SAEMRSA15_RS00005 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain SAEMRSA15_RS00010 SM00480 DNA polymerase III beta subunit SAEMRSA15_RS00025 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS00025 SM00433 TopoisomeraseII SAEMRSA15_RS00030 SM00434 DNA Topoisomerase IV SAEMRSA15_RS00070 SM00267 diguanylate cyclase SAEMRSA15_RS00085 SM00788 Adenylosuccinate synthetase SAEMRSA15_RS00100 SM00448 cheY-homologous receiver domain SAEMRSA15_RS00100 SM00862 Transcriptional regulatory protein, C terminal SAEMRSA15_RS00105 SM00091 PAS domain SAEMRSA15_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SAEMRSA15_RS00105 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS00105 SM00388 His Kinase A (phosphoacceptor) domain SAEMRSA15_RS00120 SM00849 Metallo-beta-lactamase superfamily SAEMRSA15_RS00200 SM00857 Resolvase, N terminal domain SAEMRSA15_RS00205 SM00857 Resolvase, N terminal domain SAEMRSA15_RS00260 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS00360 SM00148 Phospholipase C, catalytic domain (part); domain X SAEMRSA15_RS00375 SM00342 helix_turn_helix, arabinose operon control protein SAEMRSA15_RS00415 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS00475 SM00470 ParB-like nuclease domain SAEMRSA15_RS00495 SM00822 SAEMRSA15_RS00495 SAEMRSA15_RS00535 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAEMRSA15_RS00555 SM01133 SAEMRSA15_RS00555 SAEMRSA15_RS00575 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS00580 SM00062 Bacterial periplasmic substrate-binding proteins SAEMRSA15_RS00595 SM01321 SAEMRSA15_RS00595 SAEMRSA15_RS00610 SM01321 SAEMRSA15_RS00610 SAEMRSA15_RS00685 SM00984 UDP binding domain SAEMRSA15_RS00725 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS00785 SM00859 Semialdehyde dehydrogenase, NAD binding domain SAEMRSA15_RS00845 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS00865 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS00905 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS00950 SM00342 helix_turn_helix, arabinose operon control protein SAEMRSA15_RS00950 SM00448 cheY-homologous receiver domain SAEMRSA15_RS01025 SM00882 Coenzyme A transferase SAEMRSA15_RS01110 SM00829 Enoylreductase SAEMRSA15_RS01120 SM00829 Enoylreductase SAEMRSA15_RS01170 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SAEMRSA15_RS01170 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS01175 SM00448 cheY-homologous receiver domain SAEMRSA15_RS01175 SM00850 LytTr DNA-binding domain SAEMRSA15_RS01195 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAEMRSA15_RS01195 SM00866 SAEMRSA15_RS01195 SAEMRSA15_RS01235 SM00354 helix_turn _helix lactose operon repressor SAEMRSA15_RS01265 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS01415 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS01445 SM01130 SAEMRSA15_RS01445 SAEMRSA15_RS01500 SM00506 Appr-1"-p processing enzyme SAEMRSA15_RS01540 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS01625 SM00530 Helix-turn-helix XRE-family like proteins SAEMRSA15_RS01635 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS01685 SM00470 ParB-like nuclease domain SAEMRSA15_RS01765 SM00855 Phosphoglycerate mutase family SAEMRSA15_RS01835 SM00116 Domain in cystathionine beta-synthase and other proteins. SAEMRSA15_RS01835 SM01240 SAEMRSA15_RS01835 SAEMRSA15_RS01995 SM00833 Cobalamin synthesis protein cobW C-terminal domain SAEMRSA15_RS02025 SM00014 Acid phosphatase homologues SAEMRSA15_RS02055 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS02055 SM00930 SAEMRSA15_RS02055 SAEMRSA15_RS02070 SM00257 Lysin motif SAEMRSA15_RS02125 SM00642 Alpha-amylase domain SAEMRSA15_RS02130 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAEMRSA15_RS02130 SM00866 SAEMRSA15_RS02130 SAEMRSA15_RS02145 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS02155 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAEMRSA15_RS02155 SM00493 SAEMRSA15_RS02155 SAEMRSA15_RS02220 SM00465 GIY-YIG type nucleases (URI domain) SAEMRSA15_RS02245 SM00493 SAEMRSA15_RS02245 SAEMRSA15_RS02250 SM00650 Ribosomal RNA adenine dimethylases SAEMRSA15_RS02290 SM01400 SAEMRSA15_RS02290 SAEMRSA15_RS02310 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS02310 SM00490 helicase superfamily c-terminal domain SAEMRSA15_RS02310 SM00982 SAEMRSA15_RS02310 SAEMRSA15_RS02310 SM01058 CarD-like/TRCF domain SAEMRSA15_RS02325 SM00363 S4 RNA-binding domain SAEMRSA15_RS02335 SM00316 Ribosomal protein S1-like RNA-binding domain SAEMRSA15_RS02340 SM00977 TilS substrate C-terminal domain SAEMRSA15_RS02350 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS02370 SM00905 Dihydroneopterin aldolase SAEMRSA15_RS02470 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAEMRSA15_RS02505 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS02505 SM01086 C-terminal, D2-small domain, of ClpB protein SAEMRSA15_RS02515 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS02520 SM00670 Large family of predicted nucleotide-binding domains SAEMRSA15_RS02535 SM00840 SAEMRSA15_RS02535 SAEMRSA15_RS02545 SM00967 RNA 2'-O ribose methyltransferase substrate binding SAEMRSA15_RS02565 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SAEMRSA15_RS02565 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SAEMRSA15_RS02570 SM00649 Ribosomal protein L11/L12 SAEMRSA15_RS02600 SM00663 RNA polymerase I subunit A N-terminus SAEMRSA15_RS02620 SM00838 Elongation factor G C-terminus SAEMRSA15_RS02620 SM00889 Elongation factor G, domain IV SAEMRSA15_RS02735 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SAEMRSA15_RS02785 SM00986 Uracil DNA glycosylase superfamily SAEMRSA15_RS02785 SM00987 UreE urease accessory protein, C-terminal domain SAEMRSA15_RS02900 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAEMRSA15_RS02910 SM00829 Enoylreductase SAEMRSA15_RS02925 SM00836 DALR anticodon binding domain SAEMRSA15_RS02925 SM01016 Arginyl tRNA synthetase N terminal dom SAEMRSA15_RS02930 SM00478 endonuclease III SAEMRSA15_RS03045 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS03050 SM00529 Helix-turn-helix diphteria tox regulatory element SAEMRSA15_RS03050 SM00899 SAEMRSA15_RS03050 SAEMRSA15_RS03065 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS03095 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS03115 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS03135 SM01120 SAEMRSA15_RS03135 SAEMRSA15_RS03180 SM00448 cheY-homologous receiver domain SAEMRSA15_RS03180 SM00862 Transcriptional regulatory protein, C terminal SAEMRSA15_RS03185 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS03190 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS03210 SM00257 Lysin motif SAEMRSA15_RS03220 SM00342 helix_turn_helix, arabinose operon control protein SAEMRSA15_RS03320 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS03325 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS03330 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS03335 SM00833 Cobalamin synthesis protein cobW C-terminal domain SAEMRSA15_RS03390 SM00420 helix_turn_helix, Deoxyribose operon repressor SAEMRSA15_RS03390 SM01134 SAEMRSA15_RS03390 SAEMRSA15_RS03415 SM01091 Transporter associated domain SAEMRSA15_RS03430 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS03430 SM00388 His Kinase A (phosphoacceptor) domain SAEMRSA15_RS03435 SM00448 cheY-homologous receiver domain SAEMRSA15_RS03435 SM00862 Transcriptional regulatory protein, C terminal SAEMRSA15_RS03490 SM00796 Allophanate hydrolase subunit 1 SAEMRSA15_RS03495 SM00797 Allophanate hydrolase subunit 2 SAEMRSA15_RS03510 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS03515 SM00341 Helicase and RNase D C-terminal SAEMRSA15_RS03515 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS03515 SM00490 helicase superfamily c-terminal domain SAEMRSA15_RS03515 SM00956 SAEMRSA15_RS03515 SAEMRSA15_RS03520 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS03540 SM00046 Diacylglycerol kinase catalytic domain (presumed) SAEMRSA15_RS03595 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS03650 SM00267 diguanylate cyclase SAEMRSA15_RS03670 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS03670 SM00490 helicase superfamily c-terminal domain SAEMRSA15_RS03685 SM00957 SecA DEAD-like domain SAEMRSA15_RS03685 SM00958 SecA preprotein cross-linking domain SAEMRSA15_RS03695 SM00937 SAEMRSA15_RS03695 SAEMRSA15_RS03705 SM00257 Lysin motif SAEMRSA15_RS03720 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS03720 SM00490 helicase superfamily c-terminal domain SAEMRSA15_RS03745 SM00028 Tetratricopeptide repeats SAEMRSA15_RS03785 SM00919 Malic enzyme, NAD binding domain SAEMRSA15_RS03785 SM01274 SAEMRSA15_RS03785 SAEMRSA15_RS03805 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAEMRSA15_RS03825 SM01192 SAEMRSA15_RS03825 SAEMRSA15_RS03825 SM01193 SAEMRSA15_RS03825 SAEMRSA15_RS03845 SM00316 Ribosomal protein S1-like RNA-binding domain SAEMRSA15_RS03845 SM00357 Cold shock protein domain SAEMRSA15_RS03845 SM00955 SAEMRSA15_RS03845 SAEMRSA15_RS03910 SM00318 Staphylococcal nuclease homologues SAEMRSA15_RS03915 SM00357 Cold shock protein domain SAEMRSA15_RS03955 SM00855 Phosphoglycerate mutase family SAEMRSA15_RS04010 SM00493 SAEMRSA15_RS04010 SAEMRSA15_RS04020 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS04020 SM00930 SAEMRSA15_RS04020 SAEMRSA15_RS04045 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS04105 SM00729 Elongator protein 3, MiaB family, Radical SAM SAEMRSA15_RS04250 SM01298 SAEMRSA15_RS04250 SAEMRSA15_RS04260 SM00316 Ribosomal protein S1-like RNA-binding domain SAEMRSA15_RS04275 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SAEMRSA15_RS04360 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS04360 SM01086 C-terminal, D2-small domain, of ClpB protein SAEMRSA15_RS04405 SM00825 Beta-ketoacyl synthase SAEMRSA15_RS04425 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS04445 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS04450 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS04485 SM01321 SAEMRSA15_RS04485 SAEMRSA15_RS04515 SM01118 SAEMRSA15_RS04515 SAEMRSA15_RS04525 SM00954 Region found in RelA / SpoT proteins SAEMRSA15_RS04540 SM00116 Domain in cystathionine beta-synthase and other proteins. SAEMRSA15_RS04540 SM00924 MgtE intracellular N domain SAEMRSA15_RS04605 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SAEMRSA15_RS04635 SM00914 SAEMRSA15_RS04635 SAEMRSA15_RS04770 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS04780 SM00047 Lysozyme subfamily 2 SAEMRSA15_RS04780 SM00644 SAEMRSA15_RS04780 SAEMRSA15_RS04840 SM01001 AIR carboxylase SAEMRSA15_RS04860 SM01211 SAEMRSA15_RS04860 SAEMRSA15_RS04885 SM00798 AICARFT/IMPCHase bienzyme SAEMRSA15_RS04885 SM00851 MGS-like domain SAEMRSA15_RS04890 SM01209 SAEMRSA15_RS04890 SAEMRSA15_RS04890 SM01210 SAEMRSA15_RS04890 SAEMRSA15_RS04900 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS04965 SM00849 Metallo-beta-lactamase superfamily SAEMRSA15_RS04995 SM00861 Transketolase, pyrimidine binding domain SAEMRSA15_RS05015 SM00530 Helix-turn-helix XRE-family like proteins SAEMRSA15_RS05020 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS05070 SM00838 Elongation factor G C-terminus SAEMRSA15_RS05095 SM00878 Biotin carboxylase C-terminal domain SAEMRSA15_RS05180 SM00725 NEAr Transporter domain SAEMRSA15_RS05185 SM00725 NEAr Transporter domain SAEMRSA15_RS05220 SM00967 RNA 2'-O ribose methyltransferase substrate binding SAEMRSA15_RS05230 SM00873 B3/4 domain SAEMRSA15_RS05230 SM00874 tRNA synthetase B5 domain SAEMRSA15_RS05230 SM00896 Ferredoxin-fold anticodon binding domain SAEMRSA15_RS05250 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAEMRSA15_RS05250 SM00481 DNA polymerase alpha chain like domain SAEMRSA15_RS05250 SM00483 DNA polymerase X family SAEMRSA15_RS05255 SM00463 Small MutS-related domain SAEMRSA15_RS05255 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SAEMRSA15_RS05255 SM00534 ATPase domain of DNA mismatch repair MUTS family SAEMRSA15_RS05270 SM00465 GIY-YIG type nucleases (URI domain) SAEMRSA15_RS05470 SM00740 SAEMRSA15_RS05470 SAEMRSA15_RS05490 SM00842 Cell division protein FtsA SAEMRSA15_RS05495 SM00864 Tubulin/FtsZ family, GTPase domain SAEMRSA15_RS05495 SM00865 Tubulin/FtsZ family, C-terminal domain SAEMRSA15_RS05520 SM00363 S4 RNA-binding domain SAEMRSA15_RS05550 SM00363 S4 RNA-binding domain SAEMRSA15_RS05575 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SAEMRSA15_RS05580 SM00851 MGS-like domain SAEMRSA15_RS05580 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SAEMRSA15_RS05580 SM01209 SAEMRSA15_RS05580 SAEMRSA15_RS05585 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SAEMRSA15_RS05610 SM00072 Guanylate kinase homologues. SAEMRSA15_RS05615 SM01409 SAEMRSA15_RS05615 SAEMRSA15_RS05625 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS05625 SM00490 helicase superfamily c-terminal domain SAEMRSA15_RS05660 SM00331 Sigma factor PP2C-like phosphatases SAEMRSA15_RS05660 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SAEMRSA15_RS05665 SM00220 Serine/Threonine protein kinases, catalytic domain SAEMRSA15_RS05665 SM00740 SAEMRSA15_RS05665 SAEMRSA15_RS05680 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SAEMRSA15_RS05695 SM01120 SAEMRSA15_RS05695 SAEMRSA15_RS05695 SM01121 SAEMRSA15_RS05695 SAEMRSA15_RS05700 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS05700 SM00490 helicase superfamily c-terminal domain SAEMRSA15_RS05715 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SAEMRSA15_RS05720 SM00822 SAEMRSA15_RS05720 SAEMRSA15_RS05735 SM00358 Double-stranded RNA binding motif SAEMRSA15_RS05735 SM00535 Ribonuclease III family SAEMRSA15_RS05740 SM00968 SMC proteins Flexible Hinge Domain SAEMRSA15_RS05745 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS05745 SM00962 SRP54-type protein, GTPase domain SAEMRSA15_RS05745 SM00963 SRP54-type protein, helical bundle domain SAEMRSA15_RS05755 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS05755 SM00962 SRP54-type protein, GTPase domain SAEMRSA15_RS05755 SM00963 SRP54-type protein, helical bundle domain SAEMRSA15_RS05805 SM00881 CoA binding domain SAEMRSA15_RS05810 SM00257 Lysin motif SAEMRSA15_RS05825 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SAEMRSA15_RS05825 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SAEMRSA15_RS05825 SM00493 SAEMRSA15_RS05825 SAEMRSA15_RS05845 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS05845 SM01086 C-terminal, D2-small domain, of ClpB protein SAEMRSA15_RS05905 SM00479 SAEMRSA15_RS05905 SAEMRSA15_RS05905 SM00481 DNA polymerase alpha chain like domain SAEMRSA15_RS05915 SM00316 Ribosomal protein S1-like RNA-binding domain SAEMRSA15_RS05915 SM00322 K homology RNA-binding domain SAEMRSA15_RS05945 SM00904 Riboflavin kinase SAEMRSA15_RS05950 SM01387 SAEMRSA15_RS05950 SAEMRSA15_RS05955 SM00316 Ribosomal protein S1-like RNA-binding domain SAEMRSA15_RS05955 SM00322 K homology RNA-binding domain SAEMRSA15_RS05960 SM00849 Metallo-beta-lactamase superfamily SAEMRSA15_RS05965 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS05965 SM00843 SAEMRSA15_RS05965 SAEMRSA15_RS05970 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAEMRSA15_RS05970 SM00866 SAEMRSA15_RS05970 SAEMRSA15_RS05995 SM00530 Helix-turn-helix XRE-family like proteins SAEMRSA15_RS06005 SM00852 Probable molybdopterin binding domain SAEMRSA15_RS06010 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS06015 SM00322 K homology RNA-binding domain SAEMRSA15_RS06015 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAEMRSA15_RS06060 SM00729 Elongator protein 3, MiaB family, Radical SAM SAEMRSA15_RS06075 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SAEMRSA15_RS06075 SM00534 ATPase domain of DNA mismatch repair MUTS family SAEMRSA15_RS06080 SM00853 MutL C terminal dimerisation domain SAEMRSA15_RS06080 SM01340 SAEMRSA15_RS06080 SAEMRSA15_RS06135 SM00422 helix_turn_helix, mercury resistance SAEMRSA15_RS06140 SM01230 SAEMRSA15_RS06140 SAEMRSA15_RS06275 SM00155 Phospholipase D. Active site motifs. SAEMRSA15_RS06280 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS06295 SM00421 helix_turn_helix, Lux Regulon SAEMRSA15_RS06295 SM00448 cheY-homologous receiver domain SAEMRSA15_RS06305 SM00318 Staphylococcal nuclease homologues SAEMRSA15_RS06360 SM01060 SAEMRSA15_RS06360 SAEMRSA15_RS06375 SM01240 SAEMRSA15_RS06375 SAEMRSA15_RS06405 SM00861 Transketolase, pyrimidine binding domain SAEMRSA15_RS06475 SM01207 SAEMRSA15_RS06475 SAEMRSA15_RS06480 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS06480 SM00433 TopoisomeraseII SAEMRSA15_RS06485 SM00434 DNA Topoisomerase IV SAEMRSA15_RS06500 SM01061 CAT RNA binding domain SAEMRSA15_RS06695 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS06700 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS06735 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS06760 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS06770 SM00859 Semialdehyde dehydrogenase, NAD binding domain SAEMRSA15_RS06775 SM01130 SAEMRSA15_RS06775 SAEMRSA15_RS06795 SM01005 Alanine racemase, C-terminal domain SAEMRSA15_RS06810 SM00357 Cold shock protein domain SAEMRSA15_RS06845 SM00327 von Willebrand factor (vWF) type A domain SAEMRSA15_RS06870 SM00861 Transketolase, pyrimidine binding domain SAEMRSA15_RS06880 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS06880 SM00388 His Kinase A (phosphoacceptor) domain SAEMRSA15_RS06885 SM00448 cheY-homologous receiver domain SAEMRSA15_RS06885 SM00862 Transcriptional regulatory protein, C terminal SAEMRSA15_RS06900 SM00014 Acid phosphatase homologues SAEMRSA15_RS06915 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SAEMRSA15_RS06915 SM00245 tail specific protease SAEMRSA15_RS06965 SM00567 E-Z type HEAT repeats SAEMRSA15_RS06965 SM00932 Scaffold protein Nfu/NifU N terminal SAEMRSA15_RS06970 SM00932 Scaffold protein Nfu/NifU N terminal SAEMRSA15_RS07015 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SAEMRSA15_RS07015 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SAEMRSA15_RS07020 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SAEMRSA15_RS07020 SM00475 5'-3' exonuclease SAEMRSA15_RS07045 SM00981 SAEMRSA15_RS07045 SAEMRSA15_RS07085 SM00478 endonuclease III SAEMRSA15_RS07085 SM00525 SAEMRSA15_RS07085 SAEMRSA15_RS07100 SM00479 SAEMRSA15_RS07100 SAEMRSA15_RS07100 SM00491 SAEMRSA15_RS07100 SAEMRSA15_RS07135 SM00914 SAEMRSA15_RS07135 SAEMRSA15_RS07140 SM00028 Tetratricopeptide repeats SAEMRSA15_RS07165 SM00562 SAEMRSA15_RS07165 SAEMRSA15_RS07190 SM00411 bacterial (prokaryotic) histone like domain SAEMRSA15_RS07205 SM00316 Ribosomal protein S1-like RNA-binding domain SAEMRSA15_RS07230 SM00870 SAEMRSA15_RS07230 SAEMRSA15_RS07245 SM00257 Lysin motif SAEMRSA15_RS07250 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS07250 SM00490 helicase superfamily c-terminal domain SAEMRSA15_RS07395 SM00635 Bacterial Ig-like domain 2 SAEMRSA15_RS07450 SM00507 HNH nucleases SAEMRSA15_RS07460 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS07465 SM00990 SAEMRSA15_RS07465 SAEMRSA15_RS07540 SM00482 DNA polymerase A domain SAEMRSA15_RS07610 SM00530 Helix-turn-helix XRE-family like proteins SAEMRSA15_RS07615 SM00530 Helix-turn-helix XRE-family like proteins SAEMRSA15_RS07665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SAEMRSA15_RS07665 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS07665 SM00388 His Kinase A (phosphoacceptor) domain SAEMRSA15_RS07670 SM00448 cheY-homologous receiver domain SAEMRSA15_RS07670 SM00862 Transcriptional regulatory protein, C terminal SAEMRSA15_RS07675 SM00363 S4 RNA-binding domain SAEMRSA15_RS07740 SM00342 helix_turn_helix, arabinose operon control protein SAEMRSA15_RS07740 SM00871 Bacterial transcription activator, effector binding domain SAEMRSA15_RS07745 SM00642 Alpha-amylase domain SAEMRSA15_RS07750 SM00354 helix_turn _helix lactose operon repressor SAEMRSA15_RS07765 SM01350 SAEMRSA15_RS07765 SAEMRSA15_RS07795 SM00861 Transketolase, pyrimidine binding domain SAEMRSA15_RS07845 SM00878 Biotin carboxylase C-terminal domain SAEMRSA15_RS07855 SM00841 Elongation factor P, C-terminal SAEMRSA15_RS07855 SM01185 SAEMRSA15_RS07855 SAEMRSA15_RS07880 SM00450 Rhodanese Homology Domain SAEMRSA15_RS07940 SM00849 Metallo-beta-lactamase superfamily SAEMRSA15_RS07995 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS08000 SM00518 AP endonuclease family 2 SAEMRSA15_RS08005 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS08005 SM00490 helicase superfamily c-terminal domain SAEMRSA15_RS08025 SM00400 zinc finger SAEMRSA15_RS08025 SM00493 SAEMRSA15_RS08025 SAEMRSA15_RS08035 SM00116 Domain in cystathionine beta-synthase and other proteins. SAEMRSA15_RS08095 SM00729 Elongator protein 3, MiaB family, Radical SAM SAEMRSA15_RS08110 SM00271 DnaJ molecular chaperone homology domain SAEMRSA15_RS08130 SM00729 Elongator protein 3, MiaB family, Radical SAM SAEMRSA15_RS08140 SM00838 Elongation factor G C-terminus SAEMRSA15_RS08155 SM00849 Metallo-beta-lactamase superfamily SAEMRSA15_RS08165 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAEMRSA15_RS08180 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAEMRSA15_RS08190 SM01103 SAEMRSA15_RS08190 SAEMRSA15_RS08245 SM00878 Biotin carboxylase C-terminal domain SAEMRSA15_RS08255 SM00797 Allophanate hydrolase subunit 2 SAEMRSA15_RS08260 SM00796 Allophanate hydrolase subunit 1 SAEMRSA15_RS08295 SM00732 Likely ribonuclease with RNase H fold. SAEMRSA15_RS08305 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SAEMRSA15_RS08310 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS08315 SM00028 Tetratricopeptide repeats SAEMRSA15_RS08350 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS08375 SM00287 Bacterial SH3 domain homologues SAEMRSA15_RS08375 SM00646 SAEMRSA15_RS08375 SAEMRSA15_RS08385 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAEMRSA15_RS08385 SM00954 Region found in RelA / SpoT proteins SAEMRSA15_RS08405 SM01323 SAEMRSA15_RS08405 SAEMRSA15_RS08420 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS08425 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAEMRSA15_RS08525 SM01004 Delta-aminolevulinic acid dehydratase SAEMRSA15_RS08555 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS08555 SM00994 ClpX C4-type zinc finger SAEMRSA15_RS08555 SM01086 C-terminal, D2-small domain, of ClpB protein SAEMRSA15_RS08605 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SAEMRSA15_RS08630 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAEMRSA15_RS08640 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SAEMRSA15_RS08640 SM01232 SAEMRSA15_RS08640 SAEMRSA15_RS08645 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SAEMRSA15_RS08645 SM00474 3'-5' exonuclease SAEMRSA15_RS08645 SM00475 5'-3' exonuclease SAEMRSA15_RS08645 SM00482 DNA polymerase A domain SAEMRSA15_RS08655 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS08655 SM00388 His Kinase A (phosphoacceptor) domain SAEMRSA15_RS08660 SM00448 cheY-homologous receiver domain SAEMRSA15_RS08660 SM00862 Transcriptional regulatory protein, C terminal SAEMRSA15_RS08670 SM01329 SAEMRSA15_RS08670 SAEMRSA15_RS08705 SM00919 Malic enzyme, NAD binding domain SAEMRSA15_RS08705 SM01274 SAEMRSA15_RS08705 SAEMRSA15_RS08710 SM00481 DNA polymerase alpha chain like domain SAEMRSA15_RS08720 SM00116 Domain in cystathionine beta-synthase and other proteins. SAEMRSA15_RS08730 SM00849 Metallo-beta-lactamase superfamily SAEMRSA15_RS08745 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SAEMRSA15_RS08745 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SAEMRSA15_RS08775 SM00981 SAEMRSA15_RS08775 SAEMRSA15_RS08795 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SAEMRSA15_RS08800 SM00363 S4 RNA-binding domain SAEMRSA15_RS08800 SM01390 SAEMRSA15_RS08800 SAEMRSA15_RS08845 SM00563 Phosphate acyltransferases SAEMRSA15_RS08850 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SAEMRSA15_RS08855 SM00363 S4 RNA-binding domain SAEMRSA15_RS08870 SM00725 NEAr Transporter domain SAEMRSA15_RS08900 SM00354 helix_turn _helix lactose operon repressor SAEMRSA15_RS08910 SM00830 Chorismate mutase type II SAEMRSA15_RS08935 SM00843 SAEMRSA15_RS08935 SAEMRSA15_RS08965 SM00849 Metallo-beta-lactamase superfamily SAEMRSA15_RS08995 SM00363 S4 RNA-binding domain SAEMRSA15_RS09015 SM00450 Rhodanese Homology Domain SAEMRSA15_RS09030 SM00729 Elongator protein 3, MiaB family, Radical SAM SAEMRSA15_RS09040 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS09090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SAEMRSA15_RS09100 SM00226 Low molecular weight phosphatase family SAEMRSA15_RS09120 SM00047 Lysozyme subfamily 2 SAEMRSA15_RS09220 SM01234 SAEMRSA15_RS09220 SAEMRSA15_RS09465 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS09490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAEMRSA15_RS09520 SM00530 Helix-turn-helix XRE-family like proteins SAEMRSA15_RS09525 SM00421 helix_turn_helix, Lux Regulon SAEMRSA15_RS09525 SM00448 cheY-homologous receiver domain SAEMRSA15_RS09575 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS09580 SM00062 Bacterial periplasmic substrate-binding proteins SAEMRSA15_RS09600 SM01321 SAEMRSA15_RS09600 SAEMRSA15_RS09785 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS09795 SM00478 endonuclease III SAEMRSA15_RS09865 SM00226 Low molecular weight phosphatase family SAEMRSA15_RS09880 SM00421 helix_turn_helix, Lux Regulon SAEMRSA15_RS09880 SM00448 cheY-homologous receiver domain SAEMRSA15_RS09885 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS09940 SM00479 SAEMRSA15_RS09940 SAEMRSA15_RS09960 SM00046 Diacylglycerol kinase catalytic domain (presumed) SAEMRSA15_RS09970 SM00845 GatB domain SAEMRSA15_RS09995 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAEMRSA15_RS09995 SM00292 breast cancer carboxy-terminal domain SAEMRSA15_RS09995 SM00532 Ligase N family SAEMRSA15_RS10015 SM00998 Adenylosuccinate lyase C-terminus SAEMRSA15_RS10085 SM00710 Parallel beta-helix repeats SAEMRSA15_RS10095 SM01131 SAEMRSA15_RS10095 SAEMRSA15_RS10190 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS10200 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS10205 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAEMRSA15_RS10265 SM00287 Bacterial SH3 domain homologues SAEMRSA15_RS10385 SM00507 HNH nucleases SAEMRSA15_RS10555 SM00530 Helix-turn-helix XRE-family like proteins SAEMRSA15_RS10560 SM00910 SAEMRSA15_RS10560 SAEMRSA15_RS10650 SM00883 Chaperonin 10 Kd subunit SAEMRSA15_RS10680 SM00793 Accessory gene regulator B SAEMRSA15_RS10685 SM00794 Staphylococcal AgrD protein SAEMRSA15_RS10695 SM00448 cheY-homologous receiver domain SAEMRSA15_RS10695 SM00850 LytTr DNA-binding domain SAEMRSA15_RS10710 SM00640 Glycosyl hydrolases family 32 SAEMRSA15_RS10715 SM00354 helix_turn _helix lactose operon repressor SAEMRSA15_RS10735 SM00881 CoA binding domain SAEMRSA15_RS10740 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS10755 SM00534 ATPase domain of DNA mismatch repair MUTS family SAEMRSA15_RS10805 SM00917 LeuA allosteric (dimerisation) domain SAEMRSA15_RS10810 SM01329 SAEMRSA15_RS10810 SAEMRSA15_RS10835 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS10865 SM00731 SprT homologues. SAEMRSA15_RS10870 SM00316 Ribosomal protein S1-like RNA-binding domain SAEMRSA15_RS10870 SM00732 Likely ribonuclease with RNase H fold. SAEMRSA15_RS10890 SM00331 Sigma factor PP2C-like phosphatases SAEMRSA15_RS10890 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SAEMRSA15_RS10910 SM01005 Alanine racemase, C-terminal domain SAEMRSA15_RS10955 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS10955 SM00388 His Kinase A (phosphoacceptor) domain SAEMRSA15_RS10960 SM00448 cheY-homologous receiver domain SAEMRSA15_RS10960 SM00862 Transcriptional regulatory protein, C terminal SAEMRSA15_RS10965 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS10965 SM00490 helicase superfamily c-terminal domain SAEMRSA15_RS11000 SM00155 Phospholipase D. Active site motifs. SAEMRSA15_RS11005 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAEMRSA15_RS11085 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS11145 SM00226 Low molecular weight phosphatase family SAEMRSA15_RS11160 SM00937 SAEMRSA15_RS11160 SAEMRSA15_RS11175 SM00357 Cold shock protein domain SAEMRSA15_RS11175 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS11175 SM00959 Rho termination factor, N-terminal domain SAEMRSA15_RS11250 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SAEMRSA15_RS11260 SM01133 SAEMRSA15_RS11260 SAEMRSA15_RS11300 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SAEMRSA15_RS11330 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS11540 SM00829 Enoylreductase SAEMRSA15_RS11545 SM00829 Enoylreductase SAEMRSA15_RS11570 SM01133 SAEMRSA15_RS11570 SAEMRSA15_RS11590 SM00420 helix_turn_helix, Deoxyribose operon repressor SAEMRSA15_RS11590 SM01134 SAEMRSA15_RS11590 SAEMRSA15_RS11620 SM00422 helix_turn_helix, mercury resistance SAEMRSA15_RS11700 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS11705 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS11715 SM00662 RNA polymerases D SAEMRSA15_RS11735 SM00316 Ribosomal protein S1-like RNA-binding domain SAEMRSA15_RS11790 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SAEMRSA15_RS11795 SM01374 SAEMRSA15_RS11795 SAEMRSA15_RS11815 SM00322 K homology RNA-binding domain SAEMRSA15_RS11830 SM01382 SAEMRSA15_RS11830 SAEMRSA15_RS11830 SM01383 SAEMRSA15_RS11830 SAEMRSA15_RS11850 SM01403 SAEMRSA15_RS11850 SAEMRSA15_RS11865 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SAEMRSA15_RS11865 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SAEMRSA15_RS11865 SM00493 SAEMRSA15_RS11865 SAEMRSA15_RS11925 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS11950 SM00729 Elongator protein 3, MiaB family, Radical SAM SAEMRSA15_RS11975 SM00852 Probable molybdopterin binding domain SAEMRSA15_RS11985 SM00852 Probable molybdopterin binding domain SAEMRSA15_RS11995 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS12060 SM00988 UreE urease accessory protein, N-terminal domain SAEMRSA15_RS12100 SM00342 helix_turn_helix, arabinose operon control protein SAEMRSA15_RS12150 SM00047 Lysozyme subfamily 2 SAEMRSA15_RS12165 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SAEMRSA15_RS12165 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SAEMRSA15_RS12180 SM00420 helix_turn_helix, Deoxyribose operon repressor SAEMRSA15_RS12325 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS12405 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS12415 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS12425 SM00448 cheY-homologous receiver domain SAEMRSA15_RS12425 SM00862 Transcriptional regulatory protein, C terminal SAEMRSA15_RS12430 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SAEMRSA15_RS12430 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS12430 SM00388 His Kinase A (phosphoacceptor) domain SAEMRSA15_RS12435 SM00850 LytTr DNA-binding domain SAEMRSA15_RS12450 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS12485 SM00829 Enoylreductase SAEMRSA15_RS12540 SM00342 helix_turn_helix, arabinose operon control protein SAEMRSA15_RS12565 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS12585 SM00422 helix_turn_helix, mercury resistance SAEMRSA15_RS12590 SM00421 helix_turn_helix, Lux Regulon SAEMRSA15_RS12590 SM00448 cheY-homologous receiver domain SAEMRSA15_RS12595 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS12620 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SAEMRSA15_RS12700 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS12710 SM00062 Bacterial periplasmic substrate-binding proteins SAEMRSA15_RS12710 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SAEMRSA15_RS12725 SM00855 Phosphoglycerate mutase family SAEMRSA15_RS12780 SM00729 Elongator protein 3, MiaB family, Radical SAM SAEMRSA15_RS12780 SM00876 Biotin and Thiamin Synthesis associated domain SAEMRSA15_RS12815 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS12820 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS12855 SM00871 Bacterial transcription activator, effector binding domain SAEMRSA15_RS12935 SM00116 Domain in cystathionine beta-synthase and other proteins. SAEMRSA15_RS12935 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS12975 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS13020 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS13025 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS13110 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS13160 SM00487 DEAD-like helicases superfamily SAEMRSA15_RS13160 SM00490 helicase superfamily c-terminal domain SAEMRSA15_RS13240 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAEMRSA15_RS13240 SM00895 SAEMRSA15_RS13240 SAEMRSA15_RS13245 SM00422 helix_turn_helix, mercury resistance SAEMRSA15_RS13250 SM00954 Region found in RelA / SpoT proteins SAEMRSA15_RS13285 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS13290 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS13325 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS13360 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS13495 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS13495 SM01086 C-terminal, D2-small domain, of ClpB protein SAEMRSA15_RS13510 SM00899 SAEMRSA15_RS13510 SAEMRSA15_RS13535 SM01266 SAEMRSA15_RS13535 SAEMRSA15_RS13670 SM00829 Enoylreductase SAEMRSA15_RS13740 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SAEMRSA15_RS13780 SM01321 SAEMRSA15_RS13780 SAEMRSA15_RS13935 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS13940 SM00387 Histidine kinase-like ATPases SAEMRSA15_RS13945 SM00448 cheY-homologous receiver domain SAEMRSA15_RS13945 SM00862 Transcriptional regulatory protein, C terminal SAEMRSA15_RS13960 SM00098 Alkaline phosphatase homologues SAEMRSA15_RS13965 SM00347 helix_turn_helix multiple antibiotic resistance protein SAEMRSA15_RS14050 SM00047 Lysozyme subfamily 2 SAEMRSA15_RS14075 SM00957 SecA DEAD-like domain SAEMRSA15_RS14075 SM00958 SecA preprotein cross-linking domain SAEMRSA15_RS14105 SM00903 Flavin reductase like domain SAEMRSA15_RS14125 SM00903 Flavin reductase like domain SAEMRSA15_RS14240 SM00867 YceI-like domain SAEMRSA15_RS14255 SM00450 Rhodanese Homology Domain SAEMRSA15_RS14305 SM00382 ATPases associated with a variety of cellular activities SAEMRSA15_RS14320 SM00357 Cold shock protein domain SAEMRSA15_RS14325 SM00530 Helix-turn-helix XRE-family like proteins SAEMRSA15_RS14340 SM01321 SAEMRSA15_RS14340 SAEMRSA15_RS14345 SM00470 ParB-like nuclease domain SAEMRSA15_RS14355 SM01228 SAEMRSA15_RS14355