locus-tag	class	description
SAHV_RS00015	COG2501	S4 domain
SAHV_RS00035	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
SAHV_RS00060	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
SAHV_RS00070	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
SAHV_RS00080	COG0305	Participates in initiation and elongation during chromosome replication
SAHV_RS00110	COG4863	YycH protein
SAHV_RS00120	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
SAHV_RS00125	COG0737	Belongs to the 5'-nucleotidase family
SAHV_RS00185	COG0584	glycerophosphoryl diester phosphodiesterase
SAHV_RS00190	COG2030	dehydratase
SAHV_RS00210	COG1846	Transcriptional regulator
SAHV_RS00210	COG1940	carbohydrate kinase activity
SAHV_RS00220	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SAHV_RS00225	COG2210	Belongs to the sulfur carrier protein TusA family
SAHV_RS00230	COG1937	Protein conserved in bacteria
SAHV_RS00235	COG0730	response to heat
SAHV_RS00240	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
SAHV_RS00270	COG2003	Belongs to the UPF0758 family
SAHV_RS00315	COG2801	Transposase and inactivated derivatives
SAHV_RS00325	COG1288	antiporter activity
SAHV_RS00330	COG0745	RESPONSE REGULATOR receiver
SAHV_RS00335	COG2205	protein histidine kinase activity
SAHV_RS00410	COG0730	response to heat
SAHV_RS00415	COG1937	Protein conserved in bacteria
SAHV_RS00420	COG2210	Belongs to the sulfur carrier protein TusA family
SAHV_RS00425	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SAHV_RS00470	COG0823	Involved in the tonB-independent uptake of proteins
SAHV_RS00505	COG1473	amidohydrolase
SAHV_RS00515	COG1283	sodium-dependent phosphate transmembrane transporter activity
SAHV_RS00520	COG4716	Myosin-crossreactive antigen
SAHV_RS00525	COG0697	spore germination
SAHV_RS00540	COG1620	l-lactate permease
SAHV_RS00555	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAHV_RS00560	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAHV_RS00565	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SAHV_RS00575	COG2423	ornithine cyclodeaminase activity
SAHV_RS00580	COG4264	IucA IucC family
SAHV_RS00585	COG2814	Major facilitator Superfamily
SAHV_RS00590	COG4264	IucA IucC family
SAHV_RS00595	COG4264	IucA IucC family
SAHV_RS00605	COG0019	diaminopimelate decarboxylase activity
SAHV_RS00610	COG1475	DNA binding
SAHV_RS00635	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SAHV_RS00640	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SAHV_RS00645	COG0438	transferase activity, transferring glycosyl groups
SAHV_RS00680	COG0813	purine-nucleoside phosphorylase activity
SAHV_RS00685	COG2814	Major facilitator Superfamily
SAHV_RS00705	COG3639	organic phosphonate transmembrane transporter activity
SAHV_RS00725	COG0737	Belongs to the 5'-nucleotidase family
SAHV_RS00740	COG1454	alcohol dehydrogenase
SAHV_RS00740	COG1012	belongs to the aldehyde dehydrogenase family
SAHV_RS00765	COG1086	Polysaccharide biosynthesis protein
SAHV_RS00775	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
SAHV_RS00805	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SAHV_RS00815	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
SAHV_RS00820	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
SAHV_RS00830	COG2832	Protein of unknown function (DUF454)
SAHV_RS00870	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SAHV_RS00875	COG1960	acyl-CoA dehydrogenase activity
SAHV_RS00880	COG5609	conserved protein (DUF2294)
SAHV_RS00930	COG1114	Component of the transport system for branched-chain amino acids
SAHV_RS00935	COG1335	isochorismatase
SAHV_RS00940	COG3961	Belongs to the TPP enzyme family
SAHV_RS00970	COG1737	Transcriptional regulator
SAHV_RS00995	COG1136	(ABC) transporter
SAHV_RS01000	COG1136	(ABC) transporter
SAHV_RS01000	COG0577	efflux transmembrane transporter activity
SAHV_RS01020	COG1131	(ABC) transporter
SAHV_RS01035	COG0601	transmembrane transport
SAHV_RS01040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SAHV_RS01050	COG0405	Gamma-glutamyltransferase
SAHV_RS01070	COG3842	ATPase activity
SAHV_RS01080	COG1175	transmembrane transport
SAHV_RS01085	COG3833	ABC-type maltose transport systems, permease component
SAHV_RS01090	COG0673	inositol 2-dehydrogenase activity
SAHV_RS01095	COG0673	inositol 2-dehydrogenase activity
SAHV_RS01105	COG1755	Isoprenylcysteine carboxyl methyltransferase
SAHV_RS01165	COG0183	Belongs to the thiolase family
SAHV_RS01175	COG1960	acyl-CoA dehydrogenase activity
SAHV_RS01180	COG0318	PFAM AMP-dependent synthetase and ligase
SAHV_RS01195	COG0747	negative chemotaxis
SAHV_RS01200	COG3189	MarR family transcriptional regulator
SAHV_RS01230	COG2190	(PTS) system
SAHV_RS01230	COG1263	PTS System
SAHV_RS01230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAHV_RS01235	COG1957	nucleoside hydrolase
SAHV_RS01255	COG3414	Phosphotransferase system galactitol-specific IIB component
SAHV_RS01260	COG3775	system Galactitol-specific IIC component
SAHV_RS01265	COG1063	alcohol dehydrogenase
SAHV_RS01275	COG1063	alcohol dehydrogenase
SAHV_RS01285	COG1063	alcohol dehydrogenase
SAHV_RS01290	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
SAHV_RS01295	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
SAHV_RS01305	COG1063	alcohol dehydrogenase
SAHV_RS01310	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
SAHV_RS01345	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SAHV_RS01350	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAHV_RS01350	COG1263	PTS System
SAHV_RS01350	COG2190	(PTS) system
SAHV_RS01355	COG2723	6-phospho-beta-galactosidase activity
SAHV_RS01365	COG2226	methyltransferase
SAHV_RS01420	COG1131	(ABC) transporter
SAHV_RS01440	COG3942	CHAP domain
SAHV_RS01440	COG1388	LysM domain
SAHV_RS01560	COG1114	Component of the transport system for branched-chain amino acids
SAHV_RS01565	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
SAHV_RS01575	COG0577	efflux transmembrane transporter activity
SAHV_RS01600	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SAHV_RS01605	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
SAHV_RS01630	COG3314	Sporulation integral membrane protein YlbJ
SAHV_RS01655	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SAHV_RS01685	COG3037	sugar-specific permease SgaT UlaA
SAHV_RS01695	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SAHV_RS01700	COG3711	transcriptional antiterminator
SAHV_RS01720	COG2271	Major facilitator Superfamily
SAHV_RS01725	COG2271	Major facilitator Superfamily
SAHV_RS01730	COG0346	lactoylglutathione lyase activity
SAHV_RS01735	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SAHV_RS01740	COG0431	NADPH-dependent FMN reductase
SAHV_RS01755	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SAHV_RS01760	COG2822	iron ion transport
SAHV_RS01770	COG0672	)-iron permease
SAHV_RS01775	COG0805	protein transport
SAHV_RS01780	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SAHV_RS01790	COG1476	TRANSCRIPTIONal
SAHV_RS01800	COG1131	(ABC) transporter
SAHV_RS01835	COG0646	methionine synthase
SAHV_RS01835	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
SAHV_RS01840	COG0626	cystathionine gamma-synthase activity
SAHV_RS01845	COG0626	cystathionine gamma-synthase activity
SAHV_RS01850	COG1475	DNA binding
SAHV_RS01855	COG0668	transmembrane transport
SAHV_RS01860	COG4481	Protein conserved in bacteria
SAHV_RS01865	COG0012	GTP binding
SAHV_RS01965	COG1823	symporter activity
SAHV_RS02000	COG2233	PERMEase
SAHV_RS02015	COG0582	viral genome integration into host DNA
SAHV_RS02050	COG0741	lytic transglycosylase activity
SAHV_RS02050	COG0791	NLP P60 protein
SAHV_RS02095	COG2946	Replication initiation factor
SAHV_RS02100	COG1674	ftsk spoiiie
SAHV_RS02130	COG3328	transposase activity
SAHV_RS02155	COG3759	membrane
SAHV_RS02320	COG0523	cobalamin synthesis protein
SAHV_RS02330	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SAHV_RS02340	COG5609	conserved protein (DUF2294)
SAHV_RS02355	COG1647	Serine aminopeptidase, S33
SAHV_RS02360	COG0733	neurotransmitter:sodium symporter activity
SAHV_RS02365	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SAHV_RS02370	COG0626	cystathionine gamma-synthase activity
SAHV_RS02380	COG2011	ABC-type metal ion transport system permease component
SAHV_RS02385	COG1464	Belongs to the NlpA lipoprotein family
SAHV_RS02420	COG0583	DNA-binding transcription factor activity
SAHV_RS02425	COG0069	glutamate synthase activity
SAHV_RS02425	COG0070	glutamate synthase
SAHV_RS02425	COG0067	glutamate synthase
SAHV_RS02430	COG0493	'glutamate synthase
SAHV_RS02440	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAHV_RS02440	COG1263	PTS System
SAHV_RS02445	COG0366	Alpha amylase catalytic
SAHV_RS02450	COG2188	Transcriptional regulator
SAHV_RS02465	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SAHV_RS02500	COG1982	Orn Lys Arg decarboxylase major
SAHV_RS02510	COG3870	Protein conserved in bacteria
SAHV_RS02520	COG0470	DNA polymerase III
SAHV_RS02525	COG1774	PSP1 C-terminal conserved region
SAHV_RS02535	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
SAHV_RS02545	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
SAHV_RS02560	COG0084	hydrolase, TatD family'
SAHV_RS02565	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
SAHV_RS02575	COG4466	Protein conserved in bacteria
SAHV_RS02585	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SAHV_RS02590	COG0251	oxidation-reduction process
SAHV_RS02635	COG2244	polysaccharide biosynthetic process
SAHV_RS02640	COG3956	TIGRFAM MazG family protein
SAHV_RS02645	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SAHV_RS02655	COG1098	S1 RNA binding domain
SAHV_RS02670	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SAHV_RS02695	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SAHV_RS02775	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SAHV_RS02790	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SAHV_RS02800	COG3880	PFAM UvrB UvrC protein
SAHV_RS02820	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
SAHV_RS02825	COG4956	integral membrane protein (PIN domain superfamily)
SAHV_RS02845	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
SAHV_RS02895	COG2813	Specifically methylates the guanine in position
SAHV_RS02935	COG1473	amidohydrolase
SAHV_RS02965	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
SAHV_RS02970	COG1428	Deoxynucleoside kinase
SAHV_RS02975	COG1428	Deoxynucleoside kinase
SAHV_RS02985	COG0561	phosphatase activity
SAHV_RS03025	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
SAHV_RS03040	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
SAHV_RS03130	COG0095	Lipoate-protein ligase
SAHV_RS03135	COG0083	homoserine kinase activity
SAHV_RS03155	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SAHV_RS03190	COG0667	Aldo Keto reductase
SAHV_RS03200	COG0655	NAD(P)H dehydrogenase (quinone) activity
SAHV_RS03210	COG1078	dGTPase activity
SAHV_RS03245	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SAHV_RS03250	COG4139	cobalamin transport
SAHV_RS03300	COG4974	Belongs to the 'phage' integrase family
SAHV_RS03350	COG0803	Belongs to the bacterial solute-binding protein 9 family
SAHV_RS03355	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SAHV_RS03360	COG1121	(ABC) transporter
SAHV_RS03365	COG1321	iron dependent repressor
SAHV_RS03375	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
SAHV_RS03385	COG1682	transport, permease protein
SAHV_RS03390	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
SAHV_RS03400	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
SAHV_RS03405	COG1686	Belongs to the peptidase S11 family
SAHV_RS03410	COG1132	(ABC) transporter
SAHV_RS03415	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SAHV_RS03425	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SAHV_RS03430	COG1120	ATPase activity
SAHV_RS03435	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAHV_RS03440	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAHV_RS03445	COG2376	Dihydroxyacetone kinase
SAHV_RS03455	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
SAHV_RS03465	COG3949	Membrane
SAHV_RS03490	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SAHV_RS03505	COG1136	(ABC) transporter
SAHV_RS03510	COG0577	efflux transmembrane transporter activity
SAHV_RS03515	COG1392	Phosphate transport regulator
SAHV_RS03520	COG0306	phosphate transporter
SAHV_RS03525	COG1388	LysM domain
SAHV_RS03525	COG3942	CHAP domain
SAHV_RS03535	COG1917	Cupin 2, conserved barrel domain protein
SAHV_RS03535	COG4977	sequence-specific DNA binding
SAHV_RS03565	COG0583	DNA-binding transcription factor activity
SAHV_RS03570	COG2814	Major facilitator Superfamily
SAHV_RS03575	COG2839	Protein conserved in bacteria
SAHV_RS03605	COG1611	Belongs to the LOG family
SAHV_RS03625	COG4988	ABC transporter
SAHV_RS03630	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
SAHV_RS03640	COG0523	cobalamin synthesis protein
SAHV_RS03645	COG4989	oxidoreductase activity
SAHV_RS03655	COG0471	metal ion transport
SAHV_RS03660	COG0415	Belongs to the DNA photolyase family
SAHV_RS03690	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
SAHV_RS03695	COG1349	DNA-binding transcription factor activity
SAHV_RS03700	COG1105	Belongs to the carbohydrate kinase PfkB family
SAHV_RS03705	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SAHV_RS03705	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SAHV_RS03705	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SAHV_RS03715	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
SAHV_RS03720	COG1253	flavin adenine dinucleotide binding
SAHV_RS03725	COG0656	L-ascorbic acid biosynthetic process
SAHV_RS03730	COG0463	Glycosyl transferase, family 2
SAHV_RS03765	COG0720	synthase
SAHV_RS03775	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
SAHV_RS03775	COG0512	Glutamine amidotransferase of anthranilate synthase
SAHV_RS03780	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SAHV_RS03815	COG0488	(ABC) transporter
SAHV_RS03820	COG0514	ATP-dependent DNA helicase (RecQ)
SAHV_RS03825	COG1125	glycine betaine transport
SAHV_RS03825	COG0517	IMP dehydrogenase activity
SAHV_RS03830	COG1174	glycine betaine transport
SAHV_RS03860	COG3104	oligopeptide transport
SAHV_RS03880	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SAHV_RS03885	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SAHV_RS03895	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAHV_RS03900	COG4605	iron ion homeostasis
SAHV_RS03905	COG4604	ABC transporter, ATP-binding protein
SAHV_RS03910	COG4607	ABC-type enterochelin transport system periplasmic component
SAHV_RS03965	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SAHV_RS03970	COG1739	Uncharacterized protein family UPF0029
SAHV_RS03980	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
SAHV_RS03985	COG1040	competence protein
SAHV_RS04015	COG3942	CHAP domain
SAHV_RS04015	COG1388	LysM domain
SAHV_RS04075	COG0391	Required for morphogenesis under gluconeogenic growth conditions
SAHV_RS04140	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
SAHV_RS04145	COG1647	Serine aminopeptidase, S33
SAHV_RS04150	COG0557	exoribonuclease II activity
SAHV_RS04245	COG5484	DNA packaging
SAHV_RS04245	COG3728	DNA packaging
SAHV_RS04260	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SAHV_RS04265	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
SAHV_RS04330	COG1278	Cold shock
SAHV_RS04370	COG0406	alpha-ribazole phosphatase activity
SAHV_RS04375	COG1279	arginine transmembrane transporter activity
SAHV_RS04400	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SAHV_RS04405	COG1393	Belongs to the ArsC family
SAHV_RS04420	COG3878	Protein conserved in bacteria
SAHV_RS04430	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
SAHV_RS04445	COG2011	ABC-type metal ion transport system permease component
SAHV_RS04450	COG1464	Belongs to the NlpA lipoprotein family
SAHV_RS04465	COG0396	ATPase activity
SAHV_RS04470	COG0719	Fe-S assembly protein
SAHV_RS04480	COG0822	iron-sulfur transferase activity
SAHV_RS04605	COG1484	DNA-dependent DNA replication
SAHV_RS04695	COG1783	phage Terminase large subunit
SAHV_RS04825	COG5632	N-Acetylmuramoyl-L-alanine amidase
SAHV_RS04825	COG1388	LysM domain
SAHV_RS04865	COG1253	flavin adenine dinucleotide binding
SAHV_RS04880	COG1801	Protein of unknown function DUF72
SAHV_RS04885	COG0730	response to heat
SAHV_RS04900	COG4470	Protein conserved in bacteria
SAHV_RS04915	COG2445	Protein of unknown function DUF86
SAHV_RS04945	COG1696	Membrane protein involved in D-alanine export
SAHV_RS04955	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
SAHV_RS04960	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
SAHV_RS04965	COG4837	Protein of unknown function (DUF1462)
SAHV_RS04970	COG1252	NADH dehydrogenase
SAHV_RS04980	COG0316	Belongs to the HesB IscA family
SAHV_RS04990	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
SAHV_RS04995	COG2056	Na+-H+ antiporter family
SAHV_RS05000	COG2050	protein possibly involved in aromatic compounds catabolism
SAHV_RS05055	COG1098	S1 RNA binding domain
SAHV_RS05060	COG1902	pentaerythritol trinitrate reductase activity
SAHV_RS05075	COG0584	glycerophosphoryl diester phosphodiesterase
SAHV_RS05095	COG0398	Pfam SNARE associated Golgi protein
SAHV_RS05135	COG0561	phosphatase activity
SAHV_RS05160	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
SAHV_RS05175	COG1881	PFAM PEBP family protein
SAHV_RS05205	COG0601	transmembrane transport
SAHV_RS05210	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SAHV_RS05215	COG0444	Belongs to the ABC transporter superfamily
SAHV_RS05220	COG4608	Belongs to the ABC transporter superfamily
SAHV_RS05225	COG4166	transmembrane transport
SAHV_RS05230	COG0747	negative chemotaxis
SAHV_RS05235	COG0444	Belongs to the ABC transporter superfamily
SAHV_RS05240	COG4608	Belongs to the ABC transporter superfamily
SAHV_RS05245	COG0601	transmembrane transport
SAHV_RS05250	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SAHV_RS05275	COG1164	Oligoendopeptidase f
SAHV_RS05285	COG2346	COG2346, Truncated hemoglobins
SAHV_RS05300	COG2357	RelA SpoT domain protein
SAHV_RS05310	COG0564	pseudouridine synthase activity
SAHV_RS05315	COG2239	Acts as a magnesium transporter
SAHV_RS05320	COG0475	glutathione-regulated potassium exporter activity
SAHV_RS05320	COG0569	domain protein
SAHV_RS05330	COG0628	permease
SAHV_RS05335	COG1115	amino acid carrier protein
SAHV_RS05375	COG0861	Integral membrane protein TerC family
SAHV_RS05385	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SAHV_RS05390	COG0737	Belongs to the 5'-nucleotidase family
SAHV_RS05405	COG4903	ComK protein
SAHV_RS05420	COG4873	Protein conserved in bacteria
SAHV_RS05465	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
SAHV_RS05475	COG2314	TM2 domain
SAHV_RS05480	COG0456	acetyltransferase
SAHV_RS05485	COG1575	Belongs to the MenA family. Type 1 subfamily
SAHV_RS05490	COG1169	isochorismate synthase
SAHV_RS05500	COG2267	carboxylic ester hydrolase activity
SAHV_RS05525	COG0436	Aminotransferase
SAHV_RS05530	COG3594	Acyltransferase
SAHV_RS05560	COG1316	TRANSCRIPTIONal
SAHV_RS05605	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SAHV_RS05620	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SAHV_RS05660	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
SAHV_RS05665	COG4172	Belongs to the ABC transporter superfamily
SAHV_RS05670	COG4721	ABC-type cobalt transport system, permease component
SAHV_RS05695	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
SAHV_RS05715	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
SAHV_RS05720	COG1271	oxidase subunit
SAHV_RS05725	COG1294	oxidase, subunit
SAHV_RS05730	COG0569	domain protein
SAHV_RS05795	COG1176	ABC-type spermidine putrescine transport system, permease component I
SAHV_RS05800	COG1177	transmembrane transport
SAHV_RS05805	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
SAHV_RS05830	COG0483	inositol monophosphate 1-phosphatase activity
SAHV_RS05840	COG1217	gtp-binding protein TYPA
SAHV_RS05850	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
SAHV_RS05860	COG0772	Belongs to the SEDS family
SAHV_RS05895	COG3679	Belongs to the UPF0342 family
SAHV_RS05915	COG0742	ribosomal rna small subunit methyltransferase
SAHV_RS05975	COG4509	Sortase family
SAHV_RS05990	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SAHV_RS06020	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
SAHV_RS06020	COG1796	DNA polymerase
SAHV_RS06045	COG2009	succinate dehydrogenase
SAHV_RS06050	COG1053	succinate dehydrogenase
SAHV_RS06055	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
SAHV_RS06180	COG1288	antiporter activity
SAHV_RS06215	COG1011	Hydrolase
SAHV_RS06240	COG4839	cell division protein FtsL
SAHV_RS06245	COG0768	penicillin binding
SAHV_RS06260	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
SAHV_RS06265	COG0849	cell division
SAHV_RS06280	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SAHV_RS06290	COG0762	integral membrane protein
SAHV_RS06295	COG2302	S4 RNA-binding domain
SAHV_RS06300	COG3599	regulation of cell shape
SAHV_RS06310	COG2514	catechol 2,3-dioxygenase activity
SAHV_RS06325	COG0564	pseudouridine synthase activity
SAHV_RS06335	COG2233	PERMEase
SAHV_RS06380	COG1293	RNA-binding protein homologous to eukaryotic snRNP
SAHV_RS06395	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SAHV_RS06400	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SAHV_RS06410	COG2314	TM2 domain
SAHV_RS06425	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SAHV_RS06425	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SAHV_RS06435	COG0631	protein serine/threonine phosphatase activity
SAHV_RS06450	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
SAHV_RS06465	COG1302	Protein conserved in bacteria
SAHV_RS06515	COG1196	nuclear chromosome segregation
SAHV_RS06520	COG0552	protein localization to endoplasmic reticulum
SAHV_RS06530	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SAHV_RS06590	COG2348	transferase activity, transferring amino-acyl groups
SAHV_RS06595	COG0758	DNA mediated transformation
SAHV_RS06690	COG0195	Participates in both transcription termination and antitermination
SAHV_RS06695	COG2740	Nucleic-acid-binding protein implicated in transcription termination
SAHV_RS06720	COG0196	riboflavin kinase activity
SAHV_RS06745	COG2188	Transcriptional regulator
SAHV_RS06750	COG0612	Peptidase, M16
SAHV_RS06755	COG0612	Peptidase, M16
SAHV_RS06760	COG0300	oxidoreductase activity
SAHV_RS06780	COG1058	Belongs to the CinA family
SAHV_RS06780	COG1546	Belongs to the CinA family
SAHV_RS06800	COG1692	metallophosphoesterase
SAHV_RS06805	COG0674	pyruvate-flavodoxin oxidoreductase activity
SAHV_RS06805	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
SAHV_RS06810	COG1013	pyruvate-flavodoxin oxidoreductase activity
SAHV_RS06845	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
SAHV_RS06850	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SAHV_RS06875	COG1923	regulation of RNA biosynthetic process
SAHV_RS06885	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
SAHV_RS06890	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
SAHV_RS06895	COG0789	Transcriptional regulator
SAHV_RS06990	COG2197	response regulator
SAHV_RS07000	COG1525	nuclease
SAHV_RS07015	COG0527	aspartate kinase activity
SAHV_RS07020	COG0460	homoserine dehydrogenase
SAHV_RS07025	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
SAHV_RS07050	COG0833	amino acid
SAHV_RS07080	COG2340	Cysteine-rich secretory protein family
SAHV_RS07115	COG4846	Membrane protein involved in cytochrome C biogenesis
SAHV_RS07135	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SAHV_RS07145	COG0824	Thioesterase
SAHV_RS07175	COG1115	amino acid carrier protein
SAHV_RS07190	COG0628	permease
SAHV_RS07215	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
SAHV_RS07225	COG1363	Peptidase, m42
SAHV_RS07230	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SAHV_RS07235	COG0512	Glutamine amidotransferase of anthranilate synthase
SAHV_RS07280	COG0561	phosphatase activity
SAHV_RS07325	COG0704	Plays a role in the regulation of phosphate uptake
SAHV_RS07335	COG0581	inorganic phosphate transmembrane transporter activity
SAHV_RS07340	COG0573	inorganic phosphate transmembrane transporter activity
SAHV_RS07365	COG0488	(ABC) transporter
SAHV_RS07370	COG0527	aspartate kinase activity
SAHV_RS07375	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SAHV_RS07450	COG4548	von Willebrand factor, type A
SAHV_RS07455	COG0714	Associated with various cellular activities
SAHV_RS07500	COG0671	phosphoesterase, PA-phosphatase related
SAHV_RS07580	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
SAHV_RS07610	COG0531	amino acid
SAHV_RS07625	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SAHV_RS07630	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
SAHV_RS07650	COG0116	Belongs to the methyltransferase superfamily
SAHV_RS07680	COG4499	WXG100 protein secretion system (Wss), protein YukC
SAHV_RS07680	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SAHV_RS07690	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SAHV_RS07695	COG3935	DnaD domain protein
SAHV_RS07720	COG0438	transferase activity, transferring glycosyl groups
SAHV_RS07725	COG1694	Mazg nucleotide pyrophosphohydrolase
SAHV_RS07730	COG2738	Putative neutral zinc metallopeptidase
SAHV_RS07735	COG4347	Protein of unknown function (DUF1405)
SAHV_RS07775	COG0142	geranyltranstransferase activity
SAHV_RS07840	COG0492	ferredoxin-NADP+ reductase activity
SAHV_RS07855	COG0514	ATP-dependent DNA helicase (RecQ)
SAHV_RS07865	COG1141	Ferredoxin
SAHV_RS07915	COG0745	RESPONSE REGULATOR receiver
SAHV_RS07920	COG1187	pseudouridine synthase activity
SAHV_RS07945	COG0735	belongs to the Fur family
SAHV_RS07950	COG0494	nUDIX hydrolase
SAHV_RS07955	COG0667	Aldo Keto reductase
SAHV_RS07965	COG4221	oxidoreductase activity
SAHV_RS07980	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
SAHV_RS07990	COG0366	Alpha amylase catalytic
SAHV_RS07995	COG1609	Transcriptional regulator
SAHV_RS08020	COG2195	Cleaves the N-terminal amino acid of tripeptides
SAHV_RS08030	COG4129	membrane
SAHV_RS08040	COG0508	dehydrogenase complex catalyzes the overall conversion of
SAHV_RS08045	COG0022	dehydrogenase e1 component
SAHV_RS08050	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SAHV_RS08055	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SAHV_RS08060	COG0497	DNA recombination
SAHV_RS08090	COG1302	Protein conserved in bacteria
SAHV_RS08095	COG0439	Biotin carboxylase
SAHV_RS08100	COG0511	ligase activity, forming carbon-carbon bonds
SAHV_RS08110	COG0006	proline dipeptidase activity
SAHV_RS08125	COG0095	Lipoate-protein ligase
SAHV_RS08130	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SAHV_RS08175	COG4537	Required for transformation and DNA binding
SAHV_RS08180	COG1459	type II secretion system
SAHV_RS08185	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SAHV_RS08190	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SAHV_RS08195	COG0011	TIGRFAM Protein of
SAHV_RS08200	COG1940	carbohydrate kinase activity
SAHV_RS08205	COG4483	Protein conserved in bacteria
SAHV_RS08215	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
SAHV_RS08225	COG0768	penicillin binding
SAHV_RS08240	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SAHV_RS08245	COG1121	(ABC) transporter
SAHV_RS08255	COG0513	Belongs to the DEAD box helicase family
SAHV_RS08265	COG2384	SAM-dependent methyltransferase
SAHV_RS08285	COG0517	IMP dehydrogenase activity
SAHV_RS08305	COG0295	cytidine deaminase activity
SAHV_RS08320	COG1702	phosphate starvation-inducible protein PhoH
SAHV_RS08335	COG1030	water channel activity
SAHV_RS08345	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
SAHV_RS08350	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SAHV_RS08380	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SAHV_RS08400	COG1466	dna polymerase III delta subunit
SAHV_RS08405	COG0658	competence protein
SAHV_RS08405	COG2333	competence protein COMEC
SAHV_RS08410	COG2131	deaminase
SAHV_RS08415	COG2183	response to ionizing radiation
SAHV_RS08420	COG2226	methyltransferase
SAHV_RS08425	COG0799	negative regulation of ribosome biogenesis
SAHV_RS08430	COG1713	HD superfamily hydrolase involved in NAD metabolism
SAHV_RS08440	COG1534	Rna-binding protein
SAHV_RS08450	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SAHV_RS08455	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
SAHV_RS08485	COG3177	Filamentation induced by cAMP protein fic
SAHV_RS08490	COG1914	H( )-stimulated, divalent metal cation uptake system
SAHV_RS08500	COG0439	Biotin carboxylase
SAHV_RS08505	COG0511	ligase activity, forming carbon-carbon bonds
SAHV_RS08510	COG1984	allophanate hydrolase subunit 2
SAHV_RS08515	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
SAHV_RS08530	COG0826	peptidase U32
SAHV_RS08535	COG0826	peptidase U32
SAHV_RS08565	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SAHV_RS08580	COG1104	cysteine desulfurase activity
SAHV_RS08585	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SAHV_RS08595	COG3237	CsbD-like
SAHV_RS08600	COG1959	2 iron, 2 sulfur cluster binding
SAHV_RS08605	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SAHV_RS08610	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
SAHV_RS08650	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
SAHV_RS08650	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SAHV_RS08655	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SAHV_RS08655	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SAHV_RS08660	COG1862	Preprotein translocase
SAHV_RS08700	COG2868	ribosomal protein
SAHV_RS08735	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
SAHV_RS08770	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
SAHV_RS08780	COG0285	dihydrofolate synthase activity
SAHV_RS08790	COG2818	Glycosylase
SAHV_RS08825	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SAHV_RS08860	COG4112	unkown
SAHV_RS08885	COG0833	amino acid
SAHV_RS08900	COG1484	DNA-dependent DNA replication
SAHV_RS08930	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SAHV_RS08930	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SAHV_RS08940	COG5002	protein histidine kinase activity
SAHV_RS08945	COG0745	RESPONSE REGULATOR receiver
SAHV_RS08960	COG0372	Belongs to the citrate synthase family
SAHV_RS08965	COG1113	amino acid transport
SAHV_RS08995	COG0281	malic enzyme
SAHV_RS09005	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
SAHV_RS09010	COG4109	DRTGG domain
SAHV_RS09050	COG0827	DNA restriction-modification system
SAHV_RS09060	COG0730	response to heat
SAHV_RS09070	COG1104	cysteine desulfurase activity
SAHV_RS09085	COG1956	GAF domain-containing protein
SAHV_RS09105	COG0584	glycerophosphoryl diester phosphodiesterase
SAHV_RS09110	COG1764	response to oxidative stress
SAHV_RS09115	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
SAHV_RS09120	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SAHV_RS09135	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAHV_RS09135	COG1263	PTS System
SAHV_RS09140	COG0204	Acyl-transferase
SAHV_RS09145	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SAHV_RS09180	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SAHV_RS09185	COG0454	-acetyltransferase
SAHV_RS09205	COG1605	Chorismate mutase
SAHV_RS09205	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
SAHV_RS09230	COG1674	ftsk spoiiie
SAHV_RS09235	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SAHV_RS09245	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SAHV_RS09250	COG1363	Peptidase, m42
SAHV_RS09260	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SAHV_RS09270	COG0510	thiamine kinase activity
SAHV_RS09290	COG1187	pseudouridine synthase activity
SAHV_RS09295	COG2244	polysaccharide biosynthetic process
SAHV_RS09325	COG2814	Major facilitator Superfamily
SAHV_RS09330	COG1242	4 iron, 4 sulfur cluster binding
SAHV_RS09335	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
SAHV_RS09345	COG2267	carboxylic ester hydrolase activity
SAHV_RS09375	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SAHV_RS09375	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SAHV_RS09395	COG3266	domain, Protein
SAHV_RS09395	COG4193	domain, Protein
SAHV_RS09395	COG5632	N-Acetylmuramoyl-L-alanine amidase
SAHV_RS09425	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SAHV_RS09465	COG0656	L-ascorbic acid biosynthetic process
SAHV_RS09485	COG1506	peptidase
SAHV_RS09490	COG2816	NAD+ diphosphatase activity
SAHV_RS09745	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
SAHV_RS09775	COG1131	(ABC) transporter
SAHV_RS09780	COG0537	adenosine 5'-monophosphoramidase activity
SAHV_RS09810	COG0420	3'-5' exonuclease activity
SAHV_RS09835	COG2197	response regulator
SAHV_RS09840	COG4585	Histidine kinase
SAHV_RS09840	COG2203	Gaf domain
SAHV_RS09845	COG0564	pseudouridine synthase activity
SAHV_RS09875	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SAHV_RS09880	COG1126	abc transporter atp-binding protein
SAHV_RS09885	COG0765	amino acid transport
SAHV_RS10055	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SAHV_RS10060	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
SAHV_RS10070	COG4129	membrane
SAHV_RS10095	COG1988	membrane-bound metal-dependent
SAHV_RS10110	COG1134	teichoic acid transport
SAHV_RS10110	COG1388	LysM domain
SAHV_RS10140	COG0535	radical SAM domain protein
SAHV_RS10145	COG1607	acyl-coa hydrolase
SAHV_RS10150	COG2309	aminopeptidase activity
SAHV_RS10170	COG1295	ribonuclease BN
SAHV_RS10290	COG4851	CamS sex pheromone cAM373 precursor
SAHV_RS10310	COG4496	protein, YerC YecD
SAHV_RS10345	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
SAHV_RS10355	COG0077	Prephenate dehydratase
SAHV_RS10365	COG0471	metal ion transport
SAHV_RS10375	COG1335	isochorismatase
SAHV_RS10390	COG1012	belongs to the aldehyde dehydrogenase family
SAHV_RS10440	COG1131	(ABC) transporter
SAHV_RS10455	COG1725	Transcriptional regulator
SAHV_RS10510	COG0860	N-Acetylmuramoyl-L-alanine amidase
SAHV_RS10510	COG1388	LysM domain
SAHV_RS10520	COG1388	LysM domain
SAHV_RS10520	COG5632	N-Acetylmuramoyl-L-alanine amidase
SAHV_RS10570	COG0739	heme binding
SAHV_RS10620	COG0740	serine-type endopeptidase activity
SAHV_RS10790	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
SAHV_RS10835	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SAHV_RS10860	COG3728	DNA packaging
SAHV_RS10860	COG5484	DNA packaging
SAHV_RS10940	COG0582	viral genome integration into host DNA
SAHV_RS11005	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SAHV_RS11010	COG1621	beta-fructofuranosidase activity
SAHV_RS11015	COG1609	Transcriptional regulator
SAHV_RS11020	COG0004	ammonium transporteR
SAHV_RS11025	COG0425	Belongs to the sulfur carrier protein TusA family
SAHV_RS11030	COG2391	methyltransferase activity
SAHV_RS11040	COG0488	(ABC) transporter
SAHV_RS11050	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
SAHV_RS11060	COG0456	acetyltransferase
SAHV_RS11065	COG1214	PFAM Peptidase M22, glycoprotease
SAHV_RS11070	COG0802	atpase or kinase
SAHV_RS11085	COG0028	Belongs to the TPP enzyme family
SAHV_RS11155	COG2183	response to ionizing radiation
SAHV_RS11160	COG1191	sigma factor activity
SAHV_RS11170	COG1366	Belongs to the anti-sigma-factor antagonist family
SAHV_RS11175	COG2208	phosphoserine phosphatase activity
SAHV_RS11210	COG3428	Bacterial PH domain
SAHV_RS11240	COG2205	protein histidine kinase activity
SAHV_RS11245	COG0745	RESPONSE REGULATOR receiver
SAHV_RS11260	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SAHV_RS11270	COG0772	Belongs to the SEDS family
SAHV_RS11285	COG1937	Protein conserved in bacteria
SAHV_RS11295	COG1418	mRNA catabolic process
SAHV_RS11340	COG0629	single-stranded DNA binding
SAHV_RS11415	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
SAHV_RS11440	COG0009	L-threonylcarbamoyladenylate synthase
SAHV_RS11445	COG2890	protein-(glutamine-N5) methyltransferase activity
SAHV_RS11465	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
SAHV_RS11505	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SAHV_RS11555	COG0813	purine-nucleoside phosphorylase activity
SAHV_RS11560	COG0783	Belongs to the Dps family
SAHV_RS11580	COG1482	cell wall glycoprotein biosynthetic process
SAHV_RS11585	COG0702	epimerase
SAHV_RS11590	COG0640	Transcriptional regulator
SAHV_RS11610	COG0561	phosphatase activity
SAHV_RS11615	COG1119	ATPase activity
SAHV_RS11630	COG3711	transcriptional antiterminator
SAHV_RS11660	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
SAHV_RS11720	COG0489	protein tyrosine kinase activity
SAHV_RS11725	COG2814	Major facilitator Superfamily
SAHV_RS11740	COG1272	protein, Hemolysin III
SAHV_RS11750	COG1988	membrane-bound metal-dependent
SAHV_RS11760	COG3314	Sporulation integral membrane protein YlbJ
SAHV_RS11765	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAHV_RS11770	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAHV_RS11775	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
SAHV_RS11785	COG3457	Alanine racemase
SAHV_RS11790	COG4264	IucA IucC family
SAHV_RS11795	COG2814	Major facilitator Superfamily
SAHV_RS11820	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SAHV_RS11830	COG2130	NADP-dependent
SAHV_RS11895	COG0656	L-ascorbic acid biosynthetic process
SAHV_RS11900	COG0789	Transcriptional regulator
SAHV_RS11910	COG5492	domain, Protein
SAHV_RS11930	COG3527	Alpha-acetolactate decarboxylase
SAHV_RS11935	COG0028	Belongs to the TPP enzyme family
SAHV_RS12040	COG0201	protein transport
SAHV_RS12155	COG2252	PERMEase
SAHV_RS12200	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SAHV_RS12265	COG1763	Mo-molybdopterin cofactor biosynthetic process
SAHV_RS12285	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SAHV_RS12290	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
SAHV_RS12295	COG4149	molybdate abc transporter
SAHV_RS12300	COG0725	ABC transporter, periplasmic molybdate-binding protein
SAHV_RS12315	COG1268	BioY protein
SAHV_RS12330	COG1960	acyl-CoA dehydrogenase activity
SAHV_RS12335	COG4413	Urea transporter
SAHV_RS12400	COG3942	CHAP domain
SAHV_RS12410	COG1757	Na H antiporter
SAHV_RS12425	COG3942	CHAP domain
SAHV_RS12495	COG1113	amino acid transport
SAHV_RS12515	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SAHV_RS12520	COG0385	Bile acid
SAHV_RS12530	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAHV_RS12530	COG1263	PTS System
SAHV_RS12535	COG1737	Transcriptional regulator
SAHV_RS12555	COG1028	Short-chain dehydrogenase reductase Sdr
SAHV_RS12560	COG1473	amidohydrolase
SAHV_RS12575	COG0583	DNA-binding transcription factor activity
SAHV_RS12600	COG2258	MOSC domain
SAHV_RS12620	COG1668	transmembrane transport
SAHV_RS12625	COG4152	abc transporter atp-binding protein
SAHV_RS12630	COG3152	Membrane
SAHV_RS12640	COG0786	glutamate:sodium symporter activity
SAHV_RS12650	COG0598	Magnesium transport protein CorA
SAHV_RS12665	COG0657	acetylesterase activity
SAHV_RS12675	COG2814	Major facilitator Superfamily
SAHV_RS12680	COG1566	PFAM secretion protein HlyD family protein
SAHV_RS12690	COG2814	Major facilitator Superfamily
SAHV_RS12755	COG1620	l-lactate permease
SAHV_RS12775	COG0604	alcohol dehydrogenase
SAHV_RS12805	COG1511	domain protein
SAHV_RS12820	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAHV_RS12820	COG1263	PTS System
SAHV_RS12840	COG3871	stress protein (general stress protein 26)
SAHV_RS12880	COG0789	Transcriptional regulator
SAHV_RS12900	COG2181	nitrate reductase activity
SAHV_RS12910	COG1140	nitrate reductase beta subunit
SAHV_RS12915	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
SAHV_RS12925	COG2146	nitrite reductase [NAD(P)H] activity
SAHV_RS12930	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
SAHV_RS12940	COG0454	-acetyltransferase
SAHV_RS12945	COG2116	formate transmembrane transporter activity
SAHV_RS12960	COG0803	Belongs to the bacterial solute-binding protein 9 family
SAHV_RS12960	COG3443	Belongs to the bacterial solute-binding protein 9 family
SAHV_RS12995	COG1126	abc transporter atp-binding protein
SAHV_RS13000	COG0765	amino acid transport
SAHV_RS13005	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SAHV_RS13010	COG2814	Major facilitator Superfamily
SAHV_RS13030	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
SAHV_RS13075	COG0156	8-amino-7-oxononanoate synthase activity
SAHV_RS13085	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
SAHV_RS13090	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
SAHV_RS13105	COG1132	(ABC) transporter
SAHV_RS13110	COG1132	(ABC) transporter
SAHV_RS13110	COG2375	cellular response to nickel ion
SAHV_RS13130	COG1929	Belongs to the glycerate kinase type-1 family
SAHV_RS13140	COG2814	Major facilitator Superfamily
SAHV_RS13160	COG1113	amino acid transport
SAHV_RS13175	COG0531	amino acid
SAHV_RS13200	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
SAHV_RS13210	COG1174	glycine betaine transport
SAHV_RS13220	COG1174	glycine betaine transport
SAHV_RS13240	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
SAHV_RS13245	COG0531	amino acid
SAHV_RS13250	COG2272	Belongs to the type-B carboxylesterase lipase family
SAHV_RS13255	COG2814	Major facilitator Superfamily
SAHV_RS13260	COG0390	transport system, permease component
SAHV_RS13265	COG4619	ABC transporter
SAHV_RS13270	COG1363	Peptidase, m42
SAHV_RS13290	COG4808	Protein conserved in bacteria
SAHV_RS13295	COG0069	glutamate synthase activity
SAHV_RS13350	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
SAHV_RS13355	COG1028	Short-chain dehydrogenase reductase Sdr
SAHV_RS13360	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
SAHV_RS13365	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
SAHV_RS13450	COG0494	nUDIX hydrolase
SAHV_RS13490	COG1846	Transcriptional regulator
SAHV_RS13530	COG1070	Carbohydrate kinase
SAHV_RS13535	COG1802	Transcriptional regulator
SAHV_RS13540	COG0789	Transcriptional regulator
SAHV_RS13545	COG2357	RelA SpoT domain protein
SAHV_RS13550	COG4876	unkown
SAHV_RS13560	COG2271	Major facilitator Superfamily
SAHV_RS13565	COG0586	Pfam SNARE associated Golgi protein
SAHV_RS13575	COG1131	(ABC) transporter
SAHV_RS13595	COG3949	Membrane
SAHV_RS13600	COG0400	carboxylic ester hydrolase activity
SAHV_RS13605	COG0346	lactoylglutathione lyase activity
SAHV_RS13610	COG1846	Transcriptional regulator
SAHV_RS13620	COG2514	catechol 2,3-dioxygenase activity
SAHV_RS13635	COG0561	phosphatase activity
SAHV_RS13640	COG1131	(ABC) transporter
SAHV_RS13650	COG3764	Sortase (surface protein transpeptidase)
SAHV_RS13670	COG1760	l-serine dehydratase
SAHV_RS13675	COG1760	l-serine dehydratase
SAHV_RS13690	COG0697	spore germination
SAHV_RS13695	COG0657	acetylesterase activity
SAHV_RS13715	COG0028	Belongs to the TPP enzyme family
SAHV_RS13730	COG0583	DNA-binding transcription factor activity
SAHV_RS13740	COG3942	CHAP domain
SAHV_RS13750	COG3425	synthase
SAHV_RS13755	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
SAHV_RS13780	COG2409	Drug exporters of the RND superfamily
SAHV_RS13825	COG0436	Aminotransferase
SAHV_RS13855	COG3942	CHAP domain
SAHV_RS13860	COG2755	lipolytic protein G-D-S-L family
SAHV_RS13860	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
SAHV_RS13970	COG3001	Fructosamine kinase
SAHV_RS13975	COG0167	dihydroorotate dehydrogenase activity
SAHV_RS14035	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
SAHV_RS14040	COG3527	Alpha-acetolactate decarboxylase
SAHV_RS14055	COG0531	amino acid
SAHV_RS14085	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SAHV_RS14105	COG1012	belongs to the aldehyde dehydrogenase family
SAHV_RS14115	COG1510	regulation of RNA biosynthetic process
SAHV_RS14120	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SAHV_RS14145	COG2851	Citrate transporter
SAHV_RS14160	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
SAHV_RS14170	COG0386	Belongs to the glutathione peroxidase family
SAHV_RS14195	COG1136	(ABC) transporter
SAHV_RS14200	COG2205	protein histidine kinase activity
SAHV_RS14205	COG0745	RESPONSE REGULATOR receiver
SAHV_RS14220	COG1785	Belongs to the alkaline phosphatase family
SAHV_RS14225	COG1846	Transcriptional regulator
SAHV_RS14270	COG1438	arginine binding
SAHV_RS14290	COG3711	transcriptional antiterminator
SAHV_RS14290	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SAHV_RS14295	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SAHV_RS14295	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SAHV_RS14295	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SAHV_RS14300	COG1482	cell wall glycoprotein biosynthetic process
SAHV_RS14310	COG1705	Flagellar rod assembly protein muramidase FlgJ
SAHV_RS14310	COG3942	CHAP domain
SAHV_RS14315	COG3433	isochorismatase activity
SAHV_RS14315	COG1535	isochorismatase
SAHV_RS14330	COG0438	transferase activity, transferring glycosyl groups
SAHV_RS14345	COG1073	alpha beta
SAHV_RS14365	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SAHV_RS14385	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SAHV_RS14475	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
SAHV_RS14565	COG2962	Rard protein
SAHV_RS14575	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
SAHV_RS14590	COG1136	(ABC) transporter
SAHV_RS14595	COG0577	efflux transmembrane transporter activity
SAHV_RS14605	COG1278	Cold shock
SAHV_RS14625	COG1475	DNA binding