SAHC1335_RS00005	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
SAHC1335_RS00010	SM00480	DNA polymerase III beta subunit
SAHC1335_RS00025	SM00387	Histidine kinase-like ATPases
SAHC1335_RS00025	SM00433	TopoisomeraseII
SAHC1335_RS00030	SM00434	DNA Topoisomerase IV
SAHC1335_RS00070	SM00267	diguanylate cyclase
SAHC1335_RS00085	SM00788	Adenylosuccinate synthetase
SAHC1335_RS00100	SM00448	cheY-homologous receiver domain
SAHC1335_RS00100	SM00862	Transcriptional regulatory protein, C terminal
SAHC1335_RS00105	SM00091	PAS domain
SAHC1335_RS00105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAHC1335_RS00105	SM00387	Histidine kinase-like ATPases
SAHC1335_RS00105	SM00388	His Kinase A (phosphoacceptor) domain
SAHC1335_RS00120	SM00849	Metallo-beta-lactamase superfamily
SAHC1335_RS00165	SM00857	Resolvase, N terminal domain
SAHC1335_RS00210	SM00650	Ribosomal RNA adenine dimethylases
SAHC1335_RS00270	SM00422	helix_turn_helix, mercury resistance
SAHC1335_RS00345	SM00450	Rhodanese Homology Domain
SAHC1335_RS00350	SM00849	Metallo-beta-lactamase superfamily
SAHC1335_RS00355	SM00450	Rhodanese Homology Domain
SAHC1335_RS00380	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SAHC1335_RS00420	SM00857	Resolvase, N terminal domain
SAHC1335_RS00425	SM00857	Resolvase, N terminal domain
SAHC1335_RS00455	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS00530	SM00148	Phospholipase C, catalytic domain (part); domain X
SAHC1335_RS00540	SM00342	helix_turn_helix, arabinose operon control protein
SAHC1335_RS00575	SM00257	Lysin motif
SAHC1335_RS00580	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS00640	SM00470	ParB-like nuclease domain
SAHC1335_RS00655	SM00822	SAHC1335_RS00655
SAHC1335_RS00700	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAHC1335_RS00720	SM01133	SAHC1335_RS00720
SAHC1335_RS00740	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS00745	SM00062	Bacterial periplasmic substrate-binding proteins
SAHC1335_RS00765	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS00845	SM00984	UDP binding domain
SAHC1335_RS00885	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS00945	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SAHC1335_RS01005	SM00487	DEAD-like helicases superfamily
SAHC1335_RS01015	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS01055	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS01100	SM00342	helix_turn_helix, arabinose operon control protein
SAHC1335_RS01100	SM00448	cheY-homologous receiver domain
SAHC1335_RS01175	SM00882	Coenzyme A transferase
SAHC1335_RS01260	SM00829	Enoylreductase
SAHC1335_RS01270	SM00829	Enoylreductase
SAHC1335_RS01325	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAHC1335_RS01325	SM00387	Histidine kinase-like ATPases
SAHC1335_RS01330	SM00448	cheY-homologous receiver domain
SAHC1335_RS01330	SM00850	LytTr DNA-binding domain
SAHC1335_RS01350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAHC1335_RS01350	SM00866	SAHC1335_RS01350
SAHC1335_RS01395	SM00354	helix_turn _helix lactose operon repressor
SAHC1335_RS01425	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS01605	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS01635	SM01130	SAHC1335_RS01635
SAHC1335_RS01690	SM00506	Appr-1"-p processing enzyme
SAHC1335_RS01730	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS01810	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS01820	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS01955	SM00470	ParB-like nuclease domain
SAHC1335_RS02040	SM00855	Phosphoglycerate mutase family
SAHC1335_RS02110	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAHC1335_RS02110	SM01240	SAHC1335_RS02110
SAHC1335_RS02140	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS02145	SM00889	Elongation factor G, domain IV
SAHC1335_RS02180	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS02210	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS02440	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SAHC1335_RS02470	SM00014	Acid phosphatase homologues
SAHC1335_RS02500	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS02500	SM00930	SAHC1335_RS02500
SAHC1335_RS02515	SM00257	Lysin motif
SAHC1335_RS02570	SM00642	Alpha-amylase domain
SAHC1335_RS02575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAHC1335_RS02575	SM00866	SAHC1335_RS02575
SAHC1335_RS02600	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS02610	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAHC1335_RS02610	SM00493	SAHC1335_RS02610
SAHC1335_RS02675	SM00465	GIY-YIG type nucleases (URI domain)
SAHC1335_RS02700	SM00493	SAHC1335_RS02700
SAHC1335_RS02705	SM00650	Ribosomal RNA adenine dimethylases
SAHC1335_RS02745	SM01400	SAHC1335_RS02745
SAHC1335_RS02765	SM00487	DEAD-like helicases superfamily
SAHC1335_RS02765	SM00490	helicase superfamily c-terminal domain
SAHC1335_RS02765	SM00982	SAHC1335_RS02765
SAHC1335_RS02765	SM01058	CarD-like/TRCF domain
SAHC1335_RS02780	SM00363	S4 RNA-binding domain
SAHC1335_RS02790	SM00316	Ribosomal protein S1-like RNA-binding domain
SAHC1335_RS02795	SM00977	TilS substrate C-terminal domain
SAHC1335_RS02805	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS02825	SM00905	Dihydroneopterin aldolase
SAHC1335_RS02910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAHC1335_RS02945	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS02945	SM01086	C-terminal, D2-small domain, of ClpB protein
SAHC1335_RS02955	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS02960	SM00670	Large family of predicted nucleotide-binding domains
SAHC1335_RS02975	SM00840	SAHC1335_RS02975
SAHC1335_RS02985	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SAHC1335_RS03005	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SAHC1335_RS03005	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SAHC1335_RS03010	SM00649	Ribosomal protein L11/L12
SAHC1335_RS03040	SM00663	RNA polymerase I subunit A N-terminus
SAHC1335_RS03060	SM00838	Elongation factor G C-terminus
SAHC1335_RS03060	SM00889	Elongation factor G, domain IV
SAHC1335_RS03175	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SAHC1335_RS03235	SM00986	Uracil DNA glycosylase superfamily
SAHC1335_RS03235	SM00987	UreE urease accessory protein, C-terminal domain 
SAHC1335_RS03375	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAHC1335_RS03385	SM00829	Enoylreductase
SAHC1335_RS03400	SM00836	DALR anticodon binding domain
SAHC1335_RS03400	SM01016	Arginyl tRNA synthetase N terminal dom
SAHC1335_RS03405	SM00478	endonuclease III
SAHC1335_RS03520	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS03525	SM00529	Helix-turn-helix diphteria tox regulatory element
SAHC1335_RS03525	SM00899	SAHC1335_RS03525
SAHC1335_RS03540	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS03570	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS03590	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS03610	SM01120	SAHC1335_RS03610
SAHC1335_RS03655	SM00448	cheY-homologous receiver domain
SAHC1335_RS03655	SM00862	Transcriptional regulatory protein, C terminal
SAHC1335_RS03660	SM00387	Histidine kinase-like ATPases
SAHC1335_RS03665	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS03685	SM00257	Lysin motif
SAHC1335_RS03695	SM00342	helix_turn_helix, arabinose operon control protein
SAHC1335_RS03790	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS03795	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS03800	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS03815	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SAHC1335_RS03880	SM00420	helix_turn_helix, Deoxyribose operon repressor
SAHC1335_RS03880	SM01134	SAHC1335_RS03880
SAHC1335_RS03905	SM01091	Transporter associated domain
SAHC1335_RS03920	SM00387	Histidine kinase-like ATPases
SAHC1335_RS03920	SM00388	His Kinase A (phosphoacceptor) domain
SAHC1335_RS03925	SM00448	cheY-homologous receiver domain
SAHC1335_RS03925	SM00862	Transcriptional regulatory protein, C terminal
SAHC1335_RS03985	SM00796	Allophanate hydrolase subunit 1
SAHC1335_RS03990	SM00797	Allophanate hydrolase subunit 2
SAHC1335_RS04005	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS04010	SM00341	Helicase and RNase D C-terminal
SAHC1335_RS04010	SM00487	DEAD-like helicases superfamily
SAHC1335_RS04010	SM00490	helicase superfamily c-terminal domain
SAHC1335_RS04010	SM00956	SAHC1335_RS04010
SAHC1335_RS04015	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS04035	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SAHC1335_RS04095	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS04150	SM00267	diguanylate cyclase
SAHC1335_RS04170	SM00487	DEAD-like helicases superfamily
SAHC1335_RS04170	SM00490	helicase superfamily c-terminal domain
SAHC1335_RS04185	SM00957	SecA DEAD-like domain
SAHC1335_RS04185	SM00958	SecA preprotein cross-linking domain
SAHC1335_RS04195	SM00937	SAHC1335_RS04195
SAHC1335_RS04205	SM00257	Lysin motif
SAHC1335_RS04220	SM00487	DEAD-like helicases superfamily
SAHC1335_RS04220	SM00490	helicase superfamily c-terminal domain
SAHC1335_RS04245	SM00028	Tetratricopeptide repeats
SAHC1335_RS04300	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SAHC1335_RS04320	SM01192	SAHC1335_RS04320
SAHC1335_RS04320	SM01193	SAHC1335_RS04320
SAHC1335_RS04340	SM00316	Ribosomal protein S1-like RNA-binding domain
SAHC1335_RS04340	SM00357	Cold shock protein domain
SAHC1335_RS04340	SM00955	SAHC1335_RS04340
SAHC1335_RS04415	SM00318	Staphylococcal nuclease homologues
SAHC1335_RS04425	SM00357	Cold shock protein domain
SAHC1335_RS04465	SM00855	Phosphoglycerate mutase family
SAHC1335_RS04525	SM00493	SAHC1335_RS04525
SAHC1335_RS04535	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS04535	SM00930	SAHC1335_RS04535
SAHC1335_RS04555	SM00513	Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation
SAHC1335_RS04565	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS04590	SM00942	Primase C terminal 1 (PriCT-1)
SAHC1335_RS04665	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS04730	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAHC1335_RS04875	SM01298	SAHC1335_RS04875
SAHC1335_RS04885	SM00316	Ribosomal protein S1-like RNA-binding domain
SAHC1335_RS04900	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SAHC1335_RS04980	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS04980	SM01086	C-terminal, D2-small domain, of ClpB protein
SAHC1335_RS05025	SM00825	Beta-ketoacyl synthase
SAHC1335_RS05045	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS05050	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS05065	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS05070	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS05120	SM01118	SAHC1335_RS05120
SAHC1335_RS05130	SM00954	Region found in RelA / SpoT proteins
SAHC1335_RS05145	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAHC1335_RS05145	SM00924	MgtE intracellular N domain
SAHC1335_RS05215	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAHC1335_RS05245	SM00914	SAHC1335_RS05245
SAHC1335_RS05285	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS05380	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS05390	SM00047	Lysozyme subfamily 2
SAHC1335_RS05390	SM00644	SAHC1335_RS05390
SAHC1335_RS05450	SM01001	AIR carboxylase
SAHC1335_RS05470	SM01211	SAHC1335_RS05470
SAHC1335_RS05495	SM00798	AICARFT/IMPCHase bienzyme
SAHC1335_RS05495	SM00851	MGS-like domain
SAHC1335_RS05500	SM01209	SAHC1335_RS05500
SAHC1335_RS05500	SM01210	SAHC1335_RS05500
SAHC1335_RS05510	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS05580	SM00849	Metallo-beta-lactamase superfamily
SAHC1335_RS05610	SM00861	Transketolase, pyrimidine binding domain
SAHC1335_RS05630	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS05635	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS05685	SM00838	Elongation factor G C-terminus
SAHC1335_RS05710	SM00878	Biotin carboxylase C-terminal domain
SAHC1335_RS05790	SM00857	Resolvase, N terminal domain
SAHC1335_RS05805	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS05810	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS05830	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS06090	SM00047	Lysozyme subfamily 2
SAHC1335_RS06110	SM00287	Bacterial SH3 domain homologues
SAHC1335_RS06110	SM00644	SAHC1335_RS06110
SAHC1335_RS06115	SM00725	NEAr Transporter domain
SAHC1335_RS06120	SM00725	NEAr Transporter domain
SAHC1335_RS06125	SM00725	NEAr Transporter domain
SAHC1335_RS06165	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SAHC1335_RS06175	SM00873	B3/4 domain
SAHC1335_RS06175	SM00874	tRNA synthetase B5 domain
SAHC1335_RS06175	SM00896	Ferredoxin-fold anticodon binding domain
SAHC1335_RS06195	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAHC1335_RS06195	SM00481	DNA polymerase alpha chain like domain
SAHC1335_RS06195	SM00483	DNA polymerase X family
SAHC1335_RS06200	SM00463	Small MutS-related domain
SAHC1335_RS06200	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SAHC1335_RS06200	SM00534	ATPase domain of DNA mismatch repair MUTS family
SAHC1335_RS06215	SM00465	GIY-YIG type nucleases (URI domain)
SAHC1335_RS06425	SM00740	SAHC1335_RS06425
SAHC1335_RS06445	SM00842	Cell division protein FtsA
SAHC1335_RS06450	SM00864	Tubulin/FtsZ family, GTPase domain
SAHC1335_RS06450	SM00865	Tubulin/FtsZ family, C-terminal domain
SAHC1335_RS06475	SM00363	S4 RNA-binding domain
SAHC1335_RS06505	SM00363	S4 RNA-binding domain
SAHC1335_RS06530	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SAHC1335_RS06535	SM00851	MGS-like domain
SAHC1335_RS06535	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SAHC1335_RS06535	SM01209	SAHC1335_RS06535
SAHC1335_RS06540	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SAHC1335_RS06565	SM00072	Guanylate kinase homologues.
SAHC1335_RS06570	SM01409	SAHC1335_RS06570
SAHC1335_RS06580	SM00487	DEAD-like helicases superfamily
SAHC1335_RS06580	SM00490	helicase superfamily c-terminal domain
SAHC1335_RS06615	SM00331	Sigma factor PP2C-like phosphatases
SAHC1335_RS06615	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SAHC1335_RS06620	SM00220	Serine/Threonine protein kinases, catalytic domain
SAHC1335_RS06620	SM00740	SAHC1335_RS06620
SAHC1335_RS06635	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
SAHC1335_RS06650	SM01120	SAHC1335_RS06650
SAHC1335_RS06650	SM01121	SAHC1335_RS06650
SAHC1335_RS06655	SM00487	DEAD-like helicases superfamily
SAHC1335_RS06655	SM00490	helicase superfamily c-terminal domain
SAHC1335_RS06670	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SAHC1335_RS06675	SM00822	SAHC1335_RS06675
SAHC1335_RS06690	SM00358	Double-stranded RNA binding motif
SAHC1335_RS06690	SM00535	Ribonuclease III family
SAHC1335_RS06695	SM00968	SMC proteins Flexible Hinge Domain
SAHC1335_RS06700	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS06700	SM00962	SRP54-type protein, GTPase domain
SAHC1335_RS06700	SM00963	SRP54-type protein, helical bundle domain
SAHC1335_RS06710	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS06710	SM00962	SRP54-type protein, GTPase domain
SAHC1335_RS06710	SM00963	SRP54-type protein, helical bundle domain
SAHC1335_RS06760	SM00881	CoA binding domain
SAHC1335_RS06765	SM00257	Lysin motif
SAHC1335_RS06780	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SAHC1335_RS06780	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SAHC1335_RS06780	SM00493	SAHC1335_RS06780
SAHC1335_RS06800	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS06800	SM01086	C-terminal, D2-small domain, of ClpB protein
SAHC1335_RS06860	SM00479	SAHC1335_RS06860
SAHC1335_RS06860	SM00481	DNA polymerase alpha chain like domain
SAHC1335_RS06870	SM00316	Ribosomal protein S1-like RNA-binding domain
SAHC1335_RS06870	SM00322	K homology RNA-binding domain
SAHC1335_RS06900	SM00904	Riboflavin kinase
SAHC1335_RS06905	SM01387	SAHC1335_RS06905
SAHC1335_RS06910	SM00316	Ribosomal protein S1-like RNA-binding domain
SAHC1335_RS06910	SM00322	K homology RNA-binding domain
SAHC1335_RS06915	SM00849	Metallo-beta-lactamase superfamily
SAHC1335_RS06920	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS06920	SM00843	SAHC1335_RS06920
SAHC1335_RS06925	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAHC1335_RS06925	SM00866	SAHC1335_RS06925
SAHC1335_RS06950	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS06960	SM00852	Probable molybdopterin binding domain
SAHC1335_RS06965	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS06970	SM00322	K homology RNA-binding domain
SAHC1335_RS06970	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAHC1335_RS07000	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAHC1335_RS07015	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SAHC1335_RS07015	SM00534	ATPase domain of DNA mismatch repair MUTS family
SAHC1335_RS07020	SM00853	MutL C terminal dimerisation domain
SAHC1335_RS07020	SM01340	SAHC1335_RS07020
SAHC1335_RS07075	SM00422	helix_turn_helix, mercury resistance
SAHC1335_RS07080	SM01230	SAHC1335_RS07080
SAHC1335_RS07140	SM00421	helix_turn_helix, Lux Regulon
SAHC1335_RS07140	SM00448	cheY-homologous receiver domain
SAHC1335_RS07150	SM00318	Staphylococcal nuclease homologues
SAHC1335_RS07205	SM01060	SAHC1335_RS07205
SAHC1335_RS07220	SM01240	SAHC1335_RS07220
SAHC1335_RS07250	SM00861	Transketolase, pyrimidine binding domain
SAHC1335_RS07305	SM01207	SAHC1335_RS07305
SAHC1335_RS07310	SM00387	Histidine kinase-like ATPases
SAHC1335_RS07310	SM00433	TopoisomeraseII
SAHC1335_RS07315	SM00434	DNA Topoisomerase IV
SAHC1335_RS07330	SM01061	CAT RNA binding domain
SAHC1335_RS07435	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS07440	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS07475	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS07505	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS07510	SM01321	SAHC1335_RS07510
SAHC1335_RS07520	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SAHC1335_RS07525	SM01130	SAHC1335_RS07525
SAHC1335_RS07545	SM01005	Alanine racemase, C-terminal domain
SAHC1335_RS07560	SM00357	Cold shock protein domain
SAHC1335_RS07610	SM00327	von Willebrand factor (vWF) type A domain
SAHC1335_RS07635	SM00861	Transketolase, pyrimidine binding domain
SAHC1335_RS07640	SM00387	Histidine kinase-like ATPases
SAHC1335_RS07640	SM00388	His Kinase A (phosphoacceptor) domain
SAHC1335_RS07645	SM00448	cheY-homologous receiver domain
SAHC1335_RS07645	SM00862	Transcriptional regulatory protein, C terminal
SAHC1335_RS07660	SM01321	SAHC1335_RS07660
SAHC1335_RS07665	SM00014	Acid phosphatase homologues
SAHC1335_RS07680	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAHC1335_RS07680	SM00245	tail specific protease
SAHC1335_RS07735	SM00932	Scaffold protein Nfu/NifU N terminal
SAHC1335_RS07790	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SAHC1335_RS07790	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SAHC1335_RS07795	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SAHC1335_RS07795	SM00475	5'-3' exonuclease
SAHC1335_RS07820	SM00981	SAHC1335_RS07820
SAHC1335_RS07865	SM00478	endonuclease III
SAHC1335_RS07865	SM00525	SAHC1335_RS07865
SAHC1335_RS07880	SM00479	SAHC1335_RS07880
SAHC1335_RS07880	SM00491	SAHC1335_RS07880
SAHC1335_RS07920	SM00914	SAHC1335_RS07920
SAHC1335_RS07925	SM00028	Tetratricopeptide repeats
SAHC1335_RS07950	SM00562	SAHC1335_RS07950
SAHC1335_RS07975	SM00411	bacterial (prokaryotic) histone like domain
SAHC1335_RS07990	SM00316	Ribosomal protein S1-like RNA-binding domain
SAHC1335_RS08015	SM00870	SAHC1335_RS08015
SAHC1335_RS08030	SM00257	Lysin motif
SAHC1335_RS08035	SM00487	DEAD-like helicases superfamily
SAHC1335_RS08035	SM00490	helicase superfamily c-terminal domain
SAHC1335_RS08090	SM00287	Bacterial SH3 domain homologues
SAHC1335_RS08090	SM00646	SAHC1335_RS08090
SAHC1335_RS08155	SM00635	Bacterial Ig-like domain 2
SAHC1335_RS08210	SM00507	HNH nucleases
SAHC1335_RS08220	SM00487	DEAD-like helicases superfamily
SAHC1335_RS08225	SM00990	SAHC1335_RS08225
SAHC1335_RS08310	SM00482	DNA polymerase A domain
SAHC1335_RS08380	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS08420	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAHC1335_RS08420	SM00387	Histidine kinase-like ATPases
SAHC1335_RS08420	SM00388	His Kinase A (phosphoacceptor) domain
SAHC1335_RS08425	SM00448	cheY-homologous receiver domain
SAHC1335_RS08425	SM00862	Transcriptional regulatory protein, C terminal
SAHC1335_RS08430	SM00363	S4 RNA-binding domain
SAHC1335_RS08495	SM00342	helix_turn_helix, arabinose operon control protein
SAHC1335_RS08495	SM00871	Bacterial transcription activator, effector binding domain
SAHC1335_RS08500	SM00642	Alpha-amylase domain
SAHC1335_RS08505	SM00354	helix_turn _helix lactose operon repressor
SAHC1335_RS08520	SM01350	SAHC1335_RS08520
SAHC1335_RS08550	SM00861	Transketolase, pyrimidine binding domain
SAHC1335_RS08600	SM00878	Biotin carboxylase C-terminal domain
SAHC1335_RS08610	SM00841	Elongation factor P, C-terminal
SAHC1335_RS08610	SM01185	SAHC1335_RS08610
SAHC1335_RS08635	SM00450	Rhodanese Homology Domain
SAHC1335_RS08695	SM00849	Metallo-beta-lactamase superfamily
SAHC1335_RS08750	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS08755	SM00518	AP endonuclease family 2
SAHC1335_RS08760	SM00487	DEAD-like helicases superfamily
SAHC1335_RS08760	SM00490	helicase superfamily c-terminal domain
SAHC1335_RS08780	SM00400	zinc finger
SAHC1335_RS08780	SM00493	SAHC1335_RS08780
SAHC1335_RS08790	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAHC1335_RS08850	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAHC1335_RS08865	SM00271	DnaJ molecular chaperone homology domain
SAHC1335_RS08885	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAHC1335_RS08895	SM00838	Elongation factor G C-terminus
SAHC1335_RS08910	SM00849	Metallo-beta-lactamase superfamily
SAHC1335_RS08920	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAHC1335_RS08935	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAHC1335_RS08945	SM01103	SAHC1335_RS08945
SAHC1335_RS09000	SM00878	Biotin carboxylase C-terminal domain
SAHC1335_RS09010	SM00797	Allophanate hydrolase subunit 2
SAHC1335_RS09015	SM00796	Allophanate hydrolase subunit 1
SAHC1335_RS09050	SM00732	Likely ribonuclease with RNase H fold.
SAHC1335_RS09060	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SAHC1335_RS09065	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS09070	SM00028	Tetratricopeptide repeats
SAHC1335_RS09105	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS09135	SM00287	Bacterial SH3 domain homologues
SAHC1335_RS09135	SM00646	SAHC1335_RS09135
SAHC1335_RS09145	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAHC1335_RS09145	SM00954	Region found in RelA / SpoT proteins
SAHC1335_RS09150	SM01321	SAHC1335_RS09150
SAHC1335_RS09170	SM01323	SAHC1335_RS09170
SAHC1335_RS09185	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS09190	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAHC1335_RS09320	SM01004	Delta-aminolevulinic acid dehydratase
SAHC1335_RS09350	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS09350	SM00994	ClpX C4-type zinc finger
SAHC1335_RS09350	SM01086	C-terminal, D2-small domain, of ClpB protein
SAHC1335_RS09400	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SAHC1335_RS09425	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SAHC1335_RS09435	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SAHC1335_RS09435	SM01232	SAHC1335_RS09435
SAHC1335_RS09440	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SAHC1335_RS09440	SM00474	3'-5' exonuclease
SAHC1335_RS09440	SM00475	5'-3' exonuclease
SAHC1335_RS09440	SM00482	DNA polymerase A domain
SAHC1335_RS09450	SM00387	Histidine kinase-like ATPases
SAHC1335_RS09450	SM00388	His Kinase A (phosphoacceptor) domain
SAHC1335_RS09455	SM00448	cheY-homologous receiver domain
SAHC1335_RS09455	SM00862	Transcriptional regulatory protein, C terminal
SAHC1335_RS09465	SM01329	SAHC1335_RS09465
SAHC1335_RS09510	SM00919	Malic enzyme, NAD binding domain
SAHC1335_RS09510	SM01274	SAHC1335_RS09510
SAHC1335_RS09515	SM00481	DNA polymerase alpha chain like domain
SAHC1335_RS09525	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAHC1335_RS09535	SM00849	Metallo-beta-lactamase superfamily
SAHC1335_RS09550	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SAHC1335_RS09550	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SAHC1335_RS09580	SM00981	SAHC1335_RS09580
SAHC1335_RS09600	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAHC1335_RS09605	SM00363	S4 RNA-binding domain
SAHC1335_RS09605	SM01390	SAHC1335_RS09605
SAHC1335_RS09650	SM00563	Phosphate acyltransferases
SAHC1335_RS09655	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAHC1335_RS09660	SM00363	S4 RNA-binding domain
SAHC1335_RS09675	SM00725	NEAr Transporter domain
SAHC1335_RS09705	SM00354	helix_turn _helix lactose operon repressor
SAHC1335_RS09715	SM00830	Chorismate mutase type II
SAHC1335_RS09740	SM00843	SAHC1335_RS09740
SAHC1335_RS09770	SM00849	Metallo-beta-lactamase superfamily
SAHC1335_RS09800	SM00363	S4 RNA-binding domain
SAHC1335_RS09820	SM00450	Rhodanese Homology Domain
SAHC1335_RS09845	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS09900	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SAHC1335_RS09910	SM00226	Low molecular weight phosphatase family
SAHC1335_RS09915	SM00047	Lysozyme subfamily 2
SAHC1335_RS10010	SM01321	SAHC1335_RS10010
SAHC1335_RS10025	SM01234	SAHC1335_RS10025
SAHC1335_RS10045	SM00894	Excalibur calcium-binding domain
SAHC1335_RS10190	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS10205	SM01260	SAHC1335_RS10205
SAHC1335_RS10325	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS10350	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAHC1335_RS10380	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS10385	SM00421	helix_turn_helix, Lux Regulon
SAHC1335_RS10385	SM00448	cheY-homologous receiver domain
SAHC1335_RS10435	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS10440	SM00062	Bacterial periplasmic substrate-binding proteins
SAHC1335_RS10635	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS10650	SM00478	endonuclease III
SAHC1335_RS10720	SM00226	Low molecular weight phosphatase family
SAHC1335_RS10735	SM00421	helix_turn_helix, Lux Regulon
SAHC1335_RS10735	SM00448	cheY-homologous receiver domain
SAHC1335_RS10795	SM00479	SAHC1335_RS10795
SAHC1335_RS10815	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SAHC1335_RS10825	SM00845	GatB domain
SAHC1335_RS10850	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAHC1335_RS10850	SM00292	breast cancer carboxy-terminal domain
SAHC1335_RS10850	SM00532	Ligase N family
SAHC1335_RS10870	SM00998	Adenylosuccinate lyase C-terminus
SAHC1335_RS10925	SM00710	Parallel beta-helix repeats
SAHC1335_RS10935	SM01131	SAHC1335_RS10935
SAHC1335_RS10995	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS11005	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS11010	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAHC1335_RS11075	SM00287	Bacterial SH3 domain homologues
SAHC1335_RS11190	SM00507	HNH nucleases
SAHC1335_RS11360	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS11450	SM00883	Chaperonin 10 Kd subunit
SAHC1335_RS11480	SM00793	Accessory gene regulator B
SAHC1335_RS11485	SM00794	Staphylococcal AgrD protein
SAHC1335_RS11505	SM00448	cheY-homologous receiver domain
SAHC1335_RS11505	SM00850	LytTr DNA-binding domain
SAHC1335_RS11520	SM00640	Glycosyl hydrolases family 32
SAHC1335_RS11525	SM00354	helix_turn _helix lactose operon repressor
SAHC1335_RS11545	SM00881	CoA binding domain
SAHC1335_RS11550	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS11560	SM00534	ATPase domain of DNA mismatch repair MUTS family
SAHC1335_RS11610	SM00917	LeuA allosteric (dimerisation) domain
SAHC1335_RS11615	SM01329	SAHC1335_RS11615
SAHC1335_RS11645	SM00731	SprT homologues.
SAHC1335_RS11650	SM00316	Ribosomal protein S1-like RNA-binding domain
SAHC1335_RS11650	SM00732	Likely ribonuclease with RNase H fold.
SAHC1335_RS11670	SM00331	Sigma factor PP2C-like phosphatases
SAHC1335_RS11670	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SAHC1335_RS11690	SM01005	Alanine racemase, C-terminal domain
SAHC1335_RS11735	SM00387	Histidine kinase-like ATPases
SAHC1335_RS11735	SM00388	His Kinase A (phosphoacceptor) domain
SAHC1335_RS11740	SM00448	cheY-homologous receiver domain
SAHC1335_RS11740	SM00862	Transcriptional regulatory protein, C terminal
SAHC1335_RS11745	SM00487	DEAD-like helicases superfamily
SAHC1335_RS11745	SM00490	helicase superfamily c-terminal domain
SAHC1335_RS11780	SM00155	Phospholipase D. Active site motifs.
SAHC1335_RS11785	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAHC1335_RS11865	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS11925	SM00226	Low molecular weight phosphatase family
SAHC1335_RS11940	SM00937	SAHC1335_RS11940
SAHC1335_RS11955	SM00357	Cold shock protein domain
SAHC1335_RS11955	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS11955	SM00959	Rho termination factor, N-terminal domain
SAHC1335_RS12035	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SAHC1335_RS12045	SM01133	SAHC1335_RS12045
SAHC1335_RS12085	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SAHC1335_RS12125	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS12360	SM00829	Enoylreductase
SAHC1335_RS12365	SM00829	Enoylreductase
SAHC1335_RS12390	SM01133	SAHC1335_RS12390
SAHC1335_RS12410	SM00420	helix_turn_helix, Deoxyribose operon repressor
SAHC1335_RS12410	SM01134	SAHC1335_RS12410
SAHC1335_RS12440	SM00422	helix_turn_helix, mercury resistance
SAHC1335_RS12495	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS12550	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS12555	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS12565	SM00662	RNA polymerases D
SAHC1335_RS12585	SM00316	Ribosomal protein S1-like RNA-binding domain
SAHC1335_RS12640	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SAHC1335_RS12645	SM01374	SAHC1335_RS12645
SAHC1335_RS12665	SM00322	K homology RNA-binding domain
SAHC1335_RS12680	SM01382	SAHC1335_RS12680
SAHC1335_RS12680	SM01383	SAHC1335_RS12680
SAHC1335_RS12700	SM01403	SAHC1335_RS12700
SAHC1335_RS12715	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SAHC1335_RS12715	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SAHC1335_RS12715	SM00493	SAHC1335_RS12715
SAHC1335_RS12775	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS12805	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAHC1335_RS12830	SM00852	Probable molybdopterin binding domain
SAHC1335_RS12840	SM00852	Probable molybdopterin binding domain
SAHC1335_RS12850	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS12915	SM00988	UreE urease accessory protein, N-terminal domain
SAHC1335_RS12955	SM00342	helix_turn_helix, arabinose operon control protein
SAHC1335_RS13005	SM00047	Lysozyme subfamily 2
SAHC1335_RS13020	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SAHC1335_RS13020	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SAHC1335_RS13035	SM00420	helix_turn_helix, Deoxyribose operon repressor
SAHC1335_RS13195	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS13285	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS13300	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS13310	SM00448	cheY-homologous receiver domain
SAHC1335_RS13310	SM00862	Transcriptional regulatory protein, C terminal
SAHC1335_RS13315	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAHC1335_RS13315	SM00387	Histidine kinase-like ATPases
SAHC1335_RS13315	SM00388	His Kinase A (phosphoacceptor) domain
SAHC1335_RS13320	SM00850	LytTr DNA-binding domain
SAHC1335_RS13360	SM00829	Enoylreductase
SAHC1335_RS13415	SM00342	helix_turn_helix, arabinose operon control protein
SAHC1335_RS13440	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS13465	SM00422	helix_turn_helix, mercury resistance
SAHC1335_RS13470	SM00421	helix_turn_helix, Lux Regulon
SAHC1335_RS13470	SM00448	cheY-homologous receiver domain
SAHC1335_RS13475	SM00387	Histidine kinase-like ATPases
SAHC1335_RS13500	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SAHC1335_RS13580	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS13590	SM00062	Bacterial periplasmic substrate-binding proteins
SAHC1335_RS13590	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SAHC1335_RS13610	SM00855	Phosphoglycerate mutase family
SAHC1335_RS13670	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAHC1335_RS13670	SM00876	Biotin and Thiamin Synthesis associated domain
SAHC1335_RS13700	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS13735	SM00871	Bacterial transcription activator, effector binding domain
SAHC1335_RS13815	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAHC1335_RS13815	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS13855	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS13900	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS13905	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS14045	SM01208	SAHC1335_RS14045
SAHC1335_RS14100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAHC1335_RS14100	SM00895	SAHC1335_RS14100
SAHC1335_RS14105	SM00422	helix_turn_helix, mercury resistance
SAHC1335_RS14110	SM00954	Region found in RelA / SpoT proteins
SAHC1335_RS14145	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS14150	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS14185	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS14215	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS14350	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS14350	SM01086	C-terminal, D2-small domain, of ClpB protein
SAHC1335_RS14365	SM00899	SAHC1335_RS14365
SAHC1335_RS14390	SM01266	SAHC1335_RS14390
SAHC1335_RS14550	SM00857	Resolvase, N terminal domain
SAHC1335_RS14690	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SAHC1335_RS14870	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS14875	SM00387	Histidine kinase-like ATPases
SAHC1335_RS14880	SM00448	cheY-homologous receiver domain
SAHC1335_RS14880	SM00862	Transcriptional regulatory protein, C terminal
SAHC1335_RS14900	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAHC1335_RS14985	SM00047	Lysozyme subfamily 2
SAHC1335_RS15010	SM00957	SecA DEAD-like domain
SAHC1335_RS15010	SM00958	SecA preprotein cross-linking domain
SAHC1335_RS15040	SM00903	Flavin reductase like domain
SAHC1335_RS15065	SM00903	Flavin reductase like domain
SAHC1335_RS15195	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS15210	SM00867	YceI-like domain 
SAHC1335_RS15220	SM00450	Rhodanese Homology Domain
SAHC1335_RS15270	SM00382	ATPases associated with a variety of cellular activities
SAHC1335_RS15305	SM00357	Cold shock protein domain
SAHC1335_RS15310	SM00530	Helix-turn-helix XRE-family like proteins 
SAHC1335_RS15325	SM00470	ParB-like nuclease domain
SAHC1335_RS15335	SM01228	SAHC1335_RS15335
