locus-tag	class	description
MKI55_RS00015	COG2501	S4 domain
MKI55_RS00035	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
MKI55_RS00060	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MKI55_RS00070	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
MKI55_RS00080	COG0305	Participates in initiation and elongation during chromosome replication
MKI55_RS00110	COG4863	YycH protein
MKI55_RS00120	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
MKI55_RS00125	COG0737	Belongs to the 5'-nucleotidase family
MKI55_RS00160	COG0730	response to heat
MKI55_RS00165	COG1937	Protein conserved in bacteria
MKI55_RS00170	COG2210	Belongs to the sulfur carrier protein TusA family
MKI55_RS00175	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MKI55_RS00215	COG0823	Involved in the tonB-independent uptake of proteins
MKI55_RS00250	COG1473	amidohydrolase
MKI55_RS00260	COG1283	sodium-dependent phosphate transmembrane transporter activity
MKI55_RS00265	COG4716	Myosin-crossreactive antigen
MKI55_RS00270	COG0697	spore germination
MKI55_RS00285	COG1620	l-lactate permease
MKI55_RS00300	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MKI55_RS00305	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MKI55_RS00310	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MKI55_RS00320	COG2423	ornithine cyclodeaminase activity
MKI55_RS00325	COG4264	IucA IucC family
MKI55_RS00330	COG2814	Major facilitator Superfamily
MKI55_RS00335	COG4264	IucA IucC family
MKI55_RS00340	COG4264	IucA IucC family
MKI55_RS00350	COG0019	diaminopimelate decarboxylase activity
MKI55_RS00355	COG1475	DNA binding
MKI55_RS00375	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MKI55_RS00380	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
MKI55_RS00385	COG0438	transferase activity, transferring glycosyl groups
MKI55_RS00420	COG0813	purine-nucleoside phosphorylase activity
MKI55_RS00425	COG2814	Major facilitator Superfamily
MKI55_RS00445	COG3639	organic phosphonate transmembrane transporter activity
MKI55_RS00465	COG0737	Belongs to the 5'-nucleotidase family
MKI55_RS00480	COG1454	alcohol dehydrogenase
MKI55_RS00480	COG1012	belongs to the aldehyde dehydrogenase family
MKI55_RS00505	COG1086	Polysaccharide biosynthesis protein
MKI55_RS00515	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
MKI55_RS00545	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
MKI55_RS00555	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
MKI55_RS00560	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
MKI55_RS00570	COG2832	Protein of unknown function (DUF454)
MKI55_RS00605	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
MKI55_RS00610	COG1960	acyl-CoA dehydrogenase activity
MKI55_RS00615	COG5609	conserved protein (DUF2294)
MKI55_RS00665	COG1114	Component of the transport system for branched-chain amino acids
MKI55_RS00670	COG1335	isochorismatase
MKI55_RS00675	COG3961	Belongs to the TPP enzyme family
MKI55_RS00705	COG1737	Transcriptional regulator
MKI55_RS00730	COG1136	(ABC) transporter
MKI55_RS00735	COG1136	(ABC) transporter
MKI55_RS00735	COG0577	efflux transmembrane transporter activity
MKI55_RS00755	COG1131	(ABC) transporter
MKI55_RS00775	COG0601	transmembrane transport
MKI55_RS00780	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MKI55_RS00790	COG0405	Gamma-glutamyltransferase
MKI55_RS00810	COG3842	ATPase activity
MKI55_RS00820	COG1175	transmembrane transport
MKI55_RS00825	COG3833	ABC-type maltose transport systems, permease component
MKI55_RS00830	COG0673	inositol 2-dehydrogenase activity
MKI55_RS00835	COG0673	inositol 2-dehydrogenase activity
MKI55_RS00845	COG1755	Isoprenylcysteine carboxyl methyltransferase
MKI55_RS00900	COG0183	Belongs to the thiolase family
MKI55_RS00910	COG1960	acyl-CoA dehydrogenase activity
MKI55_RS00915	COG0318	PFAM AMP-dependent synthetase and ligase
MKI55_RS00930	COG0747	negative chemotaxis
MKI55_RS00935	COG3189	MarR family transcriptional regulator
MKI55_RS00960	COG1263	PTS System
MKI55_RS00960	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MKI55_RS00960	COG2190	(PTS) system
MKI55_RS00965	COG1957	nucleoside hydrolase
MKI55_RS00985	COG3414	Phosphotransferase system galactitol-specific IIB component
MKI55_RS00990	COG3775	system Galactitol-specific IIC component
MKI55_RS00995	COG1063	alcohol dehydrogenase
MKI55_RS01005	COG1063	alcohol dehydrogenase
MKI55_RS01015	COG1063	alcohol dehydrogenase
MKI55_RS01020	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MKI55_RS01025	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MKI55_RS01035	COG1063	alcohol dehydrogenase
MKI55_RS01040	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MKI55_RS01075	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MKI55_RS01080	COG1263	PTS System
MKI55_RS01080	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MKI55_RS01080	COG2190	(PTS) system
MKI55_RS01085	COG2723	6-phospho-beta-galactosidase activity
MKI55_RS01090	COG2226	methyltransferase
MKI55_RS01145	COG1131	(ABC) transporter
MKI55_RS01165	COG1388	LysM domain
MKI55_RS01165	COG3942	CHAP domain
MKI55_RS01285	COG1114	Component of the transport system for branched-chain amino acids
MKI55_RS01290	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
MKI55_RS01295	COG0577	efflux transmembrane transporter activity
MKI55_RS01325	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MKI55_RS01330	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MKI55_RS01355	COG3314	Sporulation integral membrane protein YlbJ
MKI55_RS01380	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MKI55_RS01410	COG3037	sugar-specific permease SgaT UlaA
MKI55_RS01420	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MKI55_RS01425	COG3711	transcriptional antiterminator
MKI55_RS01445	COG2271	Major facilitator Superfamily
MKI55_RS01450	COG0346	lactoylglutathione lyase activity
MKI55_RS01455	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MKI55_RS01460	COG0431	NADPH-dependent FMN reductase
MKI55_RS01470	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MKI55_RS01475	COG2822	iron ion transport
MKI55_RS01485	COG0672	)-iron permease
MKI55_RS01490	COG0805	protein transport
MKI55_RS01495	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
MKI55_RS01505	COG1476	TRANSCRIPTIONal
MKI55_RS01545	COG0646	methionine synthase
MKI55_RS01545	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
MKI55_RS01550	COG0626	cystathionine gamma-synthase activity
MKI55_RS01555	COG0626	cystathionine gamma-synthase activity
MKI55_RS01560	COG1475	DNA binding
MKI55_RS01565	COG0668	transmembrane transport
MKI55_RS01570	COG4481	Protein conserved in bacteria
MKI55_RS01575	COG0012	GTP binding
MKI55_RS01685	COG1823	symporter activity
MKI55_RS01715	COG2233	PERMEase
MKI55_RS01750	COG3759	membrane
MKI55_RS01910	COG0523	cobalamin synthesis protein
MKI55_RS01935	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MKI55_RS01945	COG5609	conserved protein (DUF2294)
MKI55_RS01960	COG1647	Serine aminopeptidase, S33
MKI55_RS01965	COG0733	neurotransmitter:sodium symporter activity
MKI55_RS01970	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MKI55_RS01975	COG0626	cystathionine gamma-synthase activity
MKI55_RS01985	COG2011	ABC-type metal ion transport system permease component
MKI55_RS01990	COG1464	Belongs to the NlpA lipoprotein family
MKI55_RS02025	COG0583	DNA-binding transcription factor activity
MKI55_RS02030	COG0067	glutamate synthase
MKI55_RS02030	COG0070	glutamate synthase
MKI55_RS02030	COG0069	glutamate synthase activity
MKI55_RS02035	COG0493	'glutamate synthase
MKI55_RS02045	COG1263	PTS System
MKI55_RS02045	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MKI55_RS02050	COG0366	Alpha amylase catalytic
MKI55_RS02055	COG2188	Transcriptional regulator
MKI55_RS02075	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
MKI55_RS02110	COG1982	Orn Lys Arg decarboxylase major
MKI55_RS02120	COG3870	Protein conserved in bacteria
MKI55_RS02125	COG0470	DNA polymerase III
MKI55_RS02130	COG1774	PSP1 C-terminal conserved region
MKI55_RS02140	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
MKI55_RS02150	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
MKI55_RS02160	COG0084	hydrolase, TatD family'
MKI55_RS02165	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MKI55_RS02175	COG4466	Protein conserved in bacteria
MKI55_RS02185	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MKI55_RS02190	COG0251	oxidation-reduction process
MKI55_RS02230	COG2244	polysaccharide biosynthetic process
MKI55_RS02235	COG3956	TIGRFAM MazG family protein
MKI55_RS02240	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
MKI55_RS02250	COG1098	S1 RNA binding domain
MKI55_RS02265	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MKI55_RS02290	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
MKI55_RS02385	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MKI55_RS02400	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MKI55_RS02410	COG3880	PFAM UvrB UvrC protein
MKI55_RS02425	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
MKI55_RS02430	COG4956	integral membrane protein (PIN domain superfamily)
MKI55_RS02450	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
MKI55_RS02505	COG2813	Specifically methylates the guanine in position
MKI55_RS02545	COG1473	amidohydrolase
MKI55_RS02575	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
MKI55_RS02580	COG1428	Deoxynucleoside kinase
MKI55_RS02585	COG1428	Deoxynucleoside kinase
MKI55_RS02595	COG0561	phosphatase activity
MKI55_RS02635	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MKI55_RS02650	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
MKI55_RS02740	COG0095	Lipoate-protein ligase
MKI55_RS02745	COG0083	homoserine kinase activity
MKI55_RS02765	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MKI55_RS02800	COG0667	Aldo Keto reductase
MKI55_RS02805	COG0655	NAD(P)H dehydrogenase (quinone) activity
MKI55_RS02815	COG1078	dGTPase activity
MKI55_RS02850	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MKI55_RS02855	COG4139	cobalamin transport
MKI55_RS02905	COG4974	Belongs to the 'phage' integrase family
MKI55_RS02960	COG0803	Belongs to the bacterial solute-binding protein 9 family
MKI55_RS02965	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MKI55_RS02970	COG1121	(ABC) transporter
MKI55_RS02975	COG1321	iron dependent repressor
MKI55_RS02985	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
MKI55_RS02995	COG1682	transport, permease protein
MKI55_RS03000	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MKI55_RS03010	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
MKI55_RS03015	COG1686	Belongs to the peptidase S11 family
MKI55_RS03020	COG1132	(ABC) transporter
MKI55_RS03025	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MKI55_RS03035	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MKI55_RS03040	COG1120	ATPase activity
MKI55_RS03045	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MKI55_RS03050	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MKI55_RS03055	COG2376	Dihydroxyacetone kinase
MKI55_RS03065	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
MKI55_RS03075	COG3949	Membrane
MKI55_RS03095	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MKI55_RS03110	COG1136	(ABC) transporter
MKI55_RS03115	COG0577	efflux transmembrane transporter activity
MKI55_RS03120	COG1392	Phosphate transport regulator
MKI55_RS03125	COG0306	phosphate transporter
MKI55_RS03130	COG1388	LysM domain
MKI55_RS03130	COG3942	CHAP domain
MKI55_RS03140	COG1917	Cupin 2, conserved barrel domain protein
MKI55_RS03140	COG4977	sequence-specific DNA binding
MKI55_RS03170	COG0583	DNA-binding transcription factor activity
MKI55_RS03175	COG2814	Major facilitator Superfamily
MKI55_RS03180	COG2839	Protein conserved in bacteria
MKI55_RS03210	COG1611	Belongs to the LOG family
MKI55_RS03230	COG4988	ABC transporter
MKI55_RS03235	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
MKI55_RS03245	COG0523	cobalamin synthesis protein
MKI55_RS03250	COG4989	oxidoreductase activity
MKI55_RS03260	COG0471	metal ion transport
MKI55_RS03265	COG0415	Belongs to the DNA photolyase family
MKI55_RS03295	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MKI55_RS03300	COG1349	DNA-binding transcription factor activity
MKI55_RS03305	COG1105	Belongs to the carbohydrate kinase PfkB family
MKI55_RS03315	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
MKI55_RS03320	COG1253	flavin adenine dinucleotide binding
MKI55_RS03325	COG0656	L-ascorbic acid biosynthetic process
MKI55_RS03330	COG0463	Glycosyl transferase, family 2
MKI55_RS03365	COG0720	synthase
MKI55_RS03375	COG0512	Glutamine amidotransferase of anthranilate synthase
MKI55_RS03375	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
MKI55_RS03380	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MKI55_RS03410	COG0488	(ABC) transporter
MKI55_RS03415	COG0514	ATP-dependent DNA helicase (RecQ)
MKI55_RS03420	COG1125	glycine betaine transport
MKI55_RS03420	COG0517	IMP dehydrogenase activity
MKI55_RS03425	COG1174	glycine betaine transport
MKI55_RS03450	COG3104	oligopeptide transport
MKI55_RS03475	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MKI55_RS03480	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MKI55_RS03490	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MKI55_RS03495	COG4605	iron ion homeostasis
MKI55_RS03500	COG4604	ABC transporter, ATP-binding protein
MKI55_RS03505	COG4607	ABC-type enterochelin transport system periplasmic component
MKI55_RS03560	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MKI55_RS03565	COG1739	Uncharacterized protein family UPF0029
MKI55_RS03575	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
MKI55_RS03580	COG1040	competence protein
MKI55_RS03610	COG3942	CHAP domain
MKI55_RS03610	COG1388	LysM domain
MKI55_RS03665	COG0391	Required for morphogenesis under gluconeogenic growth conditions
MKI55_RS03725	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MKI55_RS03730	COG1647	Serine aminopeptidase, S33
MKI55_RS03735	COG0557	exoribonuclease II activity
MKI55_RS03835	COG3728	DNA packaging
MKI55_RS03835	COG5484	DNA packaging
MKI55_RS03870	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MKI55_RS03875	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
MKI55_RS03935	COG1278	Cold shock
MKI55_RS03975	COG0406	alpha-ribazole phosphatase activity
MKI55_RS03980	COG1279	arginine transmembrane transporter activity
MKI55_RS04005	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MKI55_RS04010	COG1393	Belongs to the ArsC family
MKI55_RS04020	COG3878	Protein conserved in bacteria
MKI55_RS04025	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MKI55_RS04040	COG2011	ABC-type metal ion transport system permease component
MKI55_RS04045	COG1464	Belongs to the NlpA lipoprotein family
MKI55_RS04060	COG0396	ATPase activity
MKI55_RS04065	COG0719	Fe-S assembly protein
MKI55_RS04075	COG0822	iron-sulfur transferase activity
MKI55_RS04095	COG1253	flavin adenine dinucleotide binding
MKI55_RS04110	COG1801	Protein of unknown function DUF72
MKI55_RS04115	COG0730	response to heat
MKI55_RS04130	COG4470	Protein conserved in bacteria
MKI55_RS04150	COG2445	Protein of unknown function DUF86
MKI55_RS04180	COG1696	Membrane protein involved in D-alanine export
MKI55_RS04190	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
MKI55_RS04195	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
MKI55_RS04200	COG4837	Protein of unknown function (DUF1462)
MKI55_RS04205	COG1252	NADH dehydrogenase
MKI55_RS04215	COG0316	Belongs to the HesB IscA family
MKI55_RS04225	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
MKI55_RS04230	COG2056	Na+-H+ antiporter family
MKI55_RS04235	COG2050	protein possibly involved in aromatic compounds catabolism
MKI55_RS04290	COG1098	S1 RNA binding domain
MKI55_RS04295	COG1902	pentaerythritol trinitrate reductase activity
MKI55_RS04310	COG0584	glycerophosphoryl diester phosphodiesterase
MKI55_RS04330	COG0398	Pfam SNARE associated Golgi protein
MKI55_RS04370	COG0561	phosphatase activity
MKI55_RS04410	COG1881	PFAM PEBP family protein
MKI55_RS04440	COG0601	transmembrane transport
MKI55_RS04445	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MKI55_RS04450	COG0444	Belongs to the ABC transporter superfamily
MKI55_RS04455	COG4608	Belongs to the ABC transporter superfamily
MKI55_RS04460	COG4166	transmembrane transport
MKI55_RS04465	COG0747	negative chemotaxis
MKI55_RS04470	COG0444	Belongs to the ABC transporter superfamily
MKI55_RS04475	COG4608	Belongs to the ABC transporter superfamily
MKI55_RS04480	COG0601	transmembrane transport
MKI55_RS04485	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MKI55_RS04510	COG1164	Oligoendopeptidase f
MKI55_RS04520	COG2346	COG2346, Truncated hemoglobins
MKI55_RS04535	COG2357	RelA SpoT domain protein
MKI55_RS04545	COG0564	pseudouridine synthase activity
MKI55_RS04550	COG2239	Acts as a magnesium transporter
MKI55_RS04555	COG0569	domain protein
MKI55_RS04555	COG0475	glutathione-regulated potassium exporter activity
MKI55_RS04575	COG0628	permease
MKI55_RS04580	COG1115	amino acid carrier protein
MKI55_RS04620	COG0861	Integral membrane protein TerC family
MKI55_RS04640	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MKI55_RS04645	COG0737	Belongs to the 5'-nucleotidase family
MKI55_RS04660	COG4903	ComK protein
MKI55_RS04675	COG4873	Protein conserved in bacteria
MKI55_RS04725	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
MKI55_RS04735	COG2314	TM2 domain
MKI55_RS04740	COG0456	acetyltransferase
MKI55_RS04745	COG1575	Belongs to the MenA family. Type 1 subfamily
MKI55_RS04755	COG1169	isochorismate synthase
MKI55_RS04765	COG2267	carboxylic ester hydrolase activity
MKI55_RS04790	COG0436	Aminotransferase
MKI55_RS04795	COG3594	Acyltransferase
MKI55_RS04825	COG1316	TRANSCRIPTIONal
MKI55_RS04870	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
MKI55_RS04885	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MKI55_RS04925	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
MKI55_RS04930	COG4172	Belongs to the ABC transporter superfamily
MKI55_RS04935	COG4721	ABC-type cobalt transport system, permease component
MKI55_RS04950	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
MKI55_RS04970	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
MKI55_RS04975	COG1271	oxidase subunit
MKI55_RS04980	COG1294	oxidase, subunit
MKI55_RS04985	COG0569	domain protein
MKI55_RS05050	COG1176	ABC-type spermidine putrescine transport system, permease component I
MKI55_RS05055	COG1177	transmembrane transport
MKI55_RS05060	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
MKI55_RS05085	COG0483	inositol monophosphate 1-phosphatase activity
MKI55_RS05095	COG1217	gtp-binding protein TYPA
MKI55_RS05105	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
MKI55_RS05115	COG0772	Belongs to the SEDS family
MKI55_RS05145	COG3679	Belongs to the UPF0342 family
MKI55_RS05165	COG0742	ribosomal rna small subunit methyltransferase
MKI55_RS05220	COG4509	Sortase family
MKI55_RS05235	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MKI55_RS05265	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
MKI55_RS05265	COG1796	DNA polymerase
MKI55_RS05290	COG2009	succinate dehydrogenase
MKI55_RS05295	COG1053	succinate dehydrogenase
MKI55_RS05300	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
MKI55_RS05415	COG1288	antiporter activity
MKI55_RS05450	COG1011	Hydrolase
MKI55_RS05475	COG4839	cell division protein FtsL
MKI55_RS05480	COG0768	penicillin binding
MKI55_RS05495	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
MKI55_RS05500	COG0849	cell division
MKI55_RS05515	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
MKI55_RS05525	COG0762	integral membrane protein
MKI55_RS05530	COG2302	S4 RNA-binding domain
MKI55_RS05535	COG3599	regulation of cell shape
MKI55_RS05545	COG2514	catechol 2,3-dioxygenase activity
MKI55_RS05560	COG0564	pseudouridine synthase activity
MKI55_RS05570	COG2233	PERMEase
MKI55_RS05615	COG1293	RNA-binding protein homologous to eukaryotic snRNP
MKI55_RS05630	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
MKI55_RS05635	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
MKI55_RS05645	COG2314	TM2 domain
MKI55_RS05660	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MKI55_RS05660	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
MKI55_RS05670	COG0631	protein serine/threonine phosphatase activity
MKI55_RS05685	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
MKI55_RS05700	COG1302	Protein conserved in bacteria
MKI55_RS05745	COG1196	nuclear chromosome segregation
MKI55_RS05750	COG0552	protein localization to endoplasmic reticulum
MKI55_RS05760	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
MKI55_RS05815	COG2348	transferase activity, transferring amino-acyl groups
MKI55_RS05820	COG0758	DNA mediated transformation
MKI55_RS05915	COG0195	Participates in both transcription termination and antitermination
MKI55_RS05920	COG2740	Nucleic-acid-binding protein implicated in transcription termination
MKI55_RS05945	COG0196	riboflavin kinase activity
MKI55_RS05970	COG2188	Transcriptional regulator
MKI55_RS05975	COG0612	Peptidase, M16
MKI55_RS05980	COG0612	Peptidase, M16
MKI55_RS05985	COG0300	oxidoreductase activity
MKI55_RS06005	COG1546	Belongs to the CinA family
MKI55_RS06005	COG1058	Belongs to the CinA family
MKI55_RS06025	COG1692	metallophosphoesterase
MKI55_RS06030	COG0674	pyruvate-flavodoxin oxidoreductase activity
MKI55_RS06030	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
MKI55_RS06035	COG1013	pyruvate-flavodoxin oxidoreductase activity
MKI55_RS06070	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
MKI55_RS06075	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
MKI55_RS06100	COG1923	regulation of RNA biosynthetic process
MKI55_RS06110	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MKI55_RS06115	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
MKI55_RS06120	COG0789	Transcriptional regulator
MKI55_RS06190	COG1131	(ABC) transporter
MKI55_RS06205	COG2197	response regulator
MKI55_RS06215	COG1525	nuclease
MKI55_RS06230	COG0527	aspartate kinase activity
MKI55_RS06235	COG0460	homoserine dehydrogenase
MKI55_RS06240	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
MKI55_RS06265	COG0833	amino acid
MKI55_RS06295	COG2340	Cysteine-rich secretory protein family
MKI55_RS06330	COG4846	Membrane protein involved in cytochrome C biogenesis
MKI55_RS06350	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MKI55_RS06360	COG0824	Thioesterase
MKI55_RS06385	COG1115	amino acid carrier protein
MKI55_RS06400	COG0628	permease
MKI55_RS06425	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MKI55_RS06435	COG1363	Peptidase, m42
MKI55_RS06440	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MKI55_RS06445	COG0512	Glutamine amidotransferase of anthranilate synthase
MKI55_RS06490	COG0561	phosphatase activity
MKI55_RS06535	COG0704	Plays a role in the regulation of phosphate uptake
MKI55_RS06545	COG0581	inorganic phosphate transmembrane transporter activity
MKI55_RS06550	COG0573	inorganic phosphate transmembrane transporter activity
MKI55_RS06570	COG0488	(ABC) transporter
MKI55_RS06575	COG0527	aspartate kinase activity
MKI55_RS06580	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
MKI55_RS06650	COG4548	von Willebrand factor, type A
MKI55_RS06655	COG0714	Associated with various cellular activities
MKI55_RS06700	COG0671	phosphoesterase, PA-phosphatase related
MKI55_RS06775	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
MKI55_RS06795	COG0531	amino acid
MKI55_RS06810	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MKI55_RS06815	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
MKI55_RS06830	COG0116	Belongs to the methyltransferase superfamily
MKI55_RS06865	COG4499	WXG100 protein secretion system (Wss), protein YukC
MKI55_RS06865	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MKI55_RS06875	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
MKI55_RS06880	COG3935	DnaD domain protein
MKI55_RS06905	COG0438	transferase activity, transferring glycosyl groups
MKI55_RS06910	COG1694	Mazg nucleotide pyrophosphohydrolase
MKI55_RS06915	COG2738	Putative neutral zinc metallopeptidase
MKI55_RS06920	COG4347	Protein of unknown function (DUF1405)
MKI55_RS06960	COG0142	geranyltranstransferase activity
MKI55_RS07015	COG0492	ferredoxin-NADP+ reductase activity
MKI55_RS07030	COG0514	ATP-dependent DNA helicase (RecQ)
MKI55_RS07040	COG1141	Ferredoxin
MKI55_RS07085	COG0745	RESPONSE REGULATOR receiver
MKI55_RS07090	COG1187	pseudouridine synthase activity
MKI55_RS07115	COG0735	belongs to the Fur family
MKI55_RS07120	COG0494	nUDIX hydrolase
MKI55_RS07125	COG0667	Aldo Keto reductase
MKI55_RS07135	COG4221	oxidoreductase activity
MKI55_RS07150	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MKI55_RS07160	COG0366	Alpha amylase catalytic
MKI55_RS07165	COG1609	Transcriptional regulator
MKI55_RS07190	COG2195	Cleaves the N-terminal amino acid of tripeptides
MKI55_RS07200	COG4129	membrane
MKI55_RS07210	COG0508	dehydrogenase complex catalyzes the overall conversion of
MKI55_RS07215	COG0022	dehydrogenase e1 component
MKI55_RS07220	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MKI55_RS07225	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MKI55_RS07230	COG0497	DNA recombination
MKI55_RS07260	COG1302	Protein conserved in bacteria
MKI55_RS07265	COG0439	Biotin carboxylase
MKI55_RS07270	COG0511	ligase activity, forming carbon-carbon bonds
MKI55_RS07280	COG0006	proline dipeptidase activity
MKI55_RS07295	COG0095	Lipoate-protein ligase
MKI55_RS07300	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MKI55_RS07345	COG4537	Required for transformation and DNA binding
MKI55_RS07350	COG1459	type II secretion system
MKI55_RS07355	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
MKI55_RS07360	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MKI55_RS07365	COG0011	TIGRFAM Protein of
MKI55_RS07370	COG1940	carbohydrate kinase activity
MKI55_RS07375	COG4483	Protein conserved in bacteria
MKI55_RS07385	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
MKI55_RS07395	COG0768	penicillin binding
MKI55_RS07410	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MKI55_RS07415	COG1121	(ABC) transporter
MKI55_RS07425	COG0513	Belongs to the DEAD box helicase family
MKI55_RS07435	COG2384	SAM-dependent methyltransferase
MKI55_RS07455	COG0517	IMP dehydrogenase activity
MKI55_RS07475	COG0295	cytidine deaminase activity
MKI55_RS07490	COG1702	phosphate starvation-inducible protein PhoH
MKI55_RS07505	COG1030	water channel activity
MKI55_RS07515	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
MKI55_RS07520	COG1385	rRNA (uridine-N3-)-methyltransferase activity
MKI55_RS07550	COG0635	Involved in the biosynthesis of porphyrin-containing compound
MKI55_RS07565	COG1466	dna polymerase III delta subunit
MKI55_RS07570	COG2333	competence protein COMEC
MKI55_RS07570	COG0658	competence protein
MKI55_RS07575	COG2131	deaminase
MKI55_RS07580	COG2183	response to ionizing radiation
MKI55_RS07585	COG2226	methyltransferase
MKI55_RS07590	COG0799	negative regulation of ribosome biogenesis
MKI55_RS07595	COG1713	HD superfamily hydrolase involved in NAD metabolism
MKI55_RS07605	COG1534	Rna-binding protein
MKI55_RS07615	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
MKI55_RS07620	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
MKI55_RS07640	COG3177	Filamentation induced by cAMP protein fic
MKI55_RS07645	COG1914	H( )-stimulated, divalent metal cation uptake system
MKI55_RS07655	COG0439	Biotin carboxylase
MKI55_RS07660	COG0511	ligase activity, forming carbon-carbon bonds
MKI55_RS07665	COG1984	allophanate hydrolase subunit 2
MKI55_RS07670	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
MKI55_RS07685	COG0826	peptidase U32
MKI55_RS07690	COG0826	peptidase U32
MKI55_RS07720	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
MKI55_RS07735	COG1104	cysteine desulfurase activity
MKI55_RS07740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MKI55_RS07750	COG3237	CsbD-like
MKI55_RS07755	COG1959	2 iron, 2 sulfur cluster binding
MKI55_RS07760	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
MKI55_RS07765	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
MKI55_RS07810	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
MKI55_RS07810	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
MKI55_RS07815	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MKI55_RS07815	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MKI55_RS07820	COG1862	Preprotein translocase
MKI55_RS07860	COG2868	ribosomal protein
MKI55_RS07905	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
MKI55_RS07910	COG0285	dihydrofolate synthase activity
MKI55_RS07920	COG2818	Glycosylase
MKI55_RS07955	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
MKI55_RS07990	COG4112	unkown
MKI55_RS08010	COG0833	amino acid
MKI55_RS08025	COG1484	DNA-dependent DNA replication
MKI55_RS08055	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MKI55_RS08055	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MKI55_RS08065	COG5002	protein histidine kinase activity
MKI55_RS08070	COG0745	RESPONSE REGULATOR receiver
MKI55_RS08080	COG0372	Belongs to the citrate synthase family
MKI55_RS08085	COG1113	amino acid transport
MKI55_RS08110	COG0281	malic enzyme
MKI55_RS08120	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
MKI55_RS08125	COG4109	DRTGG domain
MKI55_RS08165	COG0827	DNA restriction-modification system
MKI55_RS08175	COG0730	response to heat
MKI55_RS08185	COG1104	cysteine desulfurase activity
MKI55_RS08200	COG1956	GAF domain-containing protein
MKI55_RS08210	COG0584	glycerophosphoryl diester phosphodiesterase
MKI55_RS08215	COG1764	response to oxidative stress
MKI55_RS08220	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
MKI55_RS08225	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
MKI55_RS08240	COG1263	PTS System
MKI55_RS08240	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MKI55_RS08245	COG0204	Acyl-transferase
MKI55_RS08250	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MKI55_RS08285	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MKI55_RS08290	COG0454	-acetyltransferase
MKI55_RS08310	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
MKI55_RS08310	COG1605	Chorismate mutase
MKI55_RS08335	COG1674	ftsk spoiiie
MKI55_RS08340	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MKI55_RS08350	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MKI55_RS08355	COG1363	Peptidase, m42
MKI55_RS08365	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
MKI55_RS08375	COG0510	thiamine kinase activity
MKI55_RS08395	COG1187	pseudouridine synthase activity
MKI55_RS08400	COG2244	polysaccharide biosynthetic process
MKI55_RS08405	COG2081	HI0933 family
MKI55_RS08425	COG2814	Major facilitator Superfamily
MKI55_RS08430	COG1242	4 iron, 4 sulfur cluster binding
MKI55_RS08435	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
MKI55_RS08445	COG2267	carboxylic ester hydrolase activity
MKI55_RS08475	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MKI55_RS08475	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MKI55_RS08495	COG3266	domain, Protein
MKI55_RS08495	COG4193	domain, Protein
MKI55_RS08495	COG5632	N-Acetylmuramoyl-L-alanine amidase
MKI55_RS08525	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
MKI55_RS08550	COG0656	L-ascorbic acid biosynthetic process
MKI55_RS08570	COG1506	peptidase
MKI55_RS08575	COG2816	NAD+ diphosphatase activity
MKI55_RS08820	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
MKI55_RS08850	COG1131	(ABC) transporter
MKI55_RS08855	COG0537	adenosine 5'-monophosphoramidase activity
MKI55_RS08885	COG0420	3'-5' exonuclease activity
MKI55_RS08910	COG2197	response regulator
MKI55_RS08915	COG4585	Histidine kinase
MKI55_RS08915	COG2203	Gaf domain
MKI55_RS08920	COG0564	pseudouridine synthase activity
MKI55_RS08950	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
MKI55_RS08955	COG1126	abc transporter atp-binding protein
MKI55_RS08960	COG0765	amino acid transport
MKI55_RS09140	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
MKI55_RS09145	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
MKI55_RS09155	COG4129	membrane
MKI55_RS09180	COG1988	membrane-bound metal-dependent
MKI55_RS09190	COG1388	LysM domain
MKI55_RS09190	COG1134	teichoic acid transport
MKI55_RS09235	COG5632	N-Acetylmuramoyl-L-alanine amidase
MKI55_RS09235	COG1388	LysM domain
MKI55_RS09445	COG1484	DNA-dependent DNA replication
MKI55_RS09555	COG4974	Belongs to the 'phage' integrase family
MKI55_RS09560	COG0535	radical SAM domain protein
MKI55_RS09565	COG1607	acyl-coa hydrolase
MKI55_RS09570	COG2309	aminopeptidase activity
MKI55_RS09590	COG1295	ribonuclease BN
MKI55_RS09705	COG4851	CamS sex pheromone cAM373 precursor
MKI55_RS09725	COG4496	protein, YerC YecD
MKI55_RS09760	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
MKI55_RS09770	COG0077	Prephenate dehydratase
MKI55_RS09790	COG1335	isochorismatase
MKI55_RS09805	COG1012	belongs to the aldehyde dehydrogenase family
MKI55_RS09860	COG1131	(ABC) transporter
MKI55_RS09875	COG1725	Transcriptional regulator
MKI55_RS09925	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MKI55_RS09970	COG5484	DNA packaging
MKI55_RS09970	COG3728	DNA packaging
MKI55_RS10055	COG0582	viral genome integration into host DNA
MKI55_RS10120	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MKI55_RS10125	COG1621	beta-fructofuranosidase activity
MKI55_RS10130	COG1609	Transcriptional regulator
MKI55_RS10135	COG0004	ammonium transporteR
MKI55_RS10140	COG0425	Belongs to the sulfur carrier protein TusA family
MKI55_RS10145	COG2391	methyltransferase activity
MKI55_RS10155	COG0488	(ABC) transporter
MKI55_RS10165	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
MKI55_RS10175	COG0456	acetyltransferase
MKI55_RS10180	COG1214	PFAM Peptidase M22, glycoprotease
MKI55_RS10185	COG0802	atpase or kinase
MKI55_RS10200	COG0028	Belongs to the TPP enzyme family
MKI55_RS10270	COG2183	response to ionizing radiation
MKI55_RS10275	COG1191	sigma factor activity
MKI55_RS10285	COG1366	Belongs to the anti-sigma-factor antagonist family
MKI55_RS10290	COG2208	phosphoserine phosphatase activity
MKI55_RS10320	COG3428	Bacterial PH domain
MKI55_RS10350	COG2205	protein histidine kinase activity
MKI55_RS10355	COG0745	RESPONSE REGULATOR receiver
MKI55_RS10375	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
MKI55_RS10385	COG0772	Belongs to the SEDS family
MKI55_RS10400	COG1937	Protein conserved in bacteria
MKI55_RS10410	COG1418	mRNA catabolic process
MKI55_RS10445	COG0629	single-stranded DNA binding
MKI55_RS10520	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
MKI55_RS10545	COG0009	L-threonylcarbamoyladenylate synthase
MKI55_RS10550	COG2890	protein-(glutamine-N5) methyltransferase activity
MKI55_RS10570	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
MKI55_RS10610	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MKI55_RS10655	COG0813	purine-nucleoside phosphorylase activity
MKI55_RS10660	COG0783	Belongs to the Dps family
MKI55_RS10680	COG1482	cell wall glycoprotein biosynthetic process
MKI55_RS10685	COG0702	epimerase
MKI55_RS10690	COG0640	Transcriptional regulator
MKI55_RS10720	COG0561	phosphatase activity
MKI55_RS10725	COG1119	ATPase activity
MKI55_RS10740	COG3711	transcriptional antiterminator
MKI55_RS10770	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
MKI55_RS10840	COG0489	protein tyrosine kinase activity
MKI55_RS10845	COG2814	Major facilitator Superfamily
MKI55_RS10860	COG1272	protein, Hemolysin III
MKI55_RS10870	COG1988	membrane-bound metal-dependent
MKI55_RS10880	COG3314	Sporulation integral membrane protein YlbJ
MKI55_RS10885	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MKI55_RS10890	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MKI55_RS10895	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
MKI55_RS10905	COG3457	Alanine racemase
MKI55_RS10910	COG4264	IucA IucC family
MKI55_RS10915	COG2814	Major facilitator Superfamily
MKI55_RS10940	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MKI55_RS10950	COG2130	NADP-dependent
MKI55_RS11015	COG0656	L-ascorbic acid biosynthetic process
MKI55_RS11020	COG0789	Transcriptional regulator
MKI55_RS11030	COG5492	domain, Protein
MKI55_RS11050	COG3527	Alpha-acetolactate decarboxylase
MKI55_RS11055	COG0028	Belongs to the TPP enzyme family
MKI55_RS11165	COG0201	protein transport
MKI55_RS11280	COG2252	PERMEase
MKI55_RS11325	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MKI55_RS11385	COG1763	Mo-molybdopterin cofactor biosynthetic process
MKI55_RS11405	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
MKI55_RS11410	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
MKI55_RS11415	COG4149	molybdate abc transporter
MKI55_RS11420	COG0725	ABC transporter, periplasmic molybdate-binding protein
MKI55_RS11435	COG1268	BioY protein
MKI55_RS11450	COG1960	acyl-CoA dehydrogenase activity
MKI55_RS11455	COG4413	Urea transporter
MKI55_RS11515	COG3942	CHAP domain
MKI55_RS11525	COG1757	Na H antiporter
MKI55_RS11540	COG3942	CHAP domain
MKI55_RS11605	COG1113	amino acid transport
MKI55_RS11625	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MKI55_RS11630	COG0385	Bile acid
MKI55_RS11640	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MKI55_RS11640	COG1263	PTS System
MKI55_RS11645	COG1737	Transcriptional regulator
MKI55_RS11665	COG1028	Short-chain dehydrogenase reductase Sdr
MKI55_RS11670	COG1473	amidohydrolase
MKI55_RS11685	COG0583	DNA-binding transcription factor activity
MKI55_RS11710	COG2258	MOSC domain
MKI55_RS11730	COG1668	transmembrane transport
MKI55_RS11740	COG3152	Membrane
MKI55_RS11750	COG0786	glutamate:sodium symporter activity
MKI55_RS11760	COG0598	Magnesium transport protein CorA
MKI55_RS11775	COG0657	acetylesterase activity
MKI55_RS11785	COG2814	Major facilitator Superfamily
MKI55_RS11790	COG1566	PFAM secretion protein HlyD family protein
MKI55_RS11800	COG2814	Major facilitator Superfamily
MKI55_RS11860	COG1620	l-lactate permease
MKI55_RS11880	COG0604	alcohol dehydrogenase
MKI55_RS11905	COG1511	domain protein
MKI55_RS11920	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MKI55_RS11920	COG1263	PTS System
MKI55_RS11935	COG3871	stress protein (general stress protein 26)
MKI55_RS11975	COG0789	Transcriptional regulator
MKI55_RS11995	COG2181	nitrate reductase activity
MKI55_RS12005	COG1140	nitrate reductase beta subunit
MKI55_RS12010	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
MKI55_RS12020	COG2146	nitrite reductase [NAD(P)H] activity
MKI55_RS12025	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MKI55_RS12035	COG0454	-acetyltransferase
MKI55_RS12040	COG2116	formate transmembrane transporter activity
MKI55_RS12055	COG0803	Belongs to the bacterial solute-binding protein 9 family
MKI55_RS12055	COG3443	Belongs to the bacterial solute-binding protein 9 family
MKI55_RS12095	COG1126	abc transporter atp-binding protein
MKI55_RS12100	COG0765	amino acid transport
MKI55_RS12105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MKI55_RS12110	COG2814	Major facilitator Superfamily
MKI55_RS12125	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
MKI55_RS12165	COG0156	8-amino-7-oxononanoate synthase activity
MKI55_RS12175	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MKI55_RS12180	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
MKI55_RS12190	COG1132	(ABC) transporter
MKI55_RS12195	COG1132	(ABC) transporter
MKI55_RS12195	COG2375	cellular response to nickel ion
MKI55_RS12210	COG1929	Belongs to the glycerate kinase type-1 family
MKI55_RS12220	COG2814	Major facilitator Superfamily
MKI55_RS12240	COG1113	amino acid transport
MKI55_RS12250	COG0531	amino acid
MKI55_RS12265	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
MKI55_RS12275	COG1174	glycine betaine transport
MKI55_RS12285	COG1174	glycine betaine transport
MKI55_RS12305	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
MKI55_RS12310	COG0531	amino acid
MKI55_RS12315	COG2272	Belongs to the type-B carboxylesterase lipase family
MKI55_RS12320	COG2814	Major facilitator Superfamily
MKI55_RS12325	COG0390	transport system, permease component
MKI55_RS12330	COG4619	ABC transporter
MKI55_RS12335	COG1363	Peptidase, m42
MKI55_RS12350	COG4808	Protein conserved in bacteria
MKI55_RS12355	COG0069	glutamate synthase activity
MKI55_RS12410	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
MKI55_RS12415	COG1028	Short-chain dehydrogenase reductase Sdr
MKI55_RS12420	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
MKI55_RS12425	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
MKI55_RS12515	COG0494	nUDIX hydrolase
MKI55_RS12555	COG1846	Transcriptional regulator
MKI55_RS12585	COG1070	Carbohydrate kinase
MKI55_RS12590	COG1802	Transcriptional regulator
MKI55_RS12595	COG0789	Transcriptional regulator
MKI55_RS12600	COG2357	RelA SpoT domain protein
MKI55_RS12605	COG4876	unkown
MKI55_RS12615	COG2271	Major facilitator Superfamily
MKI55_RS12620	COG0586	Pfam SNARE associated Golgi protein
MKI55_RS12630	COG1131	(ABC) transporter
MKI55_RS12645	COG3949	Membrane
MKI55_RS12650	COG0400	carboxylic ester hydrolase activity
MKI55_RS12655	COG0346	lactoylglutathione lyase activity
MKI55_RS12660	COG1846	Transcriptional regulator
MKI55_RS12670	COG2514	catechol 2,3-dioxygenase activity
MKI55_RS12685	COG0561	phosphatase activity
MKI55_RS12690	COG1131	(ABC) transporter
MKI55_RS12700	COG3764	Sortase (surface protein transpeptidase)
MKI55_RS12720	COG1760	l-serine dehydratase
MKI55_RS12725	COG1760	l-serine dehydratase
MKI55_RS12740	COG0697	spore germination
MKI55_RS12745	COG0657	acetylesterase activity
MKI55_RS12765	COG0028	Belongs to the TPP enzyme family
MKI55_RS12780	COG0583	DNA-binding transcription factor activity
MKI55_RS12790	COG3942	CHAP domain
MKI55_RS12800	COG3425	synthase
MKI55_RS12805	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MKI55_RS12830	COG2409	Drug exporters of the RND superfamily
MKI55_RS12885	COG0436	Aminotransferase
MKI55_RS12915	COG3942	CHAP domain
MKI55_RS12920	COG2755	lipolytic protein G-D-S-L family
MKI55_RS12920	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
MKI55_RS13035	COG0456	acetyltransferase
MKI55_RS13080	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MKI55_RS13090	COG1279	arginine transmembrane transporter activity
MKI55_RS13110	COG3173	Aminoglycoside phosphotransferase
MKI55_RS13165	COG0456	acetyltransferase
MKI55_RS13175	COG2378	regulation of single-species biofilm formation
MKI55_RS13260	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
MKI55_RS13265	COG2801	Transposase and inactivated derivatives
MKI55_RS13325	COG0456	acetyltransferase
MKI55_RS13370	COG3409	Peptidoglycan-binding domain 1 protein
MKI55_RS13385	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
MKI55_RS13525	COG4115	mRNA cleavage
MKI55_RS13540	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MKI55_RS13560	COG1192	Involved in chromosome partitioning
MKI55_RS13610	COG2226	methyltransferase
MKI55_RS13620	COG0456	acetyltransferase
MKI55_RS13690	COG3001	Fructosamine kinase
MKI55_RS13695	COG0167	dihydroorotate dehydrogenase activity
MKI55_RS13750	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
MKI55_RS13755	COG3527	Alpha-acetolactate decarboxylase
MKI55_RS13765	COG0531	amino acid
MKI55_RS13795	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MKI55_RS13815	COG1012	belongs to the aldehyde dehydrogenase family
MKI55_RS13825	COG1510	regulation of RNA biosynthetic process
MKI55_RS13830	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MKI55_RS13855	COG2851	Citrate transporter
MKI55_RS13870	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MKI55_RS13880	COG0386	Belongs to the glutathione peroxidase family
MKI55_RS13900	COG1136	(ABC) transporter
MKI55_RS13905	COG2205	protein histidine kinase activity
MKI55_RS13910	COG0745	RESPONSE REGULATOR receiver
MKI55_RS13920	COG1785	Belongs to the alkaline phosphatase family
MKI55_RS13930	COG1846	Transcriptional regulator
MKI55_RS13975	COG1438	arginine binding
MKI55_RS13995	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MKI55_RS13995	COG3711	transcriptional antiterminator
MKI55_RS14000	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MKI55_RS14000	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MKI55_RS14000	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MKI55_RS14005	COG1482	cell wall glycoprotein biosynthetic process
MKI55_RS14015	COG1705	Flagellar rod assembly protein muramidase FlgJ
MKI55_RS14015	COG3942	CHAP domain
MKI55_RS14020	COG1535	isochorismatase
MKI55_RS14020	COG3433	isochorismatase activity
MKI55_RS14035	COG0438	transferase activity, transferring glycosyl groups
MKI55_RS14050	COG1073	alpha beta
MKI55_RS14070	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MKI55_RS14090	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MKI55_RS14175	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MKI55_RS14260	COG0471	metal ion transport
MKI55_RS14265	COG2962	Rard protein
MKI55_RS14275	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
MKI55_RS14290	COG1136	(ABC) transporter
MKI55_RS14295	COG0577	efflux transmembrane transporter activity
MKI55_RS14305	COG1278	Cold shock
MKI55_RS14325	COG1475	DNA binding
MKI55_RS14395	COG0604	alcohol dehydrogenase
MKI55_RS14415	COG3682	Transcriptional regulator
MKI55_RS14465	COG0577	efflux transmembrane transporter activity
MKI55_RS14465	COG1136	(ABC) transporter