MS7_RS00115 SM00382 ATPases associated with a variety of cellular activities MS7_RS00115 SM00760 Bacterial dnaA protein helix-turn-helix domain MS7_RS00120 SM00480 DNA polymerase III beta subunit MS7_RS00135 SM00387 Histidine kinase-like ATPases MS7_RS00135 SM00433 TopoisomeraseII MS7_RS00140 SM00434 DNA Topoisomerase IV MS7_RS00180 SM00267 diguanylate cyclase MS7_RS00195 SM00788 Adenylosuccinate synthetase MS7_RS00210 SM00448 cheY-homologous receiver domain MS7_RS00210 SM00862 Transcriptional regulatory protein, C terminal MS7_RS00215 SM00091 PAS domain MS7_RS00215 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MS7_RS00215 SM00387 Histidine kinase-like ATPases MS7_RS00215 SM00388 His Kinase A (phosphoacceptor) domain MS7_RS00230 SM00849 Metallo-beta-lactamase superfamily MS7_RS00325 SM00857 Resolvase, N terminal domain MS7_RS00350 SM00091 PAS domain MS7_RS00350 SM00382 ATPases associated with a variety of cellular activities MS7_RS00370 SM00345 helix_turn_helix gluconate operon transcriptional repressor MS7_RS00380 SM00448 cheY-homologous receiver domain MS7_RS00380 SM00862 Transcriptional regulatory protein, C terminal MS7_RS00390 SM00387 Histidine kinase-like ATPases MS7_RS00395 SM00382 ATPases associated with a variety of cellular activities MS7_RS00460 SM00857 Resolvase, N terminal domain MS7_RS00465 SM00857 Resolvase, N terminal domain MS7_RS00550 SM00148 Phospholipase C, catalytic domain (part); domain X MS7_RS00585 SM00342 helix_turn_helix, arabinose operon control protein MS7_RS00620 SM00257 Lysin motif MS7_RS00625 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS00685 SM00470 ParB-like nuclease domain MS7_RS00700 SM00822 MS7_RS00700 MS7_RS00745 SM00345 helix_turn_helix gluconate operon transcriptional repressor MS7_RS00765 SM01133 MS7_RS00765 MS7_RS00785 SM00382 ATPases associated with a variety of cellular activities MS7_RS00790 SM00062 Bacterial periplasmic substrate-binding proteins MS7_RS00905 SM00984 UDP binding domain MS7_RS00950 SM00382 ATPases associated with a variety of cellular activities MS7_RS01010 SM00859 Semialdehyde dehydrogenase, NAD binding domain MS7_RS01070 SM00487 DEAD-like helicases superfamily MS7_RS01090 SM00382 ATPases associated with a variety of cellular activities MS7_RS01130 SM00382 ATPases associated with a variety of cellular activities MS7_RS01175 SM00342 helix_turn_helix, arabinose operon control protein MS7_RS01175 SM00448 cheY-homologous receiver domain MS7_RS01250 SM00882 Coenzyme A transferase MS7_RS01335 SM00829 Enoylreductase MS7_RS01345 SM00829 Enoylreductase MS7_RS01395 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. MS7_RS01395 SM00387 Histidine kinase-like ATPases MS7_RS01400 SM00448 cheY-homologous receiver domain MS7_RS01400 SM00850 LytTr DNA-binding domain MS7_RS01415 SM00345 helix_turn_helix gluconate operon transcriptional repressor MS7_RS01415 SM00866 MS7_RS01415 MS7_RS01455 SM00354 helix_turn _helix lactose operon repressor MS7_RS01490 SM00382 ATPases associated with a variety of cellular activities MS7_RS01655 SM00382 ATPases associated with a variety of cellular activities MS7_RS01685 SM01130 MS7_RS01685 MS7_RS01740 SM00506 Appr-1"-p processing enzyme MS7_RS01780 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS01860 SM00530 Helix-turn-helix XRE-family like proteins MS7_RS01870 SM00382 ATPases associated with a variety of cellular activities MS7_RS01920 SM00470 ParB-like nuclease domain MS7_RS02000 SM00855 Phosphoglycerate mutase family MS7_RS02070 SM00116 Domain in cystathionine beta-synthase and other proteins. MS7_RS02070 SM01240 MS7_RS02070 MS7_RS02310 SM00833 Cobalamin synthesis protein cobW C-terminal domain MS7_RS02340 SM00014 Acid phosphatase homologues MS7_RS02370 SM00382 ATPases associated with a variety of cellular activities MS7_RS02370 SM00930 MS7_RS02370 MS7_RS02385 SM00257 Lysin motif MS7_RS02440 SM00642 Alpha-amylase domain MS7_RS02445 SM00345 helix_turn_helix gluconate operon transcriptional repressor MS7_RS02445 SM00866 MS7_RS02445 MS7_RS02460 SM00382 ATPases associated with a variety of cellular activities MS7_RS02470 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MS7_RS02470 SM00493 MS7_RS02470 MS7_RS02535 SM00465 GIY-YIG type nucleases (URI domain) MS7_RS02560 SM00493 MS7_RS02560 MS7_RS02565 SM00650 Ribosomal RNA adenine dimethylases MS7_RS02605 SM01400 MS7_RS02605 MS7_RS02625 SM00487 DEAD-like helicases superfamily MS7_RS02625 SM00490 helicase superfamily c-terminal domain MS7_RS02625 SM00982 MS7_RS02625 MS7_RS02625 SM01058 CarD-like/TRCF domain MS7_RS02640 SM00363 S4 RNA-binding domain MS7_RS02650 SM00316 Ribosomal protein S1-like RNA-binding domain MS7_RS02655 SM00977 TilS substrate C-terminal domain MS7_RS02665 SM00382 ATPases associated with a variety of cellular activities MS7_RS02685 SM00905 Dihydroneopterin aldolase MS7_RS02765 SM00345 helix_turn_helix gluconate operon transcriptional repressor MS7_RS02800 SM00382 ATPases associated with a variety of cellular activities MS7_RS02800 SM01086 C-terminal, D2-small domain, of ClpB protein MS7_RS02810 SM00382 ATPases associated with a variety of cellular activities MS7_RS02815 SM00670 Large family of predicted nucleotide-binding domains MS7_RS02830 SM00840 MS7_RS02830 MS7_RS02840 SM00967 RNA 2'-O ribose methyltransferase substrate binding MS7_RS02860 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. MS7_RS02860 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. MS7_RS02865 SM00649 Ribosomal protein L11/L12 MS7_RS02895 SM00663 RNA polymerase I subunit A N-terminus MS7_RS02915 SM00838 Elongation factor G C-terminus MS7_RS02915 SM00889 Elongation factor G, domain IV MS7_RS03030 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family MS7_RS03080 SM00986 Uracil DNA glycosylase superfamily MS7_RS03080 SM00987 UreE urease accessory protein, C-terminal domain MS7_RS03150 SM00857 Resolvase, N terminal domain MS7_RS03160 SM00530 Helix-turn-helix XRE-family like proteins MS7_RS03165 SM00530 Helix-turn-helix XRE-family like proteins MS7_RS03170 SM01040 BRO family, N-terminal domain MS7_RS03435 SM00047 Lysozyme subfamily 2 MS7_RS03455 SM00287 Bacterial SH3 domain homologues MS7_RS03455 SM00644 MS7_RS03455 MS7_RS03530 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MS7_RS03540 SM00829 Enoylreductase MS7_RS03555 SM00836 DALR anticodon binding domain MS7_RS03555 SM01016 Arginyl tRNA synthetase N terminal dom MS7_RS03560 SM00478 endonuclease III MS7_RS03675 SM00382 ATPases associated with a variety of cellular activities MS7_RS03680 SM00529 Helix-turn-helix diphteria tox regulatory element MS7_RS03680 SM00899 MS7_RS03680 MS7_RS03695 SM00382 ATPases associated with a variety of cellular activities MS7_RS03725 SM00382 ATPases associated with a variety of cellular activities MS7_RS03745 SM00382 ATPases associated with a variety of cellular activities MS7_RS03765 SM01120 MS7_RS03765 MS7_RS03810 SM00448 cheY-homologous receiver domain MS7_RS03810 SM00862 Transcriptional regulatory protein, C terminal MS7_RS03815 SM00387 Histidine kinase-like ATPases MS7_RS03820 SM00382 ATPases associated with a variety of cellular activities MS7_RS03840 SM00257 Lysin motif MS7_RS03850 SM00342 helix_turn_helix, arabinose operon control protein MS7_RS03945 SM00382 ATPases associated with a variety of cellular activities MS7_RS03950 SM00382 ATPases associated with a variety of cellular activities MS7_RS03955 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS03960 SM00833 Cobalamin synthesis protein cobW C-terminal domain MS7_RS04015 SM00420 helix_turn_helix, Deoxyribose operon repressor MS7_RS04015 SM01134 MS7_RS04015 MS7_RS04040 SM01091 Transporter associated domain MS7_RS04055 SM00387 Histidine kinase-like ATPases MS7_RS04055 SM00388 His Kinase A (phosphoacceptor) domain MS7_RS04060 SM00448 cheY-homologous receiver domain MS7_RS04060 SM00862 Transcriptional regulatory protein, C terminal MS7_RS04115 SM00796 Allophanate hydrolase subunit 1 MS7_RS04120 SM00797 Allophanate hydrolase subunit 2 MS7_RS04135 SM00382 ATPases associated with a variety of cellular activities MS7_RS04140 SM00341 Helicase and RNase D C-terminal MS7_RS04140 SM00487 DEAD-like helicases superfamily MS7_RS04140 SM00490 helicase superfamily c-terminal domain MS7_RS04140 SM00956 MS7_RS04140 MS7_RS04145 SM00382 ATPases associated with a variety of cellular activities MS7_RS04165 SM00046 Diacylglycerol kinase catalytic domain (presumed) MS7_RS04220 SM00382 ATPases associated with a variety of cellular activities MS7_RS04275 SM00267 diguanylate cyclase MS7_RS04295 SM00487 DEAD-like helicases superfamily MS7_RS04295 SM00490 helicase superfamily c-terminal domain MS7_RS04310 SM00957 SecA DEAD-like domain MS7_RS04310 SM00958 SecA preprotein cross-linking domain MS7_RS04320 SM00937 MS7_RS04320 MS7_RS04330 SM00257 Lysin motif MS7_RS04345 SM00487 DEAD-like helicases superfamily MS7_RS04345 SM00490 helicase superfamily c-terminal domain MS7_RS04370 SM00028 Tetratricopeptide repeats MS7_RS04425 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MS7_RS04445 SM01192 MS7_RS04445 MS7_RS04445 SM01193 MS7_RS04445 MS7_RS04465 SM00316 Ribosomal protein S1-like RNA-binding domain MS7_RS04465 SM00357 Cold shock protein domain MS7_RS04465 SM00955 MS7_RS04465 MS7_RS04530 SM00318 Staphylococcal nuclease homologues MS7_RS04535 SM00357 Cold shock protein domain MS7_RS04575 SM00855 Phosphoglycerate mutase family MS7_RS04630 SM00493 MS7_RS04630 MS7_RS04640 SM00382 ATPases associated with a variety of cellular activities MS7_RS04640 SM00930 MS7_RS04640 MS7_RS04665 SM00382 ATPases associated with a variety of cellular activities MS7_RS04730 SM00729 Elongator protein 3, MiaB family, Radical SAM MS7_RS04875 SM01298 MS7_RS04875 MS7_RS04885 SM00316 Ribosomal protein S1-like RNA-binding domain MS7_RS04900 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase MS7_RS04990 SM00382 ATPases associated with a variety of cellular activities MS7_RS04990 SM01086 C-terminal, D2-small domain, of ClpB protein MS7_RS05035 SM00825 Beta-ketoacyl synthase MS7_RS05055 SM00382 ATPases associated with a variety of cellular activities MS7_RS05060 SM00382 ATPases associated with a variety of cellular activities MS7_RS05075 SM00382 ATPases associated with a variety of cellular activities MS7_RS05080 SM00382 ATPases associated with a variety of cellular activities MS7_RS05130 SM01118 MS7_RS05130 MS7_RS05140 SM00954 Region found in RelA / SpoT proteins MS7_RS05155 SM00116 Domain in cystathionine beta-synthase and other proteins. MS7_RS05155 SM00924 MgtE intracellular N domain MS7_RS05220 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MS7_RS05250 SM00914 MS7_RS05250 MS7_RS05290 SM00382 ATPases associated with a variety of cellular activities MS7_RS05385 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS05395 SM00047 Lysozyme subfamily 2 MS7_RS05395 SM00644 MS7_RS05395 MS7_RS05455 SM01001 AIR carboxylase MS7_RS05475 SM01211 MS7_RS05475 MS7_RS05500 SM00798 AICARFT/IMPCHase bienzyme MS7_RS05500 SM00851 MGS-like domain MS7_RS05505 SM01209 MS7_RS05505 MS7_RS05505 SM01210 MS7_RS05505 MS7_RS05515 SM00382 ATPases associated with a variety of cellular activities MS7_RS05580 SM00849 Metallo-beta-lactamase superfamily MS7_RS05610 SM00861 Transketolase, pyrimidine binding domain MS7_RS05630 SM00530 Helix-turn-helix XRE-family like proteins MS7_RS05635 SM00382 ATPases associated with a variety of cellular activities MS7_RS05685 SM00838 Elongation factor G C-terminus MS7_RS05710 SM00878 Biotin carboxylase C-terminal domain MS7_RS05790 SM00725 NEAr Transporter domain MS7_RS05795 SM00725 NEAr Transporter domain MS7_RS05800 SM00725 NEAr Transporter domain MS7_RS05835 SM00967 RNA 2'-O ribose methyltransferase substrate binding MS7_RS05845 SM00873 B3/4 domain MS7_RS05845 SM00874 tRNA synthetase B5 domain MS7_RS05845 SM00896 Ferredoxin-fold anticodon binding domain MS7_RS05865 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MS7_RS05865 SM00481 DNA polymerase alpha chain like domain MS7_RS05865 SM00483 DNA polymerase X family MS7_RS05870 SM00463 Small MutS-related domain MS7_RS05870 SM00533 DNA-binding domain of DNA mismatch repair MUTS family MS7_RS05870 SM00534 ATPase domain of DNA mismatch repair MUTS family MS7_RS05885 SM00465 GIY-YIG type nucleases (URI domain) MS7_RS06090 SM00740 MS7_RS06090 MS7_RS06110 SM00842 Cell division protein FtsA MS7_RS06115 SM00864 Tubulin/FtsZ family, GTPase domain MS7_RS06115 SM00865 Tubulin/FtsZ family, C-terminal domain MS7_RS06140 SM00363 S4 RNA-binding domain MS7_RS06170 SM00363 S4 RNA-binding domain MS7_RS06195 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain MS7_RS06200 SM00851 MGS-like domain MS7_RS06200 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain MS7_RS06200 SM01209 MS7_RS06200 MS7_RS06205 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family MS7_RS06230 SM00072 Guanylate kinase homologues. MS7_RS06235 SM01409 MS7_RS06235 MS7_RS06245 SM00487 DEAD-like helicases superfamily MS7_RS06245 SM00490 helicase superfamily c-terminal domain MS7_RS06280 SM00331 Sigma factor PP2C-like phosphatases MS7_RS06280 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain MS7_RS06285 SM00220 Serine/Threonine protein kinases, catalytic domain MS7_RS06285 SM00740 MS7_RS06285 MS7_RS06300 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain MS7_RS06315 SM01120 MS7_RS06315 MS7_RS06315 SM01121 MS7_RS06315 MS7_RS06320 SM00487 DEAD-like helicases superfamily MS7_RS06320 SM00490 helicase superfamily c-terminal domain MS7_RS06335 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. MS7_RS06340 SM00822 MS7_RS06340 MS7_RS06355 SM00358 Double-stranded RNA binding motif MS7_RS06355 SM00535 Ribonuclease III family MS7_RS06360 SM00968 SMC proteins Flexible Hinge Domain MS7_RS06365 SM00382 ATPases associated with a variety of cellular activities MS7_RS06365 SM00962 SRP54-type protein, GTPase domain MS7_RS06365 SM00963 SRP54-type protein, helical bundle domain MS7_RS06375 SM00382 ATPases associated with a variety of cellular activities MS7_RS06375 SM00962 SRP54-type protein, GTPase domain MS7_RS06375 SM00963 SRP54-type protein, helical bundle domain MS7_RS06425 SM00881 CoA binding domain MS7_RS06430 SM00257 Lysin motif MS7_RS06445 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain MS7_RS06445 SM00437 Bacterial DNA topoisomerase I DNA-binding domain MS7_RS06445 SM00493 MS7_RS06445 MS7_RS06465 SM00382 ATPases associated with a variety of cellular activities MS7_RS06465 SM01086 C-terminal, D2-small domain, of ClpB protein MS7_RS06525 SM00479 MS7_RS06525 MS7_RS06525 SM00481 DNA polymerase alpha chain like domain MS7_RS06535 SM00316 Ribosomal protein S1-like RNA-binding domain MS7_RS06535 SM00322 K homology RNA-binding domain MS7_RS06565 SM00904 Riboflavin kinase MS7_RS06570 SM01387 MS7_RS06570 MS7_RS06575 SM00316 Ribosomal protein S1-like RNA-binding domain MS7_RS06575 SM00322 K homology RNA-binding domain MS7_RS06580 SM00849 Metallo-beta-lactamase superfamily MS7_RS06585 SM00382 ATPases associated with a variety of cellular activities MS7_RS06585 SM00843 MS7_RS06585 MS7_RS06590 SM00345 helix_turn_helix gluconate operon transcriptional repressor MS7_RS06590 SM00866 MS7_RS06590 MS7_RS06615 SM00530 Helix-turn-helix XRE-family like proteins MS7_RS06625 SM00852 Probable molybdopterin binding domain MS7_RS06630 SM00382 ATPases associated with a variety of cellular activities MS7_RS06635 SM00322 K homology RNA-binding domain MS7_RS06635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MS7_RS06665 SM00729 Elongator protein 3, MiaB family, Radical SAM MS7_RS06680 SM00533 DNA-binding domain of DNA mismatch repair MUTS family MS7_RS06680 SM00534 ATPase domain of DNA mismatch repair MUTS family MS7_RS06685 SM00853 MutL C terminal dimerisation domain MS7_RS06685 SM01340 MS7_RS06685 MS7_RS06740 SM00422 helix_turn_helix, mercury resistance MS7_RS06745 SM01230 MS7_RS06745 MS7_RS06830 SM00155 Phospholipase D. Active site motifs. MS7_RS06840 SM00318 Staphylococcal nuclease homologues MS7_RS06895 SM01060 MS7_RS06895 MS7_RS06910 SM01240 MS7_RS06910 MS7_RS06940 SM00861 Transketolase, pyrimidine binding domain MS7_RS06995 SM01207 MS7_RS06995 MS7_RS07000 SM00387 Histidine kinase-like ATPases MS7_RS07000 SM00433 TopoisomeraseII MS7_RS07005 SM00434 DNA Topoisomerase IV MS7_RS07020 SM01061 CAT RNA binding domain MS7_RS07130 SM00382 ATPases associated with a variety of cellular activities MS7_RS07135 SM00382 ATPases associated with a variety of cellular activities MS7_RS07170 SM00382 ATPases associated with a variety of cellular activities MS7_RS07205 SM00382 ATPases associated with a variety of cellular activities MS7_RS07215 SM00859 Semialdehyde dehydrogenase, NAD binding domain MS7_RS07220 SM01130 MS7_RS07220 MS7_RS07240 SM01005 Alanine racemase, C-terminal domain MS7_RS07255 SM00357 Cold shock protein domain MS7_RS07290 SM00327 von Willebrand factor (vWF) type A domain MS7_RS07315 SM00861 Transketolase, pyrimidine binding domain MS7_RS07320 SM00387 Histidine kinase-like ATPases MS7_RS07320 SM00388 His Kinase A (phosphoacceptor) domain MS7_RS07325 SM00448 cheY-homologous receiver domain MS7_RS07325 SM00862 Transcriptional regulatory protein, C terminal MS7_RS07340 SM00014 Acid phosphatase homologues MS7_RS07355 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MS7_RS07355 SM00245 tail specific protease MS7_RS07405 SM00567 E-Z type HEAT repeats MS7_RS07405 SM00932 Scaffold protein Nfu/NifU N terminal MS7_RS07410 SM00932 Scaffold protein Nfu/NifU N terminal MS7_RS07445 SM00844 GA module MS7_RS07465 SM01002 Alanine dehydrogenase/PNT, C-terminal domain MS7_RS07465 SM01003 Alanine dehydrogenase/PNT, N-terminal domain MS7_RS07470 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs MS7_RS07470 SM00475 5'-3' exonuclease MS7_RS07495 SM00981 MS7_RS07495 MS7_RS07535 SM00478 endonuclease III MS7_RS07535 SM00525 MS7_RS07535 MS7_RS07550 SM00479 MS7_RS07550 MS7_RS07550 SM00491 MS7_RS07550 MS7_RS07585 SM00914 MS7_RS07585 MS7_RS07590 SM00028 Tetratricopeptide repeats MS7_RS07615 SM00562 MS7_RS07615 MS7_RS07640 SM00411 bacterial (prokaryotic) histone like domain MS7_RS07655 SM00316 Ribosomal protein S1-like RNA-binding domain MS7_RS07670 SM00870 MS7_RS07670 MS7_RS07685 SM00257 Lysin motif MS7_RS07690 SM00487 DEAD-like helicases superfamily MS7_RS07690 SM00490 helicase superfamily c-terminal domain MS7_RS07750 SM00287 Bacterial SH3 domain homologues MS7_RS07750 SM00646 MS7_RS07750 MS7_RS07815 SM00635 Bacterial Ig-like domain 2 MS7_RS07870 SM00507 HNH nucleases MS7_RS07880 SM00487 DEAD-like helicases superfamily MS7_RS07885 SM00990 MS7_RS07885 MS7_RS07965 SM00482 DNA polymerase A domain MS7_RS08015 SM00530 Helix-turn-helix XRE-family like proteins MS7_RS08020 SM00530 Helix-turn-helix XRE-family like proteins MS7_RS08070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MS7_RS08070 SM00387 Histidine kinase-like ATPases MS7_RS08070 SM00388 His Kinase A (phosphoacceptor) domain MS7_RS08075 SM00448 cheY-homologous receiver domain MS7_RS08075 SM00862 Transcriptional regulatory protein, C terminal MS7_RS08080 SM00363 S4 RNA-binding domain MS7_RS08145 SM00342 helix_turn_helix, arabinose operon control protein MS7_RS08145 SM00871 Bacterial transcription activator, effector binding domain MS7_RS08150 SM00642 Alpha-amylase domain MS7_RS08155 SM00354 helix_turn _helix lactose operon repressor MS7_RS08170 SM01350 MS7_RS08170 MS7_RS08200 SM00861 Transketolase, pyrimidine binding domain MS7_RS08250 SM00878 Biotin carboxylase C-terminal domain MS7_RS08260 SM00841 Elongation factor P, C-terminal MS7_RS08260 SM01185 MS7_RS08260 MS7_RS08285 SM00450 Rhodanese Homology Domain MS7_RS08345 SM00849 Metallo-beta-lactamase superfamily MS7_RS08400 SM00382 ATPases associated with a variety of cellular activities MS7_RS08405 SM00518 AP endonuclease family 2 MS7_RS08410 SM00487 DEAD-like helicases superfamily MS7_RS08410 SM00490 helicase superfamily c-terminal domain MS7_RS08430 SM00400 zinc finger MS7_RS08430 SM00493 MS7_RS08430 MS7_RS08440 SM00116 Domain in cystathionine beta-synthase and other proteins. MS7_RS08500 SM00729 Elongator protein 3, MiaB family, Radical SAM MS7_RS08515 SM00271 DnaJ molecular chaperone homology domain MS7_RS08535 SM00729 Elongator protein 3, MiaB family, Radical SAM MS7_RS08545 SM00838 Elongation factor G C-terminus MS7_RS08560 SM00849 Metallo-beta-lactamase superfamily MS7_RS08570 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MS7_RS08585 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MS7_RS08595 SM01103 MS7_RS08595 MS7_RS08650 SM00878 Biotin carboxylase C-terminal domain MS7_RS08660 SM00797 Allophanate hydrolase subunit 2 MS7_RS08665 SM00796 Allophanate hydrolase subunit 1 MS7_RS08700 SM00732 Likely ribonuclease with RNase H fold. MS7_RS08710 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain MS7_RS08715 SM00382 ATPases associated with a variety of cellular activities MS7_RS08720 SM00028 Tetratricopeptide repeats MS7_RS08760 SM00382 ATPases associated with a variety of cellular activities MS7_RS08785 SM00287 Bacterial SH3 domain homologues MS7_RS08785 SM00646 MS7_RS08785 MS7_RS08795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MS7_RS08795 SM00954 Region found in RelA / SpoT proteins MS7_RS08815 SM01323 MS7_RS08815 MS7_RS08830 SM00382 ATPases associated with a variety of cellular activities MS7_RS08835 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MS7_RS08935 SM01004 Delta-aminolevulinic acid dehydratase MS7_RS08965 SM00382 ATPases associated with a variety of cellular activities MS7_RS08965 SM00994 ClpX C4-type zinc finger MS7_RS08965 SM01086 C-terminal, D2-small domain, of ClpB protein MS7_RS09015 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain MS7_RS09040 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain MS7_RS09050 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain MS7_RS09050 SM01232 MS7_RS09050 MS7_RS09055 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs MS7_RS09055 SM00474 3'-5' exonuclease MS7_RS09055 SM00475 5'-3' exonuclease MS7_RS09055 SM00482 DNA polymerase A domain MS7_RS09065 SM00387 Histidine kinase-like ATPases MS7_RS09065 SM00388 His Kinase A (phosphoacceptor) domain MS7_RS09070 SM00448 cheY-homologous receiver domain MS7_RS09070 SM00862 Transcriptional regulatory protein, C terminal MS7_RS09080 SM01329 MS7_RS09080 MS7_RS09115 SM00919 Malic enzyme, NAD binding domain MS7_RS09115 SM01274 MS7_RS09115 MS7_RS09120 SM00481 DNA polymerase alpha chain like domain MS7_RS09130 SM00116 Domain in cystathionine beta-synthase and other proteins. MS7_RS09140 SM00849 Metallo-beta-lactamase superfamily MS7_RS09155 SM01002 Alanine dehydrogenase/PNT, C-terminal domain MS7_RS09155 SM01003 Alanine dehydrogenase/PNT, N-terminal domain MS7_RS09185 SM00981 MS7_RS09185 MS7_RS09205 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. MS7_RS09210 SM00363 S4 RNA-binding domain MS7_RS09210 SM01390 MS7_RS09210 MS7_RS09255 SM00563 Phosphate acyltransferases MS7_RS09260 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. MS7_RS09265 SM00363 S4 RNA-binding domain MS7_RS09280 SM00725 NEAr Transporter domain MS7_RS09310 SM00354 helix_turn _helix lactose operon repressor MS7_RS09320 SM00830 Chorismate mutase type II MS7_RS09345 SM00843 MS7_RS09345 MS7_RS09375 SM00849 Metallo-beta-lactamase superfamily MS7_RS09405 SM00363 S4 RNA-binding domain MS7_RS09425 SM00450 Rhodanese Homology Domain MS7_RS09440 SM00729 Elongator protein 3, MiaB family, Radical SAM MS7_RS09450 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS09495 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MS7_RS09505 SM00047 Lysozyme subfamily 2 MS7_RS09585 SM01234 MS7_RS09585 MS7_RS09605 SM00894 Excalibur calcium-binding domain MS7_RS09720 SM00382 ATPases associated with a variety of cellular activities MS7_RS09735 SM01260 MS7_RS09735 MS7_RS09860 SM00382 ATPases associated with a variety of cellular activities MS7_RS09885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MS7_RS09915 SM00530 Helix-turn-helix XRE-family like proteins MS7_RS09920 SM00421 helix_turn_helix, Lux Regulon MS7_RS09920 SM00448 cheY-homologous receiver domain MS7_RS09965 SM00382 ATPases associated with a variety of cellular activities MS7_RS09970 SM00062 Bacterial periplasmic substrate-binding proteins MS7_RS10160 SM00382 ATPases associated with a variety of cellular activities MS7_RS10170 SM00478 endonuclease III MS7_RS10240 SM00226 Low molecular weight phosphatase family MS7_RS10255 SM00421 helix_turn_helix, Lux Regulon MS7_RS10255 SM00448 cheY-homologous receiver domain MS7_RS10260 SM00387 Histidine kinase-like ATPases MS7_RS10330 SM00479 MS7_RS10330 MS7_RS10350 SM00046 Diacylglycerol kinase catalytic domain (presumed) MS7_RS10365 SM00845 GatB domain MS7_RS10390 SM00278 Helix-hairpin-helix DNA-binding motif class 1 MS7_RS10390 SM00292 breast cancer carboxy-terminal domain MS7_RS10390 SM00532 Ligase N family MS7_RS10410 SM00998 Adenylosuccinate lyase C-terminus MS7_RS10465 SM00710 Parallel beta-helix repeats MS7_RS10475 SM01131 MS7_RS10475 MS7_RS10535 SM00382 ATPases associated with a variety of cellular activities MS7_RS10545 SM00382 ATPases associated with a variety of cellular activities MS7_RS10550 SM00345 helix_turn_helix gluconate operon transcriptional repressor MS7_RS10605 SM00287 Bacterial SH3 domain homologues MS7_RS10680 SM00635 Bacterial Ig-like domain 2 MS7_RS10740 SM00507 HNH nucleases MS7_RS10880 SM01040 BRO family, N-terminal domain MS7_RS10890 SM00530 Helix-turn-helix XRE-family like proteins MS7_RS10895 SM00910 MS7_RS10895 MS7_RS10955 SM00883 Chaperonin 10 Kd subunit MS7_RS10985 SM00793 Accessory gene regulator B MS7_RS10990 SM00794 Staphylococcal AgrD protein MS7_RS11000 SM00448 cheY-homologous receiver domain MS7_RS11000 SM00850 LytTr DNA-binding domain MS7_RS11015 SM00640 Glycosyl hydrolases family 32 MS7_RS11020 SM00354 helix_turn _helix lactose operon repressor MS7_RS11040 SM00881 CoA binding domain MS7_RS11045 SM00382 ATPases associated with a variety of cellular activities MS7_RS11055 SM00534 ATPase domain of DNA mismatch repair MUTS family MS7_RS11105 SM00917 LeuA allosteric (dimerisation) domain MS7_RS11110 SM01329 MS7_RS11110 MS7_RS11155 SM00731 SprT homologues. MS7_RS11160 SM00316 Ribosomal protein S1-like RNA-binding domain MS7_RS11160 SM00732 Likely ribonuclease with RNase H fold. MS7_RS11180 SM00331 Sigma factor PP2C-like phosphatases MS7_RS11180 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain MS7_RS11200 SM01005 Alanine racemase, C-terminal domain MS7_RS11245 SM00387 Histidine kinase-like ATPases MS7_RS11245 SM00388 His Kinase A (phosphoacceptor) domain MS7_RS11250 SM00448 cheY-homologous receiver domain MS7_RS11250 SM00862 Transcriptional regulatory protein, C terminal MS7_RS11255 SM00487 DEAD-like helicases superfamily MS7_RS11255 SM00490 helicase superfamily c-terminal domain MS7_RS11290 SM00155 Phospholipase D. Active site motifs. MS7_RS11295 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. MS7_RS11370 SM00382 ATPases associated with a variety of cellular activities MS7_RS11430 SM00226 Low molecular weight phosphatase family MS7_RS11445 SM00937 MS7_RS11445 MS7_RS11460 SM00357 Cold shock protein domain MS7_RS11460 SM00382 ATPases associated with a variety of cellular activities MS7_RS11460 SM00959 Rho termination factor, N-terminal domain MS7_RS11555 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain MS7_RS11565 SM01133 MS7_RS11565 MS7_RS11605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor MS7_RS11630 SM00382 ATPases associated with a variety of cellular activities MS7_RS11840 SM00829 Enoylreductase MS7_RS11845 SM00829 Enoylreductase MS7_RS11870 SM01133 MS7_RS11870 MS7_RS11890 SM00420 helix_turn_helix, Deoxyribose operon repressor MS7_RS11890 SM01134 MS7_RS11890 MS7_RS11915 SM00422 helix_turn_helix, mercury resistance MS7_RS12020 SM00382 ATPases associated with a variety of cellular activities MS7_RS12025 SM00382 ATPases associated with a variety of cellular activities MS7_RS12035 SM00662 RNA polymerases D MS7_RS12055 SM00316 Ribosomal protein S1-like RNA-binding domain MS7_RS12110 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. MS7_RS12115 SM01374 MS7_RS12115 MS7_RS12135 SM00322 K homology RNA-binding domain MS7_RS12150 SM01382 MS7_RS12150 MS7_RS12150 SM01383 MS7_RS12150 MS7_RS12170 SM01403 MS7_RS12170 MS7_RS12185 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain MS7_RS12185 SM00437 Bacterial DNA topoisomerase I DNA-binding domain MS7_RS12185 SM00493 MS7_RS12185 MS7_RS12245 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS12265 SM00729 Elongator protein 3, MiaB family, Radical SAM MS7_RS12290 SM00852 Probable molybdopterin binding domain MS7_RS12300 SM00852 Probable molybdopterin binding domain MS7_RS12310 SM00382 ATPases associated with a variety of cellular activities MS7_RS12375 SM00988 UreE urease accessory protein, N-terminal domain MS7_RS12415 SM00342 helix_turn_helix, arabinose operon control protein MS7_RS12465 SM00047 Lysozyme subfamily 2 MS7_RS12480 SM00926 Molybdopterin oxidoreductase Fe4S4 domain MS7_RS12480 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region MS7_RS12495 SM00420 helix_turn_helix, Deoxyribose operon repressor MS7_RS12640 SM00382 ATPases associated with a variety of cellular activities MS7_RS12725 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS12735 SM00382 ATPases associated with a variety of cellular activities MS7_RS12745 SM00448 cheY-homologous receiver domain MS7_RS12745 SM00862 Transcriptional regulatory protein, C terminal MS7_RS12750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain MS7_RS12750 SM00387 Histidine kinase-like ATPases MS7_RS12750 SM00388 His Kinase A (phosphoacceptor) domain MS7_RS12755 SM00850 LytTr DNA-binding domain MS7_RS12790 SM00829 Enoylreductase MS7_RS12845 SM00342 helix_turn_helix, arabinose operon control protein MS7_RS12870 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS12885 SM00421 helix_turn_helix, Lux Regulon MS7_RS12885 SM00448 cheY-homologous receiver domain MS7_RS12890 SM00387 Histidine kinase-like ATPases MS7_RS12915 SM00926 Molybdopterin oxidoreductase Fe4S4 domain MS7_RS12995 SM00382 ATPases associated with a variety of cellular activities MS7_RS13005 SM00062 Bacterial periplasmic substrate-binding proteins MS7_RS13005 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. MS7_RS13020 SM00855 Phosphoglycerate mutase family MS7_RS13075 SM00729 Elongator protein 3, MiaB family, Radical SAM MS7_RS13075 SM00876 Biotin and Thiamin Synthesis associated domain MS7_RS13100 SM00382 ATPases associated with a variety of cellular activities MS7_RS13105 SM00382 ATPases associated with a variety of cellular activities MS7_RS13140 SM00871 Bacterial transcription activator, effector binding domain MS7_RS13220 SM00116 Domain in cystathionine beta-synthase and other proteins. MS7_RS13220 SM00382 ATPases associated with a variety of cellular activities MS7_RS13260 SM00382 ATPases associated with a variety of cellular activities MS7_RS13305 SM00382 ATPases associated with a variety of cellular activities MS7_RS13310 SM00382 ATPases associated with a variety of cellular activities MS7_RS13410 SM00487 DEAD-like helicases superfamily MS7_RS13410 SM00490 helicase superfamily c-terminal domain MS7_RS13445 SM01208 MS7_RS13445 MS7_RS13495 SM00345 helix_turn_helix gluconate operon transcriptional repressor MS7_RS13495 SM00895 MS7_RS13495 MS7_RS13500 SM00422 helix_turn_helix, mercury resistance MS7_RS13505 SM00954 Region found in RelA / SpoT proteins MS7_RS13540 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS13545 SM00382 ATPases associated with a variety of cellular activities MS7_RS13580 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS13610 SM00382 ATPases associated with a variety of cellular activities MS7_RS13735 SM00382 ATPases associated with a variety of cellular activities MS7_RS13735 SM01086 C-terminal, D2-small domain, of ClpB protein MS7_RS13750 SM00899 MS7_RS13750 MS7_RS13775 SM01266 MS7_RS13775 MS7_RS13970 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain MS7_RS14155 SM00382 ATPases associated with a variety of cellular activities MS7_RS14160 SM00387 Histidine kinase-like ATPases MS7_RS14165 SM00448 cheY-homologous receiver domain MS7_RS14165 SM00862 Transcriptional regulatory protein, C terminal MS7_RS14180 SM00098 Alkaline phosphatase homologues MS7_RS14185 SM00347 helix_turn_helix multiple antibiotic resistance protein MS7_RS14270 SM00047 Lysozyme subfamily 2 MS7_RS14295 SM00957 SecA DEAD-like domain MS7_RS14295 SM00958 SecA preprotein cross-linking domain MS7_RS14325 SM00903 Flavin reductase like domain MS7_RS14345 SM00903 Flavin reductase like domain MS7_RS14470 SM00382 ATPases associated with a variety of cellular activities MS7_RS14485 SM00867 YceI-like domain MS7_RS14500 SM00450 Rhodanese Homology Domain MS7_RS14555 SM00382 ATPases associated with a variety of cellular activities MS7_RS14570 SM00357 Cold shock protein domain MS7_RS14575 SM00530 Helix-turn-helix XRE-family like proteins MS7_RS14590 SM00470 ParB-like nuclease domain MS7_RS14600 SM01228 MS7_RS14600