locus-tag class description SA40_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SA40_RS00005 PF11638 DnaA N-terminal domain SA40_RS00005 PF00308 Bacterial dnaA protein SA40_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SA40_RS00010 PF02767 DNA polymerase III beta subunit, central domain SA40_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SA40_RS00015 PF01797 Transposase IS200 like SA40_RS00025 PF02463 RecF/RecN/SMC N terminal domain SA40_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus SA40_RS00030 PF01751 Toprim domain SA40_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS00030 PF00204 DNA gyrase B SA40_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller SA40_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A SA40_RS00040 PF01256 Carbohydrate kinase SA40_RS00045 PF00221 Aromatic amino acid lyase SA40_RS00050 PF02403 Seryl-tRNA synthetase N-terminal domain SA40_RS00050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SA40_RS00065 PF00561 alpha/beta hydrolase fold SA40_RS00075 PF02272 DHHA1 domain SA40_RS00075 PF01368 DHH family SA40_RS00080 PF03948 Ribosomal protein L9, C-terminal domain SA40_RS00080 PF01281 Ribosomal protein L9, N-terminal domain SA40_RS00085 PF00772 DnaB-like helicase N terminal domain SA40_RS00085 PF03796 DnaB-like helicase C terminal domain SA40_RS00090 PF00709 Adenylosuccinate synthetase SA40_RS00105 PF00072 Response regulator receiver domain SA40_RS00105 PF00486 Transcriptional regulatory protein, C terminal SA40_RS00110 PF00672 HAMP domain SA40_RS00110 PF00512 His Kinase A (phospho-acceptor) domain SA40_RS00110 PF13426 PAS domain SA40_RS00110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS00115 PF07435 YycH protein SA40_RS00125 PF00753 Metallo-beta-lactamase superfamily SA40_RS00130 PF02872 5'-nucleotidase, C-terminal domain SA40_RS00130 PF00149 Calcineurin-like phosphoesterase SA40_RS00135 PF02590 Predicted SPOUT methyltransferase SA40_RS00150 PF13610 DDE domain SA40_RS00160 PF03009 Glycerophosphoryl diester phosphodiesterase family SA40_RS00165 PF01575 MaoC like domain SA40_RS00170 PF00905 Penicillin binding protein transpeptidase domain SA40_RS00170 PF03717 Penicillin-binding Protein dimerisation domain SA40_RS00170 PF05223 NTF2-like N-terminal transpeptidase domain SA40_RS00175 PF05569 BlaR1 peptidase M56 SA40_RS00175 PF00905 Penicillin binding protein transpeptidase domain SA40_RS00230 PF13333 Integrase core domain SA40_RS00230 PF00665 Integrase core domain SA40_RS00230 PF13276 HTH-like domain SA40_RS00270 PF01037 Lrp/AsnC ligand binding domain SA40_RS00275 PF00583 Acetyltransferase (GNAT) family SA40_RS00280 PF01207 Dihydrouridine synthase (Dus) SA40_RS00300 PF03358 NADPH-dependent FMN reductase SA40_RS00310 PF00665 Integrase core domain SA40_RS00315 PF01695 IstB-like ATP binding protein SA40_RS00335 PF00388 Phosphatidylinositol-specific phospholipase C, X domain SA40_RS00345 PF12833 Helix-turn-helix domain SA40_RS00350 PF01546 Peptidase family M20/M25/M40 SA40_RS00350 PF07687 Peptidase dimerisation domain SA40_RS00355 PF07690 Major Facilitator Superfamily SA40_RS00360 PF02690 Na+/Pi-cotransporter SA40_RS00365 PF06100 MCRA family SA40_RS00370 PF00892 EamA-like transporter family SA40_RS00375 PF00155 Aminotransferase class I and II SA40_RS00375 PF00392 Bacterial regulatory proteins, gntR family SA40_RS00385 PF02652 L-lactate permease SA40_RS00390 PF01797 Transposase IS200 like SA40_RS00395 PF04650 YSIRK type signal peptide SA40_RS00395 PF03373 Octapeptide repeat SA40_RS00395 PF00746 LPXTG cell wall anchor motif SA40_RS00395 PF02216 B domain SA40_RS00395 PF01476 LysM domain SA40_RS00405 PF01032 FecCD transport family SA40_RS00410 PF01032 FecCD transport family SA40_RS00415 PF01497 Periplasmic binding protein SA40_RS00420 PF00291 Pyridoxal-phosphate dependent enzyme SA40_RS00425 PF02423 Ornithine cyclodeaminase/mu-crystallin family SA40_RS00430 PF06276 Ferric iron reductase FhuF-like transporter SA40_RS00430 PF04183 IucA / IucC family SA40_RS00435 PF07690 Major Facilitator Superfamily SA40_RS00435 PF00083 Sugar (and other) transporter SA40_RS00440 PF06276 Ferric iron reductase FhuF-like transporter SA40_RS00440 PF04183 IucA / IucC family SA40_RS00445 PF04183 IucA / IucC family SA40_RS00445 PF06276 Ferric iron reductase FhuF-like transporter SA40_RS00450 PF03328 HpcH/HpaI aldolase/citrate lyase family SA40_RS00455 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SA40_RS00455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SA40_RS00460 PF02195 ParB-like nuclease domain SA40_RS00490 PF01370 NAD dependent epimerase/dehydratase family SA40_RS00495 PF02397 Bacterial sugar transferase SA40_RS00500 PF00534 Glycosyl transferases group 1 SA40_RS00515 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SA40_RS00515 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SA40_RS00525 PF00392 Bacterial regulatory proteins, gntR family SA40_RS00525 PF07702 UTRA domain SA40_RS00535 PF01048 Phosphorylase superfamily SA40_RS00540 PF07690 Major Facilitator Superfamily SA40_RS00545 PF01791 DeoC/LacD family aldolase SA40_RS00550 PF01676 Metalloenzyme superfamily SA40_RS00555 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS00560 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS00565 PF00005 ABC transporter SA40_RS00580 PF02872 5'-nucleotidase, C-terminal domain SA40_RS00580 PF00149 Calcineurin-like phosphoesterase SA40_RS00595 PF00171 Aldehyde dehydrogenase family SA40_RS00595 PF00465 Iron-containing alcohol dehydrogenase SA40_RS00600 PF02706 Chain length determinant protein SA40_RS00605 PF13614 AAA domain SA40_RS00615 PF02719 Polysaccharide biosynthesis protein SA40_RS00620 PF02719 Polysaccharide biosynthesis protein SA40_RS00620 PF08485 Polysaccharide biosynthesis protein C-terminal SA40_RS00625 PF01370 NAD dependent epimerase/dehydratase family SA40_RS00630 PF02350 UDP-N-acetylglucosamine 2-epimerase SA40_RS00645 PF00132 Bacterial transferase hexapeptide (six repeats) SA40_RS00645 PF14602 Hexapeptide repeat of succinyl-transferase SA40_RS00645 PF12464 Maltose acetyltransferase SA40_RS00660 PF02397 Bacterial sugar transferase SA40_RS00670 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SA40_RS00670 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SA40_RS00670 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SA40_RS00675 PF02350 UDP-N-acetylglucosamine 2-epimerase SA40_RS00680 PF03992 Antibiotic biosynthesis monooxygenase SA40_RS00685 PF04304 Protein of unknown function (DUF454) SA40_RS00690 PF00171 Aldehyde dehydrogenase family SA40_RS00695 PF16916 Dimerisation domain of Zinc Transporter SA40_RS00695 PF01545 Cation efflux family SA40_RS00710 PF00005 ABC transporter SA40_RS00720 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS00725 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SA40_RS00725 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SA40_RS00725 PF02770 Acyl-CoA dehydrogenase, middle domain SA40_RS00735 PF00501 AMP-binding enzyme SA40_RS00735 PF00668 Condensation domain SA40_RS00735 PF00550 Phosphopantetheine attachment site SA40_RS00735 PF00975 Thioesterase domain SA40_RS00735 PF13193 AMP-binding enzyme C-terminal domain SA40_RS00745 PF07274 Protein of unknown function (DUF1440) SA40_RS00750 PF00696 Amino acid kinase family SA40_RS00755 PF01960 ArgJ family SA40_RS00760 PF02774 Semialdehyde dehydrogenase, dimerisation domain SA40_RS00760 PF01118 Semialdehyde dehydrogenase, NAD binding domain SA40_RS00765 PF00202 Aminotransferase class-III SA40_RS00770 PF05525 Branched-chain amino acid transport protein SA40_RS00775 PF00857 Isochorismatase family SA40_RS00780 PF00205 Thiamine pyrophosphate enzyme, central domain SA40_RS00780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SA40_RS00780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SA40_RS00785 PF02378 Phosphotransferase system, EIIC SA40_RS00785 PF00367 phosphotransferase system, EIIB SA40_RS00785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SA40_RS00800 PF00367 phosphotransferase system, EIIB SA40_RS00800 PF02378 Phosphotransferase system, EIIC SA40_RS00805 PF01418 Helix-turn-helix domain, rpiR family SA40_RS00805 PF01380 SIS domain SA40_RS00815 PF18766 SWI2/SNF2 ATPase SA40_RS00815 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SA40_RS00815 PF12008 Type I restriction and modification enzyme - subunit R C terminal SA40_RS00825 PF00005 ABC transporter SA40_RS00825 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SA40_RS00830 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS00835 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS00835 PF12911 N-terminal TM domain of oligopeptide transport permease C SA40_RS00850 PF04507 Csa1 family SA40_RS00855 PF02525 Flavodoxin-like fold SA40_RS00860 PF01551 Peptidase family M23 SA40_RS00860 PF08460 Bacterial SH3 domain SA40_RS00865 PF00005 ABC transporter SA40_RS00865 PF17912 MalK OB fold domain SA40_RS00865 PF03459 TOBE domain SA40_RS00875 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS00880 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS00885 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SA40_RS00885 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SA40_RS00890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SA40_RS00890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain SA40_RS00900 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SA40_RS00905 PF07690 Major Facilitator Superfamily SA40_RS00910 PF00072 Response regulator receiver domain SA40_RS00910 PF12833 Helix-turn-helix domain SA40_RS00915 PF06580 Histidine kinase SA40_RS00925 PF01228 Glycine radical SA40_RS00925 PF02901 Pyruvate formate lyase-like SA40_RS00930 PF04055 Radical SAM superfamily SA40_RS00950 PF08764 Staphylococcus aureus coagulase SA40_RS00950 PF04022 Staphylocoagulase repeat SA40_RS00960 PF02803 Thiolase, C-terminal domain SA40_RS00960 PF00108 Thiolase, N-terminal domain SA40_RS00965 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SA40_RS00965 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SA40_RS00970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SA40_RS00970 PF02770 Acyl-CoA dehydrogenase, middle domain SA40_RS00970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SA40_RS00975 PF00501 AMP-binding enzyme SA40_RS00975 PF13193 AMP-binding enzyme C-terminal domain SA40_RS00980 PF01144 Coenzyme A transferase SA40_RS00990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SA40_RS00995 PF04343 Protein of unknown function, DUF488 SA40_RS01005 PF00042 Globin SA40_RS01005 PF00175 Oxidoreductase NAD-binding domain SA40_RS01005 PF00970 Oxidoreductase FAD-binding domain SA40_RS01015 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SA40_RS01015 PF00056 lactate/malate dehydrogenase, NAD binding domain SA40_RS01025 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SA40_RS01025 PF00367 phosphotransferase system, EIIB SA40_RS01025 PF02378 Phosphotransferase system, EIIC SA40_RS01030 PF01156 Inosine-uridine preferring nucleoside hydrolase SA40_RS01050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SA40_RS01055 PF03611 PTS system sugar-specific permease component SA40_RS01060 PF08240 Alcohol dehydrogenase GroES-like domain SA40_RS01060 PF00107 Zinc-binding dehydrogenase SA40_RS01070 PF00107 Zinc-binding dehydrogenase SA40_RS01070 PF08240 Alcohol dehydrogenase GroES-like domain SA40_RS01075 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SA40_RS01080 PF00107 Zinc-binding dehydrogenase SA40_RS01080 PF08240 Alcohol dehydrogenase GroES-like domain SA40_RS01085 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SA40_RS01090 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SA40_RS01095 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SA40_RS01100 PF08240 Alcohol dehydrogenase GroES-like domain SA40_RS01100 PF00107 Zinc-binding dehydrogenase SA40_RS01105 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SA40_RS01110 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 SA40_RS01110 PF00535 Glycosyl transferase family 2 SA40_RS01115 PF04405 Domain of Unknown function (DUF542) SA40_RS01115 PF01814 Hemerythrin HHE cation binding domain SA40_RS01120 PF07694 5TMR of 5TMR-LYT SA40_RS01120 PF06580 Histidine kinase SA40_RS01120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS01125 PF04397 LytTr DNA-binding domain SA40_RS01125 PF00072 Response regulator receiver domain SA40_RS01130 PF03788 LrgA family SA40_RS01135 PF04172 LrgB-like family SA40_RS01140 PF00155 Aminotransferase class I and II SA40_RS01140 PF00392 Bacterial regulatory proteins, gntR family SA40_RS01145 PF02378 Phosphotransferase system, EIIC SA40_RS01145 PF00367 phosphotransferase system, EIIB SA40_RS01145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SA40_RS01150 PF00232 Glycosyl hydrolase family 1 SA40_RS01155 PF13649 Methyltransferase domain SA40_RS01165 PF00294 pfkB family carbohydrate kinase SA40_RS01170 PF05025 RbsD / FucU transport protein family SA40_RS01175 PF06800 Sugar transport protein SA40_RS01180 PF00356 Bacterial regulatory proteins, lacI family SA40_RS01180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family SA40_RS01195 PF07690 Major Facilitator Superfamily SA40_RS01200 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family SA40_RS01205 PF01551 Peptidase family M23 SA40_RS01210 PF00005 ABC transporter SA40_RS01230 PF05257 CHAP domain SA40_RS01230 PF01476 LysM domain SA40_RS01235 PF06013 Proteins of 100 residues with WXG SA40_RS01245 PF10661 WXG100 protein secretion system (Wss), protein EssA SA40_RS01250 PF08817 WXG100 protein secretion system (Wss), protein YukD SA40_RS01255 PF10140 WXG100 protein secretion system (Wss), protein YukC SA40_RS01260 PF12538 DNA transporter SA40_RS01260 PF01580 FtsK/SpoIIIE family SA40_RS01305 PF04634 Protein of unknown function, DUF600 SA40_RS01330 PF04634 Protein of unknown function, DUF600 SA40_RS01335 PF04634 Protein of unknown function, DUF600 SA40_RS01355 PF05525 Branched-chain amino acid transport protein SA40_RS01360 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SA40_RS01370 PF02687 FtsX-like permease family SA40_RS01375 PF00005 ABC transporter SA40_RS01390 PF04227 Indigoidine synthase A like protein SA40_RS01395 PF07662 Na+ dependent nucleoside transporter C-terminus SA40_RS01395 PF01773 Na+ dependent nucleoside transporter N-terminus SA40_RS01400 PF00474 Sodium:solute symporter family SA40_RS01405 PF00701 Dihydrodipicolinate synthetase family SA40_RS01410 PF00480 ROK family SA40_RS01415 PF01380 SIS domain SA40_RS01415 PF01418 Helix-turn-helix domain, rpiR family SA40_RS01420 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SA40_RS01425 PF07670 Nucleoside recognition SA40_RS01430 PF04650 YSIRK type signal peptide SA40_RS01440 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SA40_RS01450 PF00296 Luciferase-like monooxygenase SA40_RS01455 PF01597 Glycine cleavage H-protein SA40_RS01460 PF01661 Macro domain SA40_RS01470 PF10437 Bacterial lipoate protein ligase C-terminus SA40_RS01470 PF03099 Biotin/lipoate A/B protein ligase family SA40_RS01475 PF03611 PTS system sugar-specific permease component SA40_RS01485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SA40_RS01490 PF03123 CAT RNA binding domain SA40_RS01490 PF00874 PRD domain SA40_RS01500 PF01554 MatE SA40_RS01510 PF07690 Major Facilitator Superfamily SA40_RS01515 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SA40_RS01520 PF00296 Luciferase-like monooxygenase SA40_RS01525 PF03358 NADPH-dependent FMN reductase SA40_RS01530 PF03601 Conserved hypothetical protein 698 SA40_RS01535 PF13302 Acetyltransferase (GNAT) domain SA40_RS01540 PF09375 Imelysin SA40_RS01545 PF04261 Dyp-type peroxidase family SA40_RS01550 PF03239 Iron permease FTR1 family SA40_RS01555 PF00902 Sec-independent protein translocase protein (TatC) SA40_RS01560 PF02416 mttA/Hcf106 family SA40_RS01570 PF01381 Helix-turn-helix SA40_RS01580 PF00005 ABC transporter SA40_RS01600 PF02803 Thiolase, C-terminal domain SA40_RS01600 PF00108 Thiolase, N-terminal domain SA40_RS01610 PF01717 Cobalamin-independent synthase, Catalytic domain SA40_RS01610 PF08267 Cobalamin-independent synthase, N-terminal domain SA40_RS01615 PF02574 Homocysteine S-methyltransferase SA40_RS01615 PF02219 Methylenetetrahydrofolate reductase SA40_RS01620 PF01053 Cys/Met metabolism PLP-dependent enzyme SA40_RS01625 PF01053 Cys/Met metabolism PLP-dependent enzyme SA40_RS01630 PF02195 ParB-like nuclease domain SA40_RS01630 PF17762 HTH domain found in ParB protein SA40_RS01635 PF00924 Mechanosensitive ion channel SA40_RS01640 PF06107 Bacterial protein of unknown function (DUF951) SA40_RS01645 PF01926 50S ribosome-binding GTPase SA40_RS01645 PF06071 Protein of unknown function (DUF933) SA40_RS01650 PF00665 Integrase core domain SA40_RS01655 PF01695 IstB-like ATP binding protein SA40_RS01665 PF01250 Ribosomal protein S6 SA40_RS01670 PF00436 Single-strand binding protein family SA40_RS01675 PF01084 Ribosomal protein S18 SA40_RS01685 PF00589 Phage integrase family SA40_RS01685 PF14659 Phage integrase, N-terminal SAM-like domain SA40_RS01740 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS01740 PF13192 Thioredoxin domain SA40_RS01745 PF00578 AhpC/TSA family SA40_RS01745 PF10417 C-terminal domain of 1-Cys peroxiredoxin SA40_RS01750 PF00881 Nitroreductase family SA40_RS01755 PF00375 Sodium:dicarboxylate symporter family SA40_RS01775 PF11181 Heat induced stress protein YflT SA40_RS01785 PF00860 Permease family SA40_RS01790 PF00571 CBS domain SA40_RS01790 PF00478 IMP dehydrogenase / GMP reductase domain SA40_RS01795 PF00958 GMP synthase C terminal domain SA40_RS01795 PF00117 Glutamine amidotransferase class-I SA40_RS01840 PF11208 Protein of unknown function (DUF2992) SA40_RS01845 PF04463 Protein of unknown function (DUF523) SA40_RS01855 PF06993 Protein of unknown function (DUF1304) SA40_RS01865 PF09199 Staphylococcal superantigen-like OB-fold domain SA40_RS01865 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS01870 PF01797 Transposase IS200 like SA40_RS01875 PF09199 Staphylococcal superantigen-like OB-fold domain SA40_RS01875 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS01880 PF09199 Staphylococcal superantigen-like OB-fold domain SA40_RS01880 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS01890 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS01890 PF09199 Staphylococcal superantigen-like OB-fold domain SA40_RS01895 PF09199 Staphylococcal superantigen-like OB-fold domain SA40_RS01895 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS01905 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS01905 PF09199 Staphylococcal superantigen-like OB-fold domain SA40_RS01910 PF09199 Staphylococcal superantigen-like OB-fold domain SA40_RS01910 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS01915 PF09199 Staphylococcal superantigen-like OB-fold domain SA40_RS01915 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS01920 PF09199 Staphylococcal superantigen-like OB-fold domain SA40_RS01920 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS01925 PF12161 HsdM N-terminal domain SA40_RS01925 PF02384 N-6 DNA Methylase SA40_RS01935 PF09199 Staphylococcal superantigen-like OB-fold domain SA40_RS01935 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS01950 PF04507 Csa1 family SA40_RS01955 PF04507 Csa1 family SA40_RS01960 PF04507 Csa1 family SA40_RS01965 PF01695 IstB-like ATP binding protein SA40_RS01970 PF00665 Integrase core domain SA40_RS01980 PF04507 Csa1 family SA40_RS01985 PF04507 Csa1 family SA40_RS01990 PF04507 Csa1 family SA40_RS02020 PF07683 Cobalamin synthesis protein cobW C-terminal domain SA40_RS02020 PF02492 CobW/HypB/UreG, nucleotide-binding domain SA40_RS02030 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SA40_RS02030 PF00361 Proton-conducting membrane transporter SA40_RS02035 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) SA40_RS02040 PF10057 Uncharacterized conserved protein (DUF2294) SA40_RS02055 PF12146 Serine aminopeptidase, S33 SA40_RS02060 PF00209 Sodium:neurotransmitter symporter family SA40_RS02065 PF00291 Pyridoxal-phosphate dependent enzyme SA40_RS02070 PF01053 Cys/Met metabolism PLP-dependent enzyme SA40_RS02075 PF09383 NIL domain SA40_RS02075 PF00005 ABC transporter SA40_RS02080 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS02085 PF03180 NLPA lipoprotein SA40_RS02090 PF01476 LysM domain SA40_RS02090 PF05257 CHAP domain SA40_RS02100 PF00293 NUDIX domain SA40_RS02120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SA40_RS02120 PF03466 LysR substrate binding domain SA40_RS02125 PF01645 Conserved region in glutamate synthase SA40_RS02125 PF01493 GXGXG motif SA40_RS02125 PF04898 Glutamate synthase central domain SA40_RS02125 PF00310 Glutamine amidotransferases class-II SA40_RS02130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SA40_RS02130 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS02140 PF02378 Phosphotransferase system, EIIC SA40_RS02140 PF00367 phosphotransferase system, EIIB SA40_RS02145 PF16657 Maltogenic Amylase, C-terminal domain SA40_RS02145 PF00128 Alpha amylase, catalytic domain SA40_RS02150 PF00392 Bacterial regulatory proteins, gntR family SA40_RS02150 PF07702 UTRA domain SA40_RS02160 PF12169 DNA polymerase III subunits gamma and tau domain III SA40_RS02165 PF02575 YbaB/EbfC DNA-binding family SA40_RS02170 PF13662 Toprim domain SA40_RS02170 PF02132 RecR protein SA40_RS02200 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SA40_RS02200 PF01276 Orn/Lys/Arg decarboxylase, major domain SA40_RS02205 PF02223 Thymidylate kinase SA40_RS02210 PF06153 Cyclic-di-AMP receptor SA40_RS02220 PF09115 DNA polymerase III, delta subunit, C terminal SA40_RS02225 PF04468 PSP1 C-terminal conserved region SA40_RS02230 PF06156 Initiation control protein YabA SA40_RS02235 PF05175 Methyltransferase small domain SA40_RS02240 PF01541 GIY-YIG catalytic domain SA40_RS02245 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SA40_RS02255 PF09334 tRNA synthetases class I (M) SA40_RS02255 PF08264 Anticodon-binding domain of tRNA SA40_RS02255 PF01588 Putative tRNA binding domain SA40_RS02260 PF01026 TatD related DNase SA40_RS02265 PF01751 Toprim domain SA40_RS02265 PF13331 Domain of unknown function (DUF4093) SA40_RS02270 PF00398 Ribosomal RNA adenine dimethylase SA40_RS02275 PF06257 Biofilm formation stimulator VEG SA40_RS02280 PF00288 GHMP kinases N terminal domain SA40_RS02280 PF08544 GHMP kinases C terminal SA40_RS02285 PF00156 Phosphoribosyl transferase domain SA40_RS02285 PF09182 Bacterial purine repressor, N-terminal SA40_RS02290 PF01042 Endoribonuclease L-PSP SA40_RS02295 PF04026 SpoVG SA40_RS02300 PF01797 Transposase IS200 like SA40_RS02310 PF00483 Nucleotidyl transferase SA40_RS02310 PF00132 Bacterial transferase hexapeptide (six repeats) SA40_RS02315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SA40_RS02315 PF14572 Phosphoribosyl synthetase-associated domain SA40_RS02320 PF01386 Ribosomal L25p family SA40_RS02320 PF14693 Ribosomal protein TL5, C-terminal domain SA40_RS02325 PF01195 Peptidyl-tRNA hydrolase SA40_RS02330 PF17757 UvrB interaction domain SA40_RS02330 PF03461 TRCF domain SA40_RS02330 PF00271 Helicase conserved C-terminal domain SA40_RS02330 PF02559 CarD-like/TRCF domain SA40_RS02330 PF00270 DEAD/DEAH box helicase SA40_RS02335 PF14667 Polysaccharide biosynthesis C-terminal domain SA40_RS02335 PF01943 Polysaccharide biosynthesis protein SA40_RS02340 PF03819 MazG nucleotide pyrophosphohydrolase domain SA40_RS02340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SA40_RS02345 PF01479 S4 domain SA40_RS02355 PF00575 S1 RNA binding domain SA40_RS02360 PF01171 PP-loop family SA40_RS02360 PF11734 TilS substrate C-terminal domain SA40_RS02365 PF00156 Phosphoribosyl transferase domain SA40_RS02370 PF01434 Peptidase family M41 SA40_RS02370 PF06480 FtsH Extracellular SA40_RS02370 PF17862 AAA+ lid domain SA40_RS02370 PF00004 ATPase family associated with various cellular activities (AAA) SA40_RS02375 PF01430 Hsp33 protein SA40_RS02380 PF00291 Pyridoxal-phosphate dependent enzyme SA40_RS02385 PF00809 Pterin binding enzyme SA40_RS02390 PF02152 Dihydroneopterin aldolase SA40_RS02395 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SA40_RS02405 PF00152 tRNA synthetases class II (D, K and N) SA40_RS02405 PF01336 OB-fold nucleic acid binding domain SA40_RS02470 PF00155 Aminotransferase class I and II SA40_RS02470 PF00392 Bacterial regulatory proteins, gntR family SA40_RS02475 PF01680 SOR/SNZ family SA40_RS02480 PF01174 SNO glutamine amidotransferase family SA40_RS02485 PF01773 Na+ dependent nucleoside transporter N-terminus SA40_RS02485 PF07662 Na+ dependent nucleoside transporter C-terminus SA40_RS02490 PF05848 CtsR N-terminal HTH domain SA40_RS02490 PF17727 CtsR C-terminal dimerization domain SA40_RS02495 PF02151 UvrB/uvrC motif SA40_RS02500 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain SA40_RS02505 PF17871 AAA lid domain SA40_RS02505 PF10431 C-terminal, D2-small domain, of ClpB protein SA40_RS02505 PF07724 AAA domain (Cdc48 subfamily) SA40_RS02505 PF02861 Clp amino terminal domain, pathogenicity island component SA40_RS02505 PF00004 ATPase family associated with various cellular activities (AAA) SA40_RS02515 PF18073 Rubredoxin metal binding domain SA40_RS02525 PF00749 tRNA synthetases class I (E and Q), catalytic domain SA40_RS02530 PF00132 Bacterial transferase hexapeptide (six repeats) SA40_RS02535 PF01406 tRNA synthetases class I (C) catalytic domain SA40_RS02535 PF09190 DALR domain SA40_RS02540 PF00636 Ribonuclease III domain SA40_RS02545 PF00588 SpoU rRNA Methylase family SA40_RS02545 PF08032 RNA 2'-O ribose methyltransferase substrate binding SA40_RS02560 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SA40_RS02565 PF02357 Transcription termination factor nusG SA40_RS02565 PF00467 KOW motif SA40_RS02570 PF03946 Ribosomal protein L11, N-terminal domain SA40_RS02570 PF00298 Ribosomal protein L11, RNA binding domain SA40_RS02575 PF00687 Ribosomal protein L1p/L10e family SA40_RS02580 PF00466 Ribosomal protein L10 SA40_RS02585 PF16320 Ribosomal protein L7/L12 dimerisation domain SA40_RS02585 PF00542 Ribosomal protein L7/L12 C-terminal domain SA40_RS02590 PF05175 Methyltransferase small domain SA40_RS02595 PF00562 RNA polymerase Rpb2, domain 6 SA40_RS02595 PF10385 RNA polymerase beta subunit external 1 domain SA40_RS02595 PF04560 RNA polymerase Rpb2, domain 7 SA40_RS02595 PF04561 RNA polymerase Rpb2, domain 2 SA40_RS02595 PF04565 RNA polymerase Rpb2, domain 3 SA40_RS02595 PF04563 RNA polymerase beta subunit SA40_RS02600 PF05000 RNA polymerase Rpb1, domain 4 SA40_RS02600 PF04997 RNA polymerase Rpb1, domain 1 SA40_RS02600 PF04998 RNA polymerase Rpb1, domain 5 SA40_RS02600 PF04983 RNA polymerase Rpb1, domain 3 SA40_RS02600 PF00623 RNA polymerase Rpb1, domain 2 SA40_RS02605 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SA40_RS02610 PF00164 Ribosomal protein S12/S23 SA40_RS02615 PF00177 Ribosomal protein S7p/S5e SA40_RS02620 PF00679 Elongation factor G C-terminus SA40_RS02620 PF14492 Elongation Factor G, domain II SA40_RS02620 PF03764 Elongation factor G, domain IV SA40_RS02620 PF00009 Elongation factor Tu GTP binding domain SA40_RS02620 PF03144 Elongation factor Tu domain 2 SA40_RS02625 PF00009 Elongation factor Tu GTP binding domain SA40_RS02625 PF03144 Elongation factor Tu domain 2 SA40_RS02625 PF03143 Elongation factor Tu C-terminal domain SA40_RS02630 PF01546 Peptidase family M20/M25/M40 SA40_RS02630 PF07687 Peptidase dimerisation domain SA40_RS02635 PF00155 Aminotransferase class I and II SA40_RS02640 PF01965 DJ-1/PfpI family SA40_RS02645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SA40_RS02645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SA40_RS02650 PF01370 NAD dependent epimerase/dehydratase family SA40_RS02655 PF01063 Amino-transferase class IV SA40_RS02665 PF01712 Deoxynucleoside kinase SA40_RS02670 PF01712 Deoxynucleoside kinase SA40_RS02675 PF14437 MafB19-like deaminase SA40_RS02685 PF03358 NADPH-dependent FMN reductase SA40_RS02690 PF04650 YSIRK type signal peptide SA40_RS02690 PF17961 Bacterial Ig domain SA40_RS02690 PF17210 SdrD B-like domain SA40_RS02690 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SA40_RS02690 PF00746 LPXTG cell wall anchor motif SA40_RS02695 PF17210 SdrD B-like domain SA40_RS02695 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SA40_RS02695 PF04650 YSIRK type signal peptide SA40_RS02695 PF00746 LPXTG cell wall anchor motif SA40_RS02695 PF17961 Bacterial Ig domain SA40_RS02700 PF17210 SdrD B-like domain SA40_RS02700 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SA40_RS02700 PF00746 LPXTG cell wall anchor motif SA40_RS02700 PF17961 Bacterial Ig domain SA40_RS02700 PF04650 YSIRK type signal peptide SA40_RS02705 PF00534 Glycosyl transferases group 1 SA40_RS02720 PF02649 Type I GTP cyclohydrolase folE2 SA40_RS02725 PF02585 GlcNAc-PI de-N-acetylase SA40_RS02735 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SA40_RS02740 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SA40_RS02745 PF01380 SIS domain SA40_RS02755 PF07690 Major Facilitator Superfamily SA40_RS02760 PF13193 AMP-binding enzyme C-terminal domain SA40_RS02760 PF00501 AMP-binding enzyme SA40_RS02765 PF00108 Thiolase, N-terminal domain SA40_RS02765 PF02803 Thiolase, C-terminal domain SA40_RS02780 PF17412 Family of unknown function SA40_RS02785 PF08543 Phosphomethylpyrimidine kinase SA40_RS02790 PF03167 Uracil DNA glycosylase superfamily SA40_RS02800 PF04241 Protein of unknown function (DUF423) SA40_RS02820 PF01797 Transposase IS200 like SA40_RS02825 PF06778 Chlorite dismutase SA40_RS02830 PF01515 Phosphate acetyl/butaryl transferase SA40_RS02835 PF03099 Biotin/lipoate A/B protein ligase family SA40_RS02840 PF00288 GHMP kinases N terminal domain SA40_RS02840 PF08544 GHMP kinases C terminal SA40_RS02850 PF00288 GHMP kinases N terminal domain SA40_RS02850 PF08544 GHMP kinases C terminal SA40_RS02855 PF07293 Protein of unknown function (DUF1450) SA40_RS02860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SA40_RS02860 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS02910 PF00248 Aldo/keto reductase family SA40_RS02915 PF03358 NADPH-dependent FMN reductase SA40_RS02925 PF01966 HD domain SA40_RS02930 PF08741 YwhD family SA40_RS02935 PF08240 Alcohol dehydrogenase GroES-like domain SA40_RS02935 PF00107 Zinc-binding dehydrogenase SA40_RS02950 PF03485 Arginyl tRNA synthetase N terminal domain SA40_RS02950 PF05746 DALR anticodon binding domain SA40_RS02950 PF00750 tRNA synthetases class I (R) SA40_RS02960 PF01497 Periplasmic binding protein SA40_RS02965 PF01032 FecCD transport family SA40_RS02970 PF13419 Haloacid dehalogenase-like hydrolase SA40_RS02975 PF00561 alpha/beta hydrolase fold SA40_RS02990 PF12697 Alpha/beta hydrolase family SA40_RS03015 PF00589 Phage integrase family SA40_RS03020 PF13244 Domain of unknown function (DUF4040) SA40_RS03020 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SA40_RS03020 PF00361 Proton-conducting membrane transporter SA40_RS03025 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SA40_RS03030 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SA40_RS03035 PF00361 Proton-conducting membrane transporter SA40_RS03040 PF01899 Na+/H+ ion antiporter subunit SA40_RS03045 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SA40_RS03050 PF03334 Na+/H+ antiporter subunit SA40_RS03060 PF01297 Zinc-uptake complex component A periplasmic SA40_RS03065 PF00950 ABC 3 transport family SA40_RS03070 PF00005 ABC transporter SA40_RS03075 PF18357 Diphteria toxin repressor SH3 domain SA40_RS03075 PF01325 Iron dependent repressor, N-terminal DNA binding domain SA40_RS03075 PF02742 Iron dependent repressor, metal binding and dimerisation domain SA40_RS03085 PF03808 Glycosyl transferase WecB/TagA/CpsF family SA40_RS03090 PF00005 ABC transporter SA40_RS03095 PF01061 ABC-2 type transporter SA40_RS03100 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SA40_RS03105 PF00535 Glycosyl transferase family 2 SA40_RS03110 PF01467 Cytidylyltransferase-like SA40_RS03115 PF07943 Penicillin-binding protein 5, C-terminal domain SA40_RS03115 PF00768 D-alanyl-D-alanine carboxypeptidase SA40_RS03120 PF00664 ABC transporter transmembrane region SA40_RS03120 PF00005 ABC transporter SA40_RS03125 PF01773 Na+ dependent nucleoside transporter N-terminus SA40_RS03125 PF07662 Na+ dependent nucleoside transporter C-terminus SA40_RS03135 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 SA40_RS03135 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SA40_RS03140 PF00005 ABC transporter SA40_RS03145 PF01032 FecCD transport family SA40_RS03150 PF01032 FecCD transport family SA40_RS03155 PF02733 Dak1 domain SA40_RS03160 PF02734 DAK2 domain SA40_RS03165 PF03610 PTS system fructose IIA component SA40_RS03200 PF01370 NAD dependent epimerase/dehydratase family SA40_RS03205 PF00072 Response regulator receiver domain SA40_RS03205 PF00486 Transcriptional regulatory protein, C terminal SA40_RS03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS03215 PF00005 ABC transporter SA40_RS03220 PF02687 FtsX-like permease family SA40_RS03225 PF01865 Protein of unknown function DUF47 SA40_RS03230 PF01384 Phosphate transporter family SA40_RS03235 PF01476 LysM domain SA40_RS03235 PF05257 CHAP domain SA40_RS03245 PF12833 Helix-turn-helix domain SA40_RS03245 PF02311 AraC-like ligand binding domain SA40_RS03255 PF01709 Transcriptional regulator SA40_RS03275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SA40_RS03275 PF03466 LysR substrate binding domain SA40_RS03285 PF07690 Major Facilitator Superfamily SA40_RS03290 PF04306 Protein of unknown function (DUF456) SA40_RS03315 PF13302 Acetyltransferase (GNAT) domain SA40_RS03320 PF03641 Possible lysine decarboxylase SA40_RS03325 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 SA40_RS03335 PF02673 Bacitracin resistance protein BacA SA40_RS03340 PF00005 ABC transporter SA40_RS03340 PF00664 ABC transporter transmembrane region SA40_RS03345 PF00664 ABC transporter transmembrane region SA40_RS03345 PF00005 ABC transporter SA40_RS03350 PF01047 MarR family SA40_RS03355 PF07683 Cobalamin synthesis protein cobW C-terminal domain SA40_RS03355 PF02492 CobW/HypB/UreG, nucleotide-binding domain SA40_RS03360 PF00248 Aldo/keto reductase family SA40_RS03370 PF00939 Sodium:sulfate symporter transmembrane region SA40_RS03375 PF00875 DNA photolyase SA40_RS03375 PF03441 FAD binding domain of DNA photolyase SA40_RS03395 PF07690 Major Facilitator Superfamily SA40_RS03405 PF04073 Aminoacyl-tRNA editing domain SA40_RS03410 PF08220 DeoR-like helix-turn-helix domain SA40_RS03410 PF00455 DeoR C terminal sensor domain SA40_RS03415 PF00294 pfkB family carbohydrate kinase SA40_RS03420 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SA40_RS03420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SA40_RS03430 PF01979 Amidohydrolase family SA40_RS03435 PF03471 Transporter associated domain SA40_RS03435 PF00571 CBS domain SA40_RS03435 PF01595 Cyclin M transmembrane N-terminal domain SA40_RS03440 PF00248 Aldo/keto reductase family SA40_RS03445 PF00535 Glycosyl transferase family 2 SA40_RS03450 PF00512 His Kinase A (phospho-acceptor) domain SA40_RS03450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS03455 PF00072 Response regulator receiver domain SA40_RS03455 PF00486 Transcriptional regulatory protein, C terminal SA40_RS03475 PF04055 Radical SAM superfamily SA40_RS03480 PF01242 6-pyruvoyl tetrahydropterin synthase SA40_RS03485 PF06508 Queuosine biosynthesis protein QueC SA40_RS03490 PF00117 Glutamine amidotransferase class-I SA40_RS03490 PF00591 Glycosyl transferase family, a/b domain SA40_RS03490 PF02885 Glycosyl transferase family, helical bundle domain SA40_RS03495 PF00425 chorismate binding enzyme SA40_RS03495 PF04715 Anthranilate synthase component I, N terminal region SA40_RS03520 PF00884 Sulfatase SA40_RS03530 PF12848 ABC transporter SA40_RS03530 PF16326 ABC transporter C-terminal domain SA40_RS03530 PF00005 ABC transporter SA40_RS03535 PF00270 DEAD/DEAH box helicase SA40_RS03535 PF00271 Helicase conserved C-terminal domain SA40_RS03535 PF00570 HRDC domain SA40_RS03535 PF16124 RecQ zinc-binding SA40_RS03535 PF09382 RQC domain SA40_RS03540 PF00005 ABC transporter SA40_RS03540 PF00571 CBS domain SA40_RS03545 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS03550 PF00155 Aminotransferase class I and II SA40_RS03555 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) SA40_RS03560 PF00781 Diacylglycerol kinase catalytic domain SA40_RS03570 PF00854 POT family SA40_RS03575 PF14489 QueF-like protein SA40_RS03585 PF07972 NrdI Flavodoxin like SA40_RS03590 PF08343 Ribonucleotide reductase N-terminal SA40_RS03590 PF02867 Ribonucleotide reductase, barrel domain SA40_RS03590 PF00317 Ribonucleotide reductase, all-alpha domain SA40_RS03595 PF00268 Ribonucleotide reductase, small chain SA40_RS03605 PF01032 FecCD transport family SA40_RS03610 PF01032 FecCD transport family SA40_RS03615 PF00005 ABC transporter SA40_RS03620 PF01497 Periplasmic binding protein SA40_RS03630 PF01565 FAD binding domain SA40_RS03630 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SA40_RS03650 PF02595 Glycerate kinase family SA40_RS03655 PF01546 Peptidase family M20/M25/M40 SA40_RS03655 PF07687 Peptidase dimerisation domain SA40_RS03670 PF07694 5TMR of 5TMR-LYT SA40_RS03670 PF00990 Diguanylate cyclase, GGDEF domain SA40_RS03675 PF00953 Glycosyl transferase family 4 SA40_RS03680 PF09186 Domain of unknown function (DUF1949) SA40_RS03680 PF01205 Uncharacterized protein family UPF0029 SA40_RS03685 PF02645 Uncharacterised protein, DegV family COG1307 SA40_RS03690 PF00271 Helicase conserved C-terminal domain SA40_RS03690 PF04851 Type III restriction enzyme, res subunit SA40_RS03700 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SA40_RS03700 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus SA40_RS03705 PF07516 SecA Wing and Scaffold domain SA40_RS03705 PF02810 SEC-C motif SA40_RS03705 PF01043 SecA preprotein cross-linking domain SA40_RS03705 PF07517 SecA DEAD-like domain SA40_RS03715 PF03462 PCRF domain SA40_RS03715 PF00472 RF-1 domain SA40_RS03725 PF01476 LysM domain SA40_RS03725 PF05257 CHAP domain SA40_RS03740 PF04851 Type III restriction enzyme, res subunit SA40_RS03740 PF02151 UvrB/uvrC motif SA40_RS03740 PF17757 UvrB interaction domain SA40_RS03740 PF00271 Helicase conserved C-terminal domain SA40_RS03740 PF12344 Ultra-violet resistance protein B SA40_RS03745 PF17760 UvrA interaction domain SA40_RS03745 PF17755 UvrA DNA-binding domain SA40_RS03745 PF00005 ABC transporter SA40_RS03750 PF07475 HPr Serine kinase C-terminal domain SA40_RS03750 PF02603 HPr Serine kinase N terminus SA40_RS03755 PF01790 Prolipoprotein diacylglyceryl transferase SA40_RS03760 PF14602 Hexapeptide repeat of succinyl-transferase SA40_RS03770 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS03780 PF03668 P-loop ATPase protein family SA40_RS03785 PF01933 Uncharacterised protein family UPF0052 SA40_RS03790 PF10298 WhiA N-terminal LAGLIDADG-like domain SA40_RS03790 PF14527 WhiA LAGLIDADG-like domain SA40_RS03790 PF02650 WhiA C-terminal HTH domain SA40_RS03800 PF00574 Clp protease SA40_RS03805 PF00390 Malic enzyme, N-terminal domain SA40_RS03805 PF03949 Malic enzyme, NAD binding domain SA40_RS03810 PF01370 NAD dependent epimerase/dehydratase family SA40_RS03810 PF08338 Domain of unknown function (DUF1731) SA40_RS03825 PF04198 Putative sugar-binding domain SA40_RS03830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SA40_RS03830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SA40_RS03835 PF00162 Phosphoglycerate kinase SA40_RS03840 PF00121 Triosephosphate isomerase SA40_RS03845 PF01676 Metalloenzyme superfamily SA40_RS03845 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SA40_RS03850 PF00113 Enolase, C-terminal TIM barrel domain SA40_RS03850 PF03952 Enolase, N-terminal domain SA40_RS03860 PF03840 Preprotein translocase SecG subunit SA40_RS03865 PF12146 Serine aminopeptidase, S33 SA40_RS03870 PF17876 Cold shock domain SA40_RS03870 PF00773 RNB domain SA40_RS03870 PF08206 Ribonuclease B OB domain SA40_RS03870 PF00575 S1 RNA binding domain SA40_RS03875 PF01668 SmpB protein SA40_RS03905 PF04650 YSIRK type signal peptide SA40_RS03905 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SA40_RS03905 PF00746 LPXTG cell wall anchor motif SA40_RS03905 PF17961 Bacterial Ig domain SA40_RS03910 PF08764 Staphylococcus aureus coagulase SA40_RS03910 PF04022 Staphylocoagulase repeat SA40_RS03925 PF00565 Staphylococcal nuclease homologue SA40_RS03930 PF00313 'Cold-shock' DNA-binding domain SA40_RS03970 PF00300 Histidine phosphatase superfamily (branch 1) SA40_RS03975 PF01810 LysE type translocator SA40_RS03985 PF02566 OsmC-like protein SA40_RS03990 PF01487 Type I 3-dehydroquinase SA40_RS04000 PF00085 Thioredoxin SA40_RS04005 PF03960 ArsC family SA40_RS04010 PF01597 Glycine cleavage H-protein SA40_RS04020 PF09234 Domain of unknown function (DUF1963) SA40_RS04030 PF01751 Toprim domain SA40_RS04040 PF00005 ABC transporter SA40_RS04040 PF09383 NIL domain SA40_RS04045 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS04050 PF03180 NLPA lipoprotein SA40_RS04055 PF14659 Phage integrase, N-terminal SAM-like domain SA40_RS04055 PF00589 Phage integrase family SA40_RS04060 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS04065 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS04160 PF10668 Phage terminase small subunit SA40_RS04160 PF03592 Terminase small subunit SA40_RS04165 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS04190 PF05532 CsbD-like SA40_RS04200 PF00005 ABC transporter SA40_RS04205 PF01458 Uncharacterized protein family (UPF0051) SA40_RS04210 PF00266 Aminotransferase class-V SA40_RS04215 PF01592 NifU-like N terminal domain SA40_RS04220 PF01458 Uncharacterized protein family (UPF0051) SA40_RS04235 PF01595 Cyclin M transmembrane N-terminal domain SA40_RS04235 PF03471 Transporter associated domain SA40_RS04235 PF00571 CBS domain SA40_RS04240 PF03060 Nitronate monooxygenase SA40_RS04250 PF01904 Protein of unknown function DUF72 SA40_RS04255 PF01925 Sulfite exporter TauE/SafE SA40_RS04265 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family SA40_RS04265 PF04055 Radical SAM superfamily SA40_RS04270 PF06265 Protein of unknown function (DUF1027) SA40_RS04280 PF01934 Protein of unknown function DUF86 SA40_RS04285 PF13344 Haloacid dehalogenase-like hydrolase SA40_RS04290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SA40_RS04290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SA40_RS04305 PF13193 AMP-binding enzyme C-terminal domain SA40_RS04305 PF00501 AMP-binding enzyme SA40_RS04310 PF03062 MBOAT, membrane-bound O-acyltransferase family SA40_RS04315 PF00550 Phosphopantetheine attachment site SA40_RS04320 PF04914 DltD protein SA40_RS04325 PF01106 NifU-like domain SA40_RS04330 PF07315 Protein of unknown function (DUF1462) SA40_RS04335 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS04340 PF07293 Protein of unknown function (DUF1450) SA40_RS04345 PF01521 Iron-sulphur cluster biosynthesis SA40_RS04350 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS04355 PF00883 Cytosol aminopeptidase family, catalytic domain SA40_RS04355 PF02789 Cytosol aminopeptidase family, N-terminal domain SA40_RS04360 PF13726 Na+-H+ antiporter family SA40_RS04360 PF03553 Na+/H+ antiporter family SA40_RS04365 PF03061 Thioesterase superfamily SA40_RS04375 PF03334 Na+/H+ antiporter subunit SA40_RS04380 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) SA40_RS04385 PF01899 Na+/H+ ion antiporter subunit SA40_RS04390 PF00361 Proton-conducting membrane transporter SA40_RS04395 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SA40_RS04400 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter SA40_RS04405 PF13244 Domain of unknown function (DUF4040) SA40_RS04405 PF00361 Proton-conducting membrane transporter SA40_RS04405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SA40_RS04415 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SA40_RS04420 PF00575 S1 RNA binding domain SA40_RS04425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SA40_RS04430 PF00202 Aminotransferase class-III SA40_RS04435 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SA40_RS04435 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SA40_RS04445 PF03009 Glycerophosphoryl diester phosphodiesterase family SA40_RS04450 PF14698 Argininosuccinate lyase C-terminal SA40_RS04450 PF00206 Lyase SA40_RS04455 PF00764 Arginosuccinate synthase SA40_RS04460 PF00342 Phosphoglucose isomerase SA40_RS04465 PF09335 SNARE associated Golgi protein SA40_RS04470 PF10502 Signal peptidase, peptidase S26 SA40_RS04475 PF10502 Signal peptidase, peptidase S26 SA40_RS04480 PF13361 UvrD-like helicase C-terminal domain SA40_RS04480 PF12705 PD-(D/E)XK nuclease superfamily SA40_RS04485 PF12705 PD-(D/E)XK nuclease superfamily SA40_RS04485 PF13361 UvrD-like helicase C-terminal domain SA40_RS04485 PF00580 UvrD/REP helicase N-terminal domain SA40_RS04490 PF01557 Fumarylacetoacetate (FAA) hydrolase family SA40_RS04495 PF07457 Protein of unknown function (DUF1516) SA40_RS04500 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS04500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SA40_RS04510 PF01883 Iron-sulfur cluster assembly protein SA40_RS04515 PF01757 Acyltransferase family SA40_RS04520 PF17871 AAA lid domain SA40_RS04520 PF00004 ATPase family associated with various cellular activities (AAA) SA40_RS04520 PF07724 AAA domain (Cdc48 subfamily) SA40_RS04520 PF10431 C-terminal, D2-small domain, of ClpB protein SA40_RS04520 PF02861 Clp amino terminal domain, pathogenicity island component SA40_RS04530 PF08502 LeuA allosteric (dimerisation) domain SA40_RS04530 PF00682 HMGL-like SA40_RS04550 PF01161 Phosphatidylethanolamine-binding protein SA40_RS04555 PF03642 MAP domain SA40_RS04565 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SA40_RS04565 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SA40_RS04570 PF00109 Beta-ketoacyl synthase, N-terminal domain SA40_RS04570 PF02801 Beta-ketoacyl synthase, C-terminal domain SA40_RS04580 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS04585 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS04585 PF12911 N-terminal TM domain of oligopeptide transport permease C SA40_RS04590 PF00005 ABC transporter SA40_RS04590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SA40_RS04595 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SA40_RS04595 PF00005 ABC transporter SA40_RS04600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SA40_RS04605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SA40_RS04610 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SA40_RS04610 PF00005 ABC transporter SA40_RS04615 PF00005 ABC transporter SA40_RS04615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SA40_RS04620 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS04625 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS04625 PF12911 N-terminal TM domain of oligopeptide transport permease C SA40_RS04635 PF00579 tRNA synthetases class I (W and Y) SA40_RS04640 PF03960 ArsC family SA40_RS04645 PF05389 Negative regulator of genetic competence (MecA) SA40_RS04655 PF08439 Oligopeptidase F SA40_RS04655 PF01432 Peptidase family M3 SA40_RS04665 PF01152 Bacterial-like globin SA40_RS04680 PF04607 Region found in RelA / SpoT proteins SA40_RS04685 PF01513 ATP-NAD kinase SA40_RS04690 PF00849 RNA pseudouridylate synthase SA40_RS04695 PF03448 MgtE intracellular N domain SA40_RS04695 PF00571 CBS domain SA40_RS04695 PF01769 Divalent cation transporter SA40_RS04700 PF02080 TrkA-C domain SA40_RS04700 PF02254 TrkA-N domain SA40_RS04700 PF00999 Sodium/hydrogen exchanger family SA40_RS04710 PF01594 AI-2E family transporter SA40_RS04715 PF01235 Sodium:alanine symporter family SA40_RS04740 PF07690 Major Facilitator Superfamily SA40_RS04745 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase SA40_RS04745 PF04101 Glycosyltransferase family 28 C-terminal domain SA40_RS04750 PF01225 Mur ligase family, catalytic domain SA40_RS04750 PF02875 Mur ligase family, glutamate ligase domain SA40_RS04750 PF08245 Mur ligase middle domain SA40_RS04760 PF03144 Elongation factor Tu domain 2 SA40_RS04760 PF00009 Elongation factor Tu GTP binding domain SA40_RS04760 PF16658 Class II release factor RF3, C-terminal domain SA40_RS04765 PF03741 Integral membrane protein TerC family SA40_RS04770 PF13180 PDZ domain SA40_RS04775 PF02386 Cation transport protein SA40_RS04780 PF00149 Calcineurin-like phosphoesterase SA40_RS04780 PF02872 5'-nucleotidase, C-terminal domain SA40_RS04795 PF06338 ComK protein SA40_RS04805 PF03099 Biotin/lipoate A/B protein ligase family SA40_RS04805 PF10437 Bacterial lipoate protein ligase C-terminus SA40_RS04810 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) SA40_RS04850 PF00005 ABC transporter SA40_RS04850 PF02687 FtsX-like permease family SA40_RS04850 PF12704 MacB-like periplasmic core domain SA40_RS04865 PF01497 Periplasmic binding protein SA40_RS04875 PF05154 TM2 domain SA40_RS04880 PF00583 Acetyltransferase (GNAT) family SA40_RS04885 PF01040 UbiA prenyltransferase family SA40_RS04890 PF00425 chorismate binding enzyme SA40_RS04895 PF16582 Middle domain of thiamine pyrophosphate SA40_RS04895 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SA40_RS04895 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SA40_RS04900 PF00561 alpha/beta hydrolase fold SA40_RS04905 PF00378 Enoyl-CoA hydratase/isomerase SA40_RS04910 PF09023 Staphostatin B SA40_RS04915 PF14731 Staphopain proregion SA40_RS04915 PF05543 Staphopain peptidase C47 SA40_RS04925 PF00155 Aminotransferase class I and II SA40_RS04930 PF01757 Acyltransferase family SA40_RS04945 PF13457 GW (Gly-Tryp) dipeptide domain SA40_RS04945 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SA40_RS04945 PF01510 N-acetylmuramoyl-L-alanine amidase SA40_RS04950 PF13673 Acetyltransferase (GNAT) domain SA40_RS04955 PF10804 Protein of unknown function (DUF2538) SA40_RS04960 PF03816 Cell envelope-related transcriptional attenuator domain SA40_RS04965 PF00144 Beta-lactamase SA40_RS04970 PF03626 Prokaryotic Cytochrome C oxidase subunit IV SA40_RS04975 PF00510 Cytochrome c oxidase subunit III SA40_RS04980 PF00115 Cytochrome C and Quinol oxidase polypeptide I SA40_RS04985 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SA40_RS04985 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SA40_RS05000 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SA40_RS05000 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SA40_RS05005 PF00731 AIR carboxylase SA40_RS05010 PF02222 ATP-grasp domain SA40_RS05010 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain SA40_RS05010 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SA40_RS05015 PF01259 SAICAR synthetase SA40_RS05020 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SA40_RS05030 PF02769 AIR synthase related protein, C-terminal domain SA40_RS05030 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain SA40_RS05030 PF00586 AIR synthase related protein, N-terminal domain SA40_RS05035 PF13537 Glutamine amidotransferase domain SA40_RS05035 PF00156 Phosphoribosyl transferase domain SA40_RS05040 PF02769 AIR synthase related protein, C-terminal domain SA40_RS05040 PF00586 AIR synthase related protein, N-terminal domain SA40_RS05045 PF00551 Formyl transferase SA40_RS05050 PF02142 MGS-like domain SA40_RS05050 PF01808 AICARFT/IMPCHase bienzyme SA40_RS05055 PF02843 Phosphoribosylglycinamide synthetase, C domain SA40_RS05055 PF02844 Phosphoribosylglycinamide synthetase, N domain SA40_RS05055 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SA40_RS05060 PF02361 Cobalt transport protein SA40_RS05065 PF00005 ABC transporter SA40_RS05070 PF09819 ABC-type cobalt transport system, permease component SA40_RS05090 PF10672 S-adenosylmethionine-dependent methyltransferase SA40_RS05090 PF17785 PUA-like domain SA40_RS05100 PF00381 PTS HPr component phosphorylation site SA40_RS05105 PF00391 PEP-utilising enzyme, mobile domain SA40_RS05105 PF02896 PEP-utilising enzyme, TIM barrel domain SA40_RS05105 PF05524 PEP-utilising enzyme, N-terminal SA40_RS05110 PF00462 Glutaredoxin SA40_RS05115 PF01654 Cytochrome bd terminal oxidase subunit I SA40_RS05120 PF02322 Cytochrome bd terminal oxidase subunit II SA40_RS05125 PF02254 TrkA-N domain SA40_RS05125 PF02080 TrkA-C domain SA40_RS05130 PF00753 Metallo-beta-lactamase superfamily SA40_RS05130 PF17770 Ribonuclease J C-terminal domain SA40_RS05130 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SA40_RS05135 PF07288 Protein of unknown function (DUF1447) SA40_RS05145 PF01327 Polypeptide deformylase SA40_RS05155 PF00676 Dehydrogenase E1 component SA40_RS05160 PF02780 Transketolase, C-terminal domain SA40_RS05160 PF02779 Transketolase, pyrimidine binding domain SA40_RS05165 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SA40_RS05165 PF02817 e3 binding domain SA40_RS05165 PF00364 Biotin-requiring enzyme SA40_RS05170 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS05170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SA40_RS05175 PF05256 Uncharacterised protein family (UPF0223) SA40_RS05185 PF08402 TOBE domain SA40_RS05185 PF00005 ABC transporter SA40_RS05190 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS05195 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS05200 PF13416 Bacterial extracellular solute-binding protein SA40_RS05215 PF01566 Natural resistance-associated macrophage protein SA40_RS05220 PF06335 Protein of unknown function (DUF1054) SA40_RS05225 PF00459 Inositol monophosphatase family SA40_RS05235 PF14492 Elongation Factor G, domain II SA40_RS05235 PF00679 Elongation factor G C-terminus SA40_RS05235 PF00009 Elongation factor Tu GTP binding domain SA40_RS05235 PF03144 Elongation factor Tu domain 2 SA40_RS05250 PF07408 Protein of unknown function (DUF1507) SA40_RS05255 PF01098 Cell cycle protein SA40_RS05260 PF00364 Biotin-requiring enzyme SA40_RS05260 PF02785 Biotin carboxylase C-terminal domain SA40_RS05260 PF00289 Biotin carboxylase, N-terminal domain SA40_RS05260 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SA40_RS05260 PF00682 HMGL-like SA40_RS05260 PF02436 Conserved carboxylase domain SA40_RS05265 PF02628 Cytochrome oxidase assembly protein SA40_RS05270 PF01040 UbiA prenyltransferase family SA40_RS05290 PF06133 Control of competence regulator ComK, YlbF/YmcA SA40_RS05295 PF03009 Glycerophosphoryl diester phosphodiesterase family SA40_RS05300 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) SA40_RS05315 PF01467 Cytidylyltransferase-like SA40_RS05320 PF05636 HIGH Nucleotidyl Transferase SA40_RS05335 PF01783 Ribosomal L32p protein family SA40_RS05340 PF00746 LPXTG cell wall anchor motif SA40_RS05340 PF04650 YSIRK type signal peptide SA40_RS05340 PF05031 Iron Transport-associated domain SA40_RS05345 PF05031 Iron Transport-associated domain SA40_RS05345 PF00746 LPXTG cell wall anchor motif SA40_RS05350 PF05031 Iron Transport-associated domain SA40_RS05360 PF01497 Periplasmic binding protein SA40_RS05365 PF01032 FecCD transport family SA40_RS05370 PF04203 Sortase domain SA40_RS05375 PF03992 Antibiotic biosynthesis monooxygenase SA40_RS05385 PF00588 SpoU rRNA Methylase family SA40_RS05385 PF08032 RNA 2'-O ribose methyltransferase substrate binding SA40_RS05390 PF01409 tRNA synthetases class II core domain (F) SA40_RS05390 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SA40_RS05395 PF03483 B3/4 domain SA40_RS05395 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain SA40_RS05395 PF03147 Ferredoxin-fold anticodon binding domain SA40_RS05395 PF03484 tRNA synthetase B5 domain SA40_RS05395 PF01588 Putative tRNA binding domain SA40_RS05400 PF11858 Domain of unknown function (DUF3378) SA40_RS05400 PF01351 Ribonuclease HII SA40_RS05405 PF05164 Cell division protein ZapA SA40_RS05415 PF14791 DNA polymerase beta thumb SA40_RS05415 PF02811 PHP domain SA40_RS05415 PF14716 Helix-hairpin-helix domain SA40_RS05420 PF01713 Smr domain SA40_RS05420 PF00488 MutS domain V SA40_RS05425 PF00085 Thioredoxin SA40_RS05435 PF01541 GIY-YIG catalytic domain SA40_RS05435 PF02151 UvrB/uvrC motif SA40_RS05435 PF08459 UvrC Helix-hairpin-helix N-terminal SA40_RS05440 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SA40_RS05445 PF02910 Fumarate reductase flavoprotein C-term SA40_RS05445 PF00890 FAD binding domain SA40_RS05450 PF13183 4Fe-4S dicluster domain SA40_RS05450 PF13085 2Fe-2S iron-sulfur cluster binding domain SA40_RS05455 PF01177 Asp/Glu/Hydantoin racemase SA40_RS05460 PF01725 Ham1 family SA40_RS05465 PF12850 Calcineurin-like phosphoesterase superfamily domain SA40_RS05485 PF16104 Formyl peptide receptor-like 1 inhibitory protein SA40_RS05495 PF12199 Extracellular fibrinogen binding protein C terminal SA40_RS05530 PF07968 Leukocidin/Hemolysin toxin family SA40_RS05545 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS05550 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS05555 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS05560 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SA40_RS05560 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SA40_RS05565 PF00696 Amino acid kinase family SA40_RS05570 PF03606 C4-dicarboxylate anaerobic carrier SA40_RS05595 PF05480 Staphylococcus haemolytic protein SA40_RS05600 PF05480 Staphylococcus haemolytic protein SA40_RS05605 PF13419 Haloacid dehalogenase-like hydrolase SA40_RS05615 PF10079 Bacillithiol biosynthesis BshC SA40_RS05620 PF02381 MraZ protein, putative antitoxin-like SA40_RS05625 PF01795 MraW methylase family SA40_RS05630 PF04977 Septum formation initiator SA40_RS05635 PF00905 Penicillin binding protein transpeptidase domain SA40_RS05635 PF03717 Penicillin-binding Protein dimerisation domain SA40_RS05635 PF03793 PASTA domain SA40_RS05640 PF00953 Glycosyl transferase family 4 SA40_RS05645 PF08245 Mur ligase middle domain SA40_RS05645 PF02875 Mur ligase family, glutamate ligase domain SA40_RS05650 PF03799 Cell division protein FtsQ SA40_RS05650 PF08478 POTRA domain, FtsQ-type SA40_RS05655 PF02491 SHS2 domain inserted in FTSA SA40_RS05660 PF12327 FtsZ family, C-terminal domain SA40_RS05660 PF00091 Tubulin/FtsZ family, GTPase domain SA40_RS05665 PF02578 Multi-copper polyphenol oxidoreductase laccase SA40_RS05670 PF01168 Alanine racemase, N-terminal domain SA40_RS05675 PF04472 Cell division protein SepF SA40_RS05680 PF02325 YGGT family SA40_RS05685 PF17774 Putative RNA-binding domain in YlmH SA40_RS05685 PF01479 S4 domain SA40_RS05690 PF05103 DivIVA protein SA40_RS05695 PF06827 Zinc finger found in FPG and IleRS SA40_RS05695 PF00133 tRNA synthetases class I (I, L, M and V) SA40_RS05695 PF08264 Anticodon-binding domain of tRNA SA40_RS05700 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SA40_RS05715 PF01252 Signal peptidase (SPase) II SA40_RS05720 PF00849 RNA pseudouridylate synthase SA40_RS05720 PF01479 S4 domain SA40_RS05725 PF00156 Phosphoribosyl transferase domain SA40_RS05730 PF00860 Permease family SA40_RS05735 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SA40_RS05735 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SA40_RS05740 PF01979 Amidohydrolase family SA40_RS05745 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SA40_RS05745 PF00117 Glutamine amidotransferase class-I SA40_RS05750 PF02142 MGS-like domain SA40_RS05750 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SA40_RS05750 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SA40_RS05755 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SA40_RS05760 PF00156 Phosphoribosyl transferase domain SA40_RS05775 PF05670 NFACT protein RNA binding domain SA40_RS05780 PF00625 Guanylate kinase SA40_RS05785 PF01192 RNA polymerase Rpb6 SA40_RS05790 PF04127 DNA / pantothenate metabolism flavoprotein SA40_RS05790 PF02441 Flavoprotein SA40_RS05795 PF17764 3′ DNA-binding domain (3′BD) SA40_RS05795 PF18319 PriA DNA helicase Cys-rich region (CRR) domain SA40_RS05795 PF18074 Primosomal protein N C-terminal domain SA40_RS05795 PF04851 Type III restriction enzyme, res subunit SA40_RS05795 PF00271 Helicase conserved C-terminal domain SA40_RS05805 PF05154 TM2 domain SA40_RS05810 PF01327 Polypeptide deformylase SA40_RS05815 PF02911 Formyl transferase, C-terminal domain SA40_RS05815 PF00551 Formyl transferase SA40_RS05820 PF01029 NusB family SA40_RS05820 PF01189 16S rRNA methyltransferase RsmB/F SA40_RS05825 PF04055 Radical SAM superfamily SA40_RS05835 PF00069 Protein kinase domain SA40_RS05835 PF03793 PASTA domain SA40_RS05840 PF16745 RsgA N-terminal domain SA40_RS05840 PF03193 RsgA GTPase SA40_RS05845 PF00834 Ribulose-phosphate 3 epimerase family SA40_RS05855 PF00830 Ribosomal L28 family SA40_RS05860 PF03780 Asp23 family, cell envelope-related function SA40_RS05865 PF13684 Dihydroxyacetone kinase family SA40_RS05865 PF02734 DAK2 domain SA40_RS05870 PF00270 DEAD/DEAH box helicase SA40_RS05870 PF00271 Helicase conserved C-terminal domain SA40_RS05870 PF17191 RecG wedge domain SA40_RS05875 PF03061 Thioesterase superfamily SA40_RS05880 PF02504 Fatty acid synthesis protein SA40_RS05885 PF00698 Acyl transferase domain SA40_RS05900 PF00550 Phosphopantetheine attachment site SA40_RS05905 PF00035 Double-stranded RNA binding motif SA40_RS05905 PF14622 Ribonuclease-III-like SA40_RS05910 PF06470 SMC proteins Flexible Hinge Domain SA40_RS05910 PF02463 RecF/RecN/SMC N terminal domain SA40_RS05915 PF02881 SRP54-type protein, helical bundle domain SA40_RS05915 PF00448 SRP54-type protein, GTPase domain SA40_RS05920 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SA40_RS05925 PF02978 Signal peptide binding domain SA40_RS05925 PF02881 SRP54-type protein, helical bundle domain SA40_RS05925 PF00448 SRP54-type protein, GTPase domain SA40_RS05930 PF00886 Ribosomal protein S16 SA40_RS05935 PF05239 PRC-barrel domain SA40_RS05935 PF01782 RimM N-terminal domain SA40_RS05940 PF01746 tRNA (Guanine-1)-methyltransferase SA40_RS05945 PF01245 Ribosomal protein L19 SA40_RS05960 PF01926 50S ribosome-binding GTPase SA40_RS05965 PF01351 Ribonuclease HII SA40_RS05970 PF00549 CoA-ligase SA40_RS05970 PF08442 ATP-grasp domain SA40_RS05975 PF02629 CoA binding domain SA40_RS05975 PF00549 CoA-ligase SA40_RS05980 PF05257 CHAP domain SA40_RS05980 PF01476 LysM domain SA40_RS05985 PF02388 FemAB family SA40_RS05990 PF02481 DNA recombination-mediator protein A SA40_RS05995 PF01131 DNA topoisomerase SA40_RS05995 PF01396 Topoisomerase DNA binding C4 zinc finger SA40_RS05995 PF01751 Toprim domain SA40_RS06000 PF01134 Glucose inhibited division protein A SA40_RS06005 PF02899 Phage integrase, N-terminal SAM-like domain SA40_RS06005 PF00589 Phage integrase family SA40_RS06010 PF00227 Proteasome subunit SA40_RS06015 PF10431 C-terminal, D2-small domain, of ClpB protein SA40_RS06015 PF00004 ATPase family associated with various cellular activities (AAA) SA40_RS06015 PF07724 AAA domain (Cdc48 subfamily) SA40_RS06020 PF08222 CodY helix-turn-helix domain SA40_RS06020 PF06018 CodY GAF-like domain SA40_RS06030 PF00318 Ribosomal protein S2 SA40_RS06040 PF00889 Elongation factor TS SA40_RS06045 PF00696 Amino acid kinase family SA40_RS06050 PF01765 Ribosome recycling factor SA40_RS06055 PF01255 Putative undecaprenyl diphosphate synthase SA40_RS06065 PF02163 Peptidase family M50 SA40_RS06065 PF13180 PDZ domain SA40_RS06070 PF03129 Anticodon binding domain SA40_RS06070 PF04073 Aminoacyl-tRNA editing domain SA40_RS06070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SA40_RS06075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SA40_RS06075 PF00929 Exonuclease SA40_RS06075 PF14579 Helix-hairpin-helix motif SA40_RS06075 PF07733 Bacterial DNA polymerase III alpha NTPase domain SA40_RS06075 PF02811 PHP domain SA40_RS06075 PF14480 DNA polymerase III polC-type N-terminus I SA40_RS06075 PF11490 DNA polymerase III polC-type N-terminus II SA40_RS06080 PF17384 RimP C-terminal SH3 domain SA40_RS06080 PF02576 RimP N-terminal domain SA40_RS06085 PF08529 NusA N-terminal domain SA40_RS06085 PF00575 S1 RNA binding domain SA40_RS06085 PF13184 NusA-like KH domain SA40_RS06090 PF04296 Protein of unknown function (DUF448) SA40_RS06095 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SA40_RS06100 PF04760 Translation initiation factor IF-2, N-terminal region SA40_RS06100 PF11987 Translation-initiation factor 2 SA40_RS06100 PF00009 Elongation factor Tu GTP binding domain SA40_RS06105 PF02033 Ribosome-binding factor A SA40_RS06110 PF01509 TruB family pseudouridylate synthase (N terminal domain) SA40_RS06110 PF16198 tRNA pseudouridylate synthase B C-terminal domain SA40_RS06115 PF06574 FAD synthetase SA40_RS06115 PF01687 Riboflavin kinase SA40_RS06120 PF00312 Ribosomal protein S15 SA40_RS06125 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SA40_RS06125 PF00013 KH domain SA40_RS06125 PF01138 3' exoribonuclease family, domain 1 SA40_RS06125 PF03725 3' exoribonuclease family, domain 2 SA40_RS06125 PF00575 S1 RNA binding domain SA40_RS06130 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain SA40_RS06130 PF00753 Metallo-beta-lactamase superfamily SA40_RS06130 PF17770 Ribonuclease J C-terminal domain SA40_RS06135 PF17854 FtsK alpha domain SA40_RS06135 PF09397 Ftsk gamma domain SA40_RS06135 PF01580 FtsK/SpoIIIE family SA40_RS06140 PF00392 Bacterial regulatory proteins, gntR family SA40_RS06140 PF07702 UTRA domain SA40_RS06145 PF05193 Peptidase M16 inactive domain SA40_RS06150 PF00675 Insulinase (Peptidase family M16) SA40_RS06150 PF05193 Peptidase M16 inactive domain SA40_RS06160 PF11868 Protein of unknown function (DUF3388) SA40_RS06170 PF01066 CDP-alcohol phosphatidyltransferase SA40_RS06180 PF00994 Probable molybdopterin binding domain SA40_RS06180 PF02464 Competence-damaged protein SA40_RS06180 PF18146 Damage-inducible protein CinA KH domain SA40_RS06185 PF00154 recA bacterial DNA recombination protein SA40_RS06190 PF00013 KH domain SA40_RS06190 PF12072 Domain of unknown function (DUF3552) SA40_RS06190 PF01966 HD domain SA40_RS06200 PF13277 YmdB-like protein SA40_RS06205 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II SA40_RS06205 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SA40_RS06205 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SA40_RS06210 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SA40_RS06215 PF01910 Thiamine-binding protein SA40_RS06220 PF01938 TRAM domain SA40_RS06220 PF04055 Radical SAM superfamily SA40_RS06220 PF00919 Uncharacterized protein family UPF0004 SA40_RS06235 PF05190 MutS family domain IV SA40_RS06235 PF01624 MutS domain I SA40_RS06235 PF00488 MutS domain V SA40_RS06235 PF05192 MutS domain III SA40_RS06235 PF05188 MutS domain II SA40_RS06240 PF01119 DNA mismatch repair protein, C-terminal domain SA40_RS06240 PF08676 MutL C terminal dimerisation domain SA40_RS06245 PF04309 Glycerol-3-phosphate responsive antiterminator SA40_RS06250 PF00230 Major intrinsic protein SA40_RS06255 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SA40_RS06255 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SA40_RS06260 PF16901 C-terminal domain of alpha-glycerophosphate oxidase SA40_RS06260 PF01266 FAD dependent oxidoreductase SA40_RS06275 PF17209 Hfq protein SA40_RS06280 PF00255 Glutathione peroxidase SA40_RS06285 PF16360 GTP-binding GTPase Middle Region SA40_RS06285 PF13167 GTP-binding GTPase N-terminal SA40_RS06285 PF01926 50S ribosome-binding GTPase SA40_RS06290 PF06838 Methionine gamma-lyase SA40_RS06295 PF13411 MerR HTH family regulatory protein SA40_RS06300 PF03951 Glutamine synthetase, beta-Grasp domain SA40_RS06300 PF00120 Glutamine synthetase, catalytic domain SA40_RS06415 PF13091 PLD-like domain SA40_RS06415 PF13396 Phospholipase_D-nuclease N-terminal SA40_RS06425 PF00565 Staphylococcal nuclease homologue SA40_RS06440 PF13840 ACT domain SA40_RS06440 PF00696 Amino acid kinase family SA40_RS06445 PF01842 ACT domain SA40_RS06445 PF03447 Homoserine dehydrogenase, NAD binding domain SA40_RS06445 PF00742 Homoserine dehydrogenase SA40_RS06450 PF00291 Pyridoxal-phosphate dependent enzyme SA40_RS06455 PF08544 GHMP kinases C terminal SA40_RS06455 PF00288 GHMP kinases N terminal domain SA40_RS06475 PF00324 Amino acid permease SA40_RS06480 PF06628 Catalase-related immune-responsive SA40_RS06480 PF00199 Catalase SA40_RS06485 PF00471 Ribosomal protein L33 SA40_RS06490 PF00253 Ribosomal protein S14p/S29e SA40_RS06495 PF00478 IMP dehydrogenase / GMP reductase domain SA40_RS06505 PF00188 Cysteine-rich secretory protein family SA40_RS06510 PF00717 Peptidase S24-like SA40_RS06510 PF01726 LexA DNA binding domain SA40_RS06520 PF05979 Bacterial protein of unknown function (DUF896) SA40_RS06525 PF02779 Transketolase, pyrimidine binding domain SA40_RS06525 PF00456 Transketolase, thiamine diphosphate binding domain SA40_RS06525 PF02780 Transketolase, C-terminal domain SA40_RS06530 PF03672 Uncharacterised protein family (UPF0154) SA40_RS06540 PF07301 Protein of unknown function (DUF1453) SA40_RS06545 PF00149 Calcineurin-like phosphoesterase SA40_RS06545 PF12320 Type 5 capsule protein repressor C-terminal domain SA40_RS06550 PF13476 AAA domain SA40_RS06555 PF01741 Large-conductance mechanosensitive channel, MscL SA40_RS06560 PF02028 BCCT, betaine/carnitine/choline family transporter SA40_RS06565 PF00330 Aconitase family (aconitate hydratase) SA40_RS06565 PF00694 Aconitase C-terminal domain SA40_RS06570 PF03061 Thioesterase superfamily SA40_RS06580 PF02660 Glycerol-3-phosphate acyltransferase SA40_RS06585 PF00986 DNA gyrase B subunit, carboxyl terminus SA40_RS06585 PF01751 Toprim domain SA40_RS06585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS06585 PF00204 DNA gyrase B SA40_RS06590 PF00521 DNA gyrase/topoisomerase IV, subunit A SA40_RS06590 PF03989 DNA gyrase C-terminal domain, beta-propeller SA40_RS06600 PF01235 Sodium:alanine symporter family SA40_RS06605 PF00874 PRD domain SA40_RS06605 PF03123 CAT RNA binding domain SA40_RS06615 PF01594 AI-2E family transporter SA40_RS06620 PF03706 Lysylphosphatidylglycerol synthase TM region SA40_RS06620 PF09924 Uncharacterised conserved protein (DUF2156) SA40_RS06625 PF01625 Peptide methionine sulfoxide reductase SA40_RS06630 PF03816 Cell envelope-related transcriptional attenuator domain SA40_RS06635 PF01361 Tautomerase enzyme SA40_RS06640 PF00817 impB/mucB/samB family SA40_RS06640 PF11798 IMS family HHH motif SA40_RS06640 PF11799 impB/mucB/samB family C-terminal domain SA40_RS06645 PF02153 Prephenate dehydrogenase SA40_RS06650 PF05343 M42 glutamyl aminopeptidase SA40_RS06655 PF00425 chorismate binding enzyme SA40_RS06655 PF04715 Anthranilate synthase component I, N terminal region SA40_RS06660 PF00117 Glutamine amidotransferase class-I SA40_RS06665 PF00591 Glycosyl transferase family, a/b domain SA40_RS06670 PF00218 Indole-3-glycerol phosphate synthase SA40_RS06680 PF00291 Pyridoxal-phosphate dependent enzyme SA40_RS06685 PF00290 Tryptophan synthase alpha chain SA40_RS06690 PF02388 FemAB family SA40_RS06695 PF02388 FemAB family SA40_RS06710 PF00005 ABC transporter SA40_RS06715 PF00005 ABC transporter SA40_RS06720 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS06725 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS06740 PF08439 Oligopeptidase F SA40_RS06740 PF01432 Peptidase family M3 SA40_RS06745 PF01895 PhoU domain SA40_RS06750 PF00005 ABC transporter SA40_RS06755 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS06760 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS06765 PF12849 PBP superfamily domain SA40_RS06770 PF13509 S1 domain SA40_RS06770 PF17783 CvfB-like winged helix domain SA40_RS06775 PF00005 ABC transporter SA40_RS06775 PF12848 ABC transporter SA40_RS06780 PF00696 Amino acid kinase family SA40_RS06780 PF01842 ACT domain SA40_RS06780 PF13840 ACT domain SA40_RS06785 PF01118 Semialdehyde dehydrogenase, NAD binding domain SA40_RS06785 PF02774 Semialdehyde dehydrogenase, dimerisation domain SA40_RS06790 PF00701 Dihydrodipicolinate synthetase family SA40_RS06795 PF05173 Dihydrodipicolinate reductase, C-terminus SA40_RS06795 PF01113 Dihydrodipicolinate reductase, N-terminus SA40_RS06800 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SA40_RS06800 PF14602 Hexapeptide repeat of succinyl-transferase SA40_RS06800 PF00132 Bacterial transferase hexapeptide (six repeats) SA40_RS06805 PF01546 Peptidase family M20/M25/M40 SA40_RS06805 PF07687 Peptidase dimerisation domain SA40_RS06810 PF00842 Alanine racemase, C-terminal domain SA40_RS06810 PF01168 Alanine racemase, N-terminal domain SA40_RS06815 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SA40_RS06815 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SA40_RS06820 PF04299 Putative FMN-binding domain SA40_RS06830 PF00313 'Cold-shock' DNA-binding domain SA40_RS06845 PF00708 Acylphosphatase SA40_RS06855 PF05816 Toxic anion resistance protein (TelA) SA40_RS06860 PF05525 Branched-chain amino acid transport protein SA40_RS06865 PF00092 von Willebrand factor type A domain SA40_RS06870 PF07728 AAA domain (dynein-related subfamily) SA40_RS06870 PF08406 CbbQ/NirQ/NorQ C-terminal SA40_RS06885 PF00364 Biotin-requiring enzyme SA40_RS06885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SA40_RS06885 PF02817 e3 binding domain SA40_RS06890 PF00676 Dehydrogenase E1 component SA40_RS06890 PF16870 2-oxoglutarate dehydrogenase C-terminal SA40_RS06890 PF02779 Transketolase, pyrimidine binding domain SA40_RS06895 PF18719 ArlS sensor domain SA40_RS06895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS06895 PF00512 His Kinase A (phospho-acceptor) domain SA40_RS06900 PF00486 Transcriptional regulatory protein, C terminal SA40_RS06900 PF00072 Response regulator receiver domain SA40_RS06905 PF01569 PAP2 superfamily SA40_RS06910 PF04101 Glycosyltransferase family 28 C-terminal domain SA40_RS06910 PF03033 Glycosyltransferase family 28 N-terminal domain SA40_RS06920 PF01471 Putative peptidoglycan binding domain SA40_RS06920 PF03572 Peptidase family S41 SA40_RS06920 PF13180 PDZ domain SA40_RS06930 PF06855 YozE SAM-like fold SA40_RS06935 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SA40_RS06940 PF01641 SelR domain SA40_RS06945 PF01625 Peptide methionine sulfoxide reductase SA40_RS06950 PF02645 Uncharacterised protein, DegV family COG1307 SA40_RS06955 PF00186 Dihydrofolate reductase SA40_RS06960 PF00303 Thymidylate synthase SA40_RS06965 PF06491 Disulphide isomerase SA40_RS06970 PF08712 Scaffold protein Nfu/NifU N terminal SA40_RS06970 PF13769 Virulence factor SA40_RS06975 PF08712 Scaffold protein Nfu/NifU N terminal SA40_RS06975 PF13769 Virulence factor SA40_RS06980 PF10782 Zinc-finger SA40_RS06985 PF02592 Putative vitamin uptake transporter SA40_RS07005 PF07690 Major Facilitator Superfamily SA40_RS07010 PF13520 Amino acid permease SA40_RS07015 PF00291 Pyridoxal-phosphate dependent enzyme SA40_RS07020 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SA40_RS07020 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SA40_RS07025 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SA40_RS07025 PF01367 5'-3' exonuclease, C-terminal SAM fold SA40_RS07030 PF00350 Dynamin family SA40_RS07045 PF02926 THUMP domain SA40_RS07045 PF01170 Putative RNA methylase family UPF0020 SA40_RS07050 PF05103 DivIVA protein SA40_RS07055 PF06908 YspA SLOG family SA40_RS07070 PF03838 Recombination protein U SA40_RS07075 PF00912 Transglycosylase SA40_RS07075 PF00905 Penicillin binding protein transpeptidase domain SA40_RS07085 PF00730 HhH-GPD superfamily base excision DNA repair protein SA40_RS07085 PF00633 Helix-hairpin-helix motif SA40_RS07085 PF10576 Iron-sulfur binding domain of endonuclease III SA40_RS07090 PF07261 Replication initiation and membrane attachment SA40_RS07095 PF01336 OB-fold nucleic acid binding domain SA40_RS07095 PF00152 tRNA synthetases class II (D, K and N) SA40_RS07100 PF13307 Helicase C-terminal domain SA40_RS07100 PF00929 Exonuclease SA40_RS07105 PF03099 Biotin/lipoate A/B protein ligase family SA40_RS07105 PF08279 HTH domain SA40_RS07105 PF02237 Biotin protein ligase C terminal domain SA40_RS07110 PF12627 Probable RNA and SrmB- binding site of polymerase A SA40_RS07110 PF01743 Poly A polymerase head domain SA40_RS07110 PF13735 tRNA nucleotidyltransferase domain 2 putative SA40_RS07115 PF00534 Glycosyl transferases group 1 SA40_RS07115 PF13439 Glycosyltransferase Family 4 SA40_RS07120 PF03819 MazG nucleotide pyrophosphohydrolase domain SA40_RS07125 PF04298 Putative neutral zinc metallopeptidase SA40_RS07135 PF08858 IDEAL domain SA40_RS07135 PF08864 UPF0302 domain SA40_RS07145 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SA40_RS07150 PF01761 3-dehydroquinate synthase SA40_RS07155 PF01264 Chorismate synthase SA40_RS07165 PF00334 Nucleoside diphosphate kinase SA40_RS07170 PF00348 Polyprenyl synthetase SA40_RS07175 PF01209 ubiE/COQ5 methyltransferase family SA40_RS07190 PF00216 Bacterial DNA-binding protein SA40_RS07195 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SA40_RS07195 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SA40_RS07200 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SA40_RS07200 PF01926 50S ribosome-binding GTPase SA40_RS07205 PF00575 S1 RNA binding domain SA40_RS07225 PF02224 Cytidylate kinase SA40_RS07230 PF17763 Glutaminase/Asparaginase C-terminal domain SA40_RS07230 PF00710 Asparaginase, N-terminal SA40_RS07245 PF01476 LysM domain SA40_RS07250 PF00271 Helicase conserved C-terminal domain SA40_RS07250 PF00270 DEAD/DEAH box helicase SA40_RS07265 PF12822 ECF transporter, substrate-specific component SA40_RS07295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS07295 PF18698 Histidine kinase sensor domain SA40_RS07295 PF00512 His Kinase A (phospho-acceptor) domain SA40_RS07295 PF00672 HAMP domain SA40_RS07300 PF00486 Transcriptional regulatory protein, C terminal SA40_RS07300 PF00072 Response regulator receiver domain SA40_RS07305 PF00849 RNA pseudouridylate synthase SA40_RS07305 PF01479 S4 domain SA40_RS07310 PF04079 Segregation and condensation complex subunit ScpB SA40_RS07315 PF02616 Segregation and condensation protein ScpA SA40_RS07325 PF02899 Phage integrase, N-terminal SAM-like domain SA40_RS07325 PF00589 Phage integrase family SA40_RS07330 PF01475 Ferric uptake regulator family SA40_RS07335 PF00293 NUDIX domain SA40_RS07340 PF00248 Aldo/keto reductase family SA40_RS07350 PF00106 short chain dehydrogenase SA40_RS07355 PF03807 NADP oxidoreductase coenzyme F420-dependent SA40_RS07355 PF14748 Pyrroline-5-carboxylate reductase dimerisation SA40_RS07360 PF12706 Beta-lactamase superfamily domain SA40_RS07365 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SA40_RS07365 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SA40_RS07375 PF00128 Alpha amylase, catalytic domain SA40_RS07375 PF16657 Maltogenic Amylase, C-terminal domain SA40_RS07380 PF00356 Bacterial regulatory proteins, lacI family SA40_RS07395 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SA40_RS07395 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SA40_RS07400 PF07687 Peptidase dimerisation domain SA40_RS07400 PF01546 Peptidase family M20/M25/M40 SA40_RS07410 PF11728 Putative aromatic acid exporter C-terminal domain SA40_RS07410 PF06081 Aromatic acid exporter family member 1 SA40_RS07415 PF06491 Disulphide isomerase SA40_RS07420 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SA40_RS07420 PF02817 e3 binding domain SA40_RS07420 PF00364 Biotin-requiring enzyme SA40_RS07425 PF02779 Transketolase, pyrimidine binding domain SA40_RS07425 PF02780 Transketolase, C-terminal domain SA40_RS07430 PF00676 Dehydrogenase E1 component SA40_RS07435 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SA40_RS07435 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS07440 PF13476 AAA domain SA40_RS07445 PF01316 Arginine repressor, DNA binding domain SA40_RS07445 PF02863 Arginine repressor, C-terminal domain SA40_RS07450 PF00348 Polyprenyl synthetase SA40_RS07455 PF02609 Exonuclease VII small subunit SA40_RS07460 PF02601 Exonuclease VII, large subunit SA40_RS07460 PF13742 OB-fold nucleic acid binding domain SA40_RS07465 PF01029 NusB family SA40_RS07470 PF03780 Asp23 family, cell envelope-related function SA40_RS07475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SA40_RS07475 PF00289 Biotin carboxylase, N-terminal domain SA40_RS07475 PF02785 Biotin carboxylase C-terminal domain SA40_RS07480 PF00364 Biotin-requiring enzyme SA40_RS07485 PF01132 Elongation factor P (EF-P) OB domain SA40_RS07485 PF09285 Elongation factor P, C-terminal SA40_RS07485 PF08207 Elongation factor P (EF-P) KOW-like domain SA40_RS07490 PF01321 Creatinase/Prolidase N-terminal domain SA40_RS07490 PF00557 Metallopeptidase family M24 SA40_RS07505 PF03099 Biotin/lipoate A/B protein ligase family SA40_RS07510 PF00581 Rhodanese-like domain SA40_RS07515 PF00266 Aminotransferase class-V SA40_RS07520 PF02347 Glycine cleavage system P-protein SA40_RS07525 PF01571 Aminomethyltransferase folate-binding domain SA40_RS07525 PF08669 Glycine cleavage T-protein C-terminal barrel domain SA40_RS07530 PF01202 Shikimate kinase SA40_RS07555 PF07963 Prokaryotic N-terminal methylation motif SA40_RS07560 PF00482 Type II secretion system (T2SS), protein F SA40_RS07565 PF00437 Type II/IV secretion system protein SA40_RS07570 PF00753 Metallo-beta-lactamase superfamily SA40_RS07575 PF01910 Thiamine-binding protein SA40_RS07580 PF00480 ROK family SA40_RS07585 PF06014 Bacterial protein of unknown function (DUF910) SA40_RS07595 PF01812 5-formyltetrahydrofolate cyclo-ligase family SA40_RS07600 PF00471 Ribosomal protein L33 SA40_RS07605 PF03717 Penicillin-binding Protein dimerisation domain SA40_RS07605 PF00905 Penicillin binding protein transpeptidase domain SA40_RS07610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SA40_RS07610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SA40_RS07615 PF01475 Ferric uptake regulator family SA40_RS07620 PF00950 ABC 3 transport family SA40_RS07625 PF00005 ABC transporter SA40_RS07630 PF01261 Xylose isomerase-like TIM barrel SA40_RS07635 PF00271 Helicase conserved C-terminal domain SA40_RS07635 PF00270 DEAD/DEAH box helicase SA40_RS07640 PF01784 NIF3 (NGG1p interacting factor 3) SA40_RS07645 PF04816 tRNA (adenine(22)-N(1))-methyltransferase SA40_RS07650 PF03979 Sigma-70 factor, region 1.1 SA40_RS07650 PF04545 Sigma-70, region 4 SA40_RS07650 PF04542 Sigma-70 region 2 SA40_RS07650 PF00140 Sigma-70 factor, region 1.2 SA40_RS07650 PF04539 Sigma-70 region 3 SA40_RS07655 PF00772 DnaB-like helicase N terminal domain SA40_RS07655 PF08275 DNA primase catalytic core, N-terminal domain SA40_RS07655 PF01807 CHC2 zinc finger SA40_RS07660 PF03618 Kinase/pyrophosphorylase SA40_RS07665 PF08279 HTH domain SA40_RS07665 PF00571 CBS domain SA40_RS07670 PF03129 Anticodon binding domain SA40_RS07670 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SA40_RS07675 PF02565 Recombination protein O C terminal SA40_RS07675 PF11967 Recombination protein O N terminal SA40_RS07680 PF07650 KH domain SA40_RS07680 PF01926 50S ribosome-binding GTPase SA40_RS07685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SA40_RS07690 PF01219 Prokaryotic diacylglycerol kinase SA40_RS07695 PF02130 Uncharacterized protein family UPF0054 SA40_RS07700 PF02562 PhoH-like protein SA40_RS07710 PF12127 SigmaW regulon antibacterial SA40_RS07715 PF01957 NfeD-like C-terminal, partner-binding SA40_RS07715 PF01972 Serine dehydrogenase proteinase SA40_RS07720 PF01165 Ribosomal protein S21 SA40_RS07725 PF04055 Radical SAM superfamily SA40_RS07725 PF01938 TRAM domain SA40_RS07725 PF00919 Uncharacterized protein family UPF0004 SA40_RS07730 PF04452 RNA methyltransferase SA40_RS07740 PF00684 DnaJ central domain SA40_RS07740 PF01556 DnaJ C terminal domain SA40_RS07740 PF00226 DnaJ domain SA40_RS07745 PF00012 Hsp70 protein SA40_RS07750 PF01025 GrpE SA40_RS07755 PF01628 HrcA protein C terminal domain SA40_RS07760 PF04055 Radical SAM superfamily SA40_RS07760 PF06969 HemN C-terminal domain SA40_RS07765 PF00009 Elongation factor Tu GTP binding domain SA40_RS07765 PF03144 Elongation factor Tu domain 2 SA40_RS07765 PF00679 Elongation factor G C-terminus SA40_RS07765 PF06421 GTP-binding protein LepA C-terminus SA40_RS07770 PF01649 Ribosomal protein S20 SA40_RS07775 PF06144 DNA polymerase III, delta subunit SA40_RS07780 PF03772 Competence protein SA40_RS07780 PF00753 Metallo-beta-lactamase superfamily SA40_RS07780 PF13567 Domain of unknown function (DUF4131) SA40_RS07785 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SA40_RS07795 PF13649 Methyltransferase domain SA40_RS07805 PF01966 HD domain SA40_RS07810 PF01467 Cytidylyltransferase-like SA40_RS07815 PF01985 CRS1 / YhbY (CRM) domain SA40_RS07820 PF01488 Shikimate / quinate 5-dehydrogenase SA40_RS07820 PF08501 Shikimate dehydrogenase substrate binding domain SA40_RS07820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain SA40_RS07825 PF01926 50S ribosome-binding GTPase SA40_RS07835 PF01048 Phosphorylase superfamily SA40_RS07850 PF01797 Transposase IS200 like SA40_RS07855 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SA40_RS07865 PF02661 Fic/DOC family SA40_RS07865 PF12728 Helix-turn-helix domain SA40_RS07870 PF01566 Natural resistance-associated macrophage protein SA40_RS07875 PF03746 LamB/YcsF family SA40_RS07880 PF02785 Biotin carboxylase C-terminal domain SA40_RS07880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SA40_RS07880 PF00289 Biotin carboxylase, N-terminal domain SA40_RS07885 PF00364 Biotin-requiring enzyme SA40_RS07890 PF02626 Carboxyltransferase domain, subdomain A and B SA40_RS07895 PF02682 Carboxyltransferase domain, subdomain C and D SA40_RS07900 PF03449 Transcription elongation factor, N-terminal SA40_RS07900 PF01272 Transcription elongation factor, GreA/GreB, C-term SA40_RS07905 PF00485 Phosphoribulokinase / Uridine kinase family SA40_RS07910 PF16325 Peptidase family U32 C-terminal domain SA40_RS07910 PF01136 Peptidase family U32 SA40_RS07915 PF01136 Peptidase family U32 SA40_RS07925 PF06949 Protein of unknown function (DUF1292) SA40_RS07930 PF03652 Holliday junction resolvase SA40_RS07935 PF06135 IreB regulatory phosphoprotein SA40_RS07940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SA40_RS07940 PF01411 tRNA synthetases class II (A) SA40_RS07940 PF02272 DHHA1 domain SA40_RS07945 PF14490 Helix-hairpin-helix containing domain SA40_RS07945 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain SA40_RS07945 PF13538 UvrD-like helicase C-terminal domain SA40_RS07960 PF00266 Aminotransferase class-V SA40_RS07965 PF00296 Luciferase-like monooxygenase SA40_RS07975 PF05532 CsbD-like SA40_RS07980 PF02082 Transcriptional regulator SA40_RS07985 PF16193 AAA C-terminal domain SA40_RS07985 PF05496 Holliday junction DNA helicase RuvB P-loop domain SA40_RS07985 PF12002 MgsA AAA+ ATPase C terminal SA40_RS07990 PF00899 ThiF family SA40_RS08000 PF01336 OB-fold nucleic acid binding domain SA40_RS08000 PF00152 tRNA synthetases class II (D, K and N) SA40_RS08000 PF02938 GAD domain SA40_RS08005 PF03129 Anticodon binding domain SA40_RS08005 PF13393 Histidyl-tRNA synthetase SA40_RS08010 PF08239 Bacterial SH3 domain SA40_RS08010 PF01520 N-acetylmuramoyl-L-alanine amidase SA40_RS08015 PF02580 D-Tyr-tRNA(Tyr) deacylase SA40_RS08020 PF04607 Region found in RelA / SpoT proteins SA40_RS08020 PF13291 ACT domain SA40_RS08020 PF02824 TGS domain SA40_RS08025 PF00156 Phosphoribosyl transferase domain SA40_RS08030 PF02272 DHHA1 domain SA40_RS08030 PF01368 DHH family SA40_RS08030 PF17768 RecJ OB domain SA40_RS08030 PF10141 Single-strand DNA-specific exonuclease, C terminal domain SA40_RS08035 PF02355 Protein export membrane protein SA40_RS08035 PF07549 SecD/SecF GG Motif SA40_RS08040 PF02699 Preprotein translocase subunit SA40_RS08045 PF01702 Queuine tRNA-ribosyltransferase SA40_RS08050 PF02547 Queuosine biosynthesis protein SA40_RS08055 PF05491 RuvB C-terminal winged helix domain SA40_RS08055 PF05496 Holliday junction DNA helicase RuvB P-loop domain SA40_RS08055 PF17864 RuvB AAA lid domain SA40_RS08060 PF01330 RuvA N terminal domain SA40_RS08060 PF07499 RuvA, C-terminal domain SA40_RS08070 PF01926 50S ribosome-binding GTPase SA40_RS08070 PF09269 Domain of unknown function (DUF1967) SA40_RS08070 PF01018 GTP1/OBG SA40_RS08075 PF01016 Ribosomal L27 protein SA40_RS08080 PF04327 Cysteine protease Prp SA40_RS08085 PF00829 Ribosomal prokaryotic L21 protein SA40_RS08115 PF04002 RadC-like JAB domain SA40_RS08120 PF01478 Type IV leader peptidase family SA40_RS08120 PF06750 Bacterial Peptidase A24 N-terminal domain SA40_RS08130 PF08245 Mur ligase middle domain SA40_RS08130 PF02875 Mur ligase family, glutamate ligase domain SA40_RS08135 PF10458 Valyl tRNA synthetase tRNA binding arm SA40_RS08135 PF08264 Anticodon-binding domain of tRNA SA40_RS08135 PF00133 tRNA synthetases class I (I, L, M and V) SA40_RS08140 PF03352 Methyladenine glycosylase SA40_RS08155 PF00202 Aminotransferase class-III SA40_RS08160 PF00490 Delta-aminolevulinic acid dehydratase SA40_RS08170 PF03900 Porphobilinogen deaminase, C-terminal domain SA40_RS08170 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SA40_RS08175 PF01578 Cytochrome C assembly protein SA40_RS08180 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SA40_RS08180 PF01488 Shikimate / quinate 5-dehydrogenase SA40_RS08180 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SA40_RS08185 PF01926 50S ribosome-binding GTPase SA40_RS08190 PF07724 AAA domain (Cdc48 subfamily) SA40_RS08190 PF10431 C-terminal, D2-small domain, of ClpB protein SA40_RS08190 PF06689 ClpX C4-type zinc finger SA40_RS08195 PF05698 Bacterial trigger factor protein (TF) C-terminus SA40_RS08195 PF05697 Bacterial trigger factor protein (TF) SA40_RS08195 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SA40_RS08220 PF00453 Ribosomal protein L20 SA40_RS08225 PF01632 Ribosomal protein L35 SA40_RS08230 PF00707 Translation initiation factor IF-3, C-terminal domain SA40_RS08230 PF05198 Translation initiation factor IF-3, N-terminal domain SA40_RS08235 PF00324 Amino acid permease SA40_RS08240 PF03129 Anticodon binding domain SA40_RS08240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SA40_RS08240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SA40_RS08240 PF02824 TGS domain SA40_RS08250 PF07319 Primosomal protein DnaI N-terminus SA40_RS08250 PF01695 IstB-like ATP binding protein SA40_RS08260 PF03477 ATP cone domain SA40_RS08265 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SA40_RS08265 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SA40_RS08270 PF01121 Dephospho-CoA kinase SA40_RS08275 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SA40_RS08275 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SA40_RS08275 PF06827 Zinc finger found in FPG and IleRS SA40_RS08280 PF00476 DNA polymerase family A SA40_RS08280 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SA40_RS08280 PF01367 5'-3' exonuclease, C-terminal SAM fold SA40_RS08290 PF00989 PAS fold SA40_RS08290 PF00512 His Kinase A (phospho-acceptor) domain SA40_RS08290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS08290 PF16736 Single Cache-like SA40_RS08295 PF00072 Response regulator receiver domain SA40_RS08295 PF00486 Transcriptional regulatory protein, C terminal SA40_RS08305 PF00180 Isocitrate/isopropylmalate dehydrogenase SA40_RS08310 PF00285 Citrate synthase, C-terminal domain SA40_RS08315 PF00324 Amino acid permease SA40_RS08320 PF00391 PEP-utilising enzyme, mobile domain SA40_RS08320 PF00224 Pyruvate kinase, barrel domain SA40_RS08320 PF02887 Pyruvate kinase, alpha/beta domain SA40_RS08325 PF00365 Phosphofructokinase SA40_RS08330 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SA40_RS08335 PF17848 Acetyl-coA carboxylase zinc finger domain SA40_RS08335 PF01039 Carboxyl transferase domain SA40_RS08340 PF00390 Malic enzyme, N-terminal domain SA40_RS08340 PF03949 Malic enzyme, NAD binding domain SA40_RS08345 PF01336 OB-fold nucleic acid binding domain SA40_RS08345 PF14579 Helix-hairpin-helix motif SA40_RS08345 PF17657 Bacterial DNA polymerase III alpha subunit finger domain SA40_RS08345 PF07733 Bacterial DNA polymerase III alpha NTPase domain SA40_RS08345 PF02811 PHP domain SA40_RS08350 PF01368 DHH family SA40_RS08350 PF02272 DHHA1 domain SA40_RS08355 PF00571 CBS domain SA40_RS08355 PF00392 Bacterial regulatory proteins, gntR family SA40_RS08355 PF07085 DRTGG domain SA40_RS08355 PF03061 Thioesterase superfamily SA40_RS08370 PF01321 Creatinase/Prolidase N-terminal domain SA40_RS08370 PF00557 Metallopeptidase family M24 SA40_RS08380 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SA40_RS08380 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SA40_RS08385 PF00582 Universal stress protein family SA40_RS08390 PF00871 Acetokinase family SA40_RS08395 PF02384 N-6 DNA Methylase SA40_RS08400 PF08534 Redoxin SA40_RS08405 PF01925 Sulfite exporter TauE/SafE SA40_RS08410 PF02568 Thiamine biosynthesis protein (ThiI) SA40_RS08410 PF02926 THUMP domain SA40_RS08415 PF00266 Aminotransferase class-V SA40_RS08420 PF06160 Septation ring formation regulator, EzrA SA40_RS08425 PF13185 GAF domain SA40_RS08430 PF01479 S4 domain SA40_RS08430 PF00163 Ribosomal protein S4/S9 N-terminal domain SA40_RS08440 PF03009 Glycerophosphoryl diester phosphodiesterase family SA40_RS08445 PF02566 OsmC-like protein SA40_RS08450 PF00266 Aminotransferase class-V SA40_RS08455 PF01842 ACT domain SA40_RS08455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SA40_RS08455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SA40_RS08480 PF00367 phosphotransferase system, EIIB SA40_RS08480 PF02378 Phosphotransferase system, EIIC SA40_RS08485 PF01553 Acyltransferase SA40_RS08490 PF13180 PDZ domain SA40_RS08495 PF01479 S4 domain SA40_RS08495 PF00579 tRNA synthetases class I (W and Y) SA40_RS08500 PF00912 Transglycosylase SA40_RS08500 PF00905 Penicillin binding protein transpeptidase domain SA40_RS08510 PF04650 YSIRK type signal peptide SA40_RS08510 PF05031 Iron Transport-associated domain SA40_RS08520 PF01268 Formate--tetrahydrofolate ligase SA40_RS08525 PF00501 AMP-binding enzyme SA40_RS08525 PF13193 AMP-binding enzyme C-terminal domain SA40_RS08530 PF00583 Acetyltransferase (GNAT) family SA40_RS08535 PF00850 Histone deacetylase domain SA40_RS08540 PF00356 Bacterial regulatory proteins, lacI family SA40_RS08550 PF00793 DAHP synthetase I family SA40_RS08550 PF01817 Chorismate mutase type II SA40_RS08565 PF06103 Bacterial protein of unknown function (DUF948) SA40_RS08570 PF01225 Mur ligase family, catalytic domain SA40_RS08570 PF02875 Mur ligase family, glutamate ligase domain SA40_RS08570 PF08245 Mur ligase middle domain SA40_RS08575 PF09397 Ftsk gamma domain SA40_RS08575 PF17854 FtsK alpha domain SA40_RS08575 PF01580 FtsK/SpoIIIE family SA40_RS08580 PF14794 Domain of unknown function (DUF4479) SA40_RS08580 PF01588 Putative tRNA binding domain SA40_RS08585 PF07285 Protein of unknown function (DUF1444) SA40_RS08590 PF00085 Thioredoxin SA40_RS08595 PF05343 M42 glutamyl aminopeptidase SA40_RS08605 PF00753 Metallo-beta-lactamase superfamily SA40_RS08610 PF02390 Putative methyltransferase SA40_RS08615 PF01636 Phosphotransferase enzyme family SA40_RS08620 PF01063 Amino-transferase class IV SA40_RS08625 PF01546 Peptidase family M20/M25/M40 SA40_RS08635 PF01479 S4 domain SA40_RS08635 PF00849 RNA pseudouridylate synthase SA40_RS08640 PF01943 Polysaccharide biosynthesis protein SA40_RS08640 PF14667 Polysaccharide biosynthesis C-terminal domain SA40_RS08650 PF01468 GA module SA40_RS08650 PF04650 YSIRK type signal peptide SA40_RS08650 PF07564 Domain of Unknown Function (DUF1542) SA40_RS08660 PF09334 tRNA synthetases class I (M) SA40_RS08660 PF13603 Leucyl-tRNA synthetase, Domain 2 SA40_RS08660 PF00133 tRNA synthetases class I (I, L, M and V) SA40_RS08660 PF08264 Anticodon-binding domain of tRNA SA40_RS08665 PF07690 Major Facilitator Superfamily SA40_RS08670 PF04055 Radical SAM superfamily SA40_RS08670 PF16199 Radical_SAM C-terminal domain SA40_RS08675 PF06962 Putative rRNA methylase SA40_RS08680 PF01047 MarR family SA40_RS08685 PF12146 Serine aminopeptidase, S33 SA40_RS08695 PF01619 Proline dehydrogenase SA40_RS08700 PF00885 6,7-dimethyl-8-ribityllumazine synthase SA40_RS08705 PF00925 GTP cyclohydrolase II SA40_RS08705 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SA40_RS08710 PF00677 Lumazine binding domain SA40_RS08715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SA40_RS08715 PF01872 RibD C-terminal domain SA40_RS08725 PF01022 Bacterial regulatory protein, arsR family SA40_RS08730 PF02040 Arsenical pump membrane protein SA40_RS08735 PF01451 Low molecular weight phosphotyrosine protein phosphatase SA40_RS08740 PF13457 GW (Gly-Tryp) dipeptide domain SA40_RS08740 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SA40_RS08775 PF00923 Transaldolase/Fructose-6-phosphate aldolase SA40_RS08785 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SA40_RS08790 PF02537 CrcB-like protein, Camphor Resistance (CrcB) SA40_RS08795 PF00248 Aldo/keto reductase family SA40_RS08805 PF02772 S-adenosylmethionine synthetase, central domain SA40_RS08805 PF02773 S-adenosylmethionine synthetase, C-terminal domain SA40_RS08805 PF00438 S-adenosylmethionine synthetase, N-terminal domain SA40_RS08810 PF01293 Phosphoenolpyruvate carboxykinase SA40_RS08815 PF00326 Prolyl oligopeptidase family SA40_RS08820 PF00293 NUDIX domain SA40_RS08820 PF09297 NADH pyrophosphatase zinc ribbon domain SA40_RS08825 PF01809 Putative membrane protein insertion efficiency factor SA40_RS08835 PF13193 AMP-binding enzyme C-terminal domain SA40_RS08835 PF00501 AMP-binding enzyme SA40_RS08910 PF11546 Staphylococcal complement inhibitor SCIN SA40_RS08915 PF01520 N-acetylmuramoyl-L-alanine amidase SA40_RS08915 PF05257 CHAP domain SA40_RS08915 PF08460 Bacterial SH3 domain SA40_RS08920 PF01695 IstB-like ATP binding protein SA40_RS08925 PF00665 Integrase core domain SA40_RS08995 PF01593 Flavin containing amine oxidoreductase SA40_RS09000 PF00762 Ferrochelatase SA40_RS09005 PF01208 Uroporphyrinogen decarboxylase (URO-D) SA40_RS09025 PF00005 ABC transporter SA40_RS09030 PF01230 HIT domain SA40_RS09045 PF00639 PPIC-type PPIASE domain SA40_RS09050 PF01966 HD domain SA40_RS09060 PF00149 Calcineurin-like phosphoesterase SA40_RS09070 PF06133 Control of competence regulator ComK, YlbF/YmcA SA40_RS09075 PF04286 Protein of unknown function (DUF445) SA40_RS09085 PF00196 Bacterial regulatory proteins, luxR family SA40_RS09085 PF00072 Response regulator receiver domain SA40_RS09090 PF07730 Histidine kinase SA40_RS09090 PF13185 GAF domain SA40_RS09095 PF01479 S4 domain SA40_RS09095 PF00849 RNA pseudouridylate synthase SA40_RS09100 PF10415 Fumarase C C-terminus SA40_RS09100 PF00206 Lyase SA40_RS09130 PF00588 SpoU rRNA Methylase family SA40_RS09135 PF08331 Domain of unknown function (DUF1730) SA40_RS09140 PF00005 ABC transporter SA40_RS09145 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS09305 PF01475 Ferric uptake regulator family SA40_RS09310 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SA40_RS09310 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SA40_RS09315 PF00578 AhpC/TSA family SA40_RS09320 PF00202 Aminotransferase class-III SA40_RS09325 PF06081 Aromatic acid exporter family member 1 SA40_RS09335 PF00664 ABC transporter transmembrane region SA40_RS09335 PF00005 ABC transporter SA40_RS09340 PF04167 Protein of unknown function (DUF402) SA40_RS09345 PF00730 HhH-GPD superfamily base excision DNA repair protein SA40_RS09345 PF14815 NUDIX domain SA40_RS09350 PF04307 LexA-binding, inner membrane-associated putative hydrolase SA40_RS09365 PF01476 LysM domain SA40_RS09365 PF00005 ABC transporter SA40_RS09375 PF02631 RecX family SA40_RS09380 PF00912 Transglycosylase SA40_RS09385 PF01965 DJ-1/PfpI family SA40_RS09395 PF04055 Radical SAM superfamily SA40_RS09395 PF08756 YfkB-like domain SA40_RS09400 PF03061 Thioesterase superfamily SA40_RS09405 PF02073 Thermophilic metalloprotease (M29) SA40_RS09410 PF06569 Protein of unknown function (DUF1128) SA40_RS09415 PF01451 Low molecular weight phosphotyrosine protein phosphatase SA40_RS09425 PF03631 Virulence factor BrkB SA40_RS09430 PF00072 Response regulator receiver domain SA40_RS09430 PF00196 Bacterial regulatory proteins, luxR family SA40_RS09435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS09435 PF07730 Histidine kinase SA40_RS09450 PF00557 Metallopeptidase family M24 SA40_RS09455 PF06081 Aromatic acid exporter family member 1 SA40_RS09470 PF07685 CobB/CobQ-like glutamine amidotransferase domain SA40_RS09475 PF08353 Domain of unknown function (DUF1727) SA40_RS09475 PF08245 Mur ligase middle domain SA40_RS09480 PF00210 Ferritin-like domain SA40_RS09495 PF11799 impB/mucB/samB family C-terminal domain SA40_RS09495 PF00817 impB/mucB/samB family SA40_RS09505 PF05958 tRNA (Uracil-5-)-methyltransferase SA40_RS09510 PF00781 Diacylglycerol kinase catalytic domain SA40_RS09520 PF02637 GatB domain SA40_RS09520 PF02934 GatB/GatE catalytic domain SA40_RS09525 PF01425 Amidase SA40_RS09530 PF02686 Glu-tRNAGln amidotransferase C subunit SA40_RS09535 PF00474 Sodium:solute symporter family SA40_RS09540 PF07537 CamS sex pheromone cAM373 precursor SA40_RS09545 PF01653 NAD-dependent DNA ligase adenylation domain SA40_RS09545 PF00533 BRCA1 C Terminus (BRCT) domain SA40_RS09545 PF03120 NAD-dependent DNA ligase OB-fold domain SA40_RS09545 PF12826 Helix-hairpin-helix motif SA40_RS09545 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SA40_RS09550 PF13361 UvrD-like helicase C-terminal domain SA40_RS09550 PF00580 UvrD/REP helicase N-terminal domain SA40_RS09555 PF01884 PcrB family SA40_RS09560 PF01371 Trp repressor protein SA40_RS09565 PF00206 Lyase SA40_RS09565 PF10397 Adenylosuccinate lyase C-terminus SA40_RS09570 PF14731 Staphopain proregion SA40_RS09570 PF05543 Staphopain peptidase C47 SA40_RS09580 PF14044 NETI protein SA40_RS09585 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SA40_RS09590 PF02540 NAD synthase SA40_RS09595 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SA40_RS09595 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain SA40_RS09595 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain SA40_RS09600 PF02898 Nitric oxide synthase, oxygenase domain SA40_RS09605 PF01842 ACT domain SA40_RS09605 PF00800 Prephenate dehydratase SA40_RS09615 PF00939 Sodium:sulfate symporter transmembrane region SA40_RS09625 PF00857 Isochorismatase family SA40_RS09630 PF01368 DHH family SA40_RS09630 PF02833 DHHA2 domain SA40_RS09640 PF00171 Aldehyde dehydrogenase family SA40_RS09645 PF10282 Lactonase, 7-bladed beta-propeller SA40_RS09690 PF00005 ABC transporter SA40_RS09700 PF00005 ABC transporter SA40_RS09705 PF00392 Bacterial regulatory proteins, gntR family SA40_RS09725 PF03642 MAP domain SA40_RS09730 PF03642 MAP domain SA40_RS09735 PF03372 Endonuclease/Exonuclease/phosphatase family SA40_RS09740 PF03372 Endonuclease/Exonuclease/phosphatase family SA40_RS09745 PF07968 Leukocidin/Hemolysin toxin family SA40_RS09750 PF07968 Leukocidin/Hemolysin toxin family SA40_RS09755 PF01546 Peptidase family M20/M25/M40 SA40_RS09755 PF07687 Peptidase dimerisation domain SA40_RS09760 PF02386 Cation transport protein SA40_RS09765 PF00118 TCP-1/cpn60 chaperonin family SA40_RS09770 PF00166 Chaperonin 10 Kd subunit SA40_RS09775 PF02517 CPBP intramembrane metalloprotease SA40_RS09790 PF00795 Carbon-nitrogen hydrolase SA40_RS09800 PF04647 Accessory gene regulator B SA40_RS09815 PF00072 Response regulator receiver domain SA40_RS09815 PF04397 LytTr DNA-binding domain SA40_RS09825 PF00294 pfkB family carbohydrate kinase SA40_RS09830 PF00251 Glycosyl hydrolases family 32 N-terminal domain SA40_RS09830 PF08244 Glycosyl hydrolases family 32 C terminal SA40_RS09835 PF00356 Bacterial regulatory proteins, lacI family SA40_RS09835 PF13407 Periplasmic binding protein domain SA40_RS09840 PF00909 Ammonium Transporter Family SA40_RS09845 PF01206 Sulfurtransferase TusA SA40_RS09850 PF04143 Sulphur transport SA40_RS09855 PF06971 Putative DNA-binding protein N-terminus SA40_RS09855 PF02629 CoA binding domain SA40_RS09860 PF12848 ABC transporter SA40_RS09860 PF00005 ABC transporter SA40_RS09860 PF16326 ABC transporter C-terminal domain SA40_RS09875 PF05192 MutS domain III SA40_RS09875 PF05190 MutS family domain IV SA40_RS09875 PF05188 MutS domain II SA40_RS09875 PF00488 MutS domain V SA40_RS09875 PF01624 MutS domain I SA40_RS09880 PF00814 Glycoprotease family SA40_RS09885 PF00583 Acetyltransferase (GNAT) family SA40_RS09890 PF00814 Glycoprotease family SA40_RS09895 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE SA40_RS09905 PF00920 Dehydratase family SA40_RS09910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SA40_RS09910 PF00205 Thiamine pyrophosphate enzyme, central domain SA40_RS09910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SA40_RS09920 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain SA40_RS09920 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SA40_RS09925 PF00682 HMGL-like SA40_RS09925 PF08502 LeuA allosteric (dimerisation) domain SA40_RS09930 PF00180 Isocitrate/isopropylmalate dehydrogenase SA40_RS09935 PF00330 Aconitase family (aconitate hydratase) SA40_RS09940 PF00694 Aconitase C-terminal domain SA40_RS09945 PF00585 C-terminal regulatory domain of Threonine dehydratase SA40_RS09945 PF00291 Pyridoxal-phosphate dependent enzyme SA40_RS09980 PF17283 SprT-like zinc ribbon domain SA40_RS09980 PF10263 SprT-like family SA40_RS09985 PF09371 Tex-like protein N-terminal domain SA40_RS09985 PF16921 Tex protein YqgF-like domain SA40_RS09985 PF17674 HHH domain SA40_RS09985 PF00575 S1 RNA binding domain SA40_RS09990 PF04545 Sigma-70, region 4 SA40_RS09990 PF04539 Sigma-70 region 3 SA40_RS09990 PF04542 Sigma-70 region 2 SA40_RS09995 PF13581 Histidine kinase-like ATPase domain SA40_RS10000 PF01740 STAS domain SA40_RS10005 PF07228 Stage II sporulation protein E (SpoIIE) SA40_RS10005 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SA40_RS10015 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system SA40_RS10025 PF01168 Alanine racemase, N-terminal domain SA40_RS10025 PF00842 Alanine racemase, C-terminal domain SA40_RS10030 PF01648 4'-phosphopantetheinyl transferase superfamily SA40_RS10040 PF03703 Bacterial PH domain SA40_RS10050 PF02669 K+-transporting ATPase, c chain SA40_RS10060 PF03814 Potassium-transporting ATPase A subunit SA40_RS10070 PF13493 Domain of unknown function (DUF4118) SA40_RS10070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS10070 PF00512 His Kinase A (phospho-acceptor) domain SA40_RS10070 PF02702 Osmosensitive K+ channel His kinase sensor domain SA40_RS10075 PF00486 Transcriptional regulatory protein, C terminal SA40_RS10075 PF00072 Response regulator receiver domain SA40_RS10080 PF00270 DEAD/DEAH box helicase SA40_RS10080 PF00271 Helicase conserved C-terminal domain SA40_RS10085 PF08245 Mur ligase middle domain SA40_RS10085 PF01225 Mur ligase family, catalytic domain SA40_RS10085 PF02875 Mur ligase family, glutamate ligase domain SA40_RS10090 PF01820 D-ala D-ala ligase N-terminus SA40_RS10090 PF07478 D-ala D-ala ligase C-terminus SA40_RS10095 PF01098 Cell cycle protein SA40_RS10110 PF02583 Metal-sensitive transcriptional repressor SA40_RS10115 PF13396 Phospholipase_D-nuclease N-terminal SA40_RS10115 PF13091 PLD-like domain SA40_RS10120 PF01966 HD domain SA40_RS10130 PF02096 60Kd inner membrane protein SA40_RS10135 PF02581 Thiamine monophosphate synthase SA40_RS10140 PF02110 Hydroxyethylthiazole kinase family SA40_RS10145 PF08543 Phosphomethylpyrimidine kinase SA40_RS10150 PF03070 TENA/THI-4/PQQC family SA40_RS10160 PF06737 Transglycosylase-like domain SA40_RS10165 PF00436 Single-strand binding protein family SA40_RS10170 PF01695 IstB-like ATP binding protein SA40_RS10175 PF00665 Integrase core domain SA40_RS10185 PF07977 FabA-like domain SA40_RS10190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SA40_RS10210 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SA40_RS10210 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SA40_RS10215 PF02874 ATP synthase alpha/beta family, beta-barrel domain SA40_RS10215 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SA40_RS10220 PF00231 ATP synthase SA40_RS10225 PF00306 ATP synthase alpha/beta chain, C terminal domain SA40_RS10225 PF02874 ATP synthase alpha/beta family, beta-barrel domain SA40_RS10225 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SA40_RS10230 PF00213 ATP synthase delta (OSCP) subunit SA40_RS10235 PF00430 ATP synthase B/B' CF(0) SA40_RS10240 PF00137 ATP synthase subunit C SA40_RS10245 PF00119 ATP synthase A chain SA40_RS10255 PF02350 UDP-N-acetylglucosamine 2-epimerase SA40_RS10265 PF00464 Serine hydroxymethyltransferase SA40_RS10270 PF04260 Protein of unknown function (DUF436) SA40_RS10275 PF01451 Low molecular weight phosphotyrosine protein phosphatase SA40_RS10280 PF03481 Putative GTP-binding controlling metal-binding SA40_RS10280 PF01300 Telomere recombination SA40_RS10285 PF17827 PrmC N-terminal domain SA40_RS10285 PF05175 Methyltransferase small domain SA40_RS10290 PF00472 RF-1 domain SA40_RS10290 PF03462 PCRF domain SA40_RS10295 PF00265 Thymidine kinase SA40_RS10300 PF01197 Ribosomal protein L31 SA40_RS10305 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SA40_RS10305 PF07498 Rho termination factor, N-terminal domain SA40_RS10305 PF07497 Rho termination factor, RNA-binding domain SA40_RS10310 PF00171 Aldehyde dehydrogenase family SA40_RS10320 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SA40_RS10325 PF01116 Fructose-bisphosphate aldolase class-II SA40_RS10335 PF06418 CTP synthase N-terminus SA40_RS10335 PF00117 Glutamine amidotransferase class-I SA40_RS10340 PF05066 HB1, ASXL, restriction endonuclease HTH domain SA40_RS10355 PF03630 Fumble SA40_RS10375 PF02664 S-Ribosylhomocysteinase (LuxS) SA40_RS10385 PF00591 Glycosyl transferase family, a/b domain SA40_RS10385 PF02885 Glycosyl transferase family, helical bundle domain SA40_RS10385 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SA40_RS10395 PF01791 DeoC/LacD family aldolase SA40_RS10400 PF01048 Phosphorylase superfamily SA40_RS10405 PF00210 Ferritin-like domain SA40_RS10425 PF01238 Phosphomannose isomerase type I SA40_RS10430 PF13460 NAD(P)H-binding SA40_RS10435 PF01022 Bacterial regulatory protein, arsR family SA40_RS10440 PF16916 Dimerisation domain of Zinc Transporter SA40_RS10440 PF01545 Cation efflux family SA40_RS10455 PF02796 Helix-turn-helix domain of resolvase SA40_RS10455 PF00239 Resolvase, N terminal domain SA40_RS10480 PF00005 ABC transporter SA40_RS10485 PF01380 SIS domain SA40_RS10490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SA40_RS10490 PF02378 Phosphotransferase system, EIIC SA40_RS10495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SA40_RS10495 PF08279 HTH domain SA40_RS10495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SA40_RS10495 PF05043 Mga helix-turn-helix domain SA40_RS10495 PF00874 PRD domain SA40_RS10500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SA40_RS10505 PF01232 Mannitol dehydrogenase Rossmann domain SA40_RS10505 PF08125 Mannitol dehydrogenase C-terminal domain SA40_RS10515 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SA40_RS10515 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SA40_RS10515 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SA40_RS10515 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SA40_RS10525 PF02457 DisA bacterial checkpoint controller nucleotide-binding SA40_RS10530 PF00491 Arginase family SA40_RS10585 PF10609 NUBPL iron-transfer P-loop NTPase SA40_RS10595 PF17080 Multidrug Resistance efflux pump SA40_RS10600 PF07690 Major Facilitator Superfamily SA40_RS10605 PF03006 Haemolysin-III related SA40_RS10610 PF01704 UTP--glucose-1-phosphate uridylyltransferase SA40_RS10615 PF04307 LexA-binding, inner membrane-associated putative hydrolase SA40_RS10625 PF07670 Nucleoside recognition SA40_RS10630 PF01032 FecCD transport family SA40_RS10635 PF01032 FecCD transport family SA40_RS10640 PF01497 Periplasmic binding protein SA40_RS10650 PF01168 Alanine racemase, N-terminal domain SA40_RS10655 PF06276 Ferric iron reductase FhuF-like transporter SA40_RS10655 PF04183 IucA / IucC family SA40_RS10660 PF05977 Transmembrane secretion effector SA40_RS10670 PF03780 Asp23 family, cell envelope-related function SA40_RS10685 PF02028 BCCT, betaine/carnitine/choline family transporter SA40_RS10690 PF08240 Alcohol dehydrogenase GroES-like domain SA40_RS10690 PF00107 Zinc-binding dehydrogenase SA40_RS10695 PF16884 N-terminal domain of oxidoreductase SA40_RS10695 PF00107 Zinc-binding dehydrogenase SA40_RS10705 PF00232 Glycosyl hydrolase family 1 SA40_RS10710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SA40_RS10710 PF02378 Phosphotransferase system, EIIC SA40_RS10715 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SA40_RS10720 PF01791 DeoC/LacD family aldolase SA40_RS10725 PF00294 pfkB family carbohydrate kinase SA40_RS10730 PF02502 Ribose/Galactose Isomerase SA40_RS10735 PF02502 Ribose/Galactose Isomerase SA40_RS10740 PF08220 DeoR-like helix-turn-helix domain SA40_RS10740 PF00455 DeoR C terminal sensor domain SA40_RS10745 PF02146 Sir2 family SA40_RS10760 PF00248 Aldo/keto reductase family SA40_RS10765 PF13411 MerR HTH family regulatory protein SA40_RS10775 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SA40_RS10775 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SA40_RS10775 PF02278 Polysaccharide lyase family 8, super-sandwich domain SA40_RS10780 PF08279 HTH domain SA40_RS10780 PF13280 WYL domain SA40_RS10785 PF01965 DJ-1/PfpI family SA40_RS10795 PF03306 Alpha-acetolactate decarboxylase SA40_RS10800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SA40_RS10800 PF00205 Thiamine pyrophosphate enzyme, central domain SA40_RS10800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SA40_RS10810 PF00270 DEAD/DEAH box helicase SA40_RS10810 PF17191 RecG wedge domain SA40_RS10810 PF13749 Putative ATP-dependent DNA helicase recG C-terminal SA40_RS10815 PF00380 Ribosomal protein S9/S16 SA40_RS10820 PF00572 Ribosomal protein L13 SA40_RS10825 PF01416 tRNA pseudouridine synthase SA40_RS10830 PF02361 Cobalt transport protein SA40_RS10835 PF00005 ABC transporter SA40_RS10840 PF00005 ABC transporter SA40_RS10845 PF01196 Ribosomal protein L17 SA40_RS10850 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SA40_RS10850 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SA40_RS10850 PF01000 RNA polymerase Rpb3/RpoA insert domain SA40_RS10855 PF00411 Ribosomal protein S11 SA40_RS10860 PF00416 Ribosomal protein S13/S18 SA40_RS10865 PF00444 Ribosomal protein L36 SA40_RS10870 PF01176 Translation initiation factor 1A / IF-1 SA40_RS10875 PF05191 Adenylate kinase, active site lid SA40_RS10880 PF00344 SecY translocase SA40_RS10885 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A SA40_RS10890 PF00327 Ribosomal protein L30p/L7e SA40_RS10895 PF00333 Ribosomal protein S5, N-terminal domain SA40_RS10895 PF03719 Ribosomal protein S5, C-terminal domain SA40_RS10900 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast SA40_RS10905 PF00347 Ribosomal protein L6 SA40_RS10910 PF00410 Ribosomal protein S8 SA40_RS10915 PF00253 Ribosomal protein S14p/S29e SA40_RS10920 PF00281 Ribosomal protein L5 SA40_RS10920 PF00673 ribosomal L5P family C-terminus SA40_RS10925 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 SA40_RS10925 PF00467 KOW motif SA40_RS10930 PF00238 Ribosomal protein L14p/L23e SA40_RS10935 PF00366 Ribosomal protein S17 SA40_RS10940 PF00831 Ribosomal L29 protein SA40_RS10945 PF00252 Ribosomal protein L16p/L10e SA40_RS10950 PF00189 Ribosomal protein S3, C-terminal domain SA40_RS10950 PF07650 KH domain SA40_RS10955 PF00237 Ribosomal protein L22p/L17e SA40_RS10960 PF00203 Ribosomal protein S19 SA40_RS10965 PF03947 Ribosomal Proteins L2, C-terminal domain SA40_RS10965 PF00181 Ribosomal Proteins L2, RNA binding domain SA40_RS10970 PF00276 Ribosomal protein L23 SA40_RS10975 PF00573 Ribosomal protein L4/L1 family SA40_RS10980 PF00297 Ribosomal protein L3 SA40_RS10985 PF00338 Ribosomal protein S10p/S20e SA40_RS10995 PF00860 Permease family SA40_RS11000 PF01131 DNA topoisomerase SA40_RS11000 PF01751 Toprim domain SA40_RS11015 PF06800 Sugar transport protein SA40_RS11040 PF00873 AcrB/AcrD/AcrF family SA40_RS11045 PF02388 FemAB family SA40_RS11060 PF01047 MarR family SA40_RS11070 PF01047 MarR family SA40_RS11080 PF04055 Radical SAM superfamily SA40_RS11080 PF06463 Molybdenum Cofactor Synthesis C SA40_RS11085 PF12804 MobA-like NTP transferase domain SA40_RS11090 PF02597 ThiS family SA40_RS11095 PF02391 MoaE protein SA40_RS11100 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SA40_RS11105 PF03453 MoeA N-terminal region (domain I and II) SA40_RS11105 PF03454 MoeA C-terminal region (domain IV) SA40_RS11105 PF00994 Probable molybdopterin binding domain SA40_RS11110 PF01967 MoaC family SA40_RS11115 PF00994 Probable molybdopterin binding domain SA40_RS11120 PF00899 ThiF family SA40_RS11125 PF00005 ABC transporter SA40_RS11125 PF03459 TOBE domain SA40_RS11130 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS11140 PF02634 FdhD/NarQ family SA40_RS11150 PF02632 BioY family SA40_RS11155 PF01156 Inosine-uridine preferring nucleoside hydrolase SA40_RS11165 PF02770 Acyl-CoA dehydrogenase, middle domain SA40_RS11165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SA40_RS11165 PF08028 Acyl-CoA dehydrogenase, C-terminal domain SA40_RS11170 PF03253 Urea transporter SA40_RS11175 PF00547 Urease, gamma subunit SA40_RS11180 PF00699 Urease beta subunit SA40_RS11185 PF01979 Amidohydrolase family SA40_RS11185 PF00449 Urease alpha-subunit, N-terminal domain SA40_RS11190 PF05194 UreE urease accessory protein, C-terminal domain SA40_RS11190 PF02814 UreE urease accessory protein, N-terminal domain SA40_RS11195 PF01730 UreF SA40_RS11200 PF02492 CobW/HypB/UreG, nucleotide-binding domain SA40_RS11205 PF01774 UreD urease accessory protein SA40_RS11235 PF05257 CHAP domain SA40_RS11245 PF03553 Na+/H+ antiporter family SA40_RS11250 PF02558 Ketopantoate reductase PanE/ApbA SA40_RS11250 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain SA40_RS11260 PF05257 CHAP domain SA40_RS11270 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SA40_RS11270 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SA40_RS11275 PF01494 FAD binding domain SA40_RS11285 PF13457 GW (Gly-Tryp) dipeptide domain SA40_RS11285 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SA40_RS11300 PF12838 4Fe-4S dicluster domain SA40_RS11300 PF01568 Molydopterin dinucleotide binding domain SA40_RS11300 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SA40_RS11300 PF00384 Molybdopterin oxidoreductase SA40_RS11300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SA40_RS11305 PF03816 Cell envelope-related transcriptional attenuator domain SA40_RS11320 PF02517 CPBP intramembrane metalloprotease SA40_RS11335 PF00324 Amino acid permease SA40_RS11355 PF13419 Haloacid dehalogenase-like hydrolase SA40_RS11360 PF01758 Sodium Bile acid symporter family SA40_RS11370 PF00367 phosphotransferase system, EIIB SA40_RS11370 PF02378 Phosphotransferase system, EIIC SA40_RS11375 PF01380 SIS domain SA40_RS11375 PF01418 Helix-turn-helix domain, rpiR family SA40_RS11400 PF01546 Peptidase family M20/M25/M40 SA40_RS11400 PF07687 Peptidase dimerisation domain SA40_RS11405 PF01979 Amidohydrolase family SA40_RS11410 PF17391 Urocanase N-terminal domain SA40_RS11410 PF01175 Urocanase Rossmann-like domain SA40_RS11410 PF17392 Urocanase C-terminal domain SA40_RS11415 PF03466 LysR substrate binding domain SA40_RS11415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SA40_RS11420 PF00491 Arginase family SA40_RS11430 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SA40_RS11435 PF03473 MOSC domain SA40_RS11435 PF03475 3-alpha domain SA40_RS11460 PF00005 ABC transporter SA40_RS11460 PF13732 Domain of unknown function (DUF4162) SA40_RS11465 PF05656 Protein of unknown function (DUF805) SA40_RS11470 PF02245 Methylpurine-DNA glycosylase (MPG) SA40_RS11475 PF03616 Sodium/glutamate symporter SA40_RS11480 PF01070 FMN-dependent dehydrogenase SA40_RS11485 PF01544 CorA-like Mg2+ transporter protein SA40_RS11500 PF07859 alpha/beta hydrolase fold SA40_RS11500 PF00934 PE family SA40_RS11510 PF07690 Major Facilitator Superfamily SA40_RS11530 PF07690 Major Facilitator Superfamily SA40_RS11550 PF12802 MarR family SA40_RS11560 PF00005 ABC transporter SA40_RS11565 PF02687 FtsX-like permease family SA40_RS11570 PF00486 Transcriptional regulatory protein, C terminal SA40_RS11570 PF00072 Response regulator receiver domain SA40_RS11575 PF00672 HAMP domain SA40_RS11575 PF00512 His Kinase A (phospho-acceptor) domain SA40_RS11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS11580 PF04397 LytTr DNA-binding domain SA40_RS11595 PF00005 ABC transporter SA40_RS11605 PF06039 Malate:quinone oxidoreductase (Mqo) SA40_RS11610 PF02652 L-lactate permease SA40_RS11615 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SA40_RS11625 PF13673 Acetyltransferase (GNAT) domain SA40_RS11630 PF08240 Alcohol dehydrogenase GroES-like domain SA40_RS11630 PF00107 Zinc-binding dehydrogenase SA40_RS11640 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS11675 PF00367 phosphotransferase system, EIIB SA40_RS11675 PF02378 Phosphotransferase system, EIIC SA40_RS11690 PF16242 Pyridoxamine 5'-phosphate oxidase like SA40_RS11700 PF00375 Sodium:dicarboxylate symporter family SA40_RS11710 PF01047 MarR family SA40_RS11715 PF00011 Hsp20/alpha crystallin family SA40_RS11720 PF07690 Major Facilitator Superfamily SA40_RS11730 PF07739 TipAS antibiotic-recognition domain SA40_RS11730 PF13411 MerR HTH family regulatory protein SA40_RS11735 PF00196 Bacterial regulatory proteins, luxR family SA40_RS11735 PF00072 Response regulator receiver domain SA40_RS11740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS11740 PF07730 Histidine kinase SA40_RS11750 PF02665 Nitrate reductase gamma subunit SA40_RS11760 PF14711 Respiratory nitrate reductase beta C-terminal SA40_RS11760 PF13247 4Fe-4S dicluster domain SA40_RS11765 PF14710 Respiratory nitrate reductase alpha N-terminal SA40_RS11765 PF01568 Molydopterin dinucleotide binding domain SA40_RS11765 PF00384 Molybdopterin oxidoreductase SA40_RS11770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SA40_RS11775 PF00355 Rieske [2Fe-2S] domain SA40_RS11780 PF04324 BFD-like [2Fe-2S] binding domain SA40_RS11780 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SA40_RS11780 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SA40_RS11780 PF07992 Pyridine nucleotide-disulphide oxidoreductase SA40_RS11780 PF18267 Rubredoxin NAD+ reductase C-terminal domain SA40_RS11790 PF00583 Acetyltransferase (GNAT) family SA40_RS11795 PF01226 Formate/nitrite transporter SA40_RS11810 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment SA40_RS11810 PF01297 Zinc-uptake complex component A periplasmic SA40_RS11815 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system SA40_RS11840 PF02388 FemAB family SA40_RS11845 PF00005 ABC transporter SA40_RS11850 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS11855 PF00497 Bacterial extracellular solute-binding proteins, family 3 SA40_RS11860 PF07690 Major Facilitator Superfamily SA40_RS11870 PF00300 Histidine phosphatase superfamily (branch 1) SA40_RS11875 PF16916 Dimerisation domain of Zinc Transporter SA40_RS11875 PF01545 Cation efflux family SA40_RS11885 PF11621 C3 binding domain 4 of IgG-bind protein SBI SA40_RS11885 PF02216 B domain SA40_RS11895 PF07968 Leukocidin/Hemolysin toxin family SA40_RS11900 PF07968 Leukocidin/Hemolysin toxin family SA40_RS11905 PF07968 Leukocidin/Hemolysin toxin family SA40_RS11915 PF03744 6-carboxyhexanoate--CoA ligase SA40_RS11920 PF00155 Aminotransferase class I and II SA40_RS11925 PF06968 Biotin and Thiamin Synthesis associated domain SA40_RS11925 PF04055 Radical SAM superfamily SA40_RS11930 PF00202 Aminotransferase class-III SA40_RS11950 PF00005 ABC transporter SA40_RS11950 PF00664 ABC transporter transmembrane region SA40_RS11955 PF00664 ABC transporter transmembrane region SA40_RS11955 PF04954 Siderophore-interacting protein SA40_RS11955 PF08021 Siderophore-interacting FAD-binding domain SA40_RS11955 PF00005 ABC transporter SA40_RS11970 PF02595 Glycerate kinase family SA40_RS11980 PF07690 Major Facilitator Superfamily SA40_RS11995 PF00149 Calcineurin-like phosphoesterase SA40_RS12000 PF00324 Amino acid permease SA40_RS12005 PF00999 Sodium/hydrogen exchanger family SA40_RS12015 PF13520 Amino acid permease SA40_RS12025 PF00144 Beta-lactamase SA40_RS12040 PF02558 Ketopantoate reductase PanE/ApbA SA40_RS12040 PF08546 Ketopantoate reductase PanE/ApbA C terminal SA40_RS12045 PF07690 Major Facilitator Superfamily SA40_RS12050 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS12055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SA40_RS12060 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS12065 PF00005 ABC transporter SA40_RS12065 PF00571 CBS domain SA40_RS12080 PF08818 Domain of unknown function (DU1801) SA40_RS12085 PF13520 Amino acid permease SA40_RS12090 PF00135 Carboxylesterase family SA40_RS12095 PF07690 Major Facilitator Superfamily SA40_RS12100 PF03649 Uncharacterised protein family (UPF0014) SA40_RS12105 PF00005 ABC transporter SA40_RS12110 PF05343 M42 glutamyl aminopeptidase SA40_RS12115 PF06998 Protein of unknown function (DUF1307) SA40_RS12120 PF01645 Conserved region in glutamate synthase SA40_RS12130 PF07690 Major Facilitator Superfamily SA40_RS12135 PF00005 ABC transporter SA40_RS12140 PF00005 ABC transporter SA40_RS12145 PF12911 N-terminal TM domain of oligopeptide transport permease C SA40_RS12145 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS12150 PF00528 Binding-protein-dependent transport system inner membrane component SA40_RS12155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SA40_RS12160 PF10100 Staphylopine dehydrogenase SA40_RS12185 PF03806 AbgT putative transporter family SA40_RS12190 PF02627 Carboxymuconolactone decarboxylase family SA40_RS12220 PF00106 short chain dehydrogenase SA40_RS12245 PF04507 Csa1 family SA40_RS12265 PF04507 Csa1 family SA40_RS12270 PF04507 Csa1 family SA40_RS12275 PF04507 Csa1 family SA40_RS12280 PF04507 Csa1 family SA40_RS12290 PF00293 NUDIX domain SA40_RS12295 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SA40_RS12295 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SA40_RS12295 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SA40_RS12295 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SA40_RS12340 PF13463 Winged helix DNA-binding domain SA40_RS12350 PF00483 Nucleotidyl transferase SA40_RS12355 PF00746 LPXTG cell wall anchor motif SA40_RS12355 PF02986 Fibronectin binding repeat SA40_RS12355 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SA40_RS12355 PF04650 YSIRK type signal peptide SA40_RS12355 PF17961 Bacterial Ig domain SA40_RS12360 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SA40_RS12360 PF02986 Fibronectin binding repeat SA40_RS12360 PF00746 LPXTG cell wall anchor motif SA40_RS12360 PF17961 Bacterial Ig domain SA40_RS12360 PF04650 YSIRK type signal peptide SA40_RS12365 PF04650 YSIRK type signal peptide SA40_RS12365 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SA40_RS12365 PF00746 LPXTG cell wall anchor motif SA40_RS12365 PF02986 Fibronectin binding repeat SA40_RS12365 PF17961 Bacterial Ig domain SA40_RS12375 PF02447 GntP family permease SA40_RS12380 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SA40_RS12380 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SA40_RS12385 PF00392 Bacterial regulatory proteins, gntR family SA40_RS12385 PF07729 FCD domain SA40_RS12390 PF13411 MerR HTH family regulatory protein SA40_RS12395 PF04607 Region found in RelA / SpoT proteins SA40_RS12400 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) SA40_RS12410 PF07690 Major Facilitator Superfamily SA40_RS12415 PF09335 SNARE associated Golgi protein SA40_RS12425 PF00005 ABC transporter SA40_RS12435 PF12146 Serine aminopeptidase, S33 SA40_RS12445 PF12146 Serine aminopeptidase, S33 SA40_RS12465 PF06874 Firmicute fructose-1,6-bisphosphatase SA40_RS12475 PF01738 Dienelactone hydrolase family SA40_RS12480 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SA40_RS12485 PF01047 MarR family SA40_RS12495 PF01797 Transposase IS200 like SA40_RS12500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SA40_RS12505 PF00881 Nitroreductase family SA40_RS12510 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SA40_RS12510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SA40_RS12520 PF00005 ABC transporter SA40_RS12530 PF04203 Sortase domain SA40_RS12550 PF03313 Serine dehydratase alpha chain SA40_RS12555 PF01842 ACT domain SA40_RS12555 PF03315 Serine dehydratase beta chain SA40_RS12570 PF00892 EamA-like transporter family SA40_RS12575 PF00934 PE family SA40_RS12575 PF07859 alpha/beta hydrolase fold SA40_RS12590 PF02378 Phosphotransferase system, EIIC SA40_RS12590 PF00367 phosphotransferase system, EIIB SA40_RS12590 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SA40_RS12595 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SA40_RS12595 PF00205 Thiamine pyrophosphate enzyme, central domain SA40_RS12595 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SA40_RS12600 PF04172 LrgB-like family SA40_RS12605 PF03788 LrgA family SA40_RS12610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SA40_RS12610 PF03466 LysR substrate binding domain SA40_RS12620 PF05257 CHAP domain SA40_RS12625 PF00368 Hydroxymethylglutaryl-coenzyme A reductase SA40_RS12630 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal SA40_RS12630 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal SA40_RS12640 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain SA40_RS12640 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SA40_RS12645 PF07724 AAA domain (Cdc48 subfamily) SA40_RS12645 PF17871 AAA lid domain SA40_RS12645 PF00004 ATPase family associated with various cellular activities (AAA) SA40_RS12645 PF10431 C-terminal, D2-small domain, of ClpB protein SA40_RS12655 PF17910 FeoB cytosolic helical domain SA40_RS12655 PF07664 Ferrous iron transport protein B C terminus SA40_RS12655 PF07670 Nucleoside recognition SA40_RS12655 PF02421 Ferrous iron transport protein B SA40_RS12665 PF03176 MMPL family SA40_RS12680 PF00171 Aldehyde dehydrogenase family SA40_RS12685 PF00132 Bacterial transferase hexapeptide (six repeats) SA40_RS12685 PF14602 Hexapeptide repeat of succinyl-transferase SA40_RS12685 PF12464 Maltose acetyltransferase SA40_RS12695 PF00403 Heavy-metal-associated domain SA40_RS12700 PF00403 Heavy-metal-associated domain SA40_RS12705 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SA40_RS12705 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SA40_RS12710 PF00155 Aminotransferase class I and II SA40_RS12715 PF01593 Flavin containing amine oxidoreductase SA40_RS12725 PF00535 Glycosyl transferase family 2 SA40_RS12730 PF01593 Flavin containing amine oxidoreductase SA40_RS12745 PF01757 Acyltransferase family SA40_RS12750 PF00583 Acetyltransferase (GNAT) family SA40_RS12755 PF01464 Transglycosylase SLT domain SA40_RS12785 PF05979 Bacterial protein of unknown function (DUF896) SA40_RS12805 PF00440 Bacterial regulatory proteins, tetR family SA40_RS12810 PF00106 short chain dehydrogenase SA40_RS12820 PF00561 alpha/beta hydrolase fold SA40_RS12825 PF02492 CobW/HypB/UreG, nucleotide-binding domain SA40_RS12825 PF07683 Cobalamin synthesis protein cobW C-terminal domain SA40_RS12855 PF03881 Fructosamine kinase SA40_RS12860 PF01180 Dihydroorotate dehydrogenase SA40_RS12870 PF02677 Epoxyqueuosine reductase QueH SA40_RS12900 PF13610 DDE domain SA40_RS12910 PF00089 Trypsin SA40_RS12915 PF02261 Aspartate decarboxylase SA40_RS12920 PF02569 Pantoate-beta-alanine ligase SA40_RS12925 PF02548 Ketopantoate hydroxymethyltransferase SA40_RS12930 PF08546 Ketopantoate reductase PanE/ApbA C terminal SA40_RS12930 PF02558 Ketopantoate reductase PanE/ApbA SA40_RS12935 PF03306 Alpha-acetolactate decarboxylase SA40_RS12940 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SA40_RS12940 PF00056 lactate/malate dehydrogenase, NAD binding domain SA40_RS12950 PF13520 Amino acid permease SA40_RS12955 PF00202 Aminotransferase class-III SA40_RS12965 PF00274 Fructose-bisphosphate aldolase class-I SA40_RS12970 PF06039 Malate:quinone oxidoreductase (Mqo) SA40_RS12980 PF00501 AMP-binding enzyme SA40_RS12980 PF13193 AMP-binding enzyme C-terminal domain SA40_RS12995 PF00732 GMC oxidoreductase SA40_RS12995 PF05199 GMC oxidoreductase SA40_RS13000 PF00171 Aldehyde dehydrogenase family SA40_RS13015 PF02028 BCCT, betaine/carnitine/choline family transporter SA40_RS13035 PF03477 ATP cone domain SA40_RS13035 PF13597 Anaerobic ribonucleoside-triphosphate reductase SA40_RS13040 PF03600 Citrate transporter SA40_RS13045 PF14824 Sirohaem biosynthesis protein central SA40_RS13050 PF00667 FAD binding domain SA40_RS13050 PF00258 Flavodoxin SA40_RS13050 PF00175 Oxidoreductase NAD-binding domain SA40_RS13060 PF00255 Glutathione peroxidase SA40_RS13085 PF00005 ABC transporter SA40_RS13090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SA40_RS13095 PF00486 Transcriptional regulatory protein, C terminal SA40_RS13095 PF00072 Response regulator receiver domain SA40_RS13110 PF00245 Alkaline phosphatase SA40_RS13115 PF01047 MarR family SA40_RS13125 PF17961 Bacterial Ig domain SA40_RS13125 PF00746 LPXTG cell wall anchor motif SA40_RS13125 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SA40_RS13125 PF04650 YSIRK type signal peptide SA40_RS13130 PF00027 Cyclic nucleotide-binding domain SA40_RS13130 PF13545 Crp-like helix-turn-helix domain SA40_RS13135 PF00696 Amino acid kinase family SA40_RS13140 PF13520 Amino acid permease SA40_RS13145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SA40_RS13145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SA40_RS13160 PF01316 Arginine repressor, DNA binding domain SA40_RS13160 PF02863 Arginine repressor, C-terminal domain SA40_RS13165 PF07504 Fungalysin/Thermolysin Propeptide Motif SA40_RS13165 PF03413 Peptidase propeptide and YPEB domain SA40_RS13165 PF01447 Thermolysin metallopeptidase, catalytic domain SA40_RS13165 PF02868 Thermolysin metallopeptidase, alpha-helical domain SA40_RS13180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SA40_RS13180 PF08279 HTH domain SA40_RS13180 PF05043 Mga helix-turn-helix domain SA40_RS13180 PF00874 PRD domain SA40_RS13185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SA40_RS13185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SA40_RS13185 PF02378 Phosphotransferase system, EIIC SA40_RS13190 PF01238 Phosphomannose isomerase type I SA40_RS13195 PF01061 ABC-2 type transporter SA40_RS13200 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SA40_RS13200 PF05257 CHAP domain SA40_RS13205 PF00550 Phosphopantetheine attachment site SA40_RS13205 PF00857 Isochorismatase family SA40_RS13210 PF01468 GA module SA40_RS13220 PF00534 Glycosyl transferases group 1 SA40_RS13225 PF07517 SecA DEAD-like domain SA40_RS13225 PF07516 SecA Wing and Scaffold domain SA40_RS13225 PF01043 SecA preprotein cross-linking domain SA40_RS13230 PF15432 Accessory Sec secretory system ASP3 SA40_RS13235 PF16929 Accessory Sec system GspB-transporter SA40_RS13240 PF16993 Accessory Sec system protein Asp1 SA40_RS13245 PF00344 SecY translocase SA40_RS13250 PF00746 LPXTG cell wall anchor motif SA40_RS13255 PF01613 Flavin reductase like domain SA40_RS13285 PF01613 Flavin reductase like domain SA40_RS13290 PF01625 Peptide methionine sulfoxide reductase SA40_RS13290 PF01641 SelR domain SA40_RS13305 PF13614 AAA domain SA40_RS13310 PF02706 Chain length determinant protein SA40_RS13315 PF00440 Bacterial regulatory proteins, tetR family SA40_RS13315 PF18665 Tetracyclin repressor-like, C-terminal domain SA40_RS13320 PF00535 Glycosyl transferase family 2 SA40_RS13330 PF01522 Polysaccharide deacetylase SA40_RS13335 PF01757 Acyltransferase family SA40_RS13345 PF04650 YSIRK type signal peptide SA40_RS13360 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SA40_RS13360 PF01502 Phosphoribosyl-AMP cyclohydrolase SA40_RS13365 PF00977 Histidine biosynthesis protein SA40_RS13370 PF00977 Histidine biosynthesis protein SA40_RS13375 PF00117 Glutamine amidotransferase class-I SA40_RS13380 PF00475 Imidazoleglycerol-phosphate dehydratase SA40_RS13385 PF00155 Aminotransferase class I and II SA40_RS13390 PF00815 Histidinol dehydrogenase SA40_RS13395 PF01634 ATP phosphoribosyltransferase SA40_RS13400 PF13393 Histidyl-tRNA synthetase SA40_RS13420 PF00005 ABC transporter SA40_RS13420 PF12558 ATP-binding cassette cobalt transporter SA40_RS13425 PF07155 ECF-type riboflavin transporter, S component SA40_RS13435 PF04264 YceI-like domain SA40_RS13440 PF08450 SMP-30/Gluconolactonase/LRE-like region SA40_RS13445 PF17773 UPF0176 acylphosphatase like domain SA40_RS13445 PF12368 Rhodanase C-terminal SA40_RS13445 PF00581 Rhodanese-like domain SA40_RS13450 PF01470 Pyroglutamyl peptidase SA40_RS13470 PF00939 Sodium:sulfate symporter transmembrane region SA40_RS13475 PF00892 EamA-like transporter family SA40_RS13485 PF03824 High-affinity nickel-transport protein SA40_RS13490 PF00797 N-acetyltransferase SA40_RS13500 PF00005 ABC transporter SA40_RS13505 PF02687 FtsX-like permease family SA40_RS13530 PF00313 'Cold-shock' DNA-binding domain SA40_RS13550 PF17762 HTH domain found in ParB protein SA40_RS13550 PF02195 ParB-like nuclease domain SA40_RS13555 PF02527 rRNA small subunit methyltransferase G SA40_RS13560 PF13932 GidA associated domain SA40_RS13560 PF01134 Glucose inhibited division protein A SA40_RS13565 PF10396 GTP-binding protein TrmE N-terminus SA40_RS13565 PF12631 MnmE helical domain SA40_RS13565 PF01926 50S ribosome-binding GTPase SA40_RS13570 PF00825 Ribonuclease P SA40_RS13575 PF00468 Ribosomal protein L34