KQ76_RS00005 SM00382 ATPases associated with a variety of cellular activities KQ76_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain KQ76_RS00010 SM00480 DNA polymerase III beta subunit KQ76_RS00025 SM00387 Histidine kinase-like ATPases KQ76_RS00025 SM00433 TopoisomeraseII KQ76_RS00030 SM00434 DNA Topoisomerase IV KQ76_RS00070 SM00267 diguanylate cyclase KQ76_RS00085 SM00788 Adenylosuccinate synthetase KQ76_RS00100 SM00448 cheY-homologous receiver domain KQ76_RS00100 SM00862 Transcriptional regulatory protein, C terminal KQ76_RS00105 SM00091 PAS domain KQ76_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KQ76_RS00105 SM00387 Histidine kinase-like ATPases KQ76_RS00105 SM00388 His Kinase A (phosphoacceptor) domain KQ76_RS00120 SM00849 Metallo-beta-lactamase superfamily KQ76_RS00165 SM00382 ATPases associated with a variety of cellular activities KQ76_RS00245 SM00148 Phospholipase C, catalytic domain (part); domain X KQ76_RS00255 SM00342 helix_turn_helix, arabinose operon control protein KQ76_RS00290 SM00257 Lysin motif KQ76_RS00295 SM00347 helix_turn_helix multiple antibiotic resistance protein KQ76_RS00355 SM00470 ParB-like nuclease domain KQ76_RS00370 SM00822 KQ76_RS00370 KQ76_RS00415 SM00345 helix_turn_helix gluconate operon transcriptional repressor KQ76_RS00435 SM01133 KQ76_RS00435 KQ76_RS00455 SM00382 ATPases associated with a variety of cellular activities KQ76_RS00460 SM00062 Bacterial periplasmic substrate-binding proteins KQ76_RS00480 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS00560 SM00984 UDP binding domain KQ76_RS00600 SM00382 ATPases associated with a variety of cellular activities KQ76_RS00660 SM00859 Semialdehyde dehydrogenase, NAD binding domain KQ76_RS00715 SM00487 DEAD-like helicases superfamily KQ76_RS00725 SM00382 ATPases associated with a variety of cellular activities KQ76_RS00760 SM00382 ATPases associated with a variety of cellular activities KQ76_RS00805 SM00342 helix_turn_helix, arabinose operon control protein KQ76_RS00805 SM00448 cheY-homologous receiver domain KQ76_RS00880 SM00882 Coenzyme A transferase KQ76_RS00965 SM00829 Enoylreductase KQ76_RS00975 SM00829 Enoylreductase KQ76_RS01030 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KQ76_RS01030 SM00387 Histidine kinase-like ATPases KQ76_RS01035 SM00448 cheY-homologous receiver domain KQ76_RS01035 SM00850 LytTr DNA-binding domain KQ76_RS01055 SM00345 helix_turn_helix gluconate operon transcriptional repressor KQ76_RS01055 SM00866 KQ76_RS01055 KQ76_RS01100 SM00354 helix_turn _helix lactose operon repressor KQ76_RS01130 SM00382 ATPases associated with a variety of cellular activities KQ76_RS01310 SM00382 ATPases associated with a variety of cellular activities KQ76_RS01340 SM01130 KQ76_RS01340 KQ76_RS01395 SM00506 Appr-1"-p processing enzyme KQ76_RS01435 SM00347 helix_turn_helix multiple antibiotic resistance protein KQ76_RS01515 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS01525 SM00382 ATPases associated with a variety of cellular activities KQ76_RS01575 SM00470 ParB-like nuclease domain KQ76_RS01625 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS01630 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS01655 SM00942 Primase C terminal 1 (PriCT-1) KQ76_RS01760 SM00855 Phosphoglycerate mutase family KQ76_RS01830 SM00116 Domain in cystathionine beta-synthase and other proteins. KQ76_RS01830 SM01240 KQ76_RS01830 KQ76_RS02005 SM00833 Cobalamin synthesis protein cobW C-terminal domain KQ76_RS02035 SM00014 Acid phosphatase homologues KQ76_RS02065 SM00382 ATPases associated with a variety of cellular activities KQ76_RS02065 SM00930 KQ76_RS02065 KQ76_RS02080 SM00257 Lysin motif KQ76_RS02135 SM00642 Alpha-amylase domain KQ76_RS02140 SM00345 helix_turn_helix gluconate operon transcriptional repressor KQ76_RS02140 SM00866 KQ76_RS02140 KQ76_RS02155 SM00382 ATPases associated with a variety of cellular activities KQ76_RS02165 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KQ76_RS02165 SM00493 KQ76_RS02165 KQ76_RS02225 SM00465 GIY-YIG type nucleases (URI domain) KQ76_RS02250 SM00493 KQ76_RS02250 KQ76_RS02255 SM00650 Ribosomal RNA adenine dimethylases KQ76_RS02295 SM01400 KQ76_RS02295 KQ76_RS02315 SM00487 DEAD-like helicases superfamily KQ76_RS02315 SM00490 helicase superfamily c-terminal domain KQ76_RS02315 SM00982 KQ76_RS02315 KQ76_RS02315 SM01058 CarD-like/TRCF domain KQ76_RS02330 SM00363 S4 RNA-binding domain KQ76_RS02340 SM00316 Ribosomal protein S1-like RNA-binding domain KQ76_RS02345 SM00977 TilS substrate C-terminal domain KQ76_RS02355 SM00382 ATPases associated with a variety of cellular activities KQ76_RS02375 SM00905 Dihydroneopterin aldolase KQ76_RS02475 SM00345 helix_turn_helix gluconate operon transcriptional repressor KQ76_RS02515 SM00382 ATPases associated with a variety of cellular activities KQ76_RS02515 SM01086 C-terminal, D2-small domain, of ClpB protein KQ76_RS02525 SM00382 ATPases associated with a variety of cellular activities KQ76_RS02530 SM00670 Large family of predicted nucleotide-binding domains KQ76_RS02545 SM00840 KQ76_RS02545 KQ76_RS02555 SM00967 RNA 2'-O ribose methyltransferase substrate binding KQ76_RS02575 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. KQ76_RS02575 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KQ76_RS02580 SM00649 Ribosomal protein L11/L12 KQ76_RS02610 SM00663 RNA polymerase I subunit A N-terminus KQ76_RS02630 SM00838 Elongation factor G C-terminus KQ76_RS02630 SM00889 Elongation factor G, domain IV KQ76_RS02745 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KQ76_RS02795 SM00986 Uracil DNA glycosylase superfamily KQ76_RS02795 SM00987 UreE urease accessory protein, C-terminal domain KQ76_RS02915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KQ76_RS02925 SM00829 Enoylreductase KQ76_RS02940 SM00836 DALR anticodon binding domain KQ76_RS02940 SM01016 Arginyl tRNA synthetase N terminal dom KQ76_RS02945 SM00478 endonuclease III KQ76_RS03070 SM00382 ATPases associated with a variety of cellular activities KQ76_RS03075 SM00529 Helix-turn-helix diphteria tox regulatory element KQ76_RS03075 SM00899 KQ76_RS03075 KQ76_RS03090 SM00382 ATPases associated with a variety of cellular activities KQ76_RS03120 SM00382 ATPases associated with a variety of cellular activities KQ76_RS03140 SM00382 ATPases associated with a variety of cellular activities KQ76_RS03160 SM01120 KQ76_RS03160 KQ76_RS03205 SM00448 cheY-homologous receiver domain KQ76_RS03205 SM00862 Transcriptional regulatory protein, C terminal KQ76_RS03210 SM00387 Histidine kinase-like ATPases KQ76_RS03215 SM00382 ATPases associated with a variety of cellular activities KQ76_RS03235 SM00257 Lysin motif KQ76_RS03245 SM00342 helix_turn_helix, arabinose operon control protein KQ76_RS03340 SM00382 ATPases associated with a variety of cellular activities KQ76_RS03345 SM00382 ATPases associated with a variety of cellular activities KQ76_RS03350 SM00347 helix_turn_helix multiple antibiotic resistance protein KQ76_RS03355 SM00833 Cobalamin synthesis protein cobW C-terminal domain KQ76_RS03410 SM00420 helix_turn_helix, Deoxyribose operon repressor KQ76_RS03410 SM01134 KQ76_RS03410 KQ76_RS03435 SM01091 Transporter associated domain KQ76_RS03450 SM00387 Histidine kinase-like ATPases KQ76_RS03450 SM00388 His Kinase A (phosphoacceptor) domain KQ76_RS03455 SM00448 cheY-homologous receiver domain KQ76_RS03455 SM00862 Transcriptional regulatory protein, C terminal KQ76_RS03510 SM00796 Allophanate hydrolase subunit 1 KQ76_RS03515 SM00797 Allophanate hydrolase subunit 2 KQ76_RS03530 SM00382 ATPases associated with a variety of cellular activities KQ76_RS03535 SM00341 Helicase and RNase D C-terminal KQ76_RS03535 SM00487 DEAD-like helicases superfamily KQ76_RS03535 SM00490 helicase superfamily c-terminal domain KQ76_RS03535 SM00956 KQ76_RS03535 KQ76_RS03540 SM00382 ATPases associated with a variety of cellular activities KQ76_RS03560 SM00046 Diacylglycerol kinase catalytic domain (presumed) KQ76_RS03615 SM00382 ATPases associated with a variety of cellular activities KQ76_RS03670 SM00267 diguanylate cyclase KQ76_RS03690 SM00487 DEAD-like helicases superfamily KQ76_RS03690 SM00490 helicase superfamily c-terminal domain KQ76_RS03705 SM00957 SecA DEAD-like domain KQ76_RS03705 SM00958 SecA preprotein cross-linking domain KQ76_RS03715 SM00937 KQ76_RS03715 KQ76_RS03725 SM00257 Lysin motif KQ76_RS03740 SM00487 DEAD-like helicases superfamily KQ76_RS03740 SM00490 helicase superfamily c-terminal domain KQ76_RS03770 SM00028 Tetratricopeptide repeats KQ76_RS03805 SM00919 Malic enzyme, NAD binding domain KQ76_RS03805 SM01274 KQ76_RS03805 KQ76_RS03825 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KQ76_RS03845 SM01192 KQ76_RS03845 KQ76_RS03845 SM01193 KQ76_RS03845 KQ76_RS03865 SM00316 Ribosomal protein S1-like RNA-binding domain KQ76_RS03865 SM00357 Cold shock protein domain KQ76_RS03865 SM00955 KQ76_RS03865 KQ76_RS03920 SM00318 Staphylococcal nuclease homologues KQ76_RS03925 SM00357 Cold shock protein domain KQ76_RS03965 SM00855 Phosphoglycerate mutase family KQ76_RS04020 SM00493 KQ76_RS04020 KQ76_RS04030 SM00382 ATPases associated with a variety of cellular activities KQ76_RS04030 SM00930 KQ76_RS04030 KQ76_RS04055 SM00382 ATPases associated with a variety of cellular activities KQ76_RS04115 SM00729 Elongator protein 3, MiaB family, Radical SAM KQ76_RS04260 SM01298 KQ76_RS04260 KQ76_RS04270 SM00316 Ribosomal protein S1-like RNA-binding domain KQ76_RS04285 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KQ76_RS04370 SM00382 ATPases associated with a variety of cellular activities KQ76_RS04370 SM01086 C-terminal, D2-small domain, of ClpB protein KQ76_RS04415 SM00825 Beta-ketoacyl synthase KQ76_RS04435 SM00382 ATPases associated with a variety of cellular activities KQ76_RS04440 SM00382 ATPases associated with a variety of cellular activities KQ76_RS04465 SM00382 ATPases associated with a variety of cellular activities KQ76_RS04470 SM00382 ATPases associated with a variety of cellular activities KQ76_RS04535 SM01118 KQ76_RS04535 KQ76_RS04545 SM00954 Region found in RelA / SpoT proteins KQ76_RS04560 SM00116 Domain in cystathionine beta-synthase and other proteins. KQ76_RS04560 SM00924 MgtE intracellular N domain KQ76_RS04635 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KQ76_RS04665 SM00914 KQ76_RS04665 KQ76_RS04705 SM00382 ATPases associated with a variety of cellular activities KQ76_RS04885 SM00347 helix_turn_helix multiple antibiotic resistance protein KQ76_RS04895 SM00047 Lysozyme subfamily 2 KQ76_RS04895 SM00644 KQ76_RS04895 KQ76_RS04960 SM01001 AIR carboxylase KQ76_RS04980 SM01211 KQ76_RS04980 KQ76_RS05005 SM00798 AICARFT/IMPCHase bienzyme KQ76_RS05005 SM00851 MGS-like domain KQ76_RS05010 SM01209 KQ76_RS05010 KQ76_RS05010 SM01210 KQ76_RS05010 KQ76_RS05020 SM00382 ATPases associated with a variety of cellular activities KQ76_RS05090 SM00849 Metallo-beta-lactamase superfamily KQ76_RS05120 SM00861 Transketolase, pyrimidine binding domain KQ76_RS05140 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS05145 SM00382 ATPases associated with a variety of cellular activities KQ76_RS05195 SM00838 Elongation factor G C-terminus KQ76_RS05220 SM00878 Biotin carboxylase C-terminal domain KQ76_RS05300 SM00725 NEAr Transporter domain KQ76_RS05305 SM00725 NEAr Transporter domain KQ76_RS05310 SM00725 NEAr Transporter domain KQ76_RS05345 SM00967 RNA 2'-O ribose methyltransferase substrate binding KQ76_RS05355 SM00873 B3/4 domain KQ76_RS05355 SM00874 tRNA synthetase B5 domain KQ76_RS05355 SM00896 Ferredoxin-fold anticodon binding domain KQ76_RS05375 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KQ76_RS05375 SM00481 DNA polymerase alpha chain like domain KQ76_RS05375 SM00483 DNA polymerase X family KQ76_RS05380 SM00463 Small MutS-related domain KQ76_RS05380 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KQ76_RS05380 SM00534 ATPase domain of DNA mismatch repair MUTS family KQ76_RS05395 SM00465 GIY-YIG type nucleases (URI domain) KQ76_RS05585 SM00740 KQ76_RS05585 KQ76_RS05605 SM00842 Cell division protein FtsA KQ76_RS05610 SM00864 Tubulin/FtsZ family, GTPase domain KQ76_RS05610 SM00865 Tubulin/FtsZ family, C-terminal domain KQ76_RS05635 SM00363 S4 RNA-binding domain KQ76_RS05665 SM00363 S4 RNA-binding domain KQ76_RS05690 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain KQ76_RS05695 SM00851 MGS-like domain KQ76_RS05695 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KQ76_RS05695 SM01209 KQ76_RS05695 KQ76_RS05700 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family KQ76_RS05725 SM00072 Guanylate kinase homologues. KQ76_RS05730 SM01409 KQ76_RS05730 KQ76_RS05740 SM00487 DEAD-like helicases superfamily KQ76_RS05740 SM00490 helicase superfamily c-terminal domain KQ76_RS05775 SM00331 Sigma factor PP2C-like phosphatases KQ76_RS05775 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KQ76_RS05780 SM00220 Serine/Threonine protein kinases, catalytic domain KQ76_RS05780 SM00740 KQ76_RS05780 KQ76_RS05795 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain KQ76_RS05810 SM01120 KQ76_RS05810 KQ76_RS05810 SM01121 KQ76_RS05810 KQ76_RS05815 SM00487 DEAD-like helicases superfamily KQ76_RS05815 SM00490 helicase superfamily c-terminal domain KQ76_RS05830 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. KQ76_RS05835 SM00822 KQ76_RS05835 KQ76_RS05850 SM00358 Double-stranded RNA binding motif KQ76_RS05850 SM00535 Ribonuclease III family KQ76_RS05855 SM00968 SMC proteins Flexible Hinge Domain KQ76_RS05860 SM00382 ATPases associated with a variety of cellular activities KQ76_RS05860 SM00962 SRP54-type protein, GTPase domain KQ76_RS05860 SM00963 SRP54-type protein, helical bundle domain KQ76_RS05870 SM00382 ATPases associated with a variety of cellular activities KQ76_RS05870 SM00962 SRP54-type protein, GTPase domain KQ76_RS05870 SM00963 SRP54-type protein, helical bundle domain KQ76_RS05920 SM00881 CoA binding domain KQ76_RS05925 SM00257 Lysin motif KQ76_RS05940 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KQ76_RS05940 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KQ76_RS05940 SM00493 KQ76_RS05940 KQ76_RS05960 SM00382 ATPases associated with a variety of cellular activities KQ76_RS05960 SM01086 C-terminal, D2-small domain, of ClpB protein KQ76_RS06020 SM00479 KQ76_RS06020 KQ76_RS06020 SM00481 DNA polymerase alpha chain like domain KQ76_RS06030 SM00316 Ribosomal protein S1-like RNA-binding domain KQ76_RS06030 SM00322 K homology RNA-binding domain KQ76_RS06060 SM00904 Riboflavin kinase KQ76_RS06065 SM01387 KQ76_RS06065 KQ76_RS06070 SM00316 Ribosomal protein S1-like RNA-binding domain KQ76_RS06070 SM00322 K homology RNA-binding domain KQ76_RS06075 SM00849 Metallo-beta-lactamase superfamily KQ76_RS06080 SM00382 ATPases associated with a variety of cellular activities KQ76_RS06080 SM00843 KQ76_RS06080 KQ76_RS06085 SM00345 helix_turn_helix gluconate operon transcriptional repressor KQ76_RS06085 SM00866 KQ76_RS06085 KQ76_RS06110 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS06120 SM00852 Probable molybdopterin binding domain KQ76_RS06125 SM00382 ATPases associated with a variety of cellular activities KQ76_RS06130 SM00322 K homology RNA-binding domain KQ76_RS06130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KQ76_RS06160 SM00729 Elongator protein 3, MiaB family, Radical SAM KQ76_RS06175 SM00533 DNA-binding domain of DNA mismatch repair MUTS family KQ76_RS06175 SM00534 ATPase domain of DNA mismatch repair MUTS family KQ76_RS06180 SM00853 MutL C terminal dimerisation domain KQ76_RS06180 SM01340 KQ76_RS06180 KQ76_RS06235 SM00422 helix_turn_helix, mercury resistance KQ76_RS06240 SM01230 KQ76_RS06240 KQ76_RS06370 SM00155 Phospholipase D. Active site motifs. KQ76_RS06375 SM00382 ATPases associated with a variety of cellular activities KQ76_RS06390 SM00421 helix_turn_helix, Lux Regulon KQ76_RS06390 SM00448 cheY-homologous receiver domain KQ76_RS06400 SM00318 Staphylococcal nuclease homologues KQ76_RS06455 SM01060 KQ76_RS06455 KQ76_RS06470 SM01240 KQ76_RS06470 KQ76_RS06500 SM00861 Transketolase, pyrimidine binding domain KQ76_RS06555 SM01207 KQ76_RS06555 KQ76_RS06560 SM00387 Histidine kinase-like ATPases KQ76_RS06560 SM00433 TopoisomeraseII KQ76_RS06565 SM00434 DNA Topoisomerase IV KQ76_RS06580 SM01061 CAT RNA binding domain KQ76_RS06690 SM00382 ATPases associated with a variety of cellular activities KQ76_RS06695 SM00382 ATPases associated with a variety of cellular activities KQ76_RS06730 SM00382 ATPases associated with a variety of cellular activities KQ76_RS06755 SM00382 ATPases associated with a variety of cellular activities KQ76_RS06765 SM00859 Semialdehyde dehydrogenase, NAD binding domain KQ76_RS06770 SM01130 KQ76_RS06770 KQ76_RS06790 SM01005 Alanine racemase, C-terminal domain KQ76_RS06805 SM00357 Cold shock protein domain KQ76_RS06840 SM00327 von Willebrand factor (vWF) type A domain KQ76_RS06865 SM00861 Transketolase, pyrimidine binding domain KQ76_RS06870 SM00387 Histidine kinase-like ATPases KQ76_RS06870 SM00388 His Kinase A (phosphoacceptor) domain KQ76_RS06875 SM00448 cheY-homologous receiver domain KQ76_RS06875 SM00862 Transcriptional regulatory protein, C terminal KQ76_RS06890 SM00014 Acid phosphatase homologues KQ76_RS06905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KQ76_RS06905 SM00245 tail specific protease KQ76_RS06960 SM00567 E-Z type HEAT repeats KQ76_RS06960 SM00932 Scaffold protein Nfu/NifU N terminal KQ76_RS06965 SM00932 Scaffold protein Nfu/NifU N terminal KQ76_RS06990 SM00844 GA module KQ76_RS07010 SM01002 Alanine dehydrogenase/PNT, C-terminal domain KQ76_RS07010 SM01003 Alanine dehydrogenase/PNT, N-terminal domain KQ76_RS07015 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KQ76_RS07015 SM00475 5'-3' exonuclease KQ76_RS07035 SM00981 KQ76_RS07035 KQ76_RS07075 SM00478 endonuclease III KQ76_RS07075 SM00525 KQ76_RS07075 KQ76_RS07090 SM00479 KQ76_RS07090 KQ76_RS07090 SM00491 KQ76_RS07090 KQ76_RS07125 SM00914 KQ76_RS07125 KQ76_RS07130 SM00028 Tetratricopeptide repeats KQ76_RS07150 SM00562 KQ76_RS07150 KQ76_RS07175 SM00411 bacterial (prokaryotic) histone like domain KQ76_RS07190 SM00316 Ribosomal protein S1-like RNA-binding domain KQ76_RS07215 SM00870 KQ76_RS07215 KQ76_RS07230 SM00257 Lysin motif KQ76_RS07235 SM00487 DEAD-like helicases superfamily KQ76_RS07235 SM00490 helicase superfamily c-terminal domain KQ76_RS07295 SM00287 Bacterial SH3 domain homologues KQ76_RS07295 SM00646 KQ76_RS07295 KQ76_RS07345 SM00635 Bacterial Ig-like domain 2 KQ76_RS07405 SM00507 HNH nucleases KQ76_RS07585 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS07590 SM00910 KQ76_RS07590 KQ76_RS07625 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KQ76_RS07625 SM00387 Histidine kinase-like ATPases KQ76_RS07625 SM00388 His Kinase A (phosphoacceptor) domain KQ76_RS07630 SM00448 cheY-homologous receiver domain KQ76_RS07630 SM00862 Transcriptional regulatory protein, C terminal KQ76_RS07635 SM00363 S4 RNA-binding domain KQ76_RS07700 SM00342 helix_turn_helix, arabinose operon control protein KQ76_RS07700 SM00871 Bacterial transcription activator, effector binding domain KQ76_RS07705 SM00642 Alpha-amylase domain KQ76_RS07710 SM00354 helix_turn _helix lactose operon repressor KQ76_RS07735 SM01350 KQ76_RS07735 KQ76_RS07765 SM00861 Transketolase, pyrimidine binding domain KQ76_RS07815 SM00878 Biotin carboxylase C-terminal domain KQ76_RS07825 SM00841 Elongation factor P, C-terminal KQ76_RS07825 SM01185 KQ76_RS07825 KQ76_RS07850 SM00450 Rhodanese Homology Domain KQ76_RS07910 SM00849 Metallo-beta-lactamase superfamily KQ76_RS07965 SM00382 ATPases associated with a variety of cellular activities KQ76_RS07970 SM00518 AP endonuclease family 2 KQ76_RS07975 SM00487 DEAD-like helicases superfamily KQ76_RS07975 SM00490 helicase superfamily c-terminal domain KQ76_RS07995 SM00400 zinc finger KQ76_RS07995 SM00493 KQ76_RS07995 KQ76_RS08005 SM00116 Domain in cystathionine beta-synthase and other proteins. KQ76_RS08065 SM00729 Elongator protein 3, MiaB family, Radical SAM KQ76_RS08080 SM00271 DnaJ molecular chaperone homology domain KQ76_RS08100 SM00729 Elongator protein 3, MiaB family, Radical SAM KQ76_RS08105 SM00838 Elongation factor G C-terminus KQ76_RS08120 SM00849 Metallo-beta-lactamase superfamily KQ76_RS08130 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KQ76_RS08145 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KQ76_RS08155 SM01103 KQ76_RS08155 KQ76_RS08215 SM00878 Biotin carboxylase C-terminal domain KQ76_RS08225 SM00797 Allophanate hydrolase subunit 2 KQ76_RS08230 SM00796 Allophanate hydrolase subunit 1 KQ76_RS08265 SM00732 Likely ribonuclease with RNase H fold. KQ76_RS08275 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KQ76_RS08280 SM00382 ATPases associated with a variety of cellular activities KQ76_RS08285 SM00028 Tetratricopeptide repeats KQ76_RS08320 SM00382 ATPases associated with a variety of cellular activities KQ76_RS08345 SM00287 Bacterial SH3 domain homologues KQ76_RS08345 SM00646 KQ76_RS08345 KQ76_RS08355 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KQ76_RS08355 SM00954 Region found in RelA / SpoT proteins KQ76_RS08375 SM01323 KQ76_RS08375 KQ76_RS08390 SM00382 ATPases associated with a variety of cellular activities KQ76_RS08395 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KQ76_RS08495 SM01004 Delta-aminolevulinic acid dehydratase KQ76_RS08525 SM00382 ATPases associated with a variety of cellular activities KQ76_RS08525 SM00994 ClpX C4-type zinc finger KQ76_RS08525 SM01086 C-terminal, D2-small domain, of ClpB protein KQ76_RS08575 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain KQ76_RS08600 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KQ76_RS08610 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain KQ76_RS08610 SM01232 KQ76_RS08610 KQ76_RS08615 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs KQ76_RS08615 SM00474 3'-5' exonuclease KQ76_RS08615 SM00475 5'-3' exonuclease KQ76_RS08615 SM00482 DNA polymerase A domain KQ76_RS08625 SM00387 Histidine kinase-like ATPases KQ76_RS08625 SM00388 His Kinase A (phosphoacceptor) domain KQ76_RS08630 SM00448 cheY-homologous receiver domain KQ76_RS08630 SM00862 Transcriptional regulatory protein, C terminal KQ76_RS08640 SM01329 KQ76_RS08640 KQ76_RS08675 SM00919 Malic enzyme, NAD binding domain KQ76_RS08675 SM01274 KQ76_RS08675 KQ76_RS08680 SM00481 DNA polymerase alpha chain like domain KQ76_RS08690 SM00116 Domain in cystathionine beta-synthase and other proteins. KQ76_RS08700 SM00849 Metallo-beta-lactamase superfamily KQ76_RS08715 SM01002 Alanine dehydrogenase/PNT, C-terminal domain KQ76_RS08715 SM01003 Alanine dehydrogenase/PNT, N-terminal domain KQ76_RS08745 SM00981 KQ76_RS08745 KQ76_RS08765 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. KQ76_RS08770 SM00363 S4 RNA-binding domain KQ76_RS08770 SM01390 KQ76_RS08770 KQ76_RS08815 SM00563 Phosphate acyltransferases KQ76_RS08820 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. KQ76_RS08825 SM00363 S4 RNA-binding domain KQ76_RS08840 SM00725 NEAr Transporter domain KQ76_RS08870 SM00354 helix_turn _helix lactose operon repressor KQ76_RS08880 SM00830 Chorismate mutase type II KQ76_RS08905 SM00843 KQ76_RS08905 KQ76_RS08935 SM00849 Metallo-beta-lactamase superfamily KQ76_RS08965 SM00363 S4 RNA-binding domain KQ76_RS08985 SM00450 Rhodanese Homology Domain KQ76_RS09000 SM00729 Elongator protein 3, MiaB family, Radical SAM KQ76_RS09010 SM00347 helix_turn_helix multiple antibiotic resistance protein KQ76_RS09055 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KQ76_RS09065 SM00047 Lysozyme subfamily 2 KQ76_RS09150 SM01234 KQ76_RS09150 KQ76_RS09170 SM00894 Excalibur calcium-binding domain KQ76_RS09195 SM00901 KQ76_RS09195 KQ76_RS09305 SM00974 KQ76_RS09305 KQ76_RS09430 SM00382 ATPases associated with a variety of cellular activities KQ76_RS09455 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KQ76_RS09485 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS09490 SM00421 helix_turn_helix, Lux Regulon KQ76_RS09490 SM00448 cheY-homologous receiver domain KQ76_RS09540 SM00382 ATPases associated with a variety of cellular activities KQ76_RS09545 SM00062 Bacterial periplasmic substrate-binding proteins KQ76_RS09735 SM00382 ATPases associated with a variety of cellular activities KQ76_RS09745 SM00478 endonuclease III KQ76_RS09815 SM00226 Low molecular weight phosphatase family KQ76_RS09830 SM00421 helix_turn_helix, Lux Regulon KQ76_RS09830 SM00448 cheY-homologous receiver domain KQ76_RS09835 SM00387 Histidine kinase-like ATPases KQ76_RS09900 SM00479 KQ76_RS09900 KQ76_RS09920 SM00046 Diacylglycerol kinase catalytic domain (presumed) KQ76_RS09930 SM00845 GatB domain KQ76_RS09955 SM00278 Helix-hairpin-helix DNA-binding motif class 1 KQ76_RS09955 SM00292 breast cancer carboxy-terminal domain KQ76_RS09955 SM00532 Ligase N family KQ76_RS09975 SM00998 Adenylosuccinate lyase C-terminus KQ76_RS10030 SM00710 Parallel beta-helix repeats KQ76_RS10040 SM01131 KQ76_RS10040 KQ76_RS10100 SM00382 ATPases associated with a variety of cellular activities KQ76_RS10110 SM00382 ATPases associated with a variety of cellular activities KQ76_RS10115 SM00345 helix_turn_helix gluconate operon transcriptional repressor KQ76_RS10255 SM00942 Primase C terminal 1 (PriCT-1) KQ76_RS10275 SM01040 BRO family, N-terminal domain KQ76_RS10280 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS10285 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS10300 SM00883 Chaperonin 10 Kd subunit KQ76_RS10330 SM00793 Accessory gene regulator B KQ76_RS10335 SM00794 Staphylococcal AgrD protein KQ76_RS10345 SM00448 cheY-homologous receiver domain KQ76_RS10345 SM00850 LytTr DNA-binding domain KQ76_RS10355 SM00640 Glycosyl hydrolases family 32 KQ76_RS10360 SM00354 helix_turn _helix lactose operon repressor KQ76_RS10380 SM00881 CoA binding domain KQ76_RS10385 SM00382 ATPases associated with a variety of cellular activities KQ76_RS10395 SM00534 ATPase domain of DNA mismatch repair MUTS family KQ76_RS10445 SM00917 LeuA allosteric (dimerisation) domain KQ76_RS10450 SM01329 KQ76_RS10450 KQ76_RS10500 SM00731 SprT homologues. KQ76_RS10505 SM00316 Ribosomal protein S1-like RNA-binding domain KQ76_RS10505 SM00732 Likely ribonuclease with RNase H fold. KQ76_RS10525 SM00331 Sigma factor PP2C-like phosphatases KQ76_RS10525 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain KQ76_RS10545 SM01005 Alanine racemase, C-terminal domain KQ76_RS10590 SM00387 Histidine kinase-like ATPases KQ76_RS10590 SM00388 His Kinase A (phosphoacceptor) domain KQ76_RS10595 SM00448 cheY-homologous receiver domain KQ76_RS10595 SM00862 Transcriptional regulatory protein, C terminal KQ76_RS10600 SM00487 DEAD-like helicases superfamily KQ76_RS10600 SM00490 helicase superfamily c-terminal domain KQ76_RS10640 SM00155 Phospholipase D. Active site motifs. KQ76_RS10645 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. KQ76_RS10725 SM00382 ATPases associated with a variety of cellular activities KQ76_RS10785 SM00226 Low molecular weight phosphatase family KQ76_RS10800 SM00937 KQ76_RS10800 KQ76_RS10820 SM00357 Cold shock protein domain KQ76_RS10820 SM00382 ATPases associated with a variety of cellular activities KQ76_RS10820 SM00959 Rho termination factor, N-terminal domain KQ76_RS10895 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain KQ76_RS10905 SM01133 KQ76_RS10905 KQ76_RS10945 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor KQ76_RS10970 SM00382 ATPases associated with a variety of cellular activities KQ76_RS11180 SM00829 Enoylreductase KQ76_RS11185 SM00829 Enoylreductase KQ76_RS11210 SM01133 KQ76_RS11210 KQ76_RS11230 SM00420 helix_turn_helix, Deoxyribose operon repressor KQ76_RS11230 SM01134 KQ76_RS11230 KQ76_RS11265 SM00422 helix_turn_helix, mercury resistance KQ76_RS11340 SM00382 ATPases associated with a variety of cellular activities KQ76_RS11345 SM00382 ATPases associated with a variety of cellular activities KQ76_RS11355 SM00662 RNA polymerases D KQ76_RS11375 SM00316 Ribosomal protein S1-like RNA-binding domain KQ76_RS11430 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. KQ76_RS11435 SM01374 KQ76_RS11435 KQ76_RS11455 SM00322 K homology RNA-binding domain KQ76_RS11470 SM01382 KQ76_RS11470 KQ76_RS11470 SM01383 KQ76_RS11470 KQ76_RS11490 SM01403 KQ76_RS11490 KQ76_RS11505 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain KQ76_RS11505 SM00437 Bacterial DNA topoisomerase I DNA-binding domain KQ76_RS11505 SM00493 KQ76_RS11505 KQ76_RS11560 SM00347 helix_turn_helix multiple antibiotic resistance protein KQ76_RS11585 SM00729 Elongator protein 3, MiaB family, Radical SAM KQ76_RS11610 SM00852 Probable molybdopterin binding domain KQ76_RS11620 SM00852 Probable molybdopterin binding domain KQ76_RS11630 SM00382 ATPases associated with a variety of cellular activities KQ76_RS11695 SM00988 UreE urease accessory protein, N-terminal domain KQ76_RS11735 SM00342 helix_turn_helix, arabinose operon control protein KQ76_RS11805 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KQ76_RS11805 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KQ76_RS11820 SM00420 helix_turn_helix, Deoxyribose operon repressor KQ76_RS11970 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12060 SM00347 helix_turn_helix multiple antibiotic resistance protein KQ76_RS12070 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12080 SM00448 cheY-homologous receiver domain KQ76_RS12080 SM00862 Transcriptional regulatory protein, C terminal KQ76_RS12085 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain KQ76_RS12085 SM00387 Histidine kinase-like ATPases KQ76_RS12085 SM00388 His Kinase A (phosphoacceptor) domain KQ76_RS12090 SM00850 LytTr DNA-binding domain KQ76_RS12105 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12140 SM00829 Enoylreductase KQ76_RS12195 SM00342 helix_turn_helix, arabinose operon control protein KQ76_RS12220 SM00347 helix_turn_helix multiple antibiotic resistance protein KQ76_RS12240 SM00422 helix_turn_helix, mercury resistance KQ76_RS12245 SM00421 helix_turn_helix, Lux Regulon KQ76_RS12245 SM00448 cheY-homologous receiver domain KQ76_RS12250 SM00387 Histidine kinase-like ATPases KQ76_RS12275 SM00926 Molybdopterin oxidoreductase Fe4S4 domain KQ76_RS12355 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12365 SM00062 Bacterial periplasmic substrate-binding proteins KQ76_RS12365 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. KQ76_RS12380 SM00855 Phosphoglycerate mutase family KQ76_RS12435 SM00729 Elongator protein 3, MiaB family, Radical SAM KQ76_RS12435 SM00876 Biotin and Thiamin Synthesis associated domain KQ76_RS12460 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12465 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12500 SM00871 Bacterial transcription activator, effector binding domain KQ76_RS12580 SM00116 Domain in cystathionine beta-synthase and other proteins. KQ76_RS12580 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12620 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12665 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12670 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12795 SM00487 DEAD-like helicases superfamily KQ76_RS12795 SM00490 helicase superfamily c-terminal domain KQ76_RS12855 SM00345 helix_turn_helix gluconate operon transcriptional repressor KQ76_RS12855 SM00895 KQ76_RS12855 KQ76_RS12860 SM00422 helix_turn_helix, mercury resistance KQ76_RS12865 SM00954 Region found in RelA / SpoT proteins KQ76_RS12900 SM00345 helix_turn_helix gluconate operon transcriptional repressor KQ76_RS12905 SM00382 ATPases associated with a variety of cellular activities KQ76_RS12935 SM00347 helix_turn_helix multiple antibiotic resistance protein KQ76_RS13085 SM00382 ATPases associated with a variety of cellular activities KQ76_RS13085 SM01086 C-terminal, D2-small domain, of ClpB protein KQ76_RS13100 SM00899 KQ76_RS13100 KQ76_RS13125 SM01266 KQ76_RS13125 KQ76_RS13320 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain KQ76_RS13500 SM00382 ATPases associated with a variety of cellular activities KQ76_RS13505 SM00387 Histidine kinase-like ATPases KQ76_RS13510 SM00448 cheY-homologous receiver domain KQ76_RS13510 SM00862 Transcriptional regulatory protein, C terminal KQ76_RS13525 SM00098 Alkaline phosphatase homologues KQ76_RS13530 SM00347 helix_turn_helix multiple antibiotic resistance protein KQ76_RS13615 SM00047 Lysozyme subfamily 2 KQ76_RS13640 SM00957 SecA DEAD-like domain KQ76_RS13640 SM00958 SecA preprotein cross-linking domain KQ76_RS13670 SM00903 Flavin reductase like domain KQ76_RS13695 SM00903 Flavin reductase like domain KQ76_RS13820 SM00382 ATPases associated with a variety of cellular activities KQ76_RS13835 SM00867 YceI-like domain KQ76_RS13845 SM00450 Rhodanese Homology Domain KQ76_RS13895 SM00382 ATPases associated with a variety of cellular activities KQ76_RS13930 SM00357 Cold shock protein domain KQ76_RS13935 SM00530 Helix-turn-helix XRE-family like proteins KQ76_RS13955 SM00470 ParB-like nuclease domain KQ76_RS13965 SM01228 KQ76_RS13965