locus-tag	class	description
SAOUHSC_00003	COG2501	S4 domain
SAOUHSC_00006	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SAOUHSC_00007	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
SAOUHSC_00013	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
SAOUHSC_00015	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
SAOUHSC_00017	COG0359	binds to the 23S rRNA
SAOUHSC_00018	COG0305	Participates in initiation and elongation during chromosome replication
SAOUHSC_00024	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
SAOUHSC_00025	COG0737	Belongs to the 5'-nucleotidase family
SAOUHSC_00033	COG0730	response to heat
SAOUHSC_00034	COG1937	Protein conserved in bacteria
SAOUHSC_00035	COG2210	Belongs to the sulfur carrier protein TusA family
SAOUHSC_00036	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SAOUHSC_00043	COG0655	NAD(P)H dehydrogenase (quinone) activity
SAOUHSC_00046	COG0583	DNA-binding transcription factor activity
SAOUHSC_00051	COG0823	Involved in the tonB-independent uptake of proteins
SAOUHSC_00057	COG1473	amidohydrolase
SAOUHSC_00060	COG1283	sodium-dependent phosphate transmembrane transporter activity
SAOUHSC_00061	COG4716	Myosin-crossreactive antigen
SAOUHSC_00062	COG0697	spore germination
SAOUHSC_00067	COG1620	l-lactate permease
SAOUHSC_00069	COG1388	LysM domain
SAOUHSC_00071	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAOUHSC_00072	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAOUHSC_00074	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SAOUHSC_00076	COG2423	ornithine cyclodeaminase activity
SAOUHSC_00077	COG4264	IucA IucC family
SAOUHSC_00078	COG2814	Major facilitator Superfamily
SAOUHSC_00079	COG4264	IucA IucC family
SAOUHSC_00080	COG4264	IucA IucC family
SAOUHSC_00082	COG0019	diaminopimelate decarboxylase activity
SAOUHSC_00083	COG1475	DNA binding
SAOUHSC_00088	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SAOUHSC_00089	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SAOUHSC_00090	COG0438	transferase activity, transferring glycosyl groups
SAOUHSC_00097	COG0813	purine-nucleoside phosphorylase activity
SAOUHSC_00099	COG2814	Major facilitator Superfamily
SAOUHSC_00103	COG3639	organic phosphonate transmembrane transporter activity
SAOUHSC_00107	COG0737	Belongs to the 5'-nucleotidase family
SAOUHSC_00113	COG1454	alcohol dehydrogenase
SAOUHSC_00113	COG1012	belongs to the aldehyde dehydrogenase family
SAOUHSC_00118	COG1086	Polysaccharide biosynthesis protein
SAOUHSC_00120	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
SAOUHSC_00126	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
SAOUHSC_00128	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
SAOUHSC_00129	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
SAOUHSC_00131	COG2832	Protein of unknown function (DUF454)
SAOUHSC_00138	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
SAOUHSC_00139	COG1960	acyl-CoA dehydrogenase activity
SAOUHSC_00141	COG5609	conserved protein (DUF2294)
SAOUHSC_00151	COG1114	Component of the transport system for branched-chain amino acids
SAOUHSC_00152	COG1335	isochorismatase
SAOUHSC_00153	COG3961	Belongs to the TPP enzyme family
SAOUHSC_00160	COG1737	Transcriptional regulator
SAOUHSC_00168	COG0601	transmembrane transport
SAOUHSC_00169	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SAOUHSC_00171	COG0405	Gamma-glutamyltransferase
SAOUHSC_00175	COG3842	ATPase activity
SAOUHSC_00177	COG1175	transmembrane transport
SAOUHSC_00178	COG3833	ABC-type maltose transport systems, permease component
SAOUHSC_00179	COG0673	inositol 2-dehydrogenase activity
SAOUHSC_00180	COG0673	inositol 2-dehydrogenase activity
SAOUHSC_00182	COG1755	Isoprenylcysteine carboxyl methyltransferase
SAOUHSC_00195	COG0183	Belongs to the thiolase family
SAOUHSC_00197	COG1960	acyl-CoA dehydrogenase activity
SAOUHSC_00198	COG0318	PFAM AMP-dependent synthetase and ligase
SAOUHSC_00201	COG0747	negative chemotaxis
SAOUHSC_00202	COG3189	MarR family transcriptional regulator
SAOUHSC_00209	COG2190	(PTS) system
SAOUHSC_00209	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAOUHSC_00209	COG1263	PTS System
SAOUHSC_00211	COG1957	nucleoside hydrolase
SAOUHSC_00215	COG3414	Phosphotransferase system galactitol-specific IIB component
SAOUHSC_00216	COG3775	system Galactitol-specific IIC component
SAOUHSC_00217	COG1063	alcohol dehydrogenase
SAOUHSC_00219	COG1063	alcohol dehydrogenase
SAOUHSC_00221	COG1063	alcohol dehydrogenase
SAOUHSC_00222	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
SAOUHSC_00223	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
SAOUHSC_00226	COG1063	alcohol dehydrogenase
SAOUHSC_00227	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
SAOUHSC_00234	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SAOUHSC_00235	COG1263	PTS System
SAOUHSC_00235	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAOUHSC_00235	COG2190	(PTS) system
SAOUHSC_00236	COG2723	6-phospho-beta-galactosidase activity
SAOUHSC_00237	COG2226	methyltransferase
SAOUHSC_00249	COG1131	(ABC) transporter
SAOUHSC_00256	COG3942	CHAP domain
SAOUHSC_00256	COG1388	LysM domain
SAOUHSC_00282	COG1114	Component of the transport system for branched-chain amino acids
SAOUHSC_00284	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
SAOUHSC_00285	COG0577	efflux transmembrane transporter activity
SAOUHSC_00293	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SAOUHSC_00294	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
SAOUHSC_00299	COG3314	Sporulation integral membrane protein YlbJ
SAOUHSC_00304	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SAOUHSC_00309	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
SAOUHSC_00310	COG3037	sugar-specific permease SgaT UlaA
SAOUHSC_00312	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SAOUHSC_00313	COG3711	transcriptional antiterminator
SAOUHSC_00317	COG2271	Major facilitator Superfamily
SAOUHSC_00318	COG0346	lactoylglutathione lyase activity
SAOUHSC_00319	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SAOUHSC_00320	COG0431	NADPH-dependent FMN reductase
SAOUHSC_00324	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SAOUHSC_00325	COG2822	iron ion transport
SAOUHSC_00327	COG0672	)-iron permease
SAOUHSC_00328	COG0805	protein transport
SAOUHSC_00329	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
SAOUHSC_00331	COG1476	TRANSCRIPTIONal
SAOUHSC_00333	COG1131	(ABC) transporter
SAOUHSC_00339	COG0646	methionine synthase
SAOUHSC_00339	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
SAOUHSC_00340	COG0626	cystathionine gamma-synthase activity
SAOUHSC_00341	COG0626	cystathionine gamma-synthase activity
SAOUHSC_00342	COG1475	DNA binding
SAOUHSC_00344	COG0668	transmembrane transport
SAOUHSC_00345	COG4481	Protein conserved in bacteria
SAOUHSC_00346	COG0012	GTP binding
SAOUHSC_00352	COG4974	Belongs to the 'phage' integrase family
SAOUHSC_00364	COG3634	alkyl hydroperoxide reductase activity
SAOUHSC_00367	COG1823	symporter activity
SAOUHSC_00373	COG2233	PERMEase
SAOUHSC_00381	COG3759	membrane
SAOUHSC_00410	COG0523	cobalamin synthesis protein
SAOUHSC_00412	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
SAOUHSC_00414	COG5609	conserved protein (DUF2294)
SAOUHSC_00417	COG1647	Serine aminopeptidase, S33
SAOUHSC_00420	COG0733	neurotransmitter:sodium symporter activity
SAOUHSC_00421	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
SAOUHSC_00422	COG0626	cystathionine gamma-synthase activity
SAOUHSC_00424	COG2011	ABC-type metal ion transport system permease component
SAOUHSC_00426	COG1464	Belongs to the NlpA lipoprotein family
SAOUHSC_00434	COG0583	DNA-binding transcription factor activity
SAOUHSC_00435	COG0069	glutamate synthase activity
SAOUHSC_00435	COG0067	glutamate synthase
SAOUHSC_00435	COG0070	glutamate synthase
SAOUHSC_00436	COG0493	'glutamate synthase
SAOUHSC_00437	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAOUHSC_00437	COG1263	PTS System
SAOUHSC_00438	COG0366	Alpha amylase catalytic
SAOUHSC_00439	COG2188	Transcriptional regulator
SAOUHSC_00442	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
SAOUHSC_00450	COG1982	Orn Lys Arg decarboxylase major
SAOUHSC_00452	COG3870	Protein conserved in bacteria
SAOUHSC_00454	COG0470	DNA polymerase III
SAOUHSC_00455	COG1774	PSP1 C-terminal conserved region
SAOUHSC_00457	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
SAOUHSC_00459	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
SAOUHSC_00462	COG0084	hydrolase, TatD family'
SAOUHSC_00463	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
SAOUHSC_00465	COG4466	Protein conserved in bacteria
SAOUHSC_00467	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
SAOUHSC_00468	COG0251	oxidation-reduction process
SAOUHSC_00471	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
SAOUHSC_00479	COG2244	polysaccharide biosynthetic process
SAOUHSC_00480	COG3956	TIGRFAM MazG family protein
SAOUHSC_00481	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
SAOUHSC_00483	COG1098	S1 RNA binding domain
SAOUHSC_00486	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
SAOUHSC_00491	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
SAOUHSC_00497	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
SAOUHSC_00501	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SAOUHSC_00503	COG3880	PFAM UvrB UvrC protein
SAOUHSC_00507	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
SAOUHSC_00508	COG4956	integral membrane protein (PIN domain superfamily)
SAOUHSC_00512	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
SAOUHSC_00523	COG2813	Specifically methylates the guanine in position
SAOUHSC_00531	COG1473	amidohydrolase
SAOUHSC_00538	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
SAOUHSC_00539	COG1428	Deoxynucleoside kinase
SAOUHSC_00540	COG1428	Deoxynucleoside kinase
SAOUHSC_00542	COG0561	phosphatase activity
SAOUHSC_00545	COG4932	domain protein
SAOUHSC_00550	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
SAOUHSC_00553	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
SAOUHSC_00575	COG0095	Lipoate-protein ligase
SAOUHSC_00577	COG0083	homoserine kinase activity
SAOUHSC_00581	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SAOUHSC_00603	COG0667	Aldo Keto reductase
SAOUHSC_00604	COG0655	NAD(P)H dehydrogenase (quinone) activity
SAOUHSC_00606	COG1078	dGTPase activity
SAOUHSC_00613	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SAOUHSC_00614	COG4139	cobalamin transport
SAOUHSC_00624	COG4974	Belongs to the 'phage' integrase family
SAOUHSC_00634	COG0803	Belongs to the bacterial solute-binding protein 9 family
SAOUHSC_00636	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SAOUHSC_00637	COG1121	(ABC) transporter
SAOUHSC_00638	COG1321	iron dependent repressor
SAOUHSC_00640	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
SAOUHSC_00642	COG1682	transport, permease protein
SAOUHSC_00643	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
SAOUHSC_00644	COG1216	Glycosyl transferase, family 2
SAOUHSC_00645	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
SAOUHSC_00646	COG1686	Belongs to the peptidase S11 family
SAOUHSC_00647	COG1132	(ABC) transporter
SAOUHSC_00648	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
SAOUHSC_00651	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
SAOUHSC_00652	COG1120	ATPase activity
SAOUHSC_00653	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAOUHSC_00654	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAOUHSC_00655	COG2376	Dihydroxyacetone kinase
SAOUHSC_00658	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
SAOUHSC_00660	COG3949	Membrane
SAOUHSC_00664	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
SAOUHSC_00667	COG1136	(ABC) transporter
SAOUHSC_00668	COG0577	efflux transmembrane transporter activity
SAOUHSC_00669	COG1392	Phosphate transport regulator
SAOUHSC_00670	COG0306	phosphate transporter
SAOUHSC_00671	COG3942	CHAP domain
SAOUHSC_00671	COG1388	LysM domain
SAOUHSC_00673	COG1917	Cupin 2, conserved barrel domain protein
SAOUHSC_00673	COG4977	sequence-specific DNA binding
SAOUHSC_00679	COG0583	DNA-binding transcription factor activity
SAOUHSC_00681	COG2814	Major facilitator Superfamily
SAOUHSC_00682	COG2839	Protein conserved in bacteria
SAOUHSC_00688	COG1611	Belongs to the LOG family
SAOUHSC_00692	COG4988	ABC transporter
SAOUHSC_00693	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
SAOUHSC_00695	COG0523	cobalamin synthesis protein
SAOUHSC_00696	COG4989	oxidoreductase activity
SAOUHSC_00698	COG0471	metal ion transport
SAOUHSC_00699	COG0415	Belongs to the DNA photolyase family
SAOUHSC_00705	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
SAOUHSC_00706	COG1349	DNA-binding transcription factor activity
SAOUHSC_00707	COG1105	Belongs to the carbohydrate kinase PfkB family
SAOUHSC_00708	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SAOUHSC_00708	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SAOUHSC_00708	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SAOUHSC_00710	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
SAOUHSC_00711	COG1253	flavin adenine dinucleotide binding
SAOUHSC_00712	COG0656	L-ascorbic acid biosynthetic process
SAOUHSC_00713	COG0463	Glycosyl transferase, family 2
SAOUHSC_00720	COG0720	synthase
SAOUHSC_00722	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
SAOUHSC_00722	COG0512	Glutamine amidotransferase of anthranilate synthase
SAOUHSC_00723	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SAOUHSC_00729	COG0488	(ABC) transporter
SAOUHSC_00730	COG0514	ATP-dependent DNA helicase (RecQ)
SAOUHSC_00731	COG0517	IMP dehydrogenase activity
SAOUHSC_00731	COG1125	glycine betaine transport
SAOUHSC_00732	COG1174	glycine betaine transport
SAOUHSC_00738	COG3104	oligopeptide transport
SAOUHSC_00742	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SAOUHSC_00743	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
SAOUHSC_00746	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAOUHSC_00747	COG4605	iron ion homeostasis
SAOUHSC_00748	COG4604	ABC transporter, ATP-binding protein
SAOUHSC_00749	COG4607	ABC-type enterochelin transport system periplasmic component
SAOUHSC_00762	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
SAOUHSC_00763	COG1739	Uncharacterized protein family UPF0029
SAOUHSC_00765	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
SAOUHSC_00766	COG1040	competence protein
SAOUHSC_00773	COG3942	CHAP domain
SAOUHSC_00773	COG1388	LysM domain
SAOUHSC_00788	COG0391	Required for morphogenesis under gluconeogenic growth conditions
SAOUHSC_00797	COG0149	triose-phosphate isomerase activity
SAOUHSC_00801	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
SAOUHSC_00802	COG1647	Serine aminopeptidase, S33
SAOUHSC_00803	COG0557	exoribonuclease II activity
SAOUHSC_00812	COG3266	domain, Protein
SAOUHSC_00812	COG2931	calcium- and calmodulin-responsive adenylate cyclase activity
SAOUHSC_00819	COG1278	Cold shock
SAOUHSC_00827	COG0406	alpha-ribazole phosphatase activity
SAOUHSC_00828	COG1279	arginine transmembrane transporter activity
SAOUHSC_00834	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SAOUHSC_00835	COG1393	Belongs to the ArsC family
SAOUHSC_00838	COG3878	Protein conserved in bacteria
SAOUHSC_00840	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
SAOUHSC_00843	COG2011	ABC-type metal ion transport system permease component
SAOUHSC_00844	COG1464	Belongs to the NlpA lipoprotein family
SAOUHSC_00847	COG0396	ATPase activity
SAOUHSC_00848	COG0719	Fe-S assembly protein
SAOUHSC_00850	COG0822	iron-sulfur transferase activity
SAOUHSC_00854	COG1253	flavin adenine dinucleotide binding
SAOUHSC_00858	COG1801	Protein of unknown function DUF72
SAOUHSC_00859	COG0730	response to heat
SAOUHSC_00862	COG4470	Protein conserved in bacteria
SAOUHSC_00864	COG2445	Protein of unknown function DUF86
SAOUHSC_00870	COG1696	Membrane protein involved in D-alanine export
SAOUHSC_00872	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
SAOUHSC_00873	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
SAOUHSC_00874	COG4837	Protein of unknown function (DUF1462)
SAOUHSC_00875	COG1252	NADH dehydrogenase
SAOUHSC_00877	COG0316	Belongs to the HesB IscA family
SAOUHSC_00879	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
SAOUHSC_00880	COG2056	Na+-H+ antiporter family
SAOUHSC_00881	COG2050	protein possibly involved in aromatic compounds catabolism
SAOUHSC_00892	COG1098	S1 RNA binding domain
SAOUHSC_00893	COG1902	pentaerythritol trinitrate reductase activity
SAOUHSC_00897	COG0584	glycerophosphoryl diester phosphodiesterase
SAOUHSC_00900	COG0166	Belongs to the GPI family
SAOUHSC_00901	COG0398	Pfam SNARE associated Golgi protein
SAOUHSC_00909	COG0561	phosphatase activity
SAOUHSC_00914	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
SAOUHSC_00917	COG1881	PFAM PEBP family protein
SAOUHSC_00923	COG0601	transmembrane transport
SAOUHSC_00924	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SAOUHSC_00925	COG0444	Belongs to the ABC transporter superfamily
SAOUHSC_00926	COG4608	Belongs to the ABC transporter superfamily
SAOUHSC_00927	COG4166	transmembrane transport
SAOUHSC_00928	COG0747	negative chemotaxis
SAOUHSC_00929	COG0444	Belongs to the ABC transporter superfamily
SAOUHSC_00930	COG4608	Belongs to the ABC transporter superfamily
SAOUHSC_00931	COG0601	transmembrane transport
SAOUHSC_00932	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SAOUHSC_00937	COG1164	Oligoendopeptidase f
SAOUHSC_00939	COG2346	COG2346, Truncated hemoglobins
SAOUHSC_00942	COG2357	RelA SpoT domain protein
SAOUHSC_00944	COG0564	pseudouridine synthase activity
SAOUHSC_00945	COG2239	Acts as a magnesium transporter
SAOUHSC_00946	COG0569	domain protein
SAOUHSC_00946	COG0475	glutathione-regulated potassium exporter activity
SAOUHSC_00947	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
SAOUHSC_00948	COG0628	permease
SAOUHSC_00949	COG1115	amino acid carrier protein
SAOUHSC_00957	COG0861	Integral membrane protein TerC family
SAOUHSC_00958	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SAOUHSC_00959	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SAOUHSC_00960	COG0737	Belongs to the 5'-nucleotidase family
SAOUHSC_00961	COG4903	ComK protein
SAOUHSC_00964	COG4873	Protein conserved in bacteria
SAOUHSC_00976	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
SAOUHSC_00978	COG2314	TM2 domain
SAOUHSC_00979	COG0456	acetyltransferase
SAOUHSC_00980	COG1575	Belongs to the MenA family. Type 1 subfamily
SAOUHSC_00982	COG1169	isochorismate synthase
SAOUHSC_00984	COG2267	carboxylic ester hydrolase activity
SAOUHSC_00989	COG0436	Aminotransferase
SAOUHSC_00991	COG3594	Acyltransferase
SAOUHSC_00994	COG5632	N-Acetylmuramoyl-L-alanine amidase
SAOUHSC_00994	COG4193	domain, Protein
SAOUHSC_00994	COG3266	domain, Protein
SAOUHSC_00997	COG1316	TRANSCRIPTIONal
SAOUHSC_00998	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SAOUHSC_01008	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
SAOUHSC_01011	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
SAOUHSC_01017	COG0138	bifunctional purine biosynthesis protein purh
SAOUHSC_01019	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
SAOUHSC_01021	COG4172	Belongs to the ABC transporter superfamily
SAOUHSC_01022	COG4721	ABC-type cobalt transport system, permease component
SAOUHSC_01026	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
SAOUHSC_01031	COG1271	oxidase subunit
SAOUHSC_01032	COG1294	oxidase, subunit
SAOUHSC_01034	COG0569	domain protein
SAOUHSC_01047	COG1176	ABC-type spermidine putrescine transport system, permease component I
SAOUHSC_01048	COG1177	transmembrane transport
SAOUHSC_01049	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
SAOUHSC_01055	COG0483	inositol monophosphate 1-phosphatase activity
SAOUHSC_01058	COG1217	gtp-binding protein TYPA
SAOUHSC_01061	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
SAOUHSC_01063	COG0772	Belongs to the SEDS family
SAOUHSC_01070	COG3679	Belongs to the UPF0342 family
SAOUHSC_01074	COG0742	ribosomal rna small subunit methyltransferase
SAOUHSC_01086	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAOUHSC_01088	COG4509	Sortase family
SAOUHSC_01091	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
SAOUHSC_01096	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
SAOUHSC_01098	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
SAOUHSC_01098	COG1796	DNA polymerase
SAOUHSC_01103	COG2009	succinate dehydrogenase
SAOUHSC_01104	COG1053	succinate dehydrogenase
SAOUHSC_01105	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
SAOUHSC_01130	COG1288	antiporter activity
SAOUHSC_01137	COG1011	Hydrolase
SAOUHSC_01144	COG4839	cell division protein FtsL
SAOUHSC_01145	COG0768	penicillin binding
SAOUHSC_01148	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
SAOUHSC_01149	COG0849	cell division
SAOUHSC_01153	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
SAOUHSC_01155	COG0762	integral membrane protein
SAOUHSC_01156	COG2302	S4 RNA-binding domain
SAOUHSC_01158	COG3599	regulation of cell shape
SAOUHSC_01160	COG2514	catechol 2,3-dioxygenase activity
SAOUHSC_01163	COG0564	pseudouridine synthase activity
SAOUHSC_01165	COG2233	PERMEase
SAOUHSC_01175	COG1293	RNA-binding protein homologous to eukaryotic snRNP
SAOUHSC_01178	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
SAOUHSC_01179	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
SAOUHSC_01181	COG2314	TM2 domain
SAOUHSC_01184	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
SAOUHSC_01184	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
SAOUHSC_01186	COG0631	protein serine/threonine phosphatase activity
SAOUHSC_01189	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
SAOUHSC_01192	COG1302	Protein conserved in bacteria
SAOUHSC_01194	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
SAOUHSC_01204	COG1196	nuclear chromosome segregation
SAOUHSC_01205	COG0552	protein localization to endoplasmic reticulum
SAOUHSC_01207	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
SAOUHSC_01209	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
SAOUHSC_01221	COG0758	DNA mediated transformation
SAOUHSC_01243	COG0195	Participates in both transcription termination and antitermination
SAOUHSC_01244	COG2740	Nucleic-acid-binding protein implicated in transcription termination
SAOUHSC_01249	COG0196	riboflavin kinase activity
SAOUHSC_01254	COG2188	Transcriptional regulator
SAOUHSC_01255	COG0612	Peptidase, M16
SAOUHSC_01256	COG0612	Peptidase, M16
SAOUHSC_01257	COG0300	oxidoreductase activity
SAOUHSC_01261	COG1546	Belongs to the CinA family
SAOUHSC_01261	COG1058	Belongs to the CinA family
SAOUHSC_01265	COG1692	metallophosphoesterase
SAOUHSC_01266	COG0674	pyruvate-flavodoxin oxidoreductase activity
SAOUHSC_01266	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
SAOUHSC_01267	COG1013	pyruvate-flavodoxin oxidoreductase activity
SAOUHSC_01272	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
SAOUHSC_01274	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
SAOUHSC_01275	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
SAOUHSC_01281	COG1923	regulation of RNA biosynthetic process
SAOUHSC_01283	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
SAOUHSC_01284	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
SAOUHSC_01285	COG0789	Transcriptional regulator
SAOUHSC_01311	COG1131	(ABC) transporter
SAOUHSC_01314	COG2197	response regulator
SAOUHSC_01316	COG1525	nuclease
SAOUHSC_01319	COG0527	aspartate kinase activity
SAOUHSC_01320	COG0460	homoserine dehydrogenase
SAOUHSC_01321	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
SAOUHSC_01326	COG0833	amino acid
SAOUHSC_01332	COG2340	Cysteine-rich secretory protein family
SAOUHSC_01340	COG4846	Membrane protein involved in cytochrome C biogenesis
SAOUHSC_01346	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SAOUHSC_01348	COG0824	Thioesterase
SAOUHSC_01352	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
SAOUHSC_01354	COG1115	amino acid carrier protein
SAOUHSC_01358	COG0628	permease
SAOUHSC_01359	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
SAOUHSC_01359	COG0392	lysyltransferase activity
SAOUHSC_01363	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
SAOUHSC_01364	COG0287	Prephenate dehydrogenase
SAOUHSC_01365	COG1363	Peptidase, m42
SAOUHSC_01366	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
SAOUHSC_01367	COG0512	Glutamine amidotransferase of anthranilate synthase
SAOUHSC_01375	COG0561	phosphatase activity
SAOUHSC_01384	COG0704	Plays a role in the regulation of phosphate uptake
SAOUHSC_01386	COG0581	inorganic phosphate transmembrane transporter activity
SAOUHSC_01387	COG0573	inorganic phosphate transmembrane transporter activity
SAOUHSC_01392	COG0488	(ABC) transporter
SAOUHSC_01394	COG0527	aspartate kinase activity
SAOUHSC_01395	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
SAOUHSC_01412	COG4548	von Willebrand factor, type A
SAOUHSC_01413	COG0714	Associated with various cellular activities
SAOUHSC_01423	COG0671	phosphoesterase, PA-phosphatase related
SAOUHSC_01437	COG1413	lyase activity
SAOUHSC_01440	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
SAOUHSC_01450	COG0531	amino acid
SAOUHSC_01452	COG0686	Belongs to the AlaDH PNT family
SAOUHSC_01454	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SAOUHSC_01455	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
SAOUHSC_01460	COG0116	Belongs to the methyltransferase superfamily
SAOUHSC_01467	COG4499	WXG100 protein secretion system (Wss), protein YukC
SAOUHSC_01467	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
SAOUHSC_01469	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
SAOUHSC_01470	COG3935	DnaD domain protein
SAOUHSC_01475	COG0438	transferase activity, transferring glycosyl groups
SAOUHSC_01476	COG1694	Mazg nucleotide pyrophosphohydrolase
SAOUHSC_01477	COG2738	Putative neutral zinc metallopeptidase
SAOUHSC_01478	COG4347	Protein of unknown function (DUF1405)
SAOUHSC_01479	COG5582	Belongs to the UPF0302 family
SAOUHSC_01482	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
SAOUHSC_01486	COG0142	geranyltranstransferase activity
SAOUHSC_01499	COG0492	ferredoxin-NADP+ reductase activity
SAOUHSC_01502	COG0514	ATP-dependent DNA helicase (RecQ)
SAOUHSC_01504	COG1141	Ferredoxin
SAOUHSC_01515	COG1388	LysM domain
SAOUHSC_01515	COG0860	N-Acetylmuramoyl-L-alanine amidase
SAOUHSC_01525	COG5280	Phage tail tape measure protein TP901
SAOUHSC_01525	COG3953	SLT domain
SAOUHSC_01552	COG0756	dUTP diphosphatase activity
SAOUHSC_01575	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
SAOUHSC_01582	COG0582	viral genome integration into host DNA
SAOUHSC_01585	COG5002	protein histidine kinase activity
SAOUHSC_01586	COG0745	RESPONSE REGULATOR receiver
SAOUHSC_01587	COG1187	pseudouridine synthase activity
SAOUHSC_01592	COG0735	belongs to the Fur family
SAOUHSC_01593	COG0494	nUDIX hydrolase
SAOUHSC_01594	COG0667	Aldo Keto reductase
SAOUHSC_01596	COG4221	oxidoreductase activity
SAOUHSC_01599	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
SAOUHSC_01601	COG0366	Alpha amylase catalytic
SAOUHSC_01602	COG1609	Transcriptional regulator
SAOUHSC_01606	COG2195	Cleaves the N-terminal amino acid of tripeptides
SAOUHSC_01609	COG4129	membrane
SAOUHSC_01611	COG0508	dehydrogenase complex catalyzes the overall conversion of
SAOUHSC_01612	COG0022	dehydrogenase e1 component
SAOUHSC_01613	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
SAOUHSC_01614	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
SAOUHSC_01615	COG0497	DNA recombination
SAOUHSC_01622	COG1302	Protein conserved in bacteria
SAOUHSC_01623	COG0439	Biotin carboxylase
SAOUHSC_01624	COG0511	ligase activity, forming carbon-carbon bonds
SAOUHSC_01626	COG0006	proline dipeptidase activity
SAOUHSC_01629	COG0095	Lipoate-protein ligase
SAOUHSC_01630	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
SAOUHSC_01640	COG4537	Required for transformation and DNA binding
SAOUHSC_01641	COG1459	type II secretion system
SAOUHSC_01643	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
SAOUHSC_01644	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SAOUHSC_01645	COG0011	TIGRFAM Protein of
SAOUHSC_01646	COG1940	carbohydrate kinase activity
SAOUHSC_01647	COG4483	Protein conserved in bacteria
SAOUHSC_01650	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
SAOUHSC_01652	COG0768	penicillin binding
SAOUHSC_01656	COG1108	ABC-type Mn2 Zn2 transport systems permease components
SAOUHSC_01657	COG1121	(ABC) transporter
SAOUHSC_01659	COG0513	Belongs to the DEAD box helicase family
SAOUHSC_01661	COG2384	SAM-dependent methyltransferase
SAOUHSC_01665	COG0517	IMP dehydrogenase activity
SAOUHSC_01668	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
SAOUHSC_01670	COG0295	cytidine deaminase activity
SAOUHSC_01673	COG1702	phosphate starvation-inducible protein PhoH
SAOUHSC_01677	COG1030	water channel activity
SAOUHSC_01679	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
SAOUHSC_01680	COG1385	rRNA (uridine-N3-)-methyltransferase activity
SAOUHSC_01686	COG0635	Involved in the biosynthesis of porphyrin-containing compound
SAOUHSC_01690	COG1466	dna polymerase III delta subunit
SAOUHSC_01691	COG2333	competence protein COMEC
SAOUHSC_01691	COG0658	competence protein
SAOUHSC_01692	COG2131	deaminase
SAOUHSC_01694	COG2226	methyltransferase
SAOUHSC_01695	COG0799	negative regulation of ribosome biogenesis
SAOUHSC_01696	COG1713	HD superfamily hydrolase involved in NAD metabolism
SAOUHSC_01698	COG1534	Rna-binding protein
SAOUHSC_01700	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
SAOUHSC_01701	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
SAOUHSC_01706	COG3177	Filamentation induced by cAMP protein fic
SAOUHSC_01707	COG1914	H( )-stimulated, divalent metal cation uptake system
SAOUHSC_01709	COG0439	Biotin carboxylase
SAOUHSC_01710	COG0511	ligase activity, forming carbon-carbon bonds
SAOUHSC_01711	COG1984	allophanate hydrolase subunit 2
SAOUHSC_01712	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
SAOUHSC_01716	COG0826	peptidase U32
SAOUHSC_01717	COG0826	peptidase U32
SAOUHSC_01723	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
SAOUHSC_01727	COG1104	cysteine desulfurase activity
SAOUHSC_01728	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
SAOUHSC_01730	COG3237	CsbD-like
SAOUHSC_01734	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
SAOUHSC_01735	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
SAOUHSC_01737	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
SAOUHSC_01744	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
SAOUHSC_01744	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
SAOUHSC_01746	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SAOUHSC_01746	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
SAOUHSC_01747	COG1862	Preprotein translocase
SAOUHSC_01756	COG2868	ribosomal protein
SAOUHSC_01764	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
SAOUHSC_01766	COG0285	dihydrofolate synthase activity
SAOUHSC_01768	COG2818	Glycosylase
SAOUHSC_01775	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
SAOUHSC_01776	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
SAOUHSC_01782	COG4112	unkown
SAOUHSC_01786	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
SAOUHSC_01787	COG0833	amino acid
SAOUHSC_01788	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
SAOUHSC_01791	COG1484	DNA-dependent DNA replication
SAOUHSC_01797	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SAOUHSC_01797	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
SAOUHSC_01799	COG5002	protein histidine kinase activity
SAOUHSC_01800	COG0745	RESPONSE REGULATOR receiver
SAOUHSC_01802	COG0372	Belongs to the citrate synthase family
SAOUHSC_01803	COG1113	amino acid transport
SAOUHSC_01810	COG0281	malic enzyme
SAOUHSC_01811	COG0587	DNA-directed DNA polymerase activity
SAOUHSC_01812	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
SAOUHSC_01813	COG4109	DRTGG domain
SAOUHSC_01821	COG0827	DNA restriction-modification system
SAOUHSC_01825	COG1104	cysteine desulfurase activity
SAOUHSC_01827	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
SAOUHSC_01828	COG1956	GAF domain-containing protein
SAOUHSC_01830	COG0584	glycerophosphoryl diester phosphodiesterase
SAOUHSC_01831	COG1764	response to oxidative stress
SAOUHSC_01832	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
SAOUHSC_01833	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SAOUHSC_01836	COG1263	PTS System
SAOUHSC_01836	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAOUHSC_01837	COG0204	Acyl-transferase
SAOUHSC_01838	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
SAOUHSC_01843	COG5386	Cell surface protein
SAOUHSC_01845	COG2759	Belongs to the formate--tetrahydrofolate ligase family
SAOUHSC_01846	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SAOUHSC_01847	COG0454	-acetyltransferase
SAOUHSC_01852	COG1605	Chorismate mutase
SAOUHSC_01852	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
SAOUHSC_01857	COG1674	ftsk spoiiie
SAOUHSC_01858	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
SAOUHSC_01860	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
SAOUHSC_01861	COG1363	Peptidase, m42
SAOUHSC_01864	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
SAOUHSC_01866	COG0510	thiamine kinase activity
SAOUHSC_01870	COG1187	pseudouridine synthase activity
SAOUHSC_01871	COG2244	polysaccharide biosynthetic process
SAOUHSC_01872	COG2081	HI0933 family
SAOUHSC_01876	COG2814	Major facilitator Superfamily
SAOUHSC_01877	COG1242	4 iron, 4 sulfur cluster binding
SAOUHSC_01878	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
SAOUHSC_01882	COG2267	carboxylic ester hydrolase activity
SAOUHSC_01889	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SAOUHSC_01889	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
SAOUHSC_01895	COG4193	domain, Protein
SAOUHSC_01895	COG5632	N-Acetylmuramoyl-L-alanine amidase
SAOUHSC_01895	COG3266	domain, Protein
SAOUHSC_01897	COG1595	DNA-templated transcription, initiation
SAOUHSC_01901	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
SAOUHSC_01907	COG0656	L-ascorbic acid biosynthetic process
SAOUHSC_01912	COG1506	peptidase
SAOUHSC_01948	COG1131	(ABC) transporter
SAOUHSC_01960	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
SAOUHSC_01961	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
SAOUHSC_01967	COG1131	(ABC) transporter
SAOUHSC_01968	COG0537	adenosine 5'-monophosphoramidase activity
SAOUHSC_01975	COG0420	3'-5' exonuclease activity
SAOUHSC_01980	COG2197	response regulator
SAOUHSC_01981	COG2203	Gaf domain
SAOUHSC_01981	COG4585	Histidine kinase
SAOUHSC_01982	COG0564	pseudouridine synthase activity
SAOUHSC_01989	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
SAOUHSC_01990	COG1126	abc transporter atp-binding protein
SAOUHSC_01991	COG0765	amino acid transport
SAOUHSC_01998	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
SAOUHSC_01999	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
SAOUHSC_02001	COG4129	membrane
SAOUHSC_02006	COG1988	membrane-bound metal-dependent
SAOUHSC_02009	COG1388	LysM domain
SAOUHSC_02009	COG1134	teichoic acid transport
SAOUHSC_02019	COG5632	N-Acetylmuramoyl-L-alanine amidase
SAOUHSC_02019	COG1388	LysM domain
SAOUHSC_02049	COG1783	phage Terminase large subunit
SAOUHSC_02067	COG0305	Participates in initiation and elongation during chromosome replication
SAOUHSC_02089	COG4974	Belongs to the 'phage' integrase family
SAOUHSC_02090	COG0535	radical SAM domain protein
SAOUHSC_02091	COG1607	acyl-coa hydrolase
SAOUHSC_02092	COG2309	aminopeptidase activity
SAOUHSC_02097	COG1295	ribonuclease BN
SAOUHSC_02098	COG2197	response regulator
SAOUHSC_02121	COG4851	CamS sex pheromone cAM373 precursor
SAOUHSC_02123	COG0210	DNA helicase
SAOUHSC_02125	COG4496	protein, YerC YecD
SAOUHSC_02133	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
SAOUHSC_02135	COG0077	Prephenate dehydratase
SAOUHSC_02137	COG0471	metal ion transport
SAOUHSC_02139	COG1335	isochorismatase
SAOUHSC_02142	COG1012	belongs to the aldehyde dehydrogenase family
SAOUHSC_02152	COG1131	(ABC) transporter
SAOUHSC_02155	COG1725	Transcriptional regulator
SAOUHSC_02170	COG0860	N-Acetylmuramoyl-L-alanine amidase
SAOUHSC_02170	COG1388	LysM domain
SAOUHSC_02173	COG5632	N-Acetylmuramoyl-L-alanine amidase
SAOUHSC_02173	COG1388	LysM domain
SAOUHSC_02182	COG0739	heme binding
SAOUHSC_02194	COG4695	Portal protein
SAOUHSC_02216	COG1484	DNA-dependent DNA replication
SAOUHSC_02245	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
SAOUHSC_02246	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
SAOUHSC_02247	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
SAOUHSC_02250	COG3728	DNA packaging
SAOUHSC_02250	COG5484	DNA packaging
SAOUHSC_02254	COG0459	protein refolding
SAOUHSC_02267	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
SAOUHSC_02268	COG1621	beta-fructofuranosidase activity
SAOUHSC_02269	COG1609	Transcriptional regulator
SAOUHSC_02270	COG0004	ammonium transporteR
SAOUHSC_02271	COG0425	Belongs to the sulfur carrier protein TusA family
SAOUHSC_02272	COG2391	methyltransferase activity
SAOUHSC_02274	COG0488	(ABC) transporter
SAOUHSC_02276	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
SAOUHSC_02278	COG0456	acetyltransferase
SAOUHSC_02279	COG1214	PFAM Peptidase M22, glycoprotease
SAOUHSC_02280	COG0802	atpase or kinase
SAOUHSC_02282	COG0028	Belongs to the TPP enzyme family
SAOUHSC_02286	COG0473	3-isopropylmalate dehydrogenase activity
SAOUHSC_02297	COG2183	response to ionizing radiation
SAOUHSC_02298	COG1191	sigma factor activity
SAOUHSC_02300	COG1366	Belongs to the anti-sigma-factor antagonist family
SAOUHSC_02308	COG3428	Bacterial PH domain
SAOUHSC_02314	COG2205	protein histidine kinase activity
SAOUHSC_02315	COG0745	RESPONSE REGULATOR receiver
SAOUHSC_02317	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
SAOUHSC_02319	COG0772	Belongs to the SEDS family
SAOUHSC_02322	COG1937	Protein conserved in bacteria
SAOUHSC_02324	COG1418	mRNA catabolic process
SAOUHSC_02331	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
SAOUHSC_02334	COG0629	single-stranded DNA binding
SAOUHSC_02352	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
SAOUHSC_02357	COG0009	L-threonylcarbamoyladenylate synthase
SAOUHSC_02358	COG2890	protein-(glutamine-N5) methyltransferase activity
SAOUHSC_02362	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
SAOUHSC_02368	COG0504	CTP synthase activity
SAOUHSC_02370	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
SAOUHSC_02380	COG0813	purine-nucleoside phosphorylase activity
SAOUHSC_02381	COG0783	Belongs to the Dps family
SAOUHSC_02385	COG1482	cell wall glycoprotein biosynthetic process
SAOUHSC_02387	COG0702	epimerase
SAOUHSC_02388	COG0640	Transcriptional regulator
SAOUHSC_02396	COG0561	phosphatase activity
SAOUHSC_02397	COG1119	ATPase activity
SAOUHSC_02401	COG3711	transcriptional antiterminator
SAOUHSC_02403	COG0246	Mannitol dehydrogenase
SAOUHSC_02407	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
SAOUHSC_02418	COG2814	Major facilitator Superfamily
SAOUHSC_02422	COG1272	protein, Hemolysin III
SAOUHSC_02424	COG1988	membrane-bound metal-dependent
SAOUHSC_02426	COG3314	Sporulation integral membrane protein YlbJ
SAOUHSC_02427	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAOUHSC_02428	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
SAOUHSC_02430	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
SAOUHSC_02433	COG3457	Alanine racemase
SAOUHSC_02434	COG4264	IucA IucC family
SAOUHSC_02435	COG2814	Major facilitator Superfamily
SAOUHSC_02444	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SAOUHSC_02447	COG2130	NADP-dependent
SAOUHSC_02457	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
SAOUHSC_02460	COG0656	L-ascorbic acid biosynthetic process
SAOUHSC_02461	COG0789	Transcriptional regulator
SAOUHSC_02463	COG5492	domain, Protein
SAOUHSC_02467	COG3527	Alpha-acetolactate decarboxylase
SAOUHSC_02468	COG0028	Belongs to the TPP enzyme family
SAOUHSC_02472	COG0542	response to heat
SAOUHSC_02491	COG0201	protein transport
SAOUHSC_02516	COG2252	PERMEase
SAOUHSC_02517	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
SAOUHSC_02517	COG0551	DNA topoisomerase type I activity
SAOUHSC_02525	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
SAOUHSC_02541	COG1763	Mo-molybdopterin cofactor biosynthetic process
SAOUHSC_02545	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
SAOUHSC_02546	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
SAOUHSC_02547	COG4149	molybdate abc transporter
SAOUHSC_02549	COG0725	ABC transporter, periplasmic molybdate-binding protein
SAOUHSC_02552	COG1268	BioY protein
SAOUHSC_02557	COG4413	Urea transporter
SAOUHSC_02571	COG3942	CHAP domain
SAOUHSC_02573	COG1757	Na H antiporter
SAOUHSC_02576	COG3942	CHAP domain
SAOUHSC_02590	COG1113	amino acid transport
SAOUHSC_02594	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
SAOUHSC_02595	COG0385	Bile acid
SAOUHSC_02597	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAOUHSC_02597	COG1263	PTS System
SAOUHSC_02599	COG1737	Transcriptional regulator
SAOUHSC_02604	COG1028	Short-chain dehydrogenase reductase Sdr
SAOUHSC_02605	COG1473	amidohydrolase
SAOUHSC_02608	COG0583	DNA-binding transcription factor activity
SAOUHSC_02613	COG2258	MOSC domain
SAOUHSC_02618	COG1668	transmembrane transport
SAOUHSC_02619	COG4152	abc transporter atp-binding protein
SAOUHSC_02620	COG3152	Membrane
SAOUHSC_02622	COG0786	glutamate:sodium symporter activity
SAOUHSC_02624	COG0598	Magnesium transport protein CorA
SAOUHSC_02627	COG0657	acetylesterase activity
SAOUHSC_02629	COG2814	Major facilitator Superfamily
SAOUHSC_02630	COG1566	PFAM secretion protein HlyD family protein
SAOUHSC_02648	COG1620	l-lactate permease
SAOUHSC_02652	COG0604	alcohol dehydrogenase
SAOUHSC_02653	COG0456	acetyltransferase
SAOUHSC_02658	COG1511	domain protein
SAOUHSC_02661	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAOUHSC_02661	COG1263	PTS System
SAOUHSC_02662	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
SAOUHSC_02662	COG1263	PTS System
SAOUHSC_02665	COG3871	stress protein (general stress protein 26)
SAOUHSC_02674	COG0789	Transcriptional regulator
SAOUHSC_02678	COG2181	nitrate reductase activity
SAOUHSC_02680	COG1140	nitrate reductase beta subunit
SAOUHSC_02681	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
SAOUHSC_02683	COG2146	nitrite reductase [NAD(P)H] activity
SAOUHSC_02684	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
SAOUHSC_02686	COG0454	-acetyltransferase
SAOUHSC_02687	COG2116	formate transmembrane transporter activity
SAOUHSC_02690	COG3443	Belongs to the bacterial solute-binding protein 9 family
SAOUHSC_02690	COG0803	Belongs to the bacterial solute-binding protein 9 family
SAOUHSC_02697	COG1126	abc transporter atp-binding protein
SAOUHSC_02698	COG0765	amino acid transport
SAOUHSC_02699	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
SAOUHSC_02700	COG2814	Major facilitator Superfamily
SAOUHSC_02704	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
SAOUHSC_02713	COG0156	8-amino-7-oxononanoate synthase activity
SAOUHSC_02715	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
SAOUHSC_02716	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
SAOUHSC_02718	COG1132	(ABC) transporter
SAOUHSC_02719	COG1132	(ABC) transporter
SAOUHSC_02719	COG2375	cellular response to nickel ion
SAOUHSC_02723	COG1929	Belongs to the glycerate kinase type-1 family
SAOUHSC_02725	COG2814	Major facilitator Superfamily
SAOUHSC_02729	COG1113	amino acid transport
SAOUHSC_02733	COG0531	amino acid
SAOUHSC_02736	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
SAOUHSC_02739	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
SAOUHSC_02741	COG1174	glycine betaine transport
SAOUHSC_02743	COG1174	glycine betaine transport
SAOUHSC_02747	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
SAOUHSC_02750	COG0531	amino acid
SAOUHSC_02751	COG2272	Belongs to the type-B carboxylesterase lipase family
SAOUHSC_02752	COG2814	Major facilitator Superfamily
SAOUHSC_02753	COG0390	transport system, permease component
SAOUHSC_02754	COG4619	ABC transporter
SAOUHSC_02755	COG1363	Peptidase, m42
SAOUHSC_02759	COG4808	Protein conserved in bacteria
SAOUHSC_02760	COG0069	glutamate synthase activity
SAOUHSC_02763	COG1124	(ABC) transporter
SAOUHSC_02764	COG0444	Belongs to the ABC transporter superfamily
SAOUHSC_02765	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
SAOUHSC_02766	COG0601	transmembrane transport
SAOUHSC_02767	COG0747	negative chemotaxis
SAOUHSC_02772	COG1028	Short-chain dehydrogenase reductase Sdr
SAOUHSC_02773	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
SAOUHSC_02774	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
SAOUHSC_02791	COG0494	nUDIX hydrolase
SAOUHSC_02798	COG3583	domain protein
SAOUHSC_02799	COG1846	Transcriptional regulator
SAOUHSC_02800	COG1846	Transcriptional regulator
SAOUHSC_02803	COG4932	domain protein
SAOUHSC_02808	COG1070	Carbohydrate kinase
SAOUHSC_02809	COG1802	Transcriptional regulator
SAOUHSC_02810	COG0789	Transcriptional regulator
SAOUHSC_02811	COG2357	RelA SpoT domain protein
SAOUHSC_02812	COG4876	unkown
SAOUHSC_02815	COG2271	Major facilitator Superfamily
SAOUHSC_02816	COG0586	Pfam SNARE associated Golgi protein
SAOUHSC_02818	COG2814	Major facilitator Superfamily
SAOUHSC_02819	COG1846	Transcriptional regulator
SAOUHSC_02820	COG1131	(ABC) transporter
SAOUHSC_02824	COG0400	carboxylic ester hydrolase activity
SAOUHSC_02825	COG0346	lactoylglutathione lyase activity
SAOUHSC_02826	COG1846	Transcriptional regulator
SAOUHSC_02828	COG2514	catechol 2,3-dioxygenase activity
SAOUHSC_02831	COG0561	phosphatase activity
SAOUHSC_02832	COG1131	(ABC) transporter
SAOUHSC_02834	COG3764	Sortase (surface protein transpeptidase)
SAOUHSC_02839	COG1760	l-serine dehydratase
SAOUHSC_02840	COG1760	l-serine dehydratase
SAOUHSC_02843	COG0697	spore germination
SAOUHSC_02844	COG0657	acetylesterase activity
SAOUHSC_02849	COG0028	Belongs to the TPP enzyme family
SAOUHSC_02852	COG0583	DNA-binding transcription factor activity
SAOUHSC_02855	COG3942	CHAP domain
SAOUHSC_02860	COG3425	synthase
SAOUHSC_02861	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
SAOUHSC_02862	COG0542	response to heat
SAOUHSC_02866	COG2409	Drug exporters of the RND superfamily
SAOUHSC_02876	COG0436	Aminotransferase
SAOUHSC_02883	COG3942	CHAP domain
SAOUHSC_02885	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
SAOUHSC_02885	COG2755	lipolytic protein G-D-S-L family
SAOUHSC_02891	COG1309	transcriptional regulator
SAOUHSC_02900	COG0596	Alpha beta hydrolase
SAOUHSC_02908	COG3001	Fructosamine kinase
SAOUHSC_02909	COG0167	dihydroorotate dehydrogenase activity
SAOUHSC_02918	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
SAOUHSC_02920	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
SAOUHSC_02921	COG3527	Alpha-acetolactate decarboxylase
SAOUHSC_02923	COG0531	amino acid
SAOUHSC_02929	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
SAOUHSC_02933	COG1012	belongs to the aldehyde dehydrogenase family
SAOUHSC_02935	COG1510	regulation of RNA biosynthetic process
SAOUHSC_02937	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
SAOUHSC_02943	COG2851	Citrate transporter
SAOUHSC_02947	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
SAOUHSC_02949	COG0386	Belongs to the glutathione peroxidase family
SAOUHSC_02954	COG1136	(ABC) transporter
SAOUHSC_02955	COG2205	protein histidine kinase activity
SAOUHSC_02956	COG0745	RESPONSE REGULATOR receiver
SAOUHSC_02958	COG1785	Belongs to the alkaline phosphatase family
SAOUHSC_02961	COG1846	Transcriptional regulator
SAOUHSC_02970	COG1438	arginine binding
SAOUHSC_02974	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SAOUHSC_02974	COG3711	transcriptional antiterminator
SAOUHSC_02975	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SAOUHSC_02975	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
SAOUHSC_02975	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
SAOUHSC_02976	COG1482	cell wall glycoprotein biosynthetic process
SAOUHSC_02979	COG1705	Flagellar rod assembly protein muramidase FlgJ
SAOUHSC_02979	COG3942	CHAP domain
SAOUHSC_02980	COG3433	isochorismatase activity
SAOUHSC_02980	COG1535	isochorismatase
SAOUHSC_02984	COG0438	transferase activity, transferring glycosyl groups
SAOUHSC_02987	COG1073	alpha beta
SAOUHSC_02991	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SAOUHSC_02995	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
SAOUHSC_03006	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
SAOUHSC_03012	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
SAOUHSC_03030	COG0471	metal ion transport
SAOUHSC_03031	COG2962	Rard protein
SAOUHSC_03033	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
SAOUHSC_03036	COG1136	(ABC) transporter
SAOUHSC_03037	COG0577	efflux transmembrane transporter activity
SAOUHSC_03045	COG1278	Cold shock
SAOUHSC_03049	COG1475	DNA binding