CFN12_RS00040	PWY-5028	L-histidine degradation II
CFN12_RS00040	PWY-5030	L-histidine degradation III
CFN12_RS00050	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CFN12_RS00065	PWY-5344	L-homocysteine biosynthesis
CFN12_RS00075	PWY-7805	CFN12_RS00075
CFN12_RS00075	PWY-7807	CFN12_RS00075
CFN12_RS00095	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS00140	PWY-6825	phosphatidylcholine biosynthesis V
CFN12_RS00410	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CFN12_RS00445	PWY-6854	ethylene biosynthesis III (microbes)
CFN12_RS00465	PWY-4202	arsenate detoxification I (glutaredoxin)
CFN12_RS00465	PWY-5532	adenosine nucleotides degradation IV
CFN12_RS00465	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CFN12_RS00465	PWY-6608	guanosine nucleotides degradation III
CFN12_RS00465	PWY-6609	adenine and adenosine salvage III
CFN12_RS00465	PWY-6611	adenine and adenosine salvage V
CFN12_RS00465	PWY-6620	guanine and guanosine salvage
CFN12_RS00465	PWY-6627	salinosporamide A biosynthesis
CFN12_RS00465	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
CFN12_RS00465	PWY-7179	purine deoxyribonucleosides degradation I
CFN12_RS00465	PWY-7179-1	purine deoxyribonucleosides degradation
CFN12_RS00475	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
CFN12_RS00480	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
CFN12_RS00540	PWY-3162	L-tryptophan degradation V (side chain pathway)
CFN12_RS00540	PWY-5057	L-valine degradation II
CFN12_RS00540	PWY-5076	L-leucine degradation III
CFN12_RS00540	PWY-5078	L-isoleucine degradation II
CFN12_RS00540	PWY-5079	L-phenylalanine degradation III
CFN12_RS00540	PWY-5082	L-methionine degradation III
CFN12_RS00540	PWY-5480	pyruvate fermentation to ethanol I
CFN12_RS00540	PWY-5486	pyruvate fermentation to ethanol II
CFN12_RS00540	PWY-5751	phenylethanol biosynthesis
CFN12_RS00540	PWY-6313	serotonin degradation
CFN12_RS00540	PWY-6333	acetaldehyde biosynthesis I
CFN12_RS00540	PWY-6342	noradrenaline and adrenaline degradation
CFN12_RS00540	PWY-6587	pyruvate fermentation to ethanol III
CFN12_RS00540	PWY-6802	salidroside biosynthesis
CFN12_RS00540	PWY-6871	3-methylbutanol biosynthesis
CFN12_RS00540	PWY-7013	L-1,2-propanediol degradation
CFN12_RS00540	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFN12_RS00540	PWY-7118	chitin degradation to ethanol
CFN12_RS00540	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CFN12_RS00565	PWY-3821	galactose degradation III
CFN12_RS00565	PWY-6317	galactose degradation I (Leloir pathway)
CFN12_RS00565	PWY-6397	mycolyl-arabinogalactan-peptidoglycan complex biosynthesis
CFN12_RS00565	PWY-6527	stachyose degradation
CFN12_RS00565	PWY-7328	superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis
CFN12_RS00565	PWY-7344	UDP-D-galactose biosynthesis
CFN12_RS00680	PWY-1881	formate oxidation to CO<sub>2</sub>
CFN12_RS00680	PWY-5497	purine nucleobases degradation II (anaerobic)
CFN12_RS00680	PWY-6696	oxalate degradation III
CFN12_RS00695	PWY-6012	acyl carrier protein metabolism I
CFN12_RS00695	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CFN12_RS00705	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFN12_RS00705	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFN12_RS00710	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFN12_RS00715	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFN12_RS00715	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFN12_RS00720	PWY-3341	L-proline biosynthesis III
CFN12_RS00720	PWY-4981	L-proline biosynthesis II (from arginine)
CFN12_RS00720	PWY-6344	L-ornithine degradation II (Stickland reaction)
CFN12_RS00720	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CFN12_RS00815	PWY-4041	&gamma;-glutamyl cycle
CFN12_RS00815	PWY-5826	hypoglycin biosynthesis
CFN12_RS00895	PWY-5480	pyruvate fermentation to ethanol I
CFN12_RS00895	PWY-5485	pyruvate fermentation to acetate IV
CFN12_RS00895	PWY-5493	reductive monocarboxylic acid cycle
CFN12_RS00935	PWY-1361	benzoyl-CoA degradation I (aerobic)
CFN12_RS00935	PWY-5109	2-methylbutanoate biosynthesis
CFN12_RS00935	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CFN12_RS00935	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CFN12_RS00935	PWY-5177	glutaryl-CoA degradation
CFN12_RS00935	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CFN12_RS00935	PWY-6435	4-hydroxybenzoate biosynthesis V
CFN12_RS00935	PWY-6583	pyruvate fermentation to butanol I
CFN12_RS00935	PWY-6863	pyruvate fermentation to hexanol
CFN12_RS00935	PWY-6883	pyruvate fermentation to butanol II
CFN12_RS00935	PWY-6944	androstenedione degradation
CFN12_RS00935	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CFN12_RS00935	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CFN12_RS00935	PWY-7007	methyl ketone biosynthesis
CFN12_RS00935	PWY-7046	4-coumarate degradation (anaerobic)
CFN12_RS00935	PWY-7094	fatty acid salvage
CFN12_RS00935	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CFN12_RS00935	PWY-735	jasmonic acid biosynthesis
CFN12_RS00935	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CFN12_RS00935	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CFN12_RS00935	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CFN12_RS00935	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CFN12_RS00935	PWY-7726	CFN12_RS00935
CFN12_RS00935	PWY-7778	CFN12_RS00935
CFN12_RS00935	PWY-7779	CFN12_RS00935
CFN12_RS00935	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
CFN12_RS00990	PWY-5481	pyruvate fermentation to lactate
CFN12_RS00990	PWY-6901	superpathway of glucose and xylose degradation
CFN12_RS01050	PWY-7560	methylerythritol phosphate pathway II
CFN12_RS01070	PWY-7560	methylerythritol phosphate pathway II
CFN12_RS01425	PWY-6019	pseudouridine degradation
CFN12_RS01440	PWY-2941	L-lysine biosynthesis II
CFN12_RS01440	PWY-2942	L-lysine biosynthesis III
CFN12_RS01440	PWY-5097	L-lysine biosynthesis VI
CFN12_RS01440	PWY-7581	<i>N</i>-acetylneuraminate and <i>N</i>-acetylmannosamine degradation II
CFN12_RS01650	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CFN12_RS01650	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CFN12_RS01650	PWY-7717	CFN12_RS01650
CFN12_RS01650	PWY-7733	CFN12_RS01650
CFN12_RS01650	PWY-7734	CFN12_RS01650
CFN12_RS01650	PWY-7765	CFN12_RS01650
CFN12_RS01655	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CFN12_RS01655	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CFN12_RS01655	PWY-6936	seleno-amino acid biosynthesis
CFN12_RS01655	PWY-702	L-methionine biosynthesis II
CFN12_RS01660	PWY-2201	folate transformations I
CFN12_RS01660	PWY-3841	folate transformations II
CFN12_RS01845	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CFN12_RS01845	PWY-6596	adenosine nucleotides degradation I
CFN12_RS01845	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS01850	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS02190	PWY-6619	adenine and adenosine salvage VI
CFN12_RS02265	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFN12_RS02265	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFN12_RS02265	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFN12_RS02265	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CFN12_RS02265	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFN12_RS02265	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFN12_RS02300	PWY-2201	folate transformations I
CFN12_RS02330	PWY-7560	methylerythritol phosphate pathway II
CFN12_RS02355	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CFN12_RS02355	PWY-5667	CDP-diacylglycerol biosynthesis I
CFN12_RS02355	PWY-6453	stigma estolide biosynthesis
CFN12_RS02355	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CFN12_RS02355	PWY-7587	oleate biosynthesis III (cyanobacteria)
CFN12_RS02375	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CFN12_RS02415	PWY-6599	guanine and guanosine salvage II
CFN12_RS02415	PWY-6609	adenine and adenosine salvage III
CFN12_RS02415	PWY-6610	adenine and adenosine salvage IV
CFN12_RS02415	PWY-6620	guanine and guanosine salvage
CFN12_RS02430	PWY-6936	seleno-amino acid biosynthesis
CFN12_RS02435	PWY-6614	tetrahydrofolate biosynthesis
CFN12_RS02440	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CFN12_RS02440	PWY-6148	tetrahydromethanopterin biosynthesis
CFN12_RS02440	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CFN12_RS02440	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CFN12_RS02445	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CFN12_RS02445	PWY-6148	tetrahydromethanopterin biosynthesis
CFN12_RS02445	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CFN12_RS02445	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CFN12_RS02445	PWY-7852	CFN12_RS02445
CFN12_RS02445	PWY-7853	CFN12_RS02445
CFN12_RS02545	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
CFN12_RS02550	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
CFN12_RS02590	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFN12_RS02600	PWY-6936	seleno-amino acid biosynthesis
CFN12_RS02600	PWY-7274	D-cycloserine biosynthesis
CFN12_RS02725	PWY-4261	glycerol degradation I
CFN12_RS02735	PWY-5057	L-valine degradation II
CFN12_RS02735	PWY-5076	L-leucine degradation III
CFN12_RS02735	PWY-5078	L-isoleucine degradation II
CFN12_RS02735	PWY-5101	L-isoleucine biosynthesis II
CFN12_RS02735	PWY-5103	L-isoleucine biosynthesis III
CFN12_RS02735	PWY-5104	L-isoleucine biosynthesis IV
CFN12_RS02735	PWY-5108	L-isoleucine biosynthesis V
CFN12_RS02735	PWY-7767	CFN12_RS02735
CFN12_RS02805	PWY-5663	tetrahydrobiopterin biosynthesis I
CFN12_RS02805	PWY-5664	tetrahydrobiopterin biosynthesis II
CFN12_RS02805	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CFN12_RS02805	PWY-6703	preQ<sub>0</sub> biosynthesis
CFN12_RS02805	PWY-6983	tetrahydrobiopterin biosynthesis III
CFN12_RS02805	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CFN12_RS02805	PWY-7852	CFN12_RS02805
CFN12_RS02820	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CFN12_RS02820	PWY-6855	chitin degradation I (archaea)
CFN12_RS02820	PWY-6906	chitin derivatives degradation
CFN12_RS02825	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFN12_RS02825	PWY-5686	UMP biosynthesis
CFN12_RS02825	PWY-7790	CFN12_RS02825
CFN12_RS02825	PWY-7791	CFN12_RS02825
CFN12_RS02825	PWY-7796	CFN12_RS02825
CFN12_RS02875	PWY-6910	hydroxymethylpyrimidine salvage
CFN12_RS02875	PWY-7356	thiamin salvage IV (yeast)
CFN12_RS02875	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFN12_RS02920	PWY-1281	sulfoacetaldehyde degradation I
CFN12_RS02920	PWY-5482	pyruvate fermentation to acetate II
CFN12_RS02920	PWY-5485	pyruvate fermentation to acetate IV
CFN12_RS02920	PWY-5497	purine nucleobases degradation II (anaerobic)
CFN12_RS02920	PWY-6637	sulfolactate degradation II
CFN12_RS02925	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CFN12_RS02930	PWY-6174	mevalonate pathway II (archaea)
CFN12_RS02930	PWY-7391	isoprene biosynthesis II (engineered)
CFN12_RS02930	PWY-922	mevalonate pathway I
CFN12_RS02935	PWY-7391	isoprene biosynthesis II (engineered)
CFN12_RS02935	PWY-922	mevalonate pathway I
CFN12_RS02940	PWY-7391	isoprene biosynthesis II (engineered)
CFN12_RS02940	PWY-922	mevalonate pathway I
CFN12_RS03225	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CFN12_RS03225	PWY-622	starch biosynthesis
CFN12_RS03225	PWY-7815	CFN12_RS03225
CFN12_RS03225	PWY-7816	CFN12_RS03225
CFN12_RS03225	PWY-7819	CFN12_RS03225
CFN12_RS03255	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFN12_RS03255	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFN12_RS03470	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CFN12_RS03555	PWY-6619	adenine and adenosine salvage VI
CFN12_RS03560	PWY-6906	chitin derivatives degradation
CFN12_RS03560	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CFN12_RS03560	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CFN12_RS03605	PWY-6703	preQ<sub>0</sub> biosynthesis
CFN12_RS03615	PWY-6703	preQ<sub>0</sub> biosynthesis
CFN12_RS03620	PWY-5958	acridone alkaloid biosynthesis
CFN12_RS03620	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFN12_RS03620	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFN12_RS03625	PWY-5958	acridone alkaloid biosynthesis
CFN12_RS03625	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFN12_RS03625	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFN12_RS03710	PWY-6700	queuosine biosynthesis
CFN12_RS03730	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFN12_RS03730	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFN12_RS03730	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFN12_RS03730	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFN12_RS03730	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFN12_RS03730	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFN12_RS03730	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFN12_RS03730	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CFN12_RS03735	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFN12_RS03735	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFN12_RS03735	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFN12_RS03735	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFN12_RS03735	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFN12_RS03735	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFN12_RS03735	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFN12_RS03735	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CFN12_RS03775	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFN12_RS03775	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFN12_RS03820	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFN12_RS03820	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFN12_RS03820	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFN12_RS03965	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS03965	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS03965	PWY-6901	superpathway of glucose and xylose degradation
CFN12_RS03965	PWY-7003	glycerol degradation to butanol
CFN12_RS03970	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS03970	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS03970	PWY-6886	1-butanol autotrophic biosynthesis
CFN12_RS03970	PWY-6901	superpathway of glucose and xylose degradation
CFN12_RS03970	PWY-7003	glycerol degradation to butanol
CFN12_RS03975	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS03975	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS03975	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFN12_RS03975	PWY-7003	glycerol degradation to butanol
CFN12_RS03980	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS03980	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFN12_RS03980	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS03980	PWY-5723	Rubisco shunt
CFN12_RS03980	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFN12_RS03980	PWY-6886	1-butanol autotrophic biosynthesis
CFN12_RS03980	PWY-6901	superpathway of glucose and xylose degradation
CFN12_RS03980	PWY-7003	glycerol degradation to butanol
CFN12_RS03980	PWY-7124	ethylene biosynthesis V (engineered)
CFN12_RS03980	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFN12_RS03985	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS03985	PWY-1622	formaldehyde assimilation I (serine pathway)
CFN12_RS03985	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFN12_RS03985	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS03985	PWY-5723	Rubisco shunt
CFN12_RS03985	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFN12_RS03985	PWY-6886	1-butanol autotrophic biosynthesis
CFN12_RS03985	PWY-6901	superpathway of glucose and xylose degradation
CFN12_RS03985	PWY-7003	glycerol degradation to butanol
CFN12_RS03985	PWY-7124	ethylene biosynthesis V (engineered)
CFN12_RS03985	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFN12_RS04140	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFN12_RS04140	PWY-6416	quinate degradation II
CFN12_RS04140	PWY-6707	gallate biosynthesis
CFN12_RS04225	PWY-6823	molybdenum cofactor biosynthesis
CFN12_RS04225	PWY-6891	thiazole biosynthesis II (Bacillus)
CFN12_RS04225	PWY-6892	thiazole biosynthesis I (E. coli)
CFN12_RS04225	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CFN12_RS04260	PWY-723	alkylnitronates degradation
CFN12_RS04285	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CFN12_RS04285	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CFN12_RS04450	PWY-3341	L-proline biosynthesis III
CFN12_RS04450	PWY-4981	L-proline biosynthesis II (from arginine)
CFN12_RS04450	PWY-6344	L-ornithine degradation II (Stickland reaction)
CFN12_RS04450	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CFN12_RS04470	PWY-4983	L-citrulline-nitric oxide cycle
CFN12_RS04470	PWY-4984	urea cycle
CFN12_RS04470	PWY-5	canavanine biosynthesis
CFN12_RS04470	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFN12_RS04470	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFN12_RS04475	PWY-4983	L-citrulline-nitric oxide cycle
CFN12_RS04475	PWY-4984	urea cycle
CFN12_RS04475	PWY-5	canavanine biosynthesis
CFN12_RS04475	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFN12_RS04475	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFN12_RS04480	PWY-3801	sucrose degradation II (sucrose synthase)
CFN12_RS04480	PWY-5054	sorbitol biosynthesis I
CFN12_RS04480	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CFN12_RS04480	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CFN12_RS04480	PWY-5659	GDP-mannose biosynthesis
CFN12_RS04480	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFN12_RS04480	PWY-621	sucrose degradation III (sucrose invertase)
CFN12_RS04480	PWY-622	starch biosynthesis
CFN12_RS04480	PWY-6981	chitin biosynthesis
CFN12_RS04480	PWY-6992	1,5-anhydrofructose degradation
CFN12_RS04480	PWY-7238	sucrose biosynthesis II
CFN12_RS04480	PWY-7347	sucrose biosynthesis III
CFN12_RS04480	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFN12_RS04550	PWY-6871	3-methylbutanol biosynthesis
CFN12_RS04580	PWY-4381	fatty acid biosynthesis initiation I
CFN12_RS04700	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CFN12_RS04700	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFN12_RS04700	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CFN12_RS04720	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFN12_RS04720	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFN12_RS04720	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFN12_RS04720	PWY-6113	superpathway of mycolate biosynthesis
CFN12_RS04720	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFN12_RS04720	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFN12_RS04720	PWY-7663	gondoate biosynthesis (anaerobic)
CFN12_RS04720	PWY-7664	oleate biosynthesis IV (anaerobic)
CFN12_RS04720	PWY-7858	CFN12_RS04720
CFN12_RS04720	PWYG-321	mycolate biosynthesis
CFN12_RS04750	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFN12_RS04750	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CFN12_RS04750	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFN12_RS04750	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFN12_RS04750	PWY-6778	laminaribiose degradation
CFN12_RS04750	PWY-7817	CFN12_RS04750
CFN12_RS04895	PWY-5839	menaquinol-7 biosynthesis
CFN12_RS04895	PWY-5851	demethylmenaquinol-9 biosynthesis
CFN12_RS04895	PWY-5852	demethylmenaquinol-8 biosynthesis I
CFN12_RS04895	PWY-5853	demethylmenaquinol-6 biosynthesis I
CFN12_RS04895	PWY-5890	menaquinol-10 biosynthesis
CFN12_RS04895	PWY-5891	menaquinol-11 biosynthesis
CFN12_RS04895	PWY-5892	menaquinol-12 biosynthesis
CFN12_RS04895	PWY-5895	menaquinol-13 biosynthesis
CFN12_RS04905	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFN12_RS04905	PWY-5901	2,3-dihydroxybenzoate biosynthesis
CFN12_RS04905	PWY-6406	salicylate biosynthesis I
CFN12_RS04910	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFN12_RS04915	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFN12_RS04920	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFN12_RS04995	PWY-3781	aerobic respiration I (cytochrome c)
CFN12_RS04995	PWY-4521	arsenite oxidation I (respiratory)
CFN12_RS04995	PWY-6692	Fe(II) oxidation
CFN12_RS04995	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFN12_RS05020	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CFN12_RS05020	PWY-2201	folate transformations I
CFN12_RS05020	PWY-3841	folate transformations II
CFN12_RS05020	PWY-5030	L-histidine degradation III
CFN12_RS05020	PWY-5497	purine nucleobases degradation II (anaerobic)
CFN12_RS05020	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CFN12_RS05025	PWY-6123	inosine-5'-phosphate biosynthesis I
CFN12_RS05025	PWY-7234	inosine-5'-phosphate biosynthesis III
CFN12_RS05035	PWY-6123	inosine-5'-phosphate biosynthesis I
CFN12_RS05035	PWY-6124	inosine-5'-phosphate biosynthesis II
CFN12_RS05035	PWY-7234	inosine-5'-phosphate biosynthesis III
CFN12_RS05040	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFN12_RS05040	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFN12_RS05040	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFN12_RS05045	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFN12_RS05045	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFN12_RS05045	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFN12_RS05050	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFN12_RS05050	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFN12_RS05050	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFN12_RS05055	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFN12_RS05055	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFN12_RS05055	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFN12_RS05055	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CFN12_RS05060	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFN12_RS05060	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFN12_RS05060	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFN12_RS05065	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFN12_RS05065	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CFN12_RS05070	PWY-6123	inosine-5'-phosphate biosynthesis I
CFN12_RS05070	PWY-6124	inosine-5'-phosphate biosynthesis II
CFN12_RS05070	PWY-7234	inosine-5'-phosphate biosynthesis III
CFN12_RS05075	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFN12_RS05075	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFN12_RS05075	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFN12_RS05195	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CFN12_RS05195	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CFN12_RS05285	PWY-5750	itaconate biosynthesis
CFN12_RS05285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFN12_RS05285	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
CFN12_RS05340	PWY-7851	CFN12_RS05340
CFN12_RS05805	PWY-3781	aerobic respiration I (cytochrome c)
CFN12_RS05805	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CFN12_RS05805	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFN12_RS05805	PWY-5690	TCA cycle II (plants and fungi)
CFN12_RS05805	PWY-6728	methylaspartate cycle
CFN12_RS05805	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFN12_RS05805	PWY-7254	TCA cycle VII (acetate-producers)
CFN12_RS05805	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFN12_RS05810	PWY-3781	aerobic respiration I (cytochrome c)
CFN12_RS05810	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CFN12_RS05810	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFN12_RS05810	PWY-5690	TCA cycle II (plants and fungi)
CFN12_RS05810	PWY-6728	methylaspartate cycle
CFN12_RS05810	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFN12_RS05810	PWY-7254	TCA cycle VII (acetate-producers)
CFN12_RS05810	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFN12_RS05815	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFN12_RS05815	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFN12_RS05915	PWY-4981	L-proline biosynthesis II (from arginine)
CFN12_RS05915	PWY-4984	urea cycle
CFN12_RS05915	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFN12_RS05980	PWY-2201	folate transformations I
CFN12_RS05995	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFN12_RS05995	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFN12_RS05995	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFN12_RS06000	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFN12_RS06000	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFN12_RS06025	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFN12_RS06080	PWY-7183	pyrimidine nucleobases salvage I
CFN12_RS06090	PWY-5686	UMP biosynthesis
CFN12_RS06090	PWY-7790	CFN12_RS06090
CFN12_RS06090	PWY-7791	CFN12_RS06090
CFN12_RS06095	PWY-5686	UMP biosynthesis
CFN12_RS06095	PWY-7790	CFN12_RS06095
CFN12_RS06095	PWY-7791	CFN12_RS06095
CFN12_RS06100	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFN12_RS06100	PWY-5686	UMP biosynthesis
CFN12_RS06100	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFN12_RS06100	PWY-7790	CFN12_RS06100
CFN12_RS06100	PWY-7791	CFN12_RS06100
CFN12_RS06105	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFN12_RS06105	PWY-5686	UMP biosynthesis
CFN12_RS06105	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFN12_RS06105	PWY-7790	CFN12_RS06105
CFN12_RS06105	PWY-7791	CFN12_RS06105
CFN12_RS06110	PWY-5686	UMP biosynthesis
CFN12_RS06110	PWY-7790	CFN12_RS06110
CFN12_RS06110	PWY-7791	CFN12_RS06110
CFN12_RS06115	PWY-5686	UMP biosynthesis
CFN12_RS06115	PWY-7790	CFN12_RS06115
CFN12_RS06115	PWY-7791	CFN12_RS06115
CFN12_RS06135	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS06145	PWY-7851	CFN12_RS06145
CFN12_RS06175	PWY-6825	phosphatidylcholine biosynthesis V
CFN12_RS06180	PWY-2201	folate transformations I
CFN12_RS06200	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFN12_RS06200	PWY-5723	Rubisco shunt
CFN12_RS06205	PWY-6898	thiamin salvage III
CFN12_RS06205	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CFN12_RS06205	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CFN12_RS06205	PWY-7356	thiamin salvage IV (yeast)
CFN12_RS06240	PWY-4381	fatty acid biosynthesis initiation I
CFN12_RS06240	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CFN12_RS06240	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFN12_RS06245	PWY-5367	petroselinate biosynthesis
CFN12_RS06245	PWY-5515	L-arabinose degradation II
CFN12_RS06245	PWY-5525	D-glucuronate degradation I
CFN12_RS06245	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFN12_RS06245	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFN12_RS06245	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFN12_RS06245	PWY-5994	palmitate biosynthesis I (animals and fungi)
CFN12_RS06245	PWY-6113	superpathway of mycolate biosynthesis
CFN12_RS06245	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFN12_RS06245	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFN12_RS06245	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFN12_RS06245	PWY-7663	gondoate biosynthesis (anaerobic)
CFN12_RS06245	PWY-7664	oleate biosynthesis IV (anaerobic)
CFN12_RS06245	PWY-7858	CFN12_RS06245
CFN12_RS06245	PWYG-321	mycolate biosynthesis
CFN12_RS06295	PWY-6829	tRNA methylation (yeast)
CFN12_RS06295	PWY-7285	methylwyosine biosynthesis
CFN12_RS06295	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CFN12_RS06320	PWY-5392	reductive TCA cycle II
CFN12_RS06320	PWY-5537	pyruvate fermentation to acetate V
CFN12_RS06320	PWY-5538	pyruvate fermentation to acetate VI
CFN12_RS06320	PWY-5690	TCA cycle II (plants and fungi)
CFN12_RS06320	PWY-5913	TCA cycle VI (obligate autotrophs)
CFN12_RS06320	PWY-6728	methylaspartate cycle
CFN12_RS06320	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFN12_RS06320	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CFN12_RS06325	PWY-5392	reductive TCA cycle II
CFN12_RS06325	PWY-5537	pyruvate fermentation to acetate V
CFN12_RS06325	PWY-5538	pyruvate fermentation to acetate VI
CFN12_RS06325	PWY-5690	TCA cycle II (plants and fungi)
CFN12_RS06325	PWY-5913	TCA cycle VI (obligate autotrophs)
CFN12_RS06325	PWY-6728	methylaspartate cycle
CFN12_RS06325	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFN12_RS06325	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CFN12_RS06410	PWY-5667	CDP-diacylglycerol biosynthesis I
CFN12_RS06410	PWY-5981	CDP-diacylglycerol biosynthesis III
CFN12_RS06410	PWY-7817	CFN12_RS06410
CFN12_RS06470	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CFN12_RS06470	PWY-6167	flavin biosynthesis II (archaea)
CFN12_RS06470	PWY-6168	flavin biosynthesis III (fungi)
CFN12_RS06470	PWY-7863	CFN12_RS06470
CFN12_RS06530	PWY-5269	cardiolipin biosynthesis II
CFN12_RS06530	PWY-5668	cardiolipin biosynthesis I
CFN12_RS06530	PWY-7817	CFN12_RS06530
CFN12_RS06560	PWY-5392	reductive TCA cycle II
CFN12_RS06560	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFN12_RS06610	PWY-4261	glycerol degradation I
CFN12_RS06615	PWY-4261	glycerol degradation I
CFN12_RS06615	PWY-6118	glycerol-3-phosphate shuttle
CFN12_RS06615	PWY-6952	glycerophosphodiester degradation
CFN12_RS06625	PWY-2781	<i>cis</i>-zeatin biosynthesis
CFN12_RS06655	PWY-381	nitrate reduction II (assimilatory)
CFN12_RS06655	PWY-5675	nitrate reduction V (assimilatory)
CFN12_RS06655	PWY-6549	L-glutamine biosynthesis III
CFN12_RS06655	PWY-6963	ammonia assimilation cycle I
CFN12_RS06655	PWY-6964	ammonia assimilation cycle II
CFN12_RS06785	PWY-2941	L-lysine biosynthesis II
CFN12_RS06785	PWY-2942	L-lysine biosynthesis III
CFN12_RS06785	PWY-5097	L-lysine biosynthesis VI
CFN12_RS06785	PWY-6559	spermidine biosynthesis II
CFN12_RS06785	PWY-6562	norspermidine biosynthesis
CFN12_RS06785	PWY-7153	grixazone biosynthesis
CFN12_RS06800	PWY-702	L-methionine biosynthesis II
CFN12_RS06870	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFN12_RS06870	PWY-5723	Rubisco shunt
CFN12_RS06870	PWY-6891	thiazole biosynthesis II (Bacillus)
CFN12_RS06870	PWY-6892	thiazole biosynthesis I (E. coli)
CFN12_RS06870	PWY-6901	superpathway of glucose and xylose degradation
CFN12_RS06870	PWY-7560	methylerythritol phosphate pathway II
CFN12_RS07005	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CFN12_RS07015	PWY-5958	acridone alkaloid biosynthesis
CFN12_RS07015	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFN12_RS07015	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFN12_RS07020	PWY-5958	acridone alkaloid biosynthesis
CFN12_RS07020	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFN12_RS07020	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFN12_RS07145	PWY-2941	L-lysine biosynthesis II
CFN12_RS07145	PWY-2942	L-lysine biosynthesis III
CFN12_RS07145	PWY-5097	L-lysine biosynthesis VI
CFN12_RS07145	PWY-6559	spermidine biosynthesis II
CFN12_RS07145	PWY-6562	norspermidine biosynthesis
CFN12_RS07145	PWY-7153	grixazone biosynthesis
CFN12_RS07150	PWY-2941	L-lysine biosynthesis II
CFN12_RS07150	PWY-2942	L-lysine biosynthesis III
CFN12_RS07150	PWY-5097	L-lysine biosynthesis VI
CFN12_RS07150	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFN12_RS07150	PWY-6559	spermidine biosynthesis II
CFN12_RS07150	PWY-6562	norspermidine biosynthesis
CFN12_RS07150	PWY-7153	grixazone biosynthesis
CFN12_RS07150	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFN12_RS07155	PWY-2941	L-lysine biosynthesis II
CFN12_RS07155	PWY-2942	L-lysine biosynthesis III
CFN12_RS07155	PWY-5097	L-lysine biosynthesis VI
CFN12_RS07160	PWY-2941	L-lysine biosynthesis II
CFN12_RS07160	PWY-2942	L-lysine biosynthesis III
CFN12_RS07160	PWY-5097	L-lysine biosynthesis VI
CFN12_RS07165	PWY-2941	L-lysine biosynthesis II
CFN12_RS07175	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFN12_RS07180	PWY-2941	L-lysine biosynthesis II
CFN12_RS07180	PWY-2942	L-lysine biosynthesis III
CFN12_RS07180	PWY-5097	L-lysine biosynthesis VI
CFN12_RS07250	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CFN12_RS07255	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CFN12_RS07290	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFN12_RS07290	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CFN12_RS07290	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFN12_RS07290	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFN12_RS07330	PWY-3841	folate transformations II
CFN12_RS07330	PWY-6614	tetrahydrofolate biosynthesis
CFN12_RS07335	PWY-3841	folate transformations II
CFN12_RS07335	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFN12_RS07335	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFN12_RS07335	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFN12_RS07335	PWY-7199	pyrimidine deoxyribonucleosides salvage
CFN12_RS07335	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFN12_RS07420	PWY-6825	phosphatidylcholine biosynthesis V
CFN12_RS07530	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFN12_RS07535	PWY-6164	3-dehydroquinate biosynthesis I
CFN12_RS07540	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFN12_RS07550	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFN12_RS07550	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CFN12_RS07550	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFN12_RS07550	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFN12_RS07550	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CFN12_RS07550	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFN12_RS07550	PWY-7205	CMP phosphorylation
CFN12_RS07550	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFN12_RS07550	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFN12_RS07550	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS07550	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFN12_RS07550	PWY-7224	purine deoxyribonucleosides salvage
CFN12_RS07550	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFN12_RS07550	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CFN12_RS07560	PWY-5839	menaquinol-7 biosynthesis
CFN12_RS07560	PWY-5844	menaquinol-9 biosynthesis
CFN12_RS07560	PWY-5849	menaquinol-6 biosynthesis
CFN12_RS07560	PWY-5890	menaquinol-10 biosynthesis
CFN12_RS07560	PWY-5891	menaquinol-11 biosynthesis
CFN12_RS07560	PWY-5892	menaquinol-12 biosynthesis
CFN12_RS07560	PWY-5895	menaquinol-13 biosynthesis
CFN12_RS07565	PWY-5807	heptaprenyl diphosphate biosynthesis
CFN12_RS07580	PWY-5667	CDP-diacylglycerol biosynthesis I
CFN12_RS07580	PWY-5981	CDP-diacylglycerol biosynthesis III
CFN12_RS07610	PWY-7205	CMP phosphorylation
CFN12_RS08165	PWY-3341	L-proline biosynthesis III
CFN12_RS08165	PWY-4981	L-proline biosynthesis II (from arginine)
CFN12_RS08165	PWY-6344	L-ornithine degradation II (Stickland reaction)
CFN12_RS08175	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFN12_RS08245	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CFN12_RS08245	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CFN12_RS08315	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CFN12_RS08315	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CFN12_RS08340	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFN12_RS08390	PWY-2722	trehalose degradation IV
CFN12_RS08390	PWY-2723	trehalose degradation V
CFN12_RS08390	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CFN12_RS08390	PWY-5661	GDP-glucose biosynthesis
CFN12_RS08390	PWY-621	sucrose degradation III (sucrose invertase)
CFN12_RS08390	PWY-7238	sucrose biosynthesis II
CFN12_RS08390	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFN12_RS08420	PWY-6854	ethylene biosynthesis III (microbes)
CFN12_RS08495	PWY-6556	pyrimidine ribonucleosides salvage II
CFN12_RS08495	PWY-7181	pyrimidine deoxyribonucleosides degradation
CFN12_RS08495	PWY-7193	pyrimidine ribonucleosides salvage I
CFN12_RS08495	PWY-7199	pyrimidine deoxyribonucleosides salvage
CFN12_RS08500	PWY-7039	phosphatidate metabolism, as a signaling molecule
CFN12_RS08500	PWY-7817	CFN12_RS08500
CFN12_RS08540	PWY-2201	folate transformations I
CFN12_RS08600	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFN12_RS08625	PWY-5381	pyridine nucleotide cycling (plants)
CFN12_RS08625	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CFN12_RS08625	PWY-7761	CFN12_RS08625
CFN12_RS08635	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFN12_RS08650	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CFN12_RS08650	PWY-6153	autoinducer AI-2 biosynthesis I
CFN12_RS08650	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CFN12_RS08705	PWY-7193	pyrimidine ribonucleosides salvage I
CFN12_RS08760	PWY-6823	molybdenum cofactor biosynthesis
CFN12_RS08760	PWY-6891	thiazole biosynthesis II (Bacillus)
CFN12_RS08760	PWY-6892	thiazole biosynthesis I (E. coli)
CFN12_RS08760	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CFN12_RS08830	PWY-6605	adenine and adenosine salvage II
CFN12_RS08830	PWY-6610	adenine and adenosine salvage IV
CFN12_RS08830	PWY-7805	CFN12_RS08830
CFN12_RS08830	PWY-7807	CFN12_RS08830
CFN12_RS08835	PWY-7805	CFN12_RS08835
CFN12_RS08835	PWY-7807	CFN12_RS08835
CFN12_RS08850	PWY-6700	queuosine biosynthesis
CFN12_RS08855	PWY-6700	queuosine biosynthesis
CFN12_RS08940	PWY-2161	folate polyglutamylation
CFN12_RS08965	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFN12_RS08970	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFN12_RS08970	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CFN12_RS08975	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFN12_RS08975	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CFN12_RS08980	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFN12_RS08980	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CFN12_RS08990	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFN12_RS09075	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS09075	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS09075	PWY-6901	superpathway of glucose and xylose degradation
CFN12_RS09075	PWY-7003	glycerol degradation to butanol
CFN12_RS09080	PWY-7851	CFN12_RS09080
CFN12_RS09115	PWY-5913	TCA cycle VI (obligate autotrophs)
CFN12_RS09115	PWY-6549	L-glutamine biosynthesis III
CFN12_RS09115	PWY-6728	methylaspartate cycle
CFN12_RS09115	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFN12_RS09115	PWY-7124	ethylene biosynthesis V (engineered)
CFN12_RS09115	PWY-7254	TCA cycle VII (acetate-producers)
CFN12_RS09115	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFN12_RS09135	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS09135	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFN12_RS09135	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS09135	PWY-5723	Rubisco shunt
CFN12_RS09135	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFN12_RS09135	PWY-6886	1-butanol autotrophic biosynthesis
CFN12_RS09135	PWY-6901	superpathway of glucose and xylose degradation
CFN12_RS09135	PWY-7003	glycerol degradation to butanol
CFN12_RS09135	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFN12_RS09135	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFN12_RS09140	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS09140	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFN12_RS09140	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS09140	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFN12_RS09145	PWY-6679	jadomycin biosynthesis
CFN12_RS09145	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFN12_RS09150	PWY-6679	jadomycin biosynthesis
CFN12_RS09150	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFN12_RS09165	PWY-7805	CFN12_RS09165
CFN12_RS09165	PWY-7807	CFN12_RS09165
CFN12_RS09175	PWY-1281	sulfoacetaldehyde degradation I
CFN12_RS09175	PWY-5482	pyruvate fermentation to acetate II
CFN12_RS09175	PWY-5485	pyruvate fermentation to acetate IV
CFN12_RS09175	PWY-5497	purine nucleobases degradation II (anaerobic)
CFN12_RS09175	PWY-6637	sulfolactate degradation II
CFN12_RS09210	PWY-5482	pyruvate fermentation to acetate II
CFN12_RS09210	PWY-5485	pyruvate fermentation to acetate IV
CFN12_RS09210	PWY-5497	purine nucleobases degradation II (anaerobic)
CFN12_RS09235	PWY-6823	molybdenum cofactor biosynthesis
CFN12_RS09235	PWY-6891	thiazole biosynthesis II (Bacillus)
CFN12_RS09235	PWY-6892	thiazole biosynthesis I (E. coli)
CFN12_RS09235	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CFN12_RS09280	PWY-6832	2-aminoethylphosphonate degradation II
CFN12_RS09340	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CFN12_RS09340	PWY-2161	folate polyglutamylation
CFN12_RS09340	PWY-2201	folate transformations I
CFN12_RS09340	PWY-3841	folate transformations II
CFN12_RS09370	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CFN12_RS09370	PWY-3461	L-tyrosine biosynthesis II
CFN12_RS09370	PWY-3462	L-phenylalanine biosynthesis II
CFN12_RS09370	PWY-6120	L-tyrosine biosynthesis III
CFN12_RS09370	PWY-6164	3-dehydroquinate biosynthesis I
CFN12_RS09370	PWY-6627	salinosporamide A biosynthesis
CFN12_RS09370	PWY-7626	bacilysin biosynthesis
CFN12_RS09370	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CFN12_RS09390	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFN12_RS09390	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFN12_RS09525	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CFN12_RS09525	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CFN12_RS09530	PWY-6167	flavin biosynthesis II (archaea)
CFN12_RS09530	PWY-6168	flavin biosynthesis III (fungi)
CFN12_RS09535	PWY-6167	flavin biosynthesis II (archaea)
CFN12_RS09535	PWY-6168	flavin biosynthesis III (fungi)
CFN12_RS09535	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CFN12_RS09540	PWY-6167	flavin biosynthesis II (archaea)
CFN12_RS09540	PWY-6168	flavin biosynthesis III (fungi)
CFN12_RS09540	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS09545	PWY-5525	D-glucuronate degradation I
CFN12_RS09600	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFN12_RS09600	PWY-5723	Rubisco shunt
CFN12_RS09635	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CFN12_RS09635	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CFN12_RS09640	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFN12_RS09640	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CFN12_RS09655	PWY-6502	oxidized GTP and dGTP detoxification
CFN12_RS09665	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS09665	PWY-1622	formaldehyde assimilation I (serine pathway)
CFN12_RS09665	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFN12_RS09665	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS09665	PWY-5723	Rubisco shunt
CFN12_RS09665	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFN12_RS09665	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFN12_RS09665	PWY-6886	1-butanol autotrophic biosynthesis
CFN12_RS09665	PWY-6901	superpathway of glucose and xylose degradation
CFN12_RS09665	PWY-7003	glycerol degradation to butanol
CFN12_RS09665	PWY-7124	ethylene biosynthesis V (engineered)
CFN12_RS09665	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFN12_RS09670	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFN12_RS09935	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CFN12_RS09945	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CFN12_RS09945	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CFN12_RS09945	PWY-7766	CFN12_RS09945
CFN12_RS10050	PWY-5392	reductive TCA cycle II
CFN12_RS10050	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFN12_RS10050	PWY-5690	TCA cycle II (plants and fungi)
CFN12_RS10050	PWY-5913	TCA cycle VI (obligate autotrophs)
CFN12_RS10050	PWY-6728	methylaspartate cycle
CFN12_RS10050	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFN12_RS10050	PWY-7254	TCA cycle VII (acetate-producers)
CFN12_RS10050	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CFN12_RS10080	PWY-6004	glycine betaine biosynthesis V (from glycine)
CFN12_RS10085	PWY-6700	queuosine biosynthesis
CFN12_RS10285	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFN12_RS10415	PWY-7799	CFN12_RS10415
CFN12_RS10415	PWY-7800	CFN12_RS10415
CFN12_RS10505	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CFN12_RS10545	PWY-6123	inosine-5'-phosphate biosynthesis I
CFN12_RS10545	PWY-6124	inosine-5'-phosphate biosynthesis II
CFN12_RS10545	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS10545	PWY-7234	inosine-5'-phosphate biosynthesis III
CFN12_RS10580	PWY-5381	pyridine nucleotide cycling (plants)
CFN12_RS10590	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CFN12_RS10615	PWY-7805	CFN12_RS10615
CFN12_RS10615	PWY-7807	CFN12_RS10615
CFN12_RS11245	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CFN12_RS11245	PWY-5368	dimorphecolate biosynthesis
CFN12_RS11245	PWY-5995	linoleate biosynthesis I (plants)
CFN12_RS11245	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CFN12_RS11245	PWY-6803	phosphatidylcholine acyl editing
CFN12_RS11245	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CFN12_RS11245	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CFN12_RS11245	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CFN12_RS11245	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CFN12_RS11245	PWY-7470	phosphatidylcholine biosynthesis VII
CFN12_RS11245	PWY-7618	ricinoleate biosynthesis
CFN12_RS11255	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CFN12_RS11255	PWY-5368	dimorphecolate biosynthesis
CFN12_RS11255	PWY-5995	linoleate biosynthesis I (plants)
CFN12_RS11255	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CFN12_RS11255	PWY-6803	phosphatidylcholine acyl editing
CFN12_RS11255	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CFN12_RS11255	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CFN12_RS11255	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CFN12_RS11255	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CFN12_RS11255	PWY-7470	phosphatidylcholine biosynthesis VII
CFN12_RS11255	PWY-7618	ricinoleate biosynthesis
CFN12_RS11270	PWY-5101	L-isoleucine biosynthesis II
CFN12_RS11270	PWY-5103	L-isoleucine biosynthesis III
CFN12_RS11270	PWY-5104	L-isoleucine biosynthesis IV
CFN12_RS11270	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFN12_RS11275	PWY-5101	L-isoleucine biosynthesis II
CFN12_RS11275	PWY-5103	L-isoleucine biosynthesis III
CFN12_RS11275	PWY-5104	L-isoleucine biosynthesis IV
CFN12_RS11275	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CFN12_RS11275	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CFN12_RS11275	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CFN12_RS11275	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFN12_RS11285	PWY-5103	L-isoleucine biosynthesis III
CFN12_RS11285	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFN12_RS11290	PWY-6871	3-methylbutanol biosynthesis
CFN12_RS11295	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CFN12_RS11390	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFN12_RS11395	PWY-6012	acyl carrier protein metabolism I
CFN12_RS11395	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CFN12_RS11450	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFN12_RS11450	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFN12_RS11455	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFN12_RS11455	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFN12_RS11510	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CFN12_RS11510	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CFN12_RS11510	PWY-6897	thiamin salvage II
CFN12_RS11510	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CFN12_RS11510	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CFN12_RS11510	PWY-7356	thiamin salvage IV (yeast)
CFN12_RS11510	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFN12_RS11515	PWY-6897	thiamin salvage II
CFN12_RS11515	PWY-7356	thiamin salvage IV (yeast)
CFN12_RS11515	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFN12_RS11520	PWY-6910	hydroxymethylpyrimidine salvage
CFN12_RS11520	PWY-7356	thiamin salvage IV (yeast)
CFN12_RS11520	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFN12_RS11525	PWY-6899	base-degraded thiamin salvage
CFN12_RS11525	PWY-7356	thiamin salvage IV (yeast)
CFN12_RS11545	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFN12_RS11545	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFN12_RS11545	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFN12_RS11545	PWY-5994	palmitate biosynthesis I (animals and fungi)
CFN12_RS11545	PWY-6113	superpathway of mycolate biosynthesis
CFN12_RS11545	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFN12_RS11545	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFN12_RS11545	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFN12_RS11545	PWY-7663	gondoate biosynthesis (anaerobic)
CFN12_RS11545	PWY-7664	oleate biosynthesis IV (anaerobic)
CFN12_RS11545	PWY-7858	CFN12_RS11545
CFN12_RS11545	PWYG-321	mycolate biosynthesis
CFN12_RS11550	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFN12_RS11550	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFN12_RS11570	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS11580	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS11615	PWY-7183	pyrimidine nucleobases salvage I
CFN12_RS11620	PWY-1622	formaldehyde assimilation I (serine pathway)
CFN12_RS11620	PWY-181	photorespiration
CFN12_RS11620	PWY-2161	folate polyglutamylation
CFN12_RS11620	PWY-2201	folate transformations I
CFN12_RS11620	PWY-3661	glycine betaine degradation I
CFN12_RS11620	PWY-3661-1	glycine betaine degradation II (mammalian)
CFN12_RS11620	PWY-3841	folate transformations II
CFN12_RS11620	PWY-5497	purine nucleobases degradation II (anaerobic)
CFN12_RS11650	PWY-7199	pyrimidine deoxyribonucleosides salvage
CFN12_RS11665	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS11680	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFN12_RS11680	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFN12_RS11685	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS11685	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFN12_RS11685	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS11685	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFN12_RS11685	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFN12_RS11695	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CFN12_RS11695	PWY-7177	UTP and CTP dephosphorylation II
CFN12_RS11695	PWY-7185	UTP and CTP dephosphorylation I
CFN12_RS11710	PWY-3961	phosphopantothenate biosynthesis II
CFN12_RS11730	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CFN12_RS11730	PWY-6153	autoinducer AI-2 biosynthesis I
CFN12_RS11730	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CFN12_RS11740	PWY-7181	pyrimidine deoxyribonucleosides degradation
CFN12_RS11750	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
CFN12_RS11755	PWY-4202	arsenate detoxification I (glutaredoxin)
CFN12_RS11755	PWY-5532	adenosine nucleotides degradation IV
CFN12_RS11755	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CFN12_RS11755	PWY-6608	guanosine nucleotides degradation III
CFN12_RS11755	PWY-6609	adenine and adenosine salvage III
CFN12_RS11755	PWY-6611	adenine and adenosine salvage V
CFN12_RS11755	PWY-6620	guanine and guanosine salvage
CFN12_RS11755	PWY-6627	salinosporamide A biosynthesis
CFN12_RS11755	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
CFN12_RS11755	PWY-7179	purine deoxyribonucleosides degradation I
CFN12_RS11755	PWY-7179-1	purine deoxyribonucleosides degradation
CFN12_RS11780	PWY-3861	mannitol degradation II
CFN12_RS11780	PWY-3881	mannitol biosynthesis
CFN12_RS11780	PWY-5659	GDP-mannose biosynthesis
CFN12_RS11780	PWY-6992	1,5-anhydrofructose degradation
CFN12_RS11780	PWY-7456	mannan degradation
CFN12_RS11780	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
CFN12_RS11780	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
CFN12_RS11835	PWY-6749	CMP-legionaminate biosynthesis I
CFN12_RS11840	PWY-5723	Rubisco shunt
CFN12_RS11855	PWY-6531	mannitol cycle
CFN12_RS11865	PWY-6749	CMP-legionaminate biosynthesis I
CFN12_RS11880	PWY-31	canavanine degradation
CFN12_RS11880	PWY-4984	urea cycle
CFN12_RS11880	PWY-6305	putrescine biosynthesis IV
CFN12_RS11880	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CFN12_RS12015	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFN12_RS12080	PWY-6619	adenine and adenosine salvage VI
CFN12_RS12090	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CFN12_RS12090	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CFN12_RS12095	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CFN12_RS12095	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CFN12_RS12165	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CFN12_RS12170	PWY-5101	L-isoleucine biosynthesis II
CFN12_RS12170	PWY-5103	L-isoleucine biosynthesis III
CFN12_RS12170	PWY-5104	L-isoleucine biosynthesis IV
CFN12_RS12170	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CFN12_RS12170	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CFN12_RS12170	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CFN12_RS12170	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFN12_RS12270	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFN12_RS12490	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CFN12_RS12490	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
CFN12_RS12500	PWY-6823	molybdenum cofactor biosynthesis
CFN12_RS12510	PWY-6823	molybdenum cofactor biosynthesis
CFN12_RS12580	PWY-5704	urea degradation II
CFN12_RS12585	PWY-5704	urea degradation II
CFN12_RS12590	PWY-5704	urea degradation II
CFN12_RS12700	PWY-1881	formate oxidation to CO<sub>2</sub>
CFN12_RS12700	PWY-5497	purine nucleobases degradation II (anaerobic)
CFN12_RS12700	PWY-6696	oxalate degradation III
CFN12_RS12810	PWY-5028	L-histidine degradation II
CFN12_RS12810	PWY-5030	L-histidine degradation III
CFN12_RS12815	PWY-5028	L-histidine degradation II
CFN12_RS12815	PWY-5030	L-histidine degradation III
CFN12_RS12840	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFN12_RS12840	PWY-5723	Rubisco shunt
CFN12_RS12850	PWY-6317	galactose degradation I (Leloir pathway)
CFN12_RS12895	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
CFN12_RS12895	PWY-6174	mevalonate pathway II (archaea)
CFN12_RS12895	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
CFN12_RS12895	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
CFN12_RS12895	PWY-7102	bisabolene biosynthesis
CFN12_RS12895	PWY-7391	isoprene biosynthesis II (engineered)
CFN12_RS12895	PWY-7524	mevalonate pathway III (archaea)
CFN12_RS12895	PWY-7560	methylerythritol phosphate pathway II
CFN12_RS12895	PWY-922	mevalonate pathway I
CFN12_RS13005	PWY-7254	TCA cycle VII (acetate-producers)
CFN12_RS13040	PWY-101	photosynthesis light reactions
CFN12_RS13050	PWY-3781	aerobic respiration I (cytochrome c)
CFN12_RS13050	PWY-4521	arsenite oxidation I (respiratory)
CFN12_RS13050	PWY-6692	Fe(II) oxidation
CFN12_RS13050	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFN12_RS13090	PWY-7204	pyridoxal 5'-phosphate salvage II (plants)
CFN12_RS13090	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CFN12_RS13175	PWY-5194	siroheme biosynthesis
CFN12_RS13175	PWY-5196	factor 430 biosynthesis
CFN12_RS13175	PWY-5441	S-methyl-L-methionine cycle
CFN12_RS13175	PWY-702	L-methionine biosynthesis II
CFN12_RS13175	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CFN12_RS13185	PWY-6683	sulfate reduction III (assimilatory)
CFN12_RS13190	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CFN12_RS13285	PWY-1622	formaldehyde assimilation I (serine pathway)
CFN12_RS13285	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS13335	PWY-6578	8-amino-7-oxononanoate biosynthesis III
CFN12_RS13345	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CFN12_RS13355	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CFN12_RS13465	PWY-6654	phosphopantothenate biosynthesis III
CFN12_RS13465	PWY-7862	CFN12_RS13465
CFN12_RS13730	PWY-6749	CMP-legionaminate biosynthesis I
CFN12_RS13775	PWY-3801	sucrose degradation II (sucrose synthase)
CFN12_RS13775	PWY-6527	stachyose degradation
CFN12_RS13775	PWY-7238	sucrose biosynthesis II
CFN12_RS13775	PWY-7343	UDP-glucose biosynthesis
CFN12_RS13775	PWY-7817	CFN12_RS13775
CFN12_RS13805	PWY-4261	glycerol degradation I
CFN12_RS13805	PWY-5530	sorbitol biosynthesis II
CFN12_RS13880	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS14050	PWY-6174	mevalonate pathway II (archaea)
CFN12_RS14050	PWY-7391	isoprene biosynthesis II (engineered)
CFN12_RS14050	PWY-7524	mevalonate pathway III (archaea)
CFN12_RS14050	PWY-922	mevalonate pathway I
CFN12_RS14055	PWY-6174	mevalonate pathway II (archaea)
CFN12_RS14055	PWY-7391	isoprene biosynthesis II (engineered)
CFN12_RS14055	PWY-7524	mevalonate pathway III (archaea)
CFN12_RS14055	PWY-7571	ferrichrome A biosynthesis
CFN12_RS14055	PWY-922	mevalonate pathway I
CFN12_RS14100	PWY-6853	ethylene biosynthesis II (microbes)
CFN12_RS14280	PWY-5686	UMP biosynthesis
CFN12_RS14315	PWY-5155	&beta;-alanine biosynthesis III
CFN12_RS14325	PWY-6654	phosphopantothenate biosynthesis III
CFN12_RS14330	PWY-6654	phosphopantothenate biosynthesis III
CFN12_RS14330	PWY-7862	CFN12_RS14330
CFN12_RS14335	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CFN12_RS14340	PWY-5481	pyruvate fermentation to lactate
CFN12_RS14340	PWY-6901	superpathway of glucose and xylose degradation
CFN12_RS14365	PWY-1042	glycolysis IV (plant cytosol)
CFN12_RS14365	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFN12_RS14365	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFN12_RS14365	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFN12_RS14365	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFN12_RS14370	PWY-7254	TCA cycle VII (acetate-producers)
CFN12_RS14395	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CFN12_RS14395	PWY-7494	choline degradation IV
CFN12_RS14400	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CFN12_RS14400	PWY-7494	choline degradation IV
CFN12_RS14455	PWY-5194	siroheme biosynthesis
CFN12_RS14455	PWY-5196	factor 430 biosynthesis
CFN12_RS14455	PWY-5441	S-methyl-L-methionine cycle
CFN12_RS14455	PWY-702	L-methionine biosynthesis II
CFN12_RS14455	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CFN12_RS14460	PWY-6683	sulfate reduction III (assimilatory)
CFN12_RS14515	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CFN12_RS14515	PWY-5491	diethylphosphate degradation
CFN12_RS14555	PWY-4981	L-proline biosynthesis II (from arginine)
CFN12_RS14555	PWY-4984	urea cycle
CFN12_RS14555	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFN12_RS14560	PWY-4981	L-proline biosynthesis II (from arginine)
CFN12_RS14595	PWY-6619	adenine and adenosine salvage VI
CFN12_RS14600	PWY-3861	mannitol degradation II
CFN12_RS14600	PWY-3881	mannitol biosynthesis
CFN12_RS14600	PWY-5659	GDP-mannose biosynthesis
CFN12_RS14600	PWY-6992	1,5-anhydrofructose degradation
CFN12_RS14600	PWY-7456	mannan degradation
CFN12_RS14600	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
CFN12_RS14600	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
