDC domain AYM31_RS04025 PF00005 ABC transporter AYM31_RS04025 PF00571 CBS domain AYM31_RS04030 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS04035 PF00155 Aminotransferase class I and II AYM31_RS04045 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) AYM31_RS04055 PF00781 Diacylglycerol kinase catalytic domain AYM31_RS04065 PF00854 POT family AYM31_RS04075 PF14489 QueF-like protein AYM31_RS04090 PF07972 NrdI Flavodoxin like AYM31_RS04095 PF00317 Ribonucleotide reductase, all-alpha domain AYM31_RS04095 PF08343 Ribonucleotide reductase N-terminal AYM31_RS04095 PF02867 Ribonucleotide reductase, barrel domain AYM31_RS04100 PF00268 Ribonucleotide reductase, small chain AYM31_RS04120 PF01032 FecCD transport family AYM31_RS04125 PF01032 FecCD transport family AYM31_RS04130 PF00005 ABC transporter AYM31_RS04135 PF01497 Periplasmic binding protein AYM31_RS04150 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AYM31_RS04150 PF01565 FAD binding domain AYM31_RS04170 PF02595 Glycerate kinase family AYM31_RS04175 PF07687 Peptidase dimerisation domain AYM31_RS04175 PF01546 Peptidase family M20/M25/M40 AYM31_RS04190 PF00990 Diguanylate cyclase, GGDEF domain AYM31_RS04190 PF07694 5TMR of 5TMR-LYT AYM31_RS04195 PF00953 Glycosyl transferase family 4 AYM31_RS04200 PF01205 Uncharacterized protein family UPF0029 AYM31_RS04200 PF09186 Domain of unknown function (DUF1949) AYM31_RS04205 PF02645 Uncharacterised protein, DegV family COG1307 AYM31_RS04210 PF00271 Helicase conserved C-terminal domain AYM31_RS04210 PF04851 Type III restriction enzyme, res subunit AYM31_RS04220 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus AYM31_RS04220 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AYM31_RS04225 PF07517 SecA DEAD-like domain AYM31_RS04225 PF07516 SecA Wing and Scaffold domain AYM31_RS04225 PF02810 SEC-C motif AYM31_RS04225 PF01043 SecA preprotein cross-linking domain AYM31_RS04235 PF03462 PCRF domain AYM31_RS04235 PF00472 RF-1 domain AYM31_RS04245 PF01476 LysM domain AYM31_RS04245 PF05257 CHAP domain AYM31_RS04260 PF17757 UvrB interaction domain AYM31_RS04260 PF00271 Helicase conserved C-terminal domain AYM31_RS04260 PF04851 Type III restriction enzyme, res subunit AYM31_RS04260 PF12344 Ultra-violet resistance protein B AYM31_RS04260 PF02151 UvrB/uvrC motif AYM31_RS04265 PF00005 ABC transporter AYM31_RS04265 PF17760 UvrA interaction domain AYM31_RS04265 PF17755 UvrA DNA-binding domain AYM31_RS04275 PF02603 HPr Serine kinase N terminus AYM31_RS04275 PF07475 HPr Serine kinase C-terminal domain AYM31_RS04280 PF01790 Prolipoprotein diacylglyceryl transferase AYM31_RS04285 PF14602 Hexapeptide repeat of succinyl-transferase AYM31_RS04295 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS04310 PF03668 P-loop ATPase protein family AYM31_RS04315 PF01933 Uncharacterised protein family UPF0052 AYM31_RS04320 PF02650 WhiA C-terminal HTH domain AYM31_RS04320 PF14527 WhiA LAGLIDADG-like domain AYM31_RS04320 PF10298 WhiA N-terminal LAGLIDADG-like domain AYM31_RS04330 PF00574 Clp protease AYM31_RS04335 PF08338 Domain of unknown function (DUF1731) AYM31_RS04335 PF01370 NAD dependent epimerase/dehydratase family AYM31_RS04355 PF04198 Putative sugar-binding domain AYM31_RS04360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYM31_RS04360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYM31_RS04365 PF00162 Phosphoglycerate kinase AYM31_RS04370 PF00121 Triosephosphate isomerase AYM31_RS04375 PF01676 Metalloenzyme superfamily AYM31_RS04375 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AYM31_RS04380 PF00113 Enolase, C-terminal TIM barrel domain AYM31_RS04380 PF03952 Enolase, N-terminal domain AYM31_RS04390 PF03840 Preprotein translocase SecG subunit AYM31_RS04395 PF12146 Serine aminopeptidase, S33 AYM31_RS04400 PF00773 RNB domain AYM31_RS04400 PF08206 Ribonuclease B OB domain AYM31_RS04400 PF17876 Cold shock domain AYM31_RS04400 PF00575 S1 RNA binding domain AYM31_RS04405 PF01668 SmpB protein AYM31_RS04450 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AYM31_RS04450 PF17961 Bacterial Ig domain AYM31_RS04450 PF00746 LPXTG cell wall anchor motif AYM31_RS04450 PF04650 YSIRK type signal peptide AYM31_RS04470 PF00565 Staphylococcal nuclease homologue AYM31_RS04475 PF00313 'Cold-shock' DNA-binding domain AYM31_RS04515 PF00300 Histidine phosphatase superfamily (branch 1) AYM31_RS04520 PF01810 LysE type translocator AYM31_RS04530 PF02566 OsmC-like protein AYM31_RS04535 PF01487 Type I 3-dehydroquinase AYM31_RS04545 PF00085 Thioredoxin AYM31_RS04550 PF03960 ArsC family AYM31_RS04555 PF01597 Glycine cleavage H-protein AYM31_RS04565 PF09234 Domain of unknown function (DUF1963) AYM31_RS04575 PF01751 Toprim domain AYM31_RS04585 PF00005 ABC transporter AYM31_RS04585 PF09383 NIL domain AYM31_RS04590 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS04595 PF03180 NLPA lipoprotein AYM31_RS04600 PF14659 Phage integrase, N-terminal SAM-like domain AYM31_RS04600 PF00589 Phage integrase family AYM31_RS04605 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS04610 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS04705 PF05532 CsbD-like AYM31_RS04715 PF00005 ABC transporter AYM31_RS04720 PF01458 Uncharacterized protein family (UPF0051) AYM31_RS04725 PF00266 Aminotransferase class-V AYM31_RS04730 PF01592 NifU-like N terminal domain AYM31_RS04735 PF01458 Uncharacterized protein family (UPF0051) AYM31_RS04820 PF00436 Single-strand binding protein family AYM31_RS04840 PF01695 IstB-like ATP binding protein AYM31_RS04935 PF17288 Terminase RNAseH like domain AYM31_RS04935 PF04466 Phage terminase large subunit AYM31_RS05045 PF13457 GW (Gly-Tryp) dipeptide domain AYM31_RS05045 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AYM31_RS05065 PF05257 CHAP domain AYM31_RS05065 PF01510 N-acetylmuramoyl-L-alanine amidase AYM31_RS05065 PF08460 Bacterial SH3 domain AYM31_RS05090 PF03471 Transporter associated domain AYM31_RS05090 PF01595 Cyclin M transmembrane N-terminal domain AYM31_RS05090 PF00571 CBS domain AYM31_RS05095 PF03060 Nitronate monooxygenase AYM31_RS05105 PF01904 Protein of unknown function DUF72 AYM31_RS05110 PF01925 Sulfite exporter TauE/SafE AYM31_RS05120 PF04055 Radical SAM superfamily AYM31_RS05120 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AYM31_RS05125 PF06265 Protein of unknown function (DUF1027) AYM31_RS05135 PF01934 Protein of unknown function DUF86 AYM31_RS05140 PF13344 Haloacid dehalogenase-like hydrolase AYM31_RS05145 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYM31_RS05145 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYM31_RS05160 PF13193 AMP-binding enzyme C-terminal domain AYM31_RS05160 PF00501 AMP-binding enzyme AYM31_RS05165 PF03062 MBOAT, membrane-bound O-acyltransferase family AYM31_RS05170 PF00550 Phosphopantetheine attachment site AYM31_RS05175 PF04914 DltD protein AYM31_RS05180 PF01106 NifU-like domain AYM31_RS05185 PF07315 Protein of unknown function (DUF1462) AYM31_RS05190 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS05195 PF07293 Protein of unknown function (DUF1450) AYM31_RS05200 PF01521 Iron-sulphur cluster biosynthesis AYM31_RS05205 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS05210 PF00883 Cytosol aminopeptidase family, catalytic domain AYM31_RS05210 PF02789 Cytosol aminopeptidase family, N-terminal domain AYM31_RS05215 PF13726 Na+-H+ antiporter family AYM31_RS05215 PF03553 Na+/H+ antiporter family AYM31_RS05220 PF03061 Thioesterase superfamily AYM31_RS05230 PF03334 Na+/H+ antiporter subunit AYM31_RS05235 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) AYM31_RS05240 PF01899 Na+/H+ ion antiporter subunit AYM31_RS05245 PF00361 Proton-conducting membrane transporter AYM31_RS05250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AYM31_RS05255 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter AYM31_RS05260 PF13244 Domain of unknown function (DUF4040) AYM31_RS05260 PF00361 Proton-conducting membrane transporter AYM31_RS05260 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AYM31_RS05270 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AYM31_RS05275 PF00575 S1 RNA binding domain AYM31_RS05280 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AYM31_RS05285 PF00202 Aminotransferase class-III AYM31_RS05290 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AYM31_RS05290 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYM31_RS05305 PF03009 Glycerophosphoryl diester phosphodiesterase family AYM31_RS05310 PF14698 Argininosuccinate lyase C-terminal AYM31_RS05310 PF00206 Lyase AYM31_RS05315 PF00764 Arginosuccinate synthase AYM31_RS05320 PF00342 Phosphoglucose isomerase AYM31_RS05325 PF09335 SNARE associated Golgi protein AYM31_RS05330 PF10502 Signal peptidase, peptidase S26 AYM31_RS05335 PF10502 Signal peptidase, peptidase S26 AYM31_RS05340 PF12705 PD-(D/E)XK nuclease superfamily AYM31_RS05340 PF13361 UvrD-like helicase C-terminal domain AYM31_RS05345 PF12705 PD-(D/E)XK nuclease superfamily AYM31_RS05345 PF13361 UvrD-like helicase C-terminal domain AYM31_RS05345 PF00580 UvrD/REP helicase N-terminal domain AYM31_RS05350 PF01557 Fumarylacetoacetate (FAA) hydrolase family AYM31_RS05355 PF07457 Protein of unknown function (DUF1516) AYM31_RS05360 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS05360 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYM31_RS05370 PF01883 Iron-sulfur cluster assembly protein AYM31_RS05375 PF01757 Acyltransferase family AYM31_RS05380 PF10431 C-terminal, D2-small domain, of ClpB protein AYM31_RS05380 PF00004 ATPase family associated with various cellular activities (AAA) AYM31_RS05380 PF07724 AAA domain (Cdc48 subfamily) AYM31_RS05380 PF17871 AAA lid domain AYM31_RS05380 PF02861 Clp amino terminal domain, pathogenicity island component AYM31_RS05390 PF08502 LeuA allosteric (dimerisation) domain AYM31_RS05390 PF00682 HMGL-like AYM31_RS05405 PF01161 Phosphatidylethanolamine-binding protein AYM31_RS05410 PF03642 MAP domain AYM31_RS05420 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AYM31_RS05420 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AYM31_RS05425 PF02801 Beta-ketoacyl synthase, C-terminal domain AYM31_RS05425 PF00109 Beta-ketoacyl synthase, N-terminal domain AYM31_RS05435 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS05440 PF12911 N-terminal TM domain of oligopeptide transport permease C AYM31_RS05440 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS05445 PF00005 ABC transporter AYM31_RS05445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYM31_RS05450 PF00005 ABC transporter AYM31_RS05450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYM31_RS05455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYM31_RS05460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYM31_RS05465 PF00005 ABC transporter AYM31_RS05465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYM31_RS05470 PF00005 ABC transporter AYM31_RS05470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AYM31_RS05475 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS05480 PF12911 N-terminal TM domain of oligopeptide transport permease C AYM31_RS05480 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS05485 PF00579 tRNA synthetases class I (W and Y) AYM31_RS05490 PF03960 ArsC family AYM31_RS05495 PF05389 Negative regulator of genetic competence (MecA) AYM31_RS05510 PF01432 Peptidase family M3 AYM31_RS05510 PF08439 Oligopeptidase F AYM31_RS05520 PF01152 Bacterial-like globin AYM31_RS05535 PF04607 Region found in RelA / SpoT proteins AYM31_RS05540 PF01513 ATP-NAD kinase AYM31_RS05545 PF00849 RNA pseudouridylate synthase AYM31_RS05550 PF03448 MgtE intracellular N domain AYM31_RS05550 PF01769 Divalent cation transporter AYM31_RS05550 PF00571 CBS domain AYM31_RS05555 PF02254 TrkA-N domain AYM31_RS05555 PF02080 TrkA-C domain AYM31_RS05555 PF00999 Sodium/hydrogen exchanger family AYM31_RS05565 PF01594 AI-2E family transporter AYM31_RS05570 PF01235 Sodium:alanine symporter family AYM31_RS05585 PF07690 Major Facilitator Superfamily AYM31_RS05590 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase AYM31_RS05590 PF04101 Glycosyltransferase family 28 C-terminal domain AYM31_RS05595 PF01225 Mur ligase family, catalytic domain AYM31_RS05595 PF02875 Mur ligase family, glutamate ligase domain AYM31_RS05595 PF08245 Mur ligase middle domain AYM31_RS05605 PF00009 Elongation factor Tu GTP binding domain AYM31_RS05605 PF16658 Class II release factor RF3, C-terminal domain AYM31_RS05605 PF03144 Elongation factor Tu domain 2 AYM31_RS05610 PF03741 Integral membrane protein TerC family AYM31_RS05615 PF13180 PDZ domain AYM31_RS05620 PF02386 Cation transport protein AYM31_RS05625 PF02872 5'-nucleotidase, C-terminal domain AYM31_RS05625 PF00149 Calcineurin-like phosphoesterase AYM31_RS05640 PF06338 ComK protein AYM31_RS05650 PF10437 Bacterial lipoate protein ligase C-terminus AYM31_RS05650 PF03099 Biotin/lipoate A/B protein ligase family AYM31_RS05655 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) AYM31_RS05690 PF00005 ABC transporter AYM31_RS05690 PF12704 MacB-like periplasmic core domain AYM31_RS05690 PF02687 FtsX-like permease family AYM31_RS05705 PF00534 Glycosyl transferases group 1 AYM31_RS05715 PF01497 Periplasmic binding protein AYM31_RS05725 PF05154 TM2 domain AYM31_RS05730 PF00583 Acetyltransferase (GNAT) family AYM31_RS05735 PF01040 UbiA prenyltransferase family AYM31_RS05745 PF00425 chorismate binding enzyme AYM31_RS05750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYM31_RS05750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYM31_RS05750 PF16582 Middle domain of thiamine pyrophosphate AYM31_RS05755 PF00561 alpha/beta hydrolase fold AYM31_RS05760 PF00378 Enoyl-CoA hydratase/isomerase AYM31_RS05765 PF09023 Staphostatin B AYM31_RS05770 PF05543 Staphopain peptidase C47 AYM31_RS05770 PF14731 Staphopain proregion AYM31_RS05780 PF00155 Aminotransferase class I and II AYM31_RS05785 PF01757 Acyltransferase family AYM31_RS05800 PF13457 GW (Gly-Tryp) dipeptide domain AYM31_RS05800 PF01510 N-acetylmuramoyl-L-alanine amidase AYM31_RS05800 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AYM31_RS05805 PF13673 Acetyltransferase (GNAT) domain AYM31_RS05810 PF10804 Protein of unknown function (DUF2538) AYM31_RS05815 PF03816 Cell envelope-related transcriptional attenuator domain AYM31_RS05820 PF00144 Beta-lactamase AYM31_RS05825 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AYM31_RS05830 PF00510 Cytochrome c oxidase subunit III AYM31_RS05835 PF00115 Cytochrome C and Quinol oxidase polypeptide I AYM31_RS05840 PF02790 Cytochrome C oxidase subunit II, transmembrane domain AYM31_RS05840 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AYM31_RS05860 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AYM31_RS05860 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AYM31_RS05865 PF00731 AIR carboxylase AYM31_RS05870 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AYM31_RS05870 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYM31_RS05870 PF02222 ATP-grasp domain AYM31_RS05875 PF01259 SAICAR synthetase AYM31_RS05880 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase AYM31_RS05890 PF00586 AIR synthase related protein, N-terminal domain AYM31_RS05890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AYM31_RS05890 PF02769 AIR synthase related protein, C-terminal domain AYM31_RS05895 PF00156 Phosphoribosyl transferase domain AYM31_RS05895 PF13537 Glutamine amidotransferase domain AYM31_RS05900 PF00586 AIR synthase related protein, N-terminal domain AYM31_RS05900 PF02769 AIR synthase related protein, C-terminal domain AYM31_RS05905 PF00551 Formyl transferase AYM31_RS05910 PF02142 MGS-like domain AYM31_RS05910 PF01808 AICARFT/IMPCHase bienzyme AYM31_RS05915 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AYM31_RS05915 PF02843 Phosphoribosylglycinamide synthetase, C domain AYM31_RS05915 PF02844 Phosphoribosylglycinamide synthetase, N domain AYM31_RS05920 PF02361 Cobalt transport protein AYM31_RS05925 PF00005 ABC transporter AYM31_RS05930 PF09819 ABC-type cobalt transport system, permease component AYM31_RS05955 PF17785 PUA-like domain AYM31_RS05955 PF10672 S-adenosylmethionine-dependent methyltransferase AYM31_RS05965 PF00381 PTS HPr component phosphorylation site AYM31_RS05970 PF05524 PEP-utilising enzyme, N-terminal AYM31_RS05970 PF00391 PEP-utilising enzyme, mobile domain AYM31_RS05970 PF02896 PEP-utilising enzyme, TIM barrel domain AYM31_RS05980 PF01654 Cytochrome bd terminal oxidase subunit I AYM31_RS05985 PF02322 Cytochrome bd terminal oxidase subunit II AYM31_RS05990 PF02254 TrkA-N domain AYM31_RS05990 PF02080 TrkA-C domain AYM31_RS06000 PF17770 Ribonuclease J C-terminal domain AYM31_RS06000 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AYM31_RS06000 PF00753 Metallo-beta-lactamase superfamily AYM31_RS06005 PF07288 Protein of unknown function (DUF1447) AYM31_RS06015 PF01327 Polypeptide deformylase AYM31_RS06025 PF00676 Dehydrogenase E1 component AYM31_RS06030 PF02779 Transketolase, pyrimidine binding domain AYM31_RS06030 PF02780 Transketolase, C-terminal domain AYM31_RS06035 PF02817 e3 binding domain AYM31_RS06035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYM31_RS06035 PF00364 Biotin-requiring enzyme AYM31_RS06040 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS06040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYM31_RS06045 PF05256 Uncharacterised protein family (UPF0223) AYM31_RS06055 PF08402 TOBE domain AYM31_RS06055 PF00005 ABC transporter AYM31_RS06060 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS06065 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS06070 PF13416 Bacterial extracellular solute-binding protein AYM31_RS06085 PF01566 Natural resistance-associated macrophage protein AYM31_RS06090 PF06335 Protein of unknown function (DUF1054) AYM31_RS06095 PF00459 Inositol monophosphatase family AYM31_RS06105 PF00009 Elongation factor Tu GTP binding domain AYM31_RS06105 PF03144 Elongation factor Tu domain 2 AYM31_RS06105 PF14492 Elongation Factor G, domain II AYM31_RS06105 PF00679 Elongation factor G C-terminus AYM31_RS06120 PF07408 Protein of unknown function (DUF1507) AYM31_RS06125 PF01098 Cell cycle protein AYM31_RS06130 PF02436 Conserved carboxylase domain AYM31_RS06130 PF00682 HMGL-like AYM31_RS06130 PF00364 Biotin-requiring enzyme AYM31_RS06130 PF00289 Biotin carboxylase, N-terminal domain AYM31_RS06130 PF02785 Biotin carboxylase C-terminal domain AYM31_RS06130 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYM31_RS06135 PF02628 Cytochrome oxidase assembly protein AYM31_RS06140 PF01040 UbiA prenyltransferase family AYM31_RS06160 PF06133 Control of competence regulator ComK, YlbF/YmcA AYM31_RS06165 PF03009 Glycerophosphoryl diester phosphodiesterase family AYM31_RS06170 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) AYM31_RS06185 PF01467 Cytidylyltransferase-like AYM31_RS06190 PF05636 HIGH Nucleotidyl Transferase AYM31_RS06205 PF01783 Ribosomal L32p protein family AYM31_RS06210 PF00746 LPXTG cell wall anchor motif AYM31_RS06210 PF05031 Iron Transport-associated domain AYM31_RS06210 PF04650 YSIRK type signal peptide AYM31_RS06215 PF00746 LPXTG cell wall anchor motif AYM31_RS06215 PF05031 Iron Transport-associated domain AYM31_RS06220 PF05031 Iron Transport-associated domain AYM31_RS06230 PF01497 Periplasmic binding protein AYM31_RS06235 PF01032 FecCD transport family AYM31_RS06240 PF04203 Sortase domain AYM31_RS06245 PF03992 Antibiotic biosynthesis monooxygenase AYM31_RS06255 PF08032 RNA 2'-O ribose methyltransferase substrate binding AYM31_RS06255 PF00588 SpoU rRNA Methylase family AYM31_RS06260 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AYM31_RS06260 PF01409 tRNA synthetases class II core domain (F) AYM31_RS06265 PF03147 Ferredoxin-fold anticodon binding domain AYM31_RS06265 PF01588 Putative tRNA binding domain AYM31_RS06265 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AYM31_RS06265 PF03484 tRNA synthetase B5 domain AYM31_RS06265 PF03483 B3/4 domain AYM31_RS06275 PF01351 Ribonuclease HII AYM31_RS06275 PF11858 Domain of unknown function (DUF3378) AYM31_RS06280 PF05164 Cell division protein ZapA AYM31_RS06290 PF14791 DNA polymerase beta thumb AYM31_RS06290 PF02811 PHP domain AYM31_RS06290 PF14716 Helix-hairpin-helix domain AYM31_RS06295 PF00488 MutS domain V AYM31_RS06295 PF01713 Smr domain AYM31_RS06300 PF00085 Thioredoxin AYM31_RS06310 PF02151 UvrB/uvrC motif AYM31_RS06310 PF08459 UvrC Helix-hairpin-helix N-terminal AYM31_RS06310 PF01541 GIY-YIG catalytic domain AYM31_RS06315 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AYM31_RS06320 PF00890 FAD binding domain AYM31_RS06320 PF02910 Fumarate reductase flavoprotein C-term AYM31_RS06325 PF13085 2Fe-2S iron-sulfur cluster binding domain AYM31_RS06325 PF13183 4Fe-4S dicluster domain AYM31_RS06330 PF01177 Asp/Glu/Hydantoin racemase AYM31_RS06335 PF01725 Ham1 family AYM31_RS06340 PF12850 Calcineurin-like phosphoesterase superfamily domain AYM31_RS06360 PF16104 Formyl peptide receptor-like 1 inhibitory protein AYM31_RS06370 PF12199 Extracellular fibrinogen binding protein C terminal AYM31_RS06400 PF07968 Leukocidin/Hemolysin toxin family AYM31_RS06420 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS06425 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS06430 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS06435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYM31_RS06435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYM31_RS06440 PF00696 Amino acid kinase family AYM31_RS06445 PF03606 C4-dicarboxylate anaerobic carrier AYM31_RS06470 PF05480 Staphylococcus haemolytic protein AYM31_RS06475 PF05480 Staphylococcus haemolytic protein AYM31_RS06480 PF13419 Haloacid dehalogenase-like hydrolase AYM31_RS06490 PF10079 Bacillithiol biosynthesis BshC AYM31_RS06495 PF02381 MraZ protein, putative antitoxin-like AYM31_RS06500 PF01795 MraW methylase family AYM31_RS06505 PF04977 Septum formation initiator AYM31_RS06510 PF03717 Penicillin-binding Protein dimerisation domain AYM31_RS06510 PF00905 Penicillin binding protein transpeptidase domain AYM31_RS06510 PF03793 PASTA domain AYM31_RS06515 PF00953 Glycosyl transferase family 4 AYM31_RS06520 PF02875 Mur ligase family, glutamate ligase domain AYM31_RS06520 PF08245 Mur ligase middle domain AYM31_RS06525 PF08478 POTRA domain, FtsQ-type AYM31_RS06525 PF03799 Cell division protein FtsQ AYM31_RS06530 PF02491 SHS2 domain inserted in FTSA AYM31_RS06535 PF00091 Tubulin/FtsZ family, GTPase domain AYM31_RS06535 PF12327 FtsZ family, C-terminal domain AYM31_RS06540 PF02578 Multi-copper polyphenol oxidoreductase laccase AYM31_RS06545 PF01168 Alanine racemase, N-terminal domain AYM31_RS06550 PF04472 Cell division protein SepF AYM31_RS06555 PF02325 YGGT family AYM31_RS06560 PF17774 Putative RNA-binding domain in YlmH AYM31_RS06560 PF01479 S4 domain AYM31_RS06565 PF05103 DivIVA protein AYM31_RS06570 PF08264 Anticodon-binding domain of tRNA AYM31_RS06570 PF00133 tRNA synthetases class I (I, L, M and V) AYM31_RS06570 PF06827 Zinc finger found in FPG and IleRS AYM31_RS06575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYM31_RS06585 PF01252 Signal peptidase (SPase) II AYM31_RS06590 PF01479 S4 domain AYM31_RS06590 PF00849 RNA pseudouridylate synthase AYM31_RS06595 PF00156 Phosphoribosyl transferase domain AYM31_RS06600 PF00860 Permease family AYM31_RS06605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYM31_RS06605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYM31_RS06610 PF01979 Amidohydrolase family AYM31_RS06615 PF00117 Glutamine amidotransferase class-I AYM31_RS06615 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AYM31_RS06620 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYM31_RS06620 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYM31_RS06620 PF02142 MGS-like domain AYM31_RS06625 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AYM31_RS06630 PF00156 Phosphoribosyl transferase domain AYM31_RS06645 PF05670 NFACT protein RNA binding domain AYM31_RS06650 PF00625 Guanylate kinase AYM31_RS06655 PF01192 RNA polymerase Rpb6 AYM31_RS06660 PF02441 Flavoprotein AYM31_RS06660 PF04127 DNA / pantothenate metabolism flavoprotein AYM31_RS06665 PF00271 Helicase conserved C-terminal domain AYM31_RS06665 PF17764 3′ DNA-binding domain (3′BD) AYM31_RS06665 PF18074 Primosomal protein N C-terminal domain AYM31_RS06665 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AYM31_RS06665 PF04851 Type III restriction enzyme, res subunit AYM31_RS06675 PF05154 TM2 domain AYM31_RS06680 PF01327 Polypeptide deformylase AYM31_RS06685 PF00551 Formyl transferase AYM31_RS06685 PF02911 Formyl transferase, C-terminal domain AYM31_RS06690 PF01029 NusB family AYM31_RS06690 PF01189 16S rRNA methyltransferase RsmB/F AYM31_RS06695 PF04055 Radical SAM superfamily AYM31_RS06705 PF03793 PASTA domain AYM31_RS06705 PF00069 Protein kinase domain AYM31_RS06710 PF03193 RsgA GTPase AYM31_RS06710 PF16745 RsgA N-terminal domain AYM31_RS06715 PF00834 Ribulose-phosphate 3 epimerase family AYM31_RS06725 PF00830 Ribosomal L28 family AYM31_RS06730 PF03780 Asp23 family, cell envelope-related function AYM31_RS06735 PF13684 Dihydroxyacetone kinase family AYM31_RS06735 PF02734 DAK2 domain AYM31_RS06740 PF00270 DEAD/DEAH box helicase AYM31_RS06740 PF17191 RecG wedge domain AYM31_RS06740 PF00271 Helicase conserved C-terminal domain AYM31_RS06745 PF03061 Thioesterase superfamily AYM31_RS06750 PF02504 Fatty acid synthesis protein AYM31_RS06755 PF00698 Acyl transferase domain AYM31_RS06770 PF00550 Phosphopantetheine attachment site AYM31_RS06775 PF00035 Double-stranded RNA binding motif AYM31_RS06775 PF14622 Ribonuclease-III-like AYM31_RS06780 PF02463 RecF/RecN/SMC N terminal domain AYM31_RS06780 PF06470 SMC proteins Flexible Hinge Domain AYM31_RS06785 PF02881 SRP54-type protein, helical bundle domain AYM31_RS06785 PF00448 SRP54-type protein, GTPase domain AYM31_RS06790 PF04297 Putative helix-turn-helix protein, YlxM / p13 like AYM31_RS06795 PF02881 SRP54-type protein, helical bundle domain AYM31_RS06795 PF02978 Signal peptide binding domain AYM31_RS06795 PF00448 SRP54-type protein, GTPase domain AYM31_RS06800 PF00886 Ribosomal protein S16 AYM31_RS06805 PF05239 PRC-barrel domain AYM31_RS06805 PF01782 RimM N-terminal domain AYM31_RS06810 PF01746 tRNA (Guanine-1)-methyltransferase AYM31_RS06815 PF01245 Ribosomal protein L19 AYM31_RS06825 PF01926 50S ribosome-binding GTPase AYM31_RS06830 PF01351 Ribonuclease HII AYM31_RS06835 PF00549 CoA-ligase AYM31_RS06835 PF08442 ATP-grasp domain AYM31_RS06840 PF02629 CoA binding domain AYM31_RS06840 PF00549 CoA-ligase AYM31_RS06845 PF05257 CHAP domain AYM31_RS06845 PF01476 LysM domain AYM31_RS06850 PF02388 FemAB family AYM31_RS06855 PF02481 DNA recombination-mediator protein A AYM31_RS06860 PF01751 Toprim domain AYM31_RS06860 PF01396 Topoisomerase DNA binding C4 zinc finger AYM31_RS06860 PF01131 DNA topoisomerase AYM31_RS06865 PF01134 Glucose inhibited division protein A AYM31_RS06870 PF02899 Phage integrase, N-terminal SAM-like domain AYM31_RS06870 PF00589 Phage integrase family AYM31_RS06875 PF00227 Proteasome subunit AYM31_RS06880 PF10431 C-terminal, D2-small domain, of ClpB protein AYM31_RS06880 PF07724 AAA domain (Cdc48 subfamily) AYM31_RS06880 PF00004 ATPase family associated with various cellular activities (AAA) AYM31_RS06885 PF06018 CodY GAF-like domain AYM31_RS06885 PF08222 CodY helix-turn-helix domain AYM31_RS06895 PF00318 Ribosomal protein S2 AYM31_RS06905 PF00889 Elongation factor TS AYM31_RS06910 PF00696 Amino acid kinase family AYM31_RS06915 PF01765 Ribosome recycling factor AYM31_RS06920 PF01255 Putative undecaprenyl diphosphate synthase AYM31_RS06930 PF02163 Peptidase family M50 AYM31_RS06930 PF13180 PDZ domain AYM31_RS06935 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYM31_RS06935 PF03129 Anticodon binding domain AYM31_RS06935 PF04073 Aminoacyl-tRNA editing domain AYM31_RS06940 PF00929 Exonuclease AYM31_RS06940 PF14480 DNA polymerase III polC-type N-terminus I AYM31_RS06940 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AYM31_RS06940 PF11490 DNA polymerase III polC-type N-terminus II AYM31_RS06940 PF02811 PHP domain AYM31_RS06940 PF14579 Helix-hairpin-helix motif AYM31_RS06940 PF07733 Bacterial DNA polymerase III alpha NTPase domain AYM31_RS06950 PF17384 RimP C-terminal SH3 domain AYM31_RS06950 PF02576 RimP N-terminal domain AYM31_RS06955 PF08529 NusA N-terminal domain AYM31_RS06955 PF13184 NusA-like KH domain AYM31_RS06955 PF00575 S1 RNA binding domain AYM31_RS06960 PF04296 Protein of unknown function (DUF448) AYM31_RS06965 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family AYM31_RS06970 PF04760 Translation initiation factor IF-2, N-terminal region AYM31_RS06970 PF11987 Translation-initiation factor 2 AYM31_RS06970 PF00009 Elongation factor Tu GTP binding domain AYM31_RS06975 PF02033 Ribosome-binding factor A AYM31_RS06980 PF01509 TruB family pseudouridylate synthase (N terminal domain) AYM31_RS06980 PF16198 tRNA pseudouridylate synthase B C-terminal domain AYM31_RS06985 PF06574 FAD synthetase AYM31_RS06985 PF01687 Riboflavin kinase AYM31_RS06990 PF00312 Ribosomal protein S15 AYM31_RS06995 PF00013 KH domain AYM31_RS06995 PF03725 3' exoribonuclease family, domain 2 AYM31_RS06995 PF00575 S1 RNA binding domain AYM31_RS06995 PF01138 3' exoribonuclease family, domain 1 AYM31_RS06995 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AYM31_RS07005 PF00753 Metallo-beta-lactamase superfamily AYM31_RS07005 PF17770 Ribonuclease J C-terminal domain AYM31_RS07005 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain AYM31_RS07010 PF17854 FtsK alpha domain AYM31_RS07010 PF09397 Ftsk gamma domain AYM31_RS07010 PF01580 FtsK/SpoIIIE family AYM31_RS07015 PF00392 Bacterial regulatory proteins, gntR family AYM31_RS07015 PF07702 UTRA domain AYM31_RS07020 PF05193 Peptidase M16 inactive domain AYM31_RS07025 PF05193 Peptidase M16 inactive domain AYM31_RS07025 PF00675 Insulinase (Peptidase family M16) AYM31_RS07035 PF11868 Protein of unknown function (DUF3388) AYM31_RS07045 PF01066 CDP-alcohol phosphatidyltransferase AYM31_RS07050 PF00994 Probable molybdopterin binding domain AYM31_RS07050 PF18146 Damage-inducible protein CinA KH domain AYM31_RS07050 PF02464 Competence-damaged protein AYM31_RS07055 PF00154 recA bacterial DNA recombination protein AYM31_RS07060 PF12072 Domain of unknown function (DUF3552) AYM31_RS07060 PF00013 KH domain AYM31_RS07060 PF01966 HD domain AYM31_RS07070 PF13277 YmdB-like protein AYM31_RS07075 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AYM31_RS07075 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AYM31_RS07075 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AYM31_RS07080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYM31_RS07085 PF01910 Thiamine-binding protein AYM31_RS07090 PF04055 Radical SAM superfamily AYM31_RS07090 PF00919 Uncharacterized protein family UPF0004 AYM31_RS07090 PF01938 TRAM domain AYM31_RS07105 PF01624 MutS domain I AYM31_RS07105 PF05188 MutS domain II AYM31_RS07105 PF05192 MutS domain III AYM31_RS07105 PF00488 MutS domain V AYM31_RS07105 PF05190 MutS family domain IV AYM31_RS07110 PF08676 MutL C terminal dimerisation domain AYM31_RS07110 PF01119 DNA mismatch repair protein, C-terminal domain AYM31_RS07115 PF04309 Glycerol-3-phosphate responsive antiterminator AYM31_RS07120 PF00230 Major intrinsic protein AYM31_RS07125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AYM31_RS07125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AYM31_RS07130 PF01266 FAD dependent oxidoreductase AYM31_RS07130 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AYM31_RS07145 PF17209 Hfq protein AYM31_RS07150 PF00255 Glutathione peroxidase AYM31_RS07155 PF13167 GTP-binding GTPase N-terminal AYM31_RS07155 PF01926 50S ribosome-binding GTPase AYM31_RS07155 PF16360 GTP-binding GTPase Middle Region AYM31_RS07160 PF06838 Methionine gamma-lyase AYM31_RS07165 PF13411 MerR HTH family regulatory protein AYM31_RS07170 PF03951 Glutamine synthetase, beta-Grasp domain AYM31_RS07170 PF00120 Glutamine synthetase, catalytic domain AYM31_RS07280 PF13396 Phospholipase_D-nuclease N-terminal AYM31_RS07280 PF13091 PLD-like domain AYM31_RS07285 PF00005 ABC transporter AYM31_RS07300 PF00196 Bacterial regulatory proteins, luxR family AYM31_RS07300 PF00072 Response regulator receiver domain AYM31_RS07310 PF00565 Staphylococcal nuclease homologue AYM31_RS07325 PF13840 ACT domain AYM31_RS07325 PF00696 Amino acid kinase family AYM31_RS07330 PF00742 Homoserine dehydrogenase AYM31_RS07330 PF01842 ACT domain AYM31_RS07330 PF03447 Homoserine dehydrogenase, NAD binding domain AYM31_RS07335 PF00291 Pyridoxal-phosphate dependent enzyme AYM31_RS07340 PF00288 GHMP kinases N terminal domain AYM31_RS07340 PF08544 GHMP kinases C terminal AYM31_RS07360 PF00324 Amino acid permease AYM31_RS07365 PF06628 Catalase-related immune-responsive AYM31_RS07365 PF00199 Catalase AYM31_RS07370 PF00471 Ribosomal protein L33 AYM31_RS07375 PF00253 Ribosomal protein S14p/S29e AYM31_RS07380 PF00478 IMP dehydrogenase / GMP reductase domain AYM31_RS07390 PF00188 Cysteine-rich secretory protein family AYM31_RS07395 PF01726 LexA DNA binding domain AYM31_RS07395 PF00717 Peptidase S24-like AYM31_RS07405 PF05979 Bacterial protein of unknown function (DUF896) AYM31_RS07410 PF02779 Transketolase, pyrimidine binding domain AYM31_RS07410 PF00456 Transketolase, thiamine diphosphate binding domain AYM31_RS07410 PF02780 Transketolase, C-terminal domain AYM31_RS07415 PF03672 Uncharacterised protein family (UPF0154) AYM31_RS07425 PF07301 Protein of unknown function (DUF1453) AYM31_RS07430 PF12320 Type 5 capsule protein repressor C-terminal domain AYM31_RS07430 PF00149 Calcineurin-like phosphoesterase AYM31_RS07435 PF13476 AAA domain AYM31_RS07440 PF01741 Large-conductance mechanosensitive channel, MscL AYM31_RS07445 PF02028 BCCT, betaine/carnitine/choline family transporter AYM31_RS07455 PF00694 Aconitase C-terminal domain AYM31_RS07455 PF00330 Aconitase family (aconitate hydratase) AYM31_RS07460 PF03061 Thioesterase superfamily AYM31_RS07480 PF02660 Glycerol-3-phosphate acyltransferase AYM31_RS07485 PF01751 Toprim domain AYM31_RS07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS07485 PF00204 DNA gyrase B AYM31_RS07485 PF00986 DNA gyrase B subunit, carboxyl terminus AYM31_RS07490 PF00521 DNA gyrase/topoisomerase IV, subunit A AYM31_RS07490 PF03989 DNA gyrase C-terminal domain, beta-propeller AYM31_RS07500 PF01235 Sodium:alanine symporter family AYM31_RS07505 PF00874 PRD domain AYM31_RS07505 PF03123 CAT RNA binding domain AYM31_RS07515 PF01594 AI-2E family transporter AYM31_RS07520 PF03706 Lysylphosphatidylglycerol synthase TM region AYM31_RS07520 PF09924 Uncharacterised conserved protein (DUF2156) AYM31_RS07525 PF01625 Peptide methionine sulfoxide reductase AYM31_RS07530 PF03816 Cell envelope-related transcriptional attenuator domain AYM31_RS07535 PF01361 Tautomerase enzyme AYM31_RS07540 PF00817 impB/mucB/samB family AYM31_RS07540 PF11798 IMS family HHH motif AYM31_RS07540 PF11799 impB/mucB/samB family C-terminal domain AYM31_RS07545 PF02153 Prephenate dehydrogenase AYM31_RS07550 PF05343 M42 glutamyl aminopeptidase AYM31_RS07555 PF04715 Anthranilate synthase component I, N terminal region AYM31_RS07555 PF00425 chorismate binding enzyme AYM31_RS07560 PF00117 Glutamine amidotransferase class-I AYM31_RS07565 PF00591 Glycosyl transferase family, a/b domain AYM31_RS07570 PF00218 Indole-3-glycerol phosphate synthase AYM31_RS07575 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AYM31_RS07580 PF00291 Pyridoxal-phosphate dependent enzyme AYM31_RS07585 PF00290 Tryptophan synthase alpha chain AYM31_RS07590 PF02388 FemAB family AYM31_RS07595 PF02388 FemAB family AYM31_RS07610 PF00005 ABC transporter AYM31_RS07615 PF00005 ABC transporter AYM31_RS07620 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS07640 PF01432 Peptidase family M3 AYM31_RS07640 PF08439 Oligopeptidase F AYM31_RS07645 PF01895 PhoU domain AYM31_RS07650 PF00005 ABC transporter AYM31_RS07655 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS07660 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS07665 PF12849 PBP superfamily domain AYM31_RS07675 PF17783 CvfB-like winged helix domain AYM31_RS07675 PF13509 S1 domain AYM31_RS07680 PF00005 ABC transporter AYM31_RS07680 PF12848 ABC transporter AYM31_RS07690 PF01842 ACT domain AYM31_RS07690 PF00696 Amino acid kinase family AYM31_RS07690 PF13840 ACT domain AYM31_RS07695 PF02774 Semialdehyde dehydrogenase, dimerisation domain AYM31_RS07695 PF01118 Semialdehyde dehydrogenase, NAD binding domain AYM31_RS07700 PF00701 Dihydrodipicolinate synthetase family AYM31_RS07705 PF05173 Dihydrodipicolinate reductase, C-terminus AYM31_RS07705 PF01113 Dihydrodipicolinate reductase, N-terminus AYM31_RS07710 PF00132 Bacterial transferase hexapeptide (six repeats) AYM31_RS07710 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal AYM31_RS07710 PF14602 Hexapeptide repeat of succinyl-transferase AYM31_RS07715 PF07687 Peptidase dimerisation domain AYM31_RS07715 PF01546 Peptidase family M20/M25/M40 AYM31_RS07720 PF01168 Alanine racemase, N-terminal domain AYM31_RS07720 PF00842 Alanine racemase, C-terminal domain AYM31_RS07725 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AYM31_RS07725 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AYM31_RS07735 PF00313 'Cold-shock' DNA-binding domain AYM31_RS07750 PF00708 Acylphosphatase AYM31_RS07760 PF05816 Toxic anion resistance protein (TelA) AYM31_RS07770 PF05525 Branched-chain amino acid transport protein AYM31_RS07775 PF00092 von Willebrand factor type A domain AYM31_RS07780 PF08406 CbbQ/NirQ/NorQ C-terminal AYM31_RS07780 PF07728 AAA domain (dynein-related subfamily) AYM31_RS07795 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYM31_RS07795 PF00364 Biotin-requiring enzyme AYM31_RS07795 PF02817 e3 binding domain AYM31_RS07800 PF00676 Dehydrogenase E1 component AYM31_RS07800 PF16870 2-oxoglutarate dehydrogenase C-terminal AYM31_RS07800 PF02779 Transketolase, pyrimidine binding domain AYM31_RS07805 PF00512 His Kinase A (phospho-acceptor) domain AYM31_RS07805 PF18719 ArlS sensor domain AYM31_RS07805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS07810 PF00072 Response regulator receiver domain AYM31_RS07810 PF00486 Transcriptional regulatory protein, C terminal AYM31_RS07825 PF01797 Transposase IS200 like AYM31_RS07830 PF01569 PAP2 superfamily AYM31_RS07835 PF04101 Glycosyltransferase family 28 C-terminal domain AYM31_RS07835 PF03033 Glycosyltransferase family 28 N-terminal domain AYM31_RS07845 PF01471 Putative peptidoglycan binding domain AYM31_RS07845 PF03572 Peptidase family S41 AYM31_RS07845 PF13180 PDZ domain AYM31_RS07850 PF06855 YozE SAM-like fold AYM31_RS07855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AYM31_RS07860 PF01641 SelR domain AYM31_RS07865 PF01625 Peptide methionine sulfoxide reductase AYM31_RS07870 PF02645 Uncharacterised protein, DegV family COG1307 AYM31_RS07875 PF00186 Dihydrofolate reductase AYM31_RS07880 PF00303 Thymidylate synthase AYM31_RS07885 PF06491 Disulphide isomerase AYM31_RS07890 PF13769 Virulence factor AYM31_RS07890 PF08712 Scaffold protein Nfu/NifU N terminal AYM31_RS07895 PF13769 Virulence factor AYM31_RS07895 PF08712 Scaffold protein Nfu/NifU N terminal AYM31_RS07900 PF10782 Zinc-finger AYM31_RS07905 PF02592 Putative vitamin uptake transporter AYM31_RS07920 PF01468 GA module AYM31_RS07920 PF04650 YSIRK type signal peptide AYM31_RS07920 PF07564 Domain of Unknown Function (DUF1542) AYM31_RS07925 PF07690 Major Facilitator Superfamily AYM31_RS07930 PF13520 Amino acid permease AYM31_RS07935 PF00291 Pyridoxal-phosphate dependent enzyme AYM31_RS07940 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AYM31_RS07940 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AYM31_RS07945 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AYM31_RS07945 PF01367 5'-3' exonuclease, C-terminal SAM fold AYM31_RS07950 PF00350 Dynamin family AYM31_RS07965 PF02926 THUMP domain AYM31_RS07965 PF01170 Putative RNA methylase family UPF0020 AYM31_RS07975 PF05103 DivIVA protein AYM31_RS07980 PF06908 YspA SLOG family AYM31_RS07995 PF03838 Recombination protein U AYM31_RS08000 PF00905 Penicillin binding protein transpeptidase domain AYM31_RS08000 PF00912 Transglycosylase AYM31_RS08010 PF00730 HhH-GPD superfamily base excision DNA repair protein AYM31_RS08010 PF10576 Iron-sulfur binding domain of endonuclease III AYM31_RS08010 PF00633 Helix-hairpin-helix motif AYM31_RS08015 PF07261 Replication initiation and membrane attachment AYM31_RS08020 PF00152 tRNA synthetases class II (D, K and N) AYM31_RS08020 PF01336 OB-fold nucleic acid binding domain AYM31_RS08025 PF00929 Exonuclease AYM31_RS08025 PF13307 Helicase C-terminal domain AYM31_RS08030 PF02237 Biotin protein ligase C terminal domain AYM31_RS08030 PF03099 Biotin/lipoate A/B protein ligase family AYM31_RS08030 PF08279 HTH domain AYM31_RS08035 PF13735 tRNA nucleotidyltransferase domain 2 putative AYM31_RS08035 PF12627 Probable RNA and SrmB- binding site of polymerase A AYM31_RS08035 PF01743 Poly A polymerase head domain AYM31_RS08040 PF00534 Glycosyl transferases group 1 AYM31_RS08040 PF13439 Glycosyltransferase Family 4 AYM31_RS08045 PF03819 MazG nucleotide pyrophosphohydrolase domain AYM31_RS08050 PF04298 Putative neutral zinc metallopeptidase AYM31_RS08055 PF07187 Protein of unknown function (DUF1405) AYM31_RS08060 PF08858 IDEAL domain AYM31_RS08060 PF08864 UPF0302 domain AYM31_RS08070 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYM31_RS08075 PF01761 3-dehydroquinate synthase AYM31_RS08080 PF01264 Chorismate synthase AYM31_RS08090 PF00334 Nucleoside diphosphate kinase AYM31_RS08095 PF00348 Polyprenyl synthetase AYM31_RS08100 PF01209 ubiE/COQ5 methyltransferase family AYM31_RS08115 PF00216 Bacterial DNA-binding protein AYM31_RS08120 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AYM31_RS08120 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AYM31_RS08125 PF01926 50S ribosome-binding GTPase AYM31_RS08125 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AYM31_RS08130 PF00575 S1 RNA binding domain AYM31_RS08150 PF02224 Cytidylate kinase AYM31_RS08155 PF00710 Asparaginase, N-terminal AYM31_RS08155 PF17763 Glutaminase/Asparaginase C-terminal domain AYM31_RS08170 PF01476 LysM domain AYM31_RS08175 PF00270 DEAD/DEAH box helicase AYM31_RS08175 PF00271 Helicase conserved C-terminal domain AYM31_RS08190 PF12822 ECF transporter, substrate-specific component AYM31_RS08225 PF07968 Leukocidin/Hemolysin toxin family AYM31_RS08230 PF07968 Leukocidin/Hemolysin toxin family AYM31_RS08235 PF01520 N-acetylmuramoyl-L-alanine amidase AYM31_RS08235 PF08460 Bacterial SH3 domain AYM31_RS08235 PF05257 CHAP domain AYM31_RS08250 PF00186 Dihydrofolate reductase AYM31_RS08300 PF01464 Transglycosylase SLT domain AYM31_RS08350 PF00574 Clp protease AYM31_RS08530 PF01381 Helix-turn-helix AYM31_RS08560 PF00589 Phage integrase family AYM31_RS08560 PF14659 Phage integrase, N-terminal SAM-like domain AYM31_RS08580 PF18698 Histidine kinase sensor domain AYM31_RS08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS08580 PF00672 HAMP domain AYM31_RS08580 PF00512 His Kinase A (phospho-acceptor) domain AYM31_RS08585 PF00486 Transcriptional regulatory protein, C terminal AYM31_RS08585 PF00072 Response regulator receiver domain AYM31_RS08590 PF00849 RNA pseudouridylate synthase AYM31_RS08590 PF01479 S4 domain AYM31_RS08595 PF04079 Segregation and condensation complex subunit ScpB AYM31_RS08600 PF02616 Segregation and condensation protein ScpA AYM31_RS08610 PF00589 Phage integrase family AYM31_RS08610 PF02899 Phage integrase, N-terminal SAM-like domain AYM31_RS08615 PF01475 Ferric uptake regulator family AYM31_RS08620 PF00293 NUDIX domain AYM31_RS08625 PF00248 Aldo/keto reductase family AYM31_RS08635 PF00106 short chain dehydrogenase AYM31_RS08640 PF14748 Pyrroline-5-carboxylate reductase dimerisation AYM31_RS08640 PF03807 NADP oxidoreductase coenzyme F420-dependent AYM31_RS08645 PF12706 Beta-lactamase superfamily domain AYM31_RS08650 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AYM31_RS08650 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AYM31_RS08660 PF00128 Alpha amylase, catalytic domain AYM31_RS08660 PF16657 Maltogenic Amylase, C-terminal domain AYM31_RS08665 PF00356 Bacterial regulatory proteins, lacI family AYM31_RS08680 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AYM31_RS08680 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AYM31_RS08685 PF07687 Peptidase dimerisation domain AYM31_RS08685 PF01546 Peptidase family M20/M25/M40 AYM31_RS08695 PF11728 Putative aromatic acid exporter C-terminal domain AYM31_RS08695 PF06081 Aromatic acid exporter family member 1 AYM31_RS08700 PF06491 Disulphide isomerase AYM31_RS08705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AYM31_RS08705 PF00364 Biotin-requiring enzyme AYM31_RS08705 PF02817 e3 binding domain AYM31_RS08710 PF02779 Transketolase, pyrimidine binding domain AYM31_RS08710 PF02780 Transketolase, C-terminal domain AYM31_RS08715 PF00676 Dehydrogenase E1 component AYM31_RS08720 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS08720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AYM31_RS08725 PF13476 AAA domain AYM31_RS08730 PF02863 Arginine repressor, C-terminal domain AYM31_RS08730 PF01316 Arginine repressor, DNA binding domain AYM31_RS08735 PF00348 Polyprenyl synthetase AYM31_RS08740 PF02609 Exonuclease VII small subunit AYM31_RS08745 PF13742 OB-fold nucleic acid binding domain AYM31_RS08745 PF02601 Exonuclease VII, large subunit AYM31_RS08750 PF01029 NusB family AYM31_RS08755 PF03780 Asp23 family, cell envelope-related function AYM31_RS08760 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYM31_RS08760 PF00289 Biotin carboxylase, N-terminal domain AYM31_RS08760 PF02785 Biotin carboxylase C-terminal domain AYM31_RS08765 PF00364 Biotin-requiring enzyme AYM31_RS08770 PF01132 Elongation factor P (EF-P) OB domain AYM31_RS08770 PF09285 Elongation factor P, C-terminal AYM31_RS08770 PF08207 Elongation factor P (EF-P) KOW-like domain AYM31_RS08775 PF00557 Metallopeptidase family M24 AYM31_RS08775 PF01321 Creatinase/Prolidase N-terminal domain AYM31_RS08790 PF03099 Biotin/lipoate A/B protein ligase family AYM31_RS08795 PF00581 Rhodanese-like domain AYM31_RS08800 PF00266 Aminotransferase class-V AYM31_RS08805 PF02347 Glycine cleavage system P-protein AYM31_RS08810 PF01571 Aminomethyltransferase folate-binding domain AYM31_RS08810 PF08669 Glycine cleavage T-protein C-terminal barrel domain AYM31_RS08815 PF01202 Shikimate kinase AYM31_RS08840 PF07963 Prokaryotic N-terminal methylation motif AYM31_RS08845 PF00482 Type II secretion system (T2SS), protein F AYM31_RS08850 PF00437 Type II/IV secretion system protein AYM31_RS08855 PF00753 Metallo-beta-lactamase superfamily AYM31_RS08860 PF01910 Thiamine-binding protein AYM31_RS08865 PF00480 ROK family AYM31_RS08870 PF06014 Bacterial protein of unknown function (DUF910) AYM31_RS08880 PF01812 5-formyltetrahydrofolate cyclo-ligase family AYM31_RS08885 PF00471 Ribosomal protein L33 AYM31_RS08890 PF00905 Penicillin binding protein transpeptidase domain AYM31_RS08890 PF03717 Penicillin-binding Protein dimerisation domain AYM31_RS08895 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AYM31_RS08895 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AYM31_RS08900 PF01475 Ferric uptake regulator family AYM31_RS08905 PF00950 ABC 3 transport family AYM31_RS08910 PF00005 ABC transporter AYM31_RS08915 PF01261 Xylose isomerase-like TIM barrel AYM31_RS08920 PF00270 DEAD/DEAH box helicase AYM31_RS08920 PF00271 Helicase conserved C-terminal domain AYM31_RS08925 PF01784 NIF3 (NGG1p interacting factor 3) AYM31_RS08930 PF04816 tRNA (adenine(22)-N(1))-methyltransferase AYM31_RS08935 PF00140 Sigma-70 factor, region 1.2 AYM31_RS08935 PF03979 Sigma-70 factor, region 1.1 AYM31_RS08935 PF04542 Sigma-70 region 2 AYM31_RS08935 PF04545 Sigma-70, region 4 AYM31_RS08935 PF04539 Sigma-70 region 3 AYM31_RS08940 PF01807 CHC2 zinc finger AYM31_RS08940 PF08275 DNA primase catalytic core, N-terminal domain AYM31_RS08940 PF00772 DnaB-like helicase N terminal domain AYM31_RS08945 PF03618 Kinase/pyrophosphorylase AYM31_RS08950 PF00571 CBS domain AYM31_RS08950 PF08279 HTH domain AYM31_RS08955 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYM31_RS08955 PF03129 Anticodon binding domain AYM31_RS08960 PF02565 Recombination protein O C terminal AYM31_RS08960 PF11967 Recombination protein O N terminal AYM31_RS08965 PF07650 KH domain AYM31_RS08965 PF01926 50S ribosome-binding GTPase AYM31_RS08970 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYM31_RS08980 PF02130 Uncharacterized protein family UPF0054 AYM31_RS08985 PF02562 PhoH-like protein AYM31_RS08995 PF12127 SigmaW regulon antibacterial AYM31_RS09000 PF01957 NfeD-like C-terminal, partner-binding AYM31_RS09000 PF01972 Serine dehydrogenase proteinase AYM31_RS09005 PF01165 Ribosomal protein S21 AYM31_RS09010 PF00919 Uncharacterized protein family UPF0004 AYM31_RS09010 PF01938 TRAM domain AYM31_RS09010 PF04055 Radical SAM superfamily AYM31_RS09015 PF04452 RNA methyltransferase AYM31_RS09025 PF00226 DnaJ domain AYM31_RS09025 PF00684 DnaJ central domain AYM31_RS09025 PF01556 DnaJ C terminal domain AYM31_RS09030 PF00012 Hsp70 protein AYM31_RS09035 PF01025 GrpE AYM31_RS09040 PF01628 HrcA protein C terminal domain AYM31_RS09045 PF06969 HemN C-terminal domain AYM31_RS09045 PF04055 Radical SAM superfamily AYM31_RS09055 PF03144 Elongation factor Tu domain 2 AYM31_RS09055 PF00679 Elongation factor G C-terminus AYM31_RS09055 PF00009 Elongation factor Tu GTP binding domain AYM31_RS09055 PF06421 GTP-binding protein LepA C-terminus AYM31_RS09060 PF01649 Ribosomal protein S20 AYM31_RS09065 PF06144 DNA polymerase III, delta subunit AYM31_RS09070 PF00753 Metallo-beta-lactamase superfamily AYM31_RS09070 PF03772 Competence protein AYM31_RS09070 PF13567 Domain of unknown function (DUF4131) AYM31_RS09075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYM31_RS09085 PF13649 Methyltransferase domain AYM31_RS09095 PF01966 HD domain AYM31_RS09100 PF01467 Cytidylyltransferase-like AYM31_RS09105 PF01985 CRS1 / YhbY (CRM) domain AYM31_RS09110 PF08501 Shikimate dehydrogenase substrate binding domain AYM31_RS09110 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AYM31_RS09110 PF01488 Shikimate / quinate 5-dehydrogenase AYM31_RS09115 PF01926 50S ribosome-binding GTPase AYM31_RS09125 PF01048 Phosphorylase superfamily AYM31_RS09135 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain AYM31_RS09140 PF12728 Helix-turn-helix domain AYM31_RS09140 PF02661 Fic/DOC family AYM31_RS09145 PF01566 Natural resistance-associated macrophage protein AYM31_RS09150 PF03746 LamB/YcsF family AYM31_RS09155 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AYM31_RS09155 PF02785 Biotin carboxylase C-terminal domain AYM31_RS09155 PF00289 Biotin carboxylase, N-terminal domain AYM31_RS09160 PF00364 Biotin-requiring enzyme AYM31_RS09165 PF02626 Carboxyltransferase domain, subdomain A and B AYM31_RS09170 PF02682 Carboxyltransferase domain, subdomain C and D AYM31_RS09175 PF03449 Transcription elongation factor, N-terminal AYM31_RS09175 PF01272 Transcription elongation factor, GreA/GreB, C-term AYM31_RS09180 PF00485 Phosphoribulokinase / Uridine kinase family AYM31_RS09185 PF01136 Peptidase family U32 AYM31_RS09185 PF16325 Peptidase family U32 C-terminal domain AYM31_RS09190 PF01136 Peptidase family U32 AYM31_RS09200 PF06949 Protein of unknown function (DUF1292) AYM31_RS09205 PF03652 Holliday junction resolvase AYM31_RS09210 PF06135 IreB regulatory phosphoprotein AYM31_RS09215 PF02272 DHHA1 domain AYM31_RS09215 PF01411 tRNA synthetases class II (A) AYM31_RS09215 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYM31_RS09220 PF13538 UvrD-like helicase C-terminal domain AYM31_RS09220 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain AYM31_RS09220 PF14490 Helix-hairpin-helix containing domain AYM31_RS09240 PF00266 Aminotransferase class-V AYM31_RS09245 PF00296 Luciferase-like monooxygenase AYM31_RS09255 PF05532 CsbD-like AYM31_RS09260 PF02082 Transcriptional regulator AYM31_RS09265 PF12002 MgsA AAA+ ATPase C terminal AYM31_RS09265 PF05496 Holliday junction DNA helicase RuvB P-loop domain AYM31_RS09265 PF16193 AAA C-terminal domain AYM31_RS09270 PF00899 ThiF family AYM31_RS09285 PF02938 GAD domain AYM31_RS09285 PF00152 tRNA synthetases class II (D, K and N) AYM31_RS09285 PF01336 OB-fold nucleic acid binding domain AYM31_RS09290 PF13393 Histidyl-tRNA synthetase AYM31_RS09290 PF03129 Anticodon binding domain AYM31_RS09295 PF08239 Bacterial SH3 domain AYM31_RS09295 PF01520 N-acetylmuramoyl-L-alanine amidase AYM31_RS09300 PF02580 D-Tyr-tRNA(Tyr) deacylase AYM31_RS09305 PF04607 Region found in RelA / SpoT proteins AYM31_RS09305 PF02824 TGS domain AYM31_RS09305 PF13291 ACT domain AYM31_RS09310 PF00156 Phosphoribosyl transferase domain AYM31_RS09315 PF10141 Single-strand DNA-specific exonuclease, C terminal domain AYM31_RS09315 PF01368 DHH family AYM31_RS09315 PF02272 DHHA1 domain AYM31_RS09315 PF17768 RecJ OB domain AYM31_RS09320 PF07549 SecD/SecF GG Motif AYM31_RS09320 PF02355 Protein export membrane protein AYM31_RS09325 PF02699 Preprotein translocase subunit AYM31_RS09330 PF01702 Queuine tRNA-ribosyltransferase AYM31_RS09335 PF02547 Queuosine biosynthesis protein AYM31_RS09340 PF05491 RuvB C-terminal winged helix domain AYM31_RS09340 PF05496 Holliday junction DNA helicase RuvB P-loop domain AYM31_RS09340 PF17864 RuvB AAA lid domain AYM31_RS09345 PF07499 RuvA, C-terminal domain AYM31_RS09345 PF01330 RuvA N terminal domain AYM31_RS09355 PF01926 50S ribosome-binding GTPase AYM31_RS09355 PF09269 Domain of unknown function (DUF1967) AYM31_RS09355 PF01018 GTP1/OBG AYM31_RS09360 PF01016 Ribosomal L27 protein AYM31_RS09365 PF04327 Cysteine protease Prp AYM31_RS09370 PF00829 Ribosomal prokaryotic L21 protein AYM31_RS09405 PF04002 RadC-like JAB domain AYM31_RS09410 PF01478 Type IV leader peptidase family AYM31_RS09410 PF06750 Bacterial Peptidase A24 N-terminal domain AYM31_RS09420 PF08245 Mur ligase middle domain AYM31_RS09420 PF02875 Mur ligase family, glutamate ligase domain AYM31_RS09425 PF08264 Anticodon-binding domain of tRNA AYM31_RS09425 PF10458 Valyl tRNA synthetase tRNA binding arm AYM31_RS09425 PF00133 tRNA synthetases class I (I, L, M and V) AYM31_RS09430 PF03352 Methyladenine glycosylase AYM31_RS09445 PF00202 Aminotransferase class-III AYM31_RS09450 PF00490 Delta-aminolevulinic acid dehydratase AYM31_RS09460 PF03900 Porphobilinogen deaminase, C-terminal domain AYM31_RS09460 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AYM31_RS09465 PF01578 Cytochrome C assembly protein AYM31_RS09470 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AYM31_RS09470 PF01488 Shikimate / quinate 5-dehydrogenase AYM31_RS09470 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AYM31_RS09475 PF01926 50S ribosome-binding GTPase AYM31_RS09480 PF06689 ClpX C4-type zinc finger AYM31_RS09480 PF07724 AAA domain (Cdc48 subfamily) AYM31_RS09480 PF10431 C-terminal, D2-small domain, of ClpB protein AYM31_RS09485 PF05698 Bacterial trigger factor protein (TF) C-terminus AYM31_RS09485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AYM31_RS09485 PF05697 Bacterial trigger factor protein (TF) AYM31_RS09510 PF00453 Ribosomal protein L20 AYM31_RS09515 PF01632 Ribosomal protein L35 AYM31_RS09520 PF05198 Translation initiation factor IF-3, N-terminal domain AYM31_RS09520 PF00707 Translation initiation factor IF-3, C-terminal domain AYM31_RS09525 PF00324 Amino acid permease AYM31_RS09530 PF03129 Anticodon binding domain AYM31_RS09530 PF02824 TGS domain AYM31_RS09530 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AYM31_RS09530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AYM31_RS09540 PF07319 Primosomal protein DnaI N-terminus AYM31_RS09540 PF01695 IstB-like ATP binding protein AYM31_RS09550 PF03477 ATP cone domain AYM31_RS09555 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYM31_RS09555 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AYM31_RS09560 PF01121 Dephospho-CoA kinase AYM31_RS09565 PF06827 Zinc finger found in FPG and IleRS AYM31_RS09565 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AYM31_RS09565 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AYM31_RS09570 PF00476 DNA polymerase family A AYM31_RS09570 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AYM31_RS09570 PF01367 5'-3' exonuclease, C-terminal SAM fold AYM31_RS09580 PF00512 His Kinase A (phospho-acceptor) domain AYM31_RS09580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS09580 PF16736 Single Cache-like AYM31_RS09580 PF00989 PAS fold AYM31_RS09585 PF00072 Response regulator receiver domain AYM31_RS09585 PF00486 Transcriptional regulatory protein, C terminal AYM31_RS09595 PF00180 Isocitrate/isopropylmalate dehydrogenase AYM31_RS09600 PF00285 Citrate synthase, C-terminal domain AYM31_RS09605 PF00324 Amino acid permease AYM31_RS09615 PF02887 Pyruvate kinase, alpha/beta domain AYM31_RS09615 PF00224 Pyruvate kinase, barrel domain AYM31_RS09615 PF00391 PEP-utilising enzyme, mobile domain AYM31_RS09620 PF00365 Phosphofructokinase AYM31_RS09625 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AYM31_RS09630 PF01039 Carboxyl transferase domain AYM31_RS09630 PF17848 Acetyl-coA carboxylase zinc finger domain AYM31_RS09635 PF00390 Malic enzyme, N-terminal domain AYM31_RS09635 PF03949 Malic enzyme, NAD binding domain AYM31_RS09640 PF07733 Bacterial DNA polymerase III alpha NTPase domain AYM31_RS09640 PF02811 PHP domain AYM31_RS09640 PF14579 Helix-hairpin-helix motif AYM31_RS09640 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AYM31_RS09640 PF01336 OB-fold nucleic acid binding domain AYM31_RS09645 PF02272 DHHA1 domain AYM31_RS09645 PF01368 DHH family AYM31_RS09650 PF07085 DRTGG domain AYM31_RS09650 PF00392 Bacterial regulatory proteins, gntR family AYM31_RS09650 PF00571 CBS domain AYM31_RS09650 PF03061 Thioesterase superfamily AYM31_RS09665 PF00557 Metallopeptidase family M24 AYM31_RS09665 PF01321 Creatinase/Prolidase N-terminal domain AYM31_RS09675 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AYM31_RS09675 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AYM31_RS09680 PF00582 Universal stress protein family AYM31_RS09685 PF00871 Acetokinase family AYM31_RS09690 PF02384 N-6 DNA Methylase AYM31_RS09695 PF08534 Redoxin AYM31_RS09700 PF01925 Sulfite exporter TauE/SafE AYM31_RS09705 PF02568 Thiamine biosynthesis protein (ThiI) AYM31_RS09705 PF02926 THUMP domain AYM31_RS09710 PF00266 Aminotransferase class-V AYM31_RS09720 PF06160 Septation ring formation regulator, EzrA AYM31_RS09725 PF13185 GAF domain AYM31_RS09730 PF00163 Ribosomal protein S4/S9 N-terminal domain AYM31_RS09730 PF01479 S4 domain AYM31_RS09740 PF03009 Glycerophosphoryl diester phosphodiesterase family AYM31_RS09745 PF02566 OsmC-like protein AYM31_RS09750 PF00266 Aminotransferase class-V AYM31_RS09755 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYM31_RS09755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYM31_RS09755 PF01842 ACT domain AYM31_RS09770 PF00367 phosphotransferase system, EIIB AYM31_RS09770 PF02378 Phosphotransferase system, EIIC AYM31_RS09775 PF01553 Acyltransferase AYM31_RS09780 PF13180 PDZ domain AYM31_RS09785 PF00579 tRNA synthetases class I (W and Y) AYM31_RS09785 PF01479 S4 domain AYM31_RS09790 PF00912 Transglycosylase AYM31_RS09790 PF00905 Penicillin binding protein transpeptidase domain AYM31_RS09800 PF04650 YSIRK type signal peptide AYM31_RS09800 PF05031 Iron Transport-associated domain AYM31_RS09805 PF01268 Formate--tetrahydrofolate ligase AYM31_RS09810 PF13193 AMP-binding enzyme C-terminal domain AYM31_RS09810 PF00501 AMP-binding enzyme AYM31_RS09815 PF00583 Acetyltransferase (GNAT) family AYM31_RS09820 PF00850 Histone deacetylase domain AYM31_RS09825 PF00356 Bacterial regulatory proteins, lacI family AYM31_RS09835 PF00793 DAHP synthetase I family AYM31_RS09835 PF01817 Chorismate mutase type II AYM31_RS09850 PF06103 Bacterial protein of unknown function (DUF948) AYM31_RS09855 PF08245 Mur ligase middle domain AYM31_RS09855 PF02875 Mur ligase family, glutamate ligase domain AYM31_RS09855 PF01225 Mur ligase family, catalytic domain AYM31_RS09860 PF09397 Ftsk gamma domain AYM31_RS09860 PF17854 FtsK alpha domain AYM31_RS09860 PF01580 FtsK/SpoIIIE family AYM31_RS09865 PF14794 Domain of unknown function (DUF4479) AYM31_RS09865 PF01588 Putative tRNA binding domain AYM31_RS09870 PF07285 Protein of unknown function (DUF1444) AYM31_RS09875 PF00085 Thioredoxin AYM31_RS09880 PF05343 M42 glutamyl aminopeptidase AYM31_RS09890 PF00753 Metallo-beta-lactamase superfamily AYM31_RS09895 PF02390 Putative methyltransferase AYM31_RS09900 PF01636 Phosphotransferase enzyme family AYM31_RS09905 PF01063 Amino-transferase class IV AYM31_RS09910 PF01546 Peptidase family M20/M25/M40 AYM31_RS09930 PF00849 RNA pseudouridylate synthase AYM31_RS09930 PF01479 S4 domain AYM31_RS09935 PF14667 Polysaccharide biosynthesis C-terminal domain AYM31_RS09935 PF01943 Polysaccharide biosynthesis protein AYM31_RS09945 PF07564 Domain of Unknown Function (DUF1542) AYM31_RS09945 PF01468 GA module AYM31_RS09945 PF04650 YSIRK type signal peptide AYM31_RS09955 PF09334 tRNA synthetases class I (M) AYM31_RS09955 PF13603 Leucyl-tRNA synthetase, Domain 2 AYM31_RS09955 PF00133 tRNA synthetases class I (I, L, M and V) AYM31_RS09955 PF08264 Anticodon-binding domain of tRNA AYM31_RS09960 PF07690 Major Facilitator Superfamily AYM31_RS09965 PF04055 Radical SAM superfamily AYM31_RS09965 PF16199 Radical_SAM C-terminal domain AYM31_RS09970 PF06962 Putative rRNA methylase AYM31_RS09975 PF01047 MarR family AYM31_RS09985 PF12146 Serine aminopeptidase, S33 AYM31_RS10000 PF01619 Proline dehydrogenase AYM31_RS10005 PF00885 6,7-dimethyl-8-ribityllumazine synthase AYM31_RS10010 PF00925 GTP cyclohydrolase II AYM31_RS10010 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AYM31_RS10015 PF00677 Lumazine binding domain AYM31_RS10020 PF01872 RibD C-terminal domain AYM31_RS10020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AYM31_RS10030 PF01022 Bacterial regulatory protein, arsR family AYM31_RS10035 PF02040 Arsenical pump membrane protein AYM31_RS10040 PF01451 Low molecular weight phosphotyrosine protein phosphatase AYM31_RS10045 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AYM31_RS10045 PF13457 GW (Gly-Tryp) dipeptide domain AYM31_RS10055 PF00196 Bacterial regulatory proteins, luxR family AYM31_RS10055 PF04542 Sigma-70 region 2 AYM31_RS10075 PF00923 Transaldolase/Fructose-6-phosphate aldolase AYM31_RS10085 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AYM31_RS10090 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AYM31_RS10100 PF00248 Aldo/keto reductase family AYM31_RS10110 PF02773 S-adenosylmethionine synthetase, C-terminal domain AYM31_RS10110 PF02772 S-adenosylmethionine synthetase, central domain AYM31_RS10110 PF00438 S-adenosylmethionine synthetase, N-terminal domain AYM31_RS10115 PF01293 Phosphoenolpyruvate carboxykinase AYM31_RS10125 PF00326 Prolyl oligopeptidase family AYM31_RS10135 PF01809 Putative membrane protein insertion efficiency factor AYM31_RS10145 PF00501 AMP-binding enzyme AYM31_RS10145 PF13193 AMP-binding enzyme C-terminal domain AYM31_RS10215 PF01610 Transposase AYM31_RS10215 PF13683 Integrase core domain AYM31_RS10235 PF12161 HsdM N-terminal domain AYM31_RS10235 PF02384 N-6 DNA Methylase AYM31_RS10250 PF00089 Trypsin AYM31_RS10260 PF00089 Trypsin AYM31_RS10265 PF00089 Trypsin AYM31_RS10270 PF00089 Trypsin AYM31_RS10295 PF00005 ABC transporter AYM31_RS10300 PF00082 Subtilase family AYM31_RS10305 PF02441 Flavoprotein AYM31_RS10310 PF05147 Lanthionine synthetase C-like protein AYM31_RS10315 PF14028 Lantibiotic biosynthesis dehydratase C-term AYM31_RS10315 PF04738 Lantibiotic dehydratase, N terminus AYM31_RS10320 PF02052 Gallidermin AYM31_RS10335 PF07968 Leukocidin/Hemolysin toxin family AYM31_RS10340 PF07968 Leukocidin/Hemolysin toxin family AYM31_RS10410 PF01593 Flavin containing amine oxidoreductase AYM31_RS10415 PF00762 Ferrochelatase AYM31_RS10420 PF01208 Uroporphyrinogen decarboxylase (URO-D) AYM31_RS10440 PF00005 ABC transporter AYM31_RS10445 PF01230 HIT domain AYM31_RS10465 PF00639 PPIC-type PPIASE domain AYM31_RS10470 PF01966 HD domain AYM31_RS10480 PF00149 Calcineurin-like phosphoesterase AYM31_RS10495 PF06133 Control of competence regulator ComK, YlbF/YmcA AYM31_RS10500 PF04286 Protein of unknown function (DUF445) AYM31_RS10510 PF00196 Bacterial regulatory proteins, luxR family AYM31_RS10510 PF00072 Response regulator receiver domain AYM31_RS10515 PF13185 GAF domain AYM31_RS10515 PF07730 Histidine kinase AYM31_RS10520 PF00849 RNA pseudouridylate synthase AYM31_RS10520 PF01479 S4 domain AYM31_RS10525 PF10415 Fumarase C C-terminus AYM31_RS10525 PF00206 Lyase AYM31_RS10555 PF00588 SpoU rRNA Methylase family AYM31_RS10560 PF08331 Domain of unknown function (DUF1730) AYM31_RS10565 PF00005 ABC transporter AYM31_RS10570 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS10735 PF01475 Ferric uptake regulator family AYM31_RS10740 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYM31_RS10740 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYM31_RS10745 PF00578 AhpC/TSA family AYM31_RS10750 PF00202 Aminotransferase class-III AYM31_RS10755 PF06081 Aromatic acid exporter family member 1 AYM31_RS10765 PF00664 ABC transporter transmembrane region AYM31_RS10765 PF00005 ABC transporter AYM31_RS10770 PF04167 Protein of unknown function (DUF402) AYM31_RS10775 PF00633 Helix-hairpin-helix motif AYM31_RS10775 PF00730 HhH-GPD superfamily base excision DNA repair protein AYM31_RS10775 PF14815 NUDIX domain AYM31_RS10780 PF04307 LexA-binding, inner membrane-associated putative hydrolase AYM31_RS10795 PF00005 ABC transporter AYM31_RS10795 PF01476 LysM domain AYM31_RS10805 PF02631 RecX family AYM31_RS10810 PF00912 Transglycosylase AYM31_RS10815 PF01965 DJ-1/PfpI family AYM31_RS10825 PF04055 Radical SAM superfamily AYM31_RS10825 PF08756 YfkB-like domain AYM31_RS10830 PF03061 Thioesterase superfamily AYM31_RS10835 PF02073 Thermophilic metalloprotease (M29) AYM31_RS10840 PF06569 Protein of unknown function (DUF1128) AYM31_RS10845 PF01451 Low molecular weight phosphotyrosine protein phosphatase AYM31_RS10855 PF03631 Virulence factor BrkB AYM31_RS10860 PF00072 Response regulator receiver domain AYM31_RS10860 PF00196 Bacterial regulatory proteins, luxR family AYM31_RS10865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS10865 PF07730 Histidine kinase AYM31_RS10880 PF00557 Metallopeptidase family M24 AYM31_RS10885 PF06081 Aromatic acid exporter family member 1 AYM31_RS10905 PF07685 CobB/CobQ-like glutamine amidotransferase domain AYM31_RS10910 PF08353 Domain of unknown function (DUF1727) AYM31_RS10910 PF08245 Mur ligase middle domain AYM31_RS10915 PF00210 Ferritin-like domain AYM31_RS10930 PF11799 impB/mucB/samB family C-terminal domain AYM31_RS10930 PF00817 impB/mucB/samB family AYM31_RS10940 PF05958 tRNA (Uracil-5-)-methyltransferase AYM31_RS10945 PF00781 Diacylglycerol kinase catalytic domain AYM31_RS10960 PF02934 GatB/GatE catalytic domain AYM31_RS10960 PF02637 GatB domain AYM31_RS10965 PF01425 Amidase AYM31_RS10970 PF02686 Glu-tRNAGln amidotransferase C subunit AYM31_RS10975 PF00474 Sodium:solute symporter family AYM31_RS10980 PF07537 CamS sex pheromone cAM373 precursor AYM31_RS10985 PF03120 NAD-dependent DNA ligase OB-fold domain AYM31_RS10985 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AYM31_RS10985 PF12826 Helix-hairpin-helix motif AYM31_RS10985 PF00533 BRCA1 C Terminus (BRCT) domain AYM31_RS10985 PF01653 NAD-dependent DNA ligase adenylation domain AYM31_RS10990 PF00580 UvrD/REP helicase N-terminal domain AYM31_RS10990 PF13361 UvrD-like helicase C-terminal domain AYM31_RS10995 PF01884 PcrB family AYM31_RS11000 PF01371 Trp repressor protein AYM31_RS11005 PF10397 Adenylosuccinate lyase C-terminus AYM31_RS11005 PF00206 Lyase AYM31_RS11015 PF05543 Staphopain peptidase C47 AYM31_RS11015 PF14731 Staphopain proregion AYM31_RS11025 PF14044 NETI protein AYM31_RS11030 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) AYM31_RS11035 PF02540 NAD synthase AYM31_RS11040 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AYM31_RS11040 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AYM31_RS11040 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain AYM31_RS11045 PF02898 Nitric oxide synthase, oxygenase domain AYM31_RS11050 PF01842 ACT domain AYM31_RS11050 PF00800 Prephenate dehydratase AYM31_RS11060 PF00939 Sodium:sulfate symporter transmembrane region AYM31_RS11070 PF00857 Isochorismatase family AYM31_RS11075 PF02833 DHHA2 domain AYM31_RS11075 PF01368 DHH family AYM31_RS11085 PF00171 Aldehyde dehydrogenase family AYM31_RS11090 PF10282 Lactonase, 7-bladed beta-propeller AYM31_RS11135 PF00005 ABC transporter AYM31_RS11145 PF00005 ABC transporter AYM31_RS11150 PF00392 Bacterial regulatory proteins, gntR family AYM31_RS11170 PF03642 MAP domain AYM31_RS11175 PF03642 MAP domain AYM31_RS11180 PF03372 Endonuclease/Exonuclease/phosphatase family AYM31_RS11200 PF11546 Staphylococcal complement inhibitor SCIN AYM31_RS11205 PF11434 Chemotaxis-inhibiting protein CHIPS AYM31_RS11210 PF05257 CHAP domain AYM31_RS11210 PF08460 Bacterial SH3 domain AYM31_RS11210 PF01520 N-acetylmuramoyl-L-alanine amidase AYM31_RS11230 PF02821 Staphylokinase/Streptokinase family AYM31_RS11235 PF08460 Bacterial SH3 domain AYM31_RS11235 PF01510 N-acetylmuramoyl-L-alanine amidase AYM31_RS11235 PF05257 CHAP domain AYM31_RS11280 PF04225 Opacity-associated protein A LysM-like domain AYM31_RS11280 PF01551 Peptidase family M23 AYM31_RS11330 PF00574 Clp protease AYM31_RS11385 PF00692 dUTPase AYM31_RS11430 PF00436 Single-strand binding protein family AYM31_RS11505 PF00717 Peptidase S24-like AYM31_RS11505 PF01726 LexA DNA binding domain AYM31_RS11535 PF03372 Endonuclease/Exonuclease/phosphatase family AYM31_RS11540 PF07968 Leukocidin/Hemolysin toxin family AYM31_RS11545 PF07968 Leukocidin/Hemolysin toxin family AYM31_RS11550 PF07687 Peptidase dimerisation domain AYM31_RS11550 PF01546 Peptidase family M20/M25/M40 AYM31_RS11560 PF04072 Leucine carboxyl methyltransferase AYM31_RS11565 PF01497 Periplasmic binding protein AYM31_RS11570 PF02386 Cation transport protein AYM31_RS11590 PF10668 Phage terminase small subunit AYM31_RS11590 PF03592 Terminase small subunit AYM31_RS11605 PF00118 TCP-1/cpn60 chaperonin family AYM31_RS11610 PF00166 Chaperonin 10 Kd subunit AYM31_RS11615 PF02517 CPBP intramembrane metalloprotease AYM31_RS11635 PF00795 Carbon-nitrogen hydrolase AYM31_RS11640 PF05372 Delta lysin family AYM31_RS11645 PF04647 Accessory gene regulator B AYM31_RS11660 PF04397 LytTr DNA-binding domain AYM31_RS11660 PF00072 Response regulator receiver domain AYM31_RS11670 PF00294 pfkB family carbohydrate kinase AYM31_RS11675 PF08244 Glycosyl hydrolases family 32 C terminal AYM31_RS11675 PF00251 Glycosyl hydrolases family 32 N-terminal domain AYM31_RS11680 PF00356 Bacterial regulatory proteins, lacI family AYM31_RS11680 PF13407 Periplasmic binding protein domain AYM31_RS11685 PF00909 Ammonium Transporter Family AYM31_RS11690 PF01206 Sulfurtransferase TusA AYM31_RS11695 PF04143 Sulphur transport AYM31_RS11700 PF02629 CoA binding domain AYM31_RS11700 PF06971 Putative DNA-binding protein N-terminus AYM31_RS11705 PF12848 ABC transporter AYM31_RS11705 PF00005 ABC transporter AYM31_RS11705 PF16326 ABC transporter C-terminal domain AYM31_RS11715 PF05188 MutS domain II AYM31_RS11715 PF01624 MutS domain I AYM31_RS11715 PF05192 MutS domain III AYM31_RS11715 PF05190 MutS family domain IV AYM31_RS11715 PF00488 MutS domain V AYM31_RS11720 PF00814 Glycoprotease family AYM31_RS11725 PF00583 Acetyltransferase (GNAT) family AYM31_RS11730 PF00814 Glycoprotease family AYM31_RS11735 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AYM31_RS11745 PF00920 Dehydratase family AYM31_RS11750 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYM31_RS11750 PF00205 Thiamine pyrophosphate enzyme, central domain AYM31_RS11750 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYM31_RS11760 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AYM31_RS11760 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AYM31_RS11765 PF08502 LeuA allosteric (dimerisation) domain AYM31_RS11765 PF00682 HMGL-like AYM31_RS11770 PF00180 Isocitrate/isopropylmalate dehydrogenase AYM31_RS11775 PF00330 Aconitase family (aconitate hydratase) AYM31_RS11780 PF00694 Aconitase C-terminal domain AYM31_RS11785 PF00291 Pyridoxal-phosphate dependent enzyme AYM31_RS11785 PF00585 C-terminal regulatory domain of Threonine dehydratase AYM31_RS11830 PF17283 SprT-like zinc ribbon domain AYM31_RS11830 PF10263 SprT-like family AYM31_RS11835 PF17674 HHH domain AYM31_RS11835 PF00575 S1 RNA binding domain AYM31_RS11835 PF16921 Tex protein YqgF-like domain AYM31_RS11835 PF09371 Tex-like protein N-terminal domain AYM31_RS11840 PF04539 Sigma-70 region 3 AYM31_RS11840 PF04545 Sigma-70, region 4 AYM31_RS11840 PF04542 Sigma-70 region 2 AYM31_RS11845 PF13581 Histidine kinase-like ATPase domain AYM31_RS11850 PF01740 STAS domain AYM31_RS11855 PF07228 Stage II sporulation protein E (SpoIIE) AYM31_RS11855 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain AYM31_RS11865 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system AYM31_RS11875 PF00842 Alanine racemase, C-terminal domain AYM31_RS11875 PF01168 Alanine racemase, N-terminal domain AYM31_RS11880 PF01648 4'-phosphopantetheinyl transferase superfamily AYM31_RS11890 PF03703 Bacterial PH domain AYM31_RS11900 PF02669 K+-transporting ATPase, c chain AYM31_RS11910 PF03814 Potassium-transporting ATPase A subunit AYM31_RS11920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS11920 PF02702 Osmosensitive K+ channel His kinase sensor domain AYM31_RS11920 PF00512 His Kinase A (phospho-acceptor) domain AYM31_RS11920 PF13493 Domain of unknown function (DUF4118) AYM31_RS11925 PF00486 Transcriptional regulatory protein, C terminal AYM31_RS11925 PF00072 Response regulator receiver domain AYM31_RS11930 PF00271 Helicase conserved C-terminal domain AYM31_RS11930 PF00270 DEAD/DEAH box helicase AYM31_RS11935 PF01225 Mur ligase family, catalytic domain AYM31_RS11935 PF08245 Mur ligase middle domain AYM31_RS11935 PF02875 Mur ligase family, glutamate ligase domain AYM31_RS11940 PF01820 D-ala D-ala ligase N-terminus AYM31_RS11940 PF07478 D-ala D-ala ligase C-terminus AYM31_RS11945 PF01098 Cell cycle protein AYM31_RS11960 PF02583 Metal-sensitive transcriptional repressor AYM31_RS11965 PF13091 PLD-like domain AYM31_RS11965 PF13396 Phospholipase_D-nuclease N-terminal AYM31_RS11970 PF01966 HD domain AYM31_RS11990 PF02096 60Kd inner membrane protein AYM31_RS11995 PF02581 Thiamine monophosphate synthase AYM31_RS12000 PF02110 Hydroxyethylthiazole kinase family AYM31_RS12005 PF08543 Phosphomethylpyrimidine kinase AYM31_RS12010 PF03070 TENA/THI-4/PQQC family AYM31_RS12015 PF06737 Transglycosylase-like domain AYM31_RS12020 PF00436 Single-strand binding protein family AYM31_RS12030 PF07977 FabA-like domain AYM31_RS12035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYM31_RS12050 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AYM31_RS12050 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AYM31_RS12055 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYM31_RS12055 PF02874 ATP synthase alpha/beta family, beta-barrel domain AYM31_RS12060 PF00231 ATP synthase AYM31_RS12065 PF00306 ATP synthase alpha/beta chain, C terminal domain AYM31_RS12065 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYM31_RS12065 PF02874 ATP synthase alpha/beta family, beta-barrel domain AYM31_RS12070 PF00213 ATP synthase delta (OSCP) subunit AYM31_RS12075 PF00430 ATP synthase B/B' CF(0) AYM31_RS12080 PF00137 ATP synthase subunit C AYM31_RS12085 PF00119 ATP synthase A chain AYM31_RS12095 PF02350 UDP-N-acetylglucosamine 2-epimerase AYM31_RS12105 PF00464 Serine hydroxymethyltransferase AYM31_RS12110 PF04260 Protein of unknown function (DUF436) AYM31_RS12115 PF01451 Low molecular weight phosphotyrosine protein phosphatase AYM31_RS12120 PF01300 Telomere recombination AYM31_RS12120 PF03481 Putative GTP-binding controlling metal-binding AYM31_RS12125 PF17827 PrmC N-terminal domain AYM31_RS12125 PF05175 Methyltransferase small domain AYM31_RS12130 PF00472 RF-1 domain AYM31_RS12130 PF03462 PCRF domain AYM31_RS12135 PF00265 Thymidine kinase AYM31_RS12145 PF01197 Ribosomal protein L31 AYM31_RS12150 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AYM31_RS12150 PF07498 Rho termination factor, N-terminal domain AYM31_RS12150 PF07497 Rho termination factor, RNA-binding domain AYM31_RS12155 PF00171 Aldehyde dehydrogenase family AYM31_RS12165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AYM31_RS12170 PF01116 Fructose-bisphosphate aldolase class-II AYM31_RS12180 PF06418 CTP synthase N-terminus AYM31_RS12180 PF00117 Glutamine amidotransferase class-I AYM31_RS12185 PF05066 HB1, ASXL, restriction endonuclease HTH domain AYM31_RS12195 PF03630 Fumble AYM31_RS12215 PF02664 S-Ribosylhomocysteinase (LuxS) AYM31_RS12225 PF02885 Glycosyl transferase family, helical bundle domain AYM31_RS12225 PF00591 Glycosyl transferase family, a/b domain AYM31_RS12225 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AYM31_RS12235 PF01791 DeoC/LacD family aldolase AYM31_RS12240 PF01048 Phosphorylase superfamily AYM31_RS12245 PF00210 Ferritin-like domain AYM31_RS12265 PF01238 Phosphomannose isomerase type I AYM31_RS12270 PF13460 NAD(P)H-binding AYM31_RS12275 PF01022 Bacterial regulatory protein, arsR family AYM31_RS12280 PF16916 Dimerisation domain of Zinc Transporter AYM31_RS12280 PF01545 Cation efflux family AYM31_RS12295 PF00239 Resolvase, N terminal domain AYM31_RS12295 PF02796 Helix-turn-helix domain of resolvase AYM31_RS12315 PF00005 ABC transporter AYM31_RS12320 PF01380 SIS domain AYM31_RS12325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYM31_RS12325 PF02378 Phosphotransferase system, EIIC AYM31_RS12330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYM31_RS12330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYM31_RS12330 PF00874 PRD domain AYM31_RS12330 PF05043 Mga helix-turn-helix domain AYM31_RS12330 PF08279 HTH domain AYM31_RS12335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYM31_RS12340 PF01232 Mannitol dehydrogenase Rossmann domain AYM31_RS12340 PF08125 Mannitol dehydrogenase C-terminal domain AYM31_RS12350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYM31_RS12350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYM31_RS12350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYM31_RS12350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYM31_RS12360 PF02457 DisA bacterial checkpoint controller nucleotide-binding AYM31_RS12365 PF00491 Arginase family AYM31_RS12430 PF10609 NUBPL iron-transfer P-loop NTPase AYM31_RS12435 PF07690 Major Facilitator Superfamily AYM31_RS12440 PF17080 Multidrug Resistance efflux pump AYM31_RS12445 PF07690 Major Facilitator Superfamily AYM31_RS12450 PF03006 Haemolysin-III related AYM31_RS12455 PF01704 UTP--glucose-1-phosphate uridylyltransferase AYM31_RS12460 PF04307 LexA-binding, inner membrane-associated putative hydrolase AYM31_RS12470 PF07670 Nucleoside recognition AYM31_RS12475 PF01032 FecCD transport family AYM31_RS12480 PF01032 FecCD transport family AYM31_RS12485 PF01497 Periplasmic binding protein AYM31_RS12495 PF01168 Alanine racemase, N-terminal domain AYM31_RS12500 PF04183 IucA / IucC family AYM31_RS12500 PF06276 Ferric iron reductase FhuF-like transporter AYM31_RS12505 PF05977 Transmembrane secretion effector AYM31_RS12520 PF03780 Asp23 family, cell envelope-related function AYM31_RS12535 PF02028 BCCT, betaine/carnitine/choline family transporter AYM31_RS12540 PF08240 Alcohol dehydrogenase GroES-like domain AYM31_RS12540 PF00107 Zinc-binding dehydrogenase AYM31_RS12545 PF16884 N-terminal domain of oxidoreductase AYM31_RS12545 PF00107 Zinc-binding dehydrogenase AYM31_RS12555 PF00232 Glycosyl hydrolase family 1 AYM31_RS12560 PF02378 Phosphotransferase system, EIIC AYM31_RS12560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYM31_RS12565 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AYM31_RS12570 PF01791 DeoC/LacD family aldolase AYM31_RS12575 PF00294 pfkB family carbohydrate kinase AYM31_RS12585 PF08220 DeoR-like helix-turn-helix domain AYM31_RS12585 PF00455 DeoR C terminal sensor domain AYM31_RS12590 PF02146 Sir2 family AYM31_RS12610 PF00248 Aldo/keto reductase family AYM31_RS12615 PF13411 MerR HTH family regulatory protein AYM31_RS12625 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain AYM31_RS12625 PF02278 Polysaccharide lyase family 8, super-sandwich domain AYM31_RS12625 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain AYM31_RS12635 PF05116 Sucrose-6F-phosphate phosphohydrolase AYM31_RS12645 PF03306 Alpha-acetolactate decarboxylase AYM31_RS12650 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYM31_RS12650 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYM31_RS12650 PF00205 Thiamine pyrophosphate enzyme, central domain AYM31_RS12670 PF10431 C-terminal, D2-small domain, of ClpB protein AYM31_RS12670 PF02861 Clp amino terminal domain, pathogenicity island component AYM31_RS12670 PF17871 AAA lid domain AYM31_RS12670 PF07724 AAA domain (Cdc48 subfamily) AYM31_RS12670 PF00004 ATPase family associated with various cellular activities (AAA) AYM31_RS12690 PF00380 Ribosomal protein S9/S16 AYM31_RS12695 PF00572 Ribosomal protein L13 AYM31_RS12700 PF01416 tRNA pseudouridine synthase AYM31_RS12705 PF02361 Cobalt transport protein AYM31_RS12710 PF00005 ABC transporter AYM31_RS12715 PF00005 ABC transporter AYM31_RS12720 PF01196 Ribosomal protein L17 AYM31_RS12725 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AYM31_RS12725 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AYM31_RS12725 PF01000 RNA polymerase Rpb3/RpoA insert domain AYM31_RS12730 PF00411 Ribosomal protein S11 AYM31_RS12735 PF00416 Ribosomal protein S13/S18 AYM31_RS12740 PF00444 Ribosomal protein L36 AYM31_RS12745 PF01176 Translation initiation factor 1A / IF-1 AYM31_RS12750 PF05191 Adenylate kinase, active site lid AYM31_RS12755 PF00344 SecY translocase AYM31_RS12760 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AYM31_RS12765 PF00327 Ribosomal protein L30p/L7e AYM31_RS12770 PF00333 Ribosomal protein S5, N-terminal domain AYM31_RS12770 PF03719 Ribosomal protein S5, C-terminal domain AYM31_RS12775 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AYM31_RS12780 PF00347 Ribosomal protein L6 AYM31_RS12785 PF00410 Ribosomal protein S8 AYM31_RS12790 PF00253 Ribosomal protein S14p/S29e AYM31_RS12795 PF00673 ribosomal L5P family C-terminus AYM31_RS12795 PF00281 Ribosomal protein L5 AYM31_RS12800 PF00467 KOW motif AYM31_RS12800 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AYM31_RS12805 PF00238 Ribosomal protein L14p/L23e AYM31_RS12810 PF00366 Ribosomal protein S17 AYM31_RS12815 PF00831 Ribosomal L29 protein AYM31_RS12820 PF00252 Ribosomal protein L16p/L10e AYM31_RS12825 PF07650 KH domain AYM31_RS12825 PF00189 Ribosomal protein S3, C-terminal domain AYM31_RS12830 PF00237 Ribosomal protein L22p/L17e AYM31_RS12835 PF00203 Ribosomal protein S19 AYM31_RS12840 PF00181 Ribosomal Proteins L2, RNA binding domain AYM31_RS12840 PF03947 Ribosomal Proteins L2, C-terminal domain AYM31_RS12845 PF00276 Ribosomal protein L23 AYM31_RS12850 PF00573 Ribosomal protein L4/L1 family AYM31_RS12855 PF00297 Ribosomal protein L3 AYM31_RS12860 PF00338 Ribosomal protein S10p/S20e AYM31_RS12870 PF00860 Permease family AYM31_RS12875 PF01131 DNA topoisomerase AYM31_RS12875 PF01751 Toprim domain AYM31_RS12890 PF06800 Sugar transport protein AYM31_RS12915 PF00873 AcrB/AcrD/AcrF family AYM31_RS12920 PF02388 FemAB family AYM31_RS12935 PF01047 MarR family AYM31_RS12945 PF01047 MarR family AYM31_RS12965 PF06463 Molybdenum Cofactor Synthesis C AYM31_RS12965 PF04055 Radical SAM superfamily AYM31_RS12970 PF12804 MobA-like NTP transferase domain AYM31_RS12975 PF02597 ThiS family AYM31_RS12980 PF02391 MoaE protein AYM31_RS12985 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AYM31_RS12990 PF00994 Probable molybdopterin binding domain AYM31_RS12990 PF03454 MoeA C-terminal region (domain IV) AYM31_RS12990 PF03453 MoeA N-terminal region (domain I and II) AYM31_RS12995 PF01967 MoaC family AYM31_RS13000 PF00994 Probable molybdopterin binding domain AYM31_RS13005 PF00899 ThiF family AYM31_RS13010 PF00005 ABC transporter AYM31_RS13010 PF03459 TOBE domain AYM31_RS13015 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS13025 PF02634 FdhD/NarQ family AYM31_RS13035 PF02632 BioY family AYM31_RS13040 PF01156 Inosine-uridine preferring nucleoside hydrolase AYM31_RS13050 PF02770 Acyl-CoA dehydrogenase, middle domain AYM31_RS13050 PF08028 Acyl-CoA dehydrogenase, C-terminal domain AYM31_RS13050 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AYM31_RS13055 PF03253 Urea transporter AYM31_RS13060 PF00547 Urease, gamma subunit AYM31_RS13065 PF00699 Urease beta subunit AYM31_RS13070 PF00449 Urease alpha-subunit, N-terminal domain AYM31_RS13070 PF01979 Amidohydrolase family AYM31_RS13075 PF05194 UreE urease accessory protein, C-terminal domain AYM31_RS13075 PF02814 UreE urease accessory protein, N-terminal domain AYM31_RS13080 PF01730 UreF AYM31_RS13085 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYM31_RS13090 PF01774 UreD urease accessory protein AYM31_RS13120 PF05257 CHAP domain AYM31_RS13130 PF03553 Na+/H+ antiporter family AYM31_RS13135 PF02558 Ketopantoate reductase PanE/ApbA AYM31_RS13135 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain AYM31_RS13145 PF05257 CHAP domain AYM31_RS13155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYM31_RS13155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYM31_RS13160 PF01494 FAD binding domain AYM31_RS13165 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AYM31_RS13165 PF13457 GW (Gly-Tryp) dipeptide domain AYM31_RS13180 PF12838 4Fe-4S dicluster domain AYM31_RS13180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AYM31_RS13180 PF00384 Molybdopterin oxidoreductase AYM31_RS13180 PF01568 Molydopterin dinucleotide binding domain AYM31_RS13180 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AYM31_RS13185 PF03816 Cell envelope-related transcriptional attenuator domain AYM31_RS13205 PF02517 CPBP intramembrane metalloprotease AYM31_RS13220 PF00324 Amino acid permease AYM31_RS13240 PF13419 Haloacid dehalogenase-like hydrolase AYM31_RS13245 PF01758 Sodium Bile acid symporter family AYM31_RS13255 PF00367 phosphotransferase system, EIIB AYM31_RS13255 PF02378 Phosphotransferase system, EIIC AYM31_RS13260 PF01380 SIS domain AYM31_RS13260 PF01418 Helix-turn-helix domain, rpiR family AYM31_RS13285 PF01546 Peptidase family M20/M25/M40 AYM31_RS13285 PF07687 Peptidase dimerisation domain AYM31_RS13290 PF01979 Amidohydrolase family AYM31_RS13295 PF01175 Urocanase Rossmann-like domain AYM31_RS13295 PF17391 Urocanase N-terminal domain AYM31_RS13295 PF17392 Urocanase C-terminal domain AYM31_RS13300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYM31_RS13300 PF03466 LysR substrate binding domain AYM31_RS13305 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYM31_RS13310 PF00491 Arginase family AYM31_RS13320 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AYM31_RS13325 PF03473 MOSC domain AYM31_RS13325 PF03475 3-alpha domain AYM31_RS13335 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AYM31_RS13350 PF00005 ABC transporter AYM31_RS13350 PF13732 Domain of unknown function (DUF4162) AYM31_RS13355 PF05656 Protein of unknown function (DUF805) AYM31_RS13360 PF02245 Methylpurine-DNA glycosylase (MPG) AYM31_RS13370 PF03616 Sodium/glutamate symporter AYM31_RS13375 PF01070 FMN-dependent dehydrogenase AYM31_RS13380 PF01544 CorA-like Mg2+ transporter protein AYM31_RS13395 PF07859 alpha/beta hydrolase fold AYM31_RS13395 PF00934 PE family AYM31_RS13405 PF07690 Major Facilitator Superfamily AYM31_RS13420 PF07690 Major Facilitator Superfamily AYM31_RS13440 PF12802 MarR family AYM31_RS13460 PF00005 ABC transporter AYM31_RS13465 PF02687 FtsX-like permease family AYM31_RS13470 PF00486 Transcriptional regulatory protein, C terminal AYM31_RS13470 PF00072 Response regulator receiver domain AYM31_RS13475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS13475 PF00512 His Kinase A (phospho-acceptor) domain AYM31_RS13475 PF00672 HAMP domain AYM31_RS13480 PF04397 LytTr DNA-binding domain AYM31_RS13490 PF06039 Malate:quinone oxidoreductase (Mqo) AYM31_RS13495 PF02652 L-lactate permease AYM31_RS13500 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase AYM31_RS13510 PF13673 Acetyltransferase (GNAT) domain AYM31_RS13515 PF00107 Zinc-binding dehydrogenase AYM31_RS13515 PF08240 Alcohol dehydrogenase GroES-like domain AYM31_RS13520 PF00583 Acetyltransferase (GNAT) family AYM31_RS13525 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS13560 PF00367 phosphotransferase system, EIIB AYM31_RS13560 PF02378 Phosphotransferase system, EIIC AYM31_RS13575 PF16242 Pyridoxamine 5'-phosphate oxidase like AYM31_RS13585 PF00375 Sodium:dicarboxylate symporter family AYM31_RS13595 PF01047 MarR family AYM31_RS13600 PF00011 Hsp20/alpha crystallin family AYM31_RS13605 PF07690 Major Facilitator Superfamily AYM31_RS13620 PF07739 TipAS antibiotic-recognition domain AYM31_RS13620 PF13411 MerR HTH family regulatory protein AYM31_RS13625 PF00196 Bacterial regulatory proteins, luxR family AYM31_RS13625 PF00072 Response regulator receiver domain AYM31_RS13630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS13630 PF07730 Histidine kinase AYM31_RS13640 PF02665 Nitrate reductase gamma subunit AYM31_RS13650 PF14711 Respiratory nitrate reductase beta C-terminal AYM31_RS13650 PF13247 4Fe-4S dicluster domain AYM31_RS13655 PF14710 Respiratory nitrate reductase alpha N-terminal AYM31_RS13655 PF01568 Molydopterin dinucleotide binding domain AYM31_RS13655 PF00384 Molybdopterin oxidoreductase AYM31_RS13660 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AYM31_RS13665 PF00355 Rieske [2Fe-2S] domain AYM31_RS13670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AYM31_RS13670 PF18267 Rubredoxin NAD+ reductase C-terminal domain AYM31_RS13670 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AYM31_RS13670 PF04324 BFD-like [2Fe-2S] binding domain AYM31_RS13670 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AYM31_RS13680 PF00583 Acetyltransferase (GNAT) family AYM31_RS13685 PF01226 Formate/nitrite transporter AYM31_RS13700 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AYM31_RS13700 PF01297 Zinc-uptake complex component A periplasmic AYM31_RS13705 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AYM31_RS13735 PF00005 ABC transporter AYM31_RS13740 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS13745 PF00497 Bacterial extracellular solute-binding proteins, family 3 AYM31_RS13750 PF07690 Major Facilitator Superfamily AYM31_RS13765 PF00300 Histidine phosphatase superfamily (branch 1) AYM31_RS13770 PF01545 Cation efflux family AYM31_RS13770 PF16916 Dimerisation domain of Zinc Transporter AYM31_RS13780 PF02216 B domain AYM31_RS13780 PF11621 C3 binding domain 4 of IgG-bind protein SBI AYM31_RS13795 PF07968 Leukocidin/Hemolysin toxin family AYM31_RS13800 PF07968 Leukocidin/Hemolysin toxin family AYM31_RS13805 PF07968 Leukocidin/Hemolysin toxin family AYM31_RS13815 PF03744 6-carboxyhexanoate--CoA ligase AYM31_RS13820 PF00155 Aminotransferase class I and II AYM31_RS13825 PF04055 Radical SAM superfamily AYM31_RS13825 PF06968 Biotin and Thiamin Synthesis associated domain AYM31_RS13830 PF00202 Aminotransferase class-III AYM31_RS13850 PF00005 ABC transporter AYM31_RS13850 PF00664 ABC transporter transmembrane region AYM31_RS13855 PF04954 Siderophore-interacting protein AYM31_RS13855 PF08021 Siderophore-interacting FAD-binding domain AYM31_RS13855 PF00005 ABC transporter AYM31_RS13855 PF00664 ABC transporter transmembrane region AYM31_RS13880 PF02595 Glycerate kinase family AYM31_RS13890 PF07690 Major Facilitator Superfamily AYM31_RS13910 PF00324 Amino acid permease AYM31_RS13915 PF00999 Sodium/hydrogen exchanger family AYM31_RS13925 PF13520 Amino acid permease AYM31_RS13935 PF00144 Beta-lactamase AYM31_RS13950 PF02558 Ketopantoate reductase PanE/ApbA AYM31_RS13950 PF08546 Ketopantoate reductase PanE/ApbA C terminal AYM31_RS13955 PF07690 Major Facilitator Superfamily AYM31_RS13960 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS13965 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AYM31_RS13970 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS13975 PF00571 CBS domain AYM31_RS13975 PF00005 ABC transporter AYM31_RS13990 PF08818 Domain of unknown function (DU1801) AYM31_RS14000 PF13520 Amino acid permease AYM31_RS14010 PF00135 Carboxylesterase family AYM31_RS14015 PF07690 Major Facilitator Superfamily AYM31_RS14020 PF03649 Uncharacterised protein family (UPF0014) AYM31_RS14025 PF00005 ABC transporter AYM31_RS14030 PF05343 M42 glutamyl aminopeptidase AYM31_RS14035 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system AYM31_RS14050 PF06998 Protein of unknown function (DUF1307) AYM31_RS14055 PF01645 Conserved region in glutamate synthase AYM31_RS14065 PF07690 Major Facilitator Superfamily AYM31_RS14070 PF00005 ABC transporter AYM31_RS14075 PF00005 ABC transporter AYM31_RS14080 PF12911 N-terminal TM domain of oligopeptide transport permease C AYM31_RS14080 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS14085 PF00528 Binding-protein-dependent transport system inner membrane component AYM31_RS14090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AYM31_RS14095 PF10100 Staphylopine dehydrogenase AYM31_RS14125 PF03806 AbgT putative transporter family AYM31_RS14130 PF02627 Carboxymuconolactone decarboxylase family AYM31_RS14155 PF00106 short chain dehydrogenase AYM31_RS14180 PF04507 Csa1 family AYM31_RS14205 PF04507 Csa1 family AYM31_RS14215 PF00293 NUDIX domain AYM31_RS14220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AYM31_RS14220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AYM31_RS14220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AYM31_RS14220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AYM31_RS14255 PF13463 Winged helix DNA-binding domain AYM31_RS14265 PF00483 Nucleotidyl transferase AYM31_RS14270 PF17961 Bacterial Ig domain AYM31_RS14270 PF02986 Fibronectin binding repeat AYM31_RS14270 PF00746 LPXTG cell wall anchor motif AYM31_RS14270 PF04650 YSIRK type signal peptide AYM31_RS14270 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AYM31_RS14275 PF02986 Fibronectin binding repeat AYM31_RS14275 PF00746 LPXTG cell wall anchor motif AYM31_RS14275 PF04650 YSIRK type signal peptide AYM31_RS14275 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AYM31_RS14275 PF17961 Bacterial Ig domain AYM31_RS14290 PF02447 GntP family permease AYM31_RS14295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AYM31_RS14295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AYM31_RS14300 PF07729 FCD domain AYM31_RS14300 PF00392 Bacterial regulatory proteins, gntR family AYM31_RS14305 PF13411 MerR HTH family regulatory protein AYM31_RS14310 PF04607 Region found in RelA / SpoT proteins AYM31_RS14315 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) AYM31_RS14325 PF07690 Major Facilitator Superfamily AYM31_RS14330 PF09335 SNARE associated Golgi protein AYM31_RS14340 PF07690 Major Facilitator Superfamily AYM31_RS14345 PF01047 MarR family AYM31_RS14355 PF00005 ABC transporter AYM31_RS14365 PF06874 Firmicute fructose-1,6-bisphosphatase AYM31_RS14375 PF01738 Dienelactone hydrolase family AYM31_RS14380 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYM31_RS14385 PF01047 MarR family AYM31_RS14395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AYM31_RS14400 PF00881 Nitroreductase family AYM31_RS14405 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYM31_RS14405 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYM31_RS14415 PF00005 ABC transporter AYM31_RS14425 PF04203 Sortase domain AYM31_RS14445 PF03313 Serine dehydratase alpha chain AYM31_RS14450 PF01842 ACT domain AYM31_RS14450 PF03315 Serine dehydratase beta chain AYM31_RS14465 PF00892 EamA-like transporter family AYM31_RS14470 PF07859 alpha/beta hydrolase fold AYM31_RS14470 PF00934 PE family AYM31_RS14485 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AYM31_RS14485 PF02378 Phosphotransferase system, EIIC AYM31_RS14485 PF00367 phosphotransferase system, EIIB AYM31_RS14490 PF00205 Thiamine pyrophosphate enzyme, central domain AYM31_RS14490 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AYM31_RS14490 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AYM31_RS14495 PF04172 LrgB-like family AYM31_RS14500 PF03788 LrgA family AYM31_RS14505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AYM31_RS14505 PF03466 LysR substrate binding domain AYM31_RS14515 PF05257 CHAP domain AYM31_RS14535 PF00368 Hydroxymethylglutaryl-coenzyme A reductase AYM31_RS14540 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal AYM31_RS14540 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal AYM31_RS14545 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AYM31_RS14545 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AYM31_RS14550 PF00004 ATPase family associated with various cellular activities (AAA) AYM31_RS14550 PF07724 AAA domain (Cdc48 subfamily) AYM31_RS14550 PF17871 AAA lid domain AYM31_RS14550 PF10431 C-terminal, D2-small domain, of ClpB protein AYM31_RS14560 PF17910 FeoB cytosolic helical domain AYM31_RS14560 PF07664 Ferrous iron transport protein B C terminus AYM31_RS14560 PF02421 Ferrous iron transport protein B AYM31_RS14560 PF07670 Nucleoside recognition AYM31_RS14570 PF03176 MMPL family AYM31_RS14585 PF00171 Aldehyde dehydrogenase family AYM31_RS14590 PF14602 Hexapeptide repeat of succinyl-transferase AYM31_RS14590 PF00132 Bacterial transferase hexapeptide (six repeats) AYM31_RS14590 PF12464 Maltose acetyltransferase AYM31_RS14600 PF00403 Heavy-metal-associated domain AYM31_RS14605 PF00403 Heavy-metal-associated domain AYM31_RS14610 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AYM31_RS14610 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AYM31_RS14615 PF00155 Aminotransferase class I and II AYM31_RS14620 PF01593 Flavin containing amine oxidoreductase AYM31_RS14630 PF00535 Glycosyl transferase family 2 AYM31_RS14635 PF01593 Flavin containing amine oxidoreductase AYM31_RS14650 PF01757 Acyltransferase family AYM31_RS14660 PF01464 Transglycosylase SLT domain AYM31_RS14685 PF05979 Bacterial protein of unknown function (DUF896) AYM31_RS14705 PF00440 Bacterial regulatory proteins, tetR family AYM31_RS14710 PF00106 short chain dehydrogenase AYM31_RS14720 PF00561 alpha/beta hydrolase fold AYM31_RS14725 PF07683 Cobalamin synthesis protein cobW C-terminal domain AYM31_RS14725 PF02492 CobW/HypB/UreG, nucleotide-binding domain AYM31_RS14760 PF03881 Fructosamine kinase AYM31_RS14765 PF01180 Dihydroorotate dehydrogenase AYM31_RS14775 PF02677 Epoxyqueuosine reductase QueH AYM31_RS14800 PF02261 Aspartate decarboxylase AYM31_RS14805 PF02569 Pantoate-beta-alanine ligase AYM31_RS14810 PF02548 Ketopantoate hydroxymethyltransferase AYM31_RS14815 PF02558 Ketopantoate reductase PanE/ApbA AYM31_RS14815 PF08546 Ketopantoate reductase PanE/ApbA C terminal AYM31_RS14820 PF03306 Alpha-acetolactate decarboxylase AYM31_RS14825 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AYM31_RS14825 PF00056 lactate/malate dehydrogenase, NAD binding domain AYM31_RS14835 PF13520 Amino acid permease AYM31_RS14840 PF00202 Aminotransferase class-III AYM31_RS14850 PF00274 Fructose-bisphosphate aldolase class-I AYM31_RS14855 PF06039 Malate:quinone oxidoreductase (Mqo) AYM31_RS14865 PF13193 AMP-binding enzyme C-terminal domain AYM31_RS14865 PF00501 AMP-binding enzyme AYM31_RS14880 PF00732 GMC oxidoreductase AYM31_RS14880 PF05199 GMC oxidoreductase AYM31_RS14885 PF00171 Aldehyde dehydrogenase family AYM31_RS14905 PF02028 BCCT, betaine/carnitine/choline family transporter AYM31_RS14925 PF03477 ATP cone domain AYM31_RS14925 PF13597 Anaerobic ribonucleoside-triphosphate reductase AYM31_RS14930 PF03600 Citrate transporter AYM31_RS14940 PF14824 Sirohaem biosynthesis protein central AYM31_RS14945 PF00175 Oxidoreductase NAD-binding domain AYM31_RS14945 PF00258 Flavodoxin AYM31_RS14945 PF00667 FAD binding domain AYM31_RS14955 PF00255 Glutathione peroxidase AYM31_RS14980 PF00005 ABC transporter AYM31_RS14985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AYM31_RS14990 PF00072 Response regulator receiver domain AYM31_RS14990 PF00486 Transcriptional regulatory protein, C terminal AYM31_RS15000 PF00245 Alkaline phosphatase AYM31_RS15010 PF01047 MarR family AYM31_RS15020 PF17961 Bacterial Ig domain AYM31_RS15020 PF00746 LPXTG cell wall anchor motif AYM31_RS15020 PF10425 C-terminus of bacterial fibrinogen-binding adhesin AYM31_RS15020 PF04650 YSIRK type signal peptide AYM31_RS15025 PF13545 Crp-like helix-turn-helix domain AYM31_RS15025 PF00027 Cyclic nucleotide-binding domain AYM31_RS15030 PF00696 Amino acid kinase family AYM31_RS15035 PF13520 Amino acid permease AYM31_RS15040 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AYM31_RS15040 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AYM31_RS15055 PF01316 Arginine repressor, DNA binding domain AYM31_RS15055 PF02863 Arginine repressor, C-terminal domain AYM31_RS15060 PF07504 Fungalysin/Thermolysin Propeptide Motif AYM31_RS15060 PF03413 Peptidase propeptide and YPEB domain AYM31_RS15060 PF01447 Thermolysin metallopeptidase, catalytic domain AYM31_RS15060 PF02868 Thermolysin metallopeptidase, alpha-helical domain AYM31_RS15075 PF05043 Mga helix-turn-helix domain AYM31_RS15075 PF08279 HTH domain AYM31_RS15075 PF00874 PRD domain AYM31_RS15075 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYM31_RS15080 PF02378 Phosphotransferase system, EIIC AYM31_RS15080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AYM31_RS15080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AYM31_RS15085 PF01238 Phosphomannose isomerase type I AYM31_RS15090 PF01061 ABC-2 type transporter AYM31_RS15095 PF05257 CHAP domain AYM31_RS15095 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AYM31_RS15100 PF00857 Isochorismatase family AYM31_RS15100 PF00550 Phosphopantetheine attachment site AYM31_RS15105 PF01468 GA module AYM31_RS15115 PF00534 Glycosyl transferases group 1 AYM31_RS15120 PF07516 SecA Wing and Scaffold domain AYM31_RS15120 PF01043 SecA preprotein cross-linking domain AYM31_RS15120 PF07517 SecA DEAD-like domain AYM31_RS15125 PF15432 Accessory Sec secretory system ASP3 AYM31_RS15130 PF16929 Accessory Sec system GspB-transporter AYM31_RS15135 PF16993 Accessory Sec system protein Asp1 AYM31_RS15140 PF00344 SecY translocase AYM31_RS15145 PF00746 LPXTG cell wall anchor motif AYM31_RS15150 PF01613 Flavin reductase like domain AYM31_RS15170 PF01613 Flavin reductase like domain AYM31_RS15175 PF01625 Peptide methionine sulfoxide reductase AYM31_RS15175 PF01641 SelR domain AYM31_RS15190 PF13614 AAA domain AYM31_RS15195 PF02706 Chain length determinant protein AYM31_RS15200 PF00440 Bacterial regulatory proteins, tetR family AYM31_RS15200 PF18665 Tetracyclin repressor-like, C-terminal domain AYM31_RS15205 PF00535 Glycosyl transferase family 2 AYM31_RS15215 PF01522 Polysaccharide deacetylase AYM31_RS15220 PF01757 Acyltransferase family AYM31_RS15235 PF04650 YSIRK type signal peptide AYM31_RS15245 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AYM31_RS15245 PF01502 Phosphoribosyl-AMP cyclohydrolase AYM31_RS15250 PF00977 Histidine biosynthesis protein AYM31_RS15255 PF00977 Histidine biosynthesis protein AYM31_RS15260 PF00117 Glutamine amidotransferase class-I AYM31_RS15265 PF00475 Imidazoleglycerol-phosphate dehydratase AYM31_RS15270 PF00155 Aminotransferase class I and II AYM31_RS15275 PF00815 Histidinol dehydrogenase AYM31_RS15280 PF01634 ATP phosphoribosyltransferase AYM31_RS15285 PF13393 Histidyl-tRNA synthetase AYM31_RS15305 PF12558 ATP-binding cassette cobalt transporter AYM31_RS15305 PF00005 ABC transporter AYM31_RS15310 PF07155 ECF-type riboflavin transporter, S component AYM31_RS15320 PF04264 YceI-like domain AYM31_RS15325 PF08450 SMP-30/Gluconolactonase/LRE-like region AYM31_RS15330 PF17773 UPF0176 acylphosphatase like domain AYM31_RS15330 PF00581 Rhodanese-like domain AYM31_RS15330 PF12368 Rhodanase C-terminal AYM31_RS15335 PF01470 Pyroglutamyl peptidase AYM31_RS15355 PF00939 Sodium:sulfate symporter transmembrane region AYM31_RS15360 PF00892 EamA-like transporter family AYM31_RS15370 PF03824 High-affinity nickel-transport protein AYM31_RS15375 PF00797 N-acetyltransferase AYM31_RS15385 PF00005 ABC transporter AYM31_RS15390 PF02687 FtsX-like permease family AYM31_RS15420 PF00313 'Cold-shock' DNA-binding domain AYM31_RS15445 PF02195 ParB-like nuclease domain AYM31_RS15445 PF17762 HTH domain found in ParB protein AYM31_RS15450 PF02527 rRNA small subunit methyltransferase G AYM31_RS15455 PF13932 GidA associated domain AYM31_RS15455 PF01134 Glucose inhibited division protein A AYM31_RS15460 PF10396 GTP-binding protein TrmE N-terminus AYM31_RS15460 PF12631 MnmE helical domain AYM31_RS15460 PF01926 50S ribosome-binding GTPase AYM31_RS15465 PF00825 Ribonuclease P AYM31_RS15470 PF00468 Ribosomal protein L34 AYM31_RS15485 PF00308 Bacterial dnaA protein AYM31_RS15485 PF08299 Bacterial dnaA protein helix-turn-helix AYM31_RS15485 PF11638 DnaA N-terminal domain AYM31_RS15545 PF00521 DNA gyrase/topoisomerase IV, subunit A AYM31_RS15545 PF03989 DNA gyrase C-terminal domain, beta-propeller AYM31_RS15650 PF00512 His Kinase A (phospho-acceptor) domain AYM31_RS15650 PF13426 PAS domain AYM31_RS15650 PF00672 HAMP domain AYM31_RS15650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase