SAR_RS00005 SM00382 ATPases associated with a variety of cellular activities SAR_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain SAR_RS00010 SM00480 DNA polymerase III beta subunit SAR_RS00025 SM00387 Histidine kinase-like ATPases SAR_RS00025 SM00433 TopoisomeraseII SAR_RS00030 SM00434 DNA Topoisomerase IV SAR_RS00070 SM00267 diguanylate cyclase SAR_RS00085 SM00788 Adenylosuccinate synthetase SAR_RS00100 SM00448 cheY-homologous receiver domain SAR_RS00100 SM00862 Transcriptional regulatory protein, C terminal SAR_RS00105 SM00091 PAS domain SAR_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SAR_RS00105 SM00387 Histidine kinase-like ATPases SAR_RS00105 SM00388 His Kinase A (phosphoacceptor) domain SAR_RS00120 SM00849 Metallo-beta-lactamase superfamily SAR_RS00215 SM00450 Rhodanese Homology Domain SAR_RS00220 SM00849 Metallo-beta-lactamase superfamily SAR_RS00225 SM00450 Rhodanese Homology Domain SAR_RS00245 SM00650 Ribosomal RNA adenine dimethylases SAR_RS00290 SM00857 Resolvase, N terminal domain SAR_RS00295 SM00857 Resolvase, N terminal domain SAR_RS00330 SM00448 cheY-homologous receiver domain SAR_RS00330 SM00862 Transcriptional regulatory protein, C terminal SAR_RS00335 SM00387 Histidine kinase-like ATPases SAR_RS00335 SM00388 His Kinase A (phosphoacceptor) domain SAR_RS00415 SM00382 ATPases associated with a variety of cellular activities SAR_RS00495 SM00148 Phospholipase C, catalytic domain (part); domain X SAR_RS00505 SM00342 helix_turn_helix, arabinose operon control protein SAR_RS00540 SM00257 Lysin motif SAR_RS00545 SM00347 helix_turn_helix multiple antibiotic resistance protein SAR_RS00605 SM00470 ParB-like nuclease domain SAR_RS00620 SM00822 SAR_RS00620 SAR_RS00665 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAR_RS00685 SM01133 SAR_RS00685 SAR_RS00705 SM00382 ATPases associated with a variety of cellular activities SAR_RS00710 SM00062 Bacterial periplasmic substrate-binding proteins SAR_RS00730 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS00810 SM00984 UDP binding domain SAR_RS00850 SM00382 ATPases associated with a variety of cellular activities SAR_RS00910 SM00859 Semialdehyde dehydrogenase, NAD binding domain SAR_RS00965 SM00487 DEAD-like helicases superfamily SAR_RS00975 SM00382 ATPases associated with a variety of cellular activities SAR_RS01010 SM00382 ATPases associated with a variety of cellular activities SAR_RS01055 SM00342 helix_turn_helix, arabinose operon control protein SAR_RS01055 SM00448 cheY-homologous receiver domain SAR_RS01130 SM00882 Coenzyme A transferase SAR_RS01215 SM00829 Enoylreductase SAR_RS01225 SM00829 Enoylreductase SAR_RS01280 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SAR_RS01280 SM00387 Histidine kinase-like ATPases SAR_RS01285 SM00448 cheY-homologous receiver domain SAR_RS01285 SM00850 LytTr DNA-binding domain SAR_RS01305 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAR_RS01305 SM00866 SAR_RS01305 SAR_RS01350 SM00354 helix_turn _helix lactose operon repressor SAR_RS01380 SM00382 ATPases associated with a variety of cellular activities SAR_RS01530 SM00382 ATPases associated with a variety of cellular activities SAR_RS01560 SM01130 SAR_RS01560 SAR_RS01615 SM00506 Appr-1"-p processing enzyme SAR_RS01655 SM00347 helix_turn_helix multiple antibiotic resistance protein SAR_RS01735 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS01745 SM00382 ATPases associated with a variety of cellular activities SAR_RS01795 SM00470 ParB-like nuclease domain SAR_RS01845 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS01880 SM00942 Primase C terminal 1 (PriCT-1) SAR_RS01985 SM00855 Phosphoglycerate mutase family SAR_RS02055 SM00116 Domain in cystathionine beta-synthase and other proteins. SAR_RS02055 SM01240 SAR_RS02055 SAR_RS02230 SM00833 Cobalamin synthesis protein cobW C-terminal domain SAR_RS02260 SM00014 Acid phosphatase homologues SAR_RS02290 SM00382 ATPases associated with a variety of cellular activities SAR_RS02290 SM00930 SAR_RS02290 SAR_RS02305 SM00257 Lysin motif SAR_RS02360 SM00642 Alpha-amylase domain SAR_RS02365 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAR_RS02365 SM00866 SAR_RS02365 SAR_RS02380 SM00382 ATPases associated with a variety of cellular activities SAR_RS02390 SM00493 SAR_RS02390 SAR_RS02460 SM00465 GIY-YIG type nucleases (URI domain) SAR_RS02485 SM00493 SAR_RS02485 SAR_RS02490 SM00650 Ribosomal RNA adenine dimethylases SAR_RS02530 SM01400 SAR_RS02530 SAR_RS02550 SM00487 DEAD-like helicases superfamily SAR_RS02550 SM00490 helicase superfamily c-terminal domain SAR_RS02550 SM00982 SAR_RS02550 SAR_RS02550 SM01058 CarD-like/TRCF domain SAR_RS02565 SM00363 S4 RNA-binding domain SAR_RS02575 SM00316 Ribosomal protein S1-like RNA-binding domain SAR_RS02580 SM00977 TilS substrate C-terminal domain SAR_RS02590 SM00382 ATPases associated with a variety of cellular activities SAR_RS02610 SM00905 Dihydroneopterin aldolase SAR_RS02705 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAR_RS02745 SM00382 ATPases associated with a variety of cellular activities SAR_RS02745 SM01086 C-terminal, D2-small domain, of ClpB protein SAR_RS02755 SM00382 ATPases associated with a variety of cellular activities SAR_RS02760 SM00670 Large family of predicted nucleotide-binding domains SAR_RS02775 SM00840 SAR_RS02775 SAR_RS02785 SM00967 RNA 2'-O ribose methyltransferase substrate binding SAR_RS02805 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SAR_RS02805 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SAR_RS02810 SM00649 Ribosomal protein L11/L12 SAR_RS02840 SM00663 RNA polymerase I subunit A N-terminus SAR_RS02860 SM00838 Elongation factor G C-terminus SAR_RS02860 SM00889 Elongation factor G, domain IV SAR_RS02970 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SAR_RS03020 SM00986 Uracil DNA glycosylase superfamily SAR_RS03020 SM00987 UreE urease accessory protein, C-terminal domain SAR_RS03140 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAR_RS03150 SM00829 Enoylreductase SAR_RS03165 SM00836 DALR anticodon binding domain SAR_RS03165 SM01016 Arginyl tRNA synthetase N terminal dom SAR_RS03170 SM00478 endonuclease III SAR_RS03300 SM00382 ATPases associated with a variety of cellular activities SAR_RS03305 SM00529 Helix-turn-helix diphteria tox regulatory element SAR_RS03305 SM00899 SAR_RS03305 SAR_RS03320 SM00382 ATPases associated with a variety of cellular activities SAR_RS03350 SM00382 ATPases associated with a variety of cellular activities SAR_RS03370 SM00382 ATPases associated with a variety of cellular activities SAR_RS03390 SM01120 SAR_RS03390 SAR_RS03435 SM00448 cheY-homologous receiver domain SAR_RS03435 SM00862 Transcriptional regulatory protein, C terminal SAR_RS03440 SM00387 Histidine kinase-like ATPases SAR_RS03445 SM00382 ATPases associated with a variety of cellular activities SAR_RS03465 SM00257 Lysin motif SAR_RS03480 SM00342 helix_turn_helix, arabinose operon control protein SAR_RS03545 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SAR_RS03555 SM00226 Low molecular weight phosphatase family SAR_RS03575 SM00382 ATPases associated with a variety of cellular activities SAR_RS03605 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS03645 SM00857 Resolvase, N terminal domain SAR_RS03675 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SAR_RS03740 SM00382 ATPases associated with a variety of cellular activities SAR_RS03745 SM00382 ATPases associated with a variety of cellular activities SAR_RS03750 SM00347 helix_turn_helix multiple antibiotic resistance protein SAR_RS03755 SM00833 Cobalamin synthesis protein cobW C-terminal domain SAR_RS03810 SM00420 helix_turn_helix, Deoxyribose operon repressor SAR_RS03810 SM01134 SAR_RS03810 SAR_RS03835 SM01091 Transporter associated domain SAR_RS03850 SM00387 Histidine kinase-like ATPases SAR_RS03850 SM00388 His Kinase A (phosphoacceptor) domain SAR_RS03855 SM00448 cheY-homologous receiver domain SAR_RS03855 SM00862 Transcriptional regulatory protein, C terminal SAR_RS03910 SM00796 Allophanate hydrolase subunit 1 SAR_RS03915 SM00797 Allophanate hydrolase subunit 2 SAR_RS03930 SM00382 ATPases associated with a variety of cellular activities SAR_RS03935 SM00341 Helicase and RNase D C-terminal SAR_RS03935 SM00487 DEAD-like helicases superfamily SAR_RS03935 SM00490 helicase superfamily c-terminal domain SAR_RS03935 SM00956 SAR_RS03935 SAR_RS03940 SM00382 ATPases associated with a variety of cellular activities SAR_RS03960 SM00046 Diacylglycerol kinase catalytic domain (presumed) SAR_RS04015 SM00382 ATPases associated with a variety of cellular activities SAR_RS04070 SM00267 diguanylate cyclase SAR_RS04090 SM00487 DEAD-like helicases superfamily SAR_RS04090 SM00490 helicase superfamily c-terminal domain SAR_RS04105 SM00957 SecA DEAD-like domain SAR_RS04105 SM00958 SecA preprotein cross-linking domain SAR_RS04115 SM00937 SAR_RS04115 SAR_RS04125 SM00257 Lysin motif SAR_RS04140 SM00487 DEAD-like helicases superfamily SAR_RS04140 SM00490 helicase superfamily c-terminal domain SAR_RS04170 SM00028 Tetratricopeptide repeats SAR_RS04205 SM00919 Malic enzyme, NAD binding domain SAR_RS04205 SM01274 SAR_RS04205 SAR_RS04225 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAR_RS04245 SM01192 SAR_RS04245 SAR_RS04245 SM01193 SAR_RS04245 SAR_RS04265 SM00316 Ribosomal protein S1-like RNA-binding domain SAR_RS04265 SM00357 Cold shock protein domain SAR_RS04265 SM00955 SAR_RS04265 SAR_RS04320 SM00318 Staphylococcal nuclease homologues SAR_RS04325 SM00357 Cold shock protein domain SAR_RS04365 SM00855 Phosphoglycerate mutase family SAR_RS04420 SM00493 SAR_RS04420 SAR_RS04430 SM00382 ATPases associated with a variety of cellular activities SAR_RS04430 SM00930 SAR_RS04430 SAR_RS04455 SM00382 ATPases associated with a variety of cellular activities SAR_RS04515 SM00729 Elongator protein 3, MiaB family, Radical SAM SAR_RS04660 SM01298 SAR_RS04660 SAR_RS04670 SM00316 Ribosomal protein S1-like RNA-binding domain SAR_RS04685 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SAR_RS04770 SM00382 ATPases associated with a variety of cellular activities SAR_RS04770 SM01086 C-terminal, D2-small domain, of ClpB protein SAR_RS04815 SM00825 Beta-ketoacyl synthase SAR_RS04835 SM00382 ATPases associated with a variety of cellular activities SAR_RS04840 SM00382 ATPases associated with a variety of cellular activities SAR_RS04865 SM00382 ATPases associated with a variety of cellular activities SAR_RS04870 SM00382 ATPases associated with a variety of cellular activities SAR_RS04935 SM01118 SAR_RS04935 SAR_RS04945 SM00954 Region found in RelA / SpoT proteins SAR_RS04960 SM00116 Domain in cystathionine beta-synthase and other proteins. SAR_RS04960 SM00924 MgtE intracellular N domain SAR_RS05035 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SAR_RS05065 SM00914 SAR_RS05065 SAR_RS05105 SM00382 ATPases associated with a variety of cellular activities SAR_RS05210 SM00347 helix_turn_helix multiple antibiotic resistance protein SAR_RS05220 SM00047 Lysozyme subfamily 2 SAR_RS05220 SM00644 SAR_RS05220 SAR_RS05285 SM01001 AIR carboxylase SAR_RS05305 SM01211 SAR_RS05305 SAR_RS05330 SM00798 AICARFT/IMPCHase bienzyme SAR_RS05330 SM00851 MGS-like domain SAR_RS05335 SM01209 SAR_RS05335 SAR_RS05335 SM01210 SAR_RS05335 SAR_RS05345 SM00382 ATPases associated with a variety of cellular activities SAR_RS05415 SM00849 Metallo-beta-lactamase superfamily SAR_RS05445 SM00861 Transketolase, pyrimidine binding domain SAR_RS05465 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS05470 SM00382 ATPases associated with a variety of cellular activities SAR_RS05520 SM00838 Elongation factor G C-terminus SAR_RS05545 SM00878 Biotin carboxylase C-terminal domain SAR_RS05625 SM00725 NEAr Transporter domain SAR_RS05630 SM00725 NEAr Transporter domain SAR_RS05635 SM00725 NEAr Transporter domain SAR_RS05670 SM00967 RNA 2'-O ribose methyltransferase substrate binding SAR_RS05680 SM00873 B3/4 domain SAR_RS05680 SM00874 tRNA synthetase B5 domain SAR_RS05680 SM00896 Ferredoxin-fold anticodon binding domain SAR_RS05700 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAR_RS05700 SM00481 DNA polymerase alpha chain like domain SAR_RS05700 SM00483 DNA polymerase X family SAR_RS05705 SM00463 Small MutS-related domain SAR_RS05705 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SAR_RS05705 SM00534 ATPase domain of DNA mismatch repair MUTS family SAR_RS05720 SM00465 GIY-YIG type nucleases (URI domain) SAR_RS05910 SM00740 SAR_RS05910 SAR_RS05930 SM00842 Cell division protein FtsA SAR_RS05935 SM00864 Tubulin/FtsZ family, GTPase domain SAR_RS05935 SM00865 Tubulin/FtsZ family, C-terminal domain SAR_RS05960 SM00363 S4 RNA-binding domain SAR_RS05990 SM00363 S4 RNA-binding domain SAR_RS06015 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SAR_RS06020 SM00851 MGS-like domain SAR_RS06020 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SAR_RS06020 SM01209 SAR_RS06020 SAR_RS06025 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SAR_RS06050 SM00072 Guanylate kinase homologues. SAR_RS06055 SM01409 SAR_RS06055 SAR_RS06065 SM00487 DEAD-like helicases superfamily SAR_RS06065 SM00490 helicase superfamily c-terminal domain SAR_RS06100 SM00331 Sigma factor PP2C-like phosphatases SAR_RS06100 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SAR_RS06105 SM00220 Serine/Threonine protein kinases, catalytic domain SAR_RS06105 SM00740 SAR_RS06105 SAR_RS06120 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SAR_RS06135 SM01120 SAR_RS06135 SAR_RS06135 SM01121 SAR_RS06135 SAR_RS06140 SM00487 DEAD-like helicases superfamily SAR_RS06140 SM00490 helicase superfamily c-terminal domain SAR_RS06155 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SAR_RS06160 SM00822 SAR_RS06160 SAR_RS06175 SM00358 Double-stranded RNA binding motif SAR_RS06175 SM00535 Ribonuclease III family SAR_RS06180 SM00968 SMC proteins Flexible Hinge Domain SAR_RS06185 SM00382 ATPases associated with a variety of cellular activities SAR_RS06185 SM00962 SRP54-type protein, GTPase domain SAR_RS06185 SM00963 SRP54-type protein, helical bundle domain SAR_RS06195 SM00382 ATPases associated with a variety of cellular activities SAR_RS06195 SM00962 SRP54-type protein, GTPase domain SAR_RS06195 SM00963 SRP54-type protein, helical bundle domain SAR_RS06245 SM00881 CoA binding domain SAR_RS06250 SM00257 Lysin motif SAR_RS06265 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SAR_RS06265 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SAR_RS06265 SM00493 SAR_RS06265 SAR_RS06285 SM00382 ATPases associated with a variety of cellular activities SAR_RS06285 SM01086 C-terminal, D2-small domain, of ClpB protein SAR_RS06345 SM00479 SAR_RS06345 SAR_RS06345 SM00481 DNA polymerase alpha chain like domain SAR_RS06355 SM00316 Ribosomal protein S1-like RNA-binding domain SAR_RS06355 SM00322 K homology RNA-binding domain SAR_RS06385 SM00904 Riboflavin kinase SAR_RS06390 SM01387 SAR_RS06390 SAR_RS06395 SM00316 Ribosomal protein S1-like RNA-binding domain SAR_RS06395 SM00322 K homology RNA-binding domain SAR_RS06400 SM00849 Metallo-beta-lactamase superfamily SAR_RS06405 SM00382 ATPases associated with a variety of cellular activities SAR_RS06405 SM00843 SAR_RS06405 SAR_RS06410 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAR_RS06410 SM00866 SAR_RS06410 SAR_RS06435 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS06445 SM00852 Probable molybdopterin binding domain SAR_RS06450 SM00382 ATPases associated with a variety of cellular activities SAR_RS06455 SM00322 K homology RNA-binding domain SAR_RS06455 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAR_RS06485 SM00729 Elongator protein 3, MiaB family, Radical SAM SAR_RS06500 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SAR_RS06500 SM00534 ATPase domain of DNA mismatch repair MUTS family SAR_RS06505 SM00853 MutL C terminal dimerisation domain SAR_RS06505 SM01340 SAR_RS06505 SAR_RS06560 SM00422 helix_turn_helix, mercury resistance SAR_RS06565 SM01230 SAR_RS06565 SAR_RS06770 SM00155 Phospholipase D. Active site motifs. SAR_RS06775 SM00382 ATPases associated with a variety of cellular activities SAR_RS06790 SM00448 cheY-homologous receiver domain SAR_RS06800 SM00318 Staphylococcal nuclease homologues SAR_RS06855 SM01060 SAR_RS06855 SAR_RS06870 SM01240 SAR_RS06870 SAR_RS06900 SM00861 Transketolase, pyrimidine binding domain SAR_RS06965 SM01207 SAR_RS06965 SAR_RS06970 SM00387 Histidine kinase-like ATPases SAR_RS06970 SM00433 TopoisomeraseII SAR_RS06975 SM00434 DNA Topoisomerase IV SAR_RS06990 SM01061 CAT RNA binding domain SAR_RS07100 SM00382 ATPases associated with a variety of cellular activities SAR_RS07105 SM00382 ATPases associated with a variety of cellular activities SAR_RS07140 SM00382 ATPases associated with a variety of cellular activities SAR_RS07165 SM00382 ATPases associated with a variety of cellular activities SAR_RS07175 SM00859 Semialdehyde dehydrogenase, NAD binding domain SAR_RS07180 SM01130 SAR_RS07180 SAR_RS07200 SM01005 Alanine racemase, C-terminal domain SAR_RS07215 SM00357 Cold shock protein domain SAR_RS07250 SM00327 von Willebrand factor (vWF) type A domain SAR_RS07275 SM00861 Transketolase, pyrimidine binding domain SAR_RS07280 SM00387 Histidine kinase-like ATPases SAR_RS07280 SM00388 His Kinase A (phosphoacceptor) domain SAR_RS07285 SM00448 cheY-homologous receiver domain SAR_RS07285 SM00862 Transcriptional regulatory protein, C terminal SAR_RS07295 SM00014 Acid phosphatase homologues SAR_RS07310 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SAR_RS07310 SM00245 tail specific protease SAR_RS07365 SM00567 E-Z type HEAT repeats SAR_RS07365 SM00932 Scaffold protein Nfu/NifU N terminal SAR_RS07370 SM00932 Scaffold protein Nfu/NifU N terminal SAR_RS07395 SM00844 GA module SAR_RS07415 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SAR_RS07415 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SAR_RS07420 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SAR_RS07420 SM00475 5'-3' exonuclease SAR_RS07440 SM00981 SAR_RS07440 SAR_RS07480 SM00478 endonuclease III SAR_RS07480 SM00525 SAR_RS07480 SAR_RS07495 SM00479 SAR_RS07495 SAR_RS07495 SM00491 SAR_RS07495 SAR_RS07530 SM00914 SAR_RS07530 SAR_RS07535 SM00028 Tetratricopeptide repeats SAR_RS07555 SM00562 SAR_RS07555 SAR_RS07580 SM00411 bacterial (prokaryotic) histone like domain SAR_RS07595 SM00316 Ribosomal protein S1-like RNA-binding domain SAR_RS07620 SM00870 SAR_RS07620 SAR_RS07635 SM00257 Lysin motif SAR_RS07640 SM00487 DEAD-like helicases superfamily SAR_RS07640 SM00490 helicase superfamily c-terminal domain SAR_RS07685 SM00287 Bacterial SH3 domain homologues SAR_RS07685 SM00646 SAR_RS07685 SAR_RS07750 SM00635 Bacterial Ig-like domain 2 SAR_RS07805 SM00507 HNH nucleases SAR_RS07815 SM00487 DEAD-like helicases superfamily SAR_RS07820 SM00990 SAR_RS07820 SAR_RS07910 SM00482 DNA polymerase A domain SAR_RS07985 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS08025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SAR_RS08025 SM00387 Histidine kinase-like ATPases SAR_RS08025 SM00388 His Kinase A (phosphoacceptor) domain SAR_RS08030 SM00448 cheY-homologous receiver domain SAR_RS08030 SM00862 Transcriptional regulatory protein, C terminal SAR_RS08035 SM00363 S4 RNA-binding domain SAR_RS08100 SM00342 helix_turn_helix, arabinose operon control protein SAR_RS08100 SM00871 Bacterial transcription activator, effector binding domain SAR_RS08105 SM00642 Alpha-amylase domain SAR_RS08110 SM00354 helix_turn _helix lactose operon repressor SAR_RS08135 SM01350 SAR_RS08135 SAR_RS08165 SM00861 Transketolase, pyrimidine binding domain SAR_RS08215 SM00878 Biotin carboxylase C-terminal domain SAR_RS08225 SM00841 Elongation factor P, C-terminal SAR_RS08225 SM01185 SAR_RS08225 SAR_RS08250 SM00450 Rhodanese Homology Domain SAR_RS08310 SM00849 Metallo-beta-lactamase superfamily SAR_RS08365 SM00382 ATPases associated with a variety of cellular activities SAR_RS08370 SM00518 AP endonuclease family 2 SAR_RS08375 SM00487 DEAD-like helicases superfamily SAR_RS08375 SM00490 helicase superfamily c-terminal domain SAR_RS08395 SM00400 zinc finger SAR_RS08395 SM00493 SAR_RS08395 SAR_RS08405 SM00116 Domain in cystathionine beta-synthase and other proteins. SAR_RS08465 SM00729 Elongator protein 3, MiaB family, Radical SAM SAR_RS08480 SM00271 DnaJ molecular chaperone homology domain SAR_RS08500 SM00729 Elongator protein 3, MiaB family, Radical SAM SAR_RS08505 SM00838 Elongation factor G C-terminus SAR_RS08520 SM00849 Metallo-beta-lactamase superfamily SAR_RS08530 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAR_RS08545 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAR_RS08555 SM01103 SAR_RS08555 SAR_RS08620 SM00878 Biotin carboxylase C-terminal domain SAR_RS08630 SM00797 Allophanate hydrolase subunit 2 SAR_RS08635 SM00796 Allophanate hydrolase subunit 1 SAR_RS08670 SM00732 Likely ribonuclease with RNase H fold. SAR_RS08680 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SAR_RS08685 SM00382 ATPases associated with a variety of cellular activities SAR_RS08690 SM00028 Tetratricopeptide repeats SAR_RS08725 SM00382 ATPases associated with a variety of cellular activities SAR_RS08750 SM00287 Bacterial SH3 domain homologues SAR_RS08750 SM00646 SAR_RS08750 SAR_RS08760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAR_RS08760 SM00954 Region found in RelA / SpoT proteins SAR_RS08780 SM01323 SAR_RS08780 SAR_RS08795 SM00382 ATPases associated with a variety of cellular activities SAR_RS08800 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAR_RS08860 SM00650 Ribosomal RNA adenine dimethylases SAR_RS08930 SM01004 Delta-aminolevulinic acid dehydratase SAR_RS08960 SM00382 ATPases associated with a variety of cellular activities SAR_RS08960 SM00994 ClpX C4-type zinc finger SAR_RS08960 SM01086 C-terminal, D2-small domain, of ClpB protein SAR_RS09010 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SAR_RS09035 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAR_RS09045 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SAR_RS09045 SM01232 SAR_RS09045 SAR_RS09050 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SAR_RS09050 SM00474 3'-5' exonuclease SAR_RS09050 SM00475 5'-3' exonuclease SAR_RS09050 SM00482 DNA polymerase A domain SAR_RS09060 SM00387 Histidine kinase-like ATPases SAR_RS09060 SM00388 His Kinase A (phosphoacceptor) domain SAR_RS09065 SM00448 cheY-homologous receiver domain SAR_RS09065 SM00862 Transcriptional regulatory protein, C terminal SAR_RS09075 SM01329 SAR_RS09075 SAR_RS09110 SM00919 Malic enzyme, NAD binding domain SAR_RS09110 SM01274 SAR_RS09110 SAR_RS09115 SM00481 DNA polymerase alpha chain like domain SAR_RS09125 SM00116 Domain in cystathionine beta-synthase and other proteins. SAR_RS09135 SM00849 Metallo-beta-lactamase superfamily SAR_RS09150 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SAR_RS09150 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SAR_RS09180 SM00981 SAR_RS09180 SAR_RS09200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SAR_RS09205 SM00363 S4 RNA-binding domain SAR_RS09205 SM01390 SAR_RS09205 SAR_RS09250 SM00563 Phosphate acyltransferases SAR_RS09255 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SAR_RS09260 SM00363 S4 RNA-binding domain SAR_RS09305 SM00354 helix_turn _helix lactose operon repressor SAR_RS09315 SM00830 Chorismate mutase type II SAR_RS09340 SM00843 SAR_RS09340 SAR_RS09370 SM00849 Metallo-beta-lactamase superfamily SAR_RS09385 SM00857 Resolvase, N terminal domain SAR_RS09430 SM00363 S4 RNA-binding domain SAR_RS09450 SM00450 Rhodanese Homology Domain SAR_RS09465 SM00729 Elongator protein 3, MiaB family, Radical SAM SAR_RS09475 SM00347 helix_turn_helix multiple antibiotic resistance protein SAR_RS09520 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SAR_RS09530 SM00047 Lysozyme subfamily 2 SAR_RS09615 SM01234 SAR_RS09615 SAR_RS09635 SM00894 Excalibur calcium-binding domain SAR_RS09660 SM00901 SAR_RS09660 SAR_RS09780 SM00974 SAR_RS09780 SAR_RS09905 SM00382 ATPases associated with a variety of cellular activities SAR_RS09930 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAR_RS09960 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS09965 SM00421 helix_turn_helix, Lux Regulon SAR_RS09965 SM00448 cheY-homologous receiver domain SAR_RS10015 SM00382 ATPases associated with a variety of cellular activities SAR_RS10020 SM00062 Bacterial periplasmic substrate-binding proteins SAR_RS10210 SM00382 ATPases associated with a variety of cellular activities SAR_RS10220 SM00478 endonuclease III SAR_RS10290 SM00226 Low molecular weight phosphatase family SAR_RS10305 SM00421 helix_turn_helix, Lux Regulon SAR_RS10305 SM00448 cheY-homologous receiver domain SAR_RS10310 SM00387 Histidine kinase-like ATPases SAR_RS10365 SM00479 SAR_RS10365 SAR_RS10385 SM00046 Diacylglycerol kinase catalytic domain (presumed) SAR_RS10395 SM00845 GatB domain SAR_RS10420 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAR_RS10420 SM00292 breast cancer carboxy-terminal domain SAR_RS10420 SM00532 Ligase N family SAR_RS10440 SM00998 Adenylosuccinate lyase C-terminus SAR_RS10495 SM00710 Parallel beta-helix repeats SAR_RS10505 SM01131 SAR_RS10505 SAR_RS10565 SM00382 ATPases associated with a variety of cellular activities SAR_RS10575 SM00382 ATPases associated with a variety of cellular activities SAR_RS10580 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAR_RS10640 SM00287 Bacterial SH3 domain homologues SAR_RS10770 SM00507 HNH nucleases SAR_RS10910 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS10920 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS10925 SM00479 SAR_RS10925 SAR_RS11000 SM00883 Chaperonin 10 Kd subunit SAR_RS11030 SM00793 Accessory gene regulator B SAR_RS11035 SM00794 Staphylococcal AgrD protein SAR_RS11045 SM00448 cheY-homologous receiver domain SAR_RS11045 SM00850 LytTr DNA-binding domain SAR_RS11055 SM00640 Glycosyl hydrolases family 32 SAR_RS11060 SM00354 helix_turn _helix lactose operon repressor SAR_RS11080 SM00881 CoA binding domain SAR_RS11085 SM00382 ATPases associated with a variety of cellular activities SAR_RS11095 SM00534 ATPase domain of DNA mismatch repair MUTS family SAR_RS11145 SM00917 LeuA allosteric (dimerisation) domain SAR_RS11150 SM01329 SAR_RS11150 SAR_RS11200 SM00731 SprT homologues. SAR_RS11205 SM00316 Ribosomal protein S1-like RNA-binding domain SAR_RS11205 SM00732 Likely ribonuclease with RNase H fold. SAR_RS11225 SM00331 Sigma factor PP2C-like phosphatases SAR_RS11225 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SAR_RS11245 SM01005 Alanine racemase, C-terminal domain SAR_RS11290 SM00387 Histidine kinase-like ATPases SAR_RS11290 SM00388 His Kinase A (phosphoacceptor) domain SAR_RS11295 SM00448 cheY-homologous receiver domain SAR_RS11295 SM00862 Transcriptional regulatory protein, C terminal SAR_RS11300 SM00487 DEAD-like helicases superfamily SAR_RS11300 SM00490 helicase superfamily c-terminal domain SAR_RS11340 SM00155 Phospholipase D. Active site motifs. SAR_RS11345 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAR_RS11425 SM00382 ATPases associated with a variety of cellular activities SAR_RS11485 SM00226 Low molecular weight phosphatase family SAR_RS11500 SM00937 SAR_RS11500 SAR_RS11520 SM00357 Cold shock protein domain SAR_RS11520 SM00382 ATPases associated with a variety of cellular activities SAR_RS11520 SM00959 Rho termination factor, N-terminal domain SAR_RS11595 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SAR_RS11605 SM01133 SAR_RS11605 SAR_RS11645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SAR_RS11675 SM00382 ATPases associated with a variety of cellular activities SAR_RS11890 SM00829 Enoylreductase SAR_RS11895 SM00829 Enoylreductase SAR_RS11920 SM01133 SAR_RS11920 SAR_RS11940 SM00420 helix_turn_helix, Deoxyribose operon repressor SAR_RS11940 SM01134 SAR_RS11940 SAR_RS11975 SM00422 helix_turn_helix, mercury resistance SAR_RS12050 SM00382 ATPases associated with a variety of cellular activities SAR_RS12055 SM00382 ATPases associated with a variety of cellular activities SAR_RS12075 SM00662 RNA polymerases D SAR_RS12095 SM00316 Ribosomal protein S1-like RNA-binding domain SAR_RS12150 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SAR_RS12155 SM01374 SAR_RS12155 SAR_RS12175 SM00322 K homology RNA-binding domain SAR_RS12190 SM01382 SAR_RS12190 SAR_RS12190 SM01383 SAR_RS12190 SAR_RS12210 SM01403 SAR_RS12210 SAR_RS12225 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SAR_RS12225 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SAR_RS12225 SM00493 SAR_RS12225 SAR_RS12280 SM00347 helix_turn_helix multiple antibiotic resistance protein SAR_RS12305 SM00729 Elongator protein 3, MiaB family, Radical SAM SAR_RS12330 SM00852 Probable molybdopterin binding domain SAR_RS12340 SM00852 Probable molybdopterin binding domain SAR_RS12350 SM00382 ATPases associated with a variety of cellular activities SAR_RS12415 SM00988 UreE urease accessory protein, N-terminal domain SAR_RS12455 SM00342 helix_turn_helix, arabinose operon control protein SAR_RS12510 SM00047 Lysozyme subfamily 2 SAR_RS12525 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SAR_RS12525 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SAR_RS12540 SM00420 helix_turn_helix, Deoxyribose operon repressor SAR_RS12695 SM00382 ATPases associated with a variety of cellular activities SAR_RS12785 SM00347 helix_turn_helix multiple antibiotic resistance protein SAR_RS12795 SM00382 ATPases associated with a variety of cellular activities SAR_RS12805 SM00448 cheY-homologous receiver domain SAR_RS12805 SM00862 Transcriptional regulatory protein, C terminal SAR_RS12810 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SAR_RS12810 SM00387 Histidine kinase-like ATPases SAR_RS12810 SM00388 His Kinase A (phosphoacceptor) domain SAR_RS12815 SM00850 LytTr DNA-binding domain SAR_RS12830 SM00382 ATPases associated with a variety of cellular activities SAR_RS12865 SM00829 Enoylreductase SAR_RS12920 SM00342 helix_turn_helix, arabinose operon control protein SAR_RS12950 SM00347 helix_turn_helix multiple antibiotic resistance protein SAR_RS12975 SM00421 helix_turn_helix, Lux Regulon SAR_RS12975 SM00448 cheY-homologous receiver domain SAR_RS12980 SM00387 Histidine kinase-like ATPases SAR_RS13005 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SAR_RS13085 SM00382 ATPases associated with a variety of cellular activities SAR_RS13095 SM00062 Bacterial periplasmic substrate-binding proteins SAR_RS13095 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SAR_RS13110 SM00855 Phosphoglycerate mutase family SAR_RS13165 SM00729 Elongator protein 3, MiaB family, Radical SAM SAR_RS13165 SM00876 Biotin and Thiamin Synthesis associated domain SAR_RS13190 SM00382 ATPases associated with a variety of cellular activities SAR_RS13195 SM00382 ATPases associated with a variety of cellular activities SAR_RS13230 SM00871 Bacterial transcription activator, effector binding domain SAR_RS13310 SM00116 Domain in cystathionine beta-synthase and other proteins. SAR_RS13310 SM00382 ATPases associated with a variety of cellular activities SAR_RS13350 SM00382 ATPases associated with a variety of cellular activities SAR_RS13380 SM00382 ATPases associated with a variety of cellular activities SAR_RS13385 SM00382 ATPases associated with a variety of cellular activities SAR_RS13510 SM00487 DEAD-like helicases superfamily SAR_RS13510 SM00490 helicase superfamily c-terminal domain SAR_RS13565 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAR_RS13565 SM00895 SAR_RS13565 SAR_RS13570 SM00422 helix_turn_helix, mercury resistance SAR_RS13575 SM00954 Region found in RelA / SpoT proteins SAR_RS13610 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAR_RS13615 SM00382 ATPases associated with a variety of cellular activities SAR_RS13645 SM00347 helix_turn_helix multiple antibiotic resistance protein SAR_RS13795 SM00382 ATPases associated with a variety of cellular activities SAR_RS13795 SM01086 C-terminal, D2-small domain, of ClpB protein SAR_RS13810 SM00899 SAR_RS13810 SAR_RS13835 SM01266 SAR_RS13835 SAR_RS14030 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SAR_RS14210 SM00382 ATPases associated with a variety of cellular activities SAR_RS14215 SM00387 Histidine kinase-like ATPases SAR_RS14220 SM00448 cheY-homologous receiver domain SAR_RS14220 SM00862 Transcriptional regulatory protein, C terminal SAR_RS14240 SM00098 Alkaline phosphatase homologues SAR_RS14245 SM00347 helix_turn_helix multiple antibiotic resistance protein SAR_RS14330 SM00047 Lysozyme subfamily 2 SAR_RS14355 SM00957 SecA DEAD-like domain SAR_RS14355 SM00958 SecA preprotein cross-linking domain SAR_RS14385 SM00903 Flavin reductase like domain SAR_RS14410 SM00903 Flavin reductase like domain SAR_RS14535 SM00382 ATPases associated with a variety of cellular activities SAR_RS14550 SM00867 YceI-like domain SAR_RS14560 SM00450 Rhodanese Homology Domain SAR_RS14610 SM00382 ATPases associated with a variety of cellular activities SAR_RS14645 SM00357 Cold shock protein domain SAR_RS14650 SM00530 Helix-turn-helix XRE-family like proteins SAR_RS14670 SM00470 ParB-like nuclease domain SAR_RS14680 SM01228 SAR_RS14680