locus-tag	class	description
OS088_RS00060	COG0523	cobalamin synthesis protein
OS088_RS00085	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
OS088_RS00095	COG5609	conserved protein (DUF2294)
OS088_RS00110	COG1647	Serine aminopeptidase, S33
OS088_RS00120	COG0733	neurotransmitter:sodium symporter activity
OS088_RS00125	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
OS088_RS00130	COG0626	cystathionine gamma-synthase activity
OS088_RS00140	COG2011	ABC-type metal ion transport system permease component
OS088_RS00145	COG1464	Belongs to the NlpA lipoprotein family
OS088_RS00160	COG0494	nUDIX hydrolase
OS088_RS00180	COG0583	DNA-binding transcription factor activity
OS088_RS00185	COG0070	glutamate synthase
OS088_RS00185	COG0067	glutamate synthase
OS088_RS00185	COG0069	glutamate synthase activity
OS088_RS00190	COG0493	'glutamate synthase
OS088_RS00200	COG1263	PTS System
OS088_RS00200	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OS088_RS00205	COG0366	Alpha amylase catalytic
OS088_RS00210	COG2188	Transcriptional regulator
OS088_RS00225	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
OS088_RS00260	COG1982	Orn Lys Arg decarboxylase major
OS088_RS00270	COG3870	Protein conserved in bacteria
OS088_RS00275	COG0470	DNA polymerase III
OS088_RS00280	COG1774	PSP1 C-terminal conserved region
OS088_RS00290	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
OS088_RS00300	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
OS088_RS00310	COG0084	hydrolase, TatD family'
OS088_RS00315	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
OS088_RS00325	COG4466	Protein conserved in bacteria
OS088_RS00335	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
OS088_RS00340	COG0251	oxidation-reduction process
OS088_RS00380	COG2244	polysaccharide biosynthetic process
OS088_RS00385	COG3956	TIGRFAM MazG family protein
OS088_RS00390	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
OS088_RS00400	COG1098	S1 RNA binding domain
OS088_RS00415	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
OS088_RS00440	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
OS088_RS00520	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OS088_RS00535	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OS088_RS00545	COG3880	PFAM UvrB UvrC protein
OS088_RS00560	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
OS088_RS00565	COG4956	integral membrane protein (PIN domain superfamily)
OS088_RS00585	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
OS088_RS00640	COG2813	Specifically methylates the guanine in position
OS088_RS00680	COG1473	amidohydrolase
OS088_RS00710	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
OS088_RS00715	COG1428	Deoxynucleoside kinase
OS088_RS00720	COG1428	Deoxynucleoside kinase
OS088_RS00730	COG0561	phosphatase activity
OS088_RS00765	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
OS088_RS00870	COG0095	Lipoate-protein ligase
OS088_RS00875	COG0083	homoserine kinase activity
OS088_RS00895	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OS088_RS01000	COG0667	Aldo Keto reductase
OS088_RS01005	COG0655	NAD(P)H dehydrogenase (quinone) activity
OS088_RS01015	COG1078	dGTPase activity
OS088_RS01050	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OS088_RS01055	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OS088_RS01155	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OS088_RS01160	COG1121	(ABC) transporter
OS088_RS01165	COG1321	iron dependent repressor
OS088_RS01175	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
OS088_RS01185	COG1682	transport, permease protein
OS088_RS01190	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
OS088_RS01200	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
OS088_RS01205	COG1686	Belongs to the peptidase S11 family
OS088_RS01210	COG1132	(ABC) transporter
OS088_RS01215	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OS088_RS01225	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
OS088_RS01230	COG1120	ATPase activity
OS088_RS01235	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OS088_RS01240	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OS088_RS01245	COG2376	Dihydroxyacetone kinase
OS088_RS01265	COG3949	Membrane
OS088_RS01285	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OS088_RS01300	COG1136	(ABC) transporter
OS088_RS01305	COG0577	efflux transmembrane transporter activity
OS088_RS01310	COG1392	Phosphate transport regulator
OS088_RS01315	COG0306	phosphate transporter
OS088_RS01320	COG3942	CHAP domain
OS088_RS01320	COG1388	LysM domain
OS088_RS01330	COG4977	sequence-specific DNA binding
OS088_RS01330	COG1917	Cupin 2, conserved barrel domain protein
OS088_RS01360	COG0583	DNA-binding transcription factor activity
OS088_RS01365	COG2814	Major facilitator Superfamily
OS088_RS01370	COG2839	Protein conserved in bacteria
OS088_RS01400	COG1611	Belongs to the LOG family
OS088_RS01420	COG4988	ABC transporter
OS088_RS01425	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
OS088_RS01435	COG0523	cobalamin synthesis protein
OS088_RS01450	COG0471	metal ion transport
OS088_RS01455	COG0415	Belongs to the DNA photolyase family
OS088_RS01485	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
OS088_RS01490	COG1349	DNA-binding transcription factor activity
OS088_RS01495	COG1105	Belongs to the carbohydrate kinase PfkB family
OS088_RS01500	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OS088_RS01500	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OS088_RS01500	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OS088_RS01505	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
OS088_RS01510	COG1253	flavin adenine dinucleotide binding
OS088_RS01515	COG0656	L-ascorbic acid biosynthetic process
OS088_RS01520	COG0463	Glycosyl transferase, family 2
OS088_RS01555	COG0720	synthase
OS088_RS01565	COG0512	Glutamine amidotransferase of anthranilate synthase
OS088_RS01565	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
OS088_RS01570	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
OS088_RS01600	COG0488	(ABC) transporter
OS088_RS01605	COG0514	ATP-dependent DNA helicase (RecQ)
OS088_RS01610	COG1125	glycine betaine transport
OS088_RS01610	COG0517	IMP dehydrogenase activity
OS088_RS01615	COG1174	glycine betaine transport
OS088_RS01640	COG3104	oligopeptide transport
OS088_RS01665	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OS088_RS01670	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
OS088_RS01675	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OS088_RS01680	COG4605	iron ion homeostasis
OS088_RS01685	COG4604	ABC transporter, ATP-binding protein
OS088_RS01690	COG4607	ABC-type enterochelin transport system periplasmic component
OS088_RS01745	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
OS088_RS01750	COG1739	Uncharacterized protein family UPF0029
OS088_RS01760	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
OS088_RS01765	COG1040	competence protein
OS088_RS01795	COG3942	CHAP domain
OS088_RS01795	COG1388	LysM domain
OS088_RS01850	COG0391	Required for morphogenesis under gluconeogenic growth conditions
OS088_RS01895	COG0281	malic enzyme
OS088_RS01945	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
OS088_RS01950	COG1647	Serine aminopeptidase, S33
OS088_RS01955	COG0557	exoribonuclease II activity
OS088_RS02025	COG1278	Cold shock
OS088_RS02065	COG0406	alpha-ribazole phosphatase activity
OS088_RS02070	COG1279	arginine transmembrane transporter activity
OS088_RS02095	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OS088_RS02100	COG1393	Belongs to the ArsC family
OS088_RS02110	COG3878	Protein conserved in bacteria
OS088_RS02115	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
OS088_RS02130	COG2011	ABC-type metal ion transport system permease component
OS088_RS02135	COG1464	Belongs to the NlpA lipoprotein family
OS088_RS02240	COG3728	DNA packaging
OS088_RS02240	COG5484	DNA packaging
OS088_RS02275	COG0396	ATPase activity
OS088_RS02280	COG0719	Fe-S assembly protein
OS088_RS02290	COG0822	iron-sulfur transferase activity
OS088_RS02310	COG1253	flavin adenine dinucleotide binding
OS088_RS02320	COG1801	Protein of unknown function DUF72
OS088_RS02325	COG0730	response to heat
OS088_RS02340	COG4470	Protein conserved in bacteria
OS088_RS02350	COG2445	Protein of unknown function DUF86
OS088_RS02380	COG1696	Membrane protein involved in D-alanine export
OS088_RS02390	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
OS088_RS02395	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
OS088_RS02400	COG4837	Protein of unknown function (DUF1462)
OS088_RS02405	COG1252	NADH dehydrogenase
OS088_RS02415	COG0316	Belongs to the HesB IscA family
OS088_RS02425	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
OS088_RS02430	COG2056	Na+-H+ antiporter family
OS088_RS02435	COG2050	protein possibly involved in aromatic compounds catabolism
OS088_RS02490	COG1098	S1 RNA binding domain
OS088_RS02495	COG1902	pentaerythritol trinitrate reductase activity
OS088_RS02510	COG0584	glycerophosphoryl diester phosphodiesterase
OS088_RS02530	COG0398	Pfam SNARE associated Golgi protein
OS088_RS02570	COG0561	phosphatase activity
OS088_RS02600	COG1881	PFAM PEBP family protein
OS088_RS02630	COG0601	transmembrane transport
OS088_RS02635	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OS088_RS02640	COG0444	Belongs to the ABC transporter superfamily
OS088_RS02645	COG4608	Belongs to the ABC transporter superfamily
OS088_RS02650	COG4166	transmembrane transport
OS088_RS02655	COG0747	negative chemotaxis
OS088_RS02660	COG0444	Belongs to the ABC transporter superfamily
OS088_RS02665	COG4608	Belongs to the ABC transporter superfamily
OS088_RS02675	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OS088_RS02700	COG3344	reverse transcriptase
OS088_RS02715	COG1164	Oligoendopeptidase f
OS088_RS02725	COG2346	COG2346, Truncated hemoglobins
OS088_RS02740	COG2357	RelA SpoT domain protein
OS088_RS02750	COG0564	pseudouridine synthase activity
OS088_RS02755	COG2239	Acts as a magnesium transporter
OS088_RS02760	COG0475	glutathione-regulated potassium exporter activity
OS088_RS02760	COG0569	domain protein
OS088_RS02770	COG0628	permease
OS088_RS02775	COG1115	amino acid carrier protein
OS088_RS02820	COG0861	Integral membrane protein TerC family
OS088_RS02830	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OS088_RS02835	COG0737	Belongs to the 5'-nucleotidase family
OS088_RS02850	COG4903	ComK protein
OS088_RS02865	COG4873	Protein conserved in bacteria
OS088_RS02900	COG2826	transposase and inactivated derivatives, IS30 family
OS088_RS02935	COG2314	TM2 domain
OS088_RS02940	COG0456	acetyltransferase
OS088_RS02945	COG1575	Belongs to the MenA family. Type 1 subfamily
OS088_RS02955	COG1169	isochorismate synthase
OS088_RS02965	COG2267	carboxylic ester hydrolase activity
OS088_RS02995	COG3594	Acyltransferase
OS088_RS03025	COG1316	TRANSCRIPTIONal
OS088_RS03070	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
OS088_RS03085	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
OS088_RS03125	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
OS088_RS03130	COG4172	Belongs to the ABC transporter superfamily
OS088_RS03135	COG4721	ABC-type cobalt transport system, permease component
OS088_RS03150	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
OS088_RS03170	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
OS088_RS03175	COG1271	oxidase subunit
OS088_RS03180	COG1294	oxidase, subunit
OS088_RS03185	COG0569	domain protein
OS088_RS03255	COG1176	ABC-type spermidine putrescine transport system, permease component I
OS088_RS03260	COG1177	transmembrane transport
OS088_RS03265	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
OS088_RS03290	COG0483	inositol monophosphate 1-phosphatase activity
OS088_RS03300	COG1217	gtp-binding protein TYPA
OS088_RS03310	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
OS088_RS03320	COG0772	Belongs to the SEDS family
OS088_RS03350	COG3679	Belongs to the UPF0342 family
OS088_RS03370	COG0742	ribosomal rna small subunit methyltransferase
OS088_RS03430	COG4509	Sortase family
OS088_RS03445	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
OS088_RS03475	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
OS088_RS03475	COG1796	DNA polymerase
OS088_RS03500	COG2009	succinate dehydrogenase
OS088_RS03505	COG1053	succinate dehydrogenase
OS088_RS03510	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
OS088_RS03625	COG1288	antiporter activity
OS088_RS03660	COG1011	Hydrolase
OS088_RS03685	COG4839	cell division protein FtsL
OS088_RS03690	COG0768	penicillin binding
OS088_RS03705	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
OS088_RS03710	COG0849	cell division
OS088_RS03725	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
OS088_RS03735	COG0762	integral membrane protein
OS088_RS03740	COG2302	S4 RNA-binding domain
OS088_RS03745	COG3599	regulation of cell shape
OS088_RS03755	COG2514	catechol 2,3-dioxygenase activity
OS088_RS03770	COG0564	pseudouridine synthase activity
OS088_RS03780	COG2233	PERMEase
OS088_RS03825	COG1293	RNA-binding protein homologous to eukaryotic snRNP
OS088_RS03840	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
OS088_RS03845	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
OS088_RS03855	COG2314	TM2 domain
OS088_RS03870	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
OS088_RS03870	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
OS088_RS03880	COG0631	protein serine/threonine phosphatase activity
OS088_RS03890	COG3344	reverse transcriptase
OS088_RS03900	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
OS088_RS03915	COG1302	Protein conserved in bacteria
OS088_RS03960	COG1196	nuclear chromosome segregation
OS088_RS03965	COG0552	protein localization to endoplasmic reticulum
OS088_RS03975	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
OS088_RS04075	COG1484	DNA-dependent DNA replication
OS088_RS04315	COG0860	N-Acetylmuramoyl-L-alanine amidase
OS088_RS04315	COG1388	LysM domain
OS088_RS04385	COG0758	DNA mediated transformation
OS088_RS04480	COG0195	Participates in both transcription termination and antitermination
OS088_RS04485	COG2740	Nucleic-acid-binding protein implicated in transcription termination
OS088_RS04510	COG0196	riboflavin kinase activity
OS088_RS04535	COG2188	Transcriptional regulator
OS088_RS04540	COG0612	Peptidase, M16
OS088_RS04545	COG0612	Peptidase, M16
OS088_RS04550	COG0300	oxidoreductase activity
OS088_RS04570	COG1058	Belongs to the CinA family
OS088_RS04570	COG1546	Belongs to the CinA family
OS088_RS04595	COG1692	metallophosphoesterase
OS088_RS04600	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
OS088_RS04600	COG0674	pyruvate-flavodoxin oxidoreductase activity
OS088_RS04605	COG1013	pyruvate-flavodoxin oxidoreductase activity
OS088_RS04640	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
OS088_RS04645	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
OS088_RS04670	COG1923	regulation of RNA biosynthetic process
OS088_RS04680	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
OS088_RS04685	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
OS088_RS04690	COG0789	Transcriptional regulator
OS088_RS04700	COG0582	viral genome integration into host DNA
OS088_RS04775	COG1484	DNA-dependent DNA replication
OS088_RS04825	COG2226	methyltransferase
OS088_RS04875	COG3344	reverse transcriptase
OS088_RS04915	COG1131	(ABC) transporter
OS088_RS04930	COG2197	response regulator
OS088_RS04940	COG1525	nuclease
OS088_RS04955	COG0527	aspartate kinase activity
OS088_RS04960	COG0460	homoserine dehydrogenase
OS088_RS04965	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
OS088_RS04990	COG0833	amino acid
OS088_RS05020	COG2340	Cysteine-rich secretory protein family
OS088_RS05055	COG4846	Membrane protein involved in cytochrome C biogenesis
OS088_RS05075	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OS088_RS05095	COG0824	Thioesterase
OS088_RS05120	COG1115	amino acid carrier protein
OS088_RS05135	COG0628	permease
OS088_RS05160	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
OS088_RS05170	COG1363	Peptidase, m42
OS088_RS05175	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
OS088_RS05180	COG0512	Glutamine amidotransferase of anthranilate synthase
OS088_RS05220	COG0561	phosphatase activity
OS088_RS05265	COG0704	Plays a role in the regulation of phosphate uptake
OS088_RS05275	COG0581	inorganic phosphate transmembrane transporter activity
OS088_RS05280	COG0573	inorganic phosphate transmembrane transporter activity
OS088_RS05295	COG0488	(ABC) transporter
OS088_RS05300	COG0527	aspartate kinase activity
OS088_RS05305	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
OS088_RS05375	COG4548	von Willebrand factor, type A
OS088_RS05380	COG0714	Associated with various cellular activities
OS088_RS05425	COG0671	phosphoesterase, PA-phosphatase related
OS088_RS05500	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
OS088_RS05520	COG0531	amino acid
OS088_RS05535	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OS088_RS05540	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
OS088_RS05555	COG0116	Belongs to the methyltransferase superfamily
OS088_RS05585	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
OS088_RS05585	COG4499	WXG100 protein secretion system (Wss), protein YukC
OS088_RS05595	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
OS088_RS05600	COG3935	DnaD domain protein
OS088_RS05625	COG0438	transferase activity, transferring glycosyl groups
OS088_RS05630	COG1694	Mazg nucleotide pyrophosphohydrolase
OS088_RS05635	COG2738	Putative neutral zinc metallopeptidase
OS088_RS05640	COG4347	Protein of unknown function (DUF1405)
OS088_RS05680	COG0142	geranyltranstransferase activity
OS088_RS05735	COG0492	ferredoxin-NADP+ reductase activity
OS088_RS05750	COG0514	ATP-dependent DNA helicase (RecQ)
OS088_RS05760	COG1141	Ferredoxin
OS088_RS05775	COG1448	Aminotransferase
OS088_RS05795	COG0066	3-isopropylmalate dehydratase activity
OS088_RS05800	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
OS088_RS05825	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
OS088_RS05835	COG0583	DNA-binding transcription factor activity
OS088_RS05900	COG5002	protein histidine kinase activity
OS088_RS05905	COG0745	RESPONSE REGULATOR receiver
OS088_RS05910	COG1187	pseudouridine synthase activity
OS088_RS05935	COG0735	belongs to the Fur family
OS088_RS05940	COG0494	nUDIX hydrolase
OS088_RS05945	COG0667	Aldo Keto reductase
OS088_RS05955	COG4221	oxidoreductase activity
OS088_RS05970	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
OS088_RS05980	COG0366	Alpha amylase catalytic
OS088_RS05985	COG1609	Transcriptional regulator
OS088_RS06015	COG1129	ABC transporter
OS088_RS06030	COG2195	Cleaves the N-terminal amino acid of tripeptides
OS088_RS06040	COG4129	membrane
OS088_RS06050	COG0508	dehydrogenase complex catalyzes the overall conversion of
OS088_RS06055	COG0022	dehydrogenase e1 component
OS088_RS06060	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
OS088_RS06065	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
OS088_RS06070	COG0497	DNA recombination
OS088_RS06100	COG1302	Protein conserved in bacteria
OS088_RS06105	COG0439	Biotin carboxylase
OS088_RS06110	COG0511	ligase activity, forming carbon-carbon bonds
OS088_RS06120	COG0006	proline dipeptidase activity
OS088_RS06135	COG0095	Lipoate-protein ligase
OS088_RS06140	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
OS088_RS06185	COG4537	Required for transformation and DNA binding
OS088_RS06190	COG1459	type II secretion system
OS088_RS06195	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
OS088_RS06200	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OS088_RS06205	COG0011	TIGRFAM Protein of
OS088_RS06210	COG1940	carbohydrate kinase activity
OS088_RS06215	COG4483	Protein conserved in bacteria
OS088_RS06225	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
OS088_RS06235	COG0768	penicillin binding
OS088_RS06250	COG1108	ABC-type Mn2 Zn2 transport systems permease components
OS088_RS06255	COG1121	(ABC) transporter
OS088_RS06265	COG0513	Belongs to the DEAD box helicase family
OS088_RS06275	COG2384	SAM-dependent methyltransferase
OS088_RS06295	COG0517	IMP dehydrogenase activity
OS088_RS06320	COG0295	cytidine deaminase activity
OS088_RS06335	COG1702	phosphate starvation-inducible protein PhoH
OS088_RS06350	COG1030	water channel activity
OS088_RS06360	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
OS088_RS06365	COG1385	rRNA (uridine-N3-)-methyltransferase activity
OS088_RS06395	COG0635	Involved in the biosynthesis of porphyrin-containing compound
OS088_RS06410	COG1466	dna polymerase III delta subunit
OS088_RS06415	COG0658	competence protein
OS088_RS06415	COG2333	competence protein COMEC
OS088_RS06420	COG2131	deaminase
OS088_RS06430	COG2226	methyltransferase
OS088_RS06435	COG0799	negative regulation of ribosome biogenesis
OS088_RS06440	COG1713	HD superfamily hydrolase involved in NAD metabolism
OS088_RS06450	COG1534	Rna-binding protein
OS088_RS06460	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
OS088_RS06465	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
OS088_RS06485	COG3177	Filamentation induced by cAMP protein fic
OS088_RS06490	COG1914	H( )-stimulated, divalent metal cation uptake system
OS088_RS06500	COG0439	Biotin carboxylase
OS088_RS06505	COG0511	ligase activity, forming carbon-carbon bonds
OS088_RS06510	COG1984	allophanate hydrolase subunit 2
OS088_RS06515	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
OS088_RS06530	COG0826	peptidase U32
OS088_RS06535	COG0826	peptidase U32
OS088_RS06565	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
OS088_RS06580	COG1104	cysteine desulfurase activity
OS088_RS06585	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OS088_RS06595	COG3237	CsbD-like
OS088_RS06600	COG1959	2 iron, 2 sulfur cluster binding
OS088_RS06605	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
OS088_RS06610	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
OS088_RS06655	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
OS088_RS06655	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
OS088_RS06660	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OS088_RS06660	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
OS088_RS06665	COG1862	Preprotein translocase
OS088_RS06705	COG2868	ribosomal protein
OS088_RS06750	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
OS088_RS06790	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
OS088_RS06795	COG0285	dihydrofolate synthase activity
OS088_RS06805	COG2818	Glycosylase
OS088_RS06840	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
OS088_RS06875	COG4112	unkown
OS088_RS06895	COG0833	amino acid
OS088_RS06910	COG1484	DNA-dependent DNA replication
OS088_RS06940	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OS088_RS06940	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
OS088_RS06950	COG5002	protein histidine kinase activity
OS088_RS06955	COG0745	RESPONSE REGULATOR receiver
OS088_RS06965	COG0372	Belongs to the citrate synthase family
OS088_RS06970	COG1113	amino acid transport
OS088_RS06995	COG0281	malic enzyme
OS088_RS07005	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
OS088_RS07010	COG4109	DRTGG domain
OS088_RS07050	COG0827	DNA restriction-modification system
OS088_RS07060	COG0730	response to heat
OS088_RS07070	COG1104	cysteine desulfurase activity
OS088_RS07085	COG1956	GAF domain-containing protein
OS088_RS07095	COG0584	glycerophosphoryl diester phosphodiesterase
OS088_RS07100	COG1764	response to oxidative stress
OS088_RS07105	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
OS088_RS07110	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
OS088_RS07130	COG1263	PTS System
OS088_RS07130	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OS088_RS07135	COG0204	Acyl-transferase
OS088_RS07140	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
OS088_RS07160	COG5386	Cell surface protein
OS088_RS07170	COG2759	Belongs to the formate--tetrahydrofolate ligase family
OS088_RS07175	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OS088_RS07180	COG0454	-acetyltransferase
OS088_RS07205	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
OS088_RS07205	COG1605	Chorismate mutase
OS088_RS07230	COG1674	ftsk spoiiie
OS088_RS07235	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
OS088_RS07245	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
OS088_RS07250	COG1363	Peptidase, m42
OS088_RS07260	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
OS088_RS07275	COG0510	thiamine kinase activity
OS088_RS07295	COG1187	pseudouridine synthase activity
OS088_RS07300	COG2244	polysaccharide biosynthetic process
OS088_RS07305	COG2081	HI0933 family
OS088_RS07325	COG2814	Major facilitator Superfamily
OS088_RS07330	COG1242	4 iron, 4 sulfur cluster binding
OS088_RS07335	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
OS088_RS07345	COG2267	carboxylic ester hydrolase activity
OS088_RS07375	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OS088_RS07375	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
OS088_RS07410	COG3266	domain, Protein
OS088_RS07410	COG4193	domain, Protein
OS088_RS07410	COG5632	N-Acetylmuramoyl-L-alanine amidase
OS088_RS07445	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
OS088_RS07470	COG0656	L-ascorbic acid biosynthetic process
OS088_RS07490	COG1506	peptidase
OS088_RS07495	COG2816	NAD+ diphosphatase activity
OS088_RS07610	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
OS088_RS07640	COG1131	(ABC) transporter
OS088_RS07645	COG0537	adenosine 5'-monophosphoramidase activity
OS088_RS07675	COG0420	3'-5' exonuclease activity
OS088_RS07700	COG2197	response regulator
OS088_RS07705	COG2203	Gaf domain
OS088_RS07705	COG4585	Histidine kinase
OS088_RS07710	COG0564	pseudouridine synthase activity
OS088_RS07750	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
OS088_RS07755	COG1126	abc transporter atp-binding protein
OS088_RS07760	COG0765	amino acid transport
OS088_RS07930	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
OS088_RS07935	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
OS088_RS07945	COG4129	membrane
OS088_RS07960	COG1194	a g-specific adenine glycosylase
OS088_RS07965	COG1988	membrane-bound metal-dependent
OS088_RS07975	COG1134	teichoic acid transport
OS088_RS07975	COG1388	LysM domain
OS088_RS08005	COG0535	radical SAM domain protein
OS088_RS08010	COG1607	acyl-coa hydrolase
OS088_RS08015	COG2309	aminopeptidase activity
OS088_RS08035	COG1295	ribonuclease BN
OS088_RS08150	COG1733	regulation of RNA biosynthetic process
OS088_RS08160	COG4851	CamS sex pheromone cAM373 precursor
OS088_RS08180	COG4496	protein, YerC YecD
OS088_RS08215	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
OS088_RS08225	COG0077	Prephenate dehydratase
OS088_RS08235	COG0471	metal ion transport
OS088_RS08245	COG1335	isochorismatase
OS088_RS08260	COG1012	belongs to the aldehyde dehydrogenase family
OS088_RS08275	COG3682	Transcriptional regulator
OS088_RS08375	COG1131	(ABC) transporter
OS088_RS08390	COG1725	Transcriptional regulator
OS088_RS08445	COG5632	N-Acetylmuramoyl-L-alanine amidase
OS088_RS08445	COG1388	LysM domain
OS088_RS08495	COG0739	heme binding
OS088_RS08550	COG4695	Portal protein
OS088_RS08780	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
OS088_RS08845	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
OS088_RS08850	COG1621	beta-fructofuranosidase activity
OS088_RS08855	COG1609	Transcriptional regulator
OS088_RS08860	COG0004	ammonium transporteR
OS088_RS08865	COG0425	Belongs to the sulfur carrier protein TusA family
OS088_RS08880	COG0488	(ABC) transporter
OS088_RS08895	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
OS088_RS08905	COG0456	acetyltransferase
OS088_RS08910	COG1214	PFAM Peptidase M22, glycoprotease
OS088_RS08915	COG0802	atpase or kinase
OS088_RS08930	COG0028	Belongs to the TPP enzyme family
OS088_RS09010	COG2183	response to ionizing radiation
OS088_RS09015	COG1191	sigma factor activity
OS088_RS09025	COG1366	Belongs to the anti-sigma-factor antagonist family
OS088_RS09030	COG2208	phosphoserine phosphatase activity
OS088_RS09060	COG3428	Bacterial PH domain
OS088_RS09090	COG2205	protein histidine kinase activity
OS088_RS09095	COG0745	RESPONSE REGULATOR receiver
OS088_RS09105	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
OS088_RS09115	COG0772	Belongs to the SEDS family
OS088_RS09130	COG1937	Protein conserved in bacteria
OS088_RS09140	COG1418	mRNA catabolic process
OS088_RS09180	COG0629	single-stranded DNA binding
OS088_RS09255	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
OS088_RS09280	COG0009	L-threonylcarbamoyladenylate synthase
OS088_RS09285	COG2890	protein-(glutamine-N5) methyltransferase activity
OS088_RS09305	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
OS088_RS09345	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OS088_RS09390	COG0813	purine-nucleoside phosphorylase activity
OS088_RS09395	COG0783	Belongs to the Dps family
OS088_RS09415	COG1482	cell wall glycoprotein biosynthetic process
OS088_RS09420	COG0702	epimerase
OS088_RS09425	COG0640	Transcriptional regulator
OS088_RS09465	COG0561	phosphatase activity
OS088_RS09470	COG1119	ATPase activity
OS088_RS09485	COG3711	transcriptional antiterminator
OS088_RS09515	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
OS088_RS09575	COG0489	protein tyrosine kinase activity
OS088_RS09580	COG2814	Major facilitator Superfamily
OS088_RS09595	COG1272	protein, Hemolysin III
OS088_RS09605	COG1988	membrane-bound metal-dependent
OS088_RS09615	COG3314	Sporulation integral membrane protein YlbJ
OS088_RS09620	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OS088_RS09625	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OS088_RS09630	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
OS088_RS09640	COG3457	Alanine racemase
OS088_RS09645	COG4264	IucA IucC family
OS088_RS09650	COG2814	Major facilitator Superfamily
OS088_RS09675	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OS088_RS09685	COG2130	NADP-dependent
OS088_RS09735	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
OS088_RS09750	COG2826	transposase and inactivated derivatives, IS30 family
OS088_RS09765	COG0656	L-ascorbic acid biosynthetic process
OS088_RS09770	COG0789	Transcriptional regulator
OS088_RS09780	COG5492	domain, Protein
OS088_RS09795	COG0438	transferase activity, transferring glycosyl groups
OS088_RS09810	COG3527	Alpha-acetolactate decarboxylase
OS088_RS09815	COG0028	Belongs to the TPP enzyme family
OS088_RS09830	COG0384	phenazine biosynthesis protein PhzF
OS088_RS09900	COG0201	protein transport
OS088_RS10015	COG2252	PERMEase
OS088_RS10060	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
OS088_RS10135	COG1763	Mo-molybdopterin cofactor biosynthetic process
OS088_RS10155	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
OS088_RS10160	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
OS088_RS10165	COG4149	molybdate abc transporter
OS088_RS10170	COG0725	ABC transporter, periplasmic molybdate-binding protein
OS088_RS10185	COG1268	BioY protein
OS088_RS10200	COG1960	acyl-CoA dehydrogenase activity
OS088_RS10205	COG4413	Urea transporter
OS088_RS10275	COG1757	Na H antiporter
OS088_RS10290	COG3942	CHAP domain
OS088_RS10355	COG1113	amino acid transport
OS088_RS10375	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
OS088_RS10380	COG0385	Bile acid
OS088_RS10390	COG1263	PTS System
OS088_RS10390	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OS088_RS10395	COG1737	Transcriptional regulator
OS088_RS10415	COG1028	Short-chain dehydrogenase reductase Sdr
OS088_RS10420	COG1473	amidohydrolase
OS088_RS10435	COG0583	DNA-binding transcription factor activity
OS088_RS10455	COG2258	MOSC domain
OS088_RS10475	COG1668	transmembrane transport
OS088_RS10480	COG4152	abc transporter atp-binding protein
OS088_RS10485	COG3152	Membrane
OS088_RS10495	COG0786	glutamate:sodium symporter activity
OS088_RS10505	COG0598	Magnesium transport protein CorA
OS088_RS10520	COG0657	acetylesterase activity
OS088_RS10535	COG1566	PFAM secretion protein HlyD family protein
OS088_RS10545	COG2814	Major facilitator Superfamily
OS088_RS10605	COG1131	(ABC) transporter
OS088_RS10620	COG1620	l-lactate permease
OS088_RS10640	COG0604	alcohol dehydrogenase
OS088_RS10675	COG1511	domain protein
OS088_RS10690	COG1263	PTS System
OS088_RS10690	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OS088_RS10705	COG3871	stress protein (general stress protein 26)
OS088_RS10745	COG0789	Transcriptional regulator
OS088_RS10765	COG2181	nitrate reductase activity
OS088_RS10770	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
OS088_RS10775	COG1140	nitrate reductase beta subunit
OS088_RS10780	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
OS088_RS10790	COG2146	nitrite reductase [NAD(P)H] activity
OS088_RS10795	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
OS088_RS10805	COG0454	-acetyltransferase
OS088_RS10810	COG2116	formate transmembrane transporter activity
OS088_RS10825	COG0803	Belongs to the bacterial solute-binding protein 9 family
OS088_RS10825	COG3443	Belongs to the bacterial solute-binding protein 9 family
OS088_RS10865	COG1126	abc transporter atp-binding protein
OS088_RS10870	COG0765	amino acid transport
OS088_RS10875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
OS088_RS10895	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
OS088_RS10935	COG0156	8-amino-7-oxononanoate synthase activity
OS088_RS10945	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
OS088_RS10950	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
OS088_RS10970	COG1929	Belongs to the glycerate kinase type-1 family
OS088_RS10980	COG2814	Major facilitator Superfamily
OS088_RS11000	COG1113	amino acid transport
OS088_RS11010	COG0531	amino acid
OS088_RS11025	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OS088_RS11035	COG1174	glycine betaine transport
OS088_RS11045	COG1174	glycine betaine transport
OS088_RS11065	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
OS088_RS11070	COG0531	amino acid
OS088_RS11075	COG2272	Belongs to the type-B carboxylesterase lipase family
OS088_RS11080	COG2814	Major facilitator Superfamily
OS088_RS11085	COG0390	transport system, permease component
OS088_RS11090	COG4619	ABC transporter
OS088_RS11095	COG1363	Peptidase, m42
OS088_RS11110	COG4808	Protein conserved in bacteria
OS088_RS11115	COG0069	glutamate synthase activity
OS088_RS11130	COG1124	(ABC) transporter
OS088_RS11140	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OS088_RS11145	COG0601	transmembrane transport
OS088_RS11180	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
OS088_RS11185	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
OS088_RS11215	COG2826	transposase and inactivated derivatives, IS30 family
OS088_RS11270	COG0494	nUDIX hydrolase
OS088_RS11335	COG1846	Transcriptional regulator
OS088_RS11370	COG1070	Carbohydrate kinase
OS088_RS11375	COG1802	Transcriptional regulator
OS088_RS11380	COG0789	Transcriptional regulator
OS088_RS11385	COG2357	RelA SpoT domain protein
OS088_RS11390	COG4876	unkown
OS088_RS11400	COG2271	Major facilitator Superfamily
OS088_RS11405	COG0586	Pfam SNARE associated Golgi protein
OS088_RS11415	COG1131	(ABC) transporter
OS088_RS11430	COG3949	Membrane
OS088_RS11435	COG0400	carboxylic ester hydrolase activity
OS088_RS11440	COG0346	lactoylglutathione lyase activity
OS088_RS11445	COG1846	Transcriptional regulator
OS088_RS11455	COG2514	catechol 2,3-dioxygenase activity
OS088_RS11475	COG0561	phosphatase activity
OS088_RS11480	COG1131	(ABC) transporter
OS088_RS11490	COG3764	Sortase (surface protein transpeptidase)
OS088_RS11510	COG1760	l-serine dehydratase
OS088_RS11515	COG1760	l-serine dehydratase
OS088_RS11530	COG0697	spore germination
OS088_RS11535	COG0657	acetylesterase activity
OS088_RS11560	COG0028	Belongs to the TPP enzyme family
OS088_RS11575	COG0583	DNA-binding transcription factor activity
OS088_RS11585	COG3942	CHAP domain
OS088_RS11595	COG3425	synthase
OS088_RS11625	COG2409	Drug exporters of the RND superfamily
OS088_RS11670	COG0436	Aminotransferase
OS088_RS11700	COG2826	transposase and inactivated derivatives, IS30 family
OS088_RS11710	COG2755	lipolytic protein G-D-S-L family
OS088_RS11710	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
OS088_RS11715	COG0456	acetyltransferase
OS088_RS11790	COG0596	Alpha beta hydrolase
OS088_RS11835	COG3001	Fructosamine kinase
OS088_RS11840	COG0167	dihydroorotate dehydrogenase activity
OS088_RS11885	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
OS088_RS11890	COG3527	Alpha-acetolactate decarboxylase
OS088_RS11900	COG0531	amino acid
OS088_RS11930	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
OS088_RS11950	COG1012	belongs to the aldehyde dehydrogenase family
OS088_RS11960	COG1510	regulation of RNA biosynthetic process
OS088_RS11965	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
OS088_RS11990	COG2851	Citrate transporter
OS088_RS12005	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
OS088_RS12015	COG0386	Belongs to the glutathione peroxidase family
OS088_RS12035	COG1136	(ABC) transporter
OS088_RS12040	COG2205	protein histidine kinase activity
OS088_RS12045	COG0745	RESPONSE REGULATOR receiver
OS088_RS12055	COG1785	Belongs to the alkaline phosphatase family
OS088_RS12065	COG1846	Transcriptional regulator
OS088_RS12110	COG1438	arginine binding
OS088_RS12130	COG3711	transcriptional antiterminator
OS088_RS12130	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OS088_RS12135	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OS088_RS12135	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OS088_RS12135	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
OS088_RS12140	COG1482	cell wall glycoprotein biosynthetic process
OS088_RS12150	COG1705	Flagellar rod assembly protein muramidase FlgJ
OS088_RS12150	COG3942	CHAP domain
OS088_RS12155	COG1535	isochorismatase
OS088_RS12155	COG3433	isochorismatase activity
OS088_RS12170	COG0438	transferase activity, transferring glycosyl groups
OS088_RS12185	COG1073	alpha beta
OS088_RS12205	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OS088_RS12225	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
OS088_RS12260	COG3344	reverse transcriptase
OS088_RS12320	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
OS088_RS12380	COG0471	metal ion transport
OS088_RS12385	COG2962	Rard protein
OS088_RS12395	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
OS088_RS12410	COG1136	(ABC) transporter
OS088_RS12415	COG0577	efflux transmembrane transporter activity
OS088_RS12450	COG1278	Cold shock
OS088_RS12470	COG1475	DNA binding
OS088_RS12510	COG2501	S4 domain
OS088_RS12530	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
OS088_RS12555	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
OS088_RS12565	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
OS088_RS12575	COG0305	Participates in initiation and elongation during chromosome replication
OS088_RS12605	COG4863	YycH protein
OS088_RS12615	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
OS088_RS12620	COG0737	Belongs to the 5'-nucleotidase family
OS088_RS12675	COG3425	synthase
OS088_RS12680	COG0584	glycerophosphoryl diester phosphodiesterase
OS088_RS12685	COG2030	dehydratase
OS088_RS12710	COG1846	Transcriptional regulator
OS088_RS12710	COG1940	carbohydrate kinase activity
OS088_RS12720	COG2210	Belongs to the sulfur carrier protein TusA family
OS088_RS12725	COG1937	Protein conserved in bacteria
OS088_RS12765	COG2003	Belongs to the UPF0758 family
OS088_RS12905	COG0823	Involved in the tonB-independent uptake of proteins
OS088_RS12935	COG1473	amidohydrolase
OS088_RS12950	COG1283	sodium-dependent phosphate transmembrane transporter activity
OS088_RS12955	COG4716	Myosin-crossreactive antigen
OS088_RS12965	COG1620	l-lactate permease
OS088_RS12980	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OS088_RS12985	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
OS088_RS12990	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
OS088_RS13000	COG2423	ornithine cyclodeaminase activity
OS088_RS13005	COG4264	IucA IucC family
OS088_RS13010	COG2814	Major facilitator Superfamily
OS088_RS13015	COG4264	IucA IucC family
OS088_RS13020	COG4264	IucA IucC family
OS088_RS13030	COG0019	diaminopimelate decarboxylase activity
OS088_RS13035	COG1475	DNA binding
OS088_RS13060	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
OS088_RS13065	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OS088_RS13070	COG0438	transferase activity, transferring glycosyl groups
OS088_RS13095	COG0813	purine-nucleoside phosphorylase activity
OS088_RS13100	COG2814	Major facilitator Superfamily
OS088_RS13120	COG3639	organic phosphonate transmembrane transporter activity
OS088_RS13140	COG0737	Belongs to the 5'-nucleotidase family
OS088_RS13150	COG1454	alcohol dehydrogenase
OS088_RS13150	COG1012	belongs to the aldehyde dehydrogenase family
OS088_RS13175	COG1086	Polysaccharide biosynthesis protein
OS088_RS13185	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
OS088_RS13215	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
OS088_RS13225	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
OS088_RS13230	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
OS088_RS13240	COG2832	Protein of unknown function (DUF454)
OS088_RS13275	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
OS088_RS13330	COG1114	Component of the transport system for branched-chain amino acids
OS088_RS13335	COG1335	isochorismatase
OS088_RS13340	COG3961	Belongs to the TPP enzyme family
OS088_RS13370	COG1737	Transcriptional regulator
OS088_RS13405	COG0601	transmembrane transport
OS088_RS13410	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
OS088_RS13420	COG0405	Gamma-glutamyltransferase
OS088_RS13440	COG3842	ATPase activity
OS088_RS13450	COG1175	transmembrane transport
OS088_RS13455	COG3833	ABC-type maltose transport systems, permease component
OS088_RS13460	COG0673	inositol 2-dehydrogenase activity
OS088_RS13465	COG0673	inositol 2-dehydrogenase activity
OS088_RS13475	COG1755	Isoprenylcysteine carboxyl methyltransferase
OS088_RS13535	COG0183	Belongs to the thiolase family
OS088_RS13545	COG1960	acyl-CoA dehydrogenase activity
OS088_RS13550	COG0318	PFAM AMP-dependent synthetase and ligase
OS088_RS13570	COG0747	negative chemotaxis
OS088_RS13575	COG3189	MarR family transcriptional regulator
OS088_RS13600	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OS088_RS13600	COG2190	(PTS) system
OS088_RS13600	COG1263	PTS System
OS088_RS13605	COG1957	nucleoside hydrolase
OS088_RS13625	COG3414	Phosphotransferase system galactitol-specific IIB component
OS088_RS13630	COG3775	system Galactitol-specific IIC component
OS088_RS13635	COG1063	alcohol dehydrogenase
OS088_RS13645	COG1063	alcohol dehydrogenase
OS088_RS13655	COG1063	alcohol dehydrogenase
OS088_RS13660	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
OS088_RS13665	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
OS088_RS13675	COG1063	alcohol dehydrogenase
OS088_RS13680	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
OS088_RS13730	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
OS088_RS13735	COG1263	PTS System
OS088_RS13735	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
OS088_RS13735	COG2190	(PTS) system
OS088_RS13740	COG2723	6-phospho-beta-galactosidase activity
OS088_RS13745	COG2226	methyltransferase
OS088_RS13800	COG1131	(ABC) transporter
OS088_RS13820	COG1388	LysM domain
OS088_RS13820	COG3942	CHAP domain
OS088_RS13960	COG1114	Component of the transport system for branched-chain amino acids
OS088_RS13965	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
OS088_RS13970	COG0577	efflux transmembrane transporter activity
OS088_RS14000	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
OS088_RS14005	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
OS088_RS14030	COG3314	Sporulation integral membrane protein YlbJ
OS088_RS14035	COG2826	transposase and inactivated derivatives, IS30 family
OS088_RS14060	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OS088_RS14090	COG3037	sugar-specific permease SgaT UlaA
OS088_RS14100	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
OS088_RS14105	COG3711	transcriptional antiterminator
OS088_RS14125	COG2271	Major facilitator Superfamily
OS088_RS14130	COG0346	lactoylglutathione lyase activity
OS088_RS14135	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
OS088_RS14140	COG0431	NADPH-dependent FMN reductase
OS088_RS14155	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
OS088_RS14160	COG2822	iron ion transport
OS088_RS14170	COG0672	)-iron permease
OS088_RS14175	COG0805	protein transport
OS088_RS14180	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
OS088_RS14190	COG1476	TRANSCRIPTIONal
OS088_RS14200	COG1131	(ABC) transporter
OS088_RS14230	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
OS088_RS14230	COG0646	methionine synthase
OS088_RS14235	COG0626	cystathionine gamma-synthase activity
OS088_RS14240	COG0626	cystathionine gamma-synthase activity
OS088_RS14245	COG1475	DNA binding
OS088_RS14250	COG0668	transmembrane transport
OS088_RS14255	COG4481	Protein conserved in bacteria
OS088_RS14260	COG0012	GTP binding
OS088_RS14360	COG1823	symporter activity
OS088_RS14385	COG2233	PERMEase
OS088_RS14435	COG3759	membrane