AS852_RS00005 SM00382 ATPases associated with a variety of cellular activities AS852_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain AS852_RS00010 SM00480 DNA polymerase III beta subunit AS852_RS00025 SM00387 Histidine kinase-like ATPases AS852_RS00025 SM00433 TopoisomeraseII AS852_RS00030 SM00434 DNA Topoisomerase IV AS852_RS00075 SM00267 diguanylate cyclase AS852_RS00095 SM00788 Adenylosuccinate synthetase AS852_RS00115 SM00448 cheY-homologous receiver domain AS852_RS00115 SM00862 Transcriptional regulatory protein, C terminal AS852_RS00120 SM00091 PAS domain AS852_RS00120 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS852_RS00120 SM00387 Histidine kinase-like ATPases AS852_RS00120 SM00388 His Kinase A (phosphoacceptor) domain AS852_RS00135 SM00849 Metallo-beta-lactamase superfamily AS852_RS00180 SM00857 Resolvase, N terminal domain AS852_RS00265 SM00857 Resolvase, N terminal domain AS852_RS00315 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS852_RS00340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS852_RS00350 SM00450 Rhodanese Homology Domain AS852_RS00350 SM00849 Metallo-beta-lactamase superfamily AS852_RS00355 SM00450 Rhodanese Homology Domain AS852_RS00535 SM00148 Phospholipase C, catalytic domain (part); domain X AS852_RS00545 SM00342 helix_turn_helix, arabinose operon control protein AS852_RS00580 SM00257 Lysin motif AS852_RS00590 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS00650 SM00470 ParB-like nuclease domain AS852_RS00670 SM00822 AS852_RS00670 AS852_RS00715 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS852_RS00730 SM01133 AS852_RS00730 AS852_RS00750 SM00382 ATPases associated with a variety of cellular activities AS852_RS00755 SM00062 Bacterial periplasmic substrate-binding proteins AS852_RS00775 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS00855 SM00984 UDP binding domain AS852_RS00895 SM00382 ATPases associated with a variety of cellular activities AS852_RS00955 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS852_RS01020 SM00487 DEAD-like helicases superfamily AS852_RS01030 SM00382 ATPases associated with a variety of cellular activities AS852_RS01070 SM00382 ATPases associated with a variety of cellular activities AS852_RS01115 SM00342 helix_turn_helix, arabinose operon control protein AS852_RS01115 SM00448 cheY-homologous receiver domain AS852_RS01185 SM00882 Coenzyme A transferase AS852_RS01265 SM00829 Enoylreductase AS852_RS01275 SM00829 Enoylreductase AS852_RS01340 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS852_RS01340 SM00387 Histidine kinase-like ATPases AS852_RS01345 SM00448 cheY-homologous receiver domain AS852_RS01345 SM00850 LytTr DNA-binding domain AS852_RS01365 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS852_RS01365 SM00866 AS852_RS01365 AS852_RS01415 SM00354 helix_turn _helix lactose operon repressor AS852_RS01445 SM00382 ATPases associated with a variety of cellular activities AS852_RS01600 SM00382 ATPases associated with a variety of cellular activities AS852_RS01630 SM01130 AS852_RS01630 AS852_RS01685 SM00506 Appr-1"-p processing enzyme AS852_RS01730 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS01810 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS01820 SM00382 ATPases associated with a variety of cellular activities AS852_RS01875 SM00470 ParB-like nuclease domain AS852_RS01955 SM00855 Phosphoglycerate mutase family AS852_RS02030 SM00116 Domain in cystathionine beta-synthase and other proteins. AS852_RS02030 SM01240 AS852_RS02030 AS852_RS02205 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS852_RS02240 SM00014 Acid phosphatase homologues AS852_RS02265 SM00382 ATPases associated with a variety of cellular activities AS852_RS02265 SM00930 AS852_RS02265 AS852_RS02280 SM00257 Lysin motif AS852_RS02335 SM00642 Alpha-amylase domain AS852_RS02340 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS852_RS02340 SM00866 AS852_RS02340 AS852_RS02360 SM00382 ATPases associated with a variety of cellular activities AS852_RS02370 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS852_RS02370 SM00493 AS852_RS02370 AS852_RS02435 SM00465 GIY-YIG type nucleases (URI domain) AS852_RS02460 SM00493 AS852_RS02460 AS852_RS02465 SM00650 Ribosomal RNA adenine dimethylases AS852_RS02505 SM01400 AS852_RS02505 AS852_RS02525 SM00487 DEAD-like helicases superfamily AS852_RS02525 SM00490 helicase superfamily c-terminal domain AS852_RS02525 SM00982 AS852_RS02525 AS852_RS02525 SM01058 CarD-like/TRCF domain AS852_RS02540 SM00363 S4 RNA-binding domain AS852_RS02550 SM00316 Ribosomal protein S1-like RNA-binding domain AS852_RS02555 SM00977 TilS substrate C-terminal domain AS852_RS02565 SM00382 ATPases associated with a variety of cellular activities AS852_RS02585 SM00905 Dihydroneopterin aldolase AS852_RS02685 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS852_RS02725 SM00382 ATPases associated with a variety of cellular activities AS852_RS02725 SM01086 C-terminal, D2-small domain, of ClpB protein AS852_RS02735 SM00382 ATPases associated with a variety of cellular activities AS852_RS02740 SM00670 Large family of predicted nucleotide-binding domains AS852_RS02760 SM00840 AS852_RS02760 AS852_RS02770 SM00967 RNA 2'-O ribose methyltransferase substrate binding AS852_RS02795 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AS852_RS02795 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AS852_RS02800 SM00649 Ribosomal protein L11/L12 AS852_RS02830 SM00663 RNA polymerase I subunit A N-terminus AS852_RS02850 SM00838 Elongation factor G C-terminus AS852_RS02850 SM00889 Elongation factor G, domain IV AS852_RS02970 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AS852_RS03025 SM00986 Uracil DNA glycosylase superfamily AS852_RS03025 SM00987 UreE urease accessory protein, C-terminal domain AS852_RS03200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS852_RS03210 SM00829 Enoylreductase AS852_RS03225 SM00836 DALR anticodon binding domain AS852_RS03225 SM01016 Arginyl tRNA synthetase N terminal dom AS852_RS03230 SM00478 endonuclease III AS852_RS03345 SM00382 ATPases associated with a variety of cellular activities AS852_RS03350 SM00529 Helix-turn-helix diphteria tox regulatory element AS852_RS03350 SM00899 AS852_RS03350 AS852_RS03365 SM00382 ATPases associated with a variety of cellular activities AS852_RS03395 SM00382 ATPases associated with a variety of cellular activities AS852_RS03415 SM00382 ATPases associated with a variety of cellular activities AS852_RS03435 SM01120 AS852_RS03435 AS852_RS03480 SM00448 cheY-homologous receiver domain AS852_RS03480 SM00862 Transcriptional regulatory protein, C terminal AS852_RS03485 SM00387 Histidine kinase-like ATPases AS852_RS03490 SM00382 ATPases associated with a variety of cellular activities AS852_RS03510 SM00257 Lysin motif AS852_RS03520 SM00342 helix_turn_helix, arabinose operon control protein AS852_RS03615 SM00382 ATPases associated with a variety of cellular activities AS852_RS03620 SM00382 ATPases associated with a variety of cellular activities AS852_RS03625 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS03630 SM00833 Cobalamin synthesis protein cobW C-terminal domain AS852_RS03685 SM00420 helix_turn_helix, Deoxyribose operon repressor AS852_RS03685 SM01134 AS852_RS03685 AS852_RS03710 SM01091 Transporter associated domain AS852_RS03725 SM00387 Histidine kinase-like ATPases AS852_RS03725 SM00388 His Kinase A (phosphoacceptor) domain AS852_RS03730 SM00448 cheY-homologous receiver domain AS852_RS03730 SM00862 Transcriptional regulatory protein, C terminal AS852_RS03785 SM00796 Allophanate hydrolase subunit 1 AS852_RS03790 SM00797 Allophanate hydrolase subunit 2 AS852_RS03805 SM00382 ATPases associated with a variety of cellular activities AS852_RS03810 SM00341 Helicase and RNase D C-terminal AS852_RS03810 SM00487 DEAD-like helicases superfamily AS852_RS03810 SM00490 helicase superfamily c-terminal domain AS852_RS03810 SM00956 AS852_RS03810 AS852_RS03815 SM00382 ATPases associated with a variety of cellular activities AS852_RS03845 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS852_RS03910 SM00382 ATPases associated with a variety of cellular activities AS852_RS03970 SM00267 diguanylate cyclase AS852_RS03990 SM00487 DEAD-like helicases superfamily AS852_RS03990 SM00490 helicase superfamily c-terminal domain AS852_RS04005 SM00957 SecA DEAD-like domain AS852_RS04005 SM00958 SecA preprotein cross-linking domain AS852_RS04015 SM00937 AS852_RS04015 AS852_RS04030 SM00257 Lysin motif AS852_RS04045 SM00487 DEAD-like helicases superfamily AS852_RS04045 SM00490 helicase superfamily c-terminal domain AS852_RS04080 SM00028 Tetratricopeptide repeats AS852_RS04120 SM00919 Malic enzyme, NAD binding domain AS852_RS04120 SM01274 AS852_RS04120 AS852_RS04145 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS852_RS04165 SM01192 AS852_RS04165 AS852_RS04165 SM01193 AS852_RS04165 AS852_RS04185 SM00316 Ribosomal protein S1-like RNA-binding domain AS852_RS04185 SM00357 Cold shock protein domain AS852_RS04185 SM00955 AS852_RS04185 AS852_RS04245 SM00318 Staphylococcal nuclease homologues AS852_RS04250 SM00357 Cold shock protein domain AS852_RS04290 SM00855 Phosphoglycerate mutase family AS852_RS04355 SM00493 AS852_RS04355 AS852_RS04365 SM00382 ATPases associated with a variety of cellular activities AS852_RS04365 SM00930 AS852_RS04365 AS852_RS04395 SM00382 ATPases associated with a variety of cellular activities AS852_RS04455 SM00729 Elongator protein 3, MiaB family, Radical SAM AS852_RS04600 SM01298 AS852_RS04600 AS852_RS04610 SM00316 Ribosomal protein S1-like RNA-binding domain AS852_RS04625 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AS852_RS04725 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS04735 SM00889 Elongation factor G, domain IV AS852_RS04780 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS04835 SM00382 ATPases associated with a variety of cellular activities AS852_RS04835 SM01086 C-terminal, D2-small domain, of ClpB protein AS852_RS04865 SM00825 Beta-ketoacyl synthase AS852_RS04885 SM00382 ATPases associated with a variety of cellular activities AS852_RS04890 SM00382 ATPases associated with a variety of cellular activities AS852_RS04910 SM00382 ATPases associated with a variety of cellular activities AS852_RS04915 SM00382 ATPases associated with a variety of cellular activities AS852_RS04960 SM01118 AS852_RS04960 AS852_RS04970 SM00954 Region found in RelA / SpoT proteins AS852_RS04985 SM00116 Domain in cystathionine beta-synthase and other proteins. AS852_RS04985 SM00924 MgtE intracellular N domain AS852_RS05050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS852_RS05080 SM00914 AS852_RS05080 AS852_RS05120 SM00382 ATPases associated with a variety of cellular activities AS852_RS05145 SM00857 Resolvase, N terminal domain AS852_RS05245 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS05255 SM00047 Lysozyme subfamily 2 AS852_RS05255 SM00644 AS852_RS05255 AS852_RS05315 SM01001 AIR carboxylase AS852_RS05335 SM01211 AS852_RS05335 AS852_RS05360 SM00798 AICARFT/IMPCHase bienzyme AS852_RS05360 SM00851 MGS-like domain AS852_RS05365 SM01209 AS852_RS05365 AS852_RS05365 SM01210 AS852_RS05365 AS852_RS05380 SM00382 ATPases associated with a variety of cellular activities AS852_RS05450 SM00849 Metallo-beta-lactamase superfamily AS852_RS05480 SM00861 Transketolase, pyrimidine binding domain AS852_RS05500 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS05505 SM00382 ATPases associated with a variety of cellular activities AS852_RS05555 SM00838 Elongation factor G C-terminus AS852_RS05580 SM00878 Biotin carboxylase C-terminal domain AS852_RS05660 SM00725 NEAr Transporter domain AS852_RS05665 SM00725 NEAr Transporter domain AS852_RS05670 SM00725 NEAr Transporter domain AS852_RS05705 SM00967 RNA 2'-O ribose methyltransferase substrate binding AS852_RS05715 SM00873 B3/4 domain AS852_RS05715 SM00874 tRNA synthetase B5 domain AS852_RS05715 SM00896 Ferredoxin-fold anticodon binding domain AS852_RS05740 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS852_RS05740 SM00481 DNA polymerase alpha chain like domain AS852_RS05740 SM00483 DNA polymerase X family AS852_RS05745 SM00463 Small MutS-related domain AS852_RS05745 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS852_RS05745 SM00534 ATPase domain of DNA mismatch repair MUTS family AS852_RS05760 SM00465 GIY-YIG type nucleases (URI domain) AS852_RS05960 SM00740 AS852_RS05960 AS852_RS05980 SM00842 Cell division protein FtsA AS852_RS05985 SM00864 Tubulin/FtsZ family, GTPase domain AS852_RS05985 SM00865 Tubulin/FtsZ family, C-terminal domain AS852_RS06010 SM00363 S4 RNA-binding domain AS852_RS06040 SM00363 S4 RNA-binding domain AS852_RS06065 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AS852_RS06070 SM00851 MGS-like domain AS852_RS06070 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AS852_RS06070 SM01209 AS852_RS06070 AS852_RS06075 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AS852_RS06100 SM00072 Guanylate kinase homologues. AS852_RS06105 SM01409 AS852_RS06105 AS852_RS06115 SM00487 DEAD-like helicases superfamily AS852_RS06115 SM00490 helicase superfamily c-terminal domain AS852_RS06150 SM00331 Sigma factor PP2C-like phosphatases AS852_RS06150 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS852_RS06155 SM00220 Serine/Threonine protein kinases, catalytic domain AS852_RS06155 SM00740 AS852_RS06155 AS852_RS06170 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AS852_RS06185 SM01120 AS852_RS06185 AS852_RS06185 SM01121 AS852_RS06185 AS852_RS06190 SM00487 DEAD-like helicases superfamily AS852_RS06190 SM00490 helicase superfamily c-terminal domain AS852_RS06205 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AS852_RS06210 SM00822 AS852_RS06210 AS852_RS06225 SM00358 Double-stranded RNA binding motif AS852_RS06225 SM00535 Ribonuclease III family AS852_RS06230 SM00968 SMC proteins Flexible Hinge Domain AS852_RS06235 SM00382 ATPases associated with a variety of cellular activities AS852_RS06235 SM00962 SRP54-type protein, GTPase domain AS852_RS06235 SM00963 SRP54-type protein, helical bundle domain AS852_RS06245 SM00382 ATPases associated with a variety of cellular activities AS852_RS06245 SM00962 SRP54-type protein, GTPase domain AS852_RS06245 SM00963 SRP54-type protein, helical bundle domain AS852_RS06295 SM00881 CoA binding domain AS852_RS06315 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS852_RS06315 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS852_RS06315 SM00493 AS852_RS06315 AS852_RS06335 SM00382 ATPases associated with a variety of cellular activities AS852_RS06335 SM01086 C-terminal, D2-small domain, of ClpB protein AS852_RS06395 SM00479 AS852_RS06395 AS852_RS06395 SM00481 DNA polymerase alpha chain like domain AS852_RS06410 SM00316 Ribosomal protein S1-like RNA-binding domain AS852_RS06410 SM00322 K homology RNA-binding domain AS852_RS06440 SM00904 Riboflavin kinase AS852_RS06445 SM01387 AS852_RS06445 AS852_RS06450 SM00316 Ribosomal protein S1-like RNA-binding domain AS852_RS06450 SM00322 K homology RNA-binding domain AS852_RS06460 SM00849 Metallo-beta-lactamase superfamily AS852_RS06465 SM00382 ATPases associated with a variety of cellular activities AS852_RS06465 SM00843 AS852_RS06465 AS852_RS06470 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS852_RS06470 SM00866 AS852_RS06470 AS852_RS06495 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS06505 SM00852 Probable molybdopterin binding domain AS852_RS06510 SM00382 ATPases associated with a variety of cellular activities AS852_RS06515 SM00322 K homology RNA-binding domain AS852_RS06515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS852_RS06550 SM00729 Elongator protein 3, MiaB family, Radical SAM AS852_RS06565 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AS852_RS06565 SM00534 ATPase domain of DNA mismatch repair MUTS family AS852_RS06570 SM00853 MutL C terminal dimerisation domain AS852_RS06570 SM01340 AS852_RS06570 AS852_RS06625 SM00422 helix_turn_helix, mercury resistance AS852_RS06630 SM01230 AS852_RS06630 AS852_RS06705 SM00155 Phospholipase D. Active site motifs. AS852_RS06715 SM00318 Staphylococcal nuclease homologues AS852_RS06770 SM01060 AS852_RS06770 AS852_RS06785 SM01240 AS852_RS06785 AS852_RS06815 SM00861 Transketolase, pyrimidine binding domain AS852_RS06890 SM01207 AS852_RS06890 AS852_RS06895 SM00387 Histidine kinase-like ATPases AS852_RS06895 SM00433 TopoisomeraseII AS852_RS06900 SM00434 DNA Topoisomerase IV AS852_RS06915 SM01061 CAT RNA binding domain AS852_RS07020 SM00382 ATPases associated with a variety of cellular activities AS852_RS07025 SM00382 ATPases associated with a variety of cellular activities AS852_RS07065 SM00382 ATPases associated with a variety of cellular activities AS852_RS07095 SM00382 ATPases associated with a variety of cellular activities AS852_RS07105 SM00859 Semialdehyde dehydrogenase, NAD binding domain AS852_RS07110 SM01130 AS852_RS07110 AS852_RS07130 SM01005 Alanine racemase, C-terminal domain AS852_RS07150 SM00357 Cold shock protein domain AS852_RS07185 SM00327 von Willebrand factor (vWF) type A domain AS852_RS07210 SM00861 Transketolase, pyrimidine binding domain AS852_RS07215 SM00387 Histidine kinase-like ATPases AS852_RS07215 SM00388 His Kinase A (phosphoacceptor) domain AS852_RS07220 SM00448 cheY-homologous receiver domain AS852_RS07220 SM00862 Transcriptional regulatory protein, C terminal AS852_RS07235 SM00014 Acid phosphatase homologues AS852_RS07250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS852_RS07250 SM00245 tail specific protease AS852_RS07300 SM00567 E-Z type HEAT repeats AS852_RS07300 SM00932 Scaffold protein Nfu/NifU N terminal AS852_RS07305 SM00932 Scaffold protein Nfu/NifU N terminal AS852_RS07325 SM00844 GA module AS852_RS07345 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS852_RS07345 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS852_RS07350 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AS852_RS07350 SM00475 5'-3' exonuclease AS852_RS07370 SM00981 AS852_RS07370 AS852_RS07420 SM00478 endonuclease III AS852_RS07420 SM00525 AS852_RS07420 AS852_RS07435 SM00479 AS852_RS07435 AS852_RS07435 SM00491 AS852_RS07435 AS852_RS07470 SM00914 AS852_RS07470 AS852_RS07500 SM00562 AS852_RS07500 AS852_RS07525 SM00411 bacterial (prokaryotic) histone like domain AS852_RS07540 SM00316 Ribosomal protein S1-like RNA-binding domain AS852_RS07565 SM00870 AS852_RS07565 AS852_RS07580 SM00257 Lysin motif AS852_RS07585 SM00487 DEAD-like helicases superfamily AS852_RS07585 SM00490 helicase superfamily c-terminal domain AS852_RS07635 SM00287 Bacterial SH3 domain homologues AS852_RS07635 SM00646 AS852_RS07635 AS852_RS07700 SM00635 Bacterial Ig-like domain 2 AS852_RS07755 SM00507 HNH nucleases AS852_RS07765 SM00487 DEAD-like helicases superfamily AS852_RS07770 SM00990 AS852_RS07770 AS852_RS07865 SM00482 DNA polymerase A domain AS852_RS07940 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS07945 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS07990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS852_RS07990 SM00387 Histidine kinase-like ATPases AS852_RS07990 SM00388 His Kinase A (phosphoacceptor) domain AS852_RS07995 SM00448 cheY-homologous receiver domain AS852_RS07995 SM00862 Transcriptional regulatory protein, C terminal AS852_RS08000 SM00363 S4 RNA-binding domain AS852_RS08065 SM00342 helix_turn_helix, arabinose operon control protein AS852_RS08065 SM00871 Bacterial transcription activator, effector binding domain AS852_RS08070 SM00642 Alpha-amylase domain AS852_RS08075 SM00354 helix_turn _helix lactose operon repressor AS852_RS08090 SM01350 AS852_RS08090 AS852_RS08120 SM00861 Transketolase, pyrimidine binding domain AS852_RS08170 SM00878 Biotin carboxylase C-terminal domain AS852_RS08180 SM00841 Elongation factor P, C-terminal AS852_RS08180 SM01185 AS852_RS08180 AS852_RS08205 SM00450 Rhodanese Homology Domain AS852_RS08265 SM00849 Metallo-beta-lactamase superfamily AS852_RS08320 SM00382 ATPases associated with a variety of cellular activities AS852_RS08325 SM00518 AP endonuclease family 2 AS852_RS08330 SM00487 DEAD-like helicases superfamily AS852_RS08330 SM00490 helicase superfamily c-terminal domain AS852_RS08350 SM00400 zinc finger AS852_RS08350 SM00493 AS852_RS08350 AS852_RS08360 SM00116 Domain in cystathionine beta-synthase and other proteins. AS852_RS08420 SM00729 Elongator protein 3, MiaB family, Radical SAM AS852_RS08435 SM00271 DnaJ molecular chaperone homology domain AS852_RS08455 SM00729 Elongator protein 3, MiaB family, Radical SAM AS852_RS08465 SM00838 Elongation factor G C-terminus AS852_RS08480 SM00849 Metallo-beta-lactamase superfamily AS852_RS08490 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS852_RS08505 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS852_RS08515 SM01103 AS852_RS08515 AS852_RS08565 SM00878 Biotin carboxylase C-terminal domain AS852_RS08575 SM00797 Allophanate hydrolase subunit 2 AS852_RS08580 SM00796 Allophanate hydrolase subunit 1 AS852_RS08615 SM00732 Likely ribonuclease with RNase H fold. AS852_RS08625 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS852_RS08630 SM00382 ATPases associated with a variety of cellular activities AS852_RS08635 SM00028 Tetratricopeptide repeats AS852_RS08685 SM00382 ATPases associated with a variety of cellular activities AS852_RS08715 SM00287 Bacterial SH3 domain homologues AS852_RS08715 SM00646 AS852_RS08715 AS852_RS08725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS852_RS08725 SM00954 Region found in RelA / SpoT proteins AS852_RS08745 SM01323 AS852_RS08745 AS852_RS08760 SM00382 ATPases associated with a variety of cellular activities AS852_RS08765 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS852_RS08835 SM00650 Ribosomal RNA adenine dimethylases AS852_RS08905 SM01004 Delta-aminolevulinic acid dehydratase AS852_RS08935 SM00382 ATPases associated with a variety of cellular activities AS852_RS08935 SM00994 ClpX C4-type zinc finger AS852_RS08935 SM01086 C-terminal, D2-small domain, of ClpB protein AS852_RS08985 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AS852_RS09010 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AS852_RS09020 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AS852_RS09020 SM01232 AS852_RS09020 AS852_RS09025 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AS852_RS09025 SM00474 3'-5' exonuclease AS852_RS09025 SM00475 5'-3' exonuclease AS852_RS09025 SM00482 DNA polymerase A domain AS852_RS09035 SM00387 Histidine kinase-like ATPases AS852_RS09035 SM00388 His Kinase A (phosphoacceptor) domain AS852_RS09040 SM00448 cheY-homologous receiver domain AS852_RS09040 SM00862 Transcriptional regulatory protein, C terminal AS852_RS09050 SM01329 AS852_RS09050 AS852_RS09085 SM00919 Malic enzyme, NAD binding domain AS852_RS09085 SM01274 AS852_RS09085 AS852_RS09090 SM00481 DNA polymerase alpha chain like domain AS852_RS09105 SM00116 Domain in cystathionine beta-synthase and other proteins. AS852_RS09120 SM00849 Metallo-beta-lactamase superfamily AS852_RS09135 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AS852_RS09135 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AS852_RS09165 SM00981 AS852_RS09165 AS852_RS09180 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AS852_RS09185 SM00363 S4 RNA-binding domain AS852_RS09185 SM01390 AS852_RS09185 AS852_RS09230 SM00563 Phosphate acyltransferases AS852_RS09235 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AS852_RS09240 SM00363 S4 RNA-binding domain AS852_RS09255 SM00725 NEAr Transporter domain AS852_RS09285 SM00354 helix_turn _helix lactose operon repressor AS852_RS09295 SM00830 Chorismate mutase type II AS852_RS09320 SM00843 AS852_RS09320 AS852_RS09350 SM00849 Metallo-beta-lactamase superfamily AS852_RS09380 SM00363 S4 RNA-binding domain AS852_RS09400 SM00450 Rhodanese Homology Domain AS852_RS09415 SM00729 Elongator protein 3, MiaB family, Radical SAM AS852_RS09425 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS09475 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS852_RS09485 SM00047 Lysozyme subfamily 2 AS852_RS09575 SM01234 AS852_RS09575 AS852_RS09600 SM00894 Excalibur calcium-binding domain AS852_RS09725 SM00287 Bacterial SH3 domain homologues AS852_RS09725 SM00644 AS852_RS09725 AS852_RS09740 SM00047 Lysozyme subfamily 2 AS852_RS09985 SM00382 ATPases associated with a variety of cellular activities AS852_RS10020 SM01040 BRO family, N-terminal domain AS852_RS10025 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS10030 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS10135 SM00382 ATPases associated with a variety of cellular activities AS852_RS10160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS852_RS10195 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS10200 SM00421 helix_turn_helix, Lux Regulon AS852_RS10200 SM00448 cheY-homologous receiver domain AS852_RS10250 SM00382 ATPases associated with a variety of cellular activities AS852_RS10255 SM00062 Bacterial periplasmic substrate-binding proteins AS852_RS10445 SM00382 ATPases associated with a variety of cellular activities AS852_RS10455 SM00478 endonuclease III AS852_RS10525 SM00226 Low molecular weight phosphatase family AS852_RS10540 SM00421 helix_turn_helix, Lux Regulon AS852_RS10540 SM00448 cheY-homologous receiver domain AS852_RS10545 SM00387 Histidine kinase-like ATPases AS852_RS10610 SM00479 AS852_RS10610 AS852_RS10630 SM00046 Diacylglycerol kinase catalytic domain (presumed) AS852_RS10640 SM00845 GatB domain AS852_RS10665 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AS852_RS10665 SM00292 breast cancer carboxy-terminal domain AS852_RS10665 SM00532 Ligase N family AS852_RS10685 SM00998 Adenylosuccinate lyase C-terminus AS852_RS10745 SM01131 AS852_RS10745 AS852_RS10805 SM00382 ATPases associated with a variety of cellular activities AS852_RS10815 SM00382 ATPases associated with a variety of cellular activities AS852_RS10820 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS852_RS10895 SM00883 Chaperonin 10 Kd subunit AS852_RS10925 SM00793 Accessory gene regulator B AS852_RS10930 SM00794 Staphylococcal AgrD protein AS852_RS10940 SM00448 cheY-homologous receiver domain AS852_RS10940 SM00850 LytTr DNA-binding domain AS852_RS10950 SM00640 Glycosyl hydrolases family 32 AS852_RS10955 SM00354 helix_turn _helix lactose operon repressor AS852_RS10975 SM00881 CoA binding domain AS852_RS10980 SM00382 ATPases associated with a variety of cellular activities AS852_RS10990 SM00534 ATPase domain of DNA mismatch repair MUTS family AS852_RS11045 SM00917 LeuA allosteric (dimerisation) domain AS852_RS11050 SM01329 AS852_RS11050 AS852_RS11100 SM00731 SprT homologues. AS852_RS11105 SM00316 Ribosomal protein S1-like RNA-binding domain AS852_RS11105 SM00732 Likely ribonuclease with RNase H fold. AS852_RS11125 SM00331 Sigma factor PP2C-like phosphatases AS852_RS11125 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AS852_RS11145 SM01005 Alanine racemase, C-terminal domain AS852_RS11190 SM00387 Histidine kinase-like ATPases AS852_RS11190 SM00388 His Kinase A (phosphoacceptor) domain AS852_RS11195 SM00448 cheY-homologous receiver domain AS852_RS11195 SM00862 Transcriptional regulatory protein, C terminal AS852_RS11200 SM00487 DEAD-like helicases superfamily AS852_RS11200 SM00490 helicase superfamily c-terminal domain AS852_RS11235 SM00155 Phospholipase D. Active site motifs. AS852_RS11240 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AS852_RS11335 SM00382 ATPases associated with a variety of cellular activities AS852_RS11395 SM00226 Low molecular weight phosphatase family AS852_RS11410 SM00937 AS852_RS11410 AS852_RS11430 SM00357 Cold shock protein domain AS852_RS11430 SM00382 ATPases associated with a variety of cellular activities AS852_RS11430 SM00959 Rho termination factor, N-terminal domain AS852_RS11510 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AS852_RS11520 SM01133 AS852_RS11520 AS852_RS11560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AS852_RS11605 SM00382 ATPases associated with a variety of cellular activities AS852_RS11890 SM00829 Enoylreductase AS852_RS11895 SM00829 Enoylreductase AS852_RS11920 SM01133 AS852_RS11920 AS852_RS11935 SM00420 helix_turn_helix, Deoxyribose operon repressor AS852_RS11935 SM01134 AS852_RS11935 AS852_RS11965 SM00422 helix_turn_helix, mercury resistance AS852_RS12045 SM00382 ATPases associated with a variety of cellular activities AS852_RS12050 SM00382 ATPases associated with a variety of cellular activities AS852_RS12060 SM00662 RNA polymerases D AS852_RS12080 SM00316 Ribosomal protein S1-like RNA-binding domain AS852_RS12135 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AS852_RS12140 SM01374 AS852_RS12140 AS852_RS12160 SM00322 K homology RNA-binding domain AS852_RS12175 SM01382 AS852_RS12175 AS852_RS12175 SM01383 AS852_RS12175 AS852_RS12195 SM01403 AS852_RS12195 AS852_RS12210 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AS852_RS12210 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AS852_RS12210 SM00493 AS852_RS12210 AS852_RS12270 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS12305 SM00729 Elongator protein 3, MiaB family, Radical SAM AS852_RS12330 SM00852 Probable molybdopterin binding domain AS852_RS12340 SM00852 Probable molybdopterin binding domain AS852_RS12350 SM00382 ATPases associated with a variety of cellular activities AS852_RS12415 SM00988 UreE urease accessory protein, N-terminal domain AS852_RS12455 SM00342 helix_turn_helix, arabinose operon control protein AS852_RS12515 SM00047 Lysozyme subfamily 2 AS852_RS12530 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS852_RS12530 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AS852_RS12545 SM00420 helix_turn_helix, Deoxyribose operon repressor AS852_RS12685 SM00382 ATPases associated with a variety of cellular activities AS852_RS12775 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS12785 SM00382 ATPases associated with a variety of cellular activities AS852_RS12795 SM00448 cheY-homologous receiver domain AS852_RS12795 SM00862 Transcriptional regulatory protein, C terminal AS852_RS12800 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AS852_RS12800 SM00387 Histidine kinase-like ATPases AS852_RS12800 SM00388 His Kinase A (phosphoacceptor) domain AS852_RS12805 SM00850 LytTr DNA-binding domain AS852_RS12845 SM00829 Enoylreductase AS852_RS12900 SM00342 helix_turn_helix, arabinose operon control protein AS852_RS12925 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS12950 SM00422 helix_turn_helix, mercury resistance AS852_RS12955 SM00421 helix_turn_helix, Lux Regulon AS852_RS12955 SM00448 cheY-homologous receiver domain AS852_RS12960 SM00387 Histidine kinase-like ATPases AS852_RS12985 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AS852_RS13060 SM00382 ATPases associated with a variety of cellular activities AS852_RS13070 SM00062 Bacterial periplasmic substrate-binding proteins AS852_RS13070 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AS852_RS13085 SM00855 Phosphoglycerate mutase family AS852_RS13145 SM00729 Elongator protein 3, MiaB family, Radical SAM AS852_RS13145 SM00876 Biotin and Thiamin Synthesis associated domain AS852_RS13170 SM00382 ATPases associated with a variety of cellular activities AS852_RS13175 SM00382 ATPases associated with a variety of cellular activities AS852_RS13210 SM00871 Bacterial transcription activator, effector binding domain AS852_RS13285 SM00116 Domain in cystathionine beta-synthase and other proteins. AS852_RS13285 SM00382 ATPases associated with a variety of cellular activities AS852_RS13320 SM00382 ATPases associated with a variety of cellular activities AS852_RS13350 SM00382 ATPases associated with a variety of cellular activities AS852_RS13355 SM00382 ATPases associated with a variety of cellular activities AS852_RS13515 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS13570 SM00345 helix_turn_helix gluconate operon transcriptional repressor AS852_RS13570 SM00895 AS852_RS13570 AS852_RS13575 SM00422 helix_turn_helix, mercury resistance AS852_RS13580 SM00954 Region found in RelA / SpoT proteins AS852_RS13620 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS13630 SM00382 ATPases associated with a variety of cellular activities AS852_RS13665 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS13805 SM00382 ATPases associated with a variety of cellular activities AS852_RS13805 SM01086 C-terminal, D2-small domain, of ClpB protein AS852_RS13820 SM00899 AS852_RS13820 AS852_RS13845 SM01266 AS852_RS13845 AS852_RS14050 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AS852_RS14230 SM00382 ATPases associated with a variety of cellular activities AS852_RS14235 SM00387 Histidine kinase-like ATPases AS852_RS14240 SM00448 cheY-homologous receiver domain AS852_RS14240 SM00862 Transcriptional regulatory protein, C terminal AS852_RS14255 SM00098 Alkaline phosphatase homologues AS852_RS14265 SM00347 helix_turn_helix multiple antibiotic resistance protein AS852_RS14350 SM00047 Lysozyme subfamily 2 AS852_RS14375 SM00957 SecA DEAD-like domain AS852_RS14375 SM00958 SecA preprotein cross-linking domain AS852_RS14405 SM00903 Flavin reductase like domain AS852_RS14435 SM00903 Flavin reductase like domain AS852_RS14565 SM00867 YceI-like domain AS852_RS14575 SM00450 Rhodanese Homology Domain AS852_RS14640 SM00382 ATPases associated with a variety of cellular activities AS852_RS14655 SM00357 Cold shock protein domain AS852_RS14660 SM00530 Helix-turn-helix XRE-family like proteins AS852_RS14675 SM00470 ParB-like nuclease domain AS852_RS14685 SM01228 AS852_RS14685