locus-tag class description OS088_RS00010 PF01695 IstB-like ATP binding protein OS088_RS00020 PF04507 Csa1 family OS088_RS00025 PF04507 Csa1 family OS088_RS00030 PF04507 Csa1 family OS088_RS00035 PF04507 Csa1 family OS088_RS00060 PF02492 CobW/HypB/UreG, nucleotide-binding domain OS088_RS00060 PF07683 Cobalamin synthesis protein cobW C-terminal domain OS088_RS00065 PF17063 Phenol-soluble modulin alpha 4 peptide OS088_RS00085 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OS088_RS00085 PF00361 Proton-conducting membrane transporter OS088_RS00090 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) OS088_RS00095 PF10057 Uncharacterized conserved protein (DUF2294) OS088_RS00110 PF12146 Serine aminopeptidase, S33 OS088_RS00120 PF00209 Sodium:neurotransmitter symporter family OS088_RS00125 PF00291 Pyridoxal-phosphate dependent enzyme OS088_RS00130 PF01053 Cys/Met metabolism PLP-dependent enzyme OS088_RS00140 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS00145 PF03180 NLPA lipoprotein OS088_RS00150 PF01476 LysM domain OS088_RS00150 PF05257 CHAP domain OS088_RS00160 PF00293 NUDIX domain OS088_RS00180 PF03466 LysR substrate binding domain OS088_RS00180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OS088_RS00185 PF00310 Glutamine amidotransferases class-II OS088_RS00185 PF04898 Glutamate synthase central domain OS088_RS00185 PF01645 Conserved region in glutamate synthase OS088_RS00185 PF01493 GXGXG motif OS088_RS00190 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster OS088_RS00190 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS00200 PF00367 phosphotransferase system, EIIB OS088_RS00200 PF02378 Phosphotransferase system, EIIC OS088_RS00205 PF16657 Maltogenic Amylase, C-terminal domain OS088_RS00205 PF00128 Alpha amylase, catalytic domain OS088_RS00210 PF00392 Bacterial regulatory proteins, gntR family OS088_RS00210 PF07702 UTRA domain OS088_RS00225 PF12169 DNA polymerase III subunits gamma and tau domain III OS088_RS00230 PF02575 YbaB/EbfC DNA-binding family OS088_RS00235 PF02132 RecR protein OS088_RS00235 PF13662 Toprim domain OS088_RS00260 PF01276 Orn/Lys/Arg decarboxylase, major domain OS088_RS00260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain OS088_RS00265 PF02223 Thymidylate kinase OS088_RS00270 PF06153 Cyclic-di-AMP receptor OS088_RS00275 PF09115 DNA polymerase III, delta subunit, C terminal OS088_RS00280 PF04468 PSP1 C-terminal conserved region OS088_RS00285 PF06156 Initiation control protein YabA OS088_RS00290 PF05175 Methyltransferase small domain OS088_RS00295 PF01541 GIY-YIG catalytic domain OS088_RS00300 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OS088_RS00305 PF09334 tRNA synthetases class I (M) OS088_RS00305 PF01588 Putative tRNA binding domain OS088_RS00305 PF08264 Anticodon-binding domain of tRNA OS088_RS00310 PF01026 TatD related DNase OS088_RS00315 PF13331 Domain of unknown function (DUF4093) OS088_RS00315 PF01751 Toprim domain OS088_RS00320 PF00398 Ribosomal RNA adenine dimethylase OS088_RS00325 PF06257 Biofilm formation stimulator VEG OS088_RS00330 PF00288 GHMP kinases N terminal domain OS088_RS00330 PF08544 GHMP kinases C terminal OS088_RS00335 PF09182 Bacterial purine repressor, N-terminal OS088_RS00335 PF00156 Phosphoribosyl transferase domain OS088_RS00340 PF01042 Endoribonuclease L-PSP OS088_RS00345 PF04026 SpoVG OS088_RS00355 PF00483 Nucleotidyl transferase OS088_RS00355 PF00132 Bacterial transferase hexapeptide (six repeats) OS088_RS00360 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase OS088_RS00360 PF14572 Phosphoribosyl synthetase-associated domain OS088_RS00365 PF14693 Ribosomal protein TL5, C-terminal domain OS088_RS00365 PF01386 Ribosomal L25p family OS088_RS00370 PF01195 Peptidyl-tRNA hydrolase OS088_RS00375 PF03461 TRCF domain OS088_RS00375 PF00270 DEAD/DEAH box helicase OS088_RS00375 PF02559 CarD-like/TRCF domain OS088_RS00375 PF00271 Helicase conserved C-terminal domain OS088_RS00375 PF17757 UvrB interaction domain OS088_RS00380 PF14667 Polysaccharide biosynthesis C-terminal domain OS088_RS00380 PF01943 Polysaccharide biosynthesis protein OS088_RS00385 PF03819 MazG nucleotide pyrophosphohydrolase domain OS088_RS00385 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OS088_RS00390 PF01479 S4 domain OS088_RS00400 PF00575 S1 RNA binding domain OS088_RS00405 PF11734 TilS substrate C-terminal domain OS088_RS00405 PF01171 PP-loop family OS088_RS00410 PF00156 Phosphoribosyl transferase domain OS088_RS00415 PF01434 Peptidase family M41 OS088_RS00415 PF06480 FtsH Extracellular OS088_RS00415 PF17862 AAA+ lid domain OS088_RS00415 PF00004 ATPase family associated with various cellular activities (AAA) OS088_RS00420 PF01430 Hsp33 protein OS088_RS00425 PF00291 Pyridoxal-phosphate dependent enzyme OS088_RS00430 PF00809 Pterin binding enzyme OS088_RS00435 PF02152 Dihydroneopterin aldolase OS088_RS00440 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) OS088_RS00450 PF01336 OB-fold nucleic acid binding domain OS088_RS00450 PF00152 tRNA synthetases class II (D, K and N) OS088_RS00520 PF00155 Aminotransferase class I and II OS088_RS00520 PF00392 Bacterial regulatory proteins, gntR family OS088_RS00525 PF01680 SOR/SNZ family OS088_RS00530 PF01174 SNO glutamine amidotransferase family OS088_RS00535 PF07662 Na+ dependent nucleoside transporter C-terminus OS088_RS00535 PF01773 Na+ dependent nucleoside transporter N-terminus OS088_RS00540 PF05848 CtsR N-terminal HTH domain OS088_RS00540 PF17727 CtsR C-terminal dimerization domain OS088_RS00545 PF02151 UvrB/uvrC motif OS088_RS00550 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain OS088_RS00555 PF00004 ATPase family associated with various cellular activities (AAA) OS088_RS00555 PF07724 AAA domain (Cdc48 subfamily) OS088_RS00555 PF17871 AAA lid domain OS088_RS00555 PF02861 Clp amino terminal domain, pathogenicity island component OS088_RS00555 PF10431 C-terminal, D2-small domain, of ClpB protein OS088_RS00560 PF18073 Rubredoxin metal binding domain OS088_RS00570 PF00749 tRNA synthetases class I (E and Q), catalytic domain OS088_RS00575 PF00132 Bacterial transferase hexapeptide (six repeats) OS088_RS00580 PF01406 tRNA synthetases class I (C) catalytic domain OS088_RS00580 PF09190 DALR domain OS088_RS00585 PF00636 Ribonuclease III domain OS088_RS00590 PF08032 RNA 2'-O ribose methyltransferase substrate binding OS088_RS00590 PF00588 SpoU rRNA Methylase family OS088_RS00605 PF00471 Ribosomal protein L33 OS088_RS00610 PF00584 SecE/Sec61-gamma subunits of protein translocation complex OS088_RS00615 PF00467 KOW motif OS088_RS00615 PF02357 Transcription termination factor nusG OS088_RS00620 PF00298 Ribosomal protein L11, RNA binding domain OS088_RS00620 PF03946 Ribosomal protein L11, N-terminal domain OS088_RS00625 PF00687 Ribosomal protein L1p/L10e family OS088_RS00630 PF00466 Ribosomal protein L10 OS088_RS00635 PF00542 Ribosomal protein L7/L12 C-terminal domain OS088_RS00635 PF16320 Ribosomal protein L7/L12 dimerisation domain OS088_RS00640 PF05175 Methyltransferase small domain OS088_RS00645 PF04563 RNA polymerase beta subunit OS088_RS00645 PF04561 RNA polymerase Rpb2, domain 2 OS088_RS00645 PF10385 RNA polymerase beta subunit external 1 domain OS088_RS00645 PF00562 RNA polymerase Rpb2, domain 6 OS088_RS00645 PF04560 RNA polymerase Rpb2, domain 7 OS088_RS00645 PF04565 RNA polymerase Rpb2, domain 3 OS088_RS00650 PF04998 RNA polymerase Rpb1, domain 5 OS088_RS00650 PF04997 RNA polymerase Rpb1, domain 1 OS088_RS00650 PF00623 RNA polymerase Rpb1, domain 2 OS088_RS00650 PF04983 RNA polymerase Rpb1, domain 3 OS088_RS00650 PF05000 RNA polymerase Rpb1, domain 4 OS088_RS00655 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family OS088_RS00660 PF00164 Ribosomal protein S12/S23 OS088_RS00665 PF00177 Ribosomal protein S7p/S5e OS088_RS00670 PF00679 Elongation factor G C-terminus OS088_RS00670 PF14492 Elongation Factor G, domain II OS088_RS00670 PF03764 Elongation factor G, domain IV OS088_RS00670 PF03144 Elongation factor Tu domain 2 OS088_RS00670 PF00009 Elongation factor Tu GTP binding domain OS088_RS00675 PF00009 Elongation factor Tu GTP binding domain OS088_RS00675 PF03144 Elongation factor Tu domain 2 OS088_RS00675 PF03143 Elongation factor Tu C-terminal domain OS088_RS00680 PF07687 Peptidase dimerisation domain OS088_RS00680 PF01546 Peptidase family M20/M25/M40 OS088_RS00685 PF00155 Aminotransferase class I and II OS088_RS00690 PF01965 DJ-1/PfpI family OS088_RS00695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OS088_RS00695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OS088_RS00700 PF01370 NAD dependent epimerase/dehydratase family OS088_RS00705 PF01063 Amino-transferase class IV OS088_RS00715 PF01712 Deoxynucleoside kinase OS088_RS00720 PF01712 Deoxynucleoside kinase OS088_RS00725 PF14437 MafB19-like deaminase OS088_RS00735 PF03358 NADPH-dependent FMN reductase OS088_RS00745 PF17961 Bacterial Ig domain OS088_RS00745 PF00746 LPXTG cell wall anchor motif OS088_RS00745 PF17210 SdrD B-like domain OS088_RS00745 PF10425 C-terminus of bacterial fibrinogen-binding adhesin OS088_RS00745 PF04650 YSIRK type signal peptide OS088_RS00750 PF00534 Glycosyl transferases group 1 OS088_RS00760 PF02649 Type I GTP cyclohydrolase folE2 OS088_RS00765 PF02585 GlcNAc-PI de-N-acetylase OS088_RS00775 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase OS088_RS00780 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family OS088_RS00785 PF01380 SIS domain OS088_RS00795 PF07690 Major Facilitator Superfamily OS088_RS00800 PF00501 AMP-binding enzyme OS088_RS00800 PF13193 AMP-binding enzyme C-terminal domain OS088_RS00805 PF02803 Thiolase, C-terminal domain OS088_RS00805 PF00108 Thiolase, N-terminal domain OS088_RS00820 PF17412 Family of unknown function OS088_RS00825 PF08543 Phosphomethylpyrimidine kinase OS088_RS00830 PF03167 Uracil DNA glycosylase superfamily OS088_RS00840 PF04241 Protein of unknown function (DUF423) OS088_RS00860 PF06778 Chlorite dismutase OS088_RS00865 PF01515 Phosphate acetyl/butaryl transferase OS088_RS00870 PF03099 Biotin/lipoate A/B protein ligase family OS088_RS00875 PF08544 GHMP kinases C terminal OS088_RS00875 PF00288 GHMP kinases N terminal domain OS088_RS00885 PF08544 GHMP kinases C terminal OS088_RS00885 PF00288 GHMP kinases N terminal domain OS088_RS00890 PF07293 Protein of unknown function (DUF1450) OS088_RS00895 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS00895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OS088_RS00965 PF01695 IstB-like ATP binding protein OS088_RS01000 PF00248 Aldo/keto reductase family OS088_RS01005 PF03358 NADPH-dependent FMN reductase OS088_RS01015 PF01966 HD domain OS088_RS01020 PF08741 YwhD family OS088_RS01025 PF08240 Alcohol dehydrogenase GroES-like domain OS088_RS01025 PF00107 Zinc-binding dehydrogenase OS088_RS01040 PF03485 Arginyl tRNA synthetase N terminal domain OS088_RS01040 PF05746 DALR anticodon binding domain OS088_RS01040 PF00750 tRNA synthetases class I (R) OS088_RS01050 PF01497 Periplasmic binding protein OS088_RS01055 PF01032 FecCD transport family OS088_RS01060 PF13419 Haloacid dehalogenase-like hydrolase OS088_RS01065 PF00561 alpha/beta hydrolase fold OS088_RS01080 PF12697 Alpha/beta hydrolase family OS088_RS01105 PF02899 Phage integrase, N-terminal SAM-like domain OS088_RS01105 PF00589 Phage integrase family OS088_RS01110 PF13244 Domain of unknown function (DUF4040) OS088_RS01110 PF00361 Proton-conducting membrane transporter OS088_RS01110 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OS088_RS01115 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter OS088_RS01120 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OS088_RS01125 PF00361 Proton-conducting membrane transporter OS088_RS01130 PF01899 Na+/H+ ion antiporter subunit OS088_RS01135 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) OS088_RS01140 PF03334 Na+/H+ antiporter subunit OS088_RS01145 PF00999 Sodium/hydrogen exchanger family OS088_RS01150 PF01297 Zinc-uptake complex component A periplasmic OS088_RS01155 PF00950 ABC 3 transport family OS088_RS01160 PF00005 ABC transporter OS088_RS01165 PF01325 Iron dependent repressor, N-terminal DNA binding domain OS088_RS01165 PF02742 Iron dependent repressor, metal binding and dimerisation domain OS088_RS01165 PF18357 Diphteria toxin repressor SH3 domain OS088_RS01175 PF03808 Glycosyl transferase WecB/TagA/CpsF family OS088_RS01180 PF00005 ABC transporter OS088_RS01185 PF01061 ABC-2 type transporter OS088_RS01190 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase OS088_RS01195 PF00535 Glycosyl transferase family 2 OS088_RS01200 PF01467 Cytidylyltransferase-like OS088_RS01205 PF07943 Penicillin-binding protein 5, C-terminal domain OS088_RS01205 PF00768 D-alanyl-D-alanine carboxypeptidase OS088_RS01210 PF00664 ABC transporter transmembrane region OS088_RS01210 PF00005 ABC transporter OS088_RS01215 PF07662 Na+ dependent nucleoside transporter C-terminus OS088_RS01215 PF01773 Na+ dependent nucleoside transporter N-terminus OS088_RS01225 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) OS088_RS01225 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 OS088_RS01230 PF00005 ABC transporter OS088_RS01235 PF01032 FecCD transport family OS088_RS01240 PF01032 FecCD transport family OS088_RS01245 PF02733 Dak1 domain OS088_RS01250 PF02734 DAK2 domain OS088_RS01285 PF01370 NAD dependent epimerase/dehydratase family OS088_RS01290 PF00072 Response regulator receiver domain OS088_RS01290 PF00486 Transcriptional regulatory protein, C terminal OS088_RS01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS01300 PF00005 ABC transporter OS088_RS01305 PF02687 FtsX-like permease family OS088_RS01310 PF01865 Protein of unknown function DUF47 OS088_RS01315 PF01384 Phosphate transporter family OS088_RS01320 PF05257 CHAP domain OS088_RS01320 PF01476 LysM domain OS088_RS01330 PF12833 Helix-turn-helix domain OS088_RS01330 PF02311 AraC-like ligand binding domain OS088_RS01340 PF01709 Transcriptional regulator OS088_RS01360 PF03466 LysR substrate binding domain OS088_RS01360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OS088_RS01365 PF07690 Major Facilitator Superfamily OS088_RS01370 PF04306 Protein of unknown function (DUF456) OS088_RS01395 PF13302 Acetyltransferase (GNAT) domain OS088_RS01400 PF03641 Possible lysine decarboxylase OS088_RS01405 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 OS088_RS01415 PF02673 Bacitracin resistance protein BacA OS088_RS01420 PF00005 ABC transporter OS088_RS01420 PF00664 ABC transporter transmembrane region OS088_RS01425 PF00664 ABC transporter transmembrane region OS088_RS01425 PF00005 ABC transporter OS088_RS01430 PF01047 MarR family OS088_RS01435 PF02492 CobW/HypB/UreG, nucleotide-binding domain OS088_RS01435 PF07683 Cobalamin synthesis protein cobW C-terminal domain OS088_RS01450 PF00939 Sodium:sulfate symporter transmembrane region OS088_RS01455 PF00875 DNA photolyase OS088_RS01455 PF03441 FAD binding domain of DNA photolyase OS088_RS01475 PF07690 Major Facilitator Superfamily OS088_RS01485 PF04073 Aminoacyl-tRNA editing domain OS088_RS01490 PF00455 DeoR C terminal sensor domain OS088_RS01490 PF08220 DeoR-like helix-turn-helix domain OS088_RS01495 PF00294 pfkB family carbohydrate kinase OS088_RS01500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OS088_RS01500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OS088_RS01505 PF01979 Amidohydrolase family OS088_RS01510 PF01595 Cyclin M transmembrane N-terminal domain OS088_RS01510 PF03471 Transporter associated domain OS088_RS01510 PF00571 CBS domain OS088_RS01515 PF00248 Aldo/keto reductase family OS088_RS01520 PF00535 Glycosyl transferase family 2 OS088_RS01525 PF00512 His Kinase A (phospho-acceptor) domain OS088_RS01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS01530 PF00072 Response regulator receiver domain OS088_RS01530 PF00486 Transcriptional regulatory protein, C terminal OS088_RS01550 PF04055 Radical SAM superfamily OS088_RS01555 PF01242 6-pyruvoyl tetrahydropterin synthase OS088_RS01560 PF06508 Queuosine biosynthesis protein QueC OS088_RS01565 PF00117 Glutamine amidotransferase class-I OS088_RS01565 PF02885 Glycosyl transferase family, helical bundle domain OS088_RS01565 PF00591 Glycosyl transferase family, a/b domain OS088_RS01570 PF04715 Anthranilate synthase component I, N terminal region OS088_RS01570 PF00425 chorismate binding enzyme OS088_RS01595 PF00884 Sulfatase OS088_RS01600 PF12848 ABC transporter OS088_RS01600 PF00005 ABC transporter OS088_RS01600 PF16326 ABC transporter C-terminal domain OS088_RS01605 PF00270 DEAD/DEAH box helicase OS088_RS01605 PF00271 Helicase conserved C-terminal domain OS088_RS01605 PF00570 HRDC domain OS088_RS01605 PF16124 RecQ zinc-binding OS088_RS01605 PF09382 RQC domain OS088_RS01610 PF00005 ABC transporter OS088_RS01610 PF00571 CBS domain OS088_RS01615 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS01620 PF00155 Aminotransferase class I and II OS088_RS01625 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) OS088_RS01630 PF00781 Diacylglycerol kinase catalytic domain OS088_RS01640 PF00854 POT family OS088_RS01650 PF14489 QueF-like protein OS088_RS01660 PF07972 NrdI Flavodoxin like OS088_RS01665 PF08343 Ribonucleotide reductase N-terminal OS088_RS01665 PF00317 Ribonucleotide reductase, all-alpha domain OS088_RS01665 PF02867 Ribonucleotide reductase, barrel domain OS088_RS01670 PF00268 Ribonucleotide reductase, small chain OS088_RS01675 PF01032 FecCD transport family OS088_RS01680 PF01032 FecCD transport family OS088_RS01685 PF00005 ABC transporter OS088_RS01690 PF01497 Periplasmic binding protein OS088_RS01700 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain OS088_RS01700 PF01565 FAD binding domain OS088_RS01720 PF02595 Glycerate kinase family OS088_RS01725 PF01546 Peptidase family M20/M25/M40 OS088_RS01725 PF07687 Peptidase dimerisation domain OS088_RS01740 PF00990 Diguanylate cyclase, GGDEF domain OS088_RS01740 PF07694 5TMR of 5TMR-LYT OS088_RS01745 PF00953 Glycosyl transferase family 4 OS088_RS01750 PF09186 Domain of unknown function (DUF1949) OS088_RS01750 PF01205 Uncharacterized protein family UPF0029 OS088_RS01755 PF02645 Uncharacterised protein, DegV family COG1307 OS088_RS01760 PF00271 Helicase conserved C-terminal domain OS088_RS01760 PF04851 Type III restriction enzyme, res subunit OS088_RS01770 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus OS088_RS01770 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein OS088_RS01775 PF02810 SEC-C motif OS088_RS01775 PF07517 SecA DEAD-like domain OS088_RS01775 PF01043 SecA preprotein cross-linking domain OS088_RS01775 PF07516 SecA Wing and Scaffold domain OS088_RS01795 PF05257 CHAP domain OS088_RS01795 PF01476 LysM domain OS088_RS01810 PF17757 UvrB interaction domain OS088_RS01810 PF12344 Ultra-violet resistance protein B OS088_RS01810 PF02151 UvrB/uvrC motif OS088_RS01810 PF00271 Helicase conserved C-terminal domain OS088_RS01810 PF04851 Type III restriction enzyme, res subunit OS088_RS01815 PF00005 ABC transporter OS088_RS01815 PF17755 UvrA DNA-binding domain OS088_RS01815 PF17760 UvrA interaction domain OS088_RS01820 PF07475 HPr Serine kinase C-terminal domain OS088_RS01820 PF02603 HPr Serine kinase N terminus OS088_RS01825 PF01790 Prolipoprotein diacylglyceryl transferase OS088_RS01830 PF14602 Hexapeptide repeat of succinyl-transferase OS088_RS01840 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS01845 PF03668 P-loop ATPase protein family OS088_RS01850 PF01933 Uncharacterised protein family UPF0052 OS088_RS01855 PF02650 WhiA C-terminal HTH domain OS088_RS01855 PF14527 WhiA LAGLIDADG-like domain OS088_RS01855 PF10298 WhiA N-terminal LAGLIDADG-like domain OS088_RS01885 PF01695 IstB-like ATP binding protein OS088_RS01890 PF00574 Clp protease OS088_RS01895 PF00390 Malic enzyme, N-terminal domain OS088_RS01895 PF03949 Malic enzyme, NAD binding domain OS088_RS01900 PF08338 Domain of unknown function (DUF1731) OS088_RS01900 PF01370 NAD dependent epimerase/dehydratase family OS088_RS01910 PF04198 Putative sugar-binding domain OS088_RS01915 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OS088_RS01915 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OS088_RS01920 PF00162 Phosphoglycerate kinase OS088_RS01925 PF00121 Triosephosphate isomerase OS088_RS01930 PF06415 BPG-independent PGAM N-terminus (iPGM_N) OS088_RS01930 PF01676 Metalloenzyme superfamily OS088_RS01935 PF00113 Enolase, C-terminal TIM barrel domain OS088_RS01935 PF03952 Enolase, N-terminal domain OS088_RS01945 PF03840 Preprotein translocase SecG subunit OS088_RS01950 PF12146 Serine aminopeptidase, S33 OS088_RS01955 PF17876 Cold shock domain OS088_RS01955 PF08206 Ribonuclease B OB domain OS088_RS01955 PF00575 S1 RNA binding domain OS088_RS01955 PF00773 RNB domain OS088_RS01960 PF01668 SmpB protein OS088_RS02000 PF00746 LPXTG cell wall anchor motif OS088_RS02000 PF10425 C-terminus of bacterial fibrinogen-binding adhesin OS088_RS02000 PF04650 YSIRK type signal peptide OS088_RS02000 PF17961 Bacterial Ig domain OS088_RS02000 PF00746 LPXTG cell wall anchor motif OS088_RS02000 PF10425 C-terminus of bacterial fibrinogen-binding adhesin OS088_RS02000 PF04650 YSIRK type signal peptide OS088_RS02000 PF17961 Bacterial Ig domain OS088_RS02020 PF00565 Staphylococcal nuclease homologue OS088_RS02025 PF00313 'Cold-shock' DNA-binding domain OS088_RS02065 PF00300 Histidine phosphatase superfamily (branch 1) OS088_RS02070 PF01810 LysE type translocator OS088_RS02080 PF02566 OsmC-like protein OS088_RS02085 PF01487 Type I 3-dehydroquinase OS088_RS02095 PF00085 Thioredoxin OS088_RS02100 PF03960 ArsC family OS088_RS02105 PF01597 Glycine cleavage H-protein OS088_RS02110 PF09234 Domain of unknown function (DUF1963) OS088_RS02115 PF01751 Toprim domain OS088_RS02125 PF00005 ABC transporter OS088_RS02125 PF09383 NIL domain OS088_RS02130 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS02135 PF03180 NLPA lipoprotein OS088_RS02240 PF10668 Phage terminase small subunit OS088_RS02240 PF03592 Terminase small subunit OS088_RS02265 PF05532 CsbD-like OS088_RS02275 PF00005 ABC transporter OS088_RS02280 PF01458 Uncharacterized protein family (UPF0051) OS088_RS02285 PF00266 Aminotransferase class-V OS088_RS02290 PF01592 NifU-like N terminal domain OS088_RS02295 PF01458 Uncharacterized protein family (UPF0051) OS088_RS02310 PF03471 Transporter associated domain OS088_RS02310 PF01595 Cyclin M transmembrane N-terminal domain OS088_RS02310 PF00571 CBS domain OS088_RS02315 PF03060 Nitronate monooxygenase OS088_RS02320 PF01904 Protein of unknown function DUF72 OS088_RS02325 PF01925 Sulfite exporter TauE/SafE OS088_RS02335 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family OS088_RS02335 PF04055 Radical SAM superfamily OS088_RS02340 PF06265 Protein of unknown function (DUF1027) OS088_RS02350 PF01934 Protein of unknown function DUF86 OS088_RS02355 PF13344 Haloacid dehalogenase-like hydrolase OS088_RS02360 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OS088_RS02360 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OS088_RS02375 PF00501 AMP-binding enzyme OS088_RS02375 PF13193 AMP-binding enzyme C-terminal domain OS088_RS02380 PF03062 MBOAT, membrane-bound O-acyltransferase family OS088_RS02385 PF00550 Phosphopantetheine attachment site OS088_RS02390 PF04914 DltD protein OS088_RS02395 PF01106 NifU-like domain OS088_RS02400 PF07315 Protein of unknown function (DUF1462) OS088_RS02405 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS02410 PF07293 Protein of unknown function (DUF1450) OS088_RS02415 PF01521 Iron-sulphur cluster biosynthesis OS088_RS02420 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS02425 PF00883 Cytosol aminopeptidase family, catalytic domain OS088_RS02425 PF02789 Cytosol aminopeptidase family, N-terminal domain OS088_RS02430 PF13726 Na+-H+ antiporter family OS088_RS02430 PF03553 Na+/H+ antiporter family OS088_RS02435 PF03061 Thioesterase superfamily OS088_RS02445 PF03334 Na+/H+ antiporter subunit OS088_RS02450 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) OS088_RS02455 PF01899 Na+/H+ ion antiporter subunit OS088_RS02460 PF00361 Proton-conducting membrane transporter OS088_RS02465 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L OS088_RS02470 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter OS088_RS02475 PF00361 Proton-conducting membrane transporter OS088_RS02475 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus OS088_RS02475 PF13244 Domain of unknown function (DUF4040) OS088_RS02485 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD OS088_RS02490 PF00575 S1 RNA binding domain OS088_RS02495 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OS088_RS02500 PF00202 Aminotransferase class-III OS088_RS02505 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase OS088_RS02505 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain OS088_RS02510 PF03009 Glycerophosphoryl diester phosphodiesterase family OS088_RS02515 PF14698 Argininosuccinate lyase C-terminal OS088_RS02515 PF00206 Lyase OS088_RS02520 PF00764 Arginosuccinate synthase OS088_RS02525 PF00342 Phosphoglucose isomerase OS088_RS02530 PF09335 SNARE associated Golgi protein OS088_RS02535 PF10502 Signal peptidase, peptidase S26 OS088_RS02540 PF10502 Signal peptidase, peptidase S26 OS088_RS02545 PF12705 PD-(D/E)XK nuclease superfamily OS088_RS02545 PF13361 UvrD-like helicase C-terminal domain OS088_RS02550 PF12705 PD-(D/E)XK nuclease superfamily OS088_RS02550 PF00580 UvrD/REP helicase N-terminal domain OS088_RS02550 PF13361 UvrD-like helicase C-terminal domain OS088_RS02555 PF01557 Fumarylacetoacetate (FAA) hydrolase family OS088_RS02560 PF07457 Protein of unknown function (DUF1516) OS088_RS02565 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS02565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OS088_RS02575 PF01883 Iron-sulfur cluster assembly protein OS088_RS02580 PF01757 Acyltransferase family OS088_RS02590 PF07724 AAA domain (Cdc48 subfamily) OS088_RS02590 PF17871 AAA lid domain OS088_RS02590 PF02861 Clp amino terminal domain, pathogenicity island component OS088_RS02590 PF10431 C-terminal, D2-small domain, of ClpB protein OS088_RS02590 PF00004 ATPase family associated with various cellular activities (AAA) OS088_RS02600 PF01161 Phosphatidylethanolamine-binding protein OS088_RS02605 PF03642 MAP domain OS088_RS02615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III OS088_RS02615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal OS088_RS02620 PF02801 Beta-ketoacyl synthase, C-terminal domain OS088_RS02620 PF00109 Beta-ketoacyl synthase, N-terminal domain OS088_RS02630 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS02635 PF12911 N-terminal TM domain of oligopeptide transport permease C OS088_RS02635 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS02640 PF00005 ABC transporter OS088_RS02640 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OS088_RS02645 PF00005 ABC transporter OS088_RS02645 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OS088_RS02650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle OS088_RS02655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle OS088_RS02660 PF00005 ABC transporter OS088_RS02660 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OS088_RS02665 PF00005 ABC transporter OS088_RS02665 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OS088_RS02675 PF12911 N-terminal TM domain of oligopeptide transport permease C OS088_RS02675 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS02685 PF00579 tRNA synthetases class I (W and Y) OS088_RS02690 PF03960 ArsC family OS088_RS02695 PF05389 Negative regulator of genetic competence (MecA) OS088_RS02700 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) OS088_RS02715 PF08439 Oligopeptidase F OS088_RS02715 PF01432 Peptidase family M3 OS088_RS02725 PF01152 Bacterial-like globin OS088_RS02740 PF04607 Region found in RelA / SpoT proteins OS088_RS02745 PF01513 ATP-NAD kinase OS088_RS02750 PF00849 RNA pseudouridylate synthase OS088_RS02755 PF00571 CBS domain OS088_RS02755 PF01769 Divalent cation transporter OS088_RS02755 PF03448 MgtE intracellular N domain OS088_RS02760 PF00999 Sodium/hydrogen exchanger family OS088_RS02760 PF02080 TrkA-C domain OS088_RS02760 PF02254 TrkA-N domain OS088_RS02770 PF01594 AI-2E family transporter OS088_RS02775 PF01235 Sodium:alanine symporter family OS088_RS02795 PF07690 Major Facilitator Superfamily OS088_RS02800 PF04101 Glycosyltransferase family 28 C-terminal domain OS088_RS02800 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase OS088_RS02805 PF02875 Mur ligase family, glutamate ligase domain OS088_RS02805 PF08245 Mur ligase middle domain OS088_RS02805 PF01225 Mur ligase family, catalytic domain OS088_RS02815 PF00009 Elongation factor Tu GTP binding domain OS088_RS02815 PF03144 Elongation factor Tu domain 2 OS088_RS02815 PF16658 Class II release factor RF3, C-terminal domain OS088_RS02820 PF03741 Integral membrane protein TerC family OS088_RS02825 PF13180 PDZ domain OS088_RS02830 PF02386 Cation transport protein OS088_RS02835 PF02872 5'-nucleotidase, C-terminal domain OS088_RS02835 PF00149 Calcineurin-like phosphoesterase OS088_RS02850 PF06338 ComK protein OS088_RS02860 PF03099 Biotin/lipoate A/B protein ligase family OS088_RS02860 PF10437 Bacterial lipoate protein ligase C-terminus OS088_RS02865 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) OS088_RS02900 PF00665 Integrase core domain OS088_RS02900 PF13936 Helix-turn-helix domain OS088_RS02915 PF00534 Glycosyl transferases group 1 OS088_RS02935 PF05154 TM2 domain OS088_RS02940 PF00583 Acetyltransferase (GNAT) family OS088_RS02945 PF01040 UbiA prenyltransferase family OS088_RS02955 PF00425 chorismate binding enzyme OS088_RS02960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OS088_RS02960 PF16582 Middle domain of thiamine pyrophosphate OS088_RS02960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OS088_RS02965 PF00561 alpha/beta hydrolase fold OS088_RS02970 PF00378 Enoyl-CoA hydratase/isomerase OS088_RS02975 PF09023 Staphostatin B OS088_RS02980 PF05543 Staphopain peptidase C47 OS088_RS02980 PF14731 Staphopain proregion OS088_RS02995 PF01757 Acyltransferase family OS088_RS03010 PF13457 GW (Gly-Tryp) dipeptide domain OS088_RS03010 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase OS088_RS03015 PF13673 Acetyltransferase (GNAT) domain OS088_RS03020 PF10804 Protein of unknown function (DUF2538) OS088_RS03025 PF03816 Cell envelope-related transcriptional attenuator domain OS088_RS03030 PF00144 Beta-lactamase OS088_RS03035 PF03626 Prokaryotic Cytochrome C oxidase subunit IV OS088_RS03040 PF00510 Cytochrome c oxidase subunit III OS088_RS03045 PF00115 Cytochrome C and Quinol oxidase polypeptide I OS088_RS03050 PF00116 Cytochrome C oxidase subunit II, periplasmic domain OS088_RS03050 PF02790 Cytochrome C oxidase subunit II, transmembrane domain OS088_RS03065 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain OS088_RS03065 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain OS088_RS03070 PF00731 AIR carboxylase OS088_RS03075 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain OS088_RS03075 PF02222 ATP-grasp domain OS088_RS03075 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OS088_RS03080 PF01259 SAICAR synthetase OS088_RS03085 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase OS088_RS03095 PF02769 AIR synthase related protein, C-terminal domain OS088_RS03095 PF00586 AIR synthase related protein, N-terminal domain OS088_RS03095 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain OS088_RS03100 PF13537 Glutamine amidotransferase domain OS088_RS03100 PF00156 Phosphoribosyl transferase domain OS088_RS03105 PF00586 AIR synthase related protein, N-terminal domain OS088_RS03105 PF02769 AIR synthase related protein, C-terminal domain OS088_RS03110 PF00551 Formyl transferase OS088_RS03115 PF01808 AICARFT/IMPCHase bienzyme OS088_RS03115 PF02142 MGS-like domain OS088_RS03120 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain OS088_RS03120 PF02843 Phosphoribosylglycinamide synthetase, C domain OS088_RS03120 PF02844 Phosphoribosylglycinamide synthetase, N domain OS088_RS03125 PF02361 Cobalt transport protein OS088_RS03130 PF00005 ABC transporter OS088_RS03135 PF09819 ABC-type cobalt transport system, permease component OS088_RS03150 PF10672 S-adenosylmethionine-dependent methyltransferase OS088_RS03150 PF17785 PUA-like domain OS088_RS03160 PF00381 PTS HPr component phosphorylation site OS088_RS03165 PF02896 PEP-utilising enzyme, TIM barrel domain OS088_RS03165 PF00391 PEP-utilising enzyme, mobile domain OS088_RS03165 PF05524 PEP-utilising enzyme, N-terminal OS088_RS03170 PF00462 Glutaredoxin OS088_RS03175 PF01654 Cytochrome bd terminal oxidase subunit I OS088_RS03180 PF02322 Cytochrome bd terminal oxidase subunit II OS088_RS03185 PF02254 TrkA-N domain OS088_RS03185 PF02080 TrkA-C domain OS088_RS03190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain OS088_RS03190 PF17770 Ribonuclease J C-terminal domain OS088_RS03190 PF00753 Metallo-beta-lactamase superfamily OS088_RS03195 PF07288 Protein of unknown function (DUF1447) OS088_RS03205 PF01327 Polypeptide deformylase OS088_RS03215 PF00676 Dehydrogenase E1 component OS088_RS03220 PF02779 Transketolase, pyrimidine binding domain OS088_RS03220 PF02780 Transketolase, C-terminal domain OS088_RS03225 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OS088_RS03225 PF00364 Biotin-requiring enzyme OS088_RS03225 PF02817 e3 binding domain OS088_RS03230 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS03230 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OS088_RS03240 PF05256 Uncharacterised protein family (UPF0223) OS088_RS03250 PF00005 ABC transporter OS088_RS03250 PF08402 TOBE domain OS088_RS03255 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS03260 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS03265 PF13416 Bacterial extracellular solute-binding protein OS088_RS03280 PF01566 Natural resistance-associated macrophage protein OS088_RS03285 PF06335 Protein of unknown function (DUF1054) OS088_RS03290 PF00459 Inositol monophosphatase family OS088_RS03300 PF00679 Elongation factor G C-terminus OS088_RS03300 PF03144 Elongation factor Tu domain 2 OS088_RS03300 PF00009 Elongation factor Tu GTP binding domain OS088_RS03300 PF14492 Elongation Factor G, domain II OS088_RS03315 PF07408 Protein of unknown function (DUF1507) OS088_RS03320 PF01098 Cell cycle protein OS088_RS03325 PF02785 Biotin carboxylase C-terminal domain OS088_RS03325 PF00289 Biotin carboxylase, N-terminal domain OS088_RS03325 PF00364 Biotin-requiring enzyme OS088_RS03325 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OS088_RS03325 PF00682 HMGL-like OS088_RS03325 PF02436 Conserved carboxylase domain OS088_RS03330 PF02628 Cytochrome oxidase assembly protein OS088_RS03335 PF01040 UbiA prenyltransferase family OS088_RS03350 PF06133 Control of competence regulator ComK, YlbF/YmcA OS088_RS03355 PF03009 Glycerophosphoryl diester phosphodiesterase family OS088_RS03360 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) OS088_RS03375 PF01467 Cytidylyltransferase-like OS088_RS03380 PF05636 HIGH Nucleotidyl Transferase OS088_RS03390 PF01783 Ribosomal L32p protein family OS088_RS03400 PF04650 YSIRK type signal peptide OS088_RS03400 PF05031 Iron Transport-associated domain OS088_RS03400 PF00746 LPXTG cell wall anchor motif OS088_RS03405 PF00746 LPXTG cell wall anchor motif OS088_RS03405 PF05031 Iron Transport-associated domain OS088_RS03410 PF05031 Iron Transport-associated domain OS088_RS03420 PF01497 Periplasmic binding protein OS088_RS03425 PF01032 FecCD transport family OS088_RS03430 PF04203 Sortase domain OS088_RS03435 PF03992 Antibiotic biosynthesis monooxygenase OS088_RS03445 PF00588 SpoU rRNA Methylase family OS088_RS03445 PF08032 RNA 2'-O ribose methyltransferase substrate binding OS088_RS03450 PF01409 tRNA synthetases class II core domain (F) OS088_RS03450 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain OS088_RS03455 PF03484 tRNA synthetase B5 domain OS088_RS03455 PF03147 Ferredoxin-fold anticodon binding domain OS088_RS03455 PF01588 Putative tRNA binding domain OS088_RS03455 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain OS088_RS03455 PF03483 B3/4 domain OS088_RS03460 PF11858 Domain of unknown function (DUF3378) OS088_RS03460 PF01351 Ribonuclease HII OS088_RS03475 PF14791 DNA polymerase beta thumb OS088_RS03475 PF02811 PHP domain OS088_RS03475 PF14716 Helix-hairpin-helix domain OS088_RS03480 PF00488 MutS domain V OS088_RS03480 PF01713 Smr domain OS088_RS03485 PF00085 Thioredoxin OS088_RS03495 PF01541 GIY-YIG catalytic domain OS088_RS03495 PF02151 UvrB/uvrC motif OS088_RS03495 PF08459 UvrC Helix-hairpin-helix N-terminal OS088_RS03500 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit OS088_RS03505 PF02910 Fumarate reductase flavoprotein C-term OS088_RS03505 PF00890 FAD binding domain OS088_RS03510 PF13183 4Fe-4S dicluster domain OS088_RS03510 PF13085 2Fe-2S iron-sulfur cluster binding domain OS088_RS03515 PF01177 Asp/Glu/Hydantoin racemase OS088_RS03520 PF01725 Ham1 family OS088_RS03525 PF12850 Calcineurin-like phosphoesterase superfamily domain OS088_RS03545 PF16104 Formyl peptide receptor-like 1 inhibitory protein OS088_RS03555 PF12199 Extracellular fibrinogen binding protein C terminal OS088_RS03560 PF11546 Staphylococcal complement inhibitor SCIN OS088_RS03575 PF07968 Leukocidin/Hemolysin toxin family OS088_RS03595 PF01695 IstB-like ATP binding protein OS088_RS03600 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS03605 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS03610 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS03615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OS088_RS03615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OS088_RS03620 PF00696 Amino acid kinase family OS088_RS03625 PF03606 C4-dicarboxylate anaerobic carrier OS088_RS03650 PF05480 Staphylococcus haemolytic protein OS088_RS03655 PF05480 Staphylococcus haemolytic protein OS088_RS03660 PF13419 Haloacid dehalogenase-like hydrolase OS088_RS03670 PF10079 Bacillithiol biosynthesis BshC OS088_RS03675 PF02381 MraZ protein, putative antitoxin-like OS088_RS03680 PF01795 MraW methylase family OS088_RS03685 PF04977 Septum formation initiator OS088_RS03690 PF03793 PASTA domain OS088_RS03690 PF03717 Penicillin-binding Protein dimerisation domain OS088_RS03690 PF00905 Penicillin binding protein transpeptidase domain OS088_RS03695 PF00953 Glycosyl transferase family 4 OS088_RS03700 PF02875 Mur ligase family, glutamate ligase domain OS088_RS03700 PF08245 Mur ligase middle domain OS088_RS03705 PF03799 Cell division protein FtsQ OS088_RS03705 PF08478 POTRA domain, FtsQ-type OS088_RS03710 PF02491 SHS2 domain inserted in FTSA OS088_RS03715 PF00091 Tubulin/FtsZ family, GTPase domain OS088_RS03715 PF12327 FtsZ family, C-terminal domain OS088_RS03720 PF02578 Multi-copper polyphenol oxidoreductase laccase OS088_RS03725 PF01168 Alanine racemase, N-terminal domain OS088_RS03730 PF04472 Cell division protein SepF OS088_RS03735 PF02325 YGGT family OS088_RS03740 PF01479 S4 domain OS088_RS03740 PF17774 Putative RNA-binding domain in YlmH OS088_RS03745 PF05103 DivIVA protein OS088_RS03750 PF08264 Anticodon-binding domain of tRNA OS088_RS03750 PF06827 Zinc finger found in FPG and IleRS OS088_RS03750 PF00133 tRNA synthetases class I (I, L, M and V) OS088_RS03755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OS088_RS03765 PF01252 Signal peptidase (SPase) II OS088_RS03770 PF00849 RNA pseudouridylate synthase OS088_RS03770 PF01479 S4 domain OS088_RS03775 PF00156 Phosphoribosyl transferase domain OS088_RS03780 PF00860 Permease family OS088_RS03785 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OS088_RS03785 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OS088_RS03790 PF01979 Amidohydrolase family OS088_RS03795 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain OS088_RS03795 PF00117 Glutamine amidotransferase class-I OS088_RS03800 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OS088_RS03800 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain OS088_RS03800 PF02142 MGS-like domain OS088_RS03805 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family OS088_RS03810 PF00156 Phosphoribosyl transferase domain OS088_RS03825 PF05670 NFACT protein RNA binding domain OS088_RS03830 PF00625 Guanylate kinase OS088_RS03835 PF01192 RNA polymerase Rpb6 OS088_RS03840 PF04127 DNA / pantothenate metabolism flavoprotein OS088_RS03840 PF02441 Flavoprotein OS088_RS03845 PF18319 PriA DNA helicase Cys-rich region (CRR) domain OS088_RS03845 PF04851 Type III restriction enzyme, res subunit OS088_RS03845 PF17764 3′ DNA-binding domain (3′BD) OS088_RS03845 PF00271 Helicase conserved C-terminal domain OS088_RS03845 PF18074 Primosomal protein N C-terminal domain OS088_RS03855 PF05154 TM2 domain OS088_RS03860 PF01327 Polypeptide deformylase OS088_RS03865 PF00551 Formyl transferase OS088_RS03865 PF02911 Formyl transferase, C-terminal domain OS088_RS03870 PF01189 16S rRNA methyltransferase RsmB/F OS088_RS03870 PF01029 NusB family OS088_RS03875 PF04055 Radical SAM superfamily OS088_RS03885 PF00069 Protein kinase domain OS088_RS03885 PF03793 PASTA domain OS088_RS03890 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) OS088_RS03895 PF03193 RsgA GTPase OS088_RS03895 PF16745 RsgA N-terminal domain OS088_RS03900 PF00834 Ribulose-phosphate 3 epimerase family OS088_RS03910 PF00830 Ribosomal L28 family OS088_RS03915 PF03780 Asp23 family, cell envelope-related function OS088_RS03920 PF13684 Dihydroxyacetone kinase family OS088_RS03920 PF02734 DAK2 domain OS088_RS03925 PF00270 DEAD/DEAH box helicase OS088_RS03925 PF00271 Helicase conserved C-terminal domain OS088_RS03925 PF17191 RecG wedge domain OS088_RS03930 PF03061 Thioesterase superfamily OS088_RS03935 PF02504 Fatty acid synthesis protein OS088_RS03940 PF00698 Acyl transferase domain OS088_RS03950 PF00550 Phosphopantetheine attachment site OS088_RS03955 PF14622 Ribonuclease-III-like OS088_RS03955 PF00035 Double-stranded RNA binding motif OS088_RS03960 PF02463 RecF/RecN/SMC N terminal domain OS088_RS03960 PF06470 SMC proteins Flexible Hinge Domain OS088_RS03965 PF00448 SRP54-type protein, GTPase domain OS088_RS03965 PF02881 SRP54-type protein, helical bundle domain OS088_RS03970 PF04297 Putative helix-turn-helix protein, YlxM / p13 like OS088_RS03975 PF00448 SRP54-type protein, GTPase domain OS088_RS03975 PF02881 SRP54-type protein, helical bundle domain OS088_RS03975 PF02978 Signal peptide binding domain OS088_RS03980 PF02796 Helix-turn-helix domain of resolvase OS088_RS03980 PF00239 Resolvase, N terminal domain OS088_RS04055 PF00436 Single-strand binding protein family OS088_RS04075 PF01695 IstB-like ATP binding protein OS088_RS04315 PF05257 CHAP domain OS088_RS04315 PF01520 N-acetylmuramoyl-L-alanine amidase OS088_RS04315 PF08460 Bacterial SH3 domain OS088_RS04330 PF00886 Ribosomal protein S16 OS088_RS04335 PF05239 PRC-barrel domain OS088_RS04335 PF01782 RimM N-terminal domain OS088_RS04340 PF01746 tRNA (Guanine-1)-methyltransferase OS088_RS04345 PF01245 Ribosomal protein L19 OS088_RS04355 PF01926 50S ribosome-binding GTPase OS088_RS04360 PF01351 Ribonuclease HII OS088_RS04365 PF08442 ATP-grasp domain OS088_RS04365 PF00549 CoA-ligase OS088_RS04370 PF02629 CoA binding domain OS088_RS04370 PF00549 CoA-ligase OS088_RS04380 PF02388 FemAB family OS088_RS04385 PF02481 DNA recombination-mediator protein A OS088_RS04390 PF01131 DNA topoisomerase OS088_RS04390 PF01751 Toprim domain OS088_RS04390 PF01396 Topoisomerase DNA binding C4 zinc finger OS088_RS04395 PF01134 Glucose inhibited division protein A OS088_RS04400 PF02899 Phage integrase, N-terminal SAM-like domain OS088_RS04400 PF00589 Phage integrase family OS088_RS04405 PF00227 Proteasome subunit OS088_RS04410 PF07724 AAA domain (Cdc48 subfamily) OS088_RS04410 PF10431 C-terminal, D2-small domain, of ClpB protein OS088_RS04410 PF00004 ATPase family associated with various cellular activities (AAA) OS088_RS04415 PF06018 CodY GAF-like domain OS088_RS04415 PF08222 CodY helix-turn-helix domain OS088_RS04425 PF00318 Ribosomal protein S2 OS088_RS04435 PF00889 Elongation factor TS OS088_RS04440 PF00696 Amino acid kinase family OS088_RS04445 PF01765 Ribosome recycling factor OS088_RS04450 PF01255 Putative undecaprenyl diphosphate synthase OS088_RS04460 PF13180 PDZ domain OS088_RS04460 PF02163 Peptidase family M50 OS088_RS04465 PF03129 Anticodon binding domain OS088_RS04465 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OS088_RS04465 PF04073 Aminoacyl-tRNA editing domain OS088_RS04470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OS088_RS04470 PF14480 DNA polymerase III polC-type N-terminus I OS088_RS04470 PF07733 Bacterial DNA polymerase III alpha NTPase domain OS088_RS04470 PF02811 PHP domain OS088_RS04470 PF00929 Exonuclease OS088_RS04470 PF11490 DNA polymerase III polC-type N-terminus II OS088_RS04470 PF14579 Helix-hairpin-helix motif OS088_RS04475 PF17384 RimP C-terminal SH3 domain OS088_RS04475 PF02576 RimP N-terminal domain OS088_RS04480 PF08529 NusA N-terminal domain OS088_RS04480 PF00575 S1 RNA binding domain OS088_RS04480 PF13184 NusA-like KH domain OS088_RS04485 PF04296 Protein of unknown function (DUF448) OS088_RS04490 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family OS088_RS04495 PF00009 Elongation factor Tu GTP binding domain OS088_RS04495 PF11987 Translation-initiation factor 2 OS088_RS04495 PF04760 Translation initiation factor IF-2, N-terminal region OS088_RS04500 PF02033 Ribosome-binding factor A OS088_RS04505 PF16198 tRNA pseudouridylate synthase B C-terminal domain OS088_RS04505 PF01509 TruB family pseudouridylate synthase (N terminal domain) OS088_RS04510 PF01687 Riboflavin kinase OS088_RS04510 PF06574 FAD synthetase OS088_RS04515 PF00312 Ribosomal protein S15 OS088_RS04520 PF01138 3' exoribonuclease family, domain 1 OS088_RS04520 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain OS088_RS04520 PF03725 3' exoribonuclease family, domain 2 OS088_RS04520 PF00575 S1 RNA binding domain OS088_RS04520 PF00013 KH domain OS088_RS04525 PF17770 Ribonuclease J C-terminal domain OS088_RS04525 PF00753 Metallo-beta-lactamase superfamily OS088_RS04525 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain OS088_RS04530 PF01580 FtsK/SpoIIIE family OS088_RS04530 PF09397 Ftsk gamma domain OS088_RS04530 PF17854 FtsK alpha domain OS088_RS04535 PF00392 Bacterial regulatory proteins, gntR family OS088_RS04535 PF07702 UTRA domain OS088_RS04540 PF05193 Peptidase M16 inactive domain OS088_RS04545 PF05193 Peptidase M16 inactive domain OS088_RS04545 PF00675 Insulinase (Peptidase family M16) OS088_RS04555 PF11868 Protein of unknown function (DUF3388) OS088_RS04565 PF01066 CDP-alcohol phosphatidyltransferase OS088_RS04570 PF02464 Competence-damaged protein OS088_RS04570 PF00994 Probable molybdopterin binding domain OS088_RS04570 PF18146 Damage-inducible protein CinA KH domain OS088_RS04575 PF00154 recA bacterial DNA recombination protein OS088_RS04580 PF01966 HD domain OS088_RS04580 PF00013 KH domain OS088_RS04580 PF12072 Domain of unknown function (DUF3552) OS088_RS04595 PF13277 YmdB-like protein OS088_RS04600 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II OS088_RS04600 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase OS088_RS04600 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg OS088_RS04605 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OS088_RS04610 PF01910 Thiamine-binding protein OS088_RS04615 PF04055 Radical SAM superfamily OS088_RS04615 PF01938 TRAM domain OS088_RS04615 PF00919 Uncharacterized protein family UPF0004 OS088_RS04630 PF00488 MutS domain V OS088_RS04630 PF05190 MutS family domain IV OS088_RS04630 PF05188 MutS domain II OS088_RS04630 PF01624 MutS domain I OS088_RS04630 PF05192 MutS domain III OS088_RS04635 PF01119 DNA mismatch repair protein, C-terminal domain OS088_RS04635 PF08676 MutL C terminal dimerisation domain OS088_RS04640 PF04309 Glycerol-3-phosphate responsive antiterminator OS088_RS04645 PF00230 Major intrinsic protein OS088_RS04650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OS088_RS04650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OS088_RS04655 PF01266 FAD dependent oxidoreductase OS088_RS04655 PF16901 C-terminal domain of alpha-glycerophosphate oxidase OS088_RS04670 PF17209 Hfq protein OS088_RS04675 PF00255 Glutathione peroxidase OS088_RS04680 PF01926 50S ribosome-binding GTPase OS088_RS04680 PF16360 GTP-binding GTPase Middle Region OS088_RS04680 PF13167 GTP-binding GTPase N-terminal OS088_RS04685 PF06838 Methionine gamma-lyase OS088_RS04690 PF13411 MerR HTH family regulatory protein OS088_RS04695 PF00120 Glutamine synthetase, catalytic domain OS088_RS04695 PF03951 Glutamine synthetase, beta-Grasp domain OS088_RS04700 PF14659 Phage integrase, N-terminal SAM-like domain OS088_RS04700 PF00589 Phage integrase family OS088_RS04775 PF01695 IstB-like ATP binding protein OS088_RS04790 PF00665 Integrase core domain OS088_RS04795 PF01695 IstB-like ATP binding protein OS088_RS04820 PF13392 HNH endonuclease OS088_RS04825 PF08241 Methyltransferase domain OS088_RS04830 PF01555 DNA methylase OS088_RS04875 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) OS088_RS04880 PF01348 Type II intron maturase OS088_RS04880 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) OS088_RS04910 PF13091 PLD-like domain OS088_RS04910 PF13396 Phospholipase_D-nuclease N-terminal OS088_RS04915 PF00005 ABC transporter OS088_RS04930 PF00196 Bacterial regulatory proteins, luxR family OS088_RS04930 PF00072 Response regulator receiver domain OS088_RS04940 PF00565 Staphylococcal nuclease homologue OS088_RS04955 PF00696 Amino acid kinase family OS088_RS04955 PF13840 ACT domain OS088_RS04960 PF01842 ACT domain OS088_RS04960 PF00742 Homoserine dehydrogenase OS088_RS04960 PF03447 Homoserine dehydrogenase, NAD binding domain OS088_RS04965 PF00291 Pyridoxal-phosphate dependent enzyme OS088_RS04970 PF00288 GHMP kinases N terminal domain OS088_RS04970 PF08544 GHMP kinases C terminal OS088_RS04990 PF00324 Amino acid permease OS088_RS04995 PF00199 Catalase OS088_RS04995 PF06628 Catalase-related immune-responsive OS088_RS05000 PF00471 Ribosomal protein L33 OS088_RS05005 PF00253 Ribosomal protein S14p/S29e OS088_RS05010 PF00478 IMP dehydrogenase / GMP reductase domain OS088_RS05020 PF00188 Cysteine-rich secretory protein family OS088_RS05025 PF01726 LexA DNA binding domain OS088_RS05025 PF00717 Peptidase S24-like OS088_RS05035 PF05979 Bacterial protein of unknown function (DUF896) OS088_RS05040 PF02779 Transketolase, pyrimidine binding domain OS088_RS05040 PF02780 Transketolase, C-terminal domain OS088_RS05040 PF00456 Transketolase, thiamine diphosphate binding domain OS088_RS05045 PF03672 Uncharacterised protein family (UPF0154) OS088_RS05055 PF07301 Protein of unknown function (DUF1453) OS088_RS05060 PF00149 Calcineurin-like phosphoesterase OS088_RS05060 PF12320 Type 5 capsule protein repressor C-terminal domain OS088_RS05065 PF13476 AAA domain OS088_RS05070 PF01741 Large-conductance mechanosensitive channel, MscL OS088_RS05075 PF02028 BCCT, betaine/carnitine/choline family transporter OS088_RS05080 PF00665 Integrase core domain OS088_RS05085 PF01695 IstB-like ATP binding protein OS088_RS05090 PF00330 Aconitase family (aconitate hydratase) OS088_RS05090 PF00694 Aconitase C-terminal domain OS088_RS05095 PF03061 Thioesterase superfamily OS088_RS05105 PF02660 Glycerol-3-phosphate acyltransferase OS088_RS05110 PF00204 DNA gyrase B OS088_RS05110 PF00986 DNA gyrase B subunit, carboxyl terminus OS088_RS05110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS05110 PF01751 Toprim domain OS088_RS05115 PF03989 DNA gyrase C-terminal domain, beta-propeller OS088_RS05115 PF00521 DNA gyrase/topoisomerase IV, subunit A OS088_RS05120 PF01235 Sodium:alanine symporter family OS088_RS05125 PF00874 PRD domain OS088_RS05125 PF03123 CAT RNA binding domain OS088_RS05135 PF01594 AI-2E family transporter OS088_RS05140 PF09924 Uncharacterised conserved protein (DUF2156) OS088_RS05140 PF03706 Lysylphosphatidylglycerol synthase TM region OS088_RS05145 PF01625 Peptide methionine sulfoxide reductase OS088_RS05150 PF03816 Cell envelope-related transcriptional attenuator domain OS088_RS05155 PF01361 Tautomerase enzyme OS088_RS05160 PF11799 impB/mucB/samB family C-terminal domain OS088_RS05160 PF00817 impB/mucB/samB family OS088_RS05160 PF11798 IMS family HHH motif OS088_RS05165 PF02153 Prephenate dehydrogenase OS088_RS05170 PF05343 M42 glutamyl aminopeptidase OS088_RS05175 PF04715 Anthranilate synthase component I, N terminal region OS088_RS05175 PF00425 chorismate binding enzyme OS088_RS05180 PF00117 Glutamine amidotransferase class-I OS088_RS05185 PF00591 Glycosyl transferase family, a/b domain OS088_RS05190 PF00218 Indole-3-glycerol phosphate synthase OS088_RS05195 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase OS088_RS05200 PF00291 Pyridoxal-phosphate dependent enzyme OS088_RS05205 PF00290 Tryptophan synthase alpha chain OS088_RS05210 PF02388 FemAB family OS088_RS05215 PF02388 FemAB family OS088_RS05230 PF00005 ABC transporter OS088_RS05235 PF00005 ABC transporter OS088_RS05240 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS05245 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS05260 PF01432 Peptidase family M3 OS088_RS05260 PF08439 Oligopeptidase F OS088_RS05265 PF01895 PhoU domain OS088_RS05275 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS05280 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS05285 PF12849 PBP superfamily domain OS088_RS05290 PF13509 S1 domain OS088_RS05290 PF17783 CvfB-like winged helix domain OS088_RS05295 PF00005 ABC transporter OS088_RS05295 PF12848 ABC transporter OS088_RS05300 PF13840 ACT domain OS088_RS05300 PF01842 ACT domain OS088_RS05300 PF00696 Amino acid kinase family OS088_RS05305 PF02774 Semialdehyde dehydrogenase, dimerisation domain OS088_RS05305 PF01118 Semialdehyde dehydrogenase, NAD binding domain OS088_RS05310 PF00701 Dihydrodipicolinate synthetase family OS088_RS05315 PF01113 Dihydrodipicolinate reductase, N-terminus OS088_RS05315 PF05173 Dihydrodipicolinate reductase, C-terminus OS088_RS05320 PF14602 Hexapeptide repeat of succinyl-transferase OS088_RS05320 PF00132 Bacterial transferase hexapeptide (six repeats) OS088_RS05320 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal OS088_RS05325 PF01546 Peptidase family M20/M25/M40 OS088_RS05325 PF07687 Peptidase dimerisation domain OS088_RS05330 PF01168 Alanine racemase, N-terminal domain OS088_RS05330 PF00842 Alanine racemase, C-terminal domain OS088_RS05335 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OS088_RS05335 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain OS088_RS05345 PF00313 'Cold-shock' DNA-binding domain OS088_RS05355 PF00708 Acylphosphatase OS088_RS05365 PF05816 Toxic anion resistance protein (TelA) OS088_RS05370 PF05525 Branched-chain amino acid transport protein OS088_RS05375 PF00092 von Willebrand factor type A domain OS088_RS05380 PF07728 AAA domain (dynein-related subfamily) OS088_RS05380 PF08406 CbbQ/NirQ/NorQ C-terminal OS088_RS05395 PF02817 e3 binding domain OS088_RS05395 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OS088_RS05395 PF00364 Biotin-requiring enzyme OS088_RS05400 PF00676 Dehydrogenase E1 component OS088_RS05400 PF02779 Transketolase, pyrimidine binding domain OS088_RS05400 PF16870 2-oxoglutarate dehydrogenase C-terminal OS088_RS05405 PF18719 ArlS sensor domain OS088_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS05405 PF00512 His Kinase A (phospho-acceptor) domain OS088_RS05410 PF00072 Response regulator receiver domain OS088_RS05410 PF00486 Transcriptional regulatory protein, C terminal OS088_RS05425 PF01569 PAP2 superfamily OS088_RS05430 PF03033 Glycosyltransferase family 28 N-terminal domain OS088_RS05430 PF04101 Glycosyltransferase family 28 C-terminal domain OS088_RS05440 PF01471 Putative peptidoglycan binding domain OS088_RS05440 PF13180 PDZ domain OS088_RS05440 PF03572 Peptidase family S41 OS088_RS05445 PF06855 YozE SAM-like fold OS088_RS05450 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 OS088_RS05455 PF01641 SelR domain OS088_RS05460 PF01625 Peptide methionine sulfoxide reductase OS088_RS05465 PF02645 Uncharacterised protein, DegV family COG1307 OS088_RS05470 PF00186 Dihydrofolate reductase OS088_RS05475 PF00303 Thymidylate synthase OS088_RS05480 PF06491 Disulphide isomerase OS088_RS05485 PF13769 Virulence factor OS088_RS05485 PF08712 Scaffold protein Nfu/NifU N terminal OS088_RS05490 PF13769 Virulence factor OS088_RS05490 PF08712 Scaffold protein Nfu/NifU N terminal OS088_RS05495 PF10782 Zinc-finger OS088_RS05500 PF02592 Putative vitamin uptake transporter OS088_RS05510 PF07564 Domain of Unknown Function (DUF1542) OS088_RS05510 PF01468 GA module OS088_RS05510 PF04650 YSIRK type signal peptide OS088_RS05515 PF07690 Major Facilitator Superfamily OS088_RS05520 PF13520 Amino acid permease OS088_RS05525 PF00291 Pyridoxal-phosphate dependent enzyme OS088_RS05530 PF05222 Alanine dehydrogenase/PNT, N-terminal domain OS088_RS05530 PF01262 Alanine dehydrogenase/PNT, C-terminal domain OS088_RS05535 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OS088_RS05535 PF01367 5'-3' exonuclease, C-terminal SAM fold OS088_RS05540 PF00350 Dynamin family OS088_RS05555 PF02926 THUMP domain OS088_RS05555 PF01170 Putative RNA methylase family UPF0020 OS088_RS05565 PF05103 DivIVA protein OS088_RS05570 PF06908 YspA SLOG family OS088_RS05580 PF03838 Recombination protein U OS088_RS05585 PF00905 Penicillin binding protein transpeptidase domain OS088_RS05585 PF00912 Transglycosylase OS088_RS05595 PF10576 Iron-sulfur binding domain of endonuclease III OS088_RS05595 PF00633 Helix-hairpin-helix motif OS088_RS05595 PF00730 HhH-GPD superfamily base excision DNA repair protein OS088_RS05600 PF07261 Replication initiation and membrane attachment OS088_RS05605 PF00152 tRNA synthetases class II (D, K and N) OS088_RS05605 PF01336 OB-fold nucleic acid binding domain OS088_RS05610 PF13307 Helicase C-terminal domain OS088_RS05610 PF00929 Exonuclease OS088_RS05615 PF02237 Biotin protein ligase C terminal domain OS088_RS05615 PF08279 HTH domain OS088_RS05615 PF03099 Biotin/lipoate A/B protein ligase family OS088_RS05620 PF01743 Poly A polymerase head domain OS088_RS05620 PF12627 Probable RNA and SrmB- binding site of polymerase A OS088_RS05620 PF13735 tRNA nucleotidyltransferase domain 2 putative OS088_RS05625 PF00534 Glycosyl transferases group 1 OS088_RS05625 PF13439 Glycosyltransferase Family 4 OS088_RS05630 PF03819 MazG nucleotide pyrophosphohydrolase domain OS088_RS05635 PF04298 Putative neutral zinc metallopeptidase OS088_RS05640 PF07187 Protein of unknown function (DUF1405) OS088_RS05645 PF08858 IDEAL domain OS088_RS05645 PF08864 UPF0302 domain OS088_RS05655 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OS088_RS05660 PF01761 3-dehydroquinate synthase OS088_RS05665 PF01264 Chorismate synthase OS088_RS05675 PF00334 Nucleoside diphosphate kinase OS088_RS05680 PF00348 Polyprenyl synthetase OS088_RS05685 PF01209 ubiE/COQ5 methyltransferase family OS088_RS05695 PF00216 Bacterial DNA-binding protein OS088_RS05700 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus OS088_RS05700 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus OS088_RS05705 PF01926 50S ribosome-binding GTPase OS088_RS05705 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal OS088_RS05710 PF00575 S1 RNA binding domain OS088_RS05725 PF02224 Cytidylate kinase OS088_RS05730 PF00710 Asparaginase, N-terminal OS088_RS05730 PF17763 Glutaminase/Asparaginase C-terminal domain OS088_RS05745 PF01476 LysM domain OS088_RS05750 PF00270 DEAD/DEAH box helicase OS088_RS05750 PF00271 Helicase conserved C-terminal domain OS088_RS05765 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OS088_RS05765 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OS088_RS05775 PF00155 Aminotransferase class I and II OS088_RS05795 PF00694 Aconitase C-terminal domain OS088_RS05800 PF00330 Aconitase family (aconitate hydratase) OS088_RS05825 PF00682 HMGL-like OS088_RS05825 PF08502 LeuA allosteric (dimerisation) domain OS088_RS05830 PF00682 HMGL-like OS088_RS05830 PF08502 LeuA allosteric (dimerisation) domain OS088_RS05835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OS088_RS05835 PF03466 LysR substrate binding domain OS088_RS05840 PF01695 IstB-like ATP binding protein OS088_RS05860 PF01695 IstB-like ATP binding protein OS088_RS05880 PF12822 ECF transporter, substrate-specific component OS088_RS05900 PF18698 Histidine kinase sensor domain OS088_RS05900 PF00512 His Kinase A (phospho-acceptor) domain OS088_RS05900 PF00672 HAMP domain OS088_RS05900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS05905 PF00072 Response regulator receiver domain OS088_RS05905 PF00486 Transcriptional regulatory protein, C terminal OS088_RS05910 PF01479 S4 domain OS088_RS05910 PF00849 RNA pseudouridylate synthase OS088_RS05915 PF04079 Segregation and condensation complex subunit ScpB OS088_RS05920 PF02616 Segregation and condensation protein ScpA OS088_RS05930 PF02899 Phage integrase, N-terminal SAM-like domain OS088_RS05930 PF00589 Phage integrase family OS088_RS05935 PF01475 Ferric uptake regulator family OS088_RS05940 PF00293 NUDIX domain OS088_RS05945 PF00248 Aldo/keto reductase family OS088_RS05955 PF00106 short chain dehydrogenase OS088_RS05960 PF03807 NADP oxidoreductase coenzyme F420-dependent OS088_RS05960 PF14748 Pyrroline-5-carboxylate reductase dimerisation OS088_RS05965 PF12706 Beta-lactamase superfamily domain OS088_RS05970 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain OS088_RS05970 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain OS088_RS05980 PF16657 Maltogenic Amylase, C-terminal domain OS088_RS05980 PF00128 Alpha amylase, catalytic domain OS088_RS05985 PF00356 Bacterial regulatory proteins, lacI family OS088_RS06015 PF00005 ABC transporter OS088_RS06025 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain OS088_RS06025 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase OS088_RS06030 PF01546 Peptidase family M20/M25/M40 OS088_RS06030 PF07687 Peptidase dimerisation domain OS088_RS06040 PF06081 Aromatic acid exporter family member 1 OS088_RS06040 PF11728 Putative aromatic acid exporter C-terminal domain OS088_RS06045 PF06491 Disulphide isomerase OS088_RS06050 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) OS088_RS06050 PF00364 Biotin-requiring enzyme OS088_RS06050 PF02817 e3 binding domain OS088_RS06055 PF02779 Transketolase, pyrimidine binding domain OS088_RS06055 PF02780 Transketolase, C-terminal domain OS088_RS06060 PF00676 Dehydrogenase E1 component OS088_RS06065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain OS088_RS06065 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS06070 PF13476 AAA domain OS088_RS06075 PF01316 Arginine repressor, DNA binding domain OS088_RS06075 PF02863 Arginine repressor, C-terminal domain OS088_RS06080 PF00348 Polyprenyl synthetase OS088_RS06085 PF02609 Exonuclease VII small subunit OS088_RS06090 PF02601 Exonuclease VII, large subunit OS088_RS06090 PF13742 OB-fold nucleic acid binding domain OS088_RS06095 PF01029 NusB family OS088_RS06100 PF03780 Asp23 family, cell envelope-related function OS088_RS06105 PF02785 Biotin carboxylase C-terminal domain OS088_RS06105 PF00289 Biotin carboxylase, N-terminal domain OS088_RS06105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OS088_RS06110 PF00364 Biotin-requiring enzyme OS088_RS06115 PF01132 Elongation factor P (EF-P) OB domain OS088_RS06115 PF08207 Elongation factor P (EF-P) KOW-like domain OS088_RS06115 PF09285 Elongation factor P, C-terminal OS088_RS06120 PF01321 Creatinase/Prolidase N-terminal domain OS088_RS06120 PF00557 Metallopeptidase family M24 OS088_RS06135 PF03099 Biotin/lipoate A/B protein ligase family OS088_RS06140 PF00581 Rhodanese-like domain OS088_RS06145 PF00266 Aminotransferase class-V OS088_RS06150 PF02347 Glycine cleavage system P-protein OS088_RS06155 PF01571 Aminomethyltransferase folate-binding domain OS088_RS06155 PF08669 Glycine cleavage T-protein C-terminal barrel domain OS088_RS06160 PF01202 Shikimate kinase OS088_RS06185 PF07963 Prokaryotic N-terminal methylation motif OS088_RS06190 PF00482 Type II secretion system (T2SS), protein F OS088_RS06195 PF00437 Type II/IV secretion system protein OS088_RS06200 PF00753 Metallo-beta-lactamase superfamily OS088_RS06205 PF01910 Thiamine-binding protein OS088_RS06210 PF00480 ROK family OS088_RS06215 PF06014 Bacterial protein of unknown function (DUF910) OS088_RS06225 PF01812 5-formyltetrahydrofolate cyclo-ligase family OS088_RS06230 PF00471 Ribosomal protein L33 OS088_RS06235 PF00905 Penicillin binding protein transpeptidase domain OS088_RS06235 PF03717 Penicillin-binding Protein dimerisation domain OS088_RS06240 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OS088_RS06240 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OS088_RS06245 PF01475 Ferric uptake regulator family OS088_RS06250 PF00950 ABC 3 transport family OS088_RS06255 PF00005 ABC transporter OS088_RS06260 PF01261 Xylose isomerase-like TIM barrel OS088_RS06265 PF00270 DEAD/DEAH box helicase OS088_RS06265 PF00271 Helicase conserved C-terminal domain OS088_RS06270 PF01784 NIF3 (NGG1p interacting factor 3) OS088_RS06275 PF04816 tRNA (adenine(22)-N(1))-methyltransferase OS088_RS06280 PF03979 Sigma-70 factor, region 1.1 OS088_RS06280 PF04545 Sigma-70, region 4 OS088_RS06280 PF04539 Sigma-70 region 3 OS088_RS06280 PF00140 Sigma-70 factor, region 1.2 OS088_RS06280 PF04542 Sigma-70 region 2 OS088_RS06285 PF08275 DNA primase catalytic core, N-terminal domain OS088_RS06285 PF00772 DnaB-like helicase N terminal domain OS088_RS06285 PF01807 CHC2 zinc finger OS088_RS06290 PF03618 Kinase/pyrophosphorylase OS088_RS06295 PF00571 CBS domain OS088_RS06295 PF08279 HTH domain OS088_RS06300 PF03129 Anticodon binding domain OS088_RS06300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OS088_RS06310 PF02565 Recombination protein O C terminal OS088_RS06310 PF11967 Recombination protein O N terminal OS088_RS06315 PF07650 KH domain OS088_RS06315 PF01926 50S ribosome-binding GTPase OS088_RS06320 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region OS088_RS06330 PF02130 Uncharacterized protein family UPF0054 OS088_RS06335 PF02562 PhoH-like protein OS088_RS06345 PF12127 SigmaW regulon antibacterial OS088_RS06350 PF01972 Serine dehydrogenase proteinase OS088_RS06350 PF01957 NfeD-like C-terminal, partner-binding OS088_RS06355 PF01165 Ribosomal protein S21 OS088_RS06360 PF04055 Radical SAM superfamily OS088_RS06360 PF00919 Uncharacterized protein family UPF0004 OS088_RS06360 PF01938 TRAM domain OS088_RS06365 PF04452 RNA methyltransferase OS088_RS06375 PF00226 DnaJ domain OS088_RS06375 PF01556 DnaJ C terminal domain OS088_RS06375 PF00684 DnaJ central domain OS088_RS06380 PF00012 Hsp70 protein OS088_RS06385 PF01025 GrpE OS088_RS06390 PF01628 HrcA protein C terminal domain OS088_RS06395 PF06969 HemN C-terminal domain OS088_RS06395 PF04055 Radical SAM superfamily OS088_RS06400 PF00679 Elongation factor G C-terminus OS088_RS06400 PF00009 Elongation factor Tu GTP binding domain OS088_RS06400 PF03144 Elongation factor Tu domain 2 OS088_RS06400 PF06421 GTP-binding protein LepA C-terminus OS088_RS06405 PF01649 Ribosomal protein S20 OS088_RS06410 PF06144 DNA polymerase III, delta subunit OS088_RS06415 PF13567 Domain of unknown function (DUF4131) OS088_RS06415 PF00753 Metallo-beta-lactamase superfamily OS088_RS06415 PF03772 Competence protein OS088_RS06420 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region OS088_RS06430 PF13649 Methyltransferase domain OS088_RS06440 PF01966 HD domain OS088_RS06445 PF01467 Cytidylyltransferase-like OS088_RS06450 PF01985 CRS1 / YhbY (CRM) domain OS088_RS06455 PF18317 Shikimate 5'-dehydrogenase C-terminal domain OS088_RS06455 PF01488 Shikimate / quinate 5-dehydrogenase OS088_RS06455 PF08501 Shikimate dehydrogenase substrate binding domain OS088_RS06460 PF01926 50S ribosome-binding GTPase OS088_RS06470 PF01048 Phosphorylase superfamily OS088_RS06480 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS06485 PF12728 Helix-turn-helix domain OS088_RS06485 PF02661 Fic/DOC family OS088_RS06490 PF01566 Natural resistance-associated macrophage protein OS088_RS06495 PF03746 LamB/YcsF family OS088_RS06500 PF02785 Biotin carboxylase C-terminal domain OS088_RS06500 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain OS088_RS06500 PF00289 Biotin carboxylase, N-terminal domain OS088_RS06505 PF00364 Biotin-requiring enzyme OS088_RS06510 PF02626 Carboxyltransferase domain, subdomain A and B OS088_RS06515 PF02682 Carboxyltransferase domain, subdomain C and D OS088_RS06520 PF01272 Transcription elongation factor, GreA/GreB, C-term OS088_RS06520 PF03449 Transcription elongation factor, N-terminal OS088_RS06525 PF00485 Phosphoribulokinase / Uridine kinase family OS088_RS06530 PF01136 Peptidase family U32 OS088_RS06530 PF16325 Peptidase family U32 C-terminal domain OS088_RS06535 PF01136 Peptidase family U32 OS088_RS06545 PF06949 Protein of unknown function (DUF1292) OS088_RS06550 PF03652 Holliday junction resolvase OS088_RS06555 PF06135 IreB regulatory phosphoprotein OS088_RS06560 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OS088_RS06560 PF01411 tRNA synthetases class II (A) OS088_RS06560 PF02272 DHHA1 domain OS088_RS06565 PF13538 UvrD-like helicase C-terminal domain OS088_RS06565 PF14490 Helix-hairpin-helix containing domain OS088_RS06565 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain OS088_RS06580 PF00266 Aminotransferase class-V OS088_RS06585 PF00296 Luciferase-like monooxygenase OS088_RS06595 PF05532 CsbD-like OS088_RS06600 PF02082 Transcriptional regulator OS088_RS06605 PF16193 AAA C-terminal domain OS088_RS06605 PF12002 MgsA AAA+ ATPase C terminal OS088_RS06605 PF05496 Holliday junction DNA helicase RuvB P-loop domain OS088_RS06610 PF00899 ThiF family OS088_RS06625 PF02938 GAD domain OS088_RS06625 PF00152 tRNA synthetases class II (D, K and N) OS088_RS06625 PF01336 OB-fold nucleic acid binding domain OS088_RS06630 PF03129 Anticodon binding domain OS088_RS06630 PF13393 Histidyl-tRNA synthetase OS088_RS06635 PF01520 N-acetylmuramoyl-L-alanine amidase OS088_RS06635 PF08239 Bacterial SH3 domain OS088_RS06640 PF02580 D-Tyr-tRNA(Tyr) deacylase OS088_RS06645 PF13291 ACT domain OS088_RS06645 PF04607 Region found in RelA / SpoT proteins OS088_RS06645 PF02824 TGS domain OS088_RS06650 PF00156 Phosphoribosyl transferase domain OS088_RS06655 PF10141 Single-strand DNA-specific exonuclease, C terminal domain OS088_RS06655 PF01368 DHH family OS088_RS06655 PF02272 DHHA1 domain OS088_RS06655 PF17768 RecJ OB domain OS088_RS06660 PF07549 SecD/SecF GG Motif OS088_RS06660 PF02355 Protein export membrane protein OS088_RS06665 PF02699 Preprotein translocase subunit OS088_RS06670 PF01702 Queuine tRNA-ribosyltransferase OS088_RS06675 PF02547 Queuosine biosynthesis protein OS088_RS06680 PF17864 RuvB AAA lid domain OS088_RS06680 PF05491 RuvB C-terminal winged helix domain OS088_RS06680 PF05496 Holliday junction DNA helicase RuvB P-loop domain OS088_RS06685 PF07499 RuvA, C-terminal domain OS088_RS06685 PF01330 RuvA N terminal domain OS088_RS06695 PF01018 GTP1/OBG OS088_RS06695 PF01926 50S ribosome-binding GTPase OS088_RS06695 PF09269 Domain of unknown function (DUF1967) OS088_RS06700 PF01016 Ribosomal L27 protein OS088_RS06705 PF04327 Cysteine protease Prp OS088_RS06710 PF00829 Ribosomal prokaryotic L21 protein OS088_RS06755 PF00398 Ribosomal RNA adenine dimethylase OS088_RS06760 PF01909 Nucleotidyltransferase domain OS088_RS06760 PF13427 Domain of unknown function (DUF4111) OS088_RS06775 PF00589 Phage integrase family OS088_RS06780 PF00589 Phage integrase family OS088_RS06780 PF02899 Phage integrase, N-terminal SAM-like domain OS088_RS06790 PF06750 Bacterial Peptidase A24 N-terminal domain OS088_RS06790 PF01478 Type IV leader peptidase family OS088_RS06795 PF02875 Mur ligase family, glutamate ligase domain OS088_RS06795 PF08245 Mur ligase middle domain OS088_RS06800 PF08264 Anticodon-binding domain of tRNA OS088_RS06800 PF00133 tRNA synthetases class I (I, L, M and V) OS088_RS06800 PF10458 Valyl tRNA synthetase tRNA binding arm OS088_RS06805 PF03352 Methyladenine glycosylase OS088_RS06820 PF00202 Aminotransferase class-III OS088_RS06825 PF00490 Delta-aminolevulinic acid dehydratase OS088_RS06835 PF03900 Porphobilinogen deaminase, C-terminal domain OS088_RS06835 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain OS088_RS06840 PF01578 Cytochrome C assembly protein OS088_RS06845 PF01488 Shikimate / quinate 5-dehydrogenase OS088_RS06845 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain OS088_RS06845 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain OS088_RS06850 PF01926 50S ribosome-binding GTPase OS088_RS06855 PF10431 C-terminal, D2-small domain, of ClpB protein OS088_RS06855 PF07724 AAA domain (Cdc48 subfamily) OS088_RS06855 PF06689 ClpX C4-type zinc finger OS088_RS06860 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase OS088_RS06860 PF05697 Bacterial trigger factor protein (TF) OS088_RS06860 PF05698 Bacterial trigger factor protein (TF) C-terminus OS088_RS06880 PF00453 Ribosomal protein L20 OS088_RS06885 PF01632 Ribosomal protein L35 OS088_RS06890 PF05198 Translation initiation factor IF-3, N-terminal domain OS088_RS06890 PF00707 Translation initiation factor IF-3, C-terminal domain OS088_RS06895 PF00324 Amino acid permease OS088_RS06900 PF02824 TGS domain OS088_RS06900 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain OS088_RS06900 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OS088_RS06900 PF03129 Anticodon binding domain OS088_RS06910 PF01695 IstB-like ATP binding protein OS088_RS06910 PF07319 Primosomal protein DnaI N-terminus OS088_RS06920 PF03477 ATP cone domain OS088_RS06925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain OS088_RS06925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain OS088_RS06930 PF01121 Dephospho-CoA kinase OS088_RS06935 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain OS088_RS06935 PF06827 Zinc finger found in FPG and IleRS OS088_RS06935 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain OS088_RS06940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain OS088_RS06940 PF01367 5'-3' exonuclease, C-terminal SAM fold OS088_RS06940 PF00476 DNA polymerase family A OS088_RS06950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS06950 PF00512 His Kinase A (phospho-acceptor) domain OS088_RS06950 PF00989 PAS fold OS088_RS06950 PF16736 Single Cache-like OS088_RS06955 PF00072 Response regulator receiver domain OS088_RS06955 PF00486 Transcriptional regulatory protein, C terminal OS088_RS06960 PF00180 Isocitrate/isopropylmalate dehydrogenase OS088_RS06965 PF00285 Citrate synthase, C-terminal domain OS088_RS06970 PF00324 Amino acid permease OS088_RS06975 PF00391 PEP-utilising enzyme, mobile domain OS088_RS06975 PF00224 Pyruvate kinase, barrel domain OS088_RS06975 PF02887 Pyruvate kinase, alpha/beta domain OS088_RS06980 PF00365 Phosphofructokinase OS088_RS06985 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit OS088_RS06990 PF17848 Acetyl-coA carboxylase zinc finger domain OS088_RS06990 PF01039 Carboxyl transferase domain OS088_RS06995 PF00390 Malic enzyme, N-terminal domain OS088_RS06995 PF03949 Malic enzyme, NAD binding domain OS088_RS07000 PF14579 Helix-hairpin-helix motif OS088_RS07000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain OS088_RS07000 PF07733 Bacterial DNA polymerase III alpha NTPase domain OS088_RS07000 PF01336 OB-fold nucleic acid binding domain OS088_RS07000 PF02811 PHP domain OS088_RS07005 PF02272 DHHA1 domain OS088_RS07005 PF01368 DHH family OS088_RS07010 PF03061 Thioesterase superfamily OS088_RS07010 PF00392 Bacterial regulatory proteins, gntR family OS088_RS07010 PF07085 DRTGG domain OS088_RS07010 PF00571 CBS domain OS088_RS07025 PF01321 Creatinase/Prolidase N-terminal domain OS088_RS07025 PF00557 Metallopeptidase family M24 OS088_RS07035 PF05222 Alanine dehydrogenase/PNT, N-terminal domain OS088_RS07035 PF01262 Alanine dehydrogenase/PNT, C-terminal domain OS088_RS07040 PF00582 Universal stress protein family OS088_RS07045 PF00871 Acetokinase family OS088_RS07050 PF02384 N-6 DNA Methylase OS088_RS07055 PF08534 Redoxin OS088_RS07060 PF01925 Sulfite exporter TauE/SafE OS088_RS07065 PF02568 Thiamine biosynthesis protein (ThiI) OS088_RS07065 PF02926 THUMP domain OS088_RS07070 PF00266 Aminotransferase class-V OS088_RS07080 PF06160 Septation ring formation regulator, EzrA OS088_RS07085 PF13185 GAF domain OS088_RS07090 PF00163 Ribosomal protein S4/S9 N-terminal domain OS088_RS07090 PF01479 S4 domain OS088_RS07095 PF03009 Glycerophosphoryl diester phosphodiesterase family OS088_RS07100 PF02566 OsmC-like protein OS088_RS07105 PF00266 Aminotransferase class-V OS088_RS07110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OS088_RS07110 PF01842 ACT domain OS088_RS07110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OS088_RS07130 PF02378 Phosphotransferase system, EIIC OS088_RS07130 PF00367 phosphotransferase system, EIIB OS088_RS07135 PF01553 Acyltransferase OS088_RS07140 PF13180 PDZ domain OS088_RS07145 PF00579 tRNA synthetases class I (W and Y) OS088_RS07145 PF01479 S4 domain OS088_RS07150 PF00912 Transglycosylase OS088_RS07150 PF00905 Penicillin binding protein transpeptidase domain OS088_RS07160 PF05031 Iron Transport-associated domain OS088_RS07160 PF04650 YSIRK type signal peptide OS088_RS07170 PF01268 Formate--tetrahydrofolate ligase OS088_RS07175 PF00501 AMP-binding enzyme OS088_RS07175 PF13193 AMP-binding enzyme C-terminal domain OS088_RS07180 PF00583 Acetyltransferase (GNAT) family OS088_RS07185 PF00850 Histone deacetylase domain OS088_RS07190 PF00356 Bacterial regulatory proteins, lacI family OS088_RS07205 PF01817 Chorismate mutase type II OS088_RS07205 PF00793 DAHP synthetase I family OS088_RS07220 PF06103 Bacterial protein of unknown function (DUF948) OS088_RS07225 PF01225 Mur ligase family, catalytic domain OS088_RS07225 PF02875 Mur ligase family, glutamate ligase domain OS088_RS07225 PF08245 Mur ligase middle domain OS088_RS07230 PF09397 Ftsk gamma domain OS088_RS07230 PF17854 FtsK alpha domain OS088_RS07230 PF01580 FtsK/SpoIIIE family OS088_RS07235 PF14794 Domain of unknown function (DUF4479) OS088_RS07235 PF01588 Putative tRNA binding domain OS088_RS07240 PF07285 Protein of unknown function (DUF1444) OS088_RS07245 PF00085 Thioredoxin OS088_RS07250 PF05343 M42 glutamyl aminopeptidase OS088_RS07260 PF00753 Metallo-beta-lactamase superfamily OS088_RS07270 PF02390 Putative methyltransferase OS088_RS07275 PF01636 Phosphotransferase enzyme family OS088_RS07280 PF01063 Amino-transferase class IV OS088_RS07285 PF01546 Peptidase family M20/M25/M40 OS088_RS07295 PF00849 RNA pseudouridylate synthase OS088_RS07295 PF01479 S4 domain OS088_RS07300 PF01943 Polysaccharide biosynthesis protein OS088_RS07300 PF14667 Polysaccharide biosynthesis C-terminal domain OS088_RS07310 PF07564 Domain of Unknown Function (DUF1542) OS088_RS07310 PF01468 GA module OS088_RS07320 PF08264 Anticodon-binding domain of tRNA OS088_RS07320 PF00133 tRNA synthetases class I (I, L, M and V) OS088_RS07320 PF13603 Leucyl-tRNA synthetase, Domain 2 OS088_RS07320 PF09334 tRNA synthetases class I (M) OS088_RS07325 PF07690 Major Facilitator Superfamily OS088_RS07330 PF16199 Radical_SAM C-terminal domain OS088_RS07330 PF04055 Radical SAM superfamily OS088_RS07335 PF06962 Putative rRNA methylase OS088_RS07340 PF01047 MarR family OS088_RS07345 PF12146 Serine aminopeptidase, S33 OS088_RS07355 PF01619 Proline dehydrogenase OS088_RS07360 PF00885 6,7-dimethyl-8-ribityllumazine synthase OS088_RS07365 PF00925 GTP cyclohydrolase II OS088_RS07365 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase OS088_RS07370 PF00677 Lumazine binding domain OS088_RS07375 PF01872 RibD C-terminal domain OS088_RS07375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region OS088_RS07385 PF01022 Bacterial regulatory protein, arsR family OS088_RS07390 PF02040 Arsenical pump membrane protein OS088_RS07395 PF01451 Low molecular weight phosphotyrosine protein phosphatase OS088_RS07400 PF07690 Major Facilitator Superfamily OS088_RS07410 PF13457 GW (Gly-Tryp) dipeptide domain OS088_RS07410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase OS088_RS07420 PF00196 Bacterial regulatory proteins, luxR family OS088_RS07420 PF04542 Sigma-70 region 2 OS088_RS07445 PF00923 Transaldolase/Fructose-6-phosphate aldolase OS088_RS07455 PF02537 CrcB-like protein, Camphor Resistance (CrcB) OS088_RS07460 PF02537 CrcB-like protein, Camphor Resistance (CrcB) OS088_RS07470 PF00248 Aldo/keto reductase family OS088_RS07480 PF00438 S-adenosylmethionine synthetase, N-terminal domain OS088_RS07480 PF02772 S-adenosylmethionine synthetase, central domain OS088_RS07480 PF02773 S-adenosylmethionine synthetase, C-terminal domain OS088_RS07485 PF01293 Phosphoenolpyruvate carboxykinase OS088_RS07490 PF00326 Prolyl oligopeptidase family OS088_RS07495 PF00293 NUDIX domain OS088_RS07495 PF09297 NADH pyrophosphatase zinc ribbon domain OS088_RS07500 PF01809 Putative membrane protein insertion efficiency factor OS088_RS07510 PF00501 AMP-binding enzyme OS088_RS07510 PF13193 AMP-binding enzyme C-terminal domain OS088_RS07555 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS07560 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS07610 PF01593 Flavin containing amine oxidoreductase OS088_RS07615 PF00762 Ferrochelatase OS088_RS07620 PF01208 Uroporphyrinogen decarboxylase (URO-D) OS088_RS07640 PF00005 ABC transporter OS088_RS07645 PF01230 HIT domain OS088_RS07660 PF00639 PPIC-type PPIASE domain OS088_RS07665 PF01966 HD domain OS088_RS07675 PF00149 Calcineurin-like phosphoesterase OS088_RS07685 PF06133 Control of competence regulator ComK, YlbF/YmcA OS088_RS07690 PF04286 Protein of unknown function (DUF445) OS088_RS07700 PF00072 Response regulator receiver domain OS088_RS07700 PF00196 Bacterial regulatory proteins, luxR family OS088_RS07705 PF13185 GAF domain OS088_RS07705 PF07730 Histidine kinase OS088_RS07710 PF00849 RNA pseudouridylate synthase OS088_RS07710 PF01479 S4 domain OS088_RS07715 PF10415 Fumarase C C-terminus OS088_RS07715 PF00206 Lyase OS088_RS07725 PF01695 IstB-like ATP binding protein OS088_RS07730 PF00665 Integrase core domain OS088_RS07745 PF00588 SpoU rRNA Methylase family OS088_RS07750 PF08331 Domain of unknown function (DUF1730) OS088_RS07755 PF00005 ABC transporter OS088_RS07760 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS07925 PF01475 Ferric uptake regulator family OS088_RS07930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OS088_RS07930 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OS088_RS07935 PF00578 AhpC/TSA family OS088_RS07940 PF00202 Aminotransferase class-III OS088_RS07945 PF06081 Aromatic acid exporter family member 1 OS088_RS07950 PF00664 ABC transporter transmembrane region OS088_RS07950 PF00005 ABC transporter OS088_RS07955 PF04167 Protein of unknown function (DUF402) OS088_RS07960 PF00730 HhH-GPD superfamily base excision DNA repair protein OS088_RS07960 PF14815 NUDIX domain OS088_RS07965 PF04307 LexA-binding, inner membrane-associated putative hydrolase OS088_RS07975 PF01476 LysM domain OS088_RS07975 PF00005 ABC transporter OS088_RS07985 PF02631 RecX family OS088_RS07990 PF00912 Transglycosylase OS088_RS07995 PF01965 DJ-1/PfpI family OS088_RS08005 PF04055 Radical SAM superfamily OS088_RS08005 PF08756 YfkB-like domain OS088_RS08010 PF03061 Thioesterase superfamily OS088_RS08015 PF02073 Thermophilic metalloprotease (M29) OS088_RS08020 PF06569 Protein of unknown function (DUF1128) OS088_RS08025 PF01451 Low molecular weight phosphotyrosine protein phosphatase OS088_RS08035 PF03631 Virulence factor BrkB OS088_RS08040 PF00196 Bacterial regulatory proteins, luxR family OS088_RS08040 PF00072 Response regulator receiver domain OS088_RS08045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS08045 PF07730 Histidine kinase OS088_RS08060 PF00557 Metallopeptidase family M24 OS088_RS08065 PF06081 Aromatic acid exporter family member 1 OS088_RS08080 PF07685 CobB/CobQ-like glutamine amidotransferase domain OS088_RS08085 PF08353 Domain of unknown function (DUF1727) OS088_RS08085 PF08245 Mur ligase middle domain OS088_RS08090 PF00210 Ferritin-like domain OS088_RS08095 PF00135 Carboxylesterase family OS088_RS08105 PF00817 impB/mucB/samB family OS088_RS08105 PF11799 impB/mucB/samB family C-terminal domain OS088_RS08115 PF05958 tRNA (Uracil-5-)-methyltransferase OS088_RS08120 PF00781 Diacylglycerol kinase catalytic domain OS088_RS08130 PF02934 GatB/GatE catalytic domain OS088_RS08130 PF02637 GatB domain OS088_RS08135 PF01425 Amidase OS088_RS08140 PF02686 Glu-tRNAGln amidotransferase C subunit OS088_RS08145 PF00474 Sodium:solute symporter family OS088_RS08150 PF01638 HxlR-like helix-turn-helix OS088_RS08155 PF03060 Nitronate monooxygenase OS088_RS08160 PF07537 CamS sex pheromone cAM373 precursor OS088_RS08165 PF12826 Helix-hairpin-helix motif OS088_RS08165 PF03119 NAD-dependent DNA ligase C4 zinc finger domain OS088_RS08165 PF03120 NAD-dependent DNA ligase OB-fold domain OS088_RS08165 PF00533 BRCA1 C Terminus (BRCT) domain OS088_RS08165 PF01653 NAD-dependent DNA ligase adenylation domain OS088_RS08170 PF00580 UvrD/REP helicase N-terminal domain OS088_RS08170 PF13361 UvrD-like helicase C-terminal domain OS088_RS08175 PF01884 PcrB family OS088_RS08180 PF01371 Trp repressor protein OS088_RS08185 PF00206 Lyase OS088_RS08185 PF10397 Adenylosuccinate lyase C-terminus OS088_RS08190 PF05543 Staphopain peptidase C47 OS088_RS08190 PF14731 Staphopain proregion OS088_RS08200 PF14044 NETI protein OS088_RS08205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) OS088_RS08210 PF02540 NAD synthase OS088_RS08215 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family OS088_RS08215 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain OS088_RS08215 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain OS088_RS08220 PF02898 Nitric oxide synthase, oxygenase domain OS088_RS08225 PF01842 ACT domain OS088_RS08225 PF00800 Prephenate dehydratase OS088_RS08235 PF00939 Sodium:sulfate symporter transmembrane region OS088_RS08245 PF00857 Isochorismatase family OS088_RS08250 PF01368 DHH family OS088_RS08250 PF02833 DHHA2 domain OS088_RS08260 PF00171 Aldehyde dehydrogenase family OS088_RS08265 PF10282 Lactonase, 7-bladed beta-propeller OS088_RS08275 PF03965 Penicillinase repressor OS088_RS08280 PF05569 BlaR1 peptidase M56 OS088_RS08280 PF00905 Penicillin binding protein transpeptidase domain OS088_RS08285 PF08139 Prokaryotic membrane lipoprotein lipid attachment site OS088_RS08295 PF08863 YolD-like protein OS088_RS08315 PF01695 IstB-like ATP binding protein OS088_RS08330 PF02899 Phage integrase, N-terminal SAM-like domain OS088_RS08330 PF00589 Phage integrase family OS088_RS08375 PF00005 ABC transporter OS088_RS08385 PF00005 ABC transporter OS088_RS08390 PF00392 Bacterial regulatory proteins, gntR family OS088_RS08410 PF03642 MAP domain OS088_RS08415 PF03372 Endonuclease/Exonuclease/phosphatase family OS088_RS08430 PF11546 Staphylococcal complement inhibitor SCIN OS088_RS08440 PF02821 Staphylokinase/Streptokinase family OS088_RS08445 PF01510 N-acetylmuramoyl-L-alanine amidase OS088_RS08445 PF05257 CHAP domain OS088_RS08445 PF08460 Bacterial SH3 domain OS088_RS08495 PF01551 Peptidase family M23 OS088_RS08495 PF04225 Opacity-associated protein A LysM-like domain OS088_RS08550 PF04860 Phage portal protein OS088_RS08660 PF00436 Single-strand binding protein family OS088_RS08765 PF07968 Leukocidin/Hemolysin toxin family OS088_RS08770 PF07968 Leukocidin/Hemolysin toxin family OS088_RS08775 PF01546 Peptidase family M20/M25/M40 OS088_RS08775 PF07687 Peptidase dimerisation domain OS088_RS08780 PF02386 Cation transport protein OS088_RS08785 PF00118 TCP-1/cpn60 chaperonin family OS088_RS08790 PF00166 Chaperonin 10 Kd subunit OS088_RS08795 PF02517 CPBP intramembrane metalloprotease OS088_RS08815 PF05372 Delta lysin family OS088_RS08820 PF04647 Accessory gene regulator B OS088_RS08835 PF00072 Response regulator receiver domain OS088_RS08835 PF04397 LytTr DNA-binding domain OS088_RS08845 PF00294 pfkB family carbohydrate kinase OS088_RS08850 PF00251 Glycosyl hydrolases family 32 N-terminal domain OS088_RS08850 PF08244 Glycosyl hydrolases family 32 C terminal OS088_RS08855 PF00356 Bacterial regulatory proteins, lacI family OS088_RS08855 PF13407 Periplasmic binding protein domain OS088_RS08860 PF00909 Ammonium Transporter Family OS088_RS08865 PF01206 Sulfurtransferase TusA OS088_RS08875 PF06971 Putative DNA-binding protein N-terminus OS088_RS08875 PF02629 CoA binding domain OS088_RS08880 PF00005 ABC transporter OS088_RS08880 PF16326 ABC transporter C-terminal domain OS088_RS08880 PF12848 ABC transporter OS088_RS08895 PF01624 MutS domain I OS088_RS08895 PF05192 MutS domain III OS088_RS08895 PF05190 MutS family domain IV OS088_RS08895 PF00488 MutS domain V OS088_RS08895 PF05188 MutS domain II OS088_RS08900 PF00814 Glycoprotease family OS088_RS08905 PF00583 Acetyltransferase (GNAT) family OS088_RS08910 PF00814 Glycoprotease family OS088_RS08915 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE OS088_RS08925 PF00920 Dehydratase family OS088_RS08930 PF00205 Thiamine pyrophosphate enzyme, central domain OS088_RS08930 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OS088_RS08930 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OS088_RS08940 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain OS088_RS08940 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain OS088_RS08950 PF00180 Isocitrate/isopropylmalate dehydrogenase OS088_RS08955 PF00330 Aconitase family (aconitate hydratase) OS088_RS08960 PF00694 Aconitase C-terminal domain OS088_RS08965 PF00291 Pyridoxal-phosphate dependent enzyme OS088_RS08965 PF00585 C-terminal regulatory domain of Threonine dehydratase OS088_RS08970 PF01695 IstB-like ATP binding protein OS088_RS08975 PF00665 Integrase core domain OS088_RS09005 PF17283 SprT-like zinc ribbon domain OS088_RS09005 PF10263 SprT-like family OS088_RS09010 PF17674 HHH domain OS088_RS09010 PF00575 S1 RNA binding domain OS088_RS09010 PF09371 Tex-like protein N-terminal domain OS088_RS09010 PF16921 Tex protein YqgF-like domain OS088_RS09015 PF04539 Sigma-70 region 3 OS088_RS09015 PF04545 Sigma-70, region 4 OS088_RS09015 PF04542 Sigma-70 region 2 OS088_RS09020 PF13581 Histidine kinase-like ATPase domain OS088_RS09025 PF01740 STAS domain OS088_RS09030 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain OS088_RS09030 PF07228 Stage II sporulation protein E (SpoIIE) OS088_RS09035 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system OS088_RS09045 PF00842 Alanine racemase, C-terminal domain OS088_RS09045 PF01168 Alanine racemase, N-terminal domain OS088_RS09050 PF01648 4'-phosphopantetheinyl transferase superfamily OS088_RS09060 PF03703 Bacterial PH domain OS088_RS09070 PF02669 K+-transporting ATPase, c chain OS088_RS09080 PF03814 Potassium-transporting ATPase A subunit OS088_RS09090 PF13493 Domain of unknown function (DUF4118) OS088_RS09090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS09090 PF00512 His Kinase A (phospho-acceptor) domain OS088_RS09090 PF02702 Osmosensitive K+ channel His kinase sensor domain OS088_RS09095 PF00072 Response regulator receiver domain OS088_RS09095 PF00486 Transcriptional regulatory protein, C terminal OS088_RS09100 PF00270 DEAD/DEAH box helicase OS088_RS09100 PF00271 Helicase conserved C-terminal domain OS088_RS09105 PF08245 Mur ligase middle domain OS088_RS09105 PF02875 Mur ligase family, glutamate ligase domain OS088_RS09105 PF01225 Mur ligase family, catalytic domain OS088_RS09110 PF07478 D-ala D-ala ligase C-terminus OS088_RS09110 PF01820 D-ala D-ala ligase N-terminus OS088_RS09115 PF01098 Cell cycle protein OS088_RS09130 PF02583 Metal-sensitive transcriptional repressor OS088_RS09135 PF13091 PLD-like domain OS088_RS09135 PF13396 Phospholipase_D-nuclease N-terminal OS088_RS09140 PF01966 HD domain OS088_RS09150 PF02096 60Kd inner membrane protein OS088_RS09155 PF02581 Thiamine monophosphate synthase OS088_RS09160 PF02110 Hydroxyethylthiazole kinase family OS088_RS09165 PF08543 Phosphomethylpyrimidine kinase OS088_RS09170 PF03070 TENA/THI-4/PQQC family OS088_RS09175 PF06737 Transglycosylase-like domain OS088_RS09180 PF00436 Single-strand binding protein family OS088_RS09190 PF07977 FabA-like domain OS088_RS09195 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OS088_RS09210 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain OS088_RS09210 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain OS088_RS09215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OS088_RS09215 PF02874 ATP synthase alpha/beta family, beta-barrel domain OS088_RS09220 PF00231 ATP synthase OS088_RS09225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OS088_RS09225 PF00306 ATP synthase alpha/beta chain, C terminal domain OS088_RS09225 PF02874 ATP synthase alpha/beta family, beta-barrel domain OS088_RS09230 PF00213 ATP synthase delta (OSCP) subunit OS088_RS09235 PF00430 ATP synthase B/B' CF(0) OS088_RS09240 PF00137 ATP synthase subunit C OS088_RS09245 PF00119 ATP synthase A chain OS088_RS09255 PF02350 UDP-N-acetylglucosamine 2-epimerase OS088_RS09265 PF00464 Serine hydroxymethyltransferase OS088_RS09270 PF04260 Protein of unknown function (DUF436) OS088_RS09275 PF01451 Low molecular weight phosphotyrosine protein phosphatase OS088_RS09280 PF01300 Telomere recombination OS088_RS09280 PF03481 Putative GTP-binding controlling metal-binding OS088_RS09285 PF17827 PrmC N-terminal domain OS088_RS09285 PF05175 Methyltransferase small domain OS088_RS09290 PF00472 RF-1 domain OS088_RS09290 PF03462 PCRF domain OS088_RS09295 PF00265 Thymidine kinase OS088_RS09300 PF01197 Ribosomal protein L31 OS088_RS09305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain OS088_RS09305 PF07498 Rho termination factor, N-terminal domain OS088_RS09305 PF07497 Rho termination factor, RNA-binding domain OS088_RS09310 PF00171 Aldehyde dehydrogenase family OS088_RS09320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) OS088_RS09325 PF01116 Fructose-bisphosphate aldolase class-II OS088_RS09335 PF06418 CTP synthase N-terminus OS088_RS09335 PF00117 Glutamine amidotransferase class-I OS088_RS09340 PF05066 HB1, ASXL, restriction endonuclease HTH domain OS088_RS09350 PF03630 Fumble OS088_RS09370 PF02664 S-Ribosylhomocysteinase (LuxS) OS088_RS09380 PF02885 Glycosyl transferase family, helical bundle domain OS088_RS09380 PF00591 Glycosyl transferase family, a/b domain OS088_RS09380 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain OS088_RS09385 PF01791 DeoC/LacD family aldolase OS088_RS09390 PF01048 Phosphorylase superfamily OS088_RS09395 PF00210 Ferritin-like domain OS088_RS09415 PF01238 Phosphomannose isomerase type I OS088_RS09420 PF13460 NAD(P)H-binding OS088_RS09425 PF01022 Bacterial regulatory protein, arsR family OS088_RS09430 PF01545 Cation efflux family OS088_RS09430 PF16916 Dimerisation domain of Zinc Transporter OS088_RS09470 PF00005 ABC transporter OS088_RS09475 PF01380 SIS domain OS088_RS09480 PF02378 Phosphotransferase system, EIIC OS088_RS09480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OS088_RS09485 PF00874 PRD domain OS088_RS09485 PF08279 HTH domain OS088_RS09485 PF05043 Mga helix-turn-helix domain OS088_RS09485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OS088_RS09485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OS088_RS09490 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OS088_RS09495 PF01232 Mannitol dehydrogenase Rossmann domain OS088_RS09495 PF08125 Mannitol dehydrogenase C-terminal domain OS088_RS09500 PF07564 Domain of Unknown Function (DUF1542) OS088_RS09500 PF01468 GA module OS088_RS09500 PF04650 YSIRK type signal peptide OS088_RS09505 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OS088_RS09505 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OS088_RS09505 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OS088_RS09505 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OS088_RS09515 PF02457 DisA bacterial checkpoint controller nucleotide-binding OS088_RS09520 PF00491 Arginase family OS088_RS09575 PF10609 NUBPL iron-transfer P-loop NTPase OS088_RS09580 PF07690 Major Facilitator Superfamily OS088_RS09585 PF17080 Multidrug Resistance efflux pump OS088_RS09590 PF07690 Major Facilitator Superfamily OS088_RS09595 PF03006 Haemolysin-III related OS088_RS09600 PF01704 UTP--glucose-1-phosphate uridylyltransferase OS088_RS09605 PF04307 LexA-binding, inner membrane-associated putative hydrolase OS088_RS09615 PF07670 Nucleoside recognition OS088_RS09620 PF01032 FecCD transport family OS088_RS09625 PF01032 FecCD transport family OS088_RS09630 PF01497 Periplasmic binding protein OS088_RS09640 PF01168 Alanine racemase, N-terminal domain OS088_RS09645 PF06276 Ferric iron reductase FhuF-like transporter OS088_RS09645 PF04183 IucA / IucC family OS088_RS09650 PF05977 Transmembrane secretion effector OS088_RS09660 PF03780 Asp23 family, cell envelope-related function OS088_RS09675 PF02028 BCCT, betaine/carnitine/choline family transporter OS088_RS09680 PF00107 Zinc-binding dehydrogenase OS088_RS09680 PF08240 Alcohol dehydrogenase GroES-like domain OS088_RS09685 PF16884 N-terminal domain of oxidoreductase OS088_RS09685 PF00107 Zinc-binding dehydrogenase OS088_RS09695 PF00232 Glycosyl hydrolase family 1 OS088_RS09700 PF02378 Phosphotransferase system, EIIC OS088_RS09700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OS088_RS09705 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit OS088_RS09710 PF01791 DeoC/LacD family aldolase OS088_RS09715 PF00294 pfkB family carbohydrate kinase OS088_RS09720 PF02502 Ribose/Galactose Isomerase OS088_RS09725 PF02502 Ribose/Galactose Isomerase OS088_RS09730 PF00455 DeoR C terminal sensor domain OS088_RS09730 PF08220 DeoR-like helix-turn-helix domain OS088_RS09735 PF02146 Sir2 family OS088_RS09750 PF13936 Helix-turn-helix domain OS088_RS09750 PF00665 Integrase core domain OS088_RS09765 PF00248 Aldo/keto reductase family OS088_RS09770 PF13411 MerR HTH family regulatory protein OS088_RS09780 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain OS088_RS09780 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain OS088_RS09780 PF02278 Polysaccharide lyase family 8, super-sandwich domain OS088_RS09795 PF13439 Glycosyltransferase Family 4 OS088_RS09795 PF00534 Glycosyl transferases group 1 OS088_RS09800 PF05116 Sucrose-6F-phosphate phosphohydrolase OS088_RS09810 PF03306 Alpha-acetolactate decarboxylase OS088_RS09815 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OS088_RS09815 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OS088_RS09815 PF00205 Thiamine pyrophosphate enzyme, central domain OS088_RS09830 PF02567 Phenazine biosynthesis-like protein OS088_RS09835 PF00380 Ribosomal protein S9/S16 OS088_RS09840 PF00572 Ribosomal protein L13 OS088_RS09845 PF01416 tRNA pseudouridine synthase OS088_RS09850 PF02361 Cobalt transport protein OS088_RS09855 PF00005 ABC transporter OS088_RS09860 PF00005 ABC transporter OS088_RS09865 PF01196 Ribosomal protein L17 OS088_RS09870 PF01000 RNA polymerase Rpb3/RpoA insert domain OS088_RS09870 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain OS088_RS09870 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain OS088_RS09875 PF00411 Ribosomal protein S11 OS088_RS09880 PF00416 Ribosomal protein S13/S18 OS088_RS09885 PF00444 Ribosomal protein L36 OS088_RS09890 PF01176 Translation initiation factor 1A / IF-1 OS088_RS09895 PF05191 Adenylate kinase, active site lid OS088_RS09900 PF00344 SecY translocase OS088_RS09905 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A OS088_RS09910 PF00327 Ribosomal protein L30p/L7e OS088_RS09915 PF03719 Ribosomal protein S5, C-terminal domain OS088_RS09915 PF00333 Ribosomal protein S5, N-terminal domain OS088_RS09920 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast OS088_RS09925 PF00347 Ribosomal protein L6 OS088_RS09930 PF00410 Ribosomal protein S8 OS088_RS09935 PF00253 Ribosomal protein S14p/S29e OS088_RS09940 PF00281 Ribosomal protein L5 OS088_RS09940 PF00673 ribosomal L5P family C-terminus OS088_RS09945 PF00467 KOW motif OS088_RS09945 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 OS088_RS09950 PF00238 Ribosomal protein L14p/L23e OS088_RS09955 PF00366 Ribosomal protein S17 OS088_RS09960 PF00831 Ribosomal L29 protein OS088_RS09965 PF00252 Ribosomal protein L16p/L10e OS088_RS09970 PF00189 Ribosomal protein S3, C-terminal domain OS088_RS09970 PF07650 KH domain OS088_RS09975 PF00237 Ribosomal protein L22p/L17e OS088_RS09980 PF00203 Ribosomal protein S19 OS088_RS09985 PF00181 Ribosomal Proteins L2, RNA binding domain OS088_RS09985 PF03947 Ribosomal Proteins L2, C-terminal domain OS088_RS09990 PF00276 Ribosomal protein L23 OS088_RS09995 PF00573 Ribosomal protein L4/L1 family OS088_RS10000 PF00297 Ribosomal protein L3 OS088_RS10005 PF00338 Ribosomal protein S10p/S20e OS088_RS10015 PF00860 Permease family OS088_RS10020 PF01131 DNA topoisomerase OS088_RS10020 PF01751 Toprim domain OS088_RS10035 PF06800 Sugar transport protein OS088_RS10060 PF00873 AcrB/AcrD/AcrF family OS088_RS10065 PF02388 FemAB family OS088_RS10080 PF01047 MarR family OS088_RS10095 PF01695 IstB-like ATP binding protein OS088_RS10115 PF06463 Molybdenum Cofactor Synthesis C OS088_RS10115 PF04055 Radical SAM superfamily OS088_RS10120 PF12804 MobA-like NTP transferase domain OS088_RS10125 PF02597 ThiS family OS088_RS10130 PF02391 MoaE protein OS088_RS10135 PF03205 Molybdopterin guanine dinucleotide synthesis protein B OS088_RS10140 PF03453 MoeA N-terminal region (domain I and II) OS088_RS10140 PF00994 Probable molybdopterin binding domain OS088_RS10140 PF03454 MoeA C-terminal region (domain IV) OS088_RS10145 PF01967 MoaC family OS088_RS10150 PF00994 Probable molybdopterin binding domain OS088_RS10155 PF00899 ThiF family OS088_RS10160 PF03459 TOBE domain OS088_RS10160 PF00005 ABC transporter OS088_RS10165 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS10175 PF02634 FdhD/NarQ family OS088_RS10185 PF02632 BioY family OS088_RS10190 PF01156 Inosine-uridine preferring nucleoside hydrolase OS088_RS10200 PF08028 Acyl-CoA dehydrogenase, C-terminal domain OS088_RS10200 PF02770 Acyl-CoA dehydrogenase, middle domain OS088_RS10200 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OS088_RS10205 PF03253 Urea transporter OS088_RS10210 PF00547 Urease, gamma subunit OS088_RS10215 PF00699 Urease beta subunit OS088_RS10220 PF01979 Amidohydrolase family OS088_RS10220 PF00449 Urease alpha-subunit, N-terminal domain OS088_RS10225 PF05194 UreE urease accessory protein, C-terminal domain OS088_RS10225 PF02814 UreE urease accessory protein, N-terminal domain OS088_RS10230 PF01730 UreF OS088_RS10235 PF02492 CobW/HypB/UreG, nucleotide-binding domain OS088_RS10240 PF01774 UreD urease accessory protein OS088_RS10265 PF05257 CHAP domain OS088_RS10275 PF03553 Na+/H+ antiporter family OS088_RS10280 PF02558 Ketopantoate reductase PanE/ApbA OS088_RS10280 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain OS088_RS10290 PF05257 CHAP domain OS088_RS10295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OS088_RS10295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OS088_RS10300 PF01494 FAD binding domain OS088_RS10305 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase OS088_RS10305 PF13457 GW (Gly-Tryp) dipeptide domain OS088_RS10320 PF12838 4Fe-4S dicluster domain OS088_RS10320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain OS088_RS10320 PF00384 Molybdopterin oxidoreductase OS088_RS10320 PF01568 Molydopterin dinucleotide binding domain OS088_RS10320 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region OS088_RS10325 PF03816 Cell envelope-related transcriptional attenuator domain OS088_RS10340 PF02517 CPBP intramembrane metalloprotease OS088_RS10355 PF00324 Amino acid permease OS088_RS10375 PF13419 Haloacid dehalogenase-like hydrolase OS088_RS10380 PF01758 Sodium Bile acid symporter family OS088_RS10390 PF00367 phosphotransferase system, EIIB OS088_RS10390 PF02378 Phosphotransferase system, EIIC OS088_RS10395 PF01418 Helix-turn-helix domain, rpiR family OS088_RS10395 PF01380 SIS domain OS088_RS10420 PF07687 Peptidase dimerisation domain OS088_RS10420 PF01546 Peptidase family M20/M25/M40 OS088_RS10425 PF01979 Amidohydrolase family OS088_RS10430 PF01175 Urocanase Rossmann-like domain OS088_RS10430 PF17392 Urocanase C-terminal domain OS088_RS10430 PF17391 Urocanase N-terminal domain OS088_RS10435 PF03466 LysR substrate binding domain OS088_RS10435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OS088_RS10440 PF00491 Arginase family OS088_RS10450 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) OS088_RS10455 PF03475 3-alpha domain OS088_RS10455 PF03473 MOSC domain OS088_RS10465 PF02694 Uncharacterised BCR, YnfA/UPF0060 family OS088_RS10480 PF13732 Domain of unknown function (DUF4162) OS088_RS10480 PF00005 ABC transporter OS088_RS10485 PF05656 Protein of unknown function (DUF805) OS088_RS10490 PF02245 Methylpurine-DNA glycosylase (MPG) OS088_RS10495 PF03616 Sodium/glutamate symporter OS088_RS10500 PF01070 FMN-dependent dehydrogenase OS088_RS10505 PF01544 CorA-like Mg2+ transporter protein OS088_RS10520 PF00934 PE family OS088_RS10520 PF07859 alpha/beta hydrolase fold OS088_RS10545 PF07690 Major Facilitator Superfamily OS088_RS10560 PF12802 MarR family OS088_RS10570 PF00005 ABC transporter OS088_RS10575 PF02687 FtsX-like permease family OS088_RS10580 PF00072 Response regulator receiver domain OS088_RS10580 PF00486 Transcriptional regulatory protein, C terminal OS088_RS10585 PF00512 His Kinase A (phospho-acceptor) domain OS088_RS10585 PF00672 HAMP domain OS088_RS10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS10590 PF04397 LytTr DNA-binding domain OS088_RS10605 PF00005 ABC transporter OS088_RS10615 PF06039 Malate:quinone oxidoreductase (Mqo) OS088_RS10620 PF02652 L-lactate permease OS088_RS10635 PF13673 Acetyltransferase (GNAT) domain OS088_RS10640 PF08240 Alcohol dehydrogenase GroES-like domain OS088_RS10640 PF00107 Zinc-binding dehydrogenase OS088_RS10660 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS10690 PF02378 Phosphotransferase system, EIIC OS088_RS10690 PF00367 phosphotransferase system, EIIB OS088_RS10705 PF16242 Pyridoxamine 5'-phosphate oxidase like OS088_RS10715 PF00375 Sodium:dicarboxylate symporter family OS088_RS10725 PF01047 MarR family OS088_RS10730 PF00011 Hsp20/alpha crystallin family OS088_RS10735 PF07690 Major Facilitator Superfamily OS088_RS10745 PF13411 MerR HTH family regulatory protein OS088_RS10745 PF07739 TipAS antibiotic-recognition domain OS088_RS10750 PF00196 Bacterial regulatory proteins, luxR family OS088_RS10750 PF00072 Response regulator receiver domain OS088_RS10755 PF07730 Histidine kinase OS088_RS10755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS10765 PF02665 Nitrate reductase gamma subunit OS088_RS10770 PF02613 Nitrate reductase delta subunit OS088_RS10775 PF13247 4Fe-4S dicluster domain OS088_RS10775 PF14711 Respiratory nitrate reductase beta C-terminal OS088_RS10780 PF00384 Molybdopterin oxidoreductase OS088_RS10780 PF14710 Respiratory nitrate reductase alpha N-terminal OS088_RS10780 PF01568 Molydopterin dinucleotide binding domain OS088_RS10785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases OS088_RS10790 PF00355 Rieske [2Fe-2S] domain OS088_RS10795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain OS088_RS10795 PF04324 BFD-like [2Fe-2S] binding domain OS088_RS10795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain OS088_RS10795 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS10795 PF18267 Rubredoxin NAD+ reductase C-terminal domain OS088_RS10805 PF00583 Acetyltransferase (GNAT) family OS088_RS10810 PF01226 Formate/nitrite transporter OS088_RS10825 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment OS088_RS10825 PF01297 Zinc-uptake complex component A periplasmic OS088_RS10835 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system OS088_RS10860 PF02388 FemAB family OS088_RS10865 PF00005 ABC transporter OS088_RS10870 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS10875 PF00497 Bacterial extracellular solute-binding proteins, family 3 OS088_RS10890 PF00300 Histidine phosphatase superfamily (branch 1) OS088_RS10895 PF01545 Cation efflux family OS088_RS10895 PF16916 Dimerisation domain of Zinc Transporter OS088_RS10905 PF02216 B domain OS088_RS10905 PF11621 C3 binding domain 4 of IgG-bind protein SBI OS088_RS10910 PF07968 Leukocidin/Hemolysin toxin family OS088_RS10915 PF07968 Leukocidin/Hemolysin toxin family OS088_RS10920 PF07968 Leukocidin/Hemolysin toxin family OS088_RS10930 PF03744 6-carboxyhexanoate--CoA ligase OS088_RS10935 PF00155 Aminotransferase class I and II OS088_RS10940 PF04055 Radical SAM superfamily OS088_RS10940 PF06968 Biotin and Thiamin Synthesis associated domain OS088_RS10945 PF00202 Aminotransferase class-III OS088_RS10970 PF02595 Glycerate kinase family OS088_RS10980 PF07690 Major Facilitator Superfamily OS088_RS11000 PF00324 Amino acid permease OS088_RS11005 PF00999 Sodium/hydrogen exchanger family OS088_RS11010 PF13520 Amino acid permease OS088_RS11015 PF00144 Beta-lactamase OS088_RS11025 PF02558 Ketopantoate reductase PanE/ApbA OS088_RS11025 PF08546 Ketopantoate reductase PanE/ApbA C terminal OS088_RS11030 PF07690 Major Facilitator Superfamily OS088_RS11035 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS11040 PF04069 Substrate binding domain of ABC-type glycine betaine transport system OS088_RS11045 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS11050 PF00005 ABC transporter OS088_RS11050 PF00571 CBS domain OS088_RS11065 PF08818 Domain of unknown function (DU1801) OS088_RS11070 PF13520 Amino acid permease OS088_RS11075 PF00135 Carboxylesterase family OS088_RS11080 PF07690 Major Facilitator Superfamily OS088_RS11085 PF03649 Uncharacterised protein family (UPF0014) OS088_RS11090 PF00005 ABC transporter OS088_RS11095 PF05343 M42 glutamyl aminopeptidase OS088_RS11100 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system OS088_RS11110 PF06998 Protein of unknown function (DUF1307) OS088_RS11115 PF01645 Conserved region in glutamate synthase OS088_RS11125 PF07690 Major Facilitator Superfamily OS088_RS11130 PF00005 ABC transporter OS088_RS11135 PF00005 ABC transporter OS088_RS11140 PF12911 N-terminal TM domain of oligopeptide transport permease C OS088_RS11140 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS11145 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS11150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle OS088_RS11155 PF10100 Staphylopine dehydrogenase OS088_RS11180 PF03806 AbgT putative transporter family OS088_RS11185 PF02627 Carboxymuconolactone decarboxylase family OS088_RS11210 PF00106 short chain dehydrogenase OS088_RS11215 PF00665 Integrase core domain OS088_RS11215 PF13936 Helix-turn-helix domain OS088_RS11250 PF04507 Csa1 family OS088_RS11260 PF04507 Csa1 family OS088_RS11270 PF00293 NUDIX domain OS088_RS11275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II OS088_RS11275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I OS088_RS11275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain OS088_RS11275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III OS088_RS11300 PF01695 IstB-like ATP binding protein OS088_RS11320 PF01695 IstB-like ATP binding protein OS088_RS11325 PF00746 LPXTG cell wall anchor motif OS088_RS11325 PF04650 YSIRK type signal peptide OS088_RS11325 PF17041 E domain OS088_RS11325 PF07501 G5 domain OS088_RS11325 PF07501 G5 domain OS088_RS11325 PF04650 YSIRK type signal peptide OS088_RS11325 PF17041 E domain OS088_RS11325 PF00746 LPXTG cell wall anchor motif OS088_RS11330 PF13463 Winged helix DNA-binding domain OS088_RS11340 PF00483 Nucleotidyl transferase OS088_RS11345 PF17961 Bacterial Ig domain OS088_RS11345 PF02986 Fibronectin binding repeat OS088_RS11345 PF00746 LPXTG cell wall anchor motif OS088_RS11345 PF10425 C-terminus of bacterial fibrinogen-binding adhesin OS088_RS11345 PF04650 YSIRK type signal peptide OS088_RS11355 PF02986 Fibronectin binding repeat OS088_RS11355 PF17961 Bacterial Ig domain OS088_RS11355 PF10425 C-terminus of bacterial fibrinogen-binding adhesin OS088_RS11355 PF04650 YSIRK type signal peptide OS088_RS11355 PF00746 LPXTG cell wall anchor motif OS088_RS11365 PF02447 GntP family permease OS088_RS11370 PF00370 FGGY family of carbohydrate kinases, N-terminal domain OS088_RS11370 PF02782 FGGY family of carbohydrate kinases, C-terminal domain OS088_RS11375 PF07729 FCD domain OS088_RS11375 PF00392 Bacterial regulatory proteins, gntR family OS088_RS11380 PF13411 MerR HTH family regulatory protein OS088_RS11385 PF04607 Region found in RelA / SpoT proteins OS088_RS11390 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) OS088_RS11400 PF07690 Major Facilitator Superfamily OS088_RS11405 PF09335 SNARE associated Golgi protein OS088_RS11415 PF00005 ABC transporter OS088_RS11425 PF06874 Firmicute fructose-1,6-bisphosphatase OS088_RS11435 PF01738 Dienelactone hydrolase family OS088_RS11440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OS088_RS11445 PF01047 MarR family OS088_RS11455 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OS088_RS11460 PF00881 Nitroreductase family OS088_RS11465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OS088_RS11465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OS088_RS11480 PF00005 ABC transporter OS088_RS11490 PF04203 Sortase domain OS088_RS11510 PF03313 Serine dehydratase alpha chain OS088_RS11515 PF01842 ACT domain OS088_RS11515 PF03315 Serine dehydratase beta chain OS088_RS11530 PF00892 EamA-like transporter family OS088_RS11535 PF07859 alpha/beta hydrolase fold OS088_RS11535 PF00934 PE family OS088_RS11555 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 OS088_RS11555 PF02378 Phosphotransferase system, EIIC OS088_RS11555 PF00367 phosphotransferase system, EIIB OS088_RS11560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OS088_RS11560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OS088_RS11560 PF00205 Thiamine pyrophosphate enzyme, central domain OS088_RS11565 PF04172 LrgB-like family OS088_RS11570 PF03788 LrgA family OS088_RS11575 PF03466 LysR substrate binding domain OS088_RS11575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family OS088_RS11585 PF05257 CHAP domain OS088_RS11590 PF00368 Hydroxymethylglutaryl-coenzyme A reductase OS088_RS11595 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal OS088_RS11595 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal OS088_RS11605 PF00004 ATPase family associated with various cellular activities (AAA) OS088_RS11605 PF07724 AAA domain (Cdc48 subfamily) OS088_RS11605 PF17871 AAA lid domain OS088_RS11605 PF10431 C-terminal, D2-small domain, of ClpB protein OS088_RS11615 PF02421 Ferrous iron transport protein B OS088_RS11615 PF17910 FeoB cytosolic helical domain OS088_RS11615 PF07670 Nucleoside recognition OS088_RS11615 PF07664 Ferrous iron transport protein B C terminus OS088_RS11625 PF03176 MMPL family OS088_RS11640 PF00171 Aldehyde dehydrogenase family OS088_RS11645 PF00132 Bacterial transferase hexapeptide (six repeats) OS088_RS11645 PF14602 Hexapeptide repeat of succinyl-transferase OS088_RS11645 PF12464 Maltose acetyltransferase OS088_RS11655 PF00403 Heavy-metal-associated domain OS088_RS11660 PF00403 Heavy-metal-associated domain OS088_RS11665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain OS088_RS11665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain OS088_RS11670 PF00155 Aminotransferase class I and II OS088_RS11675 PF01593 Flavin containing amine oxidoreductase OS088_RS11685 PF00535 Glycosyl transferase family 2 OS088_RS11690 PF01593 Flavin containing amine oxidoreductase OS088_RS11700 PF13936 Helix-turn-helix domain OS088_RS11700 PF00665 Integrase core domain OS088_RS11710 PF01757 Acyltransferase family OS088_RS11715 PF00583 Acetyltransferase (GNAT) family OS088_RS11720 PF01464 Transglycosylase SLT domain OS088_RS11740 PF01695 IstB-like ATP binding protein OS088_RS11745 PF00665 Integrase core domain OS088_RS11755 PF05979 Bacterial protein of unknown function (DUF896) OS088_RS11775 PF00440 Bacterial regulatory proteins, tetR family OS088_RS11780 PF00106 short chain dehydrogenase OS088_RS11790 PF00561 alpha/beta hydrolase fold OS088_RS11805 PF02492 CobW/HypB/UreG, nucleotide-binding domain OS088_RS11805 PF07683 Cobalamin synthesis protein cobW C-terminal domain OS088_RS11835 PF03881 Fructosamine kinase OS088_RS11840 PF01180 Dihydroorotate dehydrogenase OS088_RS11850 PF02677 Epoxyqueuosine reductase QueH OS088_RS11870 PF02261 Aspartate decarboxylase OS088_RS11875 PF02569 Pantoate-beta-alanine ligase OS088_RS11880 PF02548 Ketopantoate hydroxymethyltransferase OS088_RS11885 PF08546 Ketopantoate reductase PanE/ApbA C terminal OS088_RS11885 PF02558 Ketopantoate reductase PanE/ApbA OS088_RS11890 PF03306 Alpha-acetolactate decarboxylase OS088_RS11895 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain OS088_RS11895 PF00056 lactate/malate dehydrogenase, NAD binding domain OS088_RS11900 PF13520 Amino acid permease OS088_RS11905 PF00202 Aminotransferase class-III OS088_RS11915 PF00274 Fructose-bisphosphate aldolase class-I OS088_RS11920 PF06039 Malate:quinone oxidoreductase (Mqo) OS088_RS11930 PF13193 AMP-binding enzyme C-terminal domain OS088_RS11930 PF00501 AMP-binding enzyme OS088_RS11945 PF05199 GMC oxidoreductase OS088_RS11945 PF00732 GMC oxidoreductase OS088_RS11950 PF00171 Aldehyde dehydrogenase family OS088_RS11965 PF02028 BCCT, betaine/carnitine/choline family transporter OS088_RS11985 PF03477 ATP cone domain OS088_RS11985 PF13597 Anaerobic ribonucleoside-triphosphate reductase OS088_RS11990 PF03600 Citrate transporter OS088_RS12000 PF14824 Sirohaem biosynthesis protein central OS088_RS12005 PF00258 Flavodoxin OS088_RS12005 PF00175 Oxidoreductase NAD-binding domain OS088_RS12005 PF00667 FAD binding domain OS088_RS12015 PF00255 Glutathione peroxidase OS088_RS12035 PF00005 ABC transporter OS088_RS12040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS12045 PF00486 Transcriptional regulatory protein, C terminal OS088_RS12045 PF00072 Response regulator receiver domain OS088_RS12055 PF00245 Alkaline phosphatase OS088_RS12065 PF01047 MarR family OS088_RS12075 PF17961 Bacterial Ig domain OS088_RS12075 PF10425 C-terminus of bacterial fibrinogen-binding adhesin OS088_RS12075 PF04650 YSIRK type signal peptide OS088_RS12075 PF00746 LPXTG cell wall anchor motif OS088_RS12080 PF00027 Cyclic nucleotide-binding domain OS088_RS12080 PF13545 Crp-like helix-turn-helix domain OS088_RS12085 PF00696 Amino acid kinase family OS088_RS12090 PF13520 Amino acid permease OS088_RS12095 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OS088_RS12095 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OS088_RS12110 PF02863 Arginine repressor, C-terminal domain OS088_RS12110 PF01316 Arginine repressor, DNA binding domain OS088_RS12115 PF07504 Fungalysin/Thermolysin Propeptide Motif OS088_RS12115 PF03413 Peptidase propeptide and YPEB domain OS088_RS12115 PF01447 Thermolysin metallopeptidase, catalytic domain OS088_RS12115 PF02868 Thermolysin metallopeptidase, alpha-helical domain OS088_RS12130 PF08279 HTH domain OS088_RS12130 PF05043 Mga helix-turn-helix domain OS088_RS12130 PF00874 PRD domain OS088_RS12130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OS088_RS12135 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OS088_RS12135 PF02378 Phosphotransferase system, EIIC OS088_RS12135 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OS088_RS12140 PF01238 Phosphomannose isomerase type I OS088_RS12145 PF01061 ABC-2 type transporter OS088_RS12150 PF05257 CHAP domain OS088_RS12150 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase OS088_RS12155 PF00857 Isochorismatase family OS088_RS12155 PF00550 Phosphopantetheine attachment site OS088_RS12160 PF01468 GA module OS088_RS12170 PF00534 Glycosyl transferases group 1 OS088_RS12175 PF07517 SecA DEAD-like domain OS088_RS12175 PF01043 SecA preprotein cross-linking domain OS088_RS12175 PF07516 SecA Wing and Scaffold domain OS088_RS12180 PF15432 Accessory Sec secretory system ASP3 OS088_RS12185 PF16929 Accessory Sec system GspB-transporter OS088_RS12190 PF16993 Accessory Sec system protein Asp1 OS088_RS12195 PF00344 SecY translocase OS088_RS12200 PF00746 LPXTG cell wall anchor motif OS088_RS12200 PF00746 LPXTG cell wall anchor motif OS088_RS12205 PF01613 Flavin reductase like domain OS088_RS12225 PF01613 Flavin reductase like domain OS088_RS12230 PF01625 Peptide methionine sulfoxide reductase OS088_RS12230 PF01641 SelR domain OS088_RS12245 PF13614 AAA domain OS088_RS12250 PF02706 Chain length determinant protein OS088_RS12260 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) OS088_RS12265 PF18665 Tetracyclin repressor-like, C-terminal domain OS088_RS12265 PF00440 Bacterial regulatory proteins, tetR family OS088_RS12270 PF00535 Glycosyl transferase family 2 OS088_RS12280 PF01522 Polysaccharide deacetylase OS088_RS12285 PF01757 Acyltransferase family OS088_RS12290 PF04650 YSIRK type signal peptide OS088_RS12305 PF00977 Histidine biosynthesis protein OS088_RS12310 PF00117 Glutamine amidotransferase class-I OS088_RS12315 PF00475 Imidazoleglycerol-phosphate dehydratase OS088_RS12320 PF00155 Aminotransferase class I and II OS088_RS12325 PF00815 Histidinol dehydrogenase OS088_RS12330 PF01634 ATP phosphoribosyltransferase OS088_RS12335 PF13393 Histidyl-tRNA synthetase OS088_RS12350 PF04264 YceI-like domain OS088_RS12355 PF08450 SMP-30/Gluconolactonase/LRE-like region OS088_RS12360 PF00581 Rhodanese-like domain OS088_RS12360 PF12368 Rhodanase C-terminal OS088_RS12360 PF17773 UPF0176 acylphosphatase like domain OS088_RS12365 PF01470 Pyroglutamyl peptidase OS088_RS12375 PF05738 Cna protein B-type domain OS088_RS12375 PF05737 Collagen binding domain OS088_RS12375 PF17802 Prealbumin-like fold domain OS088_RS12380 PF00939 Sodium:sulfate symporter transmembrane region OS088_RS12385 PF00892 EamA-like transporter family OS088_RS12395 PF03824 High-affinity nickel-transport protein OS088_RS12410 PF00005 ABC transporter OS088_RS12415 PF02687 FtsX-like permease family OS088_RS12450 PF00313 'Cold-shock' DNA-binding domain OS088_RS12470 PF17762 HTH domain found in ParB protein OS088_RS12470 PF02195 ParB-like nuclease domain OS088_RS12475 PF02527 rRNA small subunit methyltransferase G OS088_RS12480 PF01134 Glucose inhibited division protein A OS088_RS12480 PF13932 GidA associated domain OS088_RS12485 PF01926 50S ribosome-binding GTPase OS088_RS12485 PF12631 MnmE helical domain OS088_RS12485 PF10396 GTP-binding protein TrmE N-terminus OS088_RS12490 PF00825 Ribonuclease P OS088_RS12495 PF00468 Ribosomal protein L34 OS088_RS12500 PF00308 Bacterial dnaA protein OS088_RS12500 PF08299 Bacterial dnaA protein helix-turn-helix OS088_RS12500 PF11638 DnaA N-terminal domain OS088_RS12505 PF00712 DNA polymerase III beta subunit, N-terminal domain OS088_RS12505 PF02767 DNA polymerase III beta subunit, central domain OS088_RS12505 PF02768 DNA polymerase III beta subunit, C-terminal domain OS088_RS12515 PF02463 RecF/RecN/SMC N terminal domain OS088_RS12520 PF00204 DNA gyrase B OS088_RS12520 PF00986 DNA gyrase B subunit, carboxyl terminus OS088_RS12520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS12520 PF01751 Toprim domain OS088_RS12525 PF00521 DNA gyrase/topoisomerase IV, subunit A OS088_RS12525 PF03989 DNA gyrase C-terminal domain, beta-propeller OS088_RS12530 PF01256 Carbohydrate kinase OS088_RS12535 PF00221 Aromatic amino acid lyase OS088_RS12540 PF02403 Seryl-tRNA synthetase N-terminal domain OS088_RS12540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) OS088_RS12555 PF00561 alpha/beta hydrolase fold OS088_RS12565 PF01368 DHH family OS088_RS12565 PF02272 DHHA1 domain OS088_RS12570 PF03948 Ribosomal protein L9, C-terminal domain OS088_RS12570 PF01281 Ribosomal protein L9, N-terminal domain OS088_RS12575 PF03796 DnaB-like helicase C terminal domain OS088_RS12575 PF00772 DnaB-like helicase N terminal domain OS088_RS12580 PF00709 Adenylosuccinate synthetase OS088_RS12595 PF00072 Response regulator receiver domain OS088_RS12595 PF00486 Transcriptional regulatory protein, C terminal OS088_RS12600 PF00672 HAMP domain OS088_RS12600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS12600 PF00512 His Kinase A (phospho-acceptor) domain OS088_RS12600 PF13426 PAS domain OS088_RS12605 PF07435 YycH protein OS088_RS12615 PF00753 Metallo-beta-lactamase superfamily OS088_RS12620 PF02872 5'-nucleotidase, C-terminal domain OS088_RS12620 PF00149 Calcineurin-like phosphoesterase OS088_RS12625 PF02590 Predicted SPOUT methyltransferase OS088_RS12640 PF13610 DDE domain OS088_RS12660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OS088_RS12665 PF07827 KNTase C-terminal domain OS088_RS12670 PF13610 DDE domain OS088_RS12675 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal OS088_RS12675 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal OS088_RS12680 PF03009 Glycerophosphoryl diester phosphodiesterase family OS088_RS12685 PF01575 MaoC like domain OS088_RS12690 PF05223 NTF2-like N-terminal transpeptidase domain OS088_RS12690 PF00905 Penicillin binding protein transpeptidase domain OS088_RS12690 PF03717 Penicillin-binding Protein dimerisation domain OS088_RS12695 PF05569 BlaR1 peptidase M56 OS088_RS12695 PF00905 Penicillin binding protein transpeptidase domain OS088_RS12700 PF03965 Penicillinase repressor OS088_RS12710 PF00480 ROK family OS088_RS12720 PF13686 DsrE/DsrF/DrsH-like family OS088_RS12725 PF02583 Metal-sensitive transcriptional repressor OS088_RS12740 PF00398 Ribosomal RNA adenine dimethylase OS088_RS12745 PF01909 Nucleotidyltransferase domain OS088_RS12745 PF13427 Domain of unknown function (DUF4111) OS088_RS12760 PF02899 Phage integrase, N-terminal SAM-like domain OS088_RS12760 PF00589 Phage integrase family OS088_RS12765 PF04002 RadC-like JAB domain OS088_RS12840 PF01695 IstB-like ATP binding protein OS088_RS12870 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS12875 PF01207 Dihydrouridine synthase (Dus) OS088_RS12905 PF00388 Phosphatidylinositol-specific phospholipase C, X domain OS088_RS12910 PF04507 Csa1 family OS088_RS12915 PF04507 Csa1 family OS088_RS12920 PF04507 Csa1 family OS088_RS12925 PF04507 Csa1 family OS088_RS12930 PF12833 Helix-turn-helix domain OS088_RS12935 PF07687 Peptidase dimerisation domain OS088_RS12935 PF01546 Peptidase family M20/M25/M40 OS088_RS12940 PF07690 Major Facilitator Superfamily OS088_RS12950 PF02690 Na+/Pi-cotransporter OS088_RS12955 PF06100 MCRA family OS088_RS12965 PF02652 L-lactate permease OS088_RS12970 PF04650 YSIRK type signal peptide OS088_RS12970 PF03373 Octapeptide repeat OS088_RS12970 PF01476 LysM domain OS088_RS12970 PF00746 LPXTG cell wall anchor motif OS088_RS12970 PF02216 B domain OS088_RS12980 PF01032 FecCD transport family OS088_RS12985 PF01032 FecCD transport family OS088_RS12990 PF01497 Periplasmic binding protein OS088_RS12995 PF00291 Pyridoxal-phosphate dependent enzyme OS088_RS13000 PF02423 Ornithine cyclodeaminase/mu-crystallin family OS088_RS13005 PF04183 IucA / IucC family OS088_RS13005 PF06276 Ferric iron reductase FhuF-like transporter OS088_RS13010 PF00083 Sugar (and other) transporter OS088_RS13010 PF07690 Major Facilitator Superfamily OS088_RS13015 PF04183 IucA / IucC family OS088_RS13015 PF06276 Ferric iron reductase FhuF-like transporter OS088_RS13020 PF04183 IucA / IucC family OS088_RS13020 PF06276 Ferric iron reductase FhuF-like transporter OS088_RS13025 PF03328 HpcH/HpaI aldolase/citrate lyase family OS088_RS13030 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain OS088_RS13030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain OS088_RS13035 PF02195 ParB-like nuclease domain OS088_RS13060 PF01370 NAD dependent epimerase/dehydratase family OS088_RS13065 PF02397 Bacterial sugar transferase OS088_RS13070 PF00534 Glycosyl transferases group 1 OS088_RS13085 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain OS088_RS13085 PF02777 Iron/manganese superoxide dismutases, C-terminal domain OS088_RS13090 PF07702 UTRA domain OS088_RS13090 PF00392 Bacterial regulatory proteins, gntR family OS088_RS13095 PF01048 Phosphorylase superfamily OS088_RS13100 PF07690 Major Facilitator Superfamily OS088_RS13105 PF01791 DeoC/LacD family aldolase OS088_RS13110 PF01676 Metalloenzyme superfamily OS088_RS13115 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS13120 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS13125 PF00005 ABC transporter OS088_RS13140 PF00149 Calcineurin-like phosphoesterase OS088_RS13140 PF02872 5'-nucleotidase, C-terminal domain OS088_RS13150 PF00465 Iron-containing alcohol dehydrogenase OS088_RS13150 PF00171 Aldehyde dehydrogenase family OS088_RS13155 PF02706 Chain length determinant protein OS088_RS13160 PF13614 AAA domain OS088_RS13170 PF02719 Polysaccharide biosynthesis protein OS088_RS13175 PF02719 Polysaccharide biosynthesis protein OS088_RS13175 PF08485 Polysaccharide biosynthesis protein C-terminal OS088_RS13180 PF01370 NAD dependent epimerase/dehydratase family OS088_RS13185 PF02350 UDP-N-acetylglucosamine 2-epimerase OS088_RS13200 PF12464 Maltose acetyltransferase OS088_RS13200 PF00132 Bacterial transferase hexapeptide (six repeats) OS088_RS13200 PF14602 Hexapeptide repeat of succinyl-transferase OS088_RS13215 PF02397 Bacterial sugar transferase OS088_RS13225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain OS088_RS13225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain OS088_RS13225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain OS088_RS13230 PF02350 UDP-N-acetylglucosamine 2-epimerase OS088_RS13235 PF03992 Antibiotic biosynthesis monooxygenase OS088_RS13240 PF04304 Protein of unknown function (DUF454) OS088_RS13245 PF00171 Aldehyde dehydrogenase family OS088_RS13250 PF01545 Cation efflux family OS088_RS13250 PF16916 Dimerisation domain of Zinc Transporter OS088_RS13265 PF00005 ABC transporter OS088_RS13275 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS13305 PF00696 Amino acid kinase family OS088_RS13310 PF01960 ArgJ family OS088_RS13315 PF01118 Semialdehyde dehydrogenase, NAD binding domain OS088_RS13315 PF02774 Semialdehyde dehydrogenase, dimerisation domain OS088_RS13320 PF00202 Aminotransferase class-III OS088_RS13330 PF05525 Branched-chain amino acid transport protein OS088_RS13335 PF00857 Isochorismatase family OS088_RS13340 PF00205 Thiamine pyrophosphate enzyme, central domain OS088_RS13340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain OS088_RS13340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain OS088_RS13350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 OS088_RS13350 PF00367 phosphotransferase system, EIIB OS088_RS13350 PF02378 Phosphotransferase system, EIIC OS088_RS13365 PF00367 phosphotransferase system, EIIB OS088_RS13365 PF02378 Phosphotransferase system, EIIC OS088_RS13370 PF01418 Helix-turn-helix domain, rpiR family OS088_RS13370 PF01380 SIS domain OS088_RS13380 PF18766 SWI2/SNF2 ATPase OS088_RS13380 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) OS088_RS13380 PF12008 Type I restriction and modification enzyme - subunit R C terminal OS088_RS13400 PF08352 Oligopeptide/dipeptide transporter, C-terminal region OS088_RS13400 PF00005 ABC transporter OS088_RS13405 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS13410 PF12911 N-terminal TM domain of oligopeptide transport permease C OS088_RS13410 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS13425 PF04507 Csa1 family OS088_RS13430 PF02525 Flavodoxin-like fold OS088_RS13435 PF01551 Peptidase family M23 OS088_RS13435 PF08460 Bacterial SH3 domain OS088_RS13440 PF00005 ABC transporter OS088_RS13440 PF03459 TOBE domain OS088_RS13440 PF17912 MalK OB fold domain OS088_RS13450 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS13455 PF00528 Binding-protein-dependent transport system inner membrane component OS088_RS13460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain OS088_RS13460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OS088_RS13465 PF02894 Oxidoreductase family, C-terminal alpha/beta domain OS088_RS13465 PF01408 Oxidoreductase family, NAD-binding Rossmann fold OS088_RS13475 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family OS088_RS13480 PF07690 Major Facilitator Superfamily OS088_RS13485 PF00072 Response regulator receiver domain OS088_RS13485 PF12833 Helix-turn-helix domain OS088_RS13490 PF06580 Histidine kinase OS088_RS13500 PF01228 Glycine radical OS088_RS13500 PF02901 Pyruvate formate lyase-like OS088_RS13505 PF04055 Radical SAM superfamily OS088_RS13525 PF04022 Staphylocoagulase repeat OS088_RS13525 PF08764 Staphylococcus aureus coagulase OS088_RS13535 PF00108 Thiolase, N-terminal domain OS088_RS13535 PF02803 Thiolase, C-terminal domain OS088_RS13540 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain OS088_RS13540 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain OS088_RS13545 PF02770 Acyl-CoA dehydrogenase, middle domain OS088_RS13545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain OS088_RS13545 PF00441 Acyl-CoA dehydrogenase, C-terminal domain OS088_RS13550 PF13193 AMP-binding enzyme C-terminal domain OS088_RS13550 PF00501 AMP-binding enzyme OS088_RS13555 PF01144 Coenzyme A transferase OS088_RS13570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle OS088_RS13575 PF04343 Protein of unknown function, DUF488 OS088_RS13585 PF00175 Oxidoreductase NAD-binding domain OS088_RS13585 PF00042 Globin OS088_RS13585 PF00970 Oxidoreductase FAD-binding domain OS088_RS13595 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain OS088_RS13595 PF00056 lactate/malate dehydrogenase, NAD binding domain OS088_RS13600 PF00367 phosphotransferase system, EIIB OS088_RS13600 PF02378 Phosphotransferase system, EIIC OS088_RS13600 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 OS088_RS13605 PF01156 Inosine-uridine preferring nucleoside hydrolase OS088_RS13625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit OS088_RS13630 PF03611 PTS system sugar-specific permease component OS088_RS13635 PF08240 Alcohol dehydrogenase GroES-like domain OS088_RS13635 PF00107 Zinc-binding dehydrogenase OS088_RS13645 PF08240 Alcohol dehydrogenase GroES-like domain OS088_RS13645 PF00107 Zinc-binding dehydrogenase OS088_RS13650 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS088_RS13655 PF08240 Alcohol dehydrogenase GroES-like domain OS088_RS13655 PF00107 Zinc-binding dehydrogenase OS088_RS13660 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase OS088_RS13665 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase OS088_RS13670 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase OS088_RS13675 PF00107 Zinc-binding dehydrogenase OS088_RS13675 PF08240 Alcohol dehydrogenase GroES-like domain OS088_RS13680 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase OS088_RS13685 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 OS088_RS13685 PF00535 Glycosyl transferase family 2 OS088_RS13700 PF01814 Hemerythrin HHE cation binding domain OS088_RS13700 PF04405 Domain of Unknown function (DUF542) OS088_RS13705 PF07694 5TMR of 5TMR-LYT OS088_RS13705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase OS088_RS13705 PF06580 Histidine kinase OS088_RS13710 PF04397 LytTr DNA-binding domain OS088_RS13710 PF00072 Response regulator receiver domain OS088_RS13715 PF03788 LrgA family OS088_RS13720 PF04172 LrgB-like family OS088_RS13725 PF00115 Cytochrome C and Quinol oxidase polypeptide I OS088_RS13730 PF00392 Bacterial regulatory proteins, gntR family OS088_RS13730 PF00155 Aminotransferase class I and II OS088_RS13735 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 OS088_RS13735 PF00367 phosphotransferase system, EIIB OS088_RS13735 PF02378 Phosphotransferase system, EIIC OS088_RS13740 PF00232 Glycosyl hydrolase family 1 OS088_RS13745 PF13649 Methyltransferase domain OS088_RS13755 PF00294 pfkB family carbohydrate kinase OS088_RS13760 PF05025 RbsD / FucU transport protein family OS088_RS13765 PF06800 Sugar transport protein OS088_RS13770 PF00356 Bacterial regulatory proteins, lacI family OS088_RS13770 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family OS088_RS13785 PF07690 Major Facilitator Superfamily OS088_RS13790 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family OS088_RS13795 PF01551 Peptidase family M23 OS088_RS13800 PF00005 ABC transporter OS088_RS13820 PF01476 LysM domain OS088_RS13820 PF05257 CHAP domain OS088_RS13825 PF06013 Proteins of 100 residues with WXG OS088_RS13835 PF10661 WXG100 protein secretion system (Wss), protein EssA OS088_RS13840 PF08817 WXG100 protein secretion system (Wss), protein YukD OS088_RS13845 PF10140 WXG100 protein secretion system (Wss), protein YukC OS088_RS13850 PF01580 FtsK/SpoIIIE family OS088_RS13850 PF12538 DNA transporter OS088_RS13895 PF04634 Protein of unknown function, DUF600 OS088_RS13900 PF04634 Protein of unknown function, DUF600 OS088_RS13940 PF04634 Protein of unknown function, DUF600 OS088_RS13960 PF05525 Branched-chain amino acid transport protein OS088_RS13965 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) OS088_RS13970 PF02687 FtsX-like permease family OS088_RS13975 PF00005 ABC transporter OS088_RS13995 PF04227 Indigoidine synthase A like protein OS088_RS14000 PF01773 Na+ dependent nucleoside transporter N-terminus OS088_RS14000 PF07662 Na+ dependent nucleoside transporter C-terminus OS088_RS14005 PF00474 Sodium:solute symporter family OS088_RS14010 PF00701 Dihydrodipicolinate synthetase family OS088_RS14015 PF00480 ROK family OS088_RS14020 PF01380 SIS domain OS088_RS14020 PF01418 Helix-turn-helix domain, rpiR family OS088_RS14025 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase OS088_RS14030 PF07670 Nucleoside recognition OS088_RS14035 PF00665 Integrase core domain OS088_RS14035 PF13936 Helix-turn-helix domain OS088_RS14040 PF04650 YSIRK type signal peptide OS088_RS14050 PF00724 NADH:flavin oxidoreductase / NADH oxidase family OS088_RS14060 PF00296 Luciferase-like monooxygenase OS088_RS14065 PF01597 Glycine cleavage H-protein OS088_RS14070 PF01661 Macro domain OS088_RS14080 PF03099 Biotin/lipoate A/B protein ligase family OS088_RS14080 PF10437 Bacterial lipoate protein ligase C-terminus OS088_RS14085 PF16363 GDP-mannose 4,6 dehydratase OS088_RS14090 PF03611 PTS system sugar-specific permease component OS088_RS14100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 OS088_RS14105 PF03123 CAT RNA binding domain OS088_RS14105 PF00874 PRD domain OS088_RS14115 PF01554 MatE OS088_RS14125 PF07690 Major Facilitator Superfamily OS088_RS14130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily OS088_RS14135 PF00296 Luciferase-like monooxygenase OS088_RS14140 PF03358 NADPH-dependent FMN reductase OS088_RS14145 PF03601 Conserved hypothetical protein 698 OS088_RS14155 PF13302 Acetyltransferase (GNAT) domain OS088_RS14160 PF09375 Imelysin OS088_RS14170 PF03239 Iron permease FTR1 family OS088_RS14175 PF00902 Sec-independent protein translocase protein (TatC) OS088_RS14180 PF02416 mttA/Hcf106 family OS088_RS14190 PF01381 Helix-turn-helix OS088_RS14200 PF00005 ABC transporter OS088_RS14215 PF02803 Thiolase, C-terminal domain OS088_RS14215 PF00108 Thiolase, N-terminal domain OS088_RS14225 PF08267 Cobalamin-independent synthase, N-terminal domain OS088_RS14225 PF01717 Cobalamin-independent synthase, Catalytic domain OS088_RS14230 PF02219 Methylenetetrahydrofolate reductase OS088_RS14230 PF02574 Homocysteine S-methyltransferase OS088_RS14235 PF01053 Cys/Met metabolism PLP-dependent enzyme OS088_RS14240 PF01053 Cys/Met metabolism PLP-dependent enzyme OS088_RS14245 PF17762 HTH domain found in ParB protein OS088_RS14245 PF02195 ParB-like nuclease domain OS088_RS14250 PF00924 Mechanosensitive ion channel OS088_RS14255 PF06107 Bacterial protein of unknown function (DUF951) OS088_RS14260 PF06071 Protein of unknown function (DUF933) OS088_RS14260 PF01926 50S ribosome-binding GTPase OS088_RS14270 PF01250 Ribosomal protein S6 OS088_RS14275 PF00436 Single-strand binding protein family OS088_RS14280 PF01084 Ribosomal protein S18 OS088_RS14295 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS14345 PF07992 Pyridine nucleotide-disulphide oxidoreductase OS088_RS14345 PF13192 Thioredoxin domain OS088_RS14350 PF10417 C-terminal domain of 1-Cys peroxiredoxin OS088_RS14350 PF00578 AhpC/TSA family OS088_RS14355 PF00881 Nitroreductase family OS088_RS14360 PF00375 Sodium:dicarboxylate symporter family OS088_RS14375 PF11181 Heat induced stress protein YflT OS088_RS14385 PF00860 Permease family OS088_RS14390 PF00571 CBS domain OS088_RS14390 PF00478 IMP dehydrogenase / GMP reductase domain OS088_RS14395 PF00958 GMP synthase C terminal domain OS088_RS14395 PF00117 Glutamine amidotransferase class-I OS088_RS14435 PF06993 Protein of unknown function (DUF1304) OS088_RS14445 PF09199 Staphylococcal superantigen-like OB-fold domain OS088_RS14445 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS14450 PF09199 Staphylococcal superantigen-like OB-fold domain OS088_RS14450 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS14450 PF09199 Staphylococcal superantigen-like OB-fold domain OS088_RS14450 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS14455 PF09199 Staphylococcal superantigen-like OB-fold domain OS088_RS14455 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS14460 PF09199 Staphylococcal superantigen-like OB-fold domain OS088_RS14460 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain OS088_RS14465 PF09199 Staphylococcal superantigen-like OB-fold domain OS088_RS14465 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain