SAURJH9_RS00005	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS00005	SM00760	Bacterial dnaA protein helix-turn-helix domain
SAURJH9_RS00010	SM00480	DNA polymerase III beta subunit
SAURJH9_RS00025	SM00387	Histidine kinase-like ATPases
SAURJH9_RS00025	SM00433	TopoisomeraseII
SAURJH9_RS00030	SM00434	DNA Topoisomerase IV
SAURJH9_RS00070	SM00267	diguanylate cyclase
SAURJH9_RS00085	SM00788	Adenylosuccinate synthetase
SAURJH9_RS00100	SM00448	cheY-homologous receiver domain
SAURJH9_RS00100	SM00862	Transcriptional regulatory protein, C terminal
SAURJH9_RS00105	SM00091	PAS domain
SAURJH9_RS00105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAURJH9_RS00105	SM00387	Histidine kinase-like ATPases
SAURJH9_RS00105	SM00388	His Kinase A (phosphoacceptor) domain
SAURJH9_RS00120	SM00849	Metallo-beta-lactamase superfamily
SAURJH9_RS00180	SM00450	Rhodanese Homology Domain
SAURJH9_RS00185	SM00849	Metallo-beta-lactamase superfamily
SAURJH9_RS00190	SM00450	Rhodanese Homology Domain
SAURJH9_RS00210	SM00650	Ribosomal RNA adenine dimethylases
SAURJH9_RS00255	SM00857	Resolvase, N terminal domain
SAURJH9_RS00260	SM00857	Resolvase, N terminal domain
SAURJH9_RS00295	SM00448	cheY-homologous receiver domain
SAURJH9_RS00295	SM00862	Transcriptional regulatory protein, C terminal
SAURJH9_RS00300	SM00387	Histidine kinase-like ATPases
SAURJH9_RS00300	SM00388	His Kinase A (phosphoacceptor) domain
SAURJH9_RS00385	SM00450	Rhodanese Homology Domain
SAURJH9_RS00390	SM00450	Rhodanese Homology Domain
SAURJH9_RS00390	SM00849	Metallo-beta-lactamase superfamily
SAURJH9_RS00440	SM00148	Phospholipase C, catalytic domain (part); domain X
SAURJH9_RS00470	SM00342	helix_turn_helix, arabinose operon control protein
SAURJH9_RS00500	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAURJH9_RS00515	SM00257	Lysin motif
SAURJH9_RS00520	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAURJH9_RS00580	SM00470	ParB-like nuclease domain
SAURJH9_RS00595	SM00822	SAURJH9_RS00595
SAURJH9_RS00640	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAURJH9_RS00660	SM01133	SAURJH9_RS00660
SAURJH9_RS00680	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS00685	SM00062	Bacterial periplasmic substrate-binding proteins
SAURJH9_RS00705	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS00785	SM00984	UDP binding domain
SAURJH9_RS00825	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS00885	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SAURJH9_RS00945	SM00487	DEAD-like helicases superfamily
SAURJH9_RS00960	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS00985	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS00990	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS00995	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS01035	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS01080	SM00342	helix_turn_helix, arabinose operon control protein
SAURJH9_RS01080	SM00448	cheY-homologous receiver domain
SAURJH9_RS01150	SM00882	Coenzyme A transferase
SAURJH9_RS01230	SM00829	Enoylreductase
SAURJH9_RS01240	SM00829	Enoylreductase
SAURJH9_RS01290	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAURJH9_RS01290	SM00387	Histidine kinase-like ATPases
SAURJH9_RS01295	SM00448	cheY-homologous receiver domain
SAURJH9_RS01295	SM00850	LytTr DNA-binding domain
SAURJH9_RS01310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAURJH9_RS01310	SM00866	SAURJH9_RS01310
SAURJH9_RS01350	SM00354	helix_turn _helix lactose operon repressor
SAURJH9_RS01380	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS01540	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS01570	SM01130	SAURJH9_RS01570
SAURJH9_RS01620	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS01625	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS01635	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS01810	SM00959	Rho termination factor, N-terminal domain
SAURJH9_RS01890	SM00047	Lysozyme subfamily 2
SAURJH9_RS01910	SM00287	Bacterial SH3 domain homologues
SAURJH9_RS01910	SM00644	SAURJH9_RS01910
SAURJH9_RS01945	SM00506	Appr-1"-p processing enzyme
SAURJH9_RS01985	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAURJH9_RS02065	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS02075	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS02125	SM00470	ParB-like nuclease domain
SAURJH9_RS02205	SM00855	Phosphoglycerate mutase family
SAURJH9_RS02275	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAURJH9_RS02275	SM01240	SAURJH9_RS02275
SAURJH9_RS02470	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SAURJH9_RS02500	SM00014	Acid phosphatase homologues
SAURJH9_RS02525	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS02525	SM00930	SAURJH9_RS02525
SAURJH9_RS02540	SM00257	Lysin motif
SAURJH9_RS02595	SM00642	Alpha-amylase domain
SAURJH9_RS02600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAURJH9_RS02600	SM00866	SAURJH9_RS02600
SAURJH9_RS02615	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS02625	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAURJH9_RS02625	SM00493	SAURJH9_RS02625
SAURJH9_RS02690	SM00465	GIY-YIG type nucleases (URI domain)
SAURJH9_RS02715	SM00493	SAURJH9_RS02715
SAURJH9_RS02720	SM00650	Ribosomal RNA adenine dimethylases
SAURJH9_RS02760	SM01400	SAURJH9_RS02760
SAURJH9_RS02780	SM00487	DEAD-like helicases superfamily
SAURJH9_RS02780	SM00490	helicase superfamily c-terminal domain
SAURJH9_RS02780	SM00982	SAURJH9_RS02780
SAURJH9_RS02780	SM01058	CarD-like/TRCF domain
SAURJH9_RS02795	SM00363	S4 RNA-binding domain
SAURJH9_RS02805	SM00316	Ribosomal protein S1-like RNA-binding domain
SAURJH9_RS02810	SM00977	TilS substrate C-terminal domain
SAURJH9_RS02820	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS02840	SM00905	Dihydroneopterin aldolase
SAURJH9_RS02935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAURJH9_RS02970	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS02970	SM01086	C-terminal, D2-small domain, of ClpB protein
SAURJH9_RS02980	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS02985	SM00670	Large family of predicted nucleotide-binding domains
SAURJH9_RS03000	SM00840	SAURJH9_RS03000
SAURJH9_RS03010	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SAURJH9_RS03030	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
SAURJH9_RS03030	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SAURJH9_RS03035	SM00649	Ribosomal protein L11/L12
SAURJH9_RS03065	SM00663	RNA polymerase I subunit A N-terminus
SAURJH9_RS03085	SM00838	Elongation factor G C-terminus
SAURJH9_RS03085	SM00889	Elongation factor G, domain IV
SAURJH9_RS03200	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SAURJH9_RS03250	SM00986	Uracil DNA glycosylase superfamily
SAURJH9_RS03250	SM00987	UreE urease accessory protein, C-terminal domain 
SAURJH9_RS03365	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAURJH9_RS03375	SM00829	Enoylreductase
SAURJH9_RS03390	SM00836	DALR anticodon binding domain
SAURJH9_RS03390	SM01016	Arginyl tRNA synthetase N terminal dom
SAURJH9_RS03395	SM00478	endonuclease III
SAURJH9_RS03515	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS03520	SM00529	Helix-turn-helix diphteria tox regulatory element
SAURJH9_RS03520	SM00899	SAURJH9_RS03520
SAURJH9_RS03535	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS03565	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS03585	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS03605	SM01120	SAURJH9_RS03605
SAURJH9_RS03650	SM00448	cheY-homologous receiver domain
SAURJH9_RS03650	SM00862	Transcriptional regulatory protein, C terminal
SAURJH9_RS03655	SM00387	Histidine kinase-like ATPases
SAURJH9_RS03660	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS03685	SM00257	Lysin motif
SAURJH9_RS03695	SM00342	helix_turn_helix, arabinose operon control protein
SAURJH9_RS03785	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS03790	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS03795	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAURJH9_RS03800	SM00833	Cobalamin synthesis protein cobW C-terminal domain
SAURJH9_RS03855	SM00420	helix_turn_helix, Deoxyribose operon repressor
SAURJH9_RS03855	SM01134	SAURJH9_RS03855
SAURJH9_RS03880	SM01091	Transporter associated domain
SAURJH9_RS03895	SM00387	Histidine kinase-like ATPases
SAURJH9_RS03895	SM00388	His Kinase A (phosphoacceptor) domain
SAURJH9_RS03900	SM00448	cheY-homologous receiver domain
SAURJH9_RS03900	SM00862	Transcriptional regulatory protein, C terminal
SAURJH9_RS03955	SM00796	Allophanate hydrolase subunit 1
SAURJH9_RS03960	SM00797	Allophanate hydrolase subunit 2
SAURJH9_RS03975	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS03980	SM00341	Helicase and RNase D C-terminal
SAURJH9_RS03980	SM00487	DEAD-like helicases superfamily
SAURJH9_RS03980	SM00490	helicase superfamily c-terminal domain
SAURJH9_RS03980	SM00956	SAURJH9_RS03980
SAURJH9_RS03985	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS04010	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SAURJH9_RS04065	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS04120	SM00267	diguanylate cyclase
SAURJH9_RS04140	SM00487	DEAD-like helicases superfamily
SAURJH9_RS04140	SM00490	helicase superfamily c-terminal domain
SAURJH9_RS04155	SM00957	SecA DEAD-like domain
SAURJH9_RS04155	SM00958	SecA preprotein cross-linking domain
SAURJH9_RS04165	SM00937	SAURJH9_RS04165
SAURJH9_RS04175	SM00257	Lysin motif
SAURJH9_RS04190	SM00487	DEAD-like helicases superfamily
SAURJH9_RS04190	SM00490	helicase superfamily c-terminal domain
SAURJH9_RS04215	SM00028	Tetratricopeptide repeats
SAURJH9_RS04270	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SAURJH9_RS04290	SM01192	SAURJH9_RS04290
SAURJH9_RS04290	SM01193	SAURJH9_RS04290
SAURJH9_RS04310	SM00316	Ribosomal protein S1-like RNA-binding domain
SAURJH9_RS04310	SM00357	Cold shock protein domain
SAURJH9_RS04310	SM00955	SAURJH9_RS04310
SAURJH9_RS04375	SM00318	Staphylococcal nuclease homologues
SAURJH9_RS04380	SM00357	Cold shock protein domain
SAURJH9_RS04420	SM00855	Phosphoglycerate mutase family
SAURJH9_RS04480	SM00493	SAURJH9_RS04480
SAURJH9_RS04490	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS04490	SM00930	SAURJH9_RS04490
SAURJH9_RS04515	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS04565	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS04570	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS04575	SM01040	BRO family, N-terminal domain
SAURJH9_RS04855	SM00047	Lysozyme subfamily 2
SAURJH9_RS04875	SM00646	SAURJH9_RS04875
SAURJH9_RS04940	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAURJH9_RS05090	SM01298	SAURJH9_RS05090
SAURJH9_RS05100	SM00316	Ribosomal protein S1-like RNA-binding domain
SAURJH9_RS05115	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
SAURJH9_RS05195	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS05195	SM01086	C-terminal, D2-small domain, of ClpB protein
SAURJH9_RS05240	SM00825	Beta-ketoacyl synthase
SAURJH9_RS05260	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS05265	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS05280	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS05285	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS05335	SM01118	SAURJH9_RS05335
SAURJH9_RS05345	SM00954	Region found in RelA / SpoT proteins
SAURJH9_RS05360	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAURJH9_RS05360	SM00924	MgtE intracellular N domain
SAURJH9_RS05450	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS05520	SM00482	DNA polymerase A domain
SAURJH9_RS05605	SM00990	SAURJH9_RS05605
SAURJH9_RS05610	SM00487	DEAD-like helicases superfamily
SAURJH9_RS05620	SM00507	HNH nucleases
SAURJH9_RS05675	SM00635	Bacterial Ig-like domain 2
SAURJH9_RS05740	SM00287	Bacterial SH3 domain homologues
SAURJH9_RS05740	SM00644	SAURJH9_RS05740
SAURJH9_RS05745	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAURJH9_RS05775	SM00914	SAURJH9_RS05775
SAURJH9_RS05815	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS05900	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAURJH9_RS05910	SM00047	Lysozyme subfamily 2
SAURJH9_RS05910	SM00644	SAURJH9_RS05910
SAURJH9_RS05970	SM01001	AIR carboxylase
SAURJH9_RS05990	SM01211	SAURJH9_RS05990
SAURJH9_RS06015	SM00798	AICARFT/IMPCHase bienzyme
SAURJH9_RS06015	SM00851	MGS-like domain
SAURJH9_RS06020	SM01209	SAURJH9_RS06020
SAURJH9_RS06020	SM01210	SAURJH9_RS06020
SAURJH9_RS06030	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS06095	SM00849	Metallo-beta-lactamase superfamily
SAURJH9_RS06125	SM00861	Transketolase, pyrimidine binding domain
SAURJH9_RS06145	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS06150	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS06200	SM00838	Elongation factor G C-terminus
SAURJH9_RS06225	SM00878	Biotin carboxylase C-terminal domain
SAURJH9_RS06305	SM00725	NEAr Transporter domain
SAURJH9_RS06310	SM00725	NEAr Transporter domain
SAURJH9_RS06315	SM00725	NEAr Transporter domain
SAURJH9_RS06350	SM00967	RNA 2'-O ribose methyltransferase substrate binding
SAURJH9_RS06360	SM00873	B3/4 domain
SAURJH9_RS06360	SM00874	tRNA synthetase B5 domain
SAURJH9_RS06360	SM00896	Ferredoxin-fold anticodon binding domain
SAURJH9_RS06380	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAURJH9_RS06380	SM00481	DNA polymerase alpha chain like domain
SAURJH9_RS06380	SM00483	DNA polymerase X family
SAURJH9_RS06385	SM00463	Small MutS-related domain
SAURJH9_RS06385	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SAURJH9_RS06385	SM00534	ATPase domain of DNA mismatch repair MUTS family
SAURJH9_RS06400	SM00465	GIY-YIG type nucleases (URI domain)
SAURJH9_RS06605	SM00740	SAURJH9_RS06605
SAURJH9_RS06625	SM00842	Cell division protein FtsA
SAURJH9_RS06630	SM00864	Tubulin/FtsZ family, GTPase domain
SAURJH9_RS06630	SM00865	Tubulin/FtsZ family, C-terminal domain
SAURJH9_RS06655	SM00363	S4 RNA-binding domain
SAURJH9_RS06685	SM00363	S4 RNA-binding domain
SAURJH9_RS06710	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
SAURJH9_RS06715	SM00851	MGS-like domain
SAURJH9_RS06715	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
SAURJH9_RS06715	SM01209	SAURJH9_RS06715
SAURJH9_RS06720	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
SAURJH9_RS06745	SM00072	Guanylate kinase homologues.
SAURJH9_RS06750	SM01409	SAURJH9_RS06750
SAURJH9_RS06760	SM00487	DEAD-like helicases superfamily
SAURJH9_RS06760	SM00490	helicase superfamily c-terminal domain
SAURJH9_RS06795	SM00331	Sigma factor PP2C-like phosphatases
SAURJH9_RS06795	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SAURJH9_RS06800	SM00220	Serine/Threonine protein kinases, catalytic domain
SAURJH9_RS06800	SM00740	SAURJH9_RS06800
SAURJH9_RS06815	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
SAURJH9_RS06830	SM01120	SAURJH9_RS06830
SAURJH9_RS06830	SM01121	SAURJH9_RS06830
SAURJH9_RS06835	SM00487	DEAD-like helicases superfamily
SAURJH9_RS06835	SM00490	helicase superfamily c-terminal domain
SAURJH9_RS06850	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
SAURJH9_RS06855	SM00822	SAURJH9_RS06855
SAURJH9_RS06870	SM00358	Double-stranded RNA binding motif
SAURJH9_RS06870	SM00535	Ribonuclease III family
SAURJH9_RS06875	SM00968	SMC proteins Flexible Hinge Domain
SAURJH9_RS06880	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS06880	SM00962	SRP54-type protein, GTPase domain
SAURJH9_RS06880	SM00963	SRP54-type protein, helical bundle domain
SAURJH9_RS06890	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS06890	SM00962	SRP54-type protein, GTPase domain
SAURJH9_RS06890	SM00963	SRP54-type protein, helical bundle domain
SAURJH9_RS06940	SM00881	CoA binding domain
SAURJH9_RS06945	SM00257	Lysin motif
SAURJH9_RS06965	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SAURJH9_RS06965	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SAURJH9_RS06965	SM00493	SAURJH9_RS06965
SAURJH9_RS06985	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS06985	SM01086	C-terminal, D2-small domain, of ClpB protein
SAURJH9_RS07045	SM00479	SAURJH9_RS07045
SAURJH9_RS07045	SM00481	DNA polymerase alpha chain like domain
SAURJH9_RS07055	SM00316	Ribosomal protein S1-like RNA-binding domain
SAURJH9_RS07055	SM00322	K homology RNA-binding domain
SAURJH9_RS07085	SM00904	Riboflavin kinase
SAURJH9_RS07090	SM01387	SAURJH9_RS07090
SAURJH9_RS07095	SM00316	Ribosomal protein S1-like RNA-binding domain
SAURJH9_RS07095	SM00322	K homology RNA-binding domain
SAURJH9_RS07100	SM00849	Metallo-beta-lactamase superfamily
SAURJH9_RS07105	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS07105	SM00843	SAURJH9_RS07105
SAURJH9_RS07110	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAURJH9_RS07110	SM00866	SAURJH9_RS07110
SAURJH9_RS07135	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS07145	SM00852	Probable molybdopterin binding domain
SAURJH9_RS07150	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS07155	SM00322	K homology RNA-binding domain
SAURJH9_RS07155	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAURJH9_RS07185	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAURJH9_RS07200	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
SAURJH9_RS07200	SM00534	ATPase domain of DNA mismatch repair MUTS family
SAURJH9_RS07260	SM00422	helix_turn_helix, mercury resistance
SAURJH9_RS07265	SM01230	SAURJH9_RS07265
SAURJH9_RS07335	SM00155	Phospholipase D. Active site motifs.
SAURJH9_RS07340	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS07355	SM00421	helix_turn_helix, Lux Regulon
SAURJH9_RS07355	SM00448	cheY-homologous receiver domain
SAURJH9_RS07365	SM00318	Staphylococcal nuclease homologues
SAURJH9_RS07420	SM01060	SAURJH9_RS07420
SAURJH9_RS07435	SM01240	SAURJH9_RS07435
SAURJH9_RS07465	SM00861	Transketolase, pyrimidine binding domain
SAURJH9_RS07520	SM01207	SAURJH9_RS07520
SAURJH9_RS07525	SM00387	Histidine kinase-like ATPases
SAURJH9_RS07525	SM00433	TopoisomeraseII
SAURJH9_RS07530	SM00434	DNA Topoisomerase IV
SAURJH9_RS07545	SM01061	CAT RNA binding domain
SAURJH9_RS07655	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS07660	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS07695	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS07730	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS07740	SM00859	Semialdehyde dehydrogenase, NAD binding domain
SAURJH9_RS07745	SM01130	SAURJH9_RS07745
SAURJH9_RS07765	SM01005	Alanine racemase, C-terminal domain
SAURJH9_RS07780	SM00357	Cold shock protein domain
SAURJH9_RS07815	SM00327	von Willebrand factor (vWF) type A domain
SAURJH9_RS07840	SM00861	Transketolase, pyrimidine binding domain
SAURJH9_RS07845	SM00387	Histidine kinase-like ATPases
SAURJH9_RS07845	SM00388	His Kinase A (phosphoacceptor) domain
SAURJH9_RS07850	SM00448	cheY-homologous receiver domain
SAURJH9_RS07850	SM00862	Transcriptional regulatory protein, C terminal
SAURJH9_RS07860	SM00014	Acid phosphatase homologues
SAURJH9_RS07875	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAURJH9_RS07875	SM00245	tail specific protease
SAURJH9_RS07925	SM00567	E-Z type HEAT repeats
SAURJH9_RS07925	SM00932	Scaffold protein Nfu/NifU N terminal
SAURJH9_RS07930	SM00932	Scaffold protein Nfu/NifU N terminal
SAURJH9_RS07960	SM00844	GA module
SAURJH9_RS07980	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SAURJH9_RS07980	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SAURJH9_RS07985	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SAURJH9_RS07985	SM00475	5'-3' exonuclease
SAURJH9_RS08010	SM00981	SAURJH9_RS08010
SAURJH9_RS08050	SM00478	endonuclease III
SAURJH9_RS08050	SM00525	SAURJH9_RS08050
SAURJH9_RS08065	SM00479	SAURJH9_RS08065
SAURJH9_RS08065	SM00491	SAURJH9_RS08065
SAURJH9_RS08100	SM00914	SAURJH9_RS08100
SAURJH9_RS08105	SM00028	Tetratricopeptide repeats
SAURJH9_RS08130	SM00562	SAURJH9_RS08130
SAURJH9_RS08155	SM00411	bacterial (prokaryotic) histone like domain
SAURJH9_RS08170	SM00316	Ribosomal protein S1-like RNA-binding domain
SAURJH9_RS08195	SM00870	SAURJH9_RS08195
SAURJH9_RS08210	SM00257	Lysin motif
SAURJH9_RS08215	SM00487	DEAD-like helicases superfamily
SAURJH9_RS08215	SM00490	helicase superfamily c-terminal domain
SAURJH9_RS08270	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAURJH9_RS08270	SM00387	Histidine kinase-like ATPases
SAURJH9_RS08270	SM00388	His Kinase A (phosphoacceptor) domain
SAURJH9_RS08275	SM00448	cheY-homologous receiver domain
SAURJH9_RS08275	SM00862	Transcriptional regulatory protein, C terminal
SAURJH9_RS08280	SM00363	S4 RNA-binding domain
SAURJH9_RS08345	SM00342	helix_turn_helix, arabinose operon control protein
SAURJH9_RS08345	SM00871	Bacterial transcription activator, effector binding domain
SAURJH9_RS08350	SM00642	Alpha-amylase domain
SAURJH9_RS08355	SM00354	helix_turn _helix lactose operon repressor
SAURJH9_RS08375	SM01350	SAURJH9_RS08375
SAURJH9_RS08405	SM00861	Transketolase, pyrimidine binding domain
SAURJH9_RS08455	SM00878	Biotin carboxylase C-terminal domain
SAURJH9_RS08465	SM00841	Elongation factor P, C-terminal
SAURJH9_RS08465	SM01185	SAURJH9_RS08465
SAURJH9_RS08490	SM00450	Rhodanese Homology Domain
SAURJH9_RS08550	SM00849	Metallo-beta-lactamase superfamily
SAURJH9_RS08605	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS08610	SM00518	AP endonuclease family 2
SAURJH9_RS08615	SM00487	DEAD-like helicases superfamily
SAURJH9_RS08615	SM00490	helicase superfamily c-terminal domain
SAURJH9_RS08635	SM00400	zinc finger
SAURJH9_RS08635	SM00493	SAURJH9_RS08635
SAURJH9_RS08645	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAURJH9_RS08705	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAURJH9_RS08720	SM00271	DnaJ molecular chaperone homology domain
SAURJH9_RS08740	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAURJH9_RS08750	SM00838	Elongation factor G C-terminus
SAURJH9_RS08765	SM00849	Metallo-beta-lactamase superfamily
SAURJH9_RS08775	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAURJH9_RS08790	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAURJH9_RS08800	SM01103	SAURJH9_RS08800
SAURJH9_RS08865	SM00878	Biotin carboxylase C-terminal domain
SAURJH9_RS08875	SM00797	Allophanate hydrolase subunit 2
SAURJH9_RS08880	SM00796	Allophanate hydrolase subunit 1
SAURJH9_RS08915	SM00732	Likely ribonuclease with RNase H fold.
SAURJH9_RS08925	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SAURJH9_RS08930	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS08935	SM00028	Tetratricopeptide repeats
SAURJH9_RS08970	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS08995	SM00287	Bacterial SH3 domain homologues
SAURJH9_RS08995	SM00646	SAURJH9_RS08995
SAURJH9_RS09005	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAURJH9_RS09005	SM00954	Region found in RelA / SpoT proteins
SAURJH9_RS09025	SM01323	SAURJH9_RS09025
SAURJH9_RS09040	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS09045	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAURJH9_RS09105	SM00650	Ribosomal RNA adenine dimethylases
SAURJH9_RS09175	SM01004	Delta-aminolevulinic acid dehydratase
SAURJH9_RS09205	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS09205	SM00994	ClpX C4-type zinc finger
SAURJH9_RS09205	SM01086	C-terminal, D2-small domain, of ClpB protein
SAURJH9_RS09255	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
SAURJH9_RS09280	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
SAURJH9_RS09290	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
SAURJH9_RS09290	SM01232	SAURJH9_RS09290
SAURJH9_RS09295	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
SAURJH9_RS09295	SM00474	3'-5' exonuclease
SAURJH9_RS09295	SM00475	5'-3' exonuclease
SAURJH9_RS09295	SM00482	DNA polymerase A domain
SAURJH9_RS09305	SM00387	Histidine kinase-like ATPases
SAURJH9_RS09305	SM00388	His Kinase A (phosphoacceptor) domain
SAURJH9_RS09310	SM00448	cheY-homologous receiver domain
SAURJH9_RS09310	SM00862	Transcriptional regulatory protein, C terminal
SAURJH9_RS09320	SM01329	SAURJH9_RS09320
SAURJH9_RS09355	SM00919	Malic enzyme, NAD binding domain
SAURJH9_RS09355	SM01274	SAURJH9_RS09355
SAURJH9_RS09360	SM00481	DNA polymerase alpha chain like domain
SAURJH9_RS09370	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAURJH9_RS09380	SM00849	Metallo-beta-lactamase superfamily
SAURJH9_RS09395	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
SAURJH9_RS09395	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
SAURJH9_RS09425	SM00981	SAURJH9_RS09425
SAURJH9_RS09445	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
SAURJH9_RS09450	SM00363	S4 RNA-binding domain
SAURJH9_RS09450	SM01390	SAURJH9_RS09450
SAURJH9_RS09495	SM00563	Phosphate acyltransferases
SAURJH9_RS09500	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
SAURJH9_RS09505	SM00363	S4 RNA-binding domain
SAURJH9_RS09520	SM00725	NEAr Transporter domain
SAURJH9_RS09550	SM00354	helix_turn _helix lactose operon repressor
SAURJH9_RS09560	SM00830	Chorismate mutase type II
SAURJH9_RS09585	SM00843	SAURJH9_RS09585
SAURJH9_RS09615	SM00849	Metallo-beta-lactamase superfamily
SAURJH9_RS09645	SM00363	S4 RNA-binding domain
SAURJH9_RS09665	SM00450	Rhodanese Homology Domain
SAURJH9_RS09680	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAURJH9_RS09690	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAURJH9_RS09735	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SAURJH9_RS09745	SM00047	Lysozyme subfamily 2
SAURJH9_RS09845	SM01234	SAURJH9_RS09845
SAURJH9_RS09865	SM00894	Excalibur calcium-binding domain
SAURJH9_RS10120	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS10145	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAURJH9_RS10180	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS10185	SM00421	helix_turn_helix, Lux Regulon
SAURJH9_RS10185	SM00448	cheY-homologous receiver domain
SAURJH9_RS10230	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS10235	SM00062	Bacterial periplasmic substrate-binding proteins
SAURJH9_RS10430	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS10440	SM00478	endonuclease III
SAURJH9_RS10510	SM00226	Low molecular weight phosphatase family
SAURJH9_RS10525	SM00421	helix_turn_helix, Lux Regulon
SAURJH9_RS10525	SM00448	cheY-homologous receiver domain
SAURJH9_RS10530	SM00387	Histidine kinase-like ATPases
SAURJH9_RS10585	SM00479	SAURJH9_RS10585
SAURJH9_RS10605	SM00046	Diacylglycerol kinase catalytic domain (presumed)
SAURJH9_RS10615	SM00845	GatB domain
SAURJH9_RS10640	SM00278	Helix-hairpin-helix DNA-binding motif class 1
SAURJH9_RS10640	SM00292	breast cancer carboxy-terminal domain
SAURJH9_RS10640	SM00532	Ligase N family
SAURJH9_RS10660	SM00998	Adenylosuccinate lyase C-terminus
SAURJH9_RS10715	SM00710	Parallel beta-helix repeats
SAURJH9_RS10725	SM01131	SAURJH9_RS10725
SAURJH9_RS10785	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS10795	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS10800	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAURJH9_RS10860	SM00287	Bacterial SH3 domain homologues
SAURJH9_RS10985	SM00507	HNH nucleases
SAURJH9_RS11130	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS11135	SM00910	SAURJH9_RS11135
SAURJH9_RS11190	SM00883	Chaperonin 10 Kd subunit
SAURJH9_RS11220	SM00793	Accessory gene regulator B
SAURJH9_RS11225	SM00794	Staphylococcal AgrD protein
SAURJH9_RS11235	SM00448	cheY-homologous receiver domain
SAURJH9_RS11235	SM00850	LytTr DNA-binding domain
SAURJH9_RS11250	SM00640	Glycosyl hydrolases family 32
SAURJH9_RS11255	SM00354	helix_turn _helix lactose operon repressor
SAURJH9_RS11275	SM00881	CoA binding domain
SAURJH9_RS11280	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS11290	SM00534	ATPase domain of DNA mismatch repair MUTS family
SAURJH9_RS11340	SM00917	LeuA allosteric (dimerisation) domain
SAURJH9_RS11345	SM01329	SAURJH9_RS11345
SAURJH9_RS11390	SM00731	SprT homologues.
SAURJH9_RS11395	SM00316	Ribosomal protein S1-like RNA-binding domain
SAURJH9_RS11395	SM00732	Likely ribonuclease with RNase H fold.
SAURJH9_RS11415	SM00331	Sigma factor PP2C-like phosphatases
SAURJH9_RS11415	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
SAURJH9_RS11435	SM01005	Alanine racemase, C-terminal domain
SAURJH9_RS11480	SM00387	Histidine kinase-like ATPases
SAURJH9_RS11480	SM00388	His Kinase A (phosphoacceptor) domain
SAURJH9_RS11485	SM00448	cheY-homologous receiver domain
SAURJH9_RS11485	SM00862	Transcriptional regulatory protein, C terminal
SAURJH9_RS11495	SM00487	DEAD-like helicases superfamily
SAURJH9_RS11495	SM00490	helicase superfamily c-terminal domain
SAURJH9_RS11530	SM00155	Phospholipase D. Active site motifs.
SAURJH9_RS11535	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
SAURJH9_RS11615	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS11675	SM00226	Low molecular weight phosphatase family
SAURJH9_RS11690	SM00937	SAURJH9_RS11690
SAURJH9_RS11705	SM00357	Cold shock protein domain
SAURJH9_RS11705	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS11705	SM00959	Rho termination factor, N-terminal domain
SAURJH9_RS11780	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
SAURJH9_RS11790	SM01133	SAURJH9_RS11790
SAURJH9_RS11830	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
SAURJH9_RS11855	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS12065	SM00829	Enoylreductase
SAURJH9_RS12070	SM00829	Enoylreductase
SAURJH9_RS12095	SM01133	SAURJH9_RS12095
SAURJH9_RS12115	SM00420	helix_turn_helix, Deoxyribose operon repressor
SAURJH9_RS12115	SM01134	SAURJH9_RS12115
SAURJH9_RS12140	SM00422	helix_turn_helix, mercury resistance
SAURJH9_RS12235	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS12240	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS12250	SM00662	RNA polymerases D
SAURJH9_RS12270	SM00316	Ribosomal protein S1-like RNA-binding domain
SAURJH9_RS12325	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
SAURJH9_RS12330	SM01374	SAURJH9_RS12330
SAURJH9_RS12350	SM00322	K homology RNA-binding domain
SAURJH9_RS12365	SM01382	SAURJH9_RS12365
SAURJH9_RS12365	SM01383	SAURJH9_RS12365
SAURJH9_RS12385	SM01403	SAURJH9_RS12385
SAURJH9_RS12400	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
SAURJH9_RS12400	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
SAURJH9_RS12400	SM00493	SAURJH9_RS12400
SAURJH9_RS12460	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAURJH9_RS12485	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAURJH9_RS12510	SM00852	Probable molybdopterin binding domain
SAURJH9_RS12520	SM00852	Probable molybdopterin binding domain
SAURJH9_RS12530	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS12595	SM00988	UreE urease accessory protein, N-terminal domain
SAURJH9_RS12635	SM00342	helix_turn_helix, arabinose operon control protein
SAURJH9_RS12685	SM00047	Lysozyme subfamily 2
SAURJH9_RS12700	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
SAURJH9_RS12700	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
SAURJH9_RS12715	SM00420	helix_turn_helix, Deoxyribose operon repressor
SAURJH9_RS12870	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS12955	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAURJH9_RS12965	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS12975	SM00448	cheY-homologous receiver domain
SAURJH9_RS12975	SM00862	Transcriptional regulatory protein, C terminal
SAURJH9_RS12980	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
SAURJH9_RS12980	SM00387	Histidine kinase-like ATPases
SAURJH9_RS12980	SM00388	His Kinase A (phosphoacceptor) domain
SAURJH9_RS12985	SM00850	LytTr DNA-binding domain
SAURJH9_RS13020	SM00829	Enoylreductase
SAURJH9_RS13075	SM00342	helix_turn_helix, arabinose operon control protein
SAURJH9_RS13100	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAURJH9_RS13120	SM00422	helix_turn_helix, mercury resistance
SAURJH9_RS13125	SM00421	helix_turn_helix, Lux Regulon
SAURJH9_RS13125	SM00448	cheY-homologous receiver domain
SAURJH9_RS13130	SM00387	Histidine kinase-like ATPases
SAURJH9_RS13235	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS13245	SM00062	Bacterial periplasmic substrate-binding proteins
SAURJH9_RS13245	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
SAURJH9_RS13265	SM00855	Phosphoglycerate mutase family
SAURJH9_RS13320	SM00729	Elongator protein 3, MiaB family, Radical SAM
SAURJH9_RS13320	SM00876	Biotin and Thiamin Synthesis associated domain
SAURJH9_RS13345	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS13350	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS13385	SM00871	Bacterial transcription activator, effector binding domain
SAURJH9_RS13465	SM00116	Domain in cystathionine beta-synthase and other proteins.
SAURJH9_RS13465	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS13505	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS13550	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS13555	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS13590	SM00849	Metallo-beta-lactamase superfamily
SAURJH9_RS13685	SM00487	DEAD-like helicases superfamily
SAURJH9_RS13685	SM00490	helicase superfamily c-terminal domain
SAURJH9_RS13720	SM01208	SAURJH9_RS13720
SAURJH9_RS13770	SM00345	helix_turn_helix gluconate operon transcriptional repressor
SAURJH9_RS13770	SM00895	SAURJH9_RS13770
SAURJH9_RS13775	SM00422	helix_turn_helix, mercury resistance
SAURJH9_RS13780	SM00954	Region found in RelA / SpoT proteins
SAURJH9_RS13810	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS13845	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAURJH9_RS13875	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS13995	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS13995	SM01086	C-terminal, D2-small domain, of ClpB protein
SAURJH9_RS14010	SM00899	SAURJH9_RS14010
SAURJH9_RS14035	SM01266	SAURJH9_RS14035
SAURJH9_RS14245	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
SAURJH9_RS14435	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS14440	SM00387	Histidine kinase-like ATPases
SAURJH9_RS14445	SM00448	cheY-homologous receiver domain
SAURJH9_RS14445	SM00862	Transcriptional regulatory protein, C terminal
SAURJH9_RS14460	SM00098	Alkaline phosphatase homologues
SAURJH9_RS14465	SM00347	helix_turn_helix multiple antibiotic resistance protein
SAURJH9_RS14550	SM00047	Lysozyme subfamily 2
SAURJH9_RS14575	SM00957	SecA DEAD-like domain
SAURJH9_RS14575	SM00958	SecA preprotein cross-linking domain
SAURJH9_RS14605	SM00903	Flavin reductase like domain
SAURJH9_RS14625	SM00903	Flavin reductase like domain
SAURJH9_RS14750	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS14765	SM00867	YceI-like domain 
SAURJH9_RS14775	SM00450	Rhodanese Homology Domain
SAURJH9_RS14830	SM00382	ATPases associated with a variety of cellular activities
SAURJH9_RS14845	SM00357	Cold shock protein domain
SAURJH9_RS14850	SM00530	Helix-turn-helix XRE-family like proteins 
SAURJH9_RS14865	SM00470	ParB-like nuclease domain
SAURJH9_RS14875	SM01228	SAURJH9_RS14875
