locus-tag class description MKI55_RS00005 PF00308 Bacterial dnaA protein MKI55_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix MKI55_RS00005 PF11638 DnaA N-terminal domain MKI55_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain MKI55_RS00010 PF02767 DNA polymerase III beta subunit, central domain MKI55_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain MKI55_RS00020 PF02463 RecF/RecN/SMC N terminal domain MKI55_RS00025 PF00204 DNA gyrase B MKI55_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus MKI55_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS00025 PF01751 Toprim domain MKI55_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller MKI55_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A MKI55_RS00035 PF01256 Carbohydrate kinase MKI55_RS00040 PF00221 Aromatic amino acid lyase MKI55_RS00045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MKI55_RS00045 PF02403 Seryl-tRNA synthetase N-terminal domain MKI55_RS00060 PF00561 alpha/beta hydrolase fold MKI55_RS00070 PF01368 DHH family MKI55_RS00070 PF02272 DHHA1 domain MKI55_RS00075 PF03948 Ribosomal protein L9, C-terminal domain MKI55_RS00075 PF01281 Ribosomal protein L9, N-terminal domain MKI55_RS00080 PF00772 DnaB-like helicase N terminal domain MKI55_RS00080 PF03796 DnaB-like helicase C terminal domain MKI55_RS00085 PF00709 Adenylosuccinate synthetase MKI55_RS00100 PF00072 Response regulator receiver domain MKI55_RS00100 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS00105 PF00672 HAMP domain MKI55_RS00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS00105 PF00512 His Kinase A (phospho-acceptor) domain MKI55_RS00105 PF13426 PAS domain MKI55_RS00110 PF07435 YycH protein MKI55_RS00120 PF00753 Metallo-beta-lactamase superfamily MKI55_RS00125 PF00149 Calcineurin-like phosphoesterase MKI55_RS00125 PF02872 5'-nucleotidase, C-terminal domain MKI55_RS00130 PF02590 Predicted SPOUT methyltransferase MKI55_RS00160 PF01925 Sulfite exporter TauE/SafE MKI55_RS00165 PF02583 Metal-sensitive transcriptional repressor MKI55_RS00170 PF13686 DsrE/DsrF/DrsH-like family MKI55_RS00175 PF00753 Metallo-beta-lactamase superfamily MKI55_RS00185 PF01207 Dihydrouridine synthase (Dus) MKI55_RS00215 PF00388 Phosphatidylinositol-specific phospholipase C, X domain MKI55_RS00220 PF04507 Csa1 family MKI55_RS00225 PF04507 Csa1 family MKI55_RS00230 PF04507 Csa1 family MKI55_RS00235 PF04507 Csa1 family MKI55_RS00240 PF04507 Csa1 family MKI55_RS00245 PF12833 Helix-turn-helix domain MKI55_RS00250 PF01546 Peptidase family M20/M25/M40 MKI55_RS00250 PF07687 Peptidase dimerisation domain MKI55_RS00255 PF07690 Major Facilitator Superfamily MKI55_RS00260 PF02690 Na+/Pi-cotransporter MKI55_RS00265 PF06100 MCRA family MKI55_RS00270 PF00892 EamA-like transporter family MKI55_RS00275 PF00155 Aminotransferase class I and II MKI55_RS00275 PF00392 Bacterial regulatory proteins, gntR family MKI55_RS00285 PF02652 L-lactate permease MKI55_RS00290 PF04650 YSIRK type signal peptide MKI55_RS00290 PF03373 Octapeptide repeat MKI55_RS00290 PF01476 LysM domain MKI55_RS00290 PF02216 B domain MKI55_RS00290 PF00746 LPXTG cell wall anchor motif MKI55_RS00300 PF01032 FecCD transport family MKI55_RS00305 PF01032 FecCD transport family MKI55_RS00310 PF01497 Periplasmic binding protein MKI55_RS00315 PF00291 Pyridoxal-phosphate dependent enzyme MKI55_RS00320 PF02423 Ornithine cyclodeaminase/mu-crystallin family MKI55_RS00325 PF04183 IucA / IucC family MKI55_RS00325 PF06276 Ferric iron reductase FhuF-like transporter MKI55_RS00330 PF07690 Major Facilitator Superfamily MKI55_RS00330 PF00083 Sugar (and other) transporter MKI55_RS00335 PF06276 Ferric iron reductase FhuF-like transporter MKI55_RS00335 PF04183 IucA / IucC family MKI55_RS00340 PF06276 Ferric iron reductase FhuF-like transporter MKI55_RS00340 PF04183 IucA / IucC family MKI55_RS00345 PF03328 HpcH/HpaI aldolase/citrate lyase family MKI55_RS00350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MKI55_RS00350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MKI55_RS00355 PF02195 ParB-like nuclease domain MKI55_RS00375 PF01370 NAD dependent epimerase/dehydratase family MKI55_RS00380 PF02397 Bacterial sugar transferase MKI55_RS00385 PF00534 Glycosyl transferases group 1 MKI55_RS00400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MKI55_RS00400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MKI55_RS00415 PF00392 Bacterial regulatory proteins, gntR family MKI55_RS00415 PF07702 UTRA domain MKI55_RS00420 PF01048 Phosphorylase superfamily MKI55_RS00425 PF07690 Major Facilitator Superfamily MKI55_RS00430 PF01791 DeoC/LacD family aldolase MKI55_RS00435 PF01676 Metalloenzyme superfamily MKI55_RS00440 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS00445 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS00450 PF00005 ABC transporter MKI55_RS00465 PF02872 5'-nucleotidase, C-terminal domain MKI55_RS00465 PF00149 Calcineurin-like phosphoesterase MKI55_RS00480 PF00465 Iron-containing alcohol dehydrogenase MKI55_RS00480 PF00171 Aldehyde dehydrogenase family MKI55_RS00485 PF02706 Chain length determinant protein MKI55_RS00490 PF13614 AAA domain MKI55_RS00500 PF02719 Polysaccharide biosynthesis protein MKI55_RS00505 PF08485 Polysaccharide biosynthesis protein C-terminal MKI55_RS00505 PF02719 Polysaccharide biosynthesis protein MKI55_RS00510 PF01370 NAD dependent epimerase/dehydratase family MKI55_RS00515 PF02350 UDP-N-acetylglucosamine 2-epimerase MKI55_RS00520 PF00132 Bacterial transferase hexapeptide (six repeats) MKI55_RS00545 PF02397 Bacterial sugar transferase MKI55_RS00555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MKI55_RS00555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain MKI55_RS00555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain MKI55_RS00560 PF02350 UDP-N-acetylglucosamine 2-epimerase MKI55_RS00565 PF03992 Antibiotic biosynthesis monooxygenase MKI55_RS00570 PF04304 Protein of unknown function (DUF454) MKI55_RS00575 PF00171 Aldehyde dehydrogenase family MKI55_RS00580 PF01545 Cation efflux family MKI55_RS00580 PF16916 Dimerisation domain of Zinc Transporter MKI55_RS00595 PF00005 ABC transporter MKI55_RS00605 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS00610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MKI55_RS00610 PF02770 Acyl-CoA dehydrogenase, middle domain MKI55_RS00610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MKI55_RS00615 PF10057 Uncharacterized conserved protein (DUF2294) MKI55_RS00620 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKI55_RS00620 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKI55_RS00630 PF00501 AMP-binding enzyme MKI55_RS00630 PF13193 AMP-binding enzyme C-terminal domain MKI55_RS00630 PF00550 Phosphopantetheine attachment site MKI55_RS00630 PF00668 Condensation domain MKI55_RS00630 PF00975 Thioesterase domain MKI55_RS00645 PF00696 Amino acid kinase family MKI55_RS00650 PF01960 ArgJ family MKI55_RS00655 PF01118 Semialdehyde dehydrogenase, NAD binding domain MKI55_RS00655 PF02774 Semialdehyde dehydrogenase, dimerisation domain MKI55_RS00660 PF00202 Aminotransferase class-III MKI55_RS00665 PF05525 Branched-chain amino acid transport protein MKI55_RS00670 PF00857 Isochorismatase family MKI55_RS00675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKI55_RS00675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKI55_RS00675 PF00205 Thiamine pyrophosphate enzyme, central domain MKI55_RS00685 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKI55_RS00685 PF02378 Phosphotransferase system, EIIC MKI55_RS00685 PF00367 phosphotransferase system, EIIB MKI55_RS00700 PF02378 Phosphotransferase system, EIIC MKI55_RS00700 PF00367 phosphotransferase system, EIIB MKI55_RS00705 PF01418 Helix-turn-helix domain, rpiR family MKI55_RS00705 PF01380 SIS domain MKI55_RS00730 PF00005 ABC transporter MKI55_RS00735 PF00005 ABC transporter MKI55_RS00735 PF02687 FtsX-like permease family MKI55_RS00735 PF12704 MacB-like periplasmic core domain MKI55_RS00755 PF00005 ABC transporter MKI55_RS00770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKI55_RS00770 PF00005 ABC transporter MKI55_RS00775 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS00780 PF12911 N-terminal TM domain of oligopeptide transport permease C MKI55_RS00780 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS00795 PF04507 Csa1 family MKI55_RS00800 PF02525 Flavodoxin-like fold MKI55_RS00805 PF08460 Bacterial SH3 domain MKI55_RS00805 PF01551 Peptidase family M23 MKI55_RS00810 PF00005 ABC transporter MKI55_RS00810 PF03459 TOBE domain MKI55_RS00810 PF17912 MalK OB fold domain MKI55_RS00820 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS00825 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS00830 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MKI55_RS00830 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MKI55_RS00835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain MKI55_RS00835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold MKI55_RS00845 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family MKI55_RS00850 PF07690 Major Facilitator Superfamily MKI55_RS00855 PF12833 Helix-turn-helix domain MKI55_RS00855 PF00072 Response regulator receiver domain MKI55_RS00860 PF06580 Histidine kinase MKI55_RS00870 PF02901 Pyruvate formate lyase-like MKI55_RS00870 PF01228 Glycine radical MKI55_RS00875 PF04055 Radical SAM superfamily MKI55_RS00890 PF04022 Staphylocoagulase repeat MKI55_RS00890 PF08764 Staphylococcus aureus coagulase MKI55_RS00900 PF02803 Thiolase, C-terminal domain MKI55_RS00900 PF00108 Thiolase, N-terminal domain MKI55_RS00905 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain MKI55_RS00905 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain MKI55_RS00910 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MKI55_RS00910 PF00441 Acyl-CoA dehydrogenase, C-terminal domain MKI55_RS00910 PF02770 Acyl-CoA dehydrogenase, middle domain MKI55_RS00915 PF13193 AMP-binding enzyme C-terminal domain MKI55_RS00915 PF00501 AMP-binding enzyme MKI55_RS00920 PF01144 Coenzyme A transferase MKI55_RS00930 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKI55_RS00935 PF04343 Protein of unknown function, DUF488 MKI55_RS00945 PF00970 Oxidoreductase FAD-binding domain MKI55_RS00945 PF00042 Globin MKI55_RS00945 PF00175 Oxidoreductase NAD-binding domain MKI55_RS00955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MKI55_RS00955 PF00056 lactate/malate dehydrogenase, NAD binding domain MKI55_RS00960 PF00367 phosphotransferase system, EIIB MKI55_RS00960 PF02378 Phosphotransferase system, EIIC MKI55_RS00960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKI55_RS00965 PF01156 Inosine-uridine preferring nucleoside hydrolase MKI55_RS00985 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKI55_RS00990 PF03611 PTS system sugar-specific permease component MKI55_RS00995 PF00107 Zinc-binding dehydrogenase MKI55_RS00995 PF08240 Alcohol dehydrogenase GroES-like domain MKI55_RS01005 PF00107 Zinc-binding dehydrogenase MKI55_RS01005 PF08240 Alcohol dehydrogenase GroES-like domain MKI55_RS01010 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MKI55_RS01015 PF00107 Zinc-binding dehydrogenase MKI55_RS01015 PF08240 Alcohol dehydrogenase GroES-like domain MKI55_RS01020 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase MKI55_RS01025 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase MKI55_RS01030 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase MKI55_RS01035 PF08240 Alcohol dehydrogenase GroES-like domain MKI55_RS01035 PF00107 Zinc-binding dehydrogenase MKI55_RS01040 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase MKI55_RS01045 PF00535 Glycosyl transferase family 2 MKI55_RS01045 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 MKI55_RS01050 PF04405 Domain of Unknown function (DUF542) MKI55_RS01050 PF01814 Hemerythrin HHE cation binding domain MKI55_RS01055 PF07694 5TMR of 5TMR-LYT MKI55_RS01055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS01055 PF06580 Histidine kinase MKI55_RS01060 PF04397 LytTr DNA-binding domain MKI55_RS01060 PF00072 Response regulator receiver domain MKI55_RS01065 PF03788 LrgA family MKI55_RS01070 PF04172 LrgB-like family MKI55_RS01075 PF00392 Bacterial regulatory proteins, gntR family MKI55_RS01075 PF00155 Aminotransferase class I and II MKI55_RS01080 PF02378 Phosphotransferase system, EIIC MKI55_RS01080 PF00367 phosphotransferase system, EIIB MKI55_RS01080 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKI55_RS01085 PF00232 Glycosyl hydrolase family 1 MKI55_RS01090 PF13649 Methyltransferase domain MKI55_RS01100 PF00294 pfkB family carbohydrate kinase MKI55_RS01105 PF05025 RbsD / FucU transport protein family MKI55_RS01110 PF06800 Sugar transport protein MKI55_RS01115 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family MKI55_RS01115 PF00356 Bacterial regulatory proteins, lacI family MKI55_RS01130 PF07690 Major Facilitator Superfamily MKI55_RS01135 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family MKI55_RS01140 PF01551 Peptidase family M23 MKI55_RS01145 PF00005 ABC transporter MKI55_RS01165 PF05257 CHAP domain MKI55_RS01165 PF01476 LysM domain MKI55_RS01170 PF06013 Proteins of 100 residues with WXG MKI55_RS01180 PF10661 WXG100 protein secretion system (Wss), protein EssA MKI55_RS01185 PF08817 WXG100 protein secretion system (Wss), protein YukD MKI55_RS01190 PF10140 WXG100 protein secretion system (Wss), protein YukC MKI55_RS01195 PF12538 DNA transporter MKI55_RS01195 PF01580 FtsK/SpoIIIE family MKI55_RS01205 PF06013 Proteins of 100 residues with WXG MKI55_RS01210 PF16887 Domain of unknown function (DUF5081) MKI55_RS01220 PF14449 Pre-toxin TG MKI55_RS01225 PF04634 Protein of unknown function, DUF600 MKI55_RS01245 PF04634 Protein of unknown function, DUF600 MKI55_RS01250 PF04634 Protein of unknown function, DUF600 MKI55_RS01255 PF04634 Protein of unknown function, DUF600 MKI55_RS01260 PF04634 Protein of unknown function, DUF600 MKI55_RS01265 PF04634 Protein of unknown function, DUF600 MKI55_RS01285 PF05525 Branched-chain amino acid transport protein MKI55_RS01290 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) MKI55_RS01295 PF02687 FtsX-like permease family MKI55_RS01300 PF00005 ABC transporter MKI55_RS01320 PF04227 Indigoidine synthase A like protein MKI55_RS01325 PF01773 Na+ dependent nucleoside transporter N-terminus MKI55_RS01325 PF07662 Na+ dependent nucleoside transporter C-terminus MKI55_RS01330 PF00474 Sodium:solute symporter family MKI55_RS01335 PF00701 Dihydrodipicolinate synthetase family MKI55_RS01340 PF00480 ROK family MKI55_RS01345 PF01380 SIS domain MKI55_RS01345 PF01418 Helix-turn-helix domain, rpiR family MKI55_RS01350 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase MKI55_RS01355 PF07670 Nucleoside recognition MKI55_RS01360 PF04650 YSIRK type signal peptide MKI55_RS01370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MKI55_RS01380 PF00296 Luciferase-like monooxygenase MKI55_RS01385 PF01597 Glycine cleavage H-protein MKI55_RS01390 PF01661 Macro domain MKI55_RS01400 PF10437 Bacterial lipoate protein ligase C-terminus MKI55_RS01400 PF03099 Biotin/lipoate A/B protein ligase family MKI55_RS01405 PF16363 GDP-mannose 4,6 dehydratase MKI55_RS01410 PF03611 PTS system sugar-specific permease component MKI55_RS01420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKI55_RS01425 PF03123 CAT RNA binding domain MKI55_RS01425 PF00874 PRD domain MKI55_RS01435 PF01554 MatE MKI55_RS01445 PF07690 Major Facilitator Superfamily MKI55_RS01450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKI55_RS01455 PF00296 Luciferase-like monooxygenase MKI55_RS01460 PF03358 NADPH-dependent FMN reductase MKI55_RS01465 PF03601 Conserved hypothetical protein 698 MKI55_RS01470 PF13302 Acetyltransferase (GNAT) domain MKI55_RS01475 PF09375 Imelysin MKI55_RS01480 PF04261 Dyp-type peroxidase family MKI55_RS01485 PF03239 Iron permease FTR1 family MKI55_RS01490 PF00902 Sec-independent protein translocase protein (TatC) MKI55_RS01495 PF02416 mttA/Hcf106 family MKI55_RS01505 PF01381 Helix-turn-helix MKI55_RS01530 PF02803 Thiolase, C-terminal domain MKI55_RS01530 PF00108 Thiolase, N-terminal domain MKI55_RS01540 PF01717 Cobalamin-independent synthase, Catalytic domain MKI55_RS01540 PF08267 Cobalamin-independent synthase, N-terminal domain MKI55_RS01545 PF02574 Homocysteine S-methyltransferase MKI55_RS01545 PF02219 Methylenetetrahydrofolate reductase MKI55_RS01550 PF01053 Cys/Met metabolism PLP-dependent enzyme MKI55_RS01555 PF01053 Cys/Met metabolism PLP-dependent enzyme MKI55_RS01560 PF17762 HTH domain found in ParB protein MKI55_RS01560 PF02195 ParB-like nuclease domain MKI55_RS01565 PF00924 Mechanosensitive ion channel MKI55_RS01570 PF06107 Bacterial protein of unknown function (DUF951) MKI55_RS01575 PF06071 Protein of unknown function (DUF933) MKI55_RS01575 PF01926 50S ribosome-binding GTPase MKI55_RS01585 PF01250 Ribosomal protein S6 MKI55_RS01590 PF00436 Single-strand binding protein family MKI55_RS01595 PF01084 Ribosomal protein S18 MKI55_RS01610 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01670 PF13192 Thioredoxin domain MKI55_RS01670 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS01675 PF00578 AhpC/TSA family MKI55_RS01675 PF10417 C-terminal domain of 1-Cys peroxiredoxin MKI55_RS01680 PF00881 Nitroreductase family MKI55_RS01685 PF00375 Sodium:dicarboxylate symporter family MKI55_RS01705 PF11181 Heat induced stress protein YflT MKI55_RS01715 PF00860 Permease family MKI55_RS01720 PF00478 IMP dehydrogenase / GMP reductase domain MKI55_RS01720 PF00571 CBS domain MKI55_RS01725 PF00958 GMP synthase C terminal domain MKI55_RS01725 PF00117 Glutamine amidotransferase class-I MKI55_RS01750 PF06993 Protein of unknown function (DUF1304) MKI55_RS01760 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01760 PF09199 Staphylococcal superantigen-like OB-fold domain MKI55_RS01765 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01765 PF09199 Staphylococcal superantigen-like OB-fold domain MKI55_RS01770 PF09199 Staphylococcal superantigen-like OB-fold domain MKI55_RS01770 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01780 PF09199 Staphylococcal superantigen-like OB-fold domain MKI55_RS01780 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01785 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01785 PF09199 Staphylococcal superantigen-like OB-fold domain MKI55_RS01790 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01790 PF09199 Staphylococcal superantigen-like OB-fold domain MKI55_RS01795 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01795 PF09199 Staphylococcal superantigen-like OB-fold domain MKI55_RS01800 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01800 PF09199 Staphylococcal superantigen-like OB-fold domain MKI55_RS01805 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01805 PF09199 Staphylococcal superantigen-like OB-fold domain MKI55_RS01815 PF12161 HsdM N-terminal domain MKI55_RS01815 PF02384 N-6 DNA Methylase MKI55_RS01825 PF09199 Staphylococcal superantigen-like OB-fold domain MKI55_RS01825 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS01840 PF04507 Csa1 family MKI55_RS01845 PF04507 Csa1 family MKI55_RS01850 PF04507 Csa1 family MKI55_RS01855 PF04507 Csa1 family MKI55_RS01860 PF04507 Csa1 family MKI55_RS01865 PF04507 Csa1 family MKI55_RS01870 PF04507 Csa1 family MKI55_RS01875 PF04507 Csa1 family MKI55_RS01880 PF04507 Csa1 family MKI55_RS01885 PF04507 Csa1 family MKI55_RS01910 PF02492 CobW/HypB/UreG, nucleotide-binding domain MKI55_RS01910 PF07683 Cobalamin synthesis protein cobW C-terminal domain MKI55_RS01915 PF17063 Phenol-soluble modulin alpha 4 peptide MKI55_RS01935 PF00361 Proton-conducting membrane transporter MKI55_RS01935 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MKI55_RS01940 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) MKI55_RS01945 PF10057 Uncharacterized conserved protein (DUF2294) MKI55_RS01960 PF12146 Serine aminopeptidase, S33 MKI55_RS01965 PF00209 Sodium:neurotransmitter symporter family MKI55_RS01970 PF00291 Pyridoxal-phosphate dependent enzyme MKI55_RS01975 PF01053 Cys/Met metabolism PLP-dependent enzyme MKI55_RS01980 PF09383 NIL domain MKI55_RS01980 PF00005 ABC transporter MKI55_RS01985 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS01990 PF03180 NLPA lipoprotein MKI55_RS01995 PF01476 LysM domain MKI55_RS01995 PF05257 CHAP domain MKI55_RS02025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKI55_RS02025 PF03466 LysR substrate binding domain MKI55_RS02030 PF00310 Glutamine amidotransferases class-II MKI55_RS02030 PF04898 Glutamate synthase central domain MKI55_RS02030 PF01645 Conserved region in glutamate synthase MKI55_RS02030 PF01493 GXGXG motif MKI55_RS02035 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS02035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster MKI55_RS02045 PF02378 Phosphotransferase system, EIIC MKI55_RS02045 PF00367 phosphotransferase system, EIIB MKI55_RS02050 PF16657 Maltogenic Amylase, C-terminal domain MKI55_RS02050 PF00128 Alpha amylase, catalytic domain MKI55_RS02055 PF00392 Bacterial regulatory proteins, gntR family MKI55_RS02055 PF07702 UTRA domain MKI55_RS02075 PF12169 DNA polymerase III subunits gamma and tau domain III MKI55_RS02080 PF02575 YbaB/EbfC DNA-binding family MKI55_RS02085 PF02132 RecR protein MKI55_RS02085 PF13662 Toprim domain MKI55_RS02110 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain MKI55_RS02110 PF01276 Orn/Lys/Arg decarboxylase, major domain MKI55_RS02115 PF02223 Thymidylate kinase MKI55_RS02120 PF06153 Cyclic-di-AMP receptor MKI55_RS02125 PF09115 DNA polymerase III, delta subunit, C terminal MKI55_RS02130 PF04468 PSP1 C-terminal conserved region MKI55_RS02135 PF06156 Initiation control protein YabA MKI55_RS02140 PF05175 Methyltransferase small domain MKI55_RS02145 PF01541 GIY-YIG catalytic domain MKI55_RS02150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKI55_RS02155 PF08264 Anticodon-binding domain of tRNA MKI55_RS02155 PF01588 Putative tRNA binding domain MKI55_RS02155 PF09334 tRNA synthetases class I (M) MKI55_RS02160 PF01026 TatD related DNase MKI55_RS02165 PF13331 Domain of unknown function (DUF4093) MKI55_RS02165 PF01751 Toprim domain MKI55_RS02170 PF00398 Ribosomal RNA adenine dimethylase MKI55_RS02175 PF06257 Biofilm formation stimulator VEG MKI55_RS02180 PF00288 GHMP kinases N terminal domain MKI55_RS02180 PF08544 GHMP kinases C terminal MKI55_RS02185 PF09182 Bacterial purine repressor, N-terminal MKI55_RS02185 PF00156 Phosphoribosyl transferase domain MKI55_RS02190 PF01042 Endoribonuclease L-PSP MKI55_RS02195 PF04026 SpoVG MKI55_RS02205 PF00483 Nucleotidyl transferase MKI55_RS02205 PF00132 Bacterial transferase hexapeptide (six repeats) MKI55_RS02210 PF14572 Phosphoribosyl synthetase-associated domain MKI55_RS02210 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase MKI55_RS02215 PF14693 Ribosomal protein TL5, C-terminal domain MKI55_RS02215 PF01386 Ribosomal L25p family MKI55_RS02220 PF01195 Peptidyl-tRNA hydrolase MKI55_RS02225 PF02559 CarD-like/TRCF domain MKI55_RS02225 PF00270 DEAD/DEAH box helicase MKI55_RS02225 PF00271 Helicase conserved C-terminal domain MKI55_RS02225 PF17757 UvrB interaction domain MKI55_RS02225 PF03461 TRCF domain MKI55_RS02230 PF14667 Polysaccharide biosynthesis C-terminal domain MKI55_RS02230 PF01943 Polysaccharide biosynthesis protein MKI55_RS02235 PF03819 MazG nucleotide pyrophosphohydrolase domain MKI55_RS02235 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKI55_RS02240 PF01479 S4 domain MKI55_RS02250 PF00575 S1 RNA binding domain MKI55_RS02255 PF01171 PP-loop family MKI55_RS02255 PF11734 TilS substrate C-terminal domain MKI55_RS02260 PF00156 Phosphoribosyl transferase domain MKI55_RS02265 PF01434 Peptidase family M41 MKI55_RS02265 PF06480 FtsH Extracellular MKI55_RS02265 PF00004 ATPase family associated with various cellular activities (AAA) MKI55_RS02265 PF17862 AAA+ lid domain MKI55_RS02270 PF01430 Hsp33 protein MKI55_RS02275 PF00291 Pyridoxal-phosphate dependent enzyme MKI55_RS02280 PF00809 Pterin binding enzyme MKI55_RS02285 PF02152 Dihydroneopterin aldolase MKI55_RS02290 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) MKI55_RS02300 PF00152 tRNA synthetases class II (D, K and N) MKI55_RS02300 PF01336 OB-fold nucleic acid binding domain MKI55_RS02385 PF00392 Bacterial regulatory proteins, gntR family MKI55_RS02385 PF00155 Aminotransferase class I and II MKI55_RS02390 PF01680 SOR/SNZ family MKI55_RS02395 PF01174 SNO glutamine amidotransferase family MKI55_RS02400 PF01773 Na+ dependent nucleoside transporter N-terminus MKI55_RS02400 PF07662 Na+ dependent nucleoside transporter C-terminus MKI55_RS02405 PF17727 CtsR C-terminal dimerization domain MKI55_RS02405 PF05848 CtsR N-terminal HTH domain MKI55_RS02410 PF02151 UvrB/uvrC motif MKI55_RS02415 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain MKI55_RS02420 PF02861 Clp amino terminal domain, pathogenicity island component MKI55_RS02420 PF17871 AAA lid domain MKI55_RS02420 PF07724 AAA domain (Cdc48 subfamily) MKI55_RS02420 PF00004 ATPase family associated with various cellular activities (AAA) MKI55_RS02420 PF10431 C-terminal, D2-small domain, of ClpB protein MKI55_RS02425 PF18073 Rubredoxin metal binding domain MKI55_RS02435 PF00749 tRNA synthetases class I (E and Q), catalytic domain MKI55_RS02440 PF00132 Bacterial transferase hexapeptide (six repeats) MKI55_RS02445 PF01406 tRNA synthetases class I (C) catalytic domain MKI55_RS02445 PF09190 DALR domain MKI55_RS02450 PF00636 Ribonuclease III domain MKI55_RS02455 PF08032 RNA 2'-O ribose methyltransferase substrate binding MKI55_RS02455 PF00588 SpoU rRNA Methylase family MKI55_RS02470 PF00471 Ribosomal protein L33 MKI55_RS02475 PF00584 SecE/Sec61-gamma subunits of protein translocation complex MKI55_RS02480 PF00467 KOW motif MKI55_RS02480 PF02357 Transcription termination factor nusG MKI55_RS02485 PF03946 Ribosomal protein L11, N-terminal domain MKI55_RS02485 PF00298 Ribosomal protein L11, RNA binding domain MKI55_RS02490 PF00687 Ribosomal protein L1p/L10e family MKI55_RS02495 PF00466 Ribosomal protein L10 MKI55_RS02500 PF16320 Ribosomal protein L7/L12 dimerisation domain MKI55_RS02500 PF00542 Ribosomal protein L7/L12 C-terminal domain MKI55_RS02505 PF05175 Methyltransferase small domain MKI55_RS02510 PF04560 RNA polymerase Rpb2, domain 7 MKI55_RS02510 PF00562 RNA polymerase Rpb2, domain 6 MKI55_RS02510 PF10385 RNA polymerase beta subunit external 1 domain MKI55_RS02510 PF04565 RNA polymerase Rpb2, domain 3 MKI55_RS02510 PF04561 RNA polymerase Rpb2, domain 2 MKI55_RS02510 PF04563 RNA polymerase beta subunit MKI55_RS02515 PF05000 RNA polymerase Rpb1, domain 4 MKI55_RS02515 PF04998 RNA polymerase Rpb1, domain 5 MKI55_RS02515 PF04997 RNA polymerase Rpb1, domain 1 MKI55_RS02515 PF04983 RNA polymerase Rpb1, domain 3 MKI55_RS02515 PF00623 RNA polymerase Rpb1, domain 2 MKI55_RS02520 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family MKI55_RS02525 PF00164 Ribosomal protein S12/S23 MKI55_RS02530 PF00177 Ribosomal protein S7p/S5e MKI55_RS02535 PF00679 Elongation factor G C-terminus MKI55_RS02535 PF14492 Elongation Factor G, domain II MKI55_RS02535 PF03764 Elongation factor G, domain IV MKI55_RS02535 PF00009 Elongation factor Tu GTP binding domain MKI55_RS02535 PF03144 Elongation factor Tu domain 2 MKI55_RS02540 PF03143 Elongation factor Tu C-terminal domain MKI55_RS02540 PF00009 Elongation factor Tu GTP binding domain MKI55_RS02540 PF03144 Elongation factor Tu domain 2 MKI55_RS02545 PF07687 Peptidase dimerisation domain MKI55_RS02545 PF01546 Peptidase family M20/M25/M40 MKI55_RS02550 PF00155 Aminotransferase class I and II MKI55_RS02555 PF01965 DJ-1/PfpI family MKI55_RS02560 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKI55_RS02560 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MKI55_RS02565 PF01370 NAD dependent epimerase/dehydratase family MKI55_RS02570 PF01063 Amino-transferase class IV MKI55_RS02580 PF01712 Deoxynucleoside kinase MKI55_RS02585 PF01712 Deoxynucleoside kinase MKI55_RS02590 PF14437 MafB19-like deaminase MKI55_RS02600 PF03358 NADPH-dependent FMN reductase MKI55_RS02605 PF04650 YSIRK type signal peptide MKI55_RS02605 PF17210 SdrD B-like domain MKI55_RS02605 PF00746 LPXTG cell wall anchor motif MKI55_RS02605 PF17961 Bacterial Ig domain MKI55_RS02605 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MKI55_RS02610 PF17961 Bacterial Ig domain MKI55_RS02610 PF00746 LPXTG cell wall anchor motif MKI55_RS02610 PF17210 SdrD B-like domain MKI55_RS02610 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MKI55_RS02610 PF04650 YSIRK type signal peptide MKI55_RS02615 PF17961 Bacterial Ig domain MKI55_RS02615 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MKI55_RS02615 PF04650 YSIRK type signal peptide MKI55_RS02615 PF17210 SdrD B-like domain MKI55_RS02615 PF00746 LPXTG cell wall anchor motif MKI55_RS02620 PF00534 Glycosyl transferases group 1 MKI55_RS02630 PF02649 Type I GTP cyclohydrolase folE2 MKI55_RS02635 PF02585 GlcNAc-PI de-N-acetylase MKI55_RS02645 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase MKI55_RS02650 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MKI55_RS02655 PF01380 SIS domain MKI55_RS02665 PF07690 Major Facilitator Superfamily MKI55_RS02670 PF13193 AMP-binding enzyme C-terminal domain MKI55_RS02670 PF00501 AMP-binding enzyme MKI55_RS02675 PF00108 Thiolase, N-terminal domain MKI55_RS02675 PF02803 Thiolase, C-terminal domain MKI55_RS02690 PF17412 Family of unknown function MKI55_RS02695 PF08543 Phosphomethylpyrimidine kinase MKI55_RS02700 PF03167 Uracil DNA glycosylase superfamily MKI55_RS02710 PF04241 Protein of unknown function (DUF423) MKI55_RS02730 PF06778 Chlorite dismutase MKI55_RS02735 PF01515 Phosphate acetyl/butaryl transferase MKI55_RS02740 PF03099 Biotin/lipoate A/B protein ligase family MKI55_RS02745 PF08544 GHMP kinases C terminal MKI55_RS02745 PF00288 GHMP kinases N terminal domain MKI55_RS02755 PF08544 GHMP kinases C terminal MKI55_RS02755 PF00288 GHMP kinases N terminal domain MKI55_RS02760 PF07293 Protein of unknown function (DUF1450) MKI55_RS02765 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS02765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKI55_RS02800 PF00248 Aldo/keto reductase family MKI55_RS02805 PF03358 NADPH-dependent FMN reductase MKI55_RS02815 PF01966 HD domain MKI55_RS02820 PF08741 YwhD family MKI55_RS02825 PF08240 Alcohol dehydrogenase GroES-like domain MKI55_RS02825 PF00107 Zinc-binding dehydrogenase MKI55_RS02840 PF05746 DALR anticodon binding domain MKI55_RS02840 PF00750 tRNA synthetases class I (R) MKI55_RS02840 PF03485 Arginyl tRNA synthetase N terminal domain MKI55_RS02850 PF01497 Periplasmic binding protein MKI55_RS02855 PF01032 FecCD transport family MKI55_RS02860 PF13419 Haloacid dehalogenase-like hydrolase MKI55_RS02865 PF00561 alpha/beta hydrolase fold MKI55_RS02880 PF12697 Alpha/beta hydrolase family MKI55_RS02905 PF00589 Phage integrase family MKI55_RS02910 PF13244 Domain of unknown function (DUF4040) MKI55_RS02910 PF00361 Proton-conducting membrane transporter MKI55_RS02910 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MKI55_RS02915 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter MKI55_RS02920 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MKI55_RS02925 PF00361 Proton-conducting membrane transporter MKI55_RS02930 PF01899 Na+/H+ ion antiporter subunit MKI55_RS02935 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) MKI55_RS02940 PF03334 Na+/H+ antiporter subunit MKI55_RS02945 PF00999 Sodium/hydrogen exchanger family MKI55_RS02960 PF01297 Zinc-uptake complex component A periplasmic MKI55_RS02965 PF00950 ABC 3 transport family MKI55_RS02970 PF00005 ABC transporter MKI55_RS02975 PF01325 Iron dependent repressor, N-terminal DNA binding domain MKI55_RS02975 PF02742 Iron dependent repressor, metal binding and dimerisation domain MKI55_RS02975 PF18357 Diphteria toxin repressor SH3 domain MKI55_RS02985 PF03808 Glycosyl transferase WecB/TagA/CpsF family MKI55_RS02990 PF00005 ABC transporter MKI55_RS02995 PF01061 ABC-2 type transporter MKI55_RS03000 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase MKI55_RS03005 PF00535 Glycosyl transferase family 2 MKI55_RS03010 PF01467 Cytidylyltransferase-like MKI55_RS03015 PF00768 D-alanyl-D-alanine carboxypeptidase MKI55_RS03015 PF07943 Penicillin-binding protein 5, C-terminal domain MKI55_RS03020 PF00664 ABC transporter transmembrane region MKI55_RS03020 PF00005 ABC transporter MKI55_RS03025 PF01773 Na+ dependent nucleoside transporter N-terminus MKI55_RS03025 PF07662 Na+ dependent nucleoside transporter C-terminus MKI55_RS03035 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MKI55_RS03035 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 MKI55_RS03040 PF00005 ABC transporter MKI55_RS03045 PF01032 FecCD transport family MKI55_RS03050 PF01032 FecCD transport family MKI55_RS03055 PF02733 Dak1 domain MKI55_RS03060 PF02734 DAK2 domain MKI55_RS03065 PF03610 PTS system fructose IIA component MKI55_RS03095 PF01370 NAD dependent epimerase/dehydratase family MKI55_RS03100 PF00072 Response regulator receiver domain MKI55_RS03100 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS03105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS03110 PF00005 ABC transporter MKI55_RS03115 PF02687 FtsX-like permease family MKI55_RS03120 PF01865 Protein of unknown function DUF47 MKI55_RS03125 PF01384 Phosphate transporter family MKI55_RS03130 PF05257 CHAP domain MKI55_RS03130 PF01476 LysM domain MKI55_RS03140 PF12833 Helix-turn-helix domain MKI55_RS03140 PF02311 AraC-like ligand binding domain MKI55_RS03150 PF01709 Transcriptional regulator MKI55_RS03170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKI55_RS03170 PF03466 LysR substrate binding domain MKI55_RS03175 PF07690 Major Facilitator Superfamily MKI55_RS03180 PF04306 Protein of unknown function (DUF456) MKI55_RS03205 PF13302 Acetyltransferase (GNAT) domain MKI55_RS03210 PF03641 Possible lysine decarboxylase MKI55_RS03215 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 MKI55_RS03225 PF02673 Bacitracin resistance protein BacA MKI55_RS03230 PF00664 ABC transporter transmembrane region MKI55_RS03230 PF00005 ABC transporter MKI55_RS03235 PF00005 ABC transporter MKI55_RS03235 PF00664 ABC transporter transmembrane region MKI55_RS03240 PF01047 MarR family MKI55_RS03245 PF02492 CobW/HypB/UreG, nucleotide-binding domain MKI55_RS03245 PF07683 Cobalamin synthesis protein cobW C-terminal domain MKI55_RS03250 PF00248 Aldo/keto reductase family MKI55_RS03260 PF00939 Sodium:sulfate symporter transmembrane region MKI55_RS03265 PF03441 FAD binding domain of DNA photolyase MKI55_RS03265 PF00875 DNA photolyase MKI55_RS03285 PF07690 Major Facilitator Superfamily MKI55_RS03295 PF04073 Aminoacyl-tRNA editing domain MKI55_RS03300 PF08220 DeoR-like helix-turn-helix domain MKI55_RS03300 PF00455 DeoR C terminal sensor domain MKI55_RS03305 PF00294 pfkB family carbohydrate kinase MKI55_RS03315 PF01979 Amidohydrolase family MKI55_RS03320 PF03471 Transporter associated domain MKI55_RS03320 PF01595 Cyclin M transmembrane N-terminal domain MKI55_RS03320 PF00571 CBS domain MKI55_RS03325 PF00248 Aldo/keto reductase family MKI55_RS03330 PF00535 Glycosyl transferase family 2 MKI55_RS03335 PF00512 His Kinase A (phospho-acceptor) domain MKI55_RS03335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS03340 PF00072 Response regulator receiver domain MKI55_RS03340 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS03360 PF04055 Radical SAM superfamily MKI55_RS03365 PF01242 6-pyruvoyl tetrahydropterin synthase MKI55_RS03370 PF06508 Queuosine biosynthesis protein QueC MKI55_RS03375 PF00117 Glutamine amidotransferase class-I MKI55_RS03375 PF02885 Glycosyl transferase family, helical bundle domain MKI55_RS03375 PF00591 Glycosyl transferase family, a/b domain MKI55_RS03380 PF04715 Anthranilate synthase component I, N terminal region MKI55_RS03380 PF00425 chorismate binding enzyme MKI55_RS03405 PF00884 Sulfatase MKI55_RS03410 PF16326 ABC transporter C-terminal domain MKI55_RS03410 PF12848 ABC transporter MKI55_RS03410 PF00005 ABC transporter MKI55_RS03415 PF00270 DEAD/DEAH box helicase MKI55_RS03415 PF00271 Helicase conserved C-terminal domain MKI55_RS03415 PF00570 HRDC domain MKI55_RS03415 PF09382 RQC domain MKI55_RS03415 PF16124 RecQ zinc-binding MKI55_RS03420 PF00571 CBS domain MKI55_RS03420 PF00005 ABC transporter MKI55_RS03425 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS03430 PF00155 Aminotransferase class I and II MKI55_RS03435 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) MKI55_RS03440 PF00781 Diacylglycerol kinase catalytic domain MKI55_RS03450 PF00854 POT family MKI55_RS03460 PF14489 QueF-like protein MKI55_RS03470 PF07972 NrdI Flavodoxin like MKI55_RS03475 PF08343 Ribonucleotide reductase N-terminal MKI55_RS03475 PF02867 Ribonucleotide reductase, barrel domain MKI55_RS03475 PF00317 Ribonucleotide reductase, all-alpha domain MKI55_RS03480 PF00268 Ribonucleotide reductase, small chain MKI55_RS03490 PF01032 FecCD transport family MKI55_RS03495 PF01032 FecCD transport family MKI55_RS03500 PF00005 ABC transporter MKI55_RS03505 PF01497 Periplasmic binding protein MKI55_RS03515 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain MKI55_RS03515 PF01565 FAD binding domain MKI55_RS03535 PF02595 Glycerate kinase family MKI55_RS03540 PF01546 Peptidase family M20/M25/M40 MKI55_RS03540 PF07687 Peptidase dimerisation domain MKI55_RS03555 PF00990 Diguanylate cyclase, GGDEF domain MKI55_RS03555 PF07694 5TMR of 5TMR-LYT MKI55_RS03560 PF00953 Glycosyl transferase family 4 MKI55_RS03565 PF01205 Uncharacterized protein family UPF0029 MKI55_RS03565 PF09186 Domain of unknown function (DUF1949) MKI55_RS03570 PF02645 Uncharacterised protein, DegV family COG1307 MKI55_RS03575 PF04851 Type III restriction enzyme, res subunit MKI55_RS03575 PF00271 Helicase conserved C-terminal domain MKI55_RS03585 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein MKI55_RS03585 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus MKI55_RS03590 PF07516 SecA Wing and Scaffold domain MKI55_RS03590 PF01043 SecA preprotein cross-linking domain MKI55_RS03590 PF02810 SEC-C motif MKI55_RS03590 PF07517 SecA DEAD-like domain MKI55_RS03610 PF01476 LysM domain MKI55_RS03610 PF05257 CHAP domain MKI55_RS03625 PF17757 UvrB interaction domain MKI55_RS03625 PF12344 Ultra-violet resistance protein B MKI55_RS03625 PF02151 UvrB/uvrC motif MKI55_RS03625 PF04851 Type III restriction enzyme, res subunit MKI55_RS03625 PF00271 Helicase conserved C-terminal domain MKI55_RS03630 PF17760 UvrA interaction domain MKI55_RS03630 PF17755 UvrA DNA-binding domain MKI55_RS03630 PF00005 ABC transporter MKI55_RS03635 PF02603 HPr Serine kinase N terminus MKI55_RS03635 PF07475 HPr Serine kinase C-terminal domain MKI55_RS03640 PF01790 Prolipoprotein diacylglyceryl transferase MKI55_RS03645 PF14602 Hexapeptide repeat of succinyl-transferase MKI55_RS03655 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS03660 PF03668 P-loop ATPase protein family MKI55_RS03665 PF01933 Uncharacterised protein family UPF0052 MKI55_RS03670 PF10298 WhiA N-terminal LAGLIDADG-like domain MKI55_RS03670 PF14527 WhiA LAGLIDADG-like domain MKI55_RS03670 PF02650 WhiA C-terminal HTH domain MKI55_RS03675 PF00574 Clp protease MKI55_RS03680 PF01370 NAD dependent epimerase/dehydratase family MKI55_RS03680 PF08338 Domain of unknown function (DUF1731) MKI55_RS03690 PF04198 Putative sugar-binding domain MKI55_RS03695 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MKI55_RS03695 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MKI55_RS03700 PF00162 Phosphoglycerate kinase MKI55_RS03705 PF00121 Triosephosphate isomerase MKI55_RS03710 PF06415 BPG-independent PGAM N-terminus (iPGM_N) MKI55_RS03710 PF01676 Metalloenzyme superfamily MKI55_RS03715 PF00113 Enolase, C-terminal TIM barrel domain MKI55_RS03715 PF03952 Enolase, N-terminal domain MKI55_RS03725 PF03840 Preprotein translocase SecG subunit MKI55_RS03730 PF12146 Serine aminopeptidase, S33 MKI55_RS03735 PF17876 Cold shock domain MKI55_RS03735 PF08206 Ribonuclease B OB domain MKI55_RS03735 PF00773 RNB domain MKI55_RS03735 PF00575 S1 RNA binding domain MKI55_RS03740 PF01668 SmpB protein MKI55_RS03835 PF03592 Terminase small subunit MKI55_RS03835 PF10668 Phage terminase small subunit MKI55_RS03870 PF01497 Periplasmic binding protein MKI55_RS03875 PF04072 Leucine carboxyl methyltransferase MKI55_RS03910 PF04650 YSIRK type signal peptide MKI55_RS03910 PF17961 Bacterial Ig domain MKI55_RS03910 PF00746 LPXTG cell wall anchor motif MKI55_RS03910 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MKI55_RS03910 PF04650 YSIRK type signal peptide MKI55_RS03910 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MKI55_RS03910 PF00746 LPXTG cell wall anchor motif MKI55_RS03910 PF17961 Bacterial Ig domain MKI55_RS03930 PF00565 Staphylococcal nuclease homologue MKI55_RS03935 PF00313 'Cold-shock' DNA-binding domain MKI55_RS03975 PF00300 Histidine phosphatase superfamily (branch 1) MKI55_RS03980 PF01810 LysE type translocator MKI55_RS03990 PF02566 OsmC-like protein MKI55_RS03995 PF01487 Type I 3-dehydroquinase MKI55_RS04005 PF00085 Thioredoxin MKI55_RS04010 PF03960 ArsC family MKI55_RS04015 PF01597 Glycine cleavage H-protein MKI55_RS04020 PF09234 Domain of unknown function (DUF1963) MKI55_RS04025 PF01751 Toprim domain MKI55_RS04035 PF00005 ABC transporter MKI55_RS04035 PF09383 NIL domain MKI55_RS04040 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS04045 PF03180 NLPA lipoprotein MKI55_RS04050 PF05532 CsbD-like MKI55_RS04060 PF00005 ABC transporter MKI55_RS04065 PF01458 Uncharacterized protein family (UPF0051) MKI55_RS04070 PF00266 Aminotransferase class-V MKI55_RS04075 PF01592 NifU-like N terminal domain MKI55_RS04080 PF01458 Uncharacterized protein family (UPF0051) MKI55_RS04095 PF00571 CBS domain MKI55_RS04095 PF03471 Transporter associated domain MKI55_RS04095 PF01595 Cyclin M transmembrane N-terminal domain MKI55_RS04100 PF03060 Nitronate monooxygenase MKI55_RS04110 PF01904 Protein of unknown function DUF72 MKI55_RS04115 PF01925 Sulfite exporter TauE/SafE MKI55_RS04125 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family MKI55_RS04125 PF04055 Radical SAM superfamily MKI55_RS04130 PF06265 Protein of unknown function (DUF1027) MKI55_RS04150 PF01934 Protein of unknown function DUF86 MKI55_RS04155 PF13344 Haloacid dehalogenase-like hydrolase MKI55_RS04160 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKI55_RS04160 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKI55_RS04175 PF00501 AMP-binding enzyme MKI55_RS04175 PF13193 AMP-binding enzyme C-terminal domain MKI55_RS04180 PF03062 MBOAT, membrane-bound O-acyltransferase family MKI55_RS04185 PF00550 Phosphopantetheine attachment site MKI55_RS04190 PF04914 DltD protein MKI55_RS04195 PF01106 NifU-like domain MKI55_RS04200 PF07315 Protein of unknown function (DUF1462) MKI55_RS04205 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS04210 PF07293 Protein of unknown function (DUF1450) MKI55_RS04215 PF01521 Iron-sulphur cluster biosynthesis MKI55_RS04220 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS04225 PF00883 Cytosol aminopeptidase family, catalytic domain MKI55_RS04225 PF02789 Cytosol aminopeptidase family, N-terminal domain MKI55_RS04230 PF03553 Na+/H+ antiporter family MKI55_RS04230 PF13726 Na+-H+ antiporter family MKI55_RS04235 PF03061 Thioesterase superfamily MKI55_RS04245 PF03334 Na+/H+ antiporter subunit MKI55_RS04250 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) MKI55_RS04255 PF01899 Na+/H+ ion antiporter subunit MKI55_RS04260 PF00361 Proton-conducting membrane transporter MKI55_RS04265 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L MKI55_RS04270 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter MKI55_RS04275 PF13244 Domain of unknown function (DUF4040) MKI55_RS04275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus MKI55_RS04275 PF00361 Proton-conducting membrane transporter MKI55_RS04285 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD MKI55_RS04290 PF00575 S1 RNA binding domain MKI55_RS04295 PF00724 NADH:flavin oxidoreductase / NADH oxidase family MKI55_RS04300 PF00202 Aminotransferase class-III MKI55_RS04305 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain MKI55_RS04305 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MKI55_RS04310 PF03009 Glycerophosphoryl diester phosphodiesterase family MKI55_RS04315 PF14698 Argininosuccinate lyase C-terminal MKI55_RS04315 PF00206 Lyase MKI55_RS04320 PF00764 Arginosuccinate synthase MKI55_RS04325 PF00342 Phosphoglucose isomerase MKI55_RS04330 PF09335 SNARE associated Golgi protein MKI55_RS04335 PF10502 Signal peptidase, peptidase S26 MKI55_RS04340 PF10502 Signal peptidase, peptidase S26 MKI55_RS04345 PF12705 PD-(D/E)XK nuclease superfamily MKI55_RS04345 PF13361 UvrD-like helicase C-terminal domain MKI55_RS04350 PF00580 UvrD/REP helicase N-terminal domain MKI55_RS04350 PF13361 UvrD-like helicase C-terminal domain MKI55_RS04350 PF12705 PD-(D/E)XK nuclease superfamily MKI55_RS04355 PF01557 Fumarylacetoacetate (FAA) hydrolase family MKI55_RS04360 PF07457 Protein of unknown function (DUF1516) MKI55_RS04365 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKI55_RS04365 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS04375 PF01883 Iron-sulfur cluster assembly protein MKI55_RS04380 PF01757 Acyltransferase family MKI55_RS04385 PF00004 ATPase family associated with various cellular activities (AAA) MKI55_RS04385 PF10431 C-terminal, D2-small domain, of ClpB protein MKI55_RS04385 PF02861 Clp amino terminal domain, pathogenicity island component MKI55_RS04385 PF17871 AAA lid domain MKI55_RS04385 PF07724 AAA domain (Cdc48 subfamily) MKI55_RS04410 PF01161 Phosphatidylethanolamine-binding protein MKI55_RS04415 PF03642 MAP domain MKI55_RS04425 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal MKI55_RS04425 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III MKI55_RS04430 PF02801 Beta-ketoacyl synthase, C-terminal domain MKI55_RS04430 PF00109 Beta-ketoacyl synthase, N-terminal domain MKI55_RS04440 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS04445 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS04445 PF12911 N-terminal TM domain of oligopeptide transport permease C MKI55_RS04450 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKI55_RS04450 PF00005 ABC transporter MKI55_RS04455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKI55_RS04455 PF00005 ABC transporter MKI55_RS04460 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKI55_RS04465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKI55_RS04470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKI55_RS04470 PF00005 ABC transporter MKI55_RS04475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region MKI55_RS04475 PF00005 ABC transporter MKI55_RS04480 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS04485 PF12911 N-terminal TM domain of oligopeptide transport permease C MKI55_RS04485 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS04490 PF00579 tRNA synthetases class I (W and Y) MKI55_RS04495 PF03960 ArsC family MKI55_RS04500 PF05389 Negative regulator of genetic competence (MecA) MKI55_RS04510 PF08439 Oligopeptidase F MKI55_RS04510 PF01432 Peptidase family M3 MKI55_RS04520 PF01152 Bacterial-like globin MKI55_RS04535 PF04607 Region found in RelA / SpoT proteins MKI55_RS04540 PF01513 ATP-NAD kinase MKI55_RS04545 PF00849 RNA pseudouridylate synthase MKI55_RS04550 PF03448 MgtE intracellular N domain MKI55_RS04550 PF01769 Divalent cation transporter MKI55_RS04550 PF00571 CBS domain MKI55_RS04555 PF02080 TrkA-C domain MKI55_RS04555 PF00999 Sodium/hydrogen exchanger family MKI55_RS04555 PF02254 TrkA-N domain MKI55_RS04575 PF01594 AI-2E family transporter MKI55_RS04580 PF01235 Sodium:alanine symporter family MKI55_RS04595 PF07690 Major Facilitator Superfamily MKI55_RS04600 PF04101 Glycosyltransferase family 28 C-terminal domain MKI55_RS04600 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase MKI55_RS04605 PF02875 Mur ligase family, glutamate ligase domain MKI55_RS04605 PF01225 Mur ligase family, catalytic domain MKI55_RS04605 PF08245 Mur ligase middle domain MKI55_RS04615 PF16658 Class II release factor RF3, C-terminal domain MKI55_RS04615 PF03144 Elongation factor Tu domain 2 MKI55_RS04615 PF00009 Elongation factor Tu GTP binding domain MKI55_RS04620 PF03741 Integral membrane protein TerC family MKI55_RS04635 PF13180 PDZ domain MKI55_RS04640 PF02386 Cation transport protein MKI55_RS04645 PF00149 Calcineurin-like phosphoesterase MKI55_RS04645 PF02872 5'-nucleotidase, C-terminal domain MKI55_RS04660 PF06338 ComK protein MKI55_RS04670 PF10437 Bacterial lipoate protein ligase C-terminus MKI55_RS04670 PF03099 Biotin/lipoate A/B protein ligase family MKI55_RS04675 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) MKI55_RS04710 PF02687 FtsX-like permease family MKI55_RS04710 PF00005 ABC transporter MKI55_RS04710 PF12704 MacB-like periplasmic core domain MKI55_RS04725 PF01497 Periplasmic binding protein MKI55_RS04735 PF05154 TM2 domain MKI55_RS04740 PF00583 Acetyltransferase (GNAT) family MKI55_RS04745 PF01040 UbiA prenyltransferase family MKI55_RS04755 PF00425 chorismate binding enzyme MKI55_RS04760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKI55_RS04760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKI55_RS04760 PF16582 Middle domain of thiamine pyrophosphate MKI55_RS04765 PF00561 alpha/beta hydrolase fold MKI55_RS04770 PF00378 Enoyl-CoA hydratase/isomerase MKI55_RS04775 PF09023 Staphostatin B MKI55_RS04780 PF14731 Staphopain proregion MKI55_RS04780 PF05543 Staphopain peptidase C47 MKI55_RS04790 PF00155 Aminotransferase class I and II MKI55_RS04795 PF01757 Acyltransferase family MKI55_RS04810 PF13457 GW (Gly-Tryp) dipeptide domain MKI55_RS04810 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MKI55_RS04815 PF13673 Acetyltransferase (GNAT) domain MKI55_RS04820 PF10804 Protein of unknown function (DUF2538) MKI55_RS04825 PF03816 Cell envelope-related transcriptional attenuator domain MKI55_RS04830 PF00144 Beta-lactamase MKI55_RS04835 PF03626 Prokaryotic Cytochrome C oxidase subunit IV MKI55_RS04840 PF00510 Cytochrome c oxidase subunit III MKI55_RS04845 PF00115 Cytochrome C and Quinol oxidase polypeptide I MKI55_RS04850 PF02790 Cytochrome C oxidase subunit II, transmembrane domain MKI55_RS04850 PF00116 Cytochrome C oxidase subunit II, periplasmic domain MKI55_RS04865 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain MKI55_RS04865 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain MKI55_RS04870 PF00731 AIR carboxylase MKI55_RS04875 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKI55_RS04875 PF02222 ATP-grasp domain MKI55_RS04875 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain MKI55_RS04880 PF01259 SAICAR synthetase MKI55_RS04885 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase MKI55_RS04895 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain MKI55_RS04895 PF02769 AIR synthase related protein, C-terminal domain MKI55_RS04895 PF00586 AIR synthase related protein, N-terminal domain MKI55_RS04900 PF13537 Glutamine amidotransferase domain MKI55_RS04900 PF00156 Phosphoribosyl transferase domain MKI55_RS04905 PF00586 AIR synthase related protein, N-terminal domain MKI55_RS04905 PF02769 AIR synthase related protein, C-terminal domain MKI55_RS04910 PF00551 Formyl transferase MKI55_RS04915 PF01808 AICARFT/IMPCHase bienzyme MKI55_RS04915 PF02142 MGS-like domain MKI55_RS04920 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain MKI55_RS04920 PF02843 Phosphoribosylglycinamide synthetase, C domain MKI55_RS04920 PF02844 Phosphoribosylglycinamide synthetase, N domain MKI55_RS04925 PF02361 Cobalt transport protein MKI55_RS04930 PF00005 ABC transporter MKI55_RS04935 PF09819 ABC-type cobalt transport system, permease component MKI55_RS04950 PF10672 S-adenosylmethionine-dependent methyltransferase MKI55_RS04950 PF17785 PUA-like domain MKI55_RS04960 PF00381 PTS HPr component phosphorylation site MKI55_RS04965 PF05524 PEP-utilising enzyme, N-terminal MKI55_RS04965 PF00391 PEP-utilising enzyme, mobile domain MKI55_RS04965 PF02896 PEP-utilising enzyme, TIM barrel domain MKI55_RS04970 PF00462 Glutaredoxin MKI55_RS04975 PF01654 Cytochrome bd terminal oxidase subunit I MKI55_RS04980 PF02322 Cytochrome bd terminal oxidase subunit II MKI55_RS04985 PF02080 TrkA-C domain MKI55_RS04985 PF02254 TrkA-N domain MKI55_RS04990 PF00753 Metallo-beta-lactamase superfamily MKI55_RS04990 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MKI55_RS04990 PF17770 Ribonuclease J C-terminal domain MKI55_RS04995 PF07288 Protein of unknown function (DUF1447) MKI55_RS05005 PF01327 Polypeptide deformylase MKI55_RS05015 PF00676 Dehydrogenase E1 component MKI55_RS05020 PF02779 Transketolase, pyrimidine binding domain MKI55_RS05020 PF02780 Transketolase, C-terminal domain MKI55_RS05025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MKI55_RS05025 PF02817 e3 binding domain MKI55_RS05025 PF00364 Biotin-requiring enzyme MKI55_RS05030 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS05030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKI55_RS05035 PF05256 Uncharacterised protein family (UPF0223) MKI55_RS05045 PF08402 TOBE domain MKI55_RS05045 PF00005 ABC transporter MKI55_RS05050 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS05055 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS05060 PF13416 Bacterial extracellular solute-binding protein MKI55_RS05075 PF01566 Natural resistance-associated macrophage protein MKI55_RS05080 PF06335 Protein of unknown function (DUF1054) MKI55_RS05085 PF00459 Inositol monophosphatase family MKI55_RS05095 PF03144 Elongation factor Tu domain 2 MKI55_RS05095 PF00009 Elongation factor Tu GTP binding domain MKI55_RS05095 PF00679 Elongation factor G C-terminus MKI55_RS05095 PF14492 Elongation Factor G, domain II MKI55_RS05110 PF07408 Protein of unknown function (DUF1507) MKI55_RS05115 PF01098 Cell cycle protein MKI55_RS05120 PF02785 Biotin carboxylase C-terminal domain MKI55_RS05120 PF00289 Biotin carboxylase, N-terminal domain MKI55_RS05120 PF00364 Biotin-requiring enzyme MKI55_RS05120 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MKI55_RS05120 PF00682 HMGL-like MKI55_RS05120 PF02436 Conserved carboxylase domain MKI55_RS05125 PF02628 Cytochrome oxidase assembly protein MKI55_RS05130 PF01040 UbiA prenyltransferase family MKI55_RS05145 PF06133 Control of competence regulator ComK, YlbF/YmcA MKI55_RS05150 PF03009 Glycerophosphoryl diester phosphodiesterase family MKI55_RS05155 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) MKI55_RS05170 PF01467 Cytidylyltransferase-like MKI55_RS05175 PF05636 HIGH Nucleotidyl Transferase MKI55_RS05185 PF01783 Ribosomal L32p protein family MKI55_RS05190 PF04650 YSIRK type signal peptide MKI55_RS05190 PF05031 Iron Transport-associated domain MKI55_RS05190 PF00746 LPXTG cell wall anchor motif MKI55_RS05195 PF05031 Iron Transport-associated domain MKI55_RS05195 PF00746 LPXTG cell wall anchor motif MKI55_RS05200 PF05031 Iron Transport-associated domain MKI55_RS05210 PF01497 Periplasmic binding protein MKI55_RS05215 PF01032 FecCD transport family MKI55_RS05220 PF04203 Sortase domain MKI55_RS05225 PF03992 Antibiotic biosynthesis monooxygenase MKI55_RS05235 PF00588 SpoU rRNA Methylase family MKI55_RS05235 PF08032 RNA 2'-O ribose methyltransferase substrate binding MKI55_RS05240 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain MKI55_RS05240 PF01409 tRNA synthetases class II core domain (F) MKI55_RS05245 PF03484 tRNA synthetase B5 domain MKI55_RS05245 PF01588 Putative tRNA binding domain MKI55_RS05245 PF03147 Ferredoxin-fold anticodon binding domain MKI55_RS05245 PF03483 B3/4 domain MKI55_RS05245 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain MKI55_RS05250 PF11858 Domain of unknown function (DUF3378) MKI55_RS05250 PF01351 Ribonuclease HII MKI55_RS05265 PF14716 Helix-hairpin-helix domain MKI55_RS05265 PF02811 PHP domain MKI55_RS05265 PF14791 DNA polymerase beta thumb MKI55_RS05270 PF00488 MutS domain V MKI55_RS05270 PF01713 Smr domain MKI55_RS05275 PF00085 Thioredoxin MKI55_RS05285 PF08459 UvrC Helix-hairpin-helix N-terminal MKI55_RS05285 PF01541 GIY-YIG catalytic domain MKI55_RS05285 PF02151 UvrB/uvrC motif MKI55_RS05290 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit MKI55_RS05295 PF02910 Fumarate reductase flavoprotein C-term MKI55_RS05295 PF00890 FAD binding domain MKI55_RS05300 PF13183 4Fe-4S dicluster domain MKI55_RS05300 PF13085 2Fe-2S iron-sulfur cluster binding domain MKI55_RS05305 PF01177 Asp/Glu/Hydantoin racemase MKI55_RS05310 PF01725 Ham1 family MKI55_RS05315 PF12850 Calcineurin-like phosphoesterase superfamily domain MKI55_RS05335 PF16104 Formyl peptide receptor-like 1 inhibitory protein MKI55_RS05345 PF12199 Extracellular fibrinogen binding protein C terminal MKI55_RS05375 PF07968 Leukocidin/Hemolysin toxin family MKI55_RS05390 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS05395 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS05400 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS05405 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MKI55_RS05405 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MKI55_RS05410 PF00696 Amino acid kinase family MKI55_RS05415 PF03606 C4-dicarboxylate anaerobic carrier MKI55_RS05440 PF05480 Staphylococcus haemolytic protein MKI55_RS05445 PF05480 Staphylococcus haemolytic protein MKI55_RS05450 PF13419 Haloacid dehalogenase-like hydrolase MKI55_RS05460 PF10079 Bacillithiol biosynthesis BshC MKI55_RS05465 PF02381 MraZ protein, putative antitoxin-like MKI55_RS05470 PF01795 MraW methylase family MKI55_RS05475 PF04977 Septum formation initiator MKI55_RS05480 PF03793 PASTA domain MKI55_RS05480 PF03717 Penicillin-binding Protein dimerisation domain MKI55_RS05480 PF00905 Penicillin binding protein transpeptidase domain MKI55_RS05485 PF00953 Glycosyl transferase family 4 MKI55_RS05490 PF02875 Mur ligase family, glutamate ligase domain MKI55_RS05490 PF08245 Mur ligase middle domain MKI55_RS05495 PF03799 Cell division protein FtsQ MKI55_RS05495 PF08478 POTRA domain, FtsQ-type MKI55_RS05500 PF02491 SHS2 domain inserted in FTSA MKI55_RS05505 PF12327 FtsZ family, C-terminal domain MKI55_RS05505 PF00091 Tubulin/FtsZ family, GTPase domain MKI55_RS05510 PF02578 Multi-copper polyphenol oxidoreductase laccase MKI55_RS05515 PF01168 Alanine racemase, N-terminal domain MKI55_RS05520 PF04472 Cell division protein SepF MKI55_RS05525 PF02325 YGGT family MKI55_RS05530 PF17774 Putative RNA-binding domain in YlmH MKI55_RS05530 PF01479 S4 domain MKI55_RS05535 PF05103 DivIVA protein MKI55_RS05540 PF08264 Anticodon-binding domain of tRNA MKI55_RS05540 PF00133 tRNA synthetases class I (I, L, M and V) MKI55_RS05540 PF06827 Zinc finger found in FPG and IleRS MKI55_RS05545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKI55_RS05555 PF01252 Signal peptidase (SPase) II MKI55_RS05560 PF01479 S4 domain MKI55_RS05560 PF00849 RNA pseudouridylate synthase MKI55_RS05565 PF00156 Phosphoribosyl transferase domain MKI55_RS05570 PF00860 Permease family MKI55_RS05575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MKI55_RS05575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MKI55_RS05580 PF01979 Amidohydrolase family MKI55_RS05585 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain MKI55_RS05585 PF00117 Glutamine amidotransferase class-I MKI55_RS05590 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MKI55_RS05590 PF02142 MGS-like domain MKI55_RS05590 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MKI55_RS05595 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family MKI55_RS05600 PF00156 Phosphoribosyl transferase domain MKI55_RS05615 PF05670 NFACT protein RNA binding domain MKI55_RS05620 PF00625 Guanylate kinase MKI55_RS05625 PF01192 RNA polymerase Rpb6 MKI55_RS05630 PF04127 DNA / pantothenate metabolism flavoprotein MKI55_RS05630 PF02441 Flavoprotein MKI55_RS05635 PF18319 PriA DNA helicase Cys-rich region (CRR) domain MKI55_RS05635 PF00271 Helicase conserved C-terminal domain MKI55_RS05635 PF17764 3′ DNA-binding domain (3′BD) MKI55_RS05635 PF18074 Primosomal protein N C-terminal domain MKI55_RS05635 PF04851 Type III restriction enzyme, res subunit MKI55_RS05645 PF05154 TM2 domain MKI55_RS05650 PF01327 Polypeptide deformylase MKI55_RS05655 PF02911 Formyl transferase, C-terminal domain MKI55_RS05655 PF00551 Formyl transferase MKI55_RS05660 PF01189 16S rRNA methyltransferase RsmB/F MKI55_RS05660 PF01029 NusB family MKI55_RS05665 PF04055 Radical SAM superfamily MKI55_RS05675 PF03793 PASTA domain MKI55_RS05675 PF00069 Protein kinase domain MKI55_RS05680 PF03193 RsgA GTPase MKI55_RS05680 PF16745 RsgA N-terminal domain MKI55_RS05685 PF00834 Ribulose-phosphate 3 epimerase family MKI55_RS05695 PF00830 Ribosomal L28 family MKI55_RS05700 PF03780 Asp23 family, cell envelope-related function MKI55_RS05705 PF02734 DAK2 domain MKI55_RS05705 PF13684 Dihydroxyacetone kinase family MKI55_RS05710 PF00270 DEAD/DEAH box helicase MKI55_RS05710 PF00271 Helicase conserved C-terminal domain MKI55_RS05710 PF17191 RecG wedge domain MKI55_RS05715 PF03061 Thioesterase superfamily MKI55_RS05720 PF02504 Fatty acid synthesis protein MKI55_RS05725 PF00698 Acyl transferase domain MKI55_RS05735 PF00550 Phosphopantetheine attachment site MKI55_RS05740 PF00035 Double-stranded RNA binding motif MKI55_RS05740 PF14622 Ribonuclease-III-like MKI55_RS05745 PF02463 RecF/RecN/SMC N terminal domain MKI55_RS05745 PF06470 SMC proteins Flexible Hinge Domain MKI55_RS05750 PF02881 SRP54-type protein, helical bundle domain MKI55_RS05750 PF00448 SRP54-type protein, GTPase domain MKI55_RS05755 PF04297 Putative helix-turn-helix protein, YlxM / p13 like MKI55_RS05760 PF00448 SRP54-type protein, GTPase domain MKI55_RS05760 PF02881 SRP54-type protein, helical bundle domain MKI55_RS05760 PF02978 Signal peptide binding domain MKI55_RS05765 PF00886 Ribosomal protein S16 MKI55_RS05770 PF05239 PRC-barrel domain MKI55_RS05770 PF01782 RimM N-terminal domain MKI55_RS05775 PF01746 tRNA (Guanine-1)-methyltransferase MKI55_RS05780 PF01245 Ribosomal protein L19 MKI55_RS05790 PF01926 50S ribosome-binding GTPase MKI55_RS05795 PF01351 Ribonuclease HII MKI55_RS05800 PF00549 CoA-ligase MKI55_RS05800 PF08442 ATP-grasp domain MKI55_RS05805 PF00549 CoA-ligase MKI55_RS05805 PF02629 CoA binding domain MKI55_RS05810 PF01476 LysM domain MKI55_RS05810 PF05257 CHAP domain MKI55_RS05815 PF02388 FemAB family MKI55_RS05820 PF02481 DNA recombination-mediator protein A MKI55_RS05825 PF01396 Topoisomerase DNA binding C4 zinc finger MKI55_RS05825 PF01131 DNA topoisomerase MKI55_RS05825 PF01751 Toprim domain MKI55_RS05830 PF01134 Glucose inhibited division protein A MKI55_RS05835 PF02899 Phage integrase, N-terminal SAM-like domain MKI55_RS05835 PF00589 Phage integrase family MKI55_RS05840 PF00227 Proteasome subunit MKI55_RS05845 PF00004 ATPase family associated with various cellular activities (AAA) MKI55_RS05845 PF07724 AAA domain (Cdc48 subfamily) MKI55_RS05845 PF10431 C-terminal, D2-small domain, of ClpB protein MKI55_RS05850 PF06018 CodY GAF-like domain MKI55_RS05850 PF08222 CodY helix-turn-helix domain MKI55_RS05860 PF00318 Ribosomal protein S2 MKI55_RS05870 PF00889 Elongation factor TS MKI55_RS05875 PF00696 Amino acid kinase family MKI55_RS05880 PF01765 Ribosome recycling factor MKI55_RS05885 PF01255 Putative undecaprenyl diphosphate synthase MKI55_RS05895 PF13180 PDZ domain MKI55_RS05895 PF02163 Peptidase family M50 MKI55_RS05900 PF03129 Anticodon binding domain MKI55_RS05900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MKI55_RS05900 PF04073 Aminoacyl-tRNA editing domain MKI55_RS05905 PF14480 DNA polymerase III polC-type N-terminus I MKI55_RS05905 PF11490 DNA polymerase III polC-type N-terminus II MKI55_RS05905 PF00929 Exonuclease MKI55_RS05905 PF02811 PHP domain MKI55_RS05905 PF14579 Helix-hairpin-helix motif MKI55_RS05905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MKI55_RS05905 PF07733 Bacterial DNA polymerase III alpha NTPase domain MKI55_RS05910 PF02576 RimP N-terminal domain MKI55_RS05910 PF17384 RimP C-terminal SH3 domain MKI55_RS05915 PF08529 NusA N-terminal domain MKI55_RS05915 PF13184 NusA-like KH domain MKI55_RS05915 PF00575 S1 RNA binding domain MKI55_RS05920 PF04296 Protein of unknown function (DUF448) MKI55_RS05925 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family MKI55_RS05930 PF04760 Translation initiation factor IF-2, N-terminal region MKI55_RS05930 PF00009 Elongation factor Tu GTP binding domain MKI55_RS05930 PF11987 Translation-initiation factor 2 MKI55_RS05935 PF02033 Ribosome-binding factor A MKI55_RS05940 PF16198 tRNA pseudouridylate synthase B C-terminal domain MKI55_RS05940 PF01509 TruB family pseudouridylate synthase (N terminal domain) MKI55_RS05945 PF06574 FAD synthetase MKI55_RS05945 PF01687 Riboflavin kinase MKI55_RS05950 PF00312 Ribosomal protein S15 MKI55_RS05955 PF00013 KH domain MKI55_RS05955 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain MKI55_RS05955 PF01138 3' exoribonuclease family, domain 1 MKI55_RS05955 PF03725 3' exoribonuclease family, domain 2 MKI55_RS05955 PF00575 S1 RNA binding domain MKI55_RS05960 PF00753 Metallo-beta-lactamase superfamily MKI55_RS05960 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain MKI55_RS05960 PF17770 Ribonuclease J C-terminal domain MKI55_RS05965 PF17854 FtsK alpha domain MKI55_RS05965 PF09397 Ftsk gamma domain MKI55_RS05965 PF01580 FtsK/SpoIIIE family MKI55_RS05970 PF00392 Bacterial regulatory proteins, gntR family MKI55_RS05970 PF07702 UTRA domain MKI55_RS05975 PF05193 Peptidase M16 inactive domain MKI55_RS05980 PF00675 Insulinase (Peptidase family M16) MKI55_RS05980 PF05193 Peptidase M16 inactive domain MKI55_RS05990 PF11868 Protein of unknown function (DUF3388) MKI55_RS06000 PF01066 CDP-alcohol phosphatidyltransferase MKI55_RS06005 PF02464 Competence-damaged protein MKI55_RS06005 PF18146 Damage-inducible protein CinA KH domain MKI55_RS06005 PF00994 Probable molybdopterin binding domain MKI55_RS06010 PF00154 recA bacterial DNA recombination protein MKI55_RS06015 PF01966 HD domain MKI55_RS06015 PF00013 KH domain MKI55_RS06015 PF12072 Domain of unknown function (DUF3552) MKI55_RS06025 PF13277 YmdB-like protein MKI55_RS06030 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II MKI55_RS06030 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase MKI55_RS06030 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg MKI55_RS06035 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKI55_RS06040 PF01910 Thiamine-binding protein MKI55_RS06045 PF04055 Radical SAM superfamily MKI55_RS06045 PF01938 TRAM domain MKI55_RS06045 PF00919 Uncharacterized protein family UPF0004 MKI55_RS06060 PF01624 MutS domain I MKI55_RS06060 PF05192 MutS domain III MKI55_RS06060 PF05188 MutS domain II MKI55_RS06060 PF00488 MutS domain V MKI55_RS06060 PF05190 MutS family domain IV MKI55_RS06065 PF08676 MutL C terminal dimerisation domain MKI55_RS06065 PF01119 DNA mismatch repair protein, C-terminal domain MKI55_RS06070 PF04309 Glycerol-3-phosphate responsive antiterminator MKI55_RS06075 PF00230 Major intrinsic protein MKI55_RS06080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKI55_RS06080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MKI55_RS06085 PF01266 FAD dependent oxidoreductase MKI55_RS06085 PF16901 C-terminal domain of alpha-glycerophosphate oxidase MKI55_RS06100 PF17209 Hfq protein MKI55_RS06105 PF00255 Glutathione peroxidase MKI55_RS06110 PF01926 50S ribosome-binding GTPase MKI55_RS06110 PF16360 GTP-binding GTPase Middle Region MKI55_RS06110 PF13167 GTP-binding GTPase N-terminal MKI55_RS06115 PF06838 Methionine gamma-lyase MKI55_RS06120 PF13411 MerR HTH family regulatory protein MKI55_RS06125 PF00120 Glutamine synthetase, catalytic domain MKI55_RS06125 PF03951 Glutamine synthetase, beta-Grasp domain MKI55_RS06185 PF13091 PLD-like domain MKI55_RS06185 PF13396 Phospholipase_D-nuclease N-terminal MKI55_RS06190 PF00005 ABC transporter MKI55_RS06205 PF00196 Bacterial regulatory proteins, luxR family MKI55_RS06205 PF00072 Response regulator receiver domain MKI55_RS06215 PF00565 Staphylococcal nuclease homologue MKI55_RS06230 PF13840 ACT domain MKI55_RS06230 PF00696 Amino acid kinase family MKI55_RS06235 PF00742 Homoserine dehydrogenase MKI55_RS06235 PF03447 Homoserine dehydrogenase, NAD binding domain MKI55_RS06235 PF01842 ACT domain MKI55_RS06240 PF00291 Pyridoxal-phosphate dependent enzyme MKI55_RS06245 PF08544 GHMP kinases C terminal MKI55_RS06245 PF00288 GHMP kinases N terminal domain MKI55_RS06265 PF00324 Amino acid permease MKI55_RS06270 PF06628 Catalase-related immune-responsive MKI55_RS06270 PF00199 Catalase MKI55_RS06275 PF00471 Ribosomal protein L33 MKI55_RS06280 PF00253 Ribosomal protein S14p/S29e MKI55_RS06285 PF00478 IMP dehydrogenase / GMP reductase domain MKI55_RS06295 PF00188 Cysteine-rich secretory protein family MKI55_RS06300 PF00717 Peptidase S24-like MKI55_RS06300 PF01726 LexA DNA binding domain MKI55_RS06310 PF05979 Bacterial protein of unknown function (DUF896) MKI55_RS06315 PF02779 Transketolase, pyrimidine binding domain MKI55_RS06315 PF02780 Transketolase, C-terminal domain MKI55_RS06315 PF00456 Transketolase, thiamine diphosphate binding domain MKI55_RS06320 PF03672 Uncharacterised protein family (UPF0154) MKI55_RS06330 PF07301 Protein of unknown function (DUF1453) MKI55_RS06335 PF12320 Type 5 capsule protein repressor C-terminal domain MKI55_RS06335 PF00149 Calcineurin-like phosphoesterase MKI55_RS06340 PF13476 AAA domain MKI55_RS06345 PF01741 Large-conductance mechanosensitive channel, MscL MKI55_RS06350 PF02028 BCCT, betaine/carnitine/choline family transporter MKI55_RS06355 PF00694 Aconitase C-terminal domain MKI55_RS06355 PF00330 Aconitase family (aconitate hydratase) MKI55_RS06360 PF03061 Thioesterase superfamily MKI55_RS06370 PF02660 Glycerol-3-phosphate acyltransferase MKI55_RS06375 PF01751 Toprim domain MKI55_RS06375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS06375 PF00986 DNA gyrase B subunit, carboxyl terminus MKI55_RS06375 PF00204 DNA gyrase B MKI55_RS06380 PF00521 DNA gyrase/topoisomerase IV, subunit A MKI55_RS06380 PF03989 DNA gyrase C-terminal domain, beta-propeller MKI55_RS06385 PF01235 Sodium:alanine symporter family MKI55_RS06390 PF03123 CAT RNA binding domain MKI55_RS06390 PF00874 PRD domain MKI55_RS06400 PF01594 AI-2E family transporter MKI55_RS06405 PF09924 Uncharacterised conserved protein (DUF2156) MKI55_RS06405 PF03706 Lysylphosphatidylglycerol synthase TM region MKI55_RS06410 PF01625 Peptide methionine sulfoxide reductase MKI55_RS06415 PF03816 Cell envelope-related transcriptional attenuator domain MKI55_RS06420 PF01361 Tautomerase enzyme MKI55_RS06425 PF11799 impB/mucB/samB family C-terminal domain MKI55_RS06425 PF11798 IMS family HHH motif MKI55_RS06425 PF00817 impB/mucB/samB family MKI55_RS06430 PF02153 Prephenate dehydrogenase MKI55_RS06435 PF05343 M42 glutamyl aminopeptidase MKI55_RS06440 PF00425 chorismate binding enzyme MKI55_RS06440 PF04715 Anthranilate synthase component I, N terminal region MKI55_RS06445 PF00117 Glutamine amidotransferase class-I MKI55_RS06450 PF00591 Glycosyl transferase family, a/b domain MKI55_RS06455 PF00218 Indole-3-glycerol phosphate synthase MKI55_RS06460 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase MKI55_RS06465 PF00291 Pyridoxal-phosphate dependent enzyme MKI55_RS06470 PF00290 Tryptophan synthase alpha chain MKI55_RS06475 PF02388 FemAB family MKI55_RS06480 PF02388 FemAB family MKI55_RS06500 PF00005 ABC transporter MKI55_RS06505 PF00005 ABC transporter MKI55_RS06510 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS06515 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS06530 PF01432 Peptidase family M3 MKI55_RS06530 PF08439 Oligopeptidase F MKI55_RS06535 PF01895 PhoU domain MKI55_RS06540 PF00005 ABC transporter MKI55_RS06545 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS06550 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS06555 PF12849 PBP superfamily domain MKI55_RS06565 PF13509 S1 domain MKI55_RS06565 PF17783 CvfB-like winged helix domain MKI55_RS06570 PF12848 ABC transporter MKI55_RS06570 PF00005 ABC transporter MKI55_RS06575 PF13840 ACT domain MKI55_RS06575 PF01842 ACT domain MKI55_RS06575 PF00696 Amino acid kinase family MKI55_RS06580 PF02774 Semialdehyde dehydrogenase, dimerisation domain MKI55_RS06580 PF01118 Semialdehyde dehydrogenase, NAD binding domain MKI55_RS06585 PF00701 Dihydrodipicolinate synthetase family MKI55_RS06590 PF05173 Dihydrodipicolinate reductase, C-terminus MKI55_RS06590 PF01113 Dihydrodipicolinate reductase, N-terminus MKI55_RS06595 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal MKI55_RS06595 PF00132 Bacterial transferase hexapeptide (six repeats) MKI55_RS06595 PF14602 Hexapeptide repeat of succinyl-transferase MKI55_RS06600 PF01546 Peptidase family M20/M25/M40 MKI55_RS06605 PF00842 Alanine racemase, C-terminal domain MKI55_RS06605 PF01168 Alanine racemase, N-terminal domain MKI55_RS06610 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain MKI55_RS06610 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain MKI55_RS06620 PF00313 'Cold-shock' DNA-binding domain MKI55_RS06630 PF00708 Acylphosphatase MKI55_RS06640 PF05816 Toxic anion resistance protein (TelA) MKI55_RS06645 PF05525 Branched-chain amino acid transport protein MKI55_RS06650 PF00092 von Willebrand factor type A domain MKI55_RS06655 PF07728 AAA domain (dynein-related subfamily) MKI55_RS06655 PF08406 CbbQ/NirQ/NorQ C-terminal MKI55_RS06670 PF00364 Biotin-requiring enzyme MKI55_RS06670 PF02817 e3 binding domain MKI55_RS06670 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MKI55_RS06675 PF00676 Dehydrogenase E1 component MKI55_RS06675 PF16870 2-oxoglutarate dehydrogenase C-terminal MKI55_RS06675 PF02779 Transketolase, pyrimidine binding domain MKI55_RS06680 PF18719 ArlS sensor domain MKI55_RS06680 PF00512 His Kinase A (phospho-acceptor) domain MKI55_RS06680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS06685 PF00072 Response regulator receiver domain MKI55_RS06685 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS06700 PF01569 PAP2 superfamily MKI55_RS06705 PF04101 Glycosyltransferase family 28 C-terminal domain MKI55_RS06705 PF03033 Glycosyltransferase family 28 N-terminal domain MKI55_RS06715 PF13180 PDZ domain MKI55_RS06715 PF03572 Peptidase family S41 MKI55_RS06715 PF01471 Putative peptidoglycan binding domain MKI55_RS06720 PF06855 YozE SAM-like fold MKI55_RS06725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKI55_RS06730 PF01641 SelR domain MKI55_RS06735 PF01625 Peptide methionine sulfoxide reductase MKI55_RS06740 PF02645 Uncharacterised protein, DegV family COG1307 MKI55_RS06745 PF00186 Dihydrofolate reductase MKI55_RS06750 PF00303 Thymidylate synthase MKI55_RS06755 PF06491 Disulphide isomerase MKI55_RS06765 PF08712 Scaffold protein Nfu/NifU N terminal MKI55_RS06765 PF13769 Virulence factor MKI55_RS06770 PF10782 Zinc-finger MKI55_RS06775 PF02592 Putative vitamin uptake transporter MKI55_RS06785 PF07564 Domain of Unknown Function (DUF1542) MKI55_RS06785 PF01468 GA module MKI55_RS06785 PF04650 YSIRK type signal peptide MKI55_RS06790 PF07690 Major Facilitator Superfamily MKI55_RS06795 PF13520 Amino acid permease MKI55_RS06800 PF00291 Pyridoxal-phosphate dependent enzyme MKI55_RS06805 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MKI55_RS06805 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MKI55_RS06810 PF01367 5'-3' exonuclease, C-terminal SAM fold MKI55_RS06810 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MKI55_RS06815 PF00350 Dynamin family MKI55_RS06830 PF02926 THUMP domain MKI55_RS06830 PF01170 Putative RNA methylase family UPF0020 MKI55_RS06840 PF05103 DivIVA protein MKI55_RS06845 PF06908 YspA SLOG family MKI55_RS06860 PF03838 Recombination protein U MKI55_RS06865 PF00912 Transglycosylase MKI55_RS06865 PF00905 Penicillin binding protein transpeptidase domain MKI55_RS06875 PF10576 Iron-sulfur binding domain of endonuclease III MKI55_RS06875 PF00730 HhH-GPD superfamily base excision DNA repair protein MKI55_RS06875 PF00633 Helix-hairpin-helix motif MKI55_RS06880 PF07261 Replication initiation and membrane attachment MKI55_RS06885 PF00152 tRNA synthetases class II (D, K and N) MKI55_RS06885 PF01336 OB-fold nucleic acid binding domain MKI55_RS06890 PF13307 Helicase C-terminal domain MKI55_RS06890 PF00929 Exonuclease MKI55_RS06895 PF02237 Biotin protein ligase C terminal domain MKI55_RS06895 PF03099 Biotin/lipoate A/B protein ligase family MKI55_RS06895 PF08279 HTH domain MKI55_RS06900 PF01743 Poly A polymerase head domain MKI55_RS06900 PF12627 Probable RNA and SrmB- binding site of polymerase A MKI55_RS06900 PF13735 tRNA nucleotidyltransferase domain 2 putative MKI55_RS06905 PF00534 Glycosyl transferases group 1 MKI55_RS06905 PF13439 Glycosyltransferase Family 4 MKI55_RS06910 PF03819 MazG nucleotide pyrophosphohydrolase domain MKI55_RS06915 PF04298 Putative neutral zinc metallopeptidase MKI55_RS06920 PF07187 Protein of unknown function (DUF1405) MKI55_RS06925 PF08864 UPF0302 domain MKI55_RS06925 PF08858 IDEAL domain MKI55_RS06935 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MKI55_RS06940 PF01761 3-dehydroquinate synthase MKI55_RS06945 PF01264 Chorismate synthase MKI55_RS06955 PF00334 Nucleoside diphosphate kinase MKI55_RS06960 PF00348 Polyprenyl synthetase MKI55_RS06965 PF01209 ubiE/COQ5 methyltransferase family MKI55_RS06975 PF00216 Bacterial DNA-binding protein MKI55_RS06980 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus MKI55_RS06980 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus MKI55_RS06985 PF01926 50S ribosome-binding GTPase MKI55_RS06985 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal MKI55_RS06990 PF00575 S1 RNA binding domain MKI55_RS07005 PF02224 Cytidylate kinase MKI55_RS07010 PF17763 Glutaminase/Asparaginase C-terminal domain MKI55_RS07010 PF00710 Asparaginase, N-terminal MKI55_RS07025 PF01476 LysM domain MKI55_RS07030 PF00271 Helicase conserved C-terminal domain MKI55_RS07030 PF00270 DEAD/DEAH box helicase MKI55_RS07045 PF12822 ECF transporter, substrate-specific component MKI55_RS07080 PF00512 His Kinase A (phospho-acceptor) domain MKI55_RS07080 PF18698 Histidine kinase sensor domain MKI55_RS07080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS07080 PF00672 HAMP domain MKI55_RS07085 PF00072 Response regulator receiver domain MKI55_RS07085 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS07090 PF01479 S4 domain MKI55_RS07090 PF00849 RNA pseudouridylate synthase MKI55_RS07095 PF04079 Segregation and condensation complex subunit ScpB MKI55_RS07100 PF02616 Segregation and condensation protein ScpA MKI55_RS07110 PF02899 Phage integrase, N-terminal SAM-like domain MKI55_RS07110 PF00589 Phage integrase family MKI55_RS07115 PF01475 Ferric uptake regulator family MKI55_RS07120 PF00293 NUDIX domain MKI55_RS07125 PF00248 Aldo/keto reductase family MKI55_RS07135 PF00106 short chain dehydrogenase MKI55_RS07140 PF03807 NADP oxidoreductase coenzyme F420-dependent MKI55_RS07140 PF14748 Pyrroline-5-carboxylate reductase dimerisation MKI55_RS07145 PF12706 Beta-lactamase superfamily domain MKI55_RS07150 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain MKI55_RS07150 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain MKI55_RS07160 PF00128 Alpha amylase, catalytic domain MKI55_RS07160 PF16657 Maltogenic Amylase, C-terminal domain MKI55_RS07165 PF00356 Bacterial regulatory proteins, lacI family MKI55_RS07185 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase MKI55_RS07185 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain MKI55_RS07190 PF01546 Peptidase family M20/M25/M40 MKI55_RS07190 PF07687 Peptidase dimerisation domain MKI55_RS07200 PF11728 Putative aromatic acid exporter C-terminal domain MKI55_RS07200 PF06081 Aromatic acid exporter family member 1 MKI55_RS07205 PF06491 Disulphide isomerase MKI55_RS07210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) MKI55_RS07210 PF00364 Biotin-requiring enzyme MKI55_RS07210 PF02817 e3 binding domain MKI55_RS07215 PF02779 Transketolase, pyrimidine binding domain MKI55_RS07215 PF02780 Transketolase, C-terminal domain MKI55_RS07220 PF00676 Dehydrogenase E1 component MKI55_RS07225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain MKI55_RS07225 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS07230 PF13476 AAA domain MKI55_RS07235 PF01316 Arginine repressor, DNA binding domain MKI55_RS07235 PF02863 Arginine repressor, C-terminal domain MKI55_RS07240 PF00348 Polyprenyl synthetase MKI55_RS07245 PF02609 Exonuclease VII small subunit MKI55_RS07250 PF13742 OB-fold nucleic acid binding domain MKI55_RS07250 PF02601 Exonuclease VII, large subunit MKI55_RS07255 PF01029 NusB family MKI55_RS07260 PF03780 Asp23 family, cell envelope-related function MKI55_RS07265 PF02785 Biotin carboxylase C-terminal domain MKI55_RS07265 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MKI55_RS07265 PF00289 Biotin carboxylase, N-terminal domain MKI55_RS07270 PF00364 Biotin-requiring enzyme MKI55_RS07275 PF08207 Elongation factor P (EF-P) KOW-like domain MKI55_RS07275 PF01132 Elongation factor P (EF-P) OB domain MKI55_RS07275 PF09285 Elongation factor P, C-terminal MKI55_RS07280 PF01321 Creatinase/Prolidase N-terminal domain MKI55_RS07280 PF00557 Metallopeptidase family M24 MKI55_RS07295 PF03099 Biotin/lipoate A/B protein ligase family MKI55_RS07300 PF00581 Rhodanese-like domain MKI55_RS07305 PF00266 Aminotransferase class-V MKI55_RS07310 PF02347 Glycine cleavage system P-protein MKI55_RS07315 PF01571 Aminomethyltransferase folate-binding domain MKI55_RS07315 PF08669 Glycine cleavage T-protein C-terminal barrel domain MKI55_RS07320 PF01202 Shikimate kinase MKI55_RS07345 PF07963 Prokaryotic N-terminal methylation motif MKI55_RS07350 PF00482 Type II secretion system (T2SS), protein F MKI55_RS07355 PF00437 Type II/IV secretion system protein MKI55_RS07360 PF00753 Metallo-beta-lactamase superfamily MKI55_RS07365 PF01910 Thiamine-binding protein MKI55_RS07370 PF00480 ROK family MKI55_RS07375 PF06014 Bacterial protein of unknown function (DUF910) MKI55_RS07385 PF01812 5-formyltetrahydrofolate cyclo-ligase family MKI55_RS07390 PF00471 Ribosomal protein L33 MKI55_RS07395 PF00905 Penicillin binding protein transpeptidase domain MKI55_RS07395 PF03717 Penicillin-binding Protein dimerisation domain MKI55_RS07400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain MKI55_RS07400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain MKI55_RS07405 PF01475 Ferric uptake regulator family MKI55_RS07410 PF00950 ABC 3 transport family MKI55_RS07415 PF00005 ABC transporter MKI55_RS07420 PF01261 Xylose isomerase-like TIM barrel MKI55_RS07425 PF00271 Helicase conserved C-terminal domain MKI55_RS07425 PF00270 DEAD/DEAH box helicase MKI55_RS07430 PF01784 NIF3 (NGG1p interacting factor 3) MKI55_RS07435 PF04816 tRNA (adenine(22)-N(1))-methyltransferase MKI55_RS07440 PF00140 Sigma-70 factor, region 1.2 MKI55_RS07440 PF04539 Sigma-70 region 3 MKI55_RS07440 PF04545 Sigma-70, region 4 MKI55_RS07440 PF03979 Sigma-70 factor, region 1.1 MKI55_RS07440 PF04542 Sigma-70 region 2 MKI55_RS07445 PF01807 CHC2 zinc finger MKI55_RS07445 PF08275 DNA primase catalytic core, N-terminal domain MKI55_RS07445 PF00772 DnaB-like helicase N terminal domain MKI55_RS07450 PF03618 Kinase/pyrophosphorylase MKI55_RS07455 PF00571 CBS domain MKI55_RS07455 PF08279 HTH domain MKI55_RS07460 PF03129 Anticodon binding domain MKI55_RS07460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MKI55_RS07465 PF02565 Recombination protein O C terminal MKI55_RS07465 PF11967 Recombination protein O N terminal MKI55_RS07470 PF07650 KH domain MKI55_RS07470 PF01926 50S ribosome-binding GTPase MKI55_RS07475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MKI55_RS07485 PF02130 Uncharacterized protein family UPF0054 MKI55_RS07490 PF02562 PhoH-like protein MKI55_RS07500 PF12127 SigmaW regulon antibacterial MKI55_RS07505 PF01957 NfeD-like C-terminal, partner-binding MKI55_RS07505 PF01972 Serine dehydrogenase proteinase MKI55_RS07510 PF01165 Ribosomal protein S21 MKI55_RS07515 PF04055 Radical SAM superfamily MKI55_RS07515 PF01938 TRAM domain MKI55_RS07515 PF00919 Uncharacterized protein family UPF0004 MKI55_RS07520 PF04452 RNA methyltransferase MKI55_RS07530 PF00684 DnaJ central domain MKI55_RS07530 PF01556 DnaJ C terminal domain MKI55_RS07530 PF00226 DnaJ domain MKI55_RS07535 PF00012 Hsp70 protein MKI55_RS07540 PF01025 GrpE MKI55_RS07545 PF01628 HrcA protein C terminal domain MKI55_RS07550 PF06969 HemN C-terminal domain MKI55_RS07550 PF04055 Radical SAM superfamily MKI55_RS07555 PF00679 Elongation factor G C-terminus MKI55_RS07555 PF00009 Elongation factor Tu GTP binding domain MKI55_RS07555 PF03144 Elongation factor Tu domain 2 MKI55_RS07555 PF06421 GTP-binding protein LepA C-terminus MKI55_RS07560 PF01649 Ribosomal protein S20 MKI55_RS07565 PF06144 DNA polymerase III, delta subunit MKI55_RS07570 PF13567 Domain of unknown function (DUF4131) MKI55_RS07570 PF03772 Competence protein MKI55_RS07570 PF00753 Metallo-beta-lactamase superfamily MKI55_RS07575 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MKI55_RS07580 PF17674 HHH domain MKI55_RS07580 PF00575 S1 RNA binding domain MKI55_RS07580 PF09371 Tex-like protein N-terminal domain MKI55_RS07580 PF16921 Tex protein YqgF-like domain MKI55_RS07585 PF13649 Methyltransferase domain MKI55_RS07595 PF01966 HD domain MKI55_RS07600 PF01467 Cytidylyltransferase-like MKI55_RS07605 PF01985 CRS1 / YhbY (CRM) domain MKI55_RS07610 PF01488 Shikimate / quinate 5-dehydrogenase MKI55_RS07610 PF08501 Shikimate dehydrogenase substrate binding domain MKI55_RS07610 PF18317 Shikimate 5'-dehydrogenase C-terminal domain MKI55_RS07615 PF01926 50S ribosome-binding GTPase MKI55_RS07625 PF01048 Phosphorylase superfamily MKI55_RS07640 PF02661 Fic/DOC family MKI55_RS07640 PF12728 Helix-turn-helix domain MKI55_RS07645 PF01566 Natural resistance-associated macrophage protein MKI55_RS07650 PF03746 LamB/YcsF family MKI55_RS07655 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain MKI55_RS07655 PF00289 Biotin carboxylase, N-terminal domain MKI55_RS07655 PF02785 Biotin carboxylase C-terminal domain MKI55_RS07660 PF00364 Biotin-requiring enzyme MKI55_RS07665 PF02626 Carboxyltransferase domain, subdomain A and B MKI55_RS07670 PF02682 Carboxyltransferase domain, subdomain C and D MKI55_RS07675 PF01272 Transcription elongation factor, GreA/GreB, C-term MKI55_RS07675 PF03449 Transcription elongation factor, N-terminal MKI55_RS07680 PF00485 Phosphoribulokinase / Uridine kinase family MKI55_RS07685 PF16325 Peptidase family U32 C-terminal domain MKI55_RS07685 PF01136 Peptidase family U32 MKI55_RS07690 PF01136 Peptidase family U32 MKI55_RS07700 PF06949 Protein of unknown function (DUF1292) MKI55_RS07705 PF03652 Holliday junction resolvase MKI55_RS07710 PF06135 IreB regulatory phosphoprotein MKI55_RS07715 PF01411 tRNA synthetases class II (A) MKI55_RS07715 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MKI55_RS07715 PF02272 DHHA1 domain MKI55_RS07720 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain MKI55_RS07720 PF13538 UvrD-like helicase C-terminal domain MKI55_RS07720 PF14490 Helix-hairpin-helix containing domain MKI55_RS07735 PF00266 Aminotransferase class-V MKI55_RS07740 PF00296 Luciferase-like monooxygenase MKI55_RS07750 PF05532 CsbD-like MKI55_RS07755 PF02082 Transcriptional regulator MKI55_RS07760 PF16193 AAA C-terminal domain MKI55_RS07760 PF12002 MgsA AAA+ ATPase C terminal MKI55_RS07760 PF05496 Holliday junction DNA helicase RuvB P-loop domain MKI55_RS07765 PF00899 ThiF family MKI55_RS07780 PF02938 GAD domain MKI55_RS07780 PF00152 tRNA synthetases class II (D, K and N) MKI55_RS07780 PF01336 OB-fold nucleic acid binding domain MKI55_RS07785 PF03129 Anticodon binding domain MKI55_RS07785 PF13393 Histidyl-tRNA synthetase MKI55_RS07790 PF01520 N-acetylmuramoyl-L-alanine amidase MKI55_RS07790 PF08239 Bacterial SH3 domain MKI55_RS07795 PF02580 D-Tyr-tRNA(Tyr) deacylase MKI55_RS07800 PF13291 ACT domain MKI55_RS07800 PF04607 Region found in RelA / SpoT proteins MKI55_RS07800 PF02824 TGS domain MKI55_RS07805 PF00156 Phosphoribosyl transferase domain MKI55_RS07810 PF01368 DHH family MKI55_RS07810 PF17768 RecJ OB domain MKI55_RS07810 PF10141 Single-strand DNA-specific exonuclease, C terminal domain MKI55_RS07810 PF02272 DHHA1 domain MKI55_RS07815 PF02355 Protein export membrane protein MKI55_RS07815 PF07549 SecD/SecF GG Motif MKI55_RS07820 PF02699 Preprotein translocase subunit MKI55_RS07825 PF01702 Queuine tRNA-ribosyltransferase MKI55_RS07830 PF02547 Queuosine biosynthesis protein MKI55_RS07835 PF05496 Holliday junction DNA helicase RuvB P-loop domain MKI55_RS07835 PF05491 RuvB C-terminal winged helix domain MKI55_RS07835 PF17864 RuvB AAA lid domain MKI55_RS07840 PF01330 RuvA N terminal domain MKI55_RS07840 PF07499 RuvA, C-terminal domain MKI55_RS07850 PF01926 50S ribosome-binding GTPase MKI55_RS07850 PF01018 GTP1/OBG MKI55_RS07850 PF09269 Domain of unknown function (DUF1967) MKI55_RS07855 PF01016 Ribosomal L27 protein MKI55_RS07860 PF04327 Cysteine protease Prp MKI55_RS07865 PF00829 Ribosomal prokaryotic L21 protein MKI55_RS07900 PF04002 RadC-like JAB domain MKI55_RS07905 PF06750 Bacterial Peptidase A24 N-terminal domain MKI55_RS07905 PF01478 Type IV leader peptidase family MKI55_RS07910 PF02875 Mur ligase family, glutamate ligase domain MKI55_RS07910 PF08245 Mur ligase middle domain MKI55_RS07915 PF08264 Anticodon-binding domain of tRNA MKI55_RS07915 PF00133 tRNA synthetases class I (I, L, M and V) MKI55_RS07915 PF10458 Valyl tRNA synthetase tRNA binding arm MKI55_RS07920 PF03352 Methyladenine glycosylase MKI55_RS07935 PF00202 Aminotransferase class-III MKI55_RS07940 PF00490 Delta-aminolevulinic acid dehydratase MKI55_RS07950 PF03900 Porphobilinogen deaminase, C-terminal domain MKI55_RS07950 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain MKI55_RS07955 PF01578 Cytochrome C assembly protein MKI55_RS07960 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain MKI55_RS07960 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain MKI55_RS07960 PF01488 Shikimate / quinate 5-dehydrogenase MKI55_RS07965 PF01926 50S ribosome-binding GTPase MKI55_RS07970 PF07724 AAA domain (Cdc48 subfamily) MKI55_RS07970 PF10431 C-terminal, D2-small domain, of ClpB protein MKI55_RS07970 PF06689 ClpX C4-type zinc finger MKI55_RS07975 PF05697 Bacterial trigger factor protein (TF) MKI55_RS07975 PF05698 Bacterial trigger factor protein (TF) C-terminus MKI55_RS07975 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase MKI55_RS07995 PF00453 Ribosomal protein L20 MKI55_RS08000 PF01632 Ribosomal protein L35 MKI55_RS08005 PF00707 Translation initiation factor IF-3, C-terminal domain MKI55_RS08005 PF05198 Translation initiation factor IF-3, N-terminal domain MKI55_RS08010 PF00324 Amino acid permease MKI55_RS08015 PF03129 Anticodon binding domain MKI55_RS08015 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain MKI55_RS08015 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) MKI55_RS08015 PF02824 TGS domain MKI55_RS08025 PF07319 Primosomal protein DnaI N-terminus MKI55_RS08025 PF01695 IstB-like ATP binding protein MKI55_RS08035 PF03477 ATP cone domain MKI55_RS08040 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MKI55_RS08040 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain MKI55_RS08045 PF01121 Dephospho-CoA kinase MKI55_RS08050 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain MKI55_RS08050 PF06827 Zinc finger found in FPG and IleRS MKI55_RS08050 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain MKI55_RS08055 PF01367 5'-3' exonuclease, C-terminal SAM fold MKI55_RS08055 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain MKI55_RS08055 PF00476 DNA polymerase family A MKI55_RS08065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS08065 PF00512 His Kinase A (phospho-acceptor) domain MKI55_RS08065 PF00989 PAS fold MKI55_RS08065 PF16736 Single Cache-like MKI55_RS08070 PF00072 Response regulator receiver domain MKI55_RS08070 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS08075 PF00180 Isocitrate/isopropylmalate dehydrogenase MKI55_RS08080 PF00285 Citrate synthase, C-terminal domain MKI55_RS08085 PF00324 Amino acid permease MKI55_RS08090 PF02887 Pyruvate kinase, alpha/beta domain MKI55_RS08090 PF00391 PEP-utilising enzyme, mobile domain MKI55_RS08090 PF00224 Pyruvate kinase, barrel domain MKI55_RS08095 PF00365 Phosphofructokinase MKI55_RS08100 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit MKI55_RS08105 PF01039 Carboxyl transferase domain MKI55_RS08105 PF17848 Acetyl-coA carboxylase zinc finger domain MKI55_RS08110 PF00390 Malic enzyme, N-terminal domain MKI55_RS08110 PF03949 Malic enzyme, NAD binding domain MKI55_RS08115 PF07733 Bacterial DNA polymerase III alpha NTPase domain MKI55_RS08115 PF17657 Bacterial DNA polymerase III alpha subunit finger domain MKI55_RS08115 PF02811 PHP domain MKI55_RS08115 PF01336 OB-fold nucleic acid binding domain MKI55_RS08115 PF14579 Helix-hairpin-helix motif MKI55_RS08120 PF01368 DHH family MKI55_RS08120 PF02272 DHHA1 domain MKI55_RS08125 PF03061 Thioesterase superfamily MKI55_RS08125 PF00571 CBS domain MKI55_RS08125 PF07085 DRTGG domain MKI55_RS08125 PF00392 Bacterial regulatory proteins, gntR family MKI55_RS08140 PF01321 Creatinase/Prolidase N-terminal domain MKI55_RS08140 PF00557 Metallopeptidase family M24 MKI55_RS08150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain MKI55_RS08150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain MKI55_RS08155 PF00582 Universal stress protein family MKI55_RS08160 PF00871 Acetokinase family MKI55_RS08165 PF02384 N-6 DNA Methylase MKI55_RS08170 PF08534 Redoxin MKI55_RS08175 PF01925 Sulfite exporter TauE/SafE MKI55_RS08180 PF02926 THUMP domain MKI55_RS08180 PF02568 Thiamine biosynthesis protein (ThiI) MKI55_RS08185 PF00266 Aminotransferase class-V MKI55_RS08195 PF06160 Septation ring formation regulator, EzrA MKI55_RS08200 PF13185 GAF domain MKI55_RS08205 PF00163 Ribosomal protein S4/S9 N-terminal domain MKI55_RS08205 PF01479 S4 domain MKI55_RS08210 PF03009 Glycerophosphoryl diester phosphodiesterase family MKI55_RS08215 PF02566 OsmC-like protein MKI55_RS08220 PF00266 Aminotransferase class-V MKI55_RS08225 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKI55_RS08225 PF01842 ACT domain MKI55_RS08225 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKI55_RS08240 PF00367 phosphotransferase system, EIIB MKI55_RS08240 PF02378 Phosphotransferase system, EIIC MKI55_RS08245 PF01553 Acyltransferase MKI55_RS08250 PF13180 PDZ domain MKI55_RS08255 PF01479 S4 domain MKI55_RS08255 PF00579 tRNA synthetases class I (W and Y) MKI55_RS08260 PF00912 Transglycosylase MKI55_RS08260 PF00905 Penicillin binding protein transpeptidase domain MKI55_RS08270 PF05031 Iron Transport-associated domain MKI55_RS08270 PF04650 YSIRK type signal peptide MKI55_RS08280 PF01268 Formate--tetrahydrofolate ligase MKI55_RS08285 PF00501 AMP-binding enzyme MKI55_RS08285 PF13193 AMP-binding enzyme C-terminal domain MKI55_RS08290 PF00583 Acetyltransferase (GNAT) family MKI55_RS08295 PF00850 Histone deacetylase domain MKI55_RS08300 PF00356 Bacterial regulatory proteins, lacI family MKI55_RS08310 PF01817 Chorismate mutase type II MKI55_RS08310 PF00793 DAHP synthetase I family MKI55_RS08325 PF06103 Bacterial protein of unknown function (DUF948) MKI55_RS08330 PF01225 Mur ligase family, catalytic domain MKI55_RS08330 PF02875 Mur ligase family, glutamate ligase domain MKI55_RS08330 PF08245 Mur ligase middle domain MKI55_RS08335 PF01580 FtsK/SpoIIIE family MKI55_RS08335 PF09397 Ftsk gamma domain MKI55_RS08335 PF17854 FtsK alpha domain MKI55_RS08340 PF14794 Domain of unknown function (DUF4479) MKI55_RS08340 PF01588 Putative tRNA binding domain MKI55_RS08345 PF07285 Protein of unknown function (DUF1444) MKI55_RS08350 PF00085 Thioredoxin MKI55_RS08355 PF05343 M42 glutamyl aminopeptidase MKI55_RS08365 PF00753 Metallo-beta-lactamase superfamily MKI55_RS08370 PF02390 Putative methyltransferase MKI55_RS08375 PF01636 Phosphotransferase enzyme family MKI55_RS08380 PF01063 Amino-transferase class IV MKI55_RS08385 PF01546 Peptidase family M20/M25/M40 MKI55_RS08395 PF01479 S4 domain MKI55_RS08395 PF00849 RNA pseudouridylate synthase MKI55_RS08400 PF01943 Polysaccharide biosynthesis protein MKI55_RS08400 PF14667 Polysaccharide biosynthesis C-terminal domain MKI55_RS08410 PF04650 YSIRK type signal peptide MKI55_RS08410 PF01468 GA module MKI55_RS08410 PF07564 Domain of Unknown Function (DUF1542) MKI55_RS08420 PF09334 tRNA synthetases class I (M) MKI55_RS08420 PF08264 Anticodon-binding domain of tRNA MKI55_RS08420 PF00133 tRNA synthetases class I (I, L, M and V) MKI55_RS08420 PF13603 Leucyl-tRNA synthetase, Domain 2 MKI55_RS08425 PF07690 Major Facilitator Superfamily MKI55_RS08430 PF04055 Radical SAM superfamily MKI55_RS08430 PF16199 Radical_SAM C-terminal domain MKI55_RS08435 PF06962 Putative rRNA methylase MKI55_RS08440 PF01047 MarR family MKI55_RS08445 PF12146 Serine aminopeptidase, S33 MKI55_RS08455 PF01619 Proline dehydrogenase MKI55_RS08460 PF00885 6,7-dimethyl-8-ribityllumazine synthase MKI55_RS08465 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase MKI55_RS08465 PF00925 GTP cyclohydrolase II MKI55_RS08470 PF00677 Lumazine binding domain MKI55_RS08475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region MKI55_RS08475 PF01872 RibD C-terminal domain MKI55_RS08485 PF01022 Bacterial regulatory protein, arsR family MKI55_RS08490 PF02040 Arsenical pump membrane protein MKI55_RS08495 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MKI55_RS08495 PF13457 GW (Gly-Tryp) dipeptide domain MKI55_RS08505 PF04542 Sigma-70 region 2 MKI55_RS08525 PF00923 Transaldolase/Fructose-6-phosphate aldolase MKI55_RS08535 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MKI55_RS08540 PF02537 CrcB-like protein, Camphor Resistance (CrcB) MKI55_RS08550 PF00248 Aldo/keto reductase family MKI55_RS08560 PF02773 S-adenosylmethionine synthetase, C-terminal domain MKI55_RS08560 PF02772 S-adenosylmethionine synthetase, central domain MKI55_RS08560 PF00438 S-adenosylmethionine synthetase, N-terminal domain MKI55_RS08565 PF01293 Phosphoenolpyruvate carboxykinase MKI55_RS08570 PF00326 Prolyl oligopeptidase family MKI55_RS08575 PF00293 NUDIX domain MKI55_RS08575 PF09297 NADH pyrophosphatase zinc ribbon domain MKI55_RS08580 PF01809 Putative membrane protein insertion efficiency factor MKI55_RS08590 PF13193 AMP-binding enzyme C-terminal domain MKI55_RS08590 PF00501 AMP-binding enzyme MKI55_RS08645 PF00665 Integrase core domain MKI55_RS08645 PF02796 Helix-turn-helix domain of resolvase MKI55_RS08655 PF12161 HsdM N-terminal domain MKI55_RS08655 PF02384 N-6 DNA Methylase MKI55_RS08675 PF00089 Trypsin MKI55_RS08680 PF00089 Trypsin MKI55_RS08685 PF00089 Trypsin MKI55_RS08710 PF07968 Leukocidin/Hemolysin toxin family MKI55_RS08715 PF07968 Leukocidin/Hemolysin toxin family MKI55_RS08745 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS08760 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS08765 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS08770 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain MKI55_RS08820 PF01593 Flavin containing amine oxidoreductase MKI55_RS08825 PF00762 Ferrochelatase MKI55_RS08830 PF01208 Uroporphyrinogen decarboxylase (URO-D) MKI55_RS08850 PF00005 ABC transporter MKI55_RS08855 PF01230 HIT domain MKI55_RS08870 PF00639 PPIC-type PPIASE domain MKI55_RS08875 PF01966 HD domain MKI55_RS08885 PF00149 Calcineurin-like phosphoesterase MKI55_RS08895 PF06133 Control of competence regulator ComK, YlbF/YmcA MKI55_RS08900 PF04286 Protein of unknown function (DUF445) MKI55_RS08910 PF00196 Bacterial regulatory proteins, luxR family MKI55_RS08910 PF00072 Response regulator receiver domain MKI55_RS08915 PF07730 Histidine kinase MKI55_RS08915 PF13185 GAF domain MKI55_RS08920 PF00849 RNA pseudouridylate synthase MKI55_RS08920 PF01479 S4 domain MKI55_RS08925 PF10415 Fumarase C C-terminus MKI55_RS08925 PF00206 Lyase MKI55_RS08945 PF00588 SpoU rRNA Methylase family MKI55_RS08950 PF08331 Domain of unknown function (DUF1730) MKI55_RS08955 PF00005 ABC transporter MKI55_RS08960 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS09135 PF01475 Ferric uptake regulator family MKI55_RS09140 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKI55_RS09140 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKI55_RS09145 PF00578 AhpC/TSA family MKI55_RS09150 PF00202 Aminotransferase class-III MKI55_RS09155 PF06081 Aromatic acid exporter family member 1 MKI55_RS09165 PF00005 ABC transporter MKI55_RS09165 PF00664 ABC transporter transmembrane region MKI55_RS09170 PF04167 Protein of unknown function (DUF402) MKI55_RS09175 PF00633 Helix-hairpin-helix motif MKI55_RS09175 PF00730 HhH-GPD superfamily base excision DNA repair protein MKI55_RS09175 PF14815 NUDIX domain MKI55_RS09180 PF04307 LexA-binding, inner membrane-associated putative hydrolase MKI55_RS09190 PF00005 ABC transporter MKI55_RS09190 PF01476 LysM domain MKI55_RS09200 PF02631 RecX family MKI55_RS09205 PF00912 Transglycosylase MKI55_RS09210 PF01965 DJ-1/PfpI family MKI55_RS09235 PF01510 N-acetylmuramoyl-L-alanine amidase MKI55_RS09235 PF05257 CHAP domain MKI55_RS09235 PF08460 Bacterial SH3 domain MKI55_RS09255 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MKI55_RS09255 PF13457 GW (Gly-Tryp) dipeptide domain MKI55_RS09445 PF01695 IstB-like ATP binding protein MKI55_RS09460 PF00436 Single-strand binding protein family MKI55_RS09555 PF02899 Phage integrase, N-terminal SAM-like domain MKI55_RS09555 PF00589 Phage integrase family MKI55_RS09560 PF04055 Radical SAM superfamily MKI55_RS09560 PF08756 YfkB-like domain MKI55_RS09565 PF03061 Thioesterase superfamily MKI55_RS09570 PF02073 Thermophilic metalloprotease (M29) MKI55_RS09575 PF06569 Protein of unknown function (DUF1128) MKI55_RS09580 PF01451 Low molecular weight phosphotyrosine protein phosphatase MKI55_RS09590 PF03631 Virulence factor BrkB MKI55_RS09595 PF00072 Response regulator receiver domain MKI55_RS09595 PF00196 Bacterial regulatory proteins, luxR family MKI55_RS09600 PF07730 Histidine kinase MKI55_RS09600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS09615 PF00557 Metallopeptidase family M24 MKI55_RS09620 PF06081 Aromatic acid exporter family member 1 MKI55_RS09635 PF07685 CobB/CobQ-like glutamine amidotransferase domain MKI55_RS09640 PF08353 Domain of unknown function (DUF1727) MKI55_RS09640 PF08245 Mur ligase middle domain MKI55_RS09645 PF00210 Ferritin-like domain MKI55_RS09660 PF00817 impB/mucB/samB family MKI55_RS09660 PF11799 impB/mucB/samB family C-terminal domain MKI55_RS09670 PF05958 tRNA (Uracil-5-)-methyltransferase MKI55_RS09675 PF00781 Diacylglycerol kinase catalytic domain MKI55_RS09685 PF02934 GatB/GatE catalytic domain MKI55_RS09685 PF02637 GatB domain MKI55_RS09690 PF01425 Amidase MKI55_RS09695 PF02686 Glu-tRNAGln amidotransferase C subunit MKI55_RS09700 PF00474 Sodium:solute symporter family MKI55_RS09705 PF07537 CamS sex pheromone cAM373 precursor MKI55_RS09710 PF00533 BRCA1 C Terminus (BRCT) domain MKI55_RS09710 PF03120 NAD-dependent DNA ligase OB-fold domain MKI55_RS09710 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MKI55_RS09710 PF12826 Helix-hairpin-helix motif MKI55_RS09710 PF01653 NAD-dependent DNA ligase adenylation domain MKI55_RS09715 PF00580 UvrD/REP helicase N-terminal domain MKI55_RS09715 PF13361 UvrD-like helicase C-terminal domain MKI55_RS09720 PF01884 PcrB family MKI55_RS09725 PF01371 Trp repressor protein MKI55_RS09730 PF00206 Lyase MKI55_RS09730 PF10397 Adenylosuccinate lyase C-terminus MKI55_RS09735 PF14731 Staphopain proregion MKI55_RS09735 PF05543 Staphopain peptidase C47 MKI55_RS09745 PF14044 NETI protein MKI55_RS09750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) MKI55_RS09755 PF02540 NAD synthase MKI55_RS09760 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family MKI55_RS09760 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain MKI55_RS09760 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MKI55_RS09765 PF02898 Nitric oxide synthase, oxygenase domain MKI55_RS09770 PF00800 Prephenate dehydratase MKI55_RS09770 PF01842 ACT domain MKI55_RS09790 PF00857 Isochorismatase family MKI55_RS09795 PF02833 DHHA2 domain MKI55_RS09795 PF01368 DHH family MKI55_RS09805 PF00171 Aldehyde dehydrogenase family MKI55_RS09810 PF10282 Lactonase, 7-bladed beta-propeller MKI55_RS09860 PF00005 ABC transporter MKI55_RS09870 PF00005 ABC transporter MKI55_RS09875 PF00392 Bacterial regulatory proteins, gntR family MKI55_RS09895 PF03642 MAP domain MKI55_RS09900 PF03642 MAP domain MKI55_RS09905 PF03372 Endonuclease/Exonuclease/phosphatase family MKI55_RS09910 PF07968 Leukocidin/Hemolysin toxin family MKI55_RS09915 PF07968 Leukocidin/Hemolysin toxin family MKI55_RS09920 PF01546 Peptidase family M20/M25/M40 MKI55_RS09920 PF07687 Peptidase dimerisation domain MKI55_RS09925 PF02386 Cation transport protein MKI55_RS09970 PF10668 Phage terminase small subunit MKI55_RS09970 PF03592 Terminase small subunit MKI55_RS10055 PF00589 Phage integrase family MKI55_RS10055 PF14659 Phage integrase, N-terminal SAM-like domain MKI55_RS10060 PF00118 TCP-1/cpn60 chaperonin family MKI55_RS10065 PF00166 Chaperonin 10 Kd subunit MKI55_RS10070 PF02517 CPBP intramembrane metalloprotease MKI55_RS10085 PF00795 Carbon-nitrogen hydrolase MKI55_RS10090 PF05372 Delta lysin family MKI55_RS10095 PF04647 Accessory gene regulator B MKI55_RS10110 PF04397 LytTr DNA-binding domain MKI55_RS10110 PF00072 Response regulator receiver domain MKI55_RS10120 PF00294 pfkB family carbohydrate kinase MKI55_RS10125 PF08244 Glycosyl hydrolases family 32 C terminal MKI55_RS10125 PF00251 Glycosyl hydrolases family 32 N-terminal domain MKI55_RS10130 PF00356 Bacterial regulatory proteins, lacI family MKI55_RS10130 PF13407 Periplasmic binding protein domain MKI55_RS10135 PF00909 Ammonium Transporter Family MKI55_RS10140 PF01206 Sulfurtransferase TusA MKI55_RS10145 PF04143 Sulphur transport MKI55_RS10150 PF06971 Putative DNA-binding protein N-terminus MKI55_RS10150 PF02629 CoA binding domain MKI55_RS10155 PF00005 ABC transporter MKI55_RS10155 PF16326 ABC transporter C-terminal domain MKI55_RS10155 PF12848 ABC transporter MKI55_RS10165 PF01624 MutS domain I MKI55_RS10165 PF05188 MutS domain II MKI55_RS10165 PF05192 MutS domain III MKI55_RS10165 PF05190 MutS family domain IV MKI55_RS10165 PF00488 MutS domain V MKI55_RS10170 PF00814 Glycoprotease family MKI55_RS10175 PF00583 Acetyltransferase (GNAT) family MKI55_RS10180 PF00814 Glycoprotease family MKI55_RS10185 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE MKI55_RS10195 PF00920 Dehydratase family MKI55_RS10200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKI55_RS10200 PF00205 Thiamine pyrophosphate enzyme, central domain MKI55_RS10200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKI55_RS10210 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain MKI55_RS10210 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain MKI55_RS10215 PF00682 HMGL-like MKI55_RS10215 PF08502 LeuA allosteric (dimerisation) domain MKI55_RS10220 PF00180 Isocitrate/isopropylmalate dehydrogenase MKI55_RS10225 PF00330 Aconitase family (aconitate hydratase) MKI55_RS10230 PF00694 Aconitase C-terminal domain MKI55_RS10235 PF00585 C-terminal regulatory domain of Threonine dehydratase MKI55_RS10235 PF00291 Pyridoxal-phosphate dependent enzyme MKI55_RS10265 PF17283 SprT-like zinc ribbon domain MKI55_RS10265 PF10263 SprT-like family MKI55_RS10270 PF17674 HHH domain MKI55_RS10270 PF16921 Tex protein YqgF-like domain MKI55_RS10270 PF09371 Tex-like protein N-terminal domain MKI55_RS10270 PF00575 S1 RNA binding domain MKI55_RS10275 PF04545 Sigma-70, region 4 MKI55_RS10275 PF04542 Sigma-70 region 2 MKI55_RS10275 PF04539 Sigma-70 region 3 MKI55_RS10280 PF13581 Histidine kinase-like ATPase domain MKI55_RS10285 PF01740 STAS domain MKI55_RS10290 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain MKI55_RS10290 PF07228 Stage II sporulation protein E (SpoIIE) MKI55_RS10295 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system MKI55_RS10305 PF00842 Alanine racemase, C-terminal domain MKI55_RS10305 PF01168 Alanine racemase, N-terminal domain MKI55_RS10310 PF01648 4'-phosphopantetheinyl transferase superfamily MKI55_RS10320 PF03703 Bacterial PH domain MKI55_RS10330 PF02669 K+-transporting ATPase, c chain MKI55_RS10340 PF03814 Potassium-transporting ATPase A subunit MKI55_RS10350 PF02702 Osmosensitive K+ channel His kinase sensor domain MKI55_RS10350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS10350 PF13493 Domain of unknown function (DUF4118) MKI55_RS10350 PF00512 His Kinase A (phospho-acceptor) domain MKI55_RS10355 PF00072 Response regulator receiver domain MKI55_RS10355 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS10370 PF00270 DEAD/DEAH box helicase MKI55_RS10370 PF00271 Helicase conserved C-terminal domain MKI55_RS10375 PF01225 Mur ligase family, catalytic domain MKI55_RS10375 PF02875 Mur ligase family, glutamate ligase domain MKI55_RS10375 PF08245 Mur ligase middle domain MKI55_RS10380 PF07478 D-ala D-ala ligase C-terminus MKI55_RS10380 PF01820 D-ala D-ala ligase N-terminus MKI55_RS10385 PF01098 Cell cycle protein MKI55_RS10400 PF02583 Metal-sensitive transcriptional repressor MKI55_RS10405 PF13396 Phospholipase_D-nuclease N-terminal MKI55_RS10405 PF13091 PLD-like domain MKI55_RS10410 PF01966 HD domain MKI55_RS10415 PF02096 60Kd inner membrane protein MKI55_RS10420 PF02581 Thiamine monophosphate synthase MKI55_RS10425 PF02110 Hydroxyethylthiazole kinase family MKI55_RS10430 PF08543 Phosphomethylpyrimidine kinase MKI55_RS10435 PF03070 TENA/THI-4/PQQC family MKI55_RS10440 PF06737 Transglycosylase-like domain MKI55_RS10445 PF00436 Single-strand binding protein family MKI55_RS10455 PF07977 FabA-like domain MKI55_RS10460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MKI55_RS10475 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain MKI55_RS10475 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain MKI55_RS10480 PF02874 ATP synthase alpha/beta family, beta-barrel domain MKI55_RS10480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKI55_RS10485 PF00231 ATP synthase MKI55_RS10490 PF00306 ATP synthase alpha/beta chain, C terminal domain MKI55_RS10490 PF02874 ATP synthase alpha/beta family, beta-barrel domain MKI55_RS10490 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKI55_RS10495 PF00213 ATP synthase delta (OSCP) subunit MKI55_RS10500 PF00430 ATP synthase B/B' CF(0) MKI55_RS10505 PF00137 ATP synthase subunit C MKI55_RS10510 PF00119 ATP synthase A chain MKI55_RS10520 PF02350 UDP-N-acetylglucosamine 2-epimerase MKI55_RS10530 PF00464 Serine hydroxymethyltransferase MKI55_RS10535 PF04260 Protein of unknown function (DUF436) MKI55_RS10540 PF01451 Low molecular weight phosphotyrosine protein phosphatase MKI55_RS10545 PF03481 Putative GTP-binding controlling metal-binding MKI55_RS10545 PF01300 Telomere recombination MKI55_RS10550 PF05175 Methyltransferase small domain MKI55_RS10550 PF17827 PrmC N-terminal domain MKI55_RS10555 PF00472 RF-1 domain MKI55_RS10555 PF03462 PCRF domain MKI55_RS10560 PF00265 Thymidine kinase MKI55_RS10565 PF01197 Ribosomal protein L31 MKI55_RS10570 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain MKI55_RS10570 PF07498 Rho termination factor, N-terminal domain MKI55_RS10570 PF07497 Rho termination factor, RNA-binding domain MKI55_RS10575 PF00171 Aldehyde dehydrogenase family MKI55_RS10585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) MKI55_RS10590 PF01116 Fructose-bisphosphate aldolase class-II MKI55_RS10600 PF06418 CTP synthase N-terminus MKI55_RS10600 PF00117 Glutamine amidotransferase class-I MKI55_RS10605 PF05066 HB1, ASXL, restriction endonuclease HTH domain MKI55_RS10615 PF03630 Fumble MKI55_RS10635 PF02664 S-Ribosylhomocysteinase (LuxS) MKI55_RS10645 PF02885 Glycosyl transferase family, helical bundle domain MKI55_RS10645 PF00591 Glycosyl transferase family, a/b domain MKI55_RS10645 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain MKI55_RS10650 PF01791 DeoC/LacD family aldolase MKI55_RS10655 PF01048 Phosphorylase superfamily MKI55_RS10660 PF00210 Ferritin-like domain MKI55_RS10680 PF01238 Phosphomannose isomerase type I MKI55_RS10685 PF13460 NAD(P)H-binding MKI55_RS10690 PF01022 Bacterial regulatory protein, arsR family MKI55_RS10695 PF16916 Dimerisation domain of Zinc Transporter MKI55_RS10695 PF01545 Cation efflux family MKI55_RS10725 PF00005 ABC transporter MKI55_RS10730 PF01380 SIS domain MKI55_RS10735 PF02378 Phosphotransferase system, EIIC MKI55_RS10735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKI55_RS10740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKI55_RS10740 PF05043 Mga helix-turn-helix domain MKI55_RS10740 PF00874 PRD domain MKI55_RS10740 PF08279 HTH domain MKI55_RS10740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKI55_RS10745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKI55_RS10750 PF01232 Mannitol dehydrogenase Rossmann domain MKI55_RS10750 PF08125 Mannitol dehydrogenase C-terminal domain MKI55_RS10755 PF07564 Domain of Unknown Function (DUF1542) MKI55_RS10755 PF01468 GA module MKI55_RS10760 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MKI55_RS10760 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MKI55_RS10760 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MKI55_RS10760 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MKI55_RS10770 PF02457 DisA bacterial checkpoint controller nucleotide-binding MKI55_RS10775 PF00491 Arginase family MKI55_RS10840 PF10609 NUBPL iron-transfer P-loop NTPase MKI55_RS10845 PF07690 Major Facilitator Superfamily MKI55_RS10850 PF17080 Multidrug Resistance efflux pump MKI55_RS10855 PF07690 Major Facilitator Superfamily MKI55_RS10860 PF03006 Haemolysin-III related MKI55_RS10865 PF01704 UTP--glucose-1-phosphate uridylyltransferase MKI55_RS10870 PF04307 LexA-binding, inner membrane-associated putative hydrolase MKI55_RS10880 PF07670 Nucleoside recognition MKI55_RS10885 PF01032 FecCD transport family MKI55_RS10890 PF01032 FecCD transport family MKI55_RS10895 PF01497 Periplasmic binding protein MKI55_RS10905 PF01168 Alanine racemase, N-terminal domain MKI55_RS10910 PF04183 IucA / IucC family MKI55_RS10910 PF06276 Ferric iron reductase FhuF-like transporter MKI55_RS10915 PF05977 Transmembrane secretion effector MKI55_RS10925 PF03780 Asp23 family, cell envelope-related function MKI55_RS10940 PF02028 BCCT, betaine/carnitine/choline family transporter MKI55_RS10945 PF00107 Zinc-binding dehydrogenase MKI55_RS10945 PF08240 Alcohol dehydrogenase GroES-like domain MKI55_RS10950 PF00107 Zinc-binding dehydrogenase MKI55_RS10950 PF16884 N-terminal domain of oxidoreductase MKI55_RS10960 PF00232 Glycosyl hydrolase family 1 MKI55_RS10965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKI55_RS10965 PF02378 Phosphotransferase system, EIIC MKI55_RS10970 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit MKI55_RS10975 PF01791 DeoC/LacD family aldolase MKI55_RS10980 PF00294 pfkB family carbohydrate kinase MKI55_RS10985 PF02502 Ribose/Galactose Isomerase MKI55_RS10990 PF02502 Ribose/Galactose Isomerase MKI55_RS10995 PF00455 DeoR C terminal sensor domain MKI55_RS10995 PF08220 DeoR-like helix-turn-helix domain MKI55_RS11000 PF02146 Sir2 family MKI55_RS11015 PF00248 Aldo/keto reductase family MKI55_RS11020 PF13411 MerR HTH family regulatory protein MKI55_RS11030 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain MKI55_RS11030 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain MKI55_RS11030 PF02278 Polysaccharide lyase family 8, super-sandwich domain MKI55_RS11040 PF05116 Sucrose-6F-phosphate phosphohydrolase MKI55_RS11050 PF03306 Alpha-acetolactate decarboxylase MKI55_RS11055 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKI55_RS11055 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKI55_RS11055 PF00205 Thiamine pyrophosphate enzyme, central domain MKI55_RS11070 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) MKI55_RS11100 PF00380 Ribosomal protein S9/S16 MKI55_RS11105 PF00572 Ribosomal protein L13 MKI55_RS11110 PF01416 tRNA pseudouridine synthase MKI55_RS11115 PF02361 Cobalt transport protein MKI55_RS11120 PF00005 ABC transporter MKI55_RS11125 PF00005 ABC transporter MKI55_RS11130 PF01196 Ribosomal protein L17 MKI55_RS11135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain MKI55_RS11135 PF01000 RNA polymerase Rpb3/RpoA insert domain MKI55_RS11135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain MKI55_RS11140 PF00411 Ribosomal protein S11 MKI55_RS11145 PF00416 Ribosomal protein S13/S18 MKI55_RS11150 PF00444 Ribosomal protein L36 MKI55_RS11155 PF01176 Translation initiation factor 1A / IF-1 MKI55_RS11160 PF05191 Adenylate kinase, active site lid MKI55_RS11165 PF00344 SecY translocase MKI55_RS11170 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A MKI55_RS11175 PF00327 Ribosomal protein L30p/L7e MKI55_RS11180 PF00333 Ribosomal protein S5, N-terminal domain MKI55_RS11180 PF03719 Ribosomal protein S5, C-terminal domain MKI55_RS11185 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast MKI55_RS11190 PF00347 Ribosomal protein L6 MKI55_RS11195 PF00410 Ribosomal protein S8 MKI55_RS11200 PF00253 Ribosomal protein S14p/S29e MKI55_RS11205 PF00281 Ribosomal protein L5 MKI55_RS11205 PF00673 ribosomal L5P family C-terminus MKI55_RS11210 PF00467 KOW motif MKI55_RS11210 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 MKI55_RS11215 PF00238 Ribosomal protein L14p/L23e MKI55_RS11220 PF00366 Ribosomal protein S17 MKI55_RS11225 PF00831 Ribosomal L29 protein MKI55_RS11230 PF00252 Ribosomal protein L16p/L10e MKI55_RS11235 PF07650 KH domain MKI55_RS11235 PF00189 Ribosomal protein S3, C-terminal domain MKI55_RS11240 PF00237 Ribosomal protein L22p/L17e MKI55_RS11245 PF00203 Ribosomal protein S19 MKI55_RS11250 PF00181 Ribosomal Proteins L2, RNA binding domain MKI55_RS11250 PF03947 Ribosomal Proteins L2, C-terminal domain MKI55_RS11255 PF00276 Ribosomal protein L23 MKI55_RS11260 PF00573 Ribosomal protein L4/L1 family MKI55_RS11265 PF00297 Ribosomal protein L3 MKI55_RS11270 PF00338 Ribosomal protein S10p/S20e MKI55_RS11280 PF00860 Permease family MKI55_RS11285 PF01751 Toprim domain MKI55_RS11285 PF01131 DNA topoisomerase MKI55_RS11300 PF06800 Sugar transport protein MKI55_RS11325 PF00873 AcrB/AcrD/AcrF family MKI55_RS11330 PF02388 FemAB family MKI55_RS11345 PF01047 MarR family MKI55_RS11355 PF01047 MarR family MKI55_RS11365 PF06463 Molybdenum Cofactor Synthesis C MKI55_RS11365 PF04055 Radical SAM superfamily MKI55_RS11370 PF12804 MobA-like NTP transferase domain MKI55_RS11375 PF02597 ThiS family MKI55_RS11380 PF02391 MoaE protein MKI55_RS11385 PF03205 Molybdopterin guanine dinucleotide synthesis protein B MKI55_RS11390 PF03454 MoeA C-terminal region (domain IV) MKI55_RS11390 PF03453 MoeA N-terminal region (domain I and II) MKI55_RS11390 PF00994 Probable molybdopterin binding domain MKI55_RS11395 PF01967 MoaC family MKI55_RS11400 PF00994 Probable molybdopterin binding domain MKI55_RS11405 PF00899 ThiF family MKI55_RS11410 PF03459 TOBE domain MKI55_RS11410 PF00005 ABC transporter MKI55_RS11415 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS11425 PF02634 FdhD/NarQ family MKI55_RS11435 PF02632 BioY family MKI55_RS11440 PF01156 Inosine-uridine preferring nucleoside hydrolase MKI55_RS11450 PF08028 Acyl-CoA dehydrogenase, C-terminal domain MKI55_RS11450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain MKI55_RS11450 PF02770 Acyl-CoA dehydrogenase, middle domain MKI55_RS11455 PF03253 Urea transporter MKI55_RS11460 PF00547 Urease, gamma subunit MKI55_RS11465 PF00699 Urease beta subunit MKI55_RS11470 PF00449 Urease alpha-subunit, N-terminal domain MKI55_RS11470 PF01979 Amidohydrolase family MKI55_RS11475 PF02814 UreE urease accessory protein, N-terminal domain MKI55_RS11475 PF05194 UreE urease accessory protein, C-terminal domain MKI55_RS11480 PF01730 UreF MKI55_RS11485 PF02492 CobW/HypB/UreG, nucleotide-binding domain MKI55_RS11490 PF01774 UreD urease accessory protein MKI55_RS11515 PF05257 CHAP domain MKI55_RS11525 PF03553 Na+/H+ antiporter family MKI55_RS11530 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain MKI55_RS11530 PF02558 Ketopantoate reductase PanE/ApbA MKI55_RS11540 PF05257 CHAP domain MKI55_RS11545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKI55_RS11545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKI55_RS11550 PF01494 FAD binding domain MKI55_RS11555 PF13457 GW (Gly-Tryp) dipeptide domain MKI55_RS11555 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MKI55_RS11570 PF01568 Molydopterin dinucleotide binding domain MKI55_RS11570 PF00384 Molybdopterin oxidoreductase MKI55_RS11570 PF04879 Molybdopterin oxidoreductase Fe4S4 domain MKI55_RS11570 PF12838 4Fe-4S dicluster domain MKI55_RS11570 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MKI55_RS11575 PF03816 Cell envelope-related transcriptional attenuator domain MKI55_RS11590 PF02517 CPBP intramembrane metalloprotease MKI55_RS11605 PF00324 Amino acid permease MKI55_RS11625 PF13419 Haloacid dehalogenase-like hydrolase MKI55_RS11630 PF01758 Sodium Bile acid symporter family MKI55_RS11640 PF00367 phosphotransferase system, EIIB MKI55_RS11640 PF02378 Phosphotransferase system, EIIC MKI55_RS11645 PF01418 Helix-turn-helix domain, rpiR family MKI55_RS11645 PF01380 SIS domain MKI55_RS11670 PF07687 Peptidase dimerisation domain MKI55_RS11670 PF01546 Peptidase family M20/M25/M40 MKI55_RS11675 PF01979 Amidohydrolase family MKI55_RS11680 PF01175 Urocanase Rossmann-like domain MKI55_RS11680 PF17392 Urocanase C-terminal domain MKI55_RS11680 PF17391 Urocanase N-terminal domain MKI55_RS11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKI55_RS11685 PF03466 LysR substrate binding domain MKI55_RS11690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKI55_RS11695 PF00491 Arginase family MKI55_RS11705 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) MKI55_RS11710 PF03473 MOSC domain MKI55_RS11710 PF03475 3-alpha domain MKI55_RS11720 PF02694 Uncharacterised BCR, YnfA/UPF0060 family MKI55_RS11740 PF05656 Protein of unknown function (DUF805) MKI55_RS11745 PF02245 Methylpurine-DNA glycosylase (MPG) MKI55_RS11750 PF03616 Sodium/glutamate symporter MKI55_RS11755 PF01070 FMN-dependent dehydrogenase MKI55_RS11760 PF01544 CorA-like Mg2+ transporter protein MKI55_RS11775 PF00934 PE family MKI55_RS11775 PF07859 alpha/beta hydrolase fold MKI55_RS11785 PF07690 Major Facilitator Superfamily MKI55_RS11800 PF07690 Major Facilitator Superfamily MKI55_RS11815 PF12802 MarR family MKI55_RS11825 PF00005 ABC transporter MKI55_RS11830 PF02687 FtsX-like permease family MKI55_RS11835 PF00072 Response regulator receiver domain MKI55_RS11835 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS11840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS11840 PF00512 His Kinase A (phospho-acceptor) domain MKI55_RS11840 PF00672 HAMP domain MKI55_RS11845 PF04397 LytTr DNA-binding domain MKI55_RS11855 PF06039 Malate:quinone oxidoreductase (Mqo) MKI55_RS11860 PF02652 L-lactate permease MKI55_RS11865 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase MKI55_RS11875 PF13673 Acetyltransferase (GNAT) domain MKI55_RS11880 PF08240 Alcohol dehydrogenase GroES-like domain MKI55_RS11880 PF00107 Zinc-binding dehydrogenase MKI55_RS11890 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS11920 PF02378 Phosphotransferase system, EIIC MKI55_RS11920 PF00367 phosphotransferase system, EIIB MKI55_RS11935 PF16242 Pyridoxamine 5'-phosphate oxidase like MKI55_RS11945 PF00375 Sodium:dicarboxylate symporter family MKI55_RS11955 PF01047 MarR family MKI55_RS11960 PF00011 Hsp20/alpha crystallin family MKI55_RS11965 PF07690 Major Facilitator Superfamily MKI55_RS11975 PF13411 MerR HTH family regulatory protein MKI55_RS11975 PF07739 TipAS antibiotic-recognition domain MKI55_RS11980 PF00072 Response regulator receiver domain MKI55_RS11980 PF00196 Bacterial regulatory proteins, luxR family MKI55_RS11985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS11985 PF07730 Histidine kinase MKI55_RS11995 PF02665 Nitrate reductase gamma subunit MKI55_RS12005 PF13247 4Fe-4S dicluster domain MKI55_RS12005 PF14711 Respiratory nitrate reductase beta C-terminal MKI55_RS12010 PF14710 Respiratory nitrate reductase alpha N-terminal MKI55_RS12010 PF01568 Molydopterin dinucleotide binding domain MKI55_RS12010 PF00384 Molybdopterin oxidoreductase MKI55_RS12015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases MKI55_RS12020 PF00355 Rieske [2Fe-2S] domain MKI55_RS12025 PF01077 Nitrite and sulphite reductase 4Fe-4S domain MKI55_RS12025 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain MKI55_RS12025 PF07992 Pyridine nucleotide-disulphide oxidoreductase MKI55_RS12025 PF04324 BFD-like [2Fe-2S] binding domain MKI55_RS12025 PF18267 Rubredoxin NAD+ reductase C-terminal domain MKI55_RS12035 PF00583 Acetyltransferase (GNAT) family MKI55_RS12040 PF01226 Formate/nitrite transporter MKI55_RS12055 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment MKI55_RS12055 PF01297 Zinc-uptake complex component A periplasmic MKI55_RS12065 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system MKI55_RS12090 PF02388 FemAB family MKI55_RS12095 PF00005 ABC transporter MKI55_RS12100 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS12105 PF00497 Bacterial extracellular solute-binding proteins, family 3 MKI55_RS12110 PF07690 Major Facilitator Superfamily MKI55_RS12120 PF00300 Histidine phosphatase superfamily (branch 1) MKI55_RS12125 PF16916 Dimerisation domain of Zinc Transporter MKI55_RS12125 PF01545 Cation efflux family MKI55_RS12135 PF11621 C3 binding domain 4 of IgG-bind protein SBI MKI55_RS12135 PF02216 B domain MKI55_RS12140 PF07968 Leukocidin/Hemolysin toxin family MKI55_RS12145 PF07968 Leukocidin/Hemolysin toxin family MKI55_RS12150 PF07968 Leukocidin/Hemolysin toxin family MKI55_RS12160 PF03744 6-carboxyhexanoate--CoA ligase MKI55_RS12165 PF00155 Aminotransferase class I and II MKI55_RS12170 PF06968 Biotin and Thiamin Synthesis associated domain MKI55_RS12170 PF04055 Radical SAM superfamily MKI55_RS12175 PF00202 Aminotransferase class-III MKI55_RS12190 PF00664 ABC transporter transmembrane region MKI55_RS12190 PF00005 ABC transporter MKI55_RS12195 PF00664 ABC transporter transmembrane region MKI55_RS12195 PF00005 ABC transporter MKI55_RS12195 PF08021 Siderophore-interacting FAD-binding domain MKI55_RS12195 PF04954 Siderophore-interacting protein MKI55_RS12210 PF02595 Glycerate kinase family MKI55_RS12220 PF07690 Major Facilitator Superfamily MKI55_RS12240 PF00324 Amino acid permease MKI55_RS12245 PF00999 Sodium/hydrogen exchanger family MKI55_RS12250 PF13520 Amino acid permease MKI55_RS12255 PF00144 Beta-lactamase MKI55_RS12265 PF08546 Ketopantoate reductase PanE/ApbA C terminal MKI55_RS12265 PF02558 Ketopantoate reductase PanE/ApbA MKI55_RS12270 PF07690 Major Facilitator Superfamily MKI55_RS12275 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS12280 PF04069 Substrate binding domain of ABC-type glycine betaine transport system MKI55_RS12285 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS12290 PF00005 ABC transporter MKI55_RS12290 PF00571 CBS domain MKI55_RS12305 PF08818 Domain of unknown function (DU1801) MKI55_RS12310 PF13520 Amino acid permease MKI55_RS12315 PF00135 Carboxylesterase family MKI55_RS12320 PF07690 Major Facilitator Superfamily MKI55_RS12325 PF03649 Uncharacterised protein family (UPF0014) MKI55_RS12330 PF00005 ABC transporter MKI55_RS12335 PF05343 M42 glutamyl aminopeptidase MKI55_RS12340 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system MKI55_RS12350 PF06998 Protein of unknown function (DUF1307) MKI55_RS12355 PF01645 Conserved region in glutamate synthase MKI55_RS12365 PF07690 Major Facilitator Superfamily MKI55_RS12370 PF00005 ABC transporter MKI55_RS12375 PF00005 ABC transporter MKI55_RS12380 PF12911 N-terminal TM domain of oligopeptide transport permease C MKI55_RS12380 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS12385 PF00528 Binding-protein-dependent transport system inner membrane component MKI55_RS12390 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle MKI55_RS12395 PF10100 Staphylopine dehydrogenase MKI55_RS12410 PF12706 Beta-lactamase superfamily domain MKI55_RS12420 PF03806 AbgT putative transporter family MKI55_RS12425 PF02627 Carboxymuconolactone decarboxylase family MKI55_RS12445 PF00106 short chain dehydrogenase MKI55_RS12470 PF04507 Csa1 family MKI55_RS12495 PF04507 Csa1 family MKI55_RS12500 PF04507 Csa1 family MKI55_RS12505 PF04507 Csa1 family MKI55_RS12515 PF00293 NUDIX domain MKI55_RS12520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III MKI55_RS12520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain MKI55_RS12520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I MKI55_RS12520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II MKI55_RS12550 PF13463 Winged helix DNA-binding domain MKI55_RS12560 PF00483 Nucleotidyl transferase MKI55_RS12565 PF17961 Bacterial Ig domain MKI55_RS12565 PF02986 Fibronectin binding repeat MKI55_RS12565 PF00746 LPXTG cell wall anchor motif MKI55_RS12565 PF04650 YSIRK type signal peptide MKI55_RS12565 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MKI55_RS12570 PF02986 Fibronectin binding repeat MKI55_RS12570 PF00746 LPXTG cell wall anchor motif MKI55_RS12570 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MKI55_RS12570 PF04650 YSIRK type signal peptide MKI55_RS12570 PF17961 Bacterial Ig domain MKI55_RS12580 PF02447 GntP family permease MKI55_RS12585 PF00370 FGGY family of carbohydrate kinases, N-terminal domain MKI55_RS12585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain MKI55_RS12590 PF00392 Bacterial regulatory proteins, gntR family MKI55_RS12590 PF07729 FCD domain MKI55_RS12595 PF13411 MerR HTH family regulatory protein MKI55_RS12600 PF04607 Region found in RelA / SpoT proteins MKI55_RS12605 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) MKI55_RS12615 PF07690 Major Facilitator Superfamily MKI55_RS12620 PF09335 SNARE associated Golgi protein MKI55_RS12630 PF00005 ABC transporter MKI55_RS12640 PF06874 Firmicute fructose-1,6-bisphosphatase MKI55_RS12650 PF01738 Dienelactone hydrolase family MKI55_RS12655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKI55_RS12660 PF01047 MarR family MKI55_RS12670 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily MKI55_RS12675 PF00881 Nitroreductase family MKI55_RS12680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKI55_RS12680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKI55_RS12690 PF00005 ABC transporter MKI55_RS12700 PF04203 Sortase domain MKI55_RS12720 PF03313 Serine dehydratase alpha chain MKI55_RS12725 PF01842 ACT domain MKI55_RS12725 PF03315 Serine dehydratase beta chain MKI55_RS12740 PF00892 EamA-like transporter family MKI55_RS12745 PF00934 PE family MKI55_RS12745 PF07859 alpha/beta hydrolase fold MKI55_RS12760 PF00367 phosphotransferase system, EIIB MKI55_RS12760 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 MKI55_RS12760 PF02378 Phosphotransferase system, EIIC MKI55_RS12765 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain MKI55_RS12765 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain MKI55_RS12765 PF00205 Thiamine pyrophosphate enzyme, central domain MKI55_RS12770 PF04172 LrgB-like family MKI55_RS12775 PF03788 LrgA family MKI55_RS12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family MKI55_RS12780 PF03466 LysR substrate binding domain MKI55_RS12790 PF05257 CHAP domain MKI55_RS12795 PF00368 Hydroxymethylglutaryl-coenzyme A reductase MKI55_RS12800 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal MKI55_RS12800 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal MKI55_RS12805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain MKI55_RS12805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain MKI55_RS12810 PF17871 AAA lid domain MKI55_RS12810 PF10431 C-terminal, D2-small domain, of ClpB protein MKI55_RS12810 PF00004 ATPase family associated with various cellular activities (AAA) MKI55_RS12810 PF07724 AAA domain (Cdc48 subfamily) MKI55_RS12820 PF07664 Ferrous iron transport protein B C terminus MKI55_RS12820 PF17910 FeoB cytosolic helical domain MKI55_RS12820 PF02421 Ferrous iron transport protein B MKI55_RS12820 PF07670 Nucleoside recognition MKI55_RS12830 PF03176 MMPL family MKI55_RS12845 PF00171 Aldehyde dehydrogenase family MKI55_RS12850 PF00132 Bacterial transferase hexapeptide (six repeats) MKI55_RS12850 PF14602 Hexapeptide repeat of succinyl-transferase MKI55_RS12850 PF12464 Maltose acetyltransferase MKI55_RS12870 PF00403 Heavy-metal-associated domain MKI55_RS12875 PF00403 Heavy-metal-associated domain MKI55_RS12880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKI55_RS12880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKI55_RS12885 PF00155 Aminotransferase class I and II MKI55_RS12890 PF01593 Flavin containing amine oxidoreductase MKI55_RS12900 PF00535 Glycosyl transferase family 2 MKI55_RS12905 PF01593 Flavin containing amine oxidoreductase MKI55_RS12920 PF01757 Acyltransferase family MKI55_RS12930 PF01464 Transglycosylase SLT domain MKI55_RS12955 PF05979 Bacterial protein of unknown function (DUF896) MKI55_RS12975 PF00440 Bacterial regulatory proteins, tetR family MKI55_RS12980 PF00106 short chain dehydrogenase MKI55_RS12990 PF00561 alpha/beta hydrolase fold MKI55_RS12995 PF02492 CobW/HypB/UreG, nucleotide-binding domain MKI55_RS12995 PF07683 Cobalamin synthesis protein cobW C-terminal domain MKI55_RS13025 PF13610 DDE domain MKI55_RS13030 PF01636 Phosphotransferase enzyme family MKI55_RS13035 PF00583 Acetyltransferase (GNAT) family MKI55_RS13045 PF13610 DDE domain MKI55_RS13060 PF00005 ABC transporter MKI55_RS13070 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS13070 PF00072 Response regulator receiver domain MKI55_RS13075 PF13610 DDE domain MKI55_RS13080 PF00392 Bacterial regulatory proteins, gntR family MKI55_RS13080 PF00155 Aminotransferase class I and II MKI55_RS13090 PF01810 LysE type translocator MKI55_RS13100 PF13610 DDE domain MKI55_RS13105 PF00005 ABC transporter MKI55_RS13110 PF01636 Phosphotransferase enzyme family MKI55_RS13115 PF02796 Helix-turn-helix domain of resolvase MKI55_RS13115 PF00239 Resolvase, N terminal domain MKI55_RS13120 PF01022 Bacterial regulatory protein, arsR family MKI55_RS13125 PF00403 Heavy-metal-associated domain MKI55_RS13145 PF13610 DDE domain MKI55_RS13165 PF00583 Acetyltransferase (GNAT) family MKI55_RS13170 PF01636 Phosphotransferase enzyme family MKI55_RS13175 PF08279 HTH domain MKI55_RS13175 PF13280 WYL domain MKI55_RS13180 PF13610 DDE domain MKI55_RS13190 PF01526 Tn3 transposase DDE domain MKI55_RS13190 PF13700 Domain of unknown function (DUF4158) MKI55_RS13215 PF00679 Elongation factor G C-terminus MKI55_RS13215 PF14492 Elongation Factor G, domain II MKI55_RS13215 PF03764 Elongation factor G, domain IV MKI55_RS13215 PF00009 Elongation factor Tu GTP binding domain MKI55_RS13220 PF13610 DDE domain MKI55_RS13250 PF13610 DDE domain MKI55_RS13255 PF02661 Fic/DOC family MKI55_RS13260 PF00239 Resolvase, N terminal domain MKI55_RS13260 PF02796 Helix-turn-helix domain of resolvase MKI55_RS13265 PF00665 Integrase core domain MKI55_RS13265 PF13276 HTH-like domain MKI55_RS13265 PF13333 Integrase core domain MKI55_RS13290 PF08708 Primase C terminal 1 (PriCT-1) MKI55_RS13310 PF13610 DDE domain MKI55_RS13315 PF00872 Transposase, Mutator family MKI55_RS13320 PF01636 Phosphotransferase enzyme family MKI55_RS13325 PF00583 Acetyltransferase (GNAT) family MKI55_RS13335 PF13610 DDE domain MKI55_RS13345 PF02486 Replication initiation factor MKI55_RS13355 PF13610 DDE domain MKI55_RS13370 PF01471 Putative peptidoglycan binding domain MKI55_RS13370 PF08924 Domain of unknown function (DUF1906) MKI55_RS13380 PF00239 Resolvase, N terminal domain MKI55_RS13380 PF02796 Helix-turn-helix domain of resolvase MKI55_RS13385 PF12826 Helix-hairpin-helix motif MKI55_RS13385 PF03120 NAD-dependent DNA ligase OB-fold domain MKI55_RS13385 PF00533 BRCA1 C Terminus (BRCT) domain MKI55_RS13385 PF01653 NAD-dependent DNA ligase adenylation domain MKI55_RS13385 PF03119 NAD-dependent DNA ligase C4 zinc finger domain MKI55_RS13395 PF13610 DDE domain MKI55_RS13405 PF00072 Response regulator receiver domain MKI55_RS13405 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS13410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS13410 PF00512 His Kinase A (phospho-acceptor) domain MKI55_RS13415 PF01610 Transposase MKI55_RS13415 PF13683 Integrase core domain MKI55_RS13420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain MKI55_RS13420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain MKI55_RS13425 PF01820 D-ala D-ala ligase N-terminus MKI55_RS13425 PF07478 D-ala D-ala ligase C-terminus MKI55_RS13430 PF01427 D-ala-D-ala dipeptidase MKI55_RS13435 PF02557 D-alanyl-D-alanine carboxypeptidase MKI55_RS13440 PF04892 VanZ like family MKI55_RS13445 PF01022 Bacterial regulatory protein, arsR family MKI55_RS13460 PF02796 Helix-turn-helix domain of resolvase MKI55_RS13460 PF00239 Resolvase, N terminal domain MKI55_RS13475 PF02384 N-6 DNA Methylase MKI55_RS13475 PF12161 HsdM N-terminal domain MKI55_RS13480 PF13610 DDE domain MKI55_RS13505 PF13610 DDE domain MKI55_RS13525 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system MKI55_RS13535 PF00239 Resolvase, N terminal domain MKI55_RS13535 PF02796 Helix-turn-helix domain of resolvase MKI55_RS13540 PF00817 impB/mucB/samB family MKI55_RS13540 PF11799 impB/mucB/samB family C-terminal domain MKI55_RS13540 PF11798 IMS family HHH motif MKI55_RS13560 PF13614 AAA domain MKI55_RS13570 PF06970 Replication initiator protein A (RepA) N-terminus MKI55_RS13570 PF18008 Replication initiator protein A C-terminal domain MKI55_RS13575 PF13610 DDE domain MKI55_RS13580 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) MKI55_RS13585 PF00398 Ribosomal RNA adenine dimethylase MKI55_RS13610 PF08241 Methyltransferase domain MKI55_RS13615 PF04439 Streptomycin adenylyltransferase MKI55_RS13620 PF00583 Acetyltransferase (GNAT) family MKI55_RS13625 PF01636 Phosphotransferase enzyme family MKI55_RS13645 PF13610 DDE domain MKI55_RS13680 PF13610 DDE domain MKI55_RS13690 PF03881 Fructosamine kinase MKI55_RS13695 PF01180 Dihydroorotate dehydrogenase MKI55_RS13705 PF02677 Epoxyqueuosine reductase QueH MKI55_RS13730 PF00089 Trypsin MKI55_RS13735 PF02261 Aspartate decarboxylase MKI55_RS13740 PF02569 Pantoate-beta-alanine ligase MKI55_RS13745 PF02548 Ketopantoate hydroxymethyltransferase MKI55_RS13750 PF08546 Ketopantoate reductase PanE/ApbA C terminal MKI55_RS13750 PF02558 Ketopantoate reductase PanE/ApbA MKI55_RS13755 PF03306 Alpha-acetolactate decarboxylase MKI55_RS13760 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain MKI55_RS13760 PF00056 lactate/malate dehydrogenase, NAD binding domain MKI55_RS13765 PF13520 Amino acid permease MKI55_RS13770 PF00202 Aminotransferase class-III MKI55_RS13780 PF00274 Fructose-bisphosphate aldolase class-I MKI55_RS13785 PF06039 Malate:quinone oxidoreductase (Mqo) MKI55_RS13795 PF13193 AMP-binding enzyme C-terminal domain MKI55_RS13795 PF00501 AMP-binding enzyme MKI55_RS13810 PF00732 GMC oxidoreductase MKI55_RS13810 PF05199 GMC oxidoreductase MKI55_RS13815 PF00171 Aldehyde dehydrogenase family MKI55_RS13830 PF02028 BCCT, betaine/carnitine/choline family transporter MKI55_RS13850 PF13597 Anaerobic ribonucleoside-triphosphate reductase MKI55_RS13850 PF03477 ATP cone domain MKI55_RS13855 PF03600 Citrate transporter MKI55_RS13865 PF14824 Sirohaem biosynthesis protein central MKI55_RS13870 PF00667 FAD binding domain MKI55_RS13870 PF00258 Flavodoxin MKI55_RS13870 PF00175 Oxidoreductase NAD-binding domain MKI55_RS13880 PF00255 Glutathione peroxidase MKI55_RS13900 PF00005 ABC transporter MKI55_RS13905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase MKI55_RS13910 PF00072 Response regulator receiver domain MKI55_RS13910 PF00486 Transcriptional regulatory protein, C terminal MKI55_RS13920 PF00245 Alkaline phosphatase MKI55_RS13930 PF01047 MarR family MKI55_RS13940 PF04650 YSIRK type signal peptide MKI55_RS13940 PF10425 C-terminus of bacterial fibrinogen-binding adhesin MKI55_RS13940 PF00746 LPXTG cell wall anchor motif MKI55_RS13940 PF17961 Bacterial Ig domain MKI55_RS13945 PF00027 Cyclic nucleotide-binding domain MKI55_RS13945 PF13545 Crp-like helix-turn-helix domain MKI55_RS13950 PF00696 Amino acid kinase family MKI55_RS13955 PF13520 Amino acid permease MKI55_RS13960 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain MKI55_RS13960 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain MKI55_RS13975 PF01316 Arginine repressor, DNA binding domain MKI55_RS13975 PF02863 Arginine repressor, C-terminal domain MKI55_RS13980 PF07504 Fungalysin/Thermolysin Propeptide Motif MKI55_RS13980 PF03413 Peptidase propeptide and YPEB domain MKI55_RS13980 PF01447 Thermolysin metallopeptidase, catalytic domain MKI55_RS13980 PF02868 Thermolysin metallopeptidase, alpha-helical domain MKI55_RS13995 PF08279 HTH domain MKI55_RS13995 PF00874 PRD domain MKI55_RS13995 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKI55_RS13995 PF05043 Mga helix-turn-helix domain MKI55_RS14000 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 MKI55_RS14000 PF02378 Phosphotransferase system, EIIC MKI55_RS14000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit MKI55_RS14005 PF01238 Phosphomannose isomerase type I MKI55_RS14010 PF01061 ABC-2 type transporter MKI55_RS14015 PF05257 CHAP domain MKI55_RS14015 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase MKI55_RS14020 PF00857 Isochorismatase family MKI55_RS14020 PF00550 Phosphopantetheine attachment site MKI55_RS14025 PF01468 GA module MKI55_RS14035 PF00534 Glycosyl transferases group 1 MKI55_RS14040 PF07517 SecA DEAD-like domain MKI55_RS14040 PF01043 SecA preprotein cross-linking domain MKI55_RS14040 PF07516 SecA Wing and Scaffold domain MKI55_RS14045 PF15432 Accessory Sec secretory system ASP3 MKI55_RS14050 PF16929 Accessory Sec system GspB-transporter MKI55_RS14055 PF16993 Accessory Sec system protein Asp1 MKI55_RS14060 PF00344 SecY translocase MKI55_RS14065 PF00746 LPXTG cell wall anchor motif MKI55_RS14070 PF01613 Flavin reductase like domain MKI55_RS14090 PF01613 Flavin reductase like domain MKI55_RS14095 PF01641 SelR domain MKI55_RS14095 PF01625 Peptide methionine sulfoxide reductase MKI55_RS14110 PF13614 AAA domain MKI55_RS14115 PF02706 Chain length determinant protein MKI55_RS14120 PF00440 Bacterial regulatory proteins, tetR family MKI55_RS14120 PF18665 Tetracyclin repressor-like, C-terminal domain MKI55_RS14125 PF00535 Glycosyl transferase family 2 MKI55_RS14135 PF01522 Polysaccharide deacetylase MKI55_RS14140 PF01757 Acyltransferase family MKI55_RS14145 PF04650 YSIRK type signal peptide MKI55_RS14160 PF00977 Histidine biosynthesis protein MKI55_RS14165 PF00117 Glutamine amidotransferase class-I MKI55_RS14170 PF00475 Imidazoleglycerol-phosphate dehydratase MKI55_RS14175 PF00155 Aminotransferase class I and II MKI55_RS14180 PF00815 Histidinol dehydrogenase MKI55_RS14185 PF01634 ATP phosphoribosyltransferase MKI55_RS14190 PF13393 Histidyl-tRNA synthetase MKI55_RS14210 PF12558 ATP-binding cassette cobalt transporter MKI55_RS14210 PF00005 ABC transporter MKI55_RS14215 PF07155 ECF-type riboflavin transporter, S component MKI55_RS14225 PF04264 YceI-like domain MKI55_RS14230 PF08450 SMP-30/Gluconolactonase/LRE-like region MKI55_RS14235 PF17773 UPF0176 acylphosphatase like domain MKI55_RS14235 PF12368 Rhodanase C-terminal MKI55_RS14235 PF00581 Rhodanese-like domain MKI55_RS14240 PF01470 Pyroglutamyl peptidase MKI55_RS14260 PF00939 Sodium:sulfate symporter transmembrane region MKI55_RS14265 PF00892 EamA-like transporter family MKI55_RS14275 PF03824 High-affinity nickel-transport protein MKI55_RS14280 PF00797 N-acetyltransferase MKI55_RS14290 PF00005 ABC transporter MKI55_RS14295 PF02687 FtsX-like permease family MKI55_RS14305 PF00313 'Cold-shock' DNA-binding domain MKI55_RS14325 PF17762 HTH domain found in ParB protein MKI55_RS14325 PF02195 ParB-like nuclease domain MKI55_RS14330 PF02527 rRNA small subunit methyltransferase G MKI55_RS14335 PF13932 GidA associated domain MKI55_RS14335 PF01134 Glucose inhibited division protein A MKI55_RS14340 PF01926 50S ribosome-binding GTPase MKI55_RS14340 PF10396 GTP-binding protein TrmE N-terminus MKI55_RS14340 PF12631 MnmE helical domain MKI55_RS14345 PF00825 Ribonuclease P MKI55_RS14350 PF00468 Ribosomal protein L34 MKI55_RS14385 PF01022 Bacterial regulatory protein, arsR family MKI55_RS14395 PF08240 Alcohol dehydrogenase GroES-like domain MKI55_RS14395 PF00107 Zinc-binding dehydrogenase MKI55_RS14405 PF08139 Prokaryotic membrane lipoprotein lipid attachment site MKI55_RS14410 PF05569 BlaR1 peptidase M56 MKI55_RS14410 PF00905 Penicillin binding protein transpeptidase domain MKI55_RS14415 PF03965 Penicillinase repressor MKI55_RS14420 PF02796 Helix-turn-helix domain of resolvase MKI55_RS14420 PF00239 Resolvase, N terminal domain MKI55_RS14425 PF00665 Integrase core domain MKI55_RS14425 PF09299 Mu transposase, C-terminal MKI55_RS14430 PF00239 Resolvase, N terminal domain MKI55_RS14430 PF02796 Helix-turn-helix domain of resolvase MKI55_RS14435 PF01022 Bacterial regulatory protein, arsR family MKI55_RS14440 PF02040 Arsenical pump membrane protein MKI55_RS14445 PF01451 Low molecular weight phosphotyrosine protein phosphatase MKI55_RS14465 PF12704 MacB-like periplasmic core domain MKI55_RS14465 PF00005 ABC transporter MKI55_RS14465 PF02687 FtsX-like permease family MKI55_RS14475 PF01076 Plasmid recombination enzyme