AYM34_RS00005 SM00382 ATPases associated with a variety of cellular activities AYM34_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AYM34_RS00010 SM00480 DNA polymerase III beta subunit AYM34_RS00025 SM00387 Histidine kinase-like ATPases AYM34_RS00025 SM00433 TopoisomeraseII AYM34_RS00030 SM00434 DNA Topoisomerase IV AYM34_RS00075 SM00267 diguanylate cyclase AYM34_RS00095 SM00788 Adenylosuccinate synthetase AYM34_RS00110 SM00448 cheY-homologous receiver domain AYM34_RS00110 SM00862 Transcriptional regulatory protein, C terminal AYM34_RS00115 SM00091 PAS domain AYM34_RS00115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYM34_RS00115 SM00387 Histidine kinase-like ATPases AYM34_RS00115 SM00388 His Kinase A (phosphoacceptor) domain AYM34_RS00130 SM00849 Metallo-beta-lactamase superfamily AYM34_RS00210 SM00857 Resolvase, N terminal domain AYM34_RS00215 SM00857 Resolvase, N terminal domain AYM34_RS00295 SM00829 Enoylreductase AYM34_RS00405 SM00382 ATPases associated with a variety of cellular activities AYM34_RS00410 SM00382 ATPases associated with a variety of cellular activities AYM34_RS00460 SM00450 Rhodanese Homology Domain AYM34_RS00465 SM00450 Rhodanese Homology Domain AYM34_RS00465 SM00849 Metallo-beta-lactamase superfamily AYM34_RS00545 SM00148 Phospholipase C, catalytic domain (part); domain X AYM34_RS00570 SM00342 helix_turn_helix, arabinose operon control protein AYM34_RS00600 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM34_RS00615 SM00257 Lysin motif AYM34_RS00625 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS00685 SM00470 ParB-like nuclease domain AYM34_RS00705 SM00822 AYM34_RS00705 AYM34_RS00750 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM34_RS00765 SM01133 AYM34_RS00765 AYM34_RS00785 SM00382 ATPases associated with a variety of cellular activities AYM34_RS00790 SM00062 Bacterial periplasmic substrate-binding proteins AYM34_RS00920 SM00984 UDP binding domain AYM34_RS00960 SM00382 ATPases associated with a variety of cellular activities AYM34_RS01020 SM00859 Semialdehyde dehydrogenase, NAD binding domain AYM34_RS01080 SM00487 DEAD-like helicases superfamily AYM34_RS01100 SM00382 ATPases associated with a variety of cellular activities AYM34_RS01140 SM00382 ATPases associated with a variety of cellular activities AYM34_RS01185 SM00342 helix_turn_helix, arabinose operon control protein AYM34_RS01185 SM00448 cheY-homologous receiver domain AYM34_RS01255 SM00882 Coenzyme A transferase AYM34_RS01335 SM00829 Enoylreductase AYM34_RS01345 SM00829 Enoylreductase AYM34_RS01395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AYM34_RS01395 SM00387 Histidine kinase-like ATPases AYM34_RS01400 SM00448 cheY-homologous receiver domain AYM34_RS01400 SM00850 LytTr DNA-binding domain AYM34_RS01415 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM34_RS01415 SM00866 AYM34_RS01415 AYM34_RS01465 SM00354 helix_turn _helix lactose operon repressor AYM34_RS01500 SM00382 ATPases associated with a variety of cellular activities AYM34_RS01700 SM00382 ATPases associated with a variety of cellular activities AYM34_RS01735 SM01130 AYM34_RS01735 AYM34_RS01790 SM00506 Appr-1"-p processing enzyme AYM34_RS01835 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS01915 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS01925 SM00382 ATPases associated with a variety of cellular activities AYM34_RS01975 SM00470 ParB-like nuclease domain AYM34_RS02065 SM00855 Phosphoglycerate mutase family AYM34_RS02140 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM34_RS02140 SM01240 AYM34_RS02140 AYM34_RS02350 SM00833 Cobalamin synthesis protein cobW C-terminal domain AYM34_RS02385 SM00014 Acid phosphatase homologues AYM34_RS02415 SM00382 ATPases associated with a variety of cellular activities AYM34_RS02415 SM00930 AYM34_RS02415 AYM34_RS02430 SM00257 Lysin motif AYM34_RS02485 SM00642 Alpha-amylase domain AYM34_RS02490 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM34_RS02490 SM00866 AYM34_RS02490 AYM34_RS02510 SM00382 ATPases associated with a variety of cellular activities AYM34_RS02520 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM34_RS02520 SM00493 AYM34_RS02520 AYM34_RS02585 SM00465 GIY-YIG type nucleases (URI domain) AYM34_RS02605 SM00493 AYM34_RS02605 AYM34_RS02610 SM00650 Ribosomal RNA adenine dimethylases AYM34_RS02650 SM01400 AYM34_RS02650 AYM34_RS02670 SM00487 DEAD-like helicases superfamily AYM34_RS02670 SM00490 helicase superfamily c-terminal domain AYM34_RS02670 SM00982 AYM34_RS02670 AYM34_RS02670 SM01058 CarD-like/TRCF domain AYM34_RS02685 SM00363 S4 RNA-binding domain AYM34_RS02695 SM00316 Ribosomal protein S1-like RNA-binding domain AYM34_RS02700 SM00977 TilS substrate C-terminal domain AYM34_RS02710 SM00382 ATPases associated with a variety of cellular activities AYM34_RS02730 SM00905 Dihydroneopterin aldolase AYM34_RS02815 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM34_RS02850 SM00382 ATPases associated with a variety of cellular activities AYM34_RS02850 SM01086 C-terminal, D2-small domain, of ClpB protein AYM34_RS02855 SM00382 ATPases associated with a variety of cellular activities AYM34_RS02860 SM00670 Large family of predicted nucleotide-binding domains AYM34_RS02880 SM00840 AYM34_RS02880 AYM34_RS02885 SM00535 Ribonuclease III family AYM34_RS02890 SM00967 RNA 2'-O ribose methyltransferase substrate binding AYM34_RS02915 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AYM34_RS02915 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AYM34_RS02920 SM00649 Ribosomal protein L11/L12 AYM34_RS02950 SM00663 RNA polymerase I subunit A N-terminus AYM34_RS02970 SM00838 Elongation factor G C-terminus AYM34_RS02970 SM00889 Elongation factor G, domain IV AYM34_RS03095 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AYM34_RS03150 SM00986 Uracil DNA glycosylase superfamily AYM34_RS03150 SM00987 UreE urease accessory protein, C-terminal domain AYM34_RS03330 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM34_RS03340 SM00829 Enoylreductase AYM34_RS03355 SM00836 DALR anticodon binding domain AYM34_RS03355 SM01016 Arginyl tRNA synthetase N terminal dom AYM34_RS03370 SM00478 endonuclease III AYM34_RS03565 SM00382 ATPases associated with a variety of cellular activities AYM34_RS03570 SM00529 Helix-turn-helix diphteria tox regulatory element AYM34_RS03570 SM00899 AYM34_RS03570 AYM34_RS03585 SM00382 ATPases associated with a variety of cellular activities AYM34_RS03615 SM00382 ATPases associated with a variety of cellular activities AYM34_RS03635 SM00382 ATPases associated with a variety of cellular activities AYM34_RS03655 SM01120 AYM34_RS03655 AYM34_RS03700 SM00448 cheY-homologous receiver domain AYM34_RS03700 SM00862 Transcriptional regulatory protein, C terminal AYM34_RS03705 SM00387 Histidine kinase-like ATPases AYM34_RS03710 SM00382 ATPases associated with a variety of cellular activities AYM34_RS03730 SM00257 Lysin motif AYM34_RS03830 SM00382 ATPases associated with a variety of cellular activities AYM34_RS03835 SM00382 ATPases associated with a variety of cellular activities AYM34_RS03840 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS03845 SM00833 Cobalamin synthesis protein cobW C-terminal domain AYM34_RS03900 SM00420 helix_turn_helix, Deoxyribose operon repressor AYM34_RS03900 SM01134 AYM34_RS03900 AYM34_RS03920 SM01091 Transporter associated domain AYM34_RS03935 SM00387 Histidine kinase-like ATPases AYM34_RS03935 SM00388 His Kinase A (phosphoacceptor) domain AYM34_RS03940 SM00448 cheY-homologous receiver domain AYM34_RS03940 SM00862 Transcriptional regulatory protein, C terminal AYM34_RS03995 SM00796 Allophanate hydrolase subunit 1 AYM34_RS04000 SM00797 Allophanate hydrolase subunit 2 AYM34_RS04010 SM00382 ATPases associated with a variety of cellular activities AYM34_RS04015 SM00341 Helicase and RNase D C-terminal AYM34_RS04015 SM00487 DEAD-like helicases superfamily AYM34_RS04015 SM00490 helicase superfamily c-terminal domain AYM34_RS04015 SM00956 AYM34_RS04015 AYM34_RS04020 SM00382 ATPases associated with a variety of cellular activities AYM34_RS04050 SM00046 Diacylglycerol kinase catalytic domain (presumed) AYM34_RS04115 SM00382 ATPases associated with a variety of cellular activities AYM34_RS04175 SM00267 diguanylate cyclase AYM34_RS04195 SM00487 DEAD-like helicases superfamily AYM34_RS04195 SM00490 helicase superfamily c-terminal domain AYM34_RS04210 SM00957 SecA DEAD-like domain AYM34_RS04210 SM00958 SecA preprotein cross-linking domain AYM34_RS04220 SM00937 AYM34_RS04220 AYM34_RS04230 SM00257 Lysin motif AYM34_RS04245 SM00487 DEAD-like helicases superfamily AYM34_RS04245 SM00490 helicase superfamily c-terminal domain AYM34_RS04275 SM00028 Tetratricopeptide repeats AYM34_RS04345 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYM34_RS04365 SM01192 AYM34_RS04365 AYM34_RS04365 SM01193 AYM34_RS04365 AYM34_RS04385 SM00316 Ribosomal protein S1-like RNA-binding domain AYM34_RS04385 SM00357 Cold shock protein domain AYM34_RS04385 SM00955 AYM34_RS04385 AYM34_RS04455 SM00318 Staphylococcal nuclease homologues AYM34_RS04460 SM00357 Cold shock protein domain AYM34_RS04500 SM00855 Phosphoglycerate mutase family AYM34_RS04560 SM00493 AYM34_RS04560 AYM34_RS04570 SM00382 ATPases associated with a variety of cellular activities AYM34_RS04570 SM00930 AYM34_RS04570 AYM34_RS04605 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS04610 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS04640 SM00885 D5 N terminal like AYM34_RS04700 SM00382 ATPases associated with a variety of cellular activities AYM34_RS04740 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS04755 SM01040 BRO family, N-terminal domain AYM34_RS04800 SM00382 ATPases associated with a variety of cellular activities AYM34_RS05025 SM00047 Lysozyme subfamily 2 AYM34_RS05045 SM00287 Bacterial SH3 domain homologues AYM34_RS05045 SM00644 AYM34_RS05045 AYM34_RS05100 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM34_RS05245 SM01298 AYM34_RS05245 AYM34_RS05255 SM00316 Ribosomal protein S1-like RNA-binding domain AYM34_RS05270 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AYM34_RS05360 SM00382 ATPases associated with a variety of cellular activities AYM34_RS05360 SM01086 C-terminal, D2-small domain, of ClpB protein AYM34_RS05405 SM00825 Beta-ketoacyl synthase AYM34_RS05425 SM00382 ATPases associated with a variety of cellular activities AYM34_RS05430 SM00382 ATPases associated with a variety of cellular activities AYM34_RS05445 SM00382 ATPases associated with a variety of cellular activities AYM34_RS05450 SM00382 ATPases associated with a variety of cellular activities AYM34_RS05505 SM01118 AYM34_RS05505 AYM34_RS05515 SM00954 Region found in RelA / SpoT proteins AYM34_RS05530 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM34_RS05530 SM00924 MgtE intracellular N domain AYM34_RS05595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYM34_RS05625 SM00914 AYM34_RS05625 AYM34_RS05670 SM00382 ATPases associated with a variety of cellular activities AYM34_RS05770 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS05780 SM00047 Lysozyme subfamily 2 AYM34_RS05780 SM00644 AYM34_RS05780 AYM34_RS05845 SM01001 AIR carboxylase AYM34_RS05865 SM01211 AYM34_RS05865 AYM34_RS05890 SM00798 AICARFT/IMPCHase bienzyme AYM34_RS05890 SM00851 MGS-like domain AYM34_RS05895 SM01209 AYM34_RS05895 AYM34_RS05895 SM01210 AYM34_RS05895 AYM34_RS05905 SM00382 ATPases associated with a variety of cellular activities AYM34_RS05980 SM00849 Metallo-beta-lactamase superfamily AYM34_RS06010 SM00861 Transketolase, pyrimidine binding domain AYM34_RS06030 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS06035 SM00382 ATPases associated with a variety of cellular activities AYM34_RS06085 SM00838 Elongation factor G C-terminus AYM34_RS06110 SM00878 Biotin carboxylase C-terminal domain AYM34_RS06190 SM00725 NEAr Transporter domain AYM34_RS06195 SM00725 NEAr Transporter domain AYM34_RS06200 SM00725 NEAr Transporter domain AYM34_RS06235 SM00967 RNA 2'-O ribose methyltransferase substrate binding AYM34_RS06245 SM00873 B3/4 domain AYM34_RS06245 SM00874 tRNA synthetase B5 domain AYM34_RS06245 SM00896 Ferredoxin-fold anticodon binding domain AYM34_RS06270 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM34_RS06270 SM00481 DNA polymerase alpha chain like domain AYM34_RS06270 SM00483 DNA polymerase X family AYM34_RS06275 SM00463 Small MutS-related domain AYM34_RS06275 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AYM34_RS06275 SM00534 ATPase domain of DNA mismatch repair MUTS family AYM34_RS06290 SM00465 GIY-YIG type nucleases (URI domain) AYM34_RS06490 SM00740 AYM34_RS06490 AYM34_RS06510 SM00842 Cell division protein FtsA AYM34_RS06515 SM00864 Tubulin/FtsZ family, GTPase domain AYM34_RS06515 SM00865 Tubulin/FtsZ family, C-terminal domain AYM34_RS06540 SM00363 S4 RNA-binding domain AYM34_RS06570 SM00363 S4 RNA-binding domain AYM34_RS06595 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AYM34_RS06600 SM00851 MGS-like domain AYM34_RS06600 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AYM34_RS06600 SM01209 AYM34_RS06600 AYM34_RS06605 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AYM34_RS06630 SM00072 Guanylate kinase homologues. AYM34_RS06635 SM01409 AYM34_RS06635 AYM34_RS06645 SM00487 DEAD-like helicases superfamily AYM34_RS06645 SM00490 helicase superfamily c-terminal domain AYM34_RS06680 SM00331 Sigma factor PP2C-like phosphatases AYM34_RS06680 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AYM34_RS06685 SM00220 Serine/Threonine protein kinases, catalytic domain AYM34_RS06685 SM00740 AYM34_RS06685 AYM34_RS06700 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AYM34_RS06715 SM01120 AYM34_RS06715 AYM34_RS06715 SM01121 AYM34_RS06715 AYM34_RS06720 SM00487 DEAD-like helicases superfamily AYM34_RS06720 SM00490 helicase superfamily c-terminal domain AYM34_RS06735 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AYM34_RS06740 SM00822 AYM34_RS06740 AYM34_RS06755 SM00358 Double-stranded RNA binding motif AYM34_RS06755 SM00535 Ribonuclease III family AYM34_RS06760 SM00968 SMC proteins Flexible Hinge Domain AYM34_RS06765 SM00382 ATPases associated with a variety of cellular activities AYM34_RS06765 SM00962 SRP54-type protein, GTPase domain AYM34_RS06765 SM00963 SRP54-type protein, helical bundle domain AYM34_RS06775 SM00382 ATPases associated with a variety of cellular activities AYM34_RS06775 SM00962 SRP54-type protein, GTPase domain AYM34_RS06775 SM00963 SRP54-type protein, helical bundle domain AYM34_RS06820 SM00881 CoA binding domain AYM34_RS06825 SM00257 Lysin motif AYM34_RS06840 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AYM34_RS06840 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AYM34_RS06840 SM00493 AYM34_RS06840 AYM34_RS06860 SM00382 ATPases associated with a variety of cellular activities AYM34_RS06860 SM01086 C-terminal, D2-small domain, of ClpB protein AYM34_RS06920 SM00479 AYM34_RS06920 AYM34_RS06920 SM00481 DNA polymerase alpha chain like domain AYM34_RS06935 SM00316 Ribosomal protein S1-like RNA-binding domain AYM34_RS06935 SM00322 K homology RNA-binding domain AYM34_RS06965 SM00904 Riboflavin kinase AYM34_RS06970 SM01387 AYM34_RS06970 AYM34_RS06975 SM00316 Ribosomal protein S1-like RNA-binding domain AYM34_RS06975 SM00322 K homology RNA-binding domain AYM34_RS06985 SM00849 Metallo-beta-lactamase superfamily AYM34_RS06990 SM00382 ATPases associated with a variety of cellular activities AYM34_RS06990 SM00843 AYM34_RS06990 AYM34_RS06995 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM34_RS06995 SM00866 AYM34_RS06995 AYM34_RS07020 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS07030 SM00852 Probable molybdopterin binding domain AYM34_RS07035 SM00382 ATPases associated with a variety of cellular activities AYM34_RS07040 SM00322 K homology RNA-binding domain AYM34_RS07040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM34_RS07070 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM34_RS07085 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AYM34_RS07085 SM00534 ATPase domain of DNA mismatch repair MUTS family AYM34_RS07090 SM00853 MutL C terminal dimerisation domain AYM34_RS07090 SM01340 AYM34_RS07090 AYM34_RS07145 SM00422 helix_turn_helix, mercury resistance AYM34_RS07150 SM01230 AYM34_RS07150 AYM34_RS07260 SM00155 Phospholipase D. Active site motifs. AYM34_RS07265 SM00382 ATPases associated with a variety of cellular activities AYM34_RS07280 SM00421 helix_turn_helix, Lux Regulon AYM34_RS07280 SM00448 cheY-homologous receiver domain AYM34_RS07290 SM00318 Staphylococcal nuclease homologues AYM34_RS07345 SM01060 AYM34_RS07345 AYM34_RS07360 SM01240 AYM34_RS07360 AYM34_RS07390 SM00861 Transketolase, pyrimidine binding domain AYM34_RS07460 SM01207 AYM34_RS07460 AYM34_RS07465 SM00387 Histidine kinase-like ATPases AYM34_RS07465 SM00433 TopoisomeraseII AYM34_RS07470 SM00434 DNA Topoisomerase IV AYM34_RS07485 SM01061 CAT RNA binding domain AYM34_RS07590 SM00382 ATPases associated with a variety of cellular activities AYM34_RS07595 SM00382 ATPases associated with a variety of cellular activities AYM34_RS07630 SM00382 ATPases associated with a variety of cellular activities AYM34_RS07660 SM00382 ATPases associated with a variety of cellular activities AYM34_RS07675 SM00859 Semialdehyde dehydrogenase, NAD binding domain AYM34_RS07680 SM01130 AYM34_RS07680 AYM34_RS07700 SM01005 Alanine racemase, C-terminal domain AYM34_RS07715 SM00357 Cold shock protein domain AYM34_RS07755 SM00327 von Willebrand factor (vWF) type A domain AYM34_RS07780 SM00861 Transketolase, pyrimidine binding domain AYM34_RS07785 SM00387 Histidine kinase-like ATPases AYM34_RS07785 SM00388 His Kinase A (phosphoacceptor) domain AYM34_RS07790 SM00448 cheY-homologous receiver domain AYM34_RS07790 SM00862 Transcriptional regulatory protein, C terminal AYM34_RS07805 SM01321 AYM34_RS07805 AYM34_RS07810 SM00014 Acid phosphatase homologues AYM34_RS07825 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYM34_RS07825 SM00245 tail specific protease AYM34_RS07870 SM00567 E-Z type HEAT repeats AYM34_RS07870 SM00932 Scaffold protein Nfu/NifU N terminal AYM34_RS07875 SM00932 Scaffold protein Nfu/NifU N terminal AYM34_RS07900 SM00844 GA module AYM34_RS07920 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AYM34_RS07920 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AYM34_RS07925 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AYM34_RS07925 SM00475 5'-3' exonuclease AYM34_RS07945 SM00981 AYM34_RS07945 AYM34_RS07990 SM00478 endonuclease III AYM34_RS07990 SM00525 AYM34_RS07990 AYM34_RS08005 SM00479 AYM34_RS08005 AYM34_RS08005 SM00491 AYM34_RS08005 AYM34_RS08040 SM00914 AYM34_RS08040 AYM34_RS08045 SM00028 Tetratricopeptide repeats AYM34_RS08070 SM00562 AYM34_RS08070 AYM34_RS08095 SM00411 bacterial (prokaryotic) histone like domain AYM34_RS08110 SM00316 Ribosomal protein S1-like RNA-binding domain AYM34_RS08135 SM00870 AYM34_RS08135 AYM34_RS08150 SM00257 Lysin motif AYM34_RS08155 SM00487 DEAD-like helicases superfamily AYM34_RS08155 SM00490 helicase superfamily c-terminal domain AYM34_RS08215 SM00287 Bacterial SH3 domain homologues AYM34_RS08215 SM00646 AYM34_RS08215 AYM34_RS08295 SM00635 Bacterial Ig-like domain 2 AYM34_RS08350 SM00507 HNH nucleases AYM34_RS08360 SM00487 DEAD-like helicases superfamily AYM34_RS08365 SM00990 AYM34_RS08365 AYM34_RS08450 SM00482 DNA polymerase A domain AYM34_RS08505 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS08510 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS08560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYM34_RS08560 SM00387 Histidine kinase-like ATPases AYM34_RS08560 SM00388 His Kinase A (phosphoacceptor) domain AYM34_RS08565 SM00448 cheY-homologous receiver domain AYM34_RS08565 SM00862 Transcriptional regulatory protein, C terminal AYM34_RS08570 SM00363 S4 RNA-binding domain AYM34_RS08635 SM00342 helix_turn_helix, arabinose operon control protein AYM34_RS08635 SM00871 Bacterial transcription activator, effector binding domain AYM34_RS08640 SM00642 Alpha-amylase domain AYM34_RS08645 SM00354 helix_turn _helix lactose operon repressor AYM34_RS08660 SM01350 AYM34_RS08660 AYM34_RS08690 SM00861 Transketolase, pyrimidine binding domain AYM34_RS08740 SM00878 Biotin carboxylase C-terminal domain AYM34_RS08750 SM00841 Elongation factor P, C-terminal AYM34_RS08750 SM01185 AYM34_RS08750 AYM34_RS08775 SM00450 Rhodanese Homology Domain AYM34_RS08835 SM00849 Metallo-beta-lactamase superfamily AYM34_RS08890 SM00382 ATPases associated with a variety of cellular activities AYM34_RS08895 SM00518 AP endonuclease family 2 AYM34_RS08900 SM00487 DEAD-like helicases superfamily AYM34_RS08900 SM00490 helicase superfamily c-terminal domain AYM34_RS08920 SM00400 zinc finger AYM34_RS08920 SM00493 AYM34_RS08920 AYM34_RS08930 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM34_RS08990 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM34_RS09005 SM00271 DnaJ molecular chaperone homology domain AYM34_RS09025 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM34_RS09035 SM00838 Elongation factor G C-terminus AYM34_RS09050 SM00849 Metallo-beta-lactamase superfamily AYM34_RS09060 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM34_RS09075 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM34_RS09085 SM01103 AYM34_RS09085 AYM34_RS09135 SM00878 Biotin carboxylase C-terminal domain AYM34_RS09145 SM00797 Allophanate hydrolase subunit 2 AYM34_RS09150 SM00796 Allophanate hydrolase subunit 1 AYM34_RS09185 SM00732 Likely ribonuclease with RNase H fold. AYM34_RS09195 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AYM34_RS09200 SM00382 ATPases associated with a variety of cellular activities AYM34_RS09205 SM00028 Tetratricopeptide repeats AYM34_RS09245 SM00382 ATPases associated with a variety of cellular activities AYM34_RS09275 SM00287 Bacterial SH3 domain homologues AYM34_RS09275 SM00646 AYM34_RS09275 AYM34_RS09285 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM34_RS09285 SM00954 Region found in RelA / SpoT proteins AYM34_RS09305 SM01323 AYM34_RS09305 AYM34_RS09320 SM00382 ATPases associated with a variety of cellular activities AYM34_RS09325 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM34_RS09430 SM01004 Delta-aminolevulinic acid dehydratase AYM34_RS09460 SM00382 ATPases associated with a variety of cellular activities AYM34_RS09460 SM00994 ClpX C4-type zinc finger AYM34_RS09460 SM01086 C-terminal, D2-small domain, of ClpB protein AYM34_RS09510 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AYM34_RS09535 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AYM34_RS09545 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AYM34_RS09545 SM01232 AYM34_RS09545 AYM34_RS09550 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AYM34_RS09550 SM00474 3'-5' exonuclease AYM34_RS09550 SM00475 5'-3' exonuclease AYM34_RS09550 SM00482 DNA polymerase A domain AYM34_RS09560 SM00387 Histidine kinase-like ATPases AYM34_RS09560 SM00388 His Kinase A (phosphoacceptor) domain AYM34_RS09565 SM00448 cheY-homologous receiver domain AYM34_RS09565 SM00862 Transcriptional regulatory protein, C terminal AYM34_RS09575 SM01329 AYM34_RS09575 AYM34_RS09615 SM00919 Malic enzyme, NAD binding domain AYM34_RS09615 SM01274 AYM34_RS09615 AYM34_RS09620 SM00481 DNA polymerase alpha chain like domain AYM34_RS09630 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM34_RS09640 SM00849 Metallo-beta-lactamase superfamily AYM34_RS09655 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AYM34_RS09655 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AYM34_RS09685 SM00981 AYM34_RS09685 AYM34_RS09705 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AYM34_RS09710 SM00363 S4 RNA-binding domain AYM34_RS09710 SM01390 AYM34_RS09710 AYM34_RS09755 SM00563 Phosphate acyltransferases AYM34_RS09760 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AYM34_RS09765 SM00363 S4 RNA-binding domain AYM34_RS09780 SM00725 NEAr Transporter domain AYM34_RS09805 SM00354 helix_turn _helix lactose operon repressor AYM34_RS09815 SM00830 Chorismate mutase type II AYM34_RS09840 SM00843 AYM34_RS09840 AYM34_RS09870 SM00849 Metallo-beta-lactamase superfamily AYM34_RS09910 SM00363 S4 RNA-binding domain AYM34_RS09930 SM00450 Rhodanese Homology Domain AYM34_RS09945 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM34_RS09955 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS10010 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYM34_RS10020 SM00226 Low molecular weight phosphatase family AYM34_RS10025 SM00047 Lysozyme subfamily 2 AYM34_RS10115 SM01234 AYM34_RS10115 AYM34_RS10135 SM00894 Excalibur calcium-binding domain AYM34_RS10275 SM00382 ATPases associated with a variety of cellular activities AYM34_RS10290 SM01260 AYM34_RS10290 AYM34_RS10420 SM00382 ATPases associated with a variety of cellular activities AYM34_RS10450 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM34_RS10485 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS10490 SM00421 helix_turn_helix, Lux Regulon AYM34_RS10490 SM00448 cheY-homologous receiver domain AYM34_RS10545 SM00382 ATPases associated with a variety of cellular activities AYM34_RS10550 SM00062 Bacterial periplasmic substrate-binding proteins AYM34_RS10745 SM00382 ATPases associated with a variety of cellular activities AYM34_RS10755 SM00478 endonuclease III AYM34_RS10825 SM00226 Low molecular weight phosphatase family AYM34_RS10840 SM00421 helix_turn_helix, Lux Regulon AYM34_RS10840 SM00448 cheY-homologous receiver domain AYM34_RS10845 SM00387 Histidine kinase-like ATPases AYM34_RS10905 SM00479 AYM34_RS10905 AYM34_RS10925 SM00046 Diacylglycerol kinase catalytic domain (presumed) AYM34_RS10940 SM00845 GatB domain AYM34_RS10965 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AYM34_RS10965 SM00292 breast cancer carboxy-terminal domain AYM34_RS10965 SM00532 Ligase N family AYM34_RS10985 SM00998 Adenylosuccinate lyase C-terminus AYM34_RS11045 SM00710 Parallel beta-helix repeats AYM34_RS11055 SM01131 AYM34_RS11055 AYM34_RS11115 SM00382 ATPases associated with a variety of cellular activities AYM34_RS11125 SM00382 ATPases associated with a variety of cellular activities AYM34_RS11130 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM34_RS11190 SM00287 Bacterial SH3 domain homologues AYM34_RS11270 SM00635 Bacterial Ig-like domain 2 AYM34_RS11330 SM00507 HNH nucleases AYM34_RS11475 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS11485 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS11490 SM00479 AYM34_RS11490 AYM34_RS11590 SM00883 Chaperonin 10 Kd subunit AYM34_RS11625 SM00793 Accessory gene regulator B AYM34_RS11630 SM00794 Staphylococcal AgrD protein AYM34_RS11640 SM00448 cheY-homologous receiver domain AYM34_RS11640 SM00850 LytTr DNA-binding domain AYM34_RS11655 SM00640 Glycosyl hydrolases family 32 AYM34_RS11660 SM00354 helix_turn _helix lactose operon repressor AYM34_RS11680 SM00881 CoA binding domain AYM34_RS11685 SM00382 ATPases associated with a variety of cellular activities AYM34_RS11695 SM00534 ATPase domain of DNA mismatch repair MUTS family AYM34_RS11745 SM00917 LeuA allosteric (dimerisation) domain AYM34_RS11750 SM01329 AYM34_RS11750 AYM34_RS11810 SM00731 SprT homologues. AYM34_RS11815 SM00316 Ribosomal protein S1-like RNA-binding domain AYM34_RS11815 SM00732 Likely ribonuclease with RNase H fold. AYM34_RS11835 SM00331 Sigma factor PP2C-like phosphatases AYM34_RS11835 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AYM34_RS11855 SM01005 Alanine racemase, C-terminal domain AYM34_RS11900 SM00387 Histidine kinase-like ATPases AYM34_RS11900 SM00388 His Kinase A (phosphoacceptor) domain AYM34_RS11905 SM00448 cheY-homologous receiver domain AYM34_RS11905 SM00862 Transcriptional regulatory protein, C terminal AYM34_RS11910 SM00487 DEAD-like helicases superfamily AYM34_RS11910 SM00490 helicase superfamily c-terminal domain AYM34_RS11945 SM00155 Phospholipase D. Active site motifs. AYM34_RS11950 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AYM34_RS12035 SM00382 ATPases associated with a variety of cellular activities AYM34_RS12095 SM00226 Low molecular weight phosphatase family AYM34_RS12110 SM00937 AYM34_RS12110 AYM34_RS12130 SM00357 Cold shock protein domain AYM34_RS12130 SM00382 ATPases associated with a variety of cellular activities AYM34_RS12130 SM00959 Rho termination factor, N-terminal domain AYM34_RS12205 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AYM34_RS12215 SM01133 AYM34_RS12215 AYM34_RS12255 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AYM34_RS12295 SM00382 ATPases associated with a variety of cellular activities AYM34_RS12520 SM00829 Enoylreductase AYM34_RS12525 SM00829 Enoylreductase AYM34_RS12550 SM01133 AYM34_RS12550 AYM34_RS12565 SM00420 helix_turn_helix, Deoxyribose operon repressor AYM34_RS12565 SM01134 AYM34_RS12565 AYM34_RS12595 SM00422 helix_turn_helix, mercury resistance AYM34_RS12650 SM00382 ATPases associated with a variety of cellular activities AYM34_RS12690 SM00382 ATPases associated with a variety of cellular activities AYM34_RS12695 SM00382 ATPases associated with a variety of cellular activities AYM34_RS12705 SM00662 RNA polymerases D AYM34_RS12725 SM00316 Ribosomal protein S1-like RNA-binding domain AYM34_RS12780 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AYM34_RS12785 SM01374 AYM34_RS12785 AYM34_RS12805 SM00322 K homology RNA-binding domain AYM34_RS12820 SM01382 AYM34_RS12820 AYM34_RS12820 SM01383 AYM34_RS12820 AYM34_RS12840 SM01403 AYM34_RS12840 AYM34_RS12855 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AYM34_RS12855 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AYM34_RS12855 SM00493 AYM34_RS12855 AYM34_RS12915 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS12945 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM34_RS12970 SM00852 Probable molybdopterin binding domain AYM34_RS12980 SM00852 Probable molybdopterin binding domain AYM34_RS12990 SM00382 ATPases associated with a variety of cellular activities AYM34_RS13055 SM00988 UreE urease accessory protein, N-terminal domain AYM34_RS13095 SM00342 helix_turn_helix, arabinose operon control protein AYM34_RS13145 SM00047 Lysozyme subfamily 2 AYM34_RS13160 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AYM34_RS13160 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AYM34_RS13175 SM00420 helix_turn_helix, Deoxyribose operon repressor AYM34_RS13330 SM00382 ATPases associated with a variety of cellular activities AYM34_RS13420 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS13440 SM00382 ATPases associated with a variety of cellular activities AYM34_RS13450 SM00448 cheY-homologous receiver domain AYM34_RS13450 SM00862 Transcriptional regulatory protein, C terminal AYM34_RS13455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AYM34_RS13455 SM00387 Histidine kinase-like ATPases AYM34_RS13455 SM00388 His Kinase A (phosphoacceptor) domain AYM34_RS13460 SM00850 LytTr DNA-binding domain AYM34_RS13495 SM00829 Enoylreductase AYM34_RS13550 SM00342 helix_turn_helix, arabinose operon control protein AYM34_RS13575 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS13600 SM00422 helix_turn_helix, mercury resistance AYM34_RS13605 SM00421 helix_turn_helix, Lux Regulon AYM34_RS13605 SM00448 cheY-homologous receiver domain AYM34_RS13610 SM00387 Histidine kinase-like ATPases AYM34_RS13635 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AYM34_RS13715 SM00382 ATPases associated with a variety of cellular activities AYM34_RS13725 SM00062 Bacterial periplasmic substrate-binding proteins AYM34_RS13725 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AYM34_RS13745 SM00855 Phosphoglycerate mutase family AYM34_RS13805 SM00729 Elongator protein 3, MiaB family, Radical SAM AYM34_RS13805 SM00876 Biotin and Thiamin Synthesis associated domain AYM34_RS13830 SM00382 ATPases associated with a variety of cellular activities AYM34_RS13835 SM00382 ATPases associated with a variety of cellular activities AYM34_RS13875 SM00871 Bacterial transcription activator, effector binding domain AYM34_RS13955 SM00116 Domain in cystathionine beta-synthase and other proteins. AYM34_RS13955 SM00382 ATPases associated with a variety of cellular activities AYM34_RS14005 SM00382 ATPases associated with a variety of cellular activities AYM34_RS14050 SM00382 ATPases associated with a variety of cellular activities AYM34_RS14055 SM00382 ATPases associated with a variety of cellular activities AYM34_RS14190 SM00487 DEAD-like helicases superfamily AYM34_RS14190 SM00490 helicase superfamily c-terminal domain AYM34_RS14280 SM00345 helix_turn_helix gluconate operon transcriptional repressor AYM34_RS14280 SM00895 AYM34_RS14280 AYM34_RS14285 SM00422 helix_turn_helix, mercury resistance AYM34_RS14290 SM00954 Region found in RelA / SpoT proteins AYM34_RS14325 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS14335 SM00382 ATPases associated with a variety of cellular activities AYM34_RS14365 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS14395 SM00382 ATPases associated with a variety of cellular activities AYM34_RS14530 SM00382 ATPases associated with a variety of cellular activities AYM34_RS14530 SM01086 C-terminal, D2-small domain, of ClpB protein AYM34_RS14545 SM00899 AYM34_RS14545 AYM34_RS14570 SM01266 AYM34_RS14570 AYM34_RS14775 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AYM34_RS14960 SM00382 ATPases associated with a variety of cellular activities AYM34_RS14965 SM00387 Histidine kinase-like ATPases AYM34_RS14970 SM00448 cheY-homologous receiver domain AYM34_RS14970 SM00862 Transcriptional regulatory protein, C terminal AYM34_RS14980 SM00098 Alkaline phosphatase homologues AYM34_RS14990 SM00347 helix_turn_helix multiple antibiotic resistance protein AYM34_RS15075 SM00047 Lysozyme subfamily 2 AYM34_RS15100 SM00957 SecA DEAD-like domain AYM34_RS15100 SM00958 SecA preprotein cross-linking domain AYM34_RS15130 SM00903 Flavin reductase like domain AYM34_RS15150 SM00903 Flavin reductase like domain AYM34_RS15285 SM00382 ATPases associated with a variety of cellular activities AYM34_RS15300 SM00867 YceI-like domain AYM34_RS15310 SM00450 Rhodanese Homology Domain AYM34_RS15365 SM00382 ATPases associated with a variety of cellular activities AYM34_RS15400 SM00357 Cold shock protein domain AYM34_RS15405 SM00530 Helix-turn-helix XRE-family like proteins AYM34_RS15425 SM00470 ParB-like nuclease domain AYM34_RS15435 SM01228 AYM34_RS15435 AYM34_RS15465 SM00760 Bacterial dnaA protein helix-turn-helix domain