locus-tag class description RU53_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix RU53_RS00005 PF11638 DnaA N-terminal domain RU53_RS00005 PF00308 Bacterial dnaA protein RU53_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain RU53_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain RU53_RS00010 PF02767 DNA polymerase III beta subunit, central domain RU53_RS00020 PF02463 RecF/RecN/SMC N terminal domain RU53_RS00025 PF01751 Toprim domain RU53_RS00025 PF00204 DNA gyrase B RU53_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus RU53_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A RU53_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller RU53_RS00035 PF01256 Carbohydrate kinase RU53_RS00040 PF00221 Aromatic amino acid lyase RU53_RS00045 PF02403 Seryl-tRNA synthetase N-terminal domain RU53_RS00045 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RU53_RS00060 PF00561 alpha/beta hydrolase fold RU53_RS00070 PF02272 DHHA1 domain RU53_RS00070 PF01368 DHH family RU53_RS00075 PF03948 Ribosomal protein L9, C-terminal domain RU53_RS00075 PF01281 Ribosomal protein L9, N-terminal domain RU53_RS00080 PF00772 DnaB-like helicase N terminal domain RU53_RS00080 PF03796 DnaB-like helicase C terminal domain RU53_RS00085 PF00709 Adenylosuccinate synthetase RU53_RS00100 PF00072 Response regulator receiver domain RU53_RS00100 PF00486 Transcriptional regulatory protein, C terminal RU53_RS00105 PF00512 His Kinase A (phospho-acceptor) domain RU53_RS00105 PF13426 PAS domain RU53_RS00105 PF00672 HAMP domain RU53_RS00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS00110 PF07435 YycH protein RU53_RS00120 PF00753 Metallo-beta-lactamase superfamily RU53_RS00125 PF02872 5'-nucleotidase, C-terminal domain RU53_RS00125 PF00149 Calcineurin-like phosphoesterase RU53_RS00130 PF02590 Predicted SPOUT methyltransferase RU53_RS00140 PF13610 DDE domain RU53_RS00145 PF05223 NTF2-like N-terminal transpeptidase domain RU53_RS00145 PF03717 Penicillin-binding Protein dimerisation domain RU53_RS00145 PF00905 Penicillin binding protein transpeptidase domain RU53_RS00150 PF01575 MaoC like domain RU53_RS00155 PF03009 Glycerophosphoryl diester phosphodiesterase family RU53_RS00200 PF00239 Resolvase, N terminal domain RU53_RS00200 PF13408 Recombinase zinc beta ribbon domain RU53_RS00200 PF07508 Recombinase RU53_RS00225 PF11867 Domain of unknown function (DUF3387) RU53_RS00225 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RU53_RS00225 PF18766 SWI2/SNF2 ATPase RU53_RS00230 PF01420 Type I restriction modification DNA specificity domain RU53_RS00235 PF02384 N-6 DNA Methylase RU53_RS00245 PF00872 Transposase, Mutator family RU53_RS00250 PF00583 Acetyltransferase (GNAT) family RU53_RS00255 PF01636 Phosphotransferase enzyme family RU53_RS00260 PF00872 Transposase, Mutator family RU53_RS00270 PF01555 DNA methylase RU53_RS00275 PF04851 Type III restriction enzyme, res subunit RU53_RS00290 PF00211 Adenylate and Guanylate cyclase catalytic domain RU53_RS00290 PF00672 HAMP domain RU53_RS00300 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS00305 PF01207 Dihydrouridine synthase (Dus) RU53_RS00320 PF01925 Sulfite exporter TauE/SafE RU53_RS00325 PF02583 Metal-sensitive transcriptional repressor RU53_RS00330 PF13686 DsrE/DsrF/DrsH-like family RU53_RS00335 PF00753 Metallo-beta-lactamase superfamily RU53_RS00355 PF01207 Dihydrouridine synthase (Dus) RU53_RS00385 PF00388 Phosphatidylinositol-specific phospholipase C, X domain RU53_RS00390 PF04507 Csa1 family RU53_RS00395 PF04507 Csa1 family RU53_RS00405 PF04507 Csa1 family RU53_RS00425 PF12833 Helix-turn-helix domain RU53_RS00430 PF07687 Peptidase dimerisation domain RU53_RS00430 PF01546 Peptidase family M20/M25/M40 RU53_RS00435 PF07690 Major Facilitator Superfamily RU53_RS00440 PF02690 Na+/Pi-cotransporter RU53_RS00445 PF06100 MCRA family RU53_RS00455 PF02652 L-lactate permease RU53_RS00460 PF03373 Octapeptide repeat RU53_RS00460 PF01476 LysM domain RU53_RS00460 PF04650 YSIRK type signal peptide RU53_RS00460 PF00746 LPXTG cell wall anchor motif RU53_RS00460 PF02216 B domain RU53_RS00470 PF01032 FecCD transport family RU53_RS00475 PF01032 FecCD transport family RU53_RS00480 PF01497 Periplasmic binding protein RU53_RS00485 PF00291 Pyridoxal-phosphate dependent enzyme RU53_RS00490 PF02423 Ornithine cyclodeaminase/mu-crystallin family RU53_RS00495 PF04183 IucA / IucC family RU53_RS00495 PF06276 Ferric iron reductase FhuF-like transporter RU53_RS00500 PF00083 Sugar (and other) transporter RU53_RS00500 PF07690 Major Facilitator Superfamily RU53_RS00505 PF06276 Ferric iron reductase FhuF-like transporter RU53_RS00505 PF04183 IucA / IucC family RU53_RS00510 PF04183 IucA / IucC family RU53_RS00510 PF06276 Ferric iron reductase FhuF-like transporter RU53_RS00515 PF03328 HpcH/HpaI aldolase/citrate lyase family RU53_RS00520 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RU53_RS00520 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RU53_RS00525 PF02195 ParB-like nuclease domain RU53_RS00555 PF01370 NAD dependent epimerase/dehydratase family RU53_RS00560 PF02397 Bacterial sugar transferase RU53_RS00565 PF00534 Glycosyl transferases group 1 RU53_RS00580 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RU53_RS00580 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RU53_RS00590 PF07702 UTRA domain RU53_RS00590 PF00392 Bacterial regulatory proteins, gntR family RU53_RS00600 PF01048 Phosphorylase superfamily RU53_RS00605 PF07690 Major Facilitator Superfamily RU53_RS00610 PF01791 DeoC/LacD family aldolase RU53_RS00615 PF01676 Metalloenzyme superfamily RU53_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS00630 PF00005 ABC transporter RU53_RS00645 PF02872 5'-nucleotidase, C-terminal domain RU53_RS00645 PF00149 Calcineurin-like phosphoesterase RU53_RS00660 PF00465 Iron-containing alcohol dehydrogenase RU53_RS00660 PF00171 Aldehyde dehydrogenase family RU53_RS00665 PF02706 Chain length determinant protein RU53_RS00670 PF13614 AAA domain RU53_RS00680 PF02719 Polysaccharide biosynthesis protein RU53_RS00685 PF08485 Polysaccharide biosynthesis protein C-terminal RU53_RS00685 PF02719 Polysaccharide biosynthesis protein RU53_RS00690 PF01370 NAD dependent epimerase/dehydratase family RU53_RS00695 PF02350 UDP-N-acetylglucosamine 2-epimerase RU53_RS00700 PF00132 Bacterial transferase hexapeptide (six repeats) RU53_RS00725 PF02397 Bacterial sugar transferase RU53_RS00735 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RU53_RS00735 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RU53_RS00735 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RU53_RS00740 PF02350 UDP-N-acetylglucosamine 2-epimerase RU53_RS00745 PF03992 Antibiotic biosynthesis monooxygenase RU53_RS00750 PF04304 Protein of unknown function (DUF454) RU53_RS00755 PF00171 Aldehyde dehydrogenase family RU53_RS00760 PF01545 Cation efflux family RU53_RS00760 PF16916 Dimerisation domain of Zinc Transporter RU53_RS00775 PF00005 ABC transporter RU53_RS00785 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS00790 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU53_RS00790 PF02770 Acyl-CoA dehydrogenase, middle domain RU53_RS00790 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU53_RS00795 PF10057 Uncharacterized conserved protein (DUF2294) RU53_RS00800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU53_RS00800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU53_RS00810 PF13193 AMP-binding enzyme C-terminal domain RU53_RS00810 PF00668 Condensation domain RU53_RS00810 PF00550 Phosphopantetheine attachment site RU53_RS00810 PF00975 Thioesterase domain RU53_RS00810 PF00501 AMP-binding enzyme RU53_RS00825 PF00696 Amino acid kinase family RU53_RS00830 PF01960 ArgJ family RU53_RS00835 PF01118 Semialdehyde dehydrogenase, NAD binding domain RU53_RS00835 PF02774 Semialdehyde dehydrogenase, dimerisation domain RU53_RS00840 PF00202 Aminotransferase class-III RU53_RS00845 PF05525 Branched-chain amino acid transport protein RU53_RS00850 PF00857 Isochorismatase family RU53_RS00855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RU53_RS00855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RU53_RS00855 PF00205 Thiamine pyrophosphate enzyme, central domain RU53_RS00865 PF02378 Phosphotransferase system, EIIC RU53_RS00865 PF00367 phosphotransferase system, EIIB RU53_RS00865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RU53_RS00880 PF02378 Phosphotransferase system, EIIC RU53_RS00880 PF00367 phosphotransferase system, EIIB RU53_RS00885 PF01418 Helix-turn-helix domain, rpiR family RU53_RS00885 PF01380 SIS domain RU53_RS00895 PF12008 Type I restriction and modification enzyme - subunit R C terminal RU53_RS00895 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) RU53_RS00895 PF18766 SWI2/SNF2 ATPase RU53_RS00915 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RU53_RS00915 PF00005 ABC transporter RU53_RS00920 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS00925 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS00925 PF12911 N-terminal TM domain of oligopeptide transport permease C RU53_RS00940 PF04507 Csa1 family RU53_RS00945 PF02525 Flavodoxin-like fold RU53_RS00950 PF01551 Peptidase family M23 RU53_RS00950 PF08460 Bacterial SH3 domain RU53_RS00955 PF03459 TOBE domain RU53_RS00955 PF17912 MalK OB fold domain RU53_RS00955 PF00005 ABC transporter RU53_RS00965 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS00970 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS00980 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RU53_RS00980 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RU53_RS00985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RU53_RS00985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RU53_RS00995 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family RU53_RS01000 PF07690 Major Facilitator Superfamily RU53_RS01005 PF12833 Helix-turn-helix domain RU53_RS01005 PF00072 Response regulator receiver domain RU53_RS01010 PF06580 Histidine kinase RU53_RS01020 PF01228 Glycine radical RU53_RS01020 PF02901 Pyruvate formate lyase-like RU53_RS01025 PF04055 Radical SAM superfamily RU53_RS01045 PF04022 Staphylocoagulase repeat RU53_RS01045 PF08764 Staphylococcus aureus coagulase RU53_RS01060 PF00108 Thiolase, N-terminal domain RU53_RS01060 PF02803 Thiolase, C-terminal domain RU53_RS01065 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RU53_RS01065 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RU53_RS01070 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU53_RS01070 PF02770 Acyl-CoA dehydrogenase, middle domain RU53_RS01070 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RU53_RS01075 PF13193 AMP-binding enzyme C-terminal domain RU53_RS01075 PF00501 AMP-binding enzyme RU53_RS01080 PF01144 Coenzyme A transferase RU53_RS01090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RU53_RS01095 PF04343 Protein of unknown function, DUF488 RU53_RS01105 PF00970 Oxidoreductase FAD-binding domain RU53_RS01105 PF00042 Globin RU53_RS01105 PF00175 Oxidoreductase NAD-binding domain RU53_RS01115 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RU53_RS01115 PF00056 lactate/malate dehydrogenase, NAD binding domain RU53_RS01125 PF02378 Phosphotransferase system, EIIC RU53_RS01125 PF00367 phosphotransferase system, EIIB RU53_RS01125 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RU53_RS01130 PF01156 Inosine-uridine preferring nucleoside hydrolase RU53_RS01150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RU53_RS01155 PF03611 PTS system sugar-specific permease component RU53_RS01160 PF00107 Zinc-binding dehydrogenase RU53_RS01160 PF08240 Alcohol dehydrogenase GroES-like domain RU53_RS01170 PF00107 Zinc-binding dehydrogenase RU53_RS01170 PF08240 Alcohol dehydrogenase GroES-like domain RU53_RS01175 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RU53_RS01180 PF00107 Zinc-binding dehydrogenase RU53_RS01180 PF08240 Alcohol dehydrogenase GroES-like domain RU53_RS01185 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RU53_RS01190 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RU53_RS01195 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RU53_RS01200 PF00107 Zinc-binding dehydrogenase RU53_RS01200 PF08240 Alcohol dehydrogenase GroES-like domain RU53_RS01205 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RU53_RS01210 PF00535 Glycosyl transferase family 2 RU53_RS01210 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 RU53_RS01215 PF04405 Domain of Unknown function (DUF542) RU53_RS01215 PF01814 Hemerythrin HHE cation binding domain RU53_RS01220 PF06580 Histidine kinase RU53_RS01220 PF07694 5TMR of 5TMR-LYT RU53_RS01220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS01225 PF04397 LytTr DNA-binding domain RU53_RS01225 PF00072 Response regulator receiver domain RU53_RS01230 PF03788 LrgA family RU53_RS01235 PF04172 LrgB-like family RU53_RS01240 PF00115 Cytochrome C and Quinol oxidase polypeptide I RU53_RS01245 PF00392 Bacterial regulatory proteins, gntR family RU53_RS01245 PF00155 Aminotransferase class I and II RU53_RS01250 PF02378 Phosphotransferase system, EIIC RU53_RS01250 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RU53_RS01250 PF00367 phosphotransferase system, EIIB RU53_RS01255 PF00232 Glycosyl hydrolase family 1 RU53_RS01265 PF13649 Methyltransferase domain RU53_RS01275 PF00294 pfkB family carbohydrate kinase RU53_RS01280 PF05025 RbsD / FucU transport protein family RU53_RS01285 PF06800 Sugar transport protein RU53_RS01290 PF00356 Bacterial regulatory proteins, lacI family RU53_RS01290 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RU53_RS01305 PF07690 Major Facilitator Superfamily RU53_RS01310 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family RU53_RS01315 PF01551 Peptidase family M23 RU53_RS01320 PF00005 ABC transporter RU53_RS01340 PF05257 CHAP domain RU53_RS01340 PF01476 LysM domain RU53_RS01345 PF06013 Proteins of 100 residues with WXG RU53_RS01355 PF10661 WXG100 protein secretion system (Wss), protein EssA RU53_RS01360 PF08817 WXG100 protein secretion system (Wss), protein YukD RU53_RS01365 PF10140 WXG100 protein secretion system (Wss), protein YukC RU53_RS01370 PF01580 FtsK/SpoIIIE family RU53_RS01370 PF12538 DNA transporter RU53_RS01415 PF04634 Protein of unknown function, DUF600 RU53_RS01420 PF04634 Protein of unknown function, DUF600 RU53_RS01425 PF04634 Protein of unknown function, DUF600 RU53_RS01430 PF04634 Protein of unknown function, DUF600 RU53_RS01435 PF04634 Protein of unknown function, DUF600 RU53_RS01455 PF05525 Branched-chain amino acid transport protein RU53_RS01460 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) RU53_RS01470 PF02687 FtsX-like permease family RU53_RS01475 PF00005 ABC transporter RU53_RS01490 PF04227 Indigoidine synthase A like protein RU53_RS01495 PF01773 Na+ dependent nucleoside transporter N-terminus RU53_RS01495 PF07662 Na+ dependent nucleoside transporter C-terminus RU53_RS01500 PF00474 Sodium:solute symporter family RU53_RS01505 PF00701 Dihydrodipicolinate synthetase family RU53_RS01510 PF00480 ROK family RU53_RS01515 PF01418 Helix-turn-helix domain, rpiR family RU53_RS01515 PF01380 SIS domain RU53_RS01520 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase RU53_RS01525 PF07670 Nucleoside recognition RU53_RS01530 PF04650 YSIRK type signal peptide RU53_RS01540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RU53_RS01550 PF00296 Luciferase-like monooxygenase RU53_RS01555 PF01597 Glycine cleavage H-protein RU53_RS01560 PF01661 Macro domain RU53_RS01570 PF10437 Bacterial lipoate protein ligase C-terminus RU53_RS01570 PF03099 Biotin/lipoate A/B protein ligase family RU53_RS01575 PF16363 GDP-mannose 4,6 dehydratase RU53_RS01580 PF03611 PTS system sugar-specific permease component RU53_RS01590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RU53_RS01595 PF03123 CAT RNA binding domain RU53_RS01595 PF00874 PRD domain RU53_RS01605 PF01554 MatE RU53_RS01615 PF07690 Major Facilitator Superfamily RU53_RS01620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RU53_RS01625 PF00296 Luciferase-like monooxygenase RU53_RS01630 PF03358 NADPH-dependent FMN reductase RU53_RS01635 PF03601 Conserved hypothetical protein 698 RU53_RS01645 PF13302 Acetyltransferase (GNAT) domain RU53_RS01650 PF09375 Imelysin RU53_RS01655 PF04261 Dyp-type peroxidase family RU53_RS01660 PF03239 Iron permease FTR1 family RU53_RS01665 PF00902 Sec-independent protein translocase protein (TatC) RU53_RS01670 PF02416 mttA/Hcf106 family RU53_RS01680 PF01381 Helix-turn-helix RU53_RS01690 PF00005 ABC transporter RU53_RS01710 PF02803 Thiolase, C-terminal domain RU53_RS01710 PF00108 Thiolase, N-terminal domain RU53_RS01720 PF08267 Cobalamin-independent synthase, N-terminal domain RU53_RS01720 PF01717 Cobalamin-independent synthase, Catalytic domain RU53_RS01725 PF02574 Homocysteine S-methyltransferase RU53_RS01725 PF02219 Methylenetetrahydrofolate reductase RU53_RS01730 PF01053 Cys/Met metabolism PLP-dependent enzyme RU53_RS01735 PF01053 Cys/Met metabolism PLP-dependent enzyme RU53_RS01740 PF17762 HTH domain found in ParB protein RU53_RS01740 PF02195 ParB-like nuclease domain RU53_RS01745 PF00924 Mechanosensitive ion channel RU53_RS01750 PF06107 Bacterial protein of unknown function (DUF951) RU53_RS01755 PF06071 Protein of unknown function (DUF933) RU53_RS01755 PF01926 50S ribosome-binding GTPase RU53_RS01765 PF01250 Ribosomal protein S6 RU53_RS01770 PF00436 Single-strand binding protein family RU53_RS01775 PF01084 Ribosomal protein S18 RU53_RS01785 PF02899 Phage integrase, N-terminal SAM-like domain RU53_RS01785 PF00589 Phage integrase family RU53_RS01795 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS01845 PF13192 Thioredoxin domain RU53_RS01845 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS01850 PF10417 C-terminal domain of 1-Cys peroxiredoxin RU53_RS01850 PF00578 AhpC/TSA family RU53_RS01855 PF00881 Nitroreductase family RU53_RS01860 PF00375 Sodium:dicarboxylate symporter family RU53_RS01880 PF11181 Heat induced stress protein YflT RU53_RS01890 PF00860 Permease family RU53_RS01895 PF00571 CBS domain RU53_RS01895 PF00478 IMP dehydrogenase / GMP reductase domain RU53_RS01900 PF00117 Glutamine amidotransferase class-I RU53_RS01900 PF00958 GMP synthase C terminal domain RU53_RS01935 PF04439 Streptomycin adenylyltransferase RU53_RS01965 PF06993 Protein of unknown function (DUF1304) RU53_RS01975 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS01975 PF09199 Staphylococcal superantigen-like OB-fold domain RU53_RS01980 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS01980 PF09199 Staphylococcal superantigen-like OB-fold domain RU53_RS01985 PF09199 Staphylococcal superantigen-like OB-fold domain RU53_RS01985 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS01995 PF09199 Staphylococcal superantigen-like OB-fold domain RU53_RS01995 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS02000 PF09199 Staphylococcal superantigen-like OB-fold domain RU53_RS02000 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS02010 PF09199 Staphylococcal superantigen-like OB-fold domain RU53_RS02010 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS02015 PF09199 Staphylococcal superantigen-like OB-fold domain RU53_RS02015 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS02020 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS02020 PF09199 Staphylococcal superantigen-like OB-fold domain RU53_RS02025 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS02025 PF09199 Staphylococcal superantigen-like OB-fold domain RU53_RS02030 PF02384 N-6 DNA Methylase RU53_RS02030 PF12161 HsdM N-terminal domain RU53_RS02040 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS02040 PF09199 Staphylococcal superantigen-like OB-fold domain RU53_RS02055 PF04507 Csa1 family RU53_RS02060 PF04507 Csa1 family RU53_RS02065 PF04507 Csa1 family RU53_RS02070 PF04507 Csa1 family RU53_RS02075 PF04507 Csa1 family RU53_RS02080 PF04507 Csa1 family RU53_RS02085 PF04507 Csa1 family RU53_RS02090 PF04507 Csa1 family RU53_RS02095 PF04507 Csa1 family RU53_RS02100 PF04507 Csa1 family RU53_RS02105 PF04507 Csa1 family RU53_RS02110 PF04507 Csa1 family RU53_RS02115 PF04507 Csa1 family RU53_RS02120 PF04507 Csa1 family RU53_RS02125 PF04507 Csa1 family RU53_RS02155 PF02492 CobW/HypB/UreG, nucleotide-binding domain RU53_RS02155 PF07683 Cobalamin synthesis protein cobW C-terminal domain RU53_RS02165 PF00361 Proton-conducting membrane transporter RU53_RS02165 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RU53_RS02170 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) RU53_RS02175 PF10057 Uncharacterized conserved protein (DUF2294) RU53_RS02190 PF12146 Serine aminopeptidase, S33 RU53_RS02200 PF00209 Sodium:neurotransmitter symporter family RU53_RS02205 PF00291 Pyridoxal-phosphate dependent enzyme RU53_RS02210 PF01053 Cys/Met metabolism PLP-dependent enzyme RU53_RS02215 PF09383 NIL domain RU53_RS02215 PF00005 ABC transporter RU53_RS02220 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS02225 PF03180 NLPA lipoprotein RU53_RS02230 PF05257 CHAP domain RU53_RS02230 PF01476 LysM domain RU53_RS02260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU53_RS02260 PF03466 LysR substrate binding domain RU53_RS02265 PF04898 Glutamate synthase central domain RU53_RS02265 PF00310 Glutamine amidotransferases class-II RU53_RS02265 PF01493 GXGXG motif RU53_RS02265 PF01645 Conserved region in glutamate synthase RU53_RS02270 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS02270 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RU53_RS02285 PF02378 Phosphotransferase system, EIIC RU53_RS02285 PF00367 phosphotransferase system, EIIB RU53_RS02290 PF16657 Maltogenic Amylase, C-terminal domain RU53_RS02290 PF00128 Alpha amylase, catalytic domain RU53_RS02295 PF00392 Bacterial regulatory proteins, gntR family RU53_RS02295 PF07702 UTRA domain RU53_RS02310 PF12169 DNA polymerase III subunits gamma and tau domain III RU53_RS02315 PF02575 YbaB/EbfC DNA-binding family RU53_RS02320 PF13662 Toprim domain RU53_RS02320 PF02132 RecR protein RU53_RS02345 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RU53_RS02345 PF01276 Orn/Lys/Arg decarboxylase, major domain RU53_RS02350 PF02223 Thymidylate kinase RU53_RS02355 PF06153 Cyclic-di-AMP receptor RU53_RS02365 PF09115 DNA polymerase III, delta subunit, C terminal RU53_RS02370 PF04468 PSP1 C-terminal conserved region RU53_RS02375 PF06156 Initiation control protein YabA RU53_RS02380 PF05175 Methyltransferase small domain RU53_RS02385 PF01541 GIY-YIG catalytic domain RU53_RS02390 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RU53_RS02400 PF01588 Putative tRNA binding domain RU53_RS02400 PF09334 tRNA synthetases class I (M) RU53_RS02400 PF08264 Anticodon-binding domain of tRNA RU53_RS02405 PF01026 TatD related DNase RU53_RS02410 PF13331 Domain of unknown function (DUF4093) RU53_RS02410 PF01751 Toprim domain RU53_RS02415 PF00398 Ribosomal RNA adenine dimethylase RU53_RS02420 PF06257 Biofilm formation stimulator VEG RU53_RS02425 PF00288 GHMP kinases N terminal domain RU53_RS02425 PF08544 GHMP kinases C terminal RU53_RS02430 PF09182 Bacterial purine repressor, N-terminal RU53_RS02430 PF00156 Phosphoribosyl transferase domain RU53_RS02435 PF01042 Endoribonuclease L-PSP RU53_RS02440 PF04026 SpoVG RU53_RS02450 PF00132 Bacterial transferase hexapeptide (six repeats) RU53_RS02450 PF00483 Nucleotidyl transferase RU53_RS02455 PF14572 Phosphoribosyl synthetase-associated domain RU53_RS02455 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RU53_RS02460 PF01386 Ribosomal L25p family RU53_RS02460 PF14693 Ribosomal protein TL5, C-terminal domain RU53_RS02465 PF01195 Peptidyl-tRNA hydrolase RU53_RS02470 PF00271 Helicase conserved C-terminal domain RU53_RS02470 PF02559 CarD-like/TRCF domain RU53_RS02470 PF00270 DEAD/DEAH box helicase RU53_RS02470 PF17757 UvrB interaction domain RU53_RS02470 PF03461 TRCF domain RU53_RS02475 PF14667 Polysaccharide biosynthesis C-terminal domain RU53_RS02475 PF01943 Polysaccharide biosynthesis protein RU53_RS02480 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RU53_RS02480 PF03819 MazG nucleotide pyrophosphohydrolase domain RU53_RS02485 PF01479 S4 domain RU53_RS02495 PF00575 S1 RNA binding domain RU53_RS02500 PF11734 TilS substrate C-terminal domain RU53_RS02500 PF01171 PP-loop family RU53_RS02505 PF00156 Phosphoribosyl transferase domain RU53_RS02510 PF01434 Peptidase family M41 RU53_RS02510 PF06480 FtsH Extracellular RU53_RS02510 PF17862 AAA+ lid domain RU53_RS02510 PF00004 ATPase family associated with various cellular activities (AAA) RU53_RS02515 PF01430 Hsp33 protein RU53_RS02520 PF00291 Pyridoxal-phosphate dependent enzyme RU53_RS02525 PF00809 Pterin binding enzyme RU53_RS02530 PF02152 Dihydroneopterin aldolase RU53_RS02535 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RU53_RS02545 PF00152 tRNA synthetases class II (D, K and N) RU53_RS02545 PF01336 OB-fold nucleic acid binding domain RU53_RS02630 PF00155 Aminotransferase class I and II RU53_RS02630 PF00392 Bacterial regulatory proteins, gntR family RU53_RS02635 PF01680 SOR/SNZ family RU53_RS02640 PF01174 SNO glutamine amidotransferase family RU53_RS02645 PF01773 Na+ dependent nucleoside transporter N-terminus RU53_RS02645 PF07662 Na+ dependent nucleoside transporter C-terminus RU53_RS02650 PF05848 CtsR N-terminal HTH domain RU53_RS02650 PF17727 CtsR C-terminal dimerization domain RU53_RS02655 PF02151 UvrB/uvrC motif RU53_RS02660 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain RU53_RS02665 PF00004 ATPase family associated with various cellular activities (AAA) RU53_RS02665 PF07724 AAA domain (Cdc48 subfamily) RU53_RS02665 PF02861 Clp amino terminal domain, pathogenicity island component RU53_RS02665 PF10431 C-terminal, D2-small domain, of ClpB protein RU53_RS02665 PF17871 AAA lid domain RU53_RS02675 PF18073 Rubredoxin metal binding domain RU53_RS02685 PF00749 tRNA synthetases class I (E and Q), catalytic domain RU53_RS02690 PF00132 Bacterial transferase hexapeptide (six repeats) RU53_RS02695 PF01406 tRNA synthetases class I (C) catalytic domain RU53_RS02695 PF09190 DALR domain RU53_RS02700 PF00636 Ribonuclease III domain RU53_RS02705 PF08032 RNA 2'-O ribose methyltransferase substrate binding RU53_RS02705 PF00588 SpoU rRNA Methylase family RU53_RS02720 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RU53_RS02725 PF00467 KOW motif RU53_RS02725 PF02357 Transcription termination factor nusG RU53_RS02730 PF00298 Ribosomal protein L11, RNA binding domain RU53_RS02730 PF03946 Ribosomal protein L11, N-terminal domain RU53_RS02735 PF00687 Ribosomal protein L1p/L10e family RU53_RS02740 PF00466 Ribosomal protein L10 RU53_RS02745 PF16320 Ribosomal protein L7/L12 dimerisation domain RU53_RS02745 PF00542 Ribosomal protein L7/L12 C-terminal domain RU53_RS02750 PF05175 Methyltransferase small domain RU53_RS02755 PF10385 RNA polymerase beta subunit external 1 domain RU53_RS02755 PF04563 RNA polymerase beta subunit RU53_RS02755 PF04561 RNA polymerase Rpb2, domain 2 RU53_RS02755 PF04565 RNA polymerase Rpb2, domain 3 RU53_RS02755 PF00562 RNA polymerase Rpb2, domain 6 RU53_RS02755 PF04560 RNA polymerase Rpb2, domain 7 RU53_RS02760 PF04997 RNA polymerase Rpb1, domain 1 RU53_RS02760 PF00623 RNA polymerase Rpb1, domain 2 RU53_RS02760 PF04983 RNA polymerase Rpb1, domain 3 RU53_RS02760 PF05000 RNA polymerase Rpb1, domain 4 RU53_RS02760 PF04998 RNA polymerase Rpb1, domain 5 RU53_RS02765 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RU53_RS02770 PF00164 Ribosomal protein S12/S23 RU53_RS02775 PF00177 Ribosomal protein S7p/S5e RU53_RS02780 PF03144 Elongation factor Tu domain 2 RU53_RS02780 PF00009 Elongation factor Tu GTP binding domain RU53_RS02780 PF03764 Elongation factor G, domain IV RU53_RS02780 PF14492 Elongation Factor G, domain II RU53_RS02780 PF00679 Elongation factor G C-terminus RU53_RS02785 PF03143 Elongation factor Tu C-terminal domain RU53_RS02785 PF00009 Elongation factor Tu GTP binding domain RU53_RS02785 PF03144 Elongation factor Tu domain 2 RU53_RS02790 PF01546 Peptidase family M20/M25/M40 RU53_RS02790 PF07687 Peptidase dimerisation domain RU53_RS02795 PF00155 Aminotransferase class I and II RU53_RS02800 PF01965 DJ-1/PfpI family RU53_RS02805 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RU53_RS02805 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RU53_RS02810 PF01370 NAD dependent epimerase/dehydratase family RU53_RS02815 PF01063 Amino-transferase class IV RU53_RS02825 PF01712 Deoxynucleoside kinase RU53_RS02830 PF01712 Deoxynucleoside kinase RU53_RS02835 PF14437 MafB19-like deaminase RU53_RS02845 PF03358 NADPH-dependent FMN reductase RU53_RS02850 PF17210 SdrD B-like domain RU53_RS02850 PF00746 LPXTG cell wall anchor motif RU53_RS02850 PF17961 Bacterial Ig domain RU53_RS02850 PF04650 YSIRK type signal peptide RU53_RS02850 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RU53_RS02855 PF04650 YSIRK type signal peptide RU53_RS02855 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RU53_RS02855 PF17961 Bacterial Ig domain RU53_RS02855 PF00746 LPXTG cell wall anchor motif RU53_RS02855 PF17210 SdrD B-like domain RU53_RS02860 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RU53_RS02860 PF17961 Bacterial Ig domain RU53_RS02860 PF00746 LPXTG cell wall anchor motif RU53_RS02860 PF17210 SdrD B-like domain RU53_RS02860 PF04650 YSIRK type signal peptide RU53_RS02865 PF00534 Glycosyl transferases group 1 RU53_RS02875 PF02649 Type I GTP cyclohydrolase folE2 RU53_RS02880 PF02585 GlcNAc-PI de-N-acetylase RU53_RS02890 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RU53_RS02895 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RU53_RS02900 PF01380 SIS domain RU53_RS02910 PF07690 Major Facilitator Superfamily RU53_RS02915 PF13193 AMP-binding enzyme C-terminal domain RU53_RS02915 PF00501 AMP-binding enzyme RU53_RS02920 PF02803 Thiolase, C-terminal domain RU53_RS02920 PF00108 Thiolase, N-terminal domain RU53_RS02935 PF17412 Family of unknown function RU53_RS02940 PF08543 Phosphomethylpyrimidine kinase RU53_RS02945 PF03167 Uracil DNA glycosylase superfamily RU53_RS02955 PF04241 Protein of unknown function (DUF423) RU53_RS02975 PF06778 Chlorite dismutase RU53_RS02980 PF01515 Phosphate acetyl/butaryl transferase RU53_RS02985 PF03099 Biotin/lipoate A/B protein ligase family RU53_RS02990 PF00288 GHMP kinases N terminal domain RU53_RS02990 PF08544 GHMP kinases C terminal RU53_RS03000 PF08544 GHMP kinases C terminal RU53_RS03000 PF00288 GHMP kinases N terminal domain RU53_RS03005 PF07293 Protein of unknown function (DUF1450) RU53_RS03010 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS03010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU53_RS03015 PF02796 Helix-turn-helix domain of resolvase RU53_RS03015 PF00239 Resolvase, N terminal domain RU53_RS03095 PF01695 IstB-like ATP binding protein RU53_RS03200 PF04466 Phage terminase large subunit RU53_RS03200 PF17288 Terminase RNAseH like domain RU53_RS03305 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RU53_RS03305 PF13457 GW (Gly-Tryp) dipeptide domain RU53_RS03325 PF08460 Bacterial SH3 domain RU53_RS03325 PF05257 CHAP domain RU53_RS03325 PF01510 N-acetylmuramoyl-L-alanine amidase RU53_RS03345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU53_RS03345 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS03405 PF00248 Aldo/keto reductase family RU53_RS03410 PF03358 NADPH-dependent FMN reductase RU53_RS03420 PF01966 HD domain RU53_RS03425 PF08741 YwhD family RU53_RS03430 PF08240 Alcohol dehydrogenase GroES-like domain RU53_RS03430 PF00107 Zinc-binding dehydrogenase RU53_RS03445 PF00750 tRNA synthetases class I (R) RU53_RS03445 PF05746 DALR anticodon binding domain RU53_RS03445 PF03485 Arginyl tRNA synthetase N terminal domain RU53_RS03455 PF01497 Periplasmic binding protein RU53_RS03460 PF01032 FecCD transport family RU53_RS03465 PF13419 Haloacid dehalogenase-like hydrolase RU53_RS03470 PF00561 alpha/beta hydrolase fold RU53_RS03485 PF12697 Alpha/beta hydrolase family RU53_RS03510 PF00589 Phage integrase family RU53_RS03515 PF13244 Domain of unknown function (DUF4040) RU53_RS03515 PF00361 Proton-conducting membrane transporter RU53_RS03515 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RU53_RS03520 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RU53_RS03525 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RU53_RS03530 PF00361 Proton-conducting membrane transporter RU53_RS03535 PF01899 Na+/H+ ion antiporter subunit RU53_RS03540 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RU53_RS03545 PF03334 Na+/H+ antiporter subunit RU53_RS03550 PF00999 Sodium/hydrogen exchanger family RU53_RS03555 PF01297 Zinc-uptake complex component A periplasmic RU53_RS03560 PF00950 ABC 3 transport family RU53_RS03565 PF00005 ABC transporter RU53_RS03570 PF18357 Diphteria toxin repressor SH3 domain RU53_RS03570 PF02742 Iron dependent repressor, metal binding and dimerisation domain RU53_RS03570 PF01325 Iron dependent repressor, N-terminal DNA binding domain RU53_RS03580 PF03808 Glycosyl transferase WecB/TagA/CpsF family RU53_RS03585 PF00005 ABC transporter RU53_RS03590 PF01061 ABC-2 type transporter RU53_RS03595 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RU53_RS03600 PF00535 Glycosyl transferase family 2 RU53_RS03605 PF01467 Cytidylyltransferase-like RU53_RS03610 PF07943 Penicillin-binding protein 5, C-terminal domain RU53_RS03610 PF00768 D-alanyl-D-alanine carboxypeptidase RU53_RS03615 PF00664 ABC transporter transmembrane region RU53_RS03615 PF00005 ABC transporter RU53_RS03620 PF07662 Na+ dependent nucleoside transporter C-terminus RU53_RS03620 PF01773 Na+ dependent nucleoside transporter N-terminus RU53_RS03630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RU53_RS03630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RU53_RS03635 PF00005 ABC transporter RU53_RS03640 PF01032 FecCD transport family RU53_RS03645 PF01032 FecCD transport family RU53_RS03650 PF02733 Dak1 domain RU53_RS03655 PF02734 DAK2 domain RU53_RS03660 PF03610 PTS system fructose IIA component RU53_RS03695 PF01370 NAD dependent epimerase/dehydratase family RU53_RS03700 PF00072 Response regulator receiver domain RU53_RS03700 PF00486 Transcriptional regulatory protein, C terminal RU53_RS03705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS03710 PF00005 ABC transporter RU53_RS03715 PF02687 FtsX-like permease family RU53_RS03720 PF01865 Protein of unknown function DUF47 RU53_RS03725 PF01384 Phosphate transporter family RU53_RS03730 PF05257 CHAP domain RU53_RS03730 PF01476 LysM domain RU53_RS03740 PF12833 Helix-turn-helix domain RU53_RS03740 PF02311 AraC-like ligand binding domain RU53_RS03750 PF01709 Transcriptional regulator RU53_RS03770 PF03466 LysR substrate binding domain RU53_RS03770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU53_RS03785 PF07690 Major Facilitator Superfamily RU53_RS03790 PF04306 Protein of unknown function (DUF456) RU53_RS03815 PF13302 Acetyltransferase (GNAT) domain RU53_RS03820 PF03641 Possible lysine decarboxylase RU53_RS03825 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RU53_RS03835 PF02673 Bacitracin resistance protein BacA RU53_RS03840 PF00005 ABC transporter RU53_RS03840 PF00664 ABC transporter transmembrane region RU53_RS03845 PF00005 ABC transporter RU53_RS03845 PF00664 ABC transporter transmembrane region RU53_RS03850 PF01047 MarR family RU53_RS03855 PF02492 CobW/HypB/UreG, nucleotide-binding domain RU53_RS03855 PF07683 Cobalamin synthesis protein cobW C-terminal domain RU53_RS03860 PF00248 Aldo/keto reductase family RU53_RS03870 PF00939 Sodium:sulfate symporter transmembrane region RU53_RS03875 PF03441 FAD binding domain of DNA photolyase RU53_RS03875 PF00875 DNA photolyase RU53_RS03895 PF07690 Major Facilitator Superfamily RU53_RS03905 PF04073 Aminoacyl-tRNA editing domain RU53_RS03910 PF00455 DeoR C terminal sensor domain RU53_RS03910 PF08220 DeoR-like helix-turn-helix domain RU53_RS03915 PF00294 pfkB family carbohydrate kinase RU53_RS03920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RU53_RS03920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RU53_RS03930 PF01979 Amidohydrolase family RU53_RS03935 PF03471 Transporter associated domain RU53_RS03935 PF00571 CBS domain RU53_RS03935 PF01595 Cyclin M transmembrane N-terminal domain RU53_RS03940 PF00248 Aldo/keto reductase family RU53_RS03945 PF00535 Glycosyl transferase family 2 RU53_RS03950 PF00512 His Kinase A (phospho-acceptor) domain RU53_RS03950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS03955 PF00486 Transcriptional regulatory protein, C terminal RU53_RS03955 PF00072 Response regulator receiver domain RU53_RS03975 PF04055 Radical SAM superfamily RU53_RS03980 PF01242 6-pyruvoyl tetrahydropterin synthase RU53_RS03985 PF06508 Queuosine biosynthesis protein QueC RU53_RS03990 PF00591 Glycosyl transferase family, a/b domain RU53_RS03990 PF02885 Glycosyl transferase family, helical bundle domain RU53_RS03990 PF00117 Glutamine amidotransferase class-I RU53_RS03995 PF00425 chorismate binding enzyme RU53_RS03995 PF04715 Anthranilate synthase component I, N terminal region RU53_RS04020 PF00884 Sulfatase RU53_RS04030 PF12848 ABC transporter RU53_RS04030 PF16326 ABC transporter C-terminal domain RU53_RS04030 PF00005 ABC transporter RU53_RS04035 PF00271 Helicase conserved C-terminal domain RU53_RS04035 PF09382 RQC domain RU53_RS04035 PF00570 HRDC domain RU53_RS04035 PF00270 DEAD/DEAH box helicase RU53_RS04035 PF16124 RecQ zinc-binding RU53_RS04040 PF00005 ABC transporter RU53_RS04040 PF00571 CBS domain RU53_RS04045 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS04050 PF00155 Aminotransferase class I and II RU53_RS04055 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) RU53_RS04065 PF00781 Diacylglycerol kinase catalytic domain RU53_RS04075 PF00854 POT family RU53_RS04080 PF14489 QueF-like protein RU53_RS04090 PF07972 NrdI Flavodoxin like RU53_RS04095 PF02867 Ribonucleotide reductase, barrel domain RU53_RS04095 PF00317 Ribonucleotide reductase, all-alpha domain RU53_RS04095 PF08343 Ribonucleotide reductase N-terminal RU53_RS04100 PF00268 Ribonucleotide reductase, small chain RU53_RS04110 PF01032 FecCD transport family RU53_RS04115 PF01032 FecCD transport family RU53_RS04120 PF00005 ABC transporter RU53_RS04125 PF01497 Periplasmic binding protein RU53_RS04135 PF01565 FAD binding domain RU53_RS04135 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RU53_RS04155 PF02595 Glycerate kinase family RU53_RS04160 PF07687 Peptidase dimerisation domain RU53_RS04160 PF01546 Peptidase family M20/M25/M40 RU53_RS04175 PF07694 5TMR of 5TMR-LYT RU53_RS04175 PF00990 Diguanylate cyclase, GGDEF domain RU53_RS04180 PF00953 Glycosyl transferase family 4 RU53_RS04185 PF09186 Domain of unknown function (DUF1949) RU53_RS04185 PF01205 Uncharacterized protein family UPF0029 RU53_RS04190 PF02645 Uncharacterised protein, DegV family COG1307 RU53_RS04195 PF04851 Type III restriction enzyme, res subunit RU53_RS04195 PF00271 Helicase conserved C-terminal domain RU53_RS04205 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RU53_RS04205 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RU53_RS04210 PF02810 SEC-C motif RU53_RS04210 PF01043 SecA preprotein cross-linking domain RU53_RS04210 PF07517 SecA DEAD-like domain RU53_RS04210 PF07516 SecA Wing and Scaffold domain RU53_RS04220 PF00472 RF-1 domain RU53_RS04220 PF03462 PCRF domain RU53_RS04230 PF01476 LysM domain RU53_RS04230 PF05257 CHAP domain RU53_RS04245 PF00271 Helicase conserved C-terminal domain RU53_RS04245 PF04851 Type III restriction enzyme, res subunit RU53_RS04245 PF02151 UvrB/uvrC motif RU53_RS04245 PF12344 Ultra-violet resistance protein B RU53_RS04245 PF17757 UvrB interaction domain RU53_RS04250 PF00005 ABC transporter RU53_RS04250 PF17760 UvrA interaction domain RU53_RS04250 PF17755 UvrA DNA-binding domain RU53_RS04255 PF02603 HPr Serine kinase N terminus RU53_RS04255 PF07475 HPr Serine kinase C-terminal domain RU53_RS04260 PF01790 Prolipoprotein diacylglyceryl transferase RU53_RS04275 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS04285 PF03668 P-loop ATPase protein family RU53_RS04290 PF01933 Uncharacterised protein family UPF0052 RU53_RS04295 PF02650 WhiA C-terminal HTH domain RU53_RS04295 PF14527 WhiA LAGLIDADG-like domain RU53_RS04295 PF10298 WhiA N-terminal LAGLIDADG-like domain RU53_RS04305 PF00574 Clp protease RU53_RS04310 PF01370 NAD dependent epimerase/dehydratase family RU53_RS04310 PF08338 Domain of unknown function (DUF1731) RU53_RS04320 PF04198 Putative sugar-binding domain RU53_RS04325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RU53_RS04325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RU53_RS04330 PF00162 Phosphoglycerate kinase RU53_RS04335 PF00121 Triosephosphate isomerase RU53_RS04340 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RU53_RS04340 PF01676 Metalloenzyme superfamily RU53_RS04345 PF00113 Enolase, C-terminal TIM barrel domain RU53_RS04345 PF03952 Enolase, N-terminal domain RU53_RS04355 PF03840 Preprotein translocase SecG subunit RU53_RS04360 PF12146 Serine aminopeptidase, S33 RU53_RS04365 PF00575 S1 RNA binding domain RU53_RS04365 PF00773 RNB domain RU53_RS04365 PF17876 Cold shock domain RU53_RS04365 PF08206 Ribonuclease B OB domain RU53_RS04370 PF01668 SmpB protein RU53_RS04455 PF10668 Phage terminase small subunit RU53_RS04455 PF03592 Terminase small subunit RU53_RS04470 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS04480 PF00186 Dihydrofolate reductase RU53_RS04520 PF17961 Bacterial Ig domain RU53_RS04520 PF00746 LPXTG cell wall anchor motif RU53_RS04520 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RU53_RS04520 PF04650 YSIRK type signal peptide RU53_RS04520 PF17961 Bacterial Ig domain RU53_RS04520 PF00746 LPXTG cell wall anchor motif RU53_RS04520 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RU53_RS04520 PF04650 YSIRK type signal peptide RU53_RS04525 PF04022 Staphylocoagulase repeat RU53_RS04525 PF08764 Staphylococcus aureus coagulase RU53_RS04540 PF00565 Staphylococcal nuclease homologue RU53_RS04545 PF00313 'Cold-shock' DNA-binding domain RU53_RS04585 PF00300 Histidine phosphatase superfamily (branch 1) RU53_RS04590 PF01810 LysE type translocator RU53_RS04600 PF02566 OsmC-like protein RU53_RS04605 PF01487 Type I 3-dehydroquinase RU53_RS04615 PF00085 Thioredoxin RU53_RS04620 PF03960 ArsC family RU53_RS04625 PF01597 Glycine cleavage H-protein RU53_RS04635 PF09234 Domain of unknown function (DUF1963) RU53_RS04645 PF01751 Toprim domain RU53_RS04655 PF09383 NIL domain RU53_RS04655 PF00005 ABC transporter RU53_RS04660 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS04665 PF03180 NLPA lipoprotein RU53_RS04670 PF05532 CsbD-like RU53_RS04680 PF00005 ABC transporter RU53_RS04685 PF01458 Uncharacterized protein family (UPF0051) RU53_RS04690 PF00266 Aminotransferase class-V RU53_RS04695 PF01592 NifU-like N terminal domain RU53_RS04700 PF01458 Uncharacterized protein family (UPF0051) RU53_RS04715 PF00571 CBS domain RU53_RS04715 PF01595 Cyclin M transmembrane N-terminal domain RU53_RS04715 PF03471 Transporter associated domain RU53_RS04720 PF03060 Nitronate monooxygenase RU53_RS04725 PF01904 Protein of unknown function DUF72 RU53_RS04730 PF01925 Sulfite exporter TauE/SafE RU53_RS04740 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RU53_RS04740 PF04055 Radical SAM superfamily RU53_RS04745 PF06265 Protein of unknown function (DUF1027) RU53_RS04755 PF01934 Protein of unknown function DUF86 RU53_RS04760 PF13344 Haloacid dehalogenase-like hydrolase RU53_RS04765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU53_RS04765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU53_RS04780 PF13193 AMP-binding enzyme C-terminal domain RU53_RS04780 PF00501 AMP-binding enzyme RU53_RS04785 PF03062 MBOAT, membrane-bound O-acyltransferase family RU53_RS04790 PF00550 Phosphopantetheine attachment site RU53_RS04795 PF04914 DltD protein RU53_RS04800 PF01106 NifU-like domain RU53_RS04805 PF07315 Protein of unknown function (DUF1462) RU53_RS04810 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS04815 PF07293 Protein of unknown function (DUF1450) RU53_RS04820 PF01521 Iron-sulphur cluster biosynthesis RU53_RS04825 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS04830 PF02789 Cytosol aminopeptidase family, N-terminal domain RU53_RS04830 PF00883 Cytosol aminopeptidase family, catalytic domain RU53_RS04835 PF03553 Na+/H+ antiporter family RU53_RS04835 PF13726 Na+-H+ antiporter family RU53_RS04840 PF03061 Thioesterase superfamily RU53_RS04850 PF03334 Na+/H+ antiporter subunit RU53_RS04855 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RU53_RS04860 PF01899 Na+/H+ ion antiporter subunit RU53_RS04865 PF00361 Proton-conducting membrane transporter RU53_RS04870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RU53_RS04875 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RU53_RS04880 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RU53_RS04880 PF00361 Proton-conducting membrane transporter RU53_RS04880 PF13244 Domain of unknown function (DUF4040) RU53_RS04890 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RU53_RS04895 PF00575 S1 RNA binding domain RU53_RS04900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RU53_RS04905 PF00202 Aminotransferase class-III RU53_RS04910 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RU53_RS04910 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RU53_RS04920 PF03009 Glycerophosphoryl diester phosphodiesterase family RU53_RS04925 PF00206 Lyase RU53_RS04925 PF14698 Argininosuccinate lyase C-terminal RU53_RS04930 PF00764 Arginosuccinate synthase RU53_RS04935 PF00342 Phosphoglucose isomerase RU53_RS04940 PF09335 SNARE associated Golgi protein RU53_RS04945 PF10502 Signal peptidase, peptidase S26 RU53_RS04950 PF10502 Signal peptidase, peptidase S26 RU53_RS04955 PF13361 UvrD-like helicase C-terminal domain RU53_RS04955 PF12705 PD-(D/E)XK nuclease superfamily RU53_RS04960 PF13361 UvrD-like helicase C-terminal domain RU53_RS04960 PF00580 UvrD/REP helicase N-terminal domain RU53_RS04960 PF12705 PD-(D/E)XK nuclease superfamily RU53_RS04965 PF01557 Fumarylacetoacetate (FAA) hydrolase family RU53_RS04970 PF07457 Protein of unknown function (DUF1516) RU53_RS04975 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS04975 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU53_RS04985 PF01883 Iron-sulfur cluster assembly protein RU53_RS04990 PF01757 Acyltransferase family RU53_RS04995 PF07724 AAA domain (Cdc48 subfamily) RU53_RS04995 PF10431 C-terminal, D2-small domain, of ClpB protein RU53_RS04995 PF17871 AAA lid domain RU53_RS04995 PF00004 ATPase family associated with various cellular activities (AAA) RU53_RS04995 PF02861 Clp amino terminal domain, pathogenicity island component RU53_RS05020 PF01161 Phosphatidylethanolamine-binding protein RU53_RS05025 PF03642 MAP domain RU53_RS05035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RU53_RS05035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RU53_RS05040 PF00109 Beta-ketoacyl synthase, N-terminal domain RU53_RS05040 PF02801 Beta-ketoacyl synthase, C-terminal domain RU53_RS05050 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS05055 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS05055 PF12911 N-terminal TM domain of oligopeptide transport permease C RU53_RS05060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RU53_RS05060 PF00005 ABC transporter RU53_RS05065 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RU53_RS05065 PF00005 ABC transporter RU53_RS05070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RU53_RS05075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RU53_RS05080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RU53_RS05080 PF00005 ABC transporter RU53_RS05085 PF00005 ABC transporter RU53_RS05085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RU53_RS05090 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS05095 PF12911 N-terminal TM domain of oligopeptide transport permease C RU53_RS05095 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS05100 PF00579 tRNA synthetases class I (W and Y) RU53_RS05105 PF03960 ArsC family RU53_RS05110 PF05389 Negative regulator of genetic competence (MecA) RU53_RS05120 PF08439 Oligopeptidase F RU53_RS05120 PF01432 Peptidase family M3 RU53_RS05130 PF01152 Bacterial-like globin RU53_RS05145 PF04607 Region found in RelA / SpoT proteins RU53_RS05150 PF01513 ATP-NAD kinase RU53_RS05155 PF00849 RNA pseudouridylate synthase RU53_RS05160 PF00571 CBS domain RU53_RS05160 PF01769 Divalent cation transporter RU53_RS05160 PF03448 MgtE intracellular N domain RU53_RS05165 PF00999 Sodium/hydrogen exchanger family RU53_RS05165 PF02254 TrkA-N domain RU53_RS05165 PF02080 TrkA-C domain RU53_RS05175 PF01594 AI-2E family transporter RU53_RS05180 PF01235 Sodium:alanine symporter family RU53_RS05195 PF07690 Major Facilitator Superfamily RU53_RS05200 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase RU53_RS05200 PF04101 Glycosyltransferase family 28 C-terminal domain RU53_RS05205 PF08245 Mur ligase middle domain RU53_RS05205 PF01225 Mur ligase family, catalytic domain RU53_RS05205 PF02875 Mur ligase family, glutamate ligase domain RU53_RS05215 PF16658 Class II release factor RF3, C-terminal domain RU53_RS05215 PF03144 Elongation factor Tu domain 2 RU53_RS05215 PF00009 Elongation factor Tu GTP binding domain RU53_RS05220 PF03741 Integral membrane protein TerC family RU53_RS05225 PF13180 PDZ domain RU53_RS05230 PF02386 Cation transport protein RU53_RS05235 PF02872 5'-nucleotidase, C-terminal domain RU53_RS05235 PF00149 Calcineurin-like phosphoesterase RU53_RS05250 PF06338 ComK protein RU53_RS05260 PF10437 Bacterial lipoate protein ligase C-terminus RU53_RS05260 PF03099 Biotin/lipoate A/B protein ligase family RU53_RS05295 PF02687 FtsX-like permease family RU53_RS05295 PF12704 MacB-like periplasmic core domain RU53_RS05295 PF00005 ABC transporter RU53_RS05310 PF01497 Periplasmic binding protein RU53_RS05320 PF05154 TM2 domain RU53_RS05325 PF00583 Acetyltransferase (GNAT) family RU53_RS05330 PF01040 UbiA prenyltransferase family RU53_RS05335 PF00425 chorismate binding enzyme RU53_RS05340 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RU53_RS05340 PF16582 Middle domain of thiamine pyrophosphate RU53_RS05340 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RU53_RS05345 PF00561 alpha/beta hydrolase fold RU53_RS05350 PF00378 Enoyl-CoA hydratase/isomerase RU53_RS05355 PF09023 Staphostatin B RU53_RS05360 PF14731 Staphopain proregion RU53_RS05360 PF05543 Staphopain peptidase C47 RU53_RS05370 PF00155 Aminotransferase class I and II RU53_RS05375 PF01757 Acyltransferase family RU53_RS05390 PF13457 GW (Gly-Tryp) dipeptide domain RU53_RS05390 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RU53_RS05395 PF13673 Acetyltransferase (GNAT) domain RU53_RS05400 PF10804 Protein of unknown function (DUF2538) RU53_RS05405 PF03816 Cell envelope-related transcriptional attenuator domain RU53_RS05410 PF00144 Beta-lactamase RU53_RS05415 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RU53_RS05420 PF00510 Cytochrome c oxidase subunit III RU53_RS05425 PF00115 Cytochrome C and Quinol oxidase polypeptide I RU53_RS05430 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RU53_RS05430 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RU53_RS05445 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RU53_RS05445 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RU53_RS05450 PF00731 AIR carboxylase RU53_RS05455 PF02222 ATP-grasp domain RU53_RS05455 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RU53_RS05455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU53_RS05460 PF01259 SAICAR synthetase RU53_RS05465 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RU53_RS05475 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RU53_RS05475 PF02769 AIR synthase related protein, C-terminal domain RU53_RS05475 PF00586 AIR synthase related protein, N-terminal domain RU53_RS05480 PF13537 Glutamine amidotransferase domain RU53_RS05480 PF00156 Phosphoribosyl transferase domain RU53_RS05485 PF00586 AIR synthase related protein, N-terminal domain RU53_RS05485 PF02769 AIR synthase related protein, C-terminal domain RU53_RS05490 PF00551 Formyl transferase RU53_RS05495 PF02142 MGS-like domain RU53_RS05495 PF01808 AICARFT/IMPCHase bienzyme RU53_RS05500 PF02844 Phosphoribosylglycinamide synthetase, N domain RU53_RS05500 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RU53_RS05500 PF02843 Phosphoribosylglycinamide synthetase, C domain RU53_RS05505 PF02361 Cobalt transport protein RU53_RS05510 PF00005 ABC transporter RU53_RS05515 PF09819 ABC-type cobalt transport system, permease component RU53_RS05535 PF17785 PUA-like domain RU53_RS05535 PF10672 S-adenosylmethionine-dependent methyltransferase RU53_RS05545 PF00381 PTS HPr component phosphorylation site RU53_RS05550 PF05524 PEP-utilising enzyme, N-terminal RU53_RS05550 PF00391 PEP-utilising enzyme, mobile domain RU53_RS05550 PF02896 PEP-utilising enzyme, TIM barrel domain RU53_RS05555 PF00462 Glutaredoxin RU53_RS05560 PF01654 Cytochrome bd terminal oxidase subunit I RU53_RS05565 PF02322 Cytochrome bd terminal oxidase subunit II RU53_RS05570 PF02080 TrkA-C domain RU53_RS05570 PF02254 TrkA-N domain RU53_RS05575 PF00753 Metallo-beta-lactamase superfamily RU53_RS05575 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RU53_RS05575 PF17770 Ribonuclease J C-terminal domain RU53_RS05580 PF07288 Protein of unknown function (DUF1447) RU53_RS05590 PF01327 Polypeptide deformylase RU53_RS05600 PF00676 Dehydrogenase E1 component RU53_RS05605 PF02779 Transketolase, pyrimidine binding domain RU53_RS05605 PF02780 Transketolase, C-terminal domain RU53_RS05610 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RU53_RS05610 PF02817 e3 binding domain RU53_RS05610 PF00364 Biotin-requiring enzyme RU53_RS05615 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU53_RS05615 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS05620 PF05256 Uncharacterised protein family (UPF0223) RU53_RS05630 PF00005 ABC transporter RU53_RS05630 PF08402 TOBE domain RU53_RS05635 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS05640 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS05645 PF13416 Bacterial extracellular solute-binding protein RU53_RS05660 PF01566 Natural resistance-associated macrophage protein RU53_RS05665 PF06335 Protein of unknown function (DUF1054) RU53_RS05670 PF00459 Inositol monophosphatase family RU53_RS05680 PF00009 Elongation factor Tu GTP binding domain RU53_RS05680 PF03144 Elongation factor Tu domain 2 RU53_RS05680 PF14492 Elongation Factor G, domain II RU53_RS05680 PF00679 Elongation factor G C-terminus RU53_RS05695 PF07408 Protein of unknown function (DUF1507) RU53_RS05700 PF01098 Cell cycle protein RU53_RS05705 PF00364 Biotin-requiring enzyme RU53_RS05705 PF00289 Biotin carboxylase, N-terminal domain RU53_RS05705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RU53_RS05705 PF00682 HMGL-like RU53_RS05705 PF02436 Conserved carboxylase domain RU53_RS05705 PF02785 Biotin carboxylase C-terminal domain RU53_RS05710 PF02628 Cytochrome oxidase assembly protein RU53_RS05715 PF01040 UbiA prenyltransferase family RU53_RS05735 PF06133 Control of competence regulator ComK, YlbF/YmcA RU53_RS05740 PF03009 Glycerophosphoryl diester phosphodiesterase family RU53_RS05745 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) RU53_RS05760 PF01467 Cytidylyltransferase-like RU53_RS05765 PF05636 HIGH Nucleotidyl Transferase RU53_RS05780 PF01783 Ribosomal L32p protein family RU53_RS05785 PF04650 YSIRK type signal peptide RU53_RS05785 PF05031 Iron Transport-associated domain RU53_RS05785 PF00746 LPXTG cell wall anchor motif RU53_RS05790 PF05031 Iron Transport-associated domain RU53_RS05790 PF00746 LPXTG cell wall anchor motif RU53_RS05795 PF05031 Iron Transport-associated domain RU53_RS05805 PF01497 Periplasmic binding protein RU53_RS05810 PF01032 FecCD transport family RU53_RS05815 PF04203 Sortase domain RU53_RS05820 PF03992 Antibiotic biosynthesis monooxygenase RU53_RS05830 PF00588 SpoU rRNA Methylase family RU53_RS05830 PF08032 RNA 2'-O ribose methyltransferase substrate binding RU53_RS05835 PF01409 tRNA synthetases class II core domain (F) RU53_RS05835 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RU53_RS05840 PF03147 Ferredoxin-fold anticodon binding domain RU53_RS05840 PF03483 B3/4 domain RU53_RS05840 PF03484 tRNA synthetase B5 domain RU53_RS05840 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RU53_RS05840 PF01588 Putative tRNA binding domain RU53_RS05845 PF11858 Domain of unknown function (DUF3378) RU53_RS05845 PF01351 Ribonuclease HII RU53_RS05850 PF05164 Cell division protein ZapA RU53_RS05860 PF14791 DNA polymerase beta thumb RU53_RS05860 PF02811 PHP domain RU53_RS05860 PF14716 Helix-hairpin-helix domain RU53_RS05865 PF01713 Smr domain RU53_RS05865 PF00488 MutS domain V RU53_RS05870 PF00085 Thioredoxin RU53_RS05880 PF01541 GIY-YIG catalytic domain RU53_RS05880 PF08459 UvrC Helix-hairpin-helix N-terminal RU53_RS05880 PF02151 UvrB/uvrC motif RU53_RS05885 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RU53_RS05890 PF00890 FAD binding domain RU53_RS05890 PF02910 Fumarate reductase flavoprotein C-term RU53_RS05895 PF13183 4Fe-4S dicluster domain RU53_RS05895 PF13085 2Fe-2S iron-sulfur cluster binding domain RU53_RS05900 PF01177 Asp/Glu/Hydantoin racemase RU53_RS05905 PF01725 Ham1 family RU53_RS05910 PF12850 Calcineurin-like phosphoesterase superfamily domain RU53_RS05930 PF16104 Formyl peptide receptor-like 1 inhibitory protein RU53_RS05940 PF12199 Extracellular fibrinogen binding protein C terminal RU53_RS05945 PF11546 Staphylococcal complement inhibitor SCIN RU53_RS05970 PF07968 Leukocidin/Hemolysin toxin family RU53_RS05990 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS05995 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS06000 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS06005 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RU53_RS06005 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RU53_RS06010 PF00696 Amino acid kinase family RU53_RS06015 PF03606 C4-dicarboxylate anaerobic carrier RU53_RS06040 PF05480 Staphylococcus haemolytic protein RU53_RS06050 PF13419 Haloacid dehalogenase-like hydrolase RU53_RS06060 PF10079 Bacillithiol biosynthesis BshC RU53_RS06065 PF02381 MraZ protein, putative antitoxin-like RU53_RS06070 PF01795 MraW methylase family RU53_RS06075 PF04977 Septum formation initiator RU53_RS06080 PF00905 Penicillin binding protein transpeptidase domain RU53_RS06080 PF03717 Penicillin-binding Protein dimerisation domain RU53_RS06080 PF03793 PASTA domain RU53_RS06085 PF00953 Glycosyl transferase family 4 RU53_RS06090 PF08245 Mur ligase middle domain RU53_RS06090 PF02875 Mur ligase family, glutamate ligase domain RU53_RS06095 PF03799 Cell division protein FtsQ RU53_RS06095 PF08478 POTRA domain, FtsQ-type RU53_RS06100 PF02491 SHS2 domain inserted in FTSA RU53_RS06105 PF00091 Tubulin/FtsZ family, GTPase domain RU53_RS06105 PF12327 FtsZ family, C-terminal domain RU53_RS06110 PF02578 Multi-copper polyphenol oxidoreductase laccase RU53_RS06115 PF01168 Alanine racemase, N-terminal domain RU53_RS06120 PF04472 Cell division protein SepF RU53_RS06125 PF02325 YGGT family RU53_RS06130 PF01479 S4 domain RU53_RS06130 PF17774 Putative RNA-binding domain in YlmH RU53_RS06135 PF05103 DivIVA protein RU53_RS06140 PF08264 Anticodon-binding domain of tRNA RU53_RS06140 PF00133 tRNA synthetases class I (I, L, M and V) RU53_RS06140 PF06827 Zinc finger found in FPG and IleRS RU53_RS06145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RU53_RS06155 PF01252 Signal peptidase (SPase) II RU53_RS06160 PF01479 S4 domain RU53_RS06160 PF00849 RNA pseudouridylate synthase RU53_RS06165 PF00156 Phosphoribosyl transferase domain RU53_RS06170 PF00860 Permease family RU53_RS06175 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RU53_RS06175 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RU53_RS06180 PF01979 Amidohydrolase family RU53_RS06185 PF00117 Glutamine amidotransferase class-I RU53_RS06185 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RU53_RS06190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RU53_RS06190 PF02142 MGS-like domain RU53_RS06190 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RU53_RS06195 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RU53_RS06200 PF00156 Phosphoribosyl transferase domain RU53_RS06215 PF05670 NFACT protein RNA binding domain RU53_RS06220 PF00625 Guanylate kinase RU53_RS06225 PF01192 RNA polymerase Rpb6 RU53_RS06230 PF04127 DNA / pantothenate metabolism flavoprotein RU53_RS06230 PF02441 Flavoprotein RU53_RS06235 PF17764 3′ DNA-binding domain (3′BD) RU53_RS06235 PF00271 Helicase conserved C-terminal domain RU53_RS06235 PF18074 Primosomal protein N C-terminal domain RU53_RS06235 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RU53_RS06235 PF04851 Type III restriction enzyme, res subunit RU53_RS06250 PF01327 Polypeptide deformylase RU53_RS06255 PF02911 Formyl transferase, C-terminal domain RU53_RS06255 PF00551 Formyl transferase RU53_RS06260 PF01029 NusB family RU53_RS06260 PF01189 16S rRNA methyltransferase RsmB/F RU53_RS06265 PF04055 Radical SAM superfamily RU53_RS06275 PF00069 Protein kinase domain RU53_RS06275 PF03793 PASTA domain RU53_RS06280 PF16745 RsgA N-terminal domain RU53_RS06280 PF03193 RsgA GTPase RU53_RS06285 PF00834 Ribulose-phosphate 3 epimerase family RU53_RS06295 PF00830 Ribosomal L28 family RU53_RS06300 PF03780 Asp23 family, cell envelope-related function RU53_RS06305 PF13684 Dihydroxyacetone kinase family RU53_RS06305 PF02734 DAK2 domain RU53_RS06310 PF00271 Helicase conserved C-terminal domain RU53_RS06310 PF00270 DEAD/DEAH box helicase RU53_RS06310 PF17191 RecG wedge domain RU53_RS06315 PF03061 Thioesterase superfamily RU53_RS06320 PF02504 Fatty acid synthesis protein RU53_RS06325 PF00698 Acyl transferase domain RU53_RS06340 PF00550 Phosphopantetheine attachment site RU53_RS06345 PF14622 Ribonuclease-III-like RU53_RS06345 PF00035 Double-stranded RNA binding motif RU53_RS06350 PF02463 RecF/RecN/SMC N terminal domain RU53_RS06350 PF06470 SMC proteins Flexible Hinge Domain RU53_RS06355 PF00448 SRP54-type protein, GTPase domain RU53_RS06355 PF02881 SRP54-type protein, helical bundle domain RU53_RS06360 PF04297 Putative helix-turn-helix protein, YlxM / p13 like RU53_RS06365 PF02881 SRP54-type protein, helical bundle domain RU53_RS06365 PF00448 SRP54-type protein, GTPase domain RU53_RS06365 PF02978 Signal peptide binding domain RU53_RS06370 PF00886 Ribosomal protein S16 RU53_RS06375 PF01782 RimM N-terminal domain RU53_RS06375 PF05239 PRC-barrel domain RU53_RS06380 PF01746 tRNA (Guanine-1)-methyltransferase RU53_RS06385 PF01245 Ribosomal protein L19 RU53_RS06395 PF01926 50S ribosome-binding GTPase RU53_RS06400 PF01351 Ribonuclease HII RU53_RS06405 PF08442 ATP-grasp domain RU53_RS06405 PF00549 CoA-ligase RU53_RS06410 PF02629 CoA binding domain RU53_RS06410 PF00549 CoA-ligase RU53_RS06415 PF05257 CHAP domain RU53_RS06415 PF01476 LysM domain RU53_RS06420 PF02388 FemAB family RU53_RS06425 PF02481 DNA recombination-mediator protein A RU53_RS06430 PF01131 DNA topoisomerase RU53_RS06430 PF01396 Topoisomerase DNA binding C4 zinc finger RU53_RS06430 PF01751 Toprim domain RU53_RS06435 PF01134 Glucose inhibited division protein A RU53_RS06440 PF00589 Phage integrase family RU53_RS06440 PF02899 Phage integrase, N-terminal SAM-like domain RU53_RS06445 PF00227 Proteasome subunit RU53_RS06450 PF07724 AAA domain (Cdc48 subfamily) RU53_RS06450 PF00004 ATPase family associated with various cellular activities (AAA) RU53_RS06450 PF10431 C-terminal, D2-small domain, of ClpB protein RU53_RS06455 PF08222 CodY helix-turn-helix domain RU53_RS06455 PF06018 CodY GAF-like domain RU53_RS06465 PF00318 Ribosomal protein S2 RU53_RS06475 PF00889 Elongation factor TS RU53_RS06480 PF00696 Amino acid kinase family RU53_RS06485 PF01765 Ribosome recycling factor RU53_RS06490 PF01255 Putative undecaprenyl diphosphate synthase RU53_RS06500 PF02163 Peptidase family M50 RU53_RS06500 PF13180 PDZ domain RU53_RS06505 PF03129 Anticodon binding domain RU53_RS06505 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RU53_RS06505 PF04073 Aminoacyl-tRNA editing domain RU53_RS06510 PF00929 Exonuclease RU53_RS06510 PF02811 PHP domain RU53_RS06510 PF14480 DNA polymerase III polC-type N-terminus I RU53_RS06510 PF14579 Helix-hairpin-helix motif RU53_RS06510 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RU53_RS06510 PF07733 Bacterial DNA polymerase III alpha NTPase domain RU53_RS06510 PF11490 DNA polymerase III polC-type N-terminus II RU53_RS06515 PF02576 RimP N-terminal domain RU53_RS06515 PF17384 RimP C-terminal SH3 domain RU53_RS06520 PF00575 S1 RNA binding domain RU53_RS06520 PF08529 NusA N-terminal domain RU53_RS06520 PF13184 NusA-like KH domain RU53_RS06525 PF04296 Protein of unknown function (DUF448) RU53_RS06530 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RU53_RS06535 PF04760 Translation initiation factor IF-2, N-terminal region RU53_RS06535 PF11987 Translation-initiation factor 2 RU53_RS06535 PF00009 Elongation factor Tu GTP binding domain RU53_RS06540 PF02033 Ribosome-binding factor A RU53_RS06545 PF01509 TruB family pseudouridylate synthase (N terminal domain) RU53_RS06545 PF16198 tRNA pseudouridylate synthase B C-terminal domain RU53_RS06550 PF01687 Riboflavin kinase RU53_RS06550 PF06574 FAD synthetase RU53_RS06555 PF00312 Ribosomal protein S15 RU53_RS06560 PF01138 3' exoribonuclease family, domain 1 RU53_RS06560 PF03725 3' exoribonuclease family, domain 2 RU53_RS06560 PF00575 S1 RNA binding domain RU53_RS06560 PF00013 KH domain RU53_RS06560 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RU53_RS06565 PF17770 Ribonuclease J C-terminal domain RU53_RS06565 PF00753 Metallo-beta-lactamase superfamily RU53_RS06565 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RU53_RS06570 PF01580 FtsK/SpoIIIE family RU53_RS06570 PF17854 FtsK alpha domain RU53_RS06570 PF09397 Ftsk gamma domain RU53_RS06575 PF00392 Bacterial regulatory proteins, gntR family RU53_RS06575 PF07702 UTRA domain RU53_RS06580 PF05193 Peptidase M16 inactive domain RU53_RS06585 PF05193 Peptidase M16 inactive domain RU53_RS06585 PF00675 Insulinase (Peptidase family M16) RU53_RS06595 PF11868 Protein of unknown function (DUF3388) RU53_RS06605 PF01066 CDP-alcohol phosphatidyltransferase RU53_RS06610 PF02464 Competence-damaged protein RU53_RS06610 PF00994 Probable molybdopterin binding domain RU53_RS06610 PF18146 Damage-inducible protein CinA KH domain RU53_RS06615 PF00154 recA bacterial DNA recombination protein RU53_RS06620 PF01966 HD domain RU53_RS06620 PF12072 Domain of unknown function (DUF3552) RU53_RS06620 PF00013 KH domain RU53_RS06630 PF13277 YmdB-like protein RU53_RS06635 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase RU53_RS06635 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg RU53_RS06635 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II RU53_RS06640 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RU53_RS06645 PF01910 Thiamine-binding protein RU53_RS06650 PF04055 Radical SAM superfamily RU53_RS06650 PF01938 TRAM domain RU53_RS06650 PF00919 Uncharacterized protein family UPF0004 RU53_RS06665 PF05192 MutS domain III RU53_RS06665 PF05188 MutS domain II RU53_RS06665 PF00488 MutS domain V RU53_RS06665 PF01624 MutS domain I RU53_RS06665 PF05190 MutS family domain IV RU53_RS06670 PF08676 MutL C terminal dimerisation domain RU53_RS06670 PF01119 DNA mismatch repair protein, C-terminal domain RU53_RS06675 PF04309 Glycerol-3-phosphate responsive antiterminator RU53_RS06680 PF00230 Major intrinsic protein RU53_RS06685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RU53_RS06685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RU53_RS06690 PF01266 FAD dependent oxidoreductase RU53_RS06690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RU53_RS06705 PF17209 Hfq protein RU53_RS06710 PF00255 Glutathione peroxidase RU53_RS06715 PF16360 GTP-binding GTPase Middle Region RU53_RS06715 PF13167 GTP-binding GTPase N-terminal RU53_RS06715 PF01926 50S ribosome-binding GTPase RU53_RS06720 PF06838 Methionine gamma-lyase RU53_RS06725 PF13411 MerR HTH family regulatory protein RU53_RS06730 PF03951 Glutamine synthetase, beta-Grasp domain RU53_RS06730 PF00120 Glutamine synthetase, catalytic domain RU53_RS06815 PF13396 Phospholipase_D-nuclease N-terminal RU53_RS06815 PF13091 PLD-like domain RU53_RS06820 PF00005 ABC transporter RU53_RS06835 PF00072 Response regulator receiver domain RU53_RS06835 PF00196 Bacterial regulatory proteins, luxR family RU53_RS06845 PF00565 Staphylococcal nuclease homologue RU53_RS06860 PF00696 Amino acid kinase family RU53_RS06860 PF13840 ACT domain RU53_RS06865 PF01842 ACT domain RU53_RS06865 PF00742 Homoserine dehydrogenase RU53_RS06865 PF03447 Homoserine dehydrogenase, NAD binding domain RU53_RS06870 PF00291 Pyridoxal-phosphate dependent enzyme RU53_RS06875 PF00288 GHMP kinases N terminal domain RU53_RS06875 PF08544 GHMP kinases C terminal RU53_RS06895 PF00324 Amino acid permease RU53_RS06900 PF00199 Catalase RU53_RS06900 PF06628 Catalase-related immune-responsive RU53_RS06905 PF00471 Ribosomal protein L33 RU53_RS06910 PF00253 Ribosomal protein S14p/S29e RU53_RS06915 PF00478 IMP dehydrogenase / GMP reductase domain RU53_RS06925 PF00188 Cysteine-rich secretory protein family RU53_RS06930 PF01726 LexA DNA binding domain RU53_RS06930 PF00717 Peptidase S24-like RU53_RS06940 PF05979 Bacterial protein of unknown function (DUF896) RU53_RS06945 PF02780 Transketolase, C-terminal domain RU53_RS06945 PF02779 Transketolase, pyrimidine binding domain RU53_RS06945 PF00456 Transketolase, thiamine diphosphate binding domain RU53_RS06950 PF03672 Uncharacterised protein family (UPF0154) RU53_RS06960 PF07301 Protein of unknown function (DUF1453) RU53_RS06965 PF00149 Calcineurin-like phosphoesterase RU53_RS06965 PF12320 Type 5 capsule protein repressor C-terminal domain RU53_RS06970 PF13476 AAA domain RU53_RS06975 PF01741 Large-conductance mechanosensitive channel, MscL RU53_RS06980 PF02028 BCCT, betaine/carnitine/choline family transporter RU53_RS06985 PF00694 Aconitase C-terminal domain RU53_RS06985 PF00330 Aconitase family (aconitate hydratase) RU53_RS06990 PF03061 Thioesterase superfamily RU53_RS07000 PF02660 Glycerol-3-phosphate acyltransferase RU53_RS07005 PF00204 DNA gyrase B RU53_RS07005 PF00986 DNA gyrase B subunit, carboxyl terminus RU53_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS07005 PF01751 Toprim domain RU53_RS07010 PF03989 DNA gyrase C-terminal domain, beta-propeller RU53_RS07010 PF00521 DNA gyrase/topoisomerase IV, subunit A RU53_RS07020 PF01235 Sodium:alanine symporter family RU53_RS07025 PF00874 PRD domain RU53_RS07025 PF03123 CAT RNA binding domain RU53_RS07035 PF01594 AI-2E family transporter RU53_RS07040 PF09924 Uncharacterised conserved protein (DUF2156) RU53_RS07040 PF03706 Lysylphosphatidylglycerol synthase TM region RU53_RS07045 PF01625 Peptide methionine sulfoxide reductase RU53_RS07050 PF03816 Cell envelope-related transcriptional attenuator domain RU53_RS07055 PF01361 Tautomerase enzyme RU53_RS07060 PF00817 impB/mucB/samB family RU53_RS07060 PF11798 IMS family HHH motif RU53_RS07060 PF11799 impB/mucB/samB family C-terminal domain RU53_RS07065 PF02153 Prephenate dehydrogenase RU53_RS07070 PF05343 M42 glutamyl aminopeptidase RU53_RS07075 PF00425 chorismate binding enzyme RU53_RS07075 PF04715 Anthranilate synthase component I, N terminal region RU53_RS07080 PF00117 Glutamine amidotransferase class-I RU53_RS07085 PF00591 Glycosyl transferase family, a/b domain RU53_RS07090 PF00218 Indole-3-glycerol phosphate synthase RU53_RS07095 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RU53_RS07100 PF00291 Pyridoxal-phosphate dependent enzyme RU53_RS07105 PF00290 Tryptophan synthase alpha chain RU53_RS07110 PF02388 FemAB family RU53_RS07115 PF02388 FemAB family RU53_RS07130 PF00005 ABC transporter RU53_RS07135 PF00005 ABC transporter RU53_RS07140 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS07145 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS07160 PF13610 DDE domain RU53_RS07165 PF01636 Phosphotransferase enzyme family RU53_RS07180 PF13610 DDE domain RU53_RS07185 PF02673 Bacitracin resistance protein BacA RU53_RS07195 PF00005 ABC transporter RU53_RS07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS07210 PF00486 Transcriptional regulatory protein, C terminal RU53_RS07210 PF00072 Response regulator receiver domain RU53_RS07215 PF13610 DDE domain RU53_RS07220 PF00005 ABC transporter RU53_RS07225 PF01636 Phosphotransferase enzyme family RU53_RS07230 PF13401 AAA domain RU53_RS07235 PF00665 Integrase core domain RU53_RS07235 PF09299 Mu transposase, C-terminal RU53_RS07240 PF00239 Resolvase, N terminal domain RU53_RS07240 PF02796 Helix-turn-helix domain of resolvase RU53_RS07245 PF03965 Penicillinase repressor RU53_RS07255 PF08139 Prokaryotic membrane lipoprotein lipid attachment site RU53_RS07260 PF13610 DDE domain RU53_RS07265 PF08439 Oligopeptidase F RU53_RS07265 PF01432 Peptidase family M3 RU53_RS07270 PF01895 PhoU domain RU53_RS07275 PF00005 ABC transporter RU53_RS07280 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS07285 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS07290 PF12849 PBP superfamily domain RU53_RS07305 PF13509 S1 domain RU53_RS07305 PF17783 CvfB-like winged helix domain RU53_RS07310 PF12848 ABC transporter RU53_RS07310 PF00005 ABC transporter RU53_RS07315 PF00696 Amino acid kinase family RU53_RS07315 PF13840 ACT domain RU53_RS07315 PF01842 ACT domain RU53_RS07320 PF01118 Semialdehyde dehydrogenase, NAD binding domain RU53_RS07320 PF02774 Semialdehyde dehydrogenase, dimerisation domain RU53_RS07325 PF00701 Dihydrodipicolinate synthetase family RU53_RS07330 PF01113 Dihydrodipicolinate reductase, N-terminus RU53_RS07330 PF05173 Dihydrodipicolinate reductase, C-terminus RU53_RS07335 PF14602 Hexapeptide repeat of succinyl-transferase RU53_RS07335 PF00132 Bacterial transferase hexapeptide (six repeats) RU53_RS07335 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal RU53_RS07340 PF01546 Peptidase family M20/M25/M40 RU53_RS07340 PF07687 Peptidase dimerisation domain RU53_RS07345 PF01168 Alanine racemase, N-terminal domain RU53_RS07345 PF00842 Alanine racemase, C-terminal domain RU53_RS07350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RU53_RS07350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RU53_RS07360 PF00313 'Cold-shock' DNA-binding domain RU53_RS07375 PF00708 Acylphosphatase RU53_RS07385 PF05816 Toxic anion resistance protein (TelA) RU53_RS07390 PF05525 Branched-chain amino acid transport protein RU53_RS07395 PF00092 von Willebrand factor type A domain RU53_RS07400 PF08406 CbbQ/NirQ/NorQ C-terminal RU53_RS07400 PF07728 AAA domain (dynein-related subfamily) RU53_RS07415 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RU53_RS07415 PF00364 Biotin-requiring enzyme RU53_RS07415 PF02817 e3 binding domain RU53_RS07420 PF00676 Dehydrogenase E1 component RU53_RS07420 PF16870 2-oxoglutarate dehydrogenase C-terminal RU53_RS07420 PF02779 Transketolase, pyrimidine binding domain RU53_RS07425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS07425 PF00512 His Kinase A (phospho-acceptor) domain RU53_RS07425 PF18719 ArlS sensor domain RU53_RS07430 PF00072 Response regulator receiver domain RU53_RS07430 PF00486 Transcriptional regulatory protein, C terminal RU53_RS07445 PF01569 PAP2 superfamily RU53_RS07450 PF04101 Glycosyltransferase family 28 C-terminal domain RU53_RS07450 PF03033 Glycosyltransferase family 28 N-terminal domain RU53_RS07465 PF01471 Putative peptidoglycan binding domain RU53_RS07465 PF03572 Peptidase family S41 RU53_RS07465 PF13180 PDZ domain RU53_RS07475 PF06855 YozE SAM-like fold RU53_RS07480 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RU53_RS07485 PF01641 SelR domain RU53_RS07490 PF01625 Peptide methionine sulfoxide reductase RU53_RS07495 PF02645 Uncharacterised protein, DegV family COG1307 RU53_RS07500 PF00186 Dihydrofolate reductase RU53_RS07505 PF00303 Thymidylate synthase RU53_RS07510 PF06491 Disulphide isomerase RU53_RS07515 PF08712 Scaffold protein Nfu/NifU N terminal RU53_RS07515 PF13769 Virulence factor RU53_RS07520 PF08712 Scaffold protein Nfu/NifU N terminal RU53_RS07520 PF13769 Virulence factor RU53_RS07530 PF02592 Putative vitamin uptake transporter RU53_RS07550 PF01468 GA module RU53_RS07550 PF07564 Domain of Unknown Function (DUF1542) RU53_RS07550 PF04650 YSIRK type signal peptide RU53_RS07555 PF07690 Major Facilitator Superfamily RU53_RS07560 PF13520 Amino acid permease RU53_RS07565 PF00291 Pyridoxal-phosphate dependent enzyme RU53_RS07570 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RU53_RS07570 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RU53_RS07575 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RU53_RS07575 PF01367 5'-3' exonuclease, C-terminal SAM fold RU53_RS07580 PF00350 Dynamin family RU53_RS07600 PF02926 THUMP domain RU53_RS07600 PF01170 Putative RNA methylase family UPF0020 RU53_RS07605 PF05103 DivIVA protein RU53_RS07610 PF06908 YspA SLOG family RU53_RS07625 PF03838 Recombination protein U RU53_RS07630 PF00905 Penicillin binding protein transpeptidase domain RU53_RS07630 PF00912 Transglycosylase RU53_RS07640 PF00730 HhH-GPD superfamily base excision DNA repair protein RU53_RS07640 PF00633 Helix-hairpin-helix motif RU53_RS07640 PF10576 Iron-sulfur binding domain of endonuclease III RU53_RS07645 PF07261 Replication initiation and membrane attachment RU53_RS07650 PF01336 OB-fold nucleic acid binding domain RU53_RS07650 PF00152 tRNA synthetases class II (D, K and N) RU53_RS07655 PF13307 Helicase C-terminal domain RU53_RS07655 PF00929 Exonuclease RU53_RS07660 PF08279 HTH domain RU53_RS07660 PF02237 Biotin protein ligase C terminal domain RU53_RS07660 PF03099 Biotin/lipoate A/B protein ligase family RU53_RS07665 PF12627 Probable RNA and SrmB- binding site of polymerase A RU53_RS07665 PF01743 Poly A polymerase head domain RU53_RS07665 PF13735 tRNA nucleotidyltransferase domain 2 putative RU53_RS07670 PF13439 Glycosyltransferase Family 4 RU53_RS07670 PF00534 Glycosyl transferases group 1 RU53_RS07675 PF03819 MazG nucleotide pyrophosphohydrolase domain RU53_RS07680 PF04298 Putative neutral zinc metallopeptidase RU53_RS07685 PF07187 Protein of unknown function (DUF1405) RU53_RS07690 PF08864 UPF0302 domain RU53_RS07690 PF08858 IDEAL domain RU53_RS07700 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RU53_RS07705 PF01761 3-dehydroquinate synthase RU53_RS07710 PF01264 Chorismate synthase RU53_RS07720 PF00334 Nucleoside diphosphate kinase RU53_RS07725 PF00348 Polyprenyl synthetase RU53_RS07730 PF01209 ubiE/COQ5 methyltransferase family RU53_RS07745 PF00216 Bacterial DNA-binding protein RU53_RS07750 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RU53_RS07750 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RU53_RS07755 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RU53_RS07755 PF01926 50S ribosome-binding GTPase RU53_RS07760 PF00575 S1 RNA binding domain RU53_RS07770 PF02224 Cytidylate kinase RU53_RS07775 PF00710 Asparaginase, N-terminal RU53_RS07775 PF17763 Glutaminase/Asparaginase C-terminal domain RU53_RS07790 PF01476 LysM domain RU53_RS07795 PF00270 DEAD/DEAH box helicase RU53_RS07795 PF00271 Helicase conserved C-terminal domain RU53_RS07810 PF12822 ECF transporter, substrate-specific component RU53_RS07840 PF07968 Leukocidin/Hemolysin toxin family RU53_RS07845 PF07968 Leukocidin/Hemolysin toxin family RU53_RS07850 PF01520 N-acetylmuramoyl-L-alanine amidase RU53_RS07850 PF05257 CHAP domain RU53_RS07850 PF08460 Bacterial SH3 domain RU53_RS07870 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS07950 PF00574 Clp protease RU53_RS08005 PF00692 dUTPase RU53_RS08060 PF01695 IstB-like ATP binding protein RU53_RS08130 PF03374 Phage antirepressor protein KilAC domain RU53_RS08130 PF09669 Phage regulatory protein Rha (Phage_pRha) RU53_RS08140 PF00717 Peptidase S24-like RU53_RS08140 PF01726 LexA DNA binding domain RU53_RS08165 PF00589 Phage integrase family RU53_RS08165 PF14659 Phage integrase, N-terminal SAM-like domain RU53_RS08180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS08180 PF00672 HAMP domain RU53_RS08180 PF00512 His Kinase A (phospho-acceptor) domain RU53_RS08180 PF18698 Histidine kinase sensor domain RU53_RS08185 PF00486 Transcriptional regulatory protein, C terminal RU53_RS08185 PF00072 Response regulator receiver domain RU53_RS08190 PF00849 RNA pseudouridylate synthase RU53_RS08190 PF01479 S4 domain RU53_RS08195 PF04079 Segregation and condensation complex subunit ScpB RU53_RS08200 PF02616 Segregation and condensation protein ScpA RU53_RS08210 PF00589 Phage integrase family RU53_RS08210 PF02899 Phage integrase, N-terminal SAM-like domain RU53_RS08215 PF01475 Ferric uptake regulator family RU53_RS08220 PF00293 NUDIX domain RU53_RS08225 PF00248 Aldo/keto reductase family RU53_RS08235 PF00106 short chain dehydrogenase RU53_RS08240 PF14748 Pyrroline-5-carboxylate reductase dimerisation RU53_RS08240 PF03807 NADP oxidoreductase coenzyme F420-dependent RU53_RS08245 PF12706 Beta-lactamase superfamily domain RU53_RS08250 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RU53_RS08250 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RU53_RS08260 PF00128 Alpha amylase, catalytic domain RU53_RS08260 PF16657 Maltogenic Amylase, C-terminal domain RU53_RS08265 PF00356 Bacterial regulatory proteins, lacI family RU53_RS08280 PF01610 Transposase RU53_RS08280 PF13683 Integrase core domain RU53_RS08290 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RU53_RS08290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RU53_RS08295 PF01546 Peptidase family M20/M25/M40 RU53_RS08295 PF07687 Peptidase dimerisation domain RU53_RS08305 PF11728 Putative aromatic acid exporter C-terminal domain RU53_RS08305 PF06081 Aromatic acid exporter family member 1 RU53_RS08310 PF06491 Disulphide isomerase RU53_RS08315 PF00364 Biotin-requiring enzyme RU53_RS08315 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RU53_RS08315 PF02817 e3 binding domain RU53_RS08320 PF02779 Transketolase, pyrimidine binding domain RU53_RS08320 PF02780 Transketolase, C-terminal domain RU53_RS08325 PF00676 Dehydrogenase E1 component RU53_RS08330 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS08330 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RU53_RS08335 PF13476 AAA domain RU53_RS08340 PF02863 Arginine repressor, C-terminal domain RU53_RS08340 PF01316 Arginine repressor, DNA binding domain RU53_RS08345 PF00348 Polyprenyl synthetase RU53_RS08350 PF02609 Exonuclease VII small subunit RU53_RS08355 PF02601 Exonuclease VII, large subunit RU53_RS08355 PF13742 OB-fold nucleic acid binding domain RU53_RS08360 PF01029 NusB family RU53_RS08365 PF03780 Asp23 family, cell envelope-related function RU53_RS08370 PF02785 Biotin carboxylase C-terminal domain RU53_RS08370 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RU53_RS08370 PF00289 Biotin carboxylase, N-terminal domain RU53_RS08375 PF00364 Biotin-requiring enzyme RU53_RS08380 PF01132 Elongation factor P (EF-P) OB domain RU53_RS08380 PF08207 Elongation factor P (EF-P) KOW-like domain RU53_RS08380 PF09285 Elongation factor P, C-terminal RU53_RS08385 PF00557 Metallopeptidase family M24 RU53_RS08385 PF01321 Creatinase/Prolidase N-terminal domain RU53_RS08400 PF03099 Biotin/lipoate A/B protein ligase family RU53_RS08405 PF00581 Rhodanese-like domain RU53_RS08410 PF00266 Aminotransferase class-V RU53_RS08415 PF02347 Glycine cleavage system P-protein RU53_RS08420 PF01571 Aminomethyltransferase folate-binding domain RU53_RS08420 PF08669 Glycine cleavage T-protein C-terminal barrel domain RU53_RS08425 PF01202 Shikimate kinase RU53_RS08450 PF07963 Prokaryotic N-terminal methylation motif RU53_RS08455 PF00482 Type II secretion system (T2SS), protein F RU53_RS08460 PF00437 Type II/IV secretion system protein RU53_RS08465 PF00753 Metallo-beta-lactamase superfamily RU53_RS08470 PF01910 Thiamine-binding protein RU53_RS08475 PF00480 ROK family RU53_RS08480 PF06014 Bacterial protein of unknown function (DUF910) RU53_RS08490 PF01812 5-formyltetrahydrofolate cyclo-ligase family RU53_RS08495 PF00471 Ribosomal protein L33 RU53_RS08500 PF00905 Penicillin binding protein transpeptidase domain RU53_RS08500 PF03717 Penicillin-binding Protein dimerisation domain RU53_RS08505 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RU53_RS08505 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RU53_RS08510 PF01475 Ferric uptake regulator family RU53_RS08515 PF00950 ABC 3 transport family RU53_RS08520 PF00005 ABC transporter RU53_RS08525 PF01261 Xylose isomerase-like TIM barrel RU53_RS08530 PF00270 DEAD/DEAH box helicase RU53_RS08530 PF00271 Helicase conserved C-terminal domain RU53_RS08535 PF01784 NIF3 (NGG1p interacting factor 3) RU53_RS08540 PF04816 tRNA (adenine(22)-N(1))-methyltransferase RU53_RS08545 PF04542 Sigma-70 region 2 RU53_RS08545 PF00140 Sigma-70 factor, region 1.2 RU53_RS08545 PF03979 Sigma-70 factor, region 1.1 RU53_RS08545 PF04539 Sigma-70 region 3 RU53_RS08545 PF04545 Sigma-70, region 4 RU53_RS08550 PF00772 DnaB-like helicase N terminal domain RU53_RS08550 PF01807 CHC2 zinc finger RU53_RS08550 PF08275 DNA primase catalytic core, N-terminal domain RU53_RS08555 PF03618 Kinase/pyrophosphorylase RU53_RS08560 PF08279 HTH domain RU53_RS08560 PF00571 CBS domain RU53_RS08565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RU53_RS08565 PF03129 Anticodon binding domain RU53_RS08570 PF02565 Recombination protein O C terminal RU53_RS08570 PF11967 Recombination protein O N terminal RU53_RS08575 PF07650 KH domain RU53_RS08575 PF01926 50S ribosome-binding GTPase RU53_RS08580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RU53_RS08590 PF02130 Uncharacterized protein family UPF0054 RU53_RS08595 PF02562 PhoH-like protein RU53_RS08605 PF12127 SigmaW regulon antibacterial RU53_RS08610 PF01972 Serine dehydrogenase proteinase RU53_RS08610 PF01957 NfeD-like C-terminal, partner-binding RU53_RS08615 PF01165 Ribosomal protein S21 RU53_RS08620 PF04055 Radical SAM superfamily RU53_RS08620 PF01938 TRAM domain RU53_RS08620 PF00919 Uncharacterized protein family UPF0004 RU53_RS08625 PF04452 RNA methyltransferase RU53_RS08635 PF00226 DnaJ domain RU53_RS08635 PF00684 DnaJ central domain RU53_RS08635 PF01556 DnaJ C terminal domain RU53_RS08640 PF00012 Hsp70 protein RU53_RS08645 PF01025 GrpE RU53_RS08650 PF01628 HrcA protein C terminal domain RU53_RS08655 PF04055 Radical SAM superfamily RU53_RS08655 PF06969 HemN C-terminal domain RU53_RS08660 PF00679 Elongation factor G C-terminus RU53_RS08660 PF06421 GTP-binding protein LepA C-terminus RU53_RS08660 PF03144 Elongation factor Tu domain 2 RU53_RS08660 PF00009 Elongation factor Tu GTP binding domain RU53_RS08665 PF01649 Ribosomal protein S20 RU53_RS08670 PF06144 DNA polymerase III, delta subunit RU53_RS08675 PF03772 Competence protein RU53_RS08675 PF13567 Domain of unknown function (DUF4131) RU53_RS08675 PF00753 Metallo-beta-lactamase superfamily RU53_RS08680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RU53_RS08690 PF13649 Methyltransferase domain RU53_RS08700 PF01966 HD domain RU53_RS08705 PF01467 Cytidylyltransferase-like RU53_RS08710 PF01985 CRS1 / YhbY (CRM) domain RU53_RS08715 PF01488 Shikimate / quinate 5-dehydrogenase RU53_RS08715 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RU53_RS08715 PF08501 Shikimate dehydrogenase substrate binding domain RU53_RS08720 PF01926 50S ribosome-binding GTPase RU53_RS08730 PF01048 Phosphorylase superfamily RU53_RS08745 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS08750 PF12728 Helix-turn-helix domain RU53_RS08750 PF02661 Fic/DOC family RU53_RS08755 PF01566 Natural resistance-associated macrophage protein RU53_RS08760 PF03746 LamB/YcsF family RU53_RS08765 PF02785 Biotin carboxylase C-terminal domain RU53_RS08765 PF00289 Biotin carboxylase, N-terminal domain RU53_RS08765 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RU53_RS08770 PF00364 Biotin-requiring enzyme RU53_RS08775 PF02626 Carboxyltransferase domain, subdomain A and B RU53_RS08780 PF02682 Carboxyltransferase domain, subdomain C and D RU53_RS08785 PF03449 Transcription elongation factor, N-terminal RU53_RS08785 PF01272 Transcription elongation factor, GreA/GreB, C-term RU53_RS08790 PF00485 Phosphoribulokinase / Uridine kinase family RU53_RS08795 PF01136 Peptidase family U32 RU53_RS08795 PF16325 Peptidase family U32 C-terminal domain RU53_RS08800 PF01136 Peptidase family U32 RU53_RS08810 PF06949 Protein of unknown function (DUF1292) RU53_RS08815 PF03652 Holliday junction resolvase RU53_RS08820 PF06135 IreB regulatory phosphoprotein RU53_RS08825 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RU53_RS08825 PF02272 DHHA1 domain RU53_RS08825 PF01411 tRNA synthetases class II (A) RU53_RS08830 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain RU53_RS08830 PF14490 Helix-hairpin-helix containing domain RU53_RS08830 PF13538 UvrD-like helicase C-terminal domain RU53_RS08850 PF00266 Aminotransferase class-V RU53_RS08855 PF00296 Luciferase-like monooxygenase RU53_RS08865 PF05532 CsbD-like RU53_RS08870 PF02082 Transcriptional regulator RU53_RS08875 PF16193 AAA C-terminal domain RU53_RS08875 PF12002 MgsA AAA+ ATPase C terminal RU53_RS08875 PF05496 Holliday junction DNA helicase RuvB P-loop domain RU53_RS08880 PF00899 ThiF family RU53_RS08890 PF00152 tRNA synthetases class II (D, K and N) RU53_RS08890 PF02938 GAD domain RU53_RS08890 PF01336 OB-fold nucleic acid binding domain RU53_RS08895 PF13393 Histidyl-tRNA synthetase RU53_RS08895 PF03129 Anticodon binding domain RU53_RS08900 PF01520 N-acetylmuramoyl-L-alanine amidase RU53_RS08900 PF08239 Bacterial SH3 domain RU53_RS08905 PF02580 D-Tyr-tRNA(Tyr) deacylase RU53_RS08910 PF13291 ACT domain RU53_RS08910 PF04607 Region found in RelA / SpoT proteins RU53_RS08910 PF02824 TGS domain RU53_RS08915 PF00156 Phosphoribosyl transferase domain RU53_RS08920 PF01368 DHH family RU53_RS08920 PF02272 DHHA1 domain RU53_RS08920 PF10141 Single-strand DNA-specific exonuclease, C terminal domain RU53_RS08920 PF17768 RecJ OB domain RU53_RS08925 PF07549 SecD/SecF GG Motif RU53_RS08925 PF02355 Protein export membrane protein RU53_RS08930 PF02699 Preprotein translocase subunit RU53_RS08935 PF01702 Queuine tRNA-ribosyltransferase RU53_RS08940 PF02547 Queuosine biosynthesis protein RU53_RS08945 PF17864 RuvB AAA lid domain RU53_RS08945 PF05491 RuvB C-terminal winged helix domain RU53_RS08945 PF05496 Holliday junction DNA helicase RuvB P-loop domain RU53_RS08950 PF01330 RuvA N terminal domain RU53_RS08950 PF07499 RuvA, C-terminal domain RU53_RS08960 PF09269 Domain of unknown function (DUF1967) RU53_RS08960 PF01926 50S ribosome-binding GTPase RU53_RS08960 PF01018 GTP1/OBG RU53_RS08965 PF01016 Ribosomal L27 protein RU53_RS08970 PF04327 Cysteine protease Prp RU53_RS08975 PF00829 Ribosomal prokaryotic L21 protein RU53_RS09005 PF04002 RadC-like JAB domain RU53_RS09010 PF01478 Type IV leader peptidase family RU53_RS09010 PF06750 Bacterial Peptidase A24 N-terminal domain RU53_RS09020 PF08245 Mur ligase middle domain RU53_RS09020 PF02875 Mur ligase family, glutamate ligase domain RU53_RS09025 PF08264 Anticodon-binding domain of tRNA RU53_RS09025 PF00133 tRNA synthetases class I (I, L, M and V) RU53_RS09025 PF10458 Valyl tRNA synthetase tRNA binding arm RU53_RS09030 PF03352 Methyladenine glycosylase RU53_RS09045 PF00202 Aminotransferase class-III RU53_RS09050 PF00490 Delta-aminolevulinic acid dehydratase RU53_RS09060 PF03900 Porphobilinogen deaminase, C-terminal domain RU53_RS09060 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RU53_RS09065 PF01578 Cytochrome C assembly protein RU53_RS09070 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RU53_RS09070 PF01488 Shikimate / quinate 5-dehydrogenase RU53_RS09070 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RU53_RS09075 PF01926 50S ribosome-binding GTPase RU53_RS09080 PF07724 AAA domain (Cdc48 subfamily) RU53_RS09080 PF06689 ClpX C4-type zinc finger RU53_RS09080 PF10431 C-terminal, D2-small domain, of ClpB protein RU53_RS09085 PF05698 Bacterial trigger factor protein (TF) C-terminus RU53_RS09085 PF05697 Bacterial trigger factor protein (TF) RU53_RS09085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RU53_RS09110 PF00453 Ribosomal protein L20 RU53_RS09115 PF01632 Ribosomal protein L35 RU53_RS09120 PF05198 Translation initiation factor IF-3, N-terminal domain RU53_RS09120 PF00707 Translation initiation factor IF-3, C-terminal domain RU53_RS09125 PF00324 Amino acid permease RU53_RS09130 PF02824 TGS domain RU53_RS09130 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RU53_RS09130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RU53_RS09130 PF03129 Anticodon binding domain RU53_RS09140 PF01695 IstB-like ATP binding protein RU53_RS09140 PF07319 Primosomal protein DnaI N-terminus RU53_RS09150 PF03477 ATP cone domain RU53_RS09155 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RU53_RS09155 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RU53_RS09160 PF01121 Dephospho-CoA kinase RU53_RS09165 PF06827 Zinc finger found in FPG and IleRS RU53_RS09165 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RU53_RS09165 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RU53_RS09170 PF00476 DNA polymerase family A RU53_RS09170 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RU53_RS09170 PF01367 5'-3' exonuclease, C-terminal SAM fold RU53_RS09180 PF00989 PAS fold RU53_RS09180 PF16736 Single Cache-like RU53_RS09180 PF00512 His Kinase A (phospho-acceptor) domain RU53_RS09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS09185 PF00486 Transcriptional regulatory protein, C terminal RU53_RS09185 PF00072 Response regulator receiver domain RU53_RS09195 PF00180 Isocitrate/isopropylmalate dehydrogenase RU53_RS09200 PF00285 Citrate synthase, C-terminal domain RU53_RS09205 PF00324 Amino acid permease RU53_RS09210 PF00391 PEP-utilising enzyme, mobile domain RU53_RS09210 PF02887 Pyruvate kinase, alpha/beta domain RU53_RS09210 PF00224 Pyruvate kinase, barrel domain RU53_RS09215 PF00365 Phosphofructokinase RU53_RS09225 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RU53_RS09230 PF01039 Carboxyl transferase domain RU53_RS09230 PF17848 Acetyl-coA carboxylase zinc finger domain RU53_RS09235 PF03949 Malic enzyme, NAD binding domain RU53_RS09235 PF00390 Malic enzyme, N-terminal domain RU53_RS09240 PF01336 OB-fold nucleic acid binding domain RU53_RS09240 PF07733 Bacterial DNA polymerase III alpha NTPase domain RU53_RS09240 PF02811 PHP domain RU53_RS09240 PF14579 Helix-hairpin-helix motif RU53_RS09240 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RU53_RS09245 PF01368 DHH family RU53_RS09245 PF02272 DHHA1 domain RU53_RS09250 PF00571 CBS domain RU53_RS09250 PF07085 DRTGG domain RU53_RS09250 PF00392 Bacterial regulatory proteins, gntR family RU53_RS09250 PF03061 Thioesterase superfamily RU53_RS09265 PF01321 Creatinase/Prolidase N-terminal domain RU53_RS09265 PF00557 Metallopeptidase family M24 RU53_RS09275 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RU53_RS09275 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RU53_RS09280 PF00582 Universal stress protein family RU53_RS09285 PF00871 Acetokinase family RU53_RS09290 PF02384 N-6 DNA Methylase RU53_RS09295 PF08534 Redoxin RU53_RS09300 PF01925 Sulfite exporter TauE/SafE RU53_RS09305 PF02568 Thiamine biosynthesis protein (ThiI) RU53_RS09305 PF02926 THUMP domain RU53_RS09310 PF00266 Aminotransferase class-V RU53_RS09320 PF06160 Septation ring formation regulator, EzrA RU53_RS09325 PF13185 GAF domain RU53_RS09330 PF00163 Ribosomal protein S4/S9 N-terminal domain RU53_RS09330 PF01479 S4 domain RU53_RS09340 PF03009 Glycerophosphoryl diester phosphodiesterase family RU53_RS09345 PF02566 OsmC-like protein RU53_RS09350 PF00266 Aminotransferase class-V RU53_RS09355 PF01842 ACT domain RU53_RS09355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU53_RS09355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU53_RS09380 PF00367 phosphotransferase system, EIIB RU53_RS09380 PF02378 Phosphotransferase system, EIIC RU53_RS09385 PF01553 Acyltransferase RU53_RS09390 PF13180 PDZ domain RU53_RS09395 PF01479 S4 domain RU53_RS09395 PF00579 tRNA synthetases class I (W and Y) RU53_RS09400 PF00905 Penicillin binding protein transpeptidase domain RU53_RS09400 PF00912 Transglycosylase RU53_RS09410 PF04650 YSIRK type signal peptide RU53_RS09410 PF05031 Iron Transport-associated domain RU53_RS09420 PF01268 Formate--tetrahydrofolate ligase RU53_RS09425 PF00501 AMP-binding enzyme RU53_RS09425 PF13193 AMP-binding enzyme C-terminal domain RU53_RS09430 PF00583 Acetyltransferase (GNAT) family RU53_RS09435 PF00850 Histone deacetylase domain RU53_RS09440 PF00356 Bacterial regulatory proteins, lacI family RU53_RS09450 PF00793 DAHP synthetase I family RU53_RS09450 PF01817 Chorismate mutase type II RU53_RS09470 PF06103 Bacterial protein of unknown function (DUF948) RU53_RS09475 PF02875 Mur ligase family, glutamate ligase domain RU53_RS09475 PF01225 Mur ligase family, catalytic domain RU53_RS09475 PF08245 Mur ligase middle domain RU53_RS09480 PF09397 Ftsk gamma domain RU53_RS09480 PF17854 FtsK alpha domain RU53_RS09480 PF01580 FtsK/SpoIIIE family RU53_RS09485 PF14794 Domain of unknown function (DUF4479) RU53_RS09485 PF01588 Putative tRNA binding domain RU53_RS09490 PF07285 Protein of unknown function (DUF1444) RU53_RS09495 PF00085 Thioredoxin RU53_RS09500 PF05343 M42 glutamyl aminopeptidase RU53_RS09510 PF00753 Metallo-beta-lactamase superfamily RU53_RS09515 PF02390 Putative methyltransferase RU53_RS09520 PF01636 Phosphotransferase enzyme family RU53_RS09525 PF01063 Amino-transferase class IV RU53_RS09530 PF01546 Peptidase family M20/M25/M40 RU53_RS09540 PF00849 RNA pseudouridylate synthase RU53_RS09540 PF01479 S4 domain RU53_RS09545 PF14667 Polysaccharide biosynthesis C-terminal domain RU53_RS09545 PF01943 Polysaccharide biosynthesis protein RU53_RS09555 PF04650 YSIRK type signal peptide RU53_RS09555 PF01468 GA module RU53_RS09555 PF07564 Domain of Unknown Function (DUF1542) RU53_RS09565 PF00133 tRNA synthetases class I (I, L, M and V) RU53_RS09565 PF08264 Anticodon-binding domain of tRNA RU53_RS09565 PF09334 tRNA synthetases class I (M) RU53_RS09565 PF13603 Leucyl-tRNA synthetase, Domain 2 RU53_RS09570 PF07690 Major Facilitator Superfamily RU53_RS09575 PF16199 Radical_SAM C-terminal domain RU53_RS09575 PF04055 Radical SAM superfamily RU53_RS09580 PF06962 Putative rRNA methylase RU53_RS09585 PF01047 MarR family RU53_RS09600 PF12146 Serine aminopeptidase, S33 RU53_RS09610 PF01619 Proline dehydrogenase RU53_RS09615 PF00885 6,7-dimethyl-8-ribityllumazine synthase RU53_RS09620 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RU53_RS09620 PF00925 GTP cyclohydrolase II RU53_RS09625 PF00677 Lumazine binding domain RU53_RS09630 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RU53_RS09630 PF01872 RibD C-terminal domain RU53_RS09640 PF01022 Bacterial regulatory protein, arsR family RU53_RS09645 PF02040 Arsenical pump membrane protein RU53_RS09650 PF01451 Low molecular weight phosphotyrosine protein phosphatase RU53_RS09660 PF13457 GW (Gly-Tryp) dipeptide domain RU53_RS09660 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RU53_RS09670 PF04542 Sigma-70 region 2 RU53_RS09690 PF00923 Transaldolase/Fructose-6-phosphate aldolase RU53_RS09700 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RU53_RS09705 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RU53_RS09710 PF00248 Aldo/keto reductase family RU53_RS09720 PF00438 S-adenosylmethionine synthetase, N-terminal domain RU53_RS09720 PF02772 S-adenosylmethionine synthetase, central domain RU53_RS09720 PF02773 S-adenosylmethionine synthetase, C-terminal domain RU53_RS09725 PF01293 Phosphoenolpyruvate carboxykinase RU53_RS09730 PF00326 Prolyl oligopeptidase family RU53_RS09740 PF01809 Putative membrane protein insertion efficiency factor RU53_RS09750 PF13193 AMP-binding enzyme C-terminal domain RU53_RS09750 PF00501 AMP-binding enzyme RU53_RS09775 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS09780 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS09815 PF02384 N-6 DNA Methylase RU53_RS09815 PF12161 HsdM N-terminal domain RU53_RS09870 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS09875 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS09880 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS09885 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS09890 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain RU53_RS09945 PF01593 Flavin containing amine oxidoreductase RU53_RS09950 PF00762 Ferrochelatase RU53_RS09955 PF01208 Uroporphyrinogen decarboxylase (URO-D) RU53_RS09975 PF00005 ABC transporter RU53_RS09980 PF01230 HIT domain RU53_RS09995 PF00639 PPIC-type PPIASE domain RU53_RS10000 PF01966 HD domain RU53_RS10010 PF00149 Calcineurin-like phosphoesterase RU53_RS10020 PF06133 Control of competence regulator ComK, YlbF/YmcA RU53_RS10025 PF04286 Protein of unknown function (DUF445) RU53_RS10035 PF00072 Response regulator receiver domain RU53_RS10035 PF00196 Bacterial regulatory proteins, luxR family RU53_RS10040 PF13185 GAF domain RU53_RS10040 PF07730 Histidine kinase RU53_RS10045 PF01479 S4 domain RU53_RS10045 PF00849 RNA pseudouridylate synthase RU53_RS10055 PF00206 Lyase RU53_RS10055 PF10415 Fumarase C C-terminus RU53_RS10080 PF00588 SpoU rRNA Methylase family RU53_RS10085 PF08331 Domain of unknown function (DUF1730) RU53_RS10090 PF00005 ABC transporter RU53_RS10095 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS10255 PF01475 Ferric uptake regulator family RU53_RS10260 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU53_RS10260 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU53_RS10265 PF00578 AhpC/TSA family RU53_RS10270 PF00202 Aminotransferase class-III RU53_RS10275 PF06081 Aromatic acid exporter family member 1 RU53_RS10285 PF00005 ABC transporter RU53_RS10285 PF00664 ABC transporter transmembrane region RU53_RS10290 PF04167 Protein of unknown function (DUF402) RU53_RS10295 PF00730 HhH-GPD superfamily base excision DNA repair protein RU53_RS10295 PF14815 NUDIX domain RU53_RS10295 PF00633 Helix-hairpin-helix motif RU53_RS10300 PF04307 LexA-binding, inner membrane-associated putative hydrolase RU53_RS10315 PF01476 LysM domain RU53_RS10315 PF00005 ABC transporter RU53_RS10325 PF02631 RecX family RU53_RS10330 PF00912 Transglycosylase RU53_RS10335 PF01965 DJ-1/PfpI family RU53_RS10345 PF08756 YfkB-like domain RU53_RS10345 PF04055 Radical SAM superfamily RU53_RS10350 PF03061 Thioesterase superfamily RU53_RS10355 PF02073 Thermophilic metalloprotease (M29) RU53_RS10360 PF06569 Protein of unknown function (DUF1128) RU53_RS10365 PF01451 Low molecular weight phosphotyrosine protein phosphatase RU53_RS10375 PF03631 Virulence factor BrkB RU53_RS10380 PF00196 Bacterial regulatory proteins, luxR family RU53_RS10380 PF00072 Response regulator receiver domain RU53_RS10385 PF07730 Histidine kinase RU53_RS10385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS10400 PF00557 Metallopeptidase family M24 RU53_RS10410 PF06081 Aromatic acid exporter family member 1 RU53_RS10425 PF07685 CobB/CobQ-like glutamine amidotransferase domain RU53_RS10430 PF08245 Mur ligase middle domain RU53_RS10430 PF08353 Domain of unknown function (DUF1727) RU53_RS10435 PF00210 Ferritin-like domain RU53_RS10450 PF00817 impB/mucB/samB family RU53_RS10450 PF11799 impB/mucB/samB family C-terminal domain RU53_RS10460 PF05958 tRNA (Uracil-5-)-methyltransferase RU53_RS10465 PF00781 Diacylglycerol kinase catalytic domain RU53_RS10475 PF02934 GatB/GatE catalytic domain RU53_RS10475 PF02637 GatB domain RU53_RS10480 PF01425 Amidase RU53_RS10485 PF02686 Glu-tRNAGln amidotransferase C subunit RU53_RS10490 PF00474 Sodium:solute symporter family RU53_RS10495 PF07537 CamS sex pheromone cAM373 precursor RU53_RS10500 PF01653 NAD-dependent DNA ligase adenylation domain RU53_RS10500 PF00533 BRCA1 C Terminus (BRCT) domain RU53_RS10500 PF12826 Helix-hairpin-helix motif RU53_RS10500 PF03120 NAD-dependent DNA ligase OB-fold domain RU53_RS10500 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RU53_RS10505 PF00580 UvrD/REP helicase N-terminal domain RU53_RS10505 PF13361 UvrD-like helicase C-terminal domain RU53_RS10510 PF01884 PcrB family RU53_RS10515 PF01371 Trp repressor protein RU53_RS10520 PF00206 Lyase RU53_RS10520 PF10397 Adenylosuccinate lyase C-terminus RU53_RS10525 PF05543 Staphopain peptidase C47 RU53_RS10525 PF14731 Staphopain proregion RU53_RS10540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RU53_RS10545 PF02540 NAD synthase RU53_RS10550 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RU53_RS10550 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain RU53_RS10550 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RU53_RS10555 PF02898 Nitric oxide synthase, oxygenase domain RU53_RS10560 PF01842 ACT domain RU53_RS10560 PF00800 Prephenate dehydratase RU53_RS10570 PF00939 Sodium:sulfate symporter transmembrane region RU53_RS10580 PF00857 Isochorismatase family RU53_RS10585 PF01368 DHH family RU53_RS10585 PF02833 DHHA2 domain RU53_RS10595 PF00171 Aldehyde dehydrogenase family RU53_RS10600 PF10282 Lactonase, 7-bladed beta-propeller RU53_RS10605 PF00589 Phage integrase family RU53_RS10605 PF02899 Phage integrase, N-terminal SAM-like domain RU53_RS10610 PF00589 Phage integrase family RU53_RS10610 PF02899 Phage integrase, N-terminal SAM-like domain RU53_RS10620 PF08863 YolD-like protein RU53_RS10625 PF08139 Prokaryotic membrane lipoprotein lipid attachment site RU53_RS10630 PF05569 BlaR1 peptidase M56 RU53_RS10630 PF00905 Penicillin binding protein transpeptidase domain RU53_RS10635 PF03965 Penicillinase repressor RU53_RS10680 PF00005 ABC transporter RU53_RS10690 PF00005 ABC transporter RU53_RS10695 PF00392 Bacterial regulatory proteins, gntR family RU53_RS10715 PF03642 MAP domain RU53_RS10720 PF03642 MAP domain RU53_RS10725 PF03372 Endonuclease/Exonuclease/phosphatase family RU53_RS10745 PF11546 Staphylococcal complement inhibitor SCIN RU53_RS10750 PF03372 Endonuclease/Exonuclease/phosphatase family RU53_RS10755 PF07968 Leukocidin/Hemolysin toxin family RU53_RS10760 PF07968 Leukocidin/Hemolysin toxin family RU53_RS10765 PF01546 Peptidase family M20/M25/M40 RU53_RS10765 PF07687 Peptidase dimerisation domain RU53_RS10770 PF02386 Cation transport protein RU53_RS10775 PF00118 TCP-1/cpn60 chaperonin family RU53_RS10780 PF00166 Chaperonin 10 Kd subunit RU53_RS10785 PF02517 CPBP intramembrane metalloprotease RU53_RS10800 PF00795 Carbon-nitrogen hydrolase RU53_RS10805 PF05372 Delta lysin family RU53_RS10810 PF04647 Accessory gene regulator B RU53_RS10825 PF00072 Response regulator receiver domain RU53_RS10825 PF04397 LytTr DNA-binding domain RU53_RS10835 PF00294 pfkB family carbohydrate kinase RU53_RS10840 PF08244 Glycosyl hydrolases family 32 C terminal RU53_RS10840 PF00251 Glycosyl hydrolases family 32 N-terminal domain RU53_RS10845 PF13407 Periplasmic binding protein domain RU53_RS10845 PF00356 Bacterial regulatory proteins, lacI family RU53_RS10850 PF00909 Ammonium Transporter Family RU53_RS10855 PF01206 Sulfurtransferase TusA RU53_RS10860 PF04143 Sulphur transport RU53_RS10865 PF02629 CoA binding domain RU53_RS10865 PF06971 Putative DNA-binding protein N-terminus RU53_RS10870 PF00005 ABC transporter RU53_RS10870 PF16326 ABC transporter C-terminal domain RU53_RS10870 PF12848 ABC transporter RU53_RS10880 PF00488 MutS domain V RU53_RS10880 PF05188 MutS domain II RU53_RS10880 PF05190 MutS family domain IV RU53_RS10880 PF05192 MutS domain III RU53_RS10880 PF01624 MutS domain I RU53_RS10885 PF00814 Glycoprotease family RU53_RS10890 PF00583 Acetyltransferase (GNAT) family RU53_RS10895 PF00814 Glycoprotease family RU53_RS10900 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RU53_RS10910 PF00920 Dehydratase family RU53_RS10915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RU53_RS10915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RU53_RS10915 PF00205 Thiamine pyrophosphate enzyme, central domain RU53_RS10925 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RU53_RS10925 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RU53_RS10930 PF08502 LeuA allosteric (dimerisation) domain RU53_RS10930 PF00682 HMGL-like RU53_RS10935 PF00180 Isocitrate/isopropylmalate dehydrogenase RU53_RS10940 PF00330 Aconitase family (aconitate hydratase) RU53_RS10945 PF00694 Aconitase C-terminal domain RU53_RS10950 PF00291 Pyridoxal-phosphate dependent enzyme RU53_RS10950 PF00585 C-terminal regulatory domain of Threonine dehydratase RU53_RS10980 PF10263 SprT-like family RU53_RS10980 PF17283 SprT-like zinc ribbon domain RU53_RS10985 PF17674 HHH domain RU53_RS10985 PF00575 S1 RNA binding domain RU53_RS10985 PF16921 Tex protein YqgF-like domain RU53_RS10985 PF09371 Tex-like protein N-terminal domain RU53_RS10990 PF04545 Sigma-70, region 4 RU53_RS10990 PF04539 Sigma-70 region 3 RU53_RS10990 PF04542 Sigma-70 region 2 RU53_RS10995 PF13581 Histidine kinase-like ATPase domain RU53_RS11000 PF01740 STAS domain RU53_RS11005 PF07228 Stage II sporulation protein E (SpoIIE) RU53_RS11005 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain RU53_RS11015 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RU53_RS11025 PF00842 Alanine racemase, C-terminal domain RU53_RS11025 PF01168 Alanine racemase, N-terminal domain RU53_RS11030 PF01648 4'-phosphopantetheinyl transferase superfamily RU53_RS11040 PF03703 Bacterial PH domain RU53_RS11050 PF02669 K+-transporting ATPase, c chain RU53_RS11060 PF03814 Potassium-transporting ATPase A subunit RU53_RS11070 PF00512 His Kinase A (phospho-acceptor) domain RU53_RS11070 PF02702 Osmosensitive K+ channel His kinase sensor domain RU53_RS11070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS11070 PF13493 Domain of unknown function (DUF4118) RU53_RS11075 PF00072 Response regulator receiver domain RU53_RS11075 PF00486 Transcriptional regulatory protein, C terminal RU53_RS11080 PF00271 Helicase conserved C-terminal domain RU53_RS11080 PF00270 DEAD/DEAH box helicase RU53_RS11085 PF02875 Mur ligase family, glutamate ligase domain RU53_RS11085 PF01225 Mur ligase family, catalytic domain RU53_RS11085 PF08245 Mur ligase middle domain RU53_RS11090 PF01820 D-ala D-ala ligase N-terminus RU53_RS11090 PF07478 D-ala D-ala ligase C-terminus RU53_RS11095 PF01098 Cell cycle protein RU53_RS11110 PF02583 Metal-sensitive transcriptional repressor RU53_RS11115 PF13091 PLD-like domain RU53_RS11115 PF13396 Phospholipase_D-nuclease N-terminal RU53_RS11120 PF01966 HD domain RU53_RS11125 PF02096 60Kd inner membrane protein RU53_RS11130 PF02581 Thiamine monophosphate synthase RU53_RS11135 PF02110 Hydroxyethylthiazole kinase family RU53_RS11140 PF08543 Phosphomethylpyrimidine kinase RU53_RS11145 PF03070 TENA/THI-4/PQQC family RU53_RS11155 PF06737 Transglycosylase-like domain RU53_RS11160 PF00436 Single-strand binding protein family RU53_RS11170 PF07977 FabA-like domain RU53_RS11175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RU53_RS11190 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RU53_RS11190 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RU53_RS11195 PF02874 ATP synthase alpha/beta family, beta-barrel domain RU53_RS11195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RU53_RS11200 PF00231 ATP synthase RU53_RS11205 PF02874 ATP synthase alpha/beta family, beta-barrel domain RU53_RS11205 PF00306 ATP synthase alpha/beta chain, C terminal domain RU53_RS11205 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RU53_RS11210 PF00213 ATP synthase delta (OSCP) subunit RU53_RS11215 PF00430 ATP synthase B/B' CF(0) RU53_RS11220 PF00137 ATP synthase subunit C RU53_RS11225 PF00119 ATP synthase A chain RU53_RS11235 PF02350 UDP-N-acetylglucosamine 2-epimerase RU53_RS11245 PF00464 Serine hydroxymethyltransferase RU53_RS11250 PF04260 Protein of unknown function (DUF436) RU53_RS11255 PF01451 Low molecular weight phosphotyrosine protein phosphatase RU53_RS11260 PF01300 Telomere recombination RU53_RS11260 PF03481 Putative GTP-binding controlling metal-binding RU53_RS11265 PF17827 PrmC N-terminal domain RU53_RS11265 PF05175 Methyltransferase small domain RU53_RS11270 PF03462 PCRF domain RU53_RS11270 PF00472 RF-1 domain RU53_RS11275 PF00265 Thymidine kinase RU53_RS11280 PF01197 Ribosomal protein L31 RU53_RS11285 PF07498 Rho termination factor, N-terminal domain RU53_RS11285 PF07497 Rho termination factor, RNA-binding domain RU53_RS11285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RU53_RS11290 PF00171 Aldehyde dehydrogenase family RU53_RS11300 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RU53_RS11305 PF01116 Fructose-bisphosphate aldolase class-II RU53_RS11315 PF00117 Glutamine amidotransferase class-I RU53_RS11315 PF06418 CTP synthase N-terminus RU53_RS11320 PF05066 HB1, ASXL, restriction endonuclease HTH domain RU53_RS11330 PF03630 Fumble RU53_RS11350 PF02664 S-Ribosylhomocysteinase (LuxS) RU53_RS11360 PF02885 Glycosyl transferase family, helical bundle domain RU53_RS11360 PF00591 Glycosyl transferase family, a/b domain RU53_RS11360 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RU53_RS11370 PF01791 DeoC/LacD family aldolase RU53_RS11375 PF01048 Phosphorylase superfamily RU53_RS11380 PF00210 Ferritin-like domain RU53_RS11400 PF01238 Phosphomannose isomerase type I RU53_RS11405 PF13460 NAD(P)H-binding RU53_RS11410 PF01022 Bacterial regulatory protein, arsR family RU53_RS11415 PF16916 Dimerisation domain of Zinc Transporter RU53_RS11415 PF01545 Cation efflux family RU53_RS11435 PF00005 ABC transporter RU53_RS11440 PF01380 SIS domain RU53_RS11445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RU53_RS11445 PF02378 Phosphotransferase system, EIIC RU53_RS11450 PF00874 PRD domain RU53_RS11450 PF05043 Mga helix-turn-helix domain RU53_RS11450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RU53_RS11450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RU53_RS11450 PF08279 HTH domain RU53_RS11455 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RU53_RS11460 PF01232 Mannitol dehydrogenase Rossmann domain RU53_RS11460 PF08125 Mannitol dehydrogenase C-terminal domain RU53_RS11465 PF01468 GA module RU53_RS11465 PF07564 Domain of Unknown Function (DUF1542) RU53_RS11470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RU53_RS11470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RU53_RS11470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RU53_RS11470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RU53_RS11480 PF02457 DisA bacterial checkpoint controller nucleotide-binding RU53_RS11485 PF00491 Arginase family RU53_RS11540 PF10609 NUBPL iron-transfer P-loop NTPase RU53_RS11545 PF07690 Major Facilitator Superfamily RU53_RS11550 PF17080 Multidrug Resistance efflux pump RU53_RS11555 PF07690 Major Facilitator Superfamily RU53_RS11560 PF03006 Haemolysin-III related RU53_RS11565 PF01704 UTP--glucose-1-phosphate uridylyltransferase RU53_RS11570 PF04307 LexA-binding, inner membrane-associated putative hydrolase RU53_RS11580 PF07670 Nucleoside recognition RU53_RS11585 PF01032 FecCD transport family RU53_RS11590 PF01032 FecCD transport family RU53_RS11595 PF01497 Periplasmic binding protein RU53_RS11605 PF01168 Alanine racemase, N-terminal domain RU53_RS11610 PF06276 Ferric iron reductase FhuF-like transporter RU53_RS11610 PF04183 IucA / IucC family RU53_RS11615 PF05977 Transmembrane secretion effector RU53_RS11625 PF03780 Asp23 family, cell envelope-related function RU53_RS11640 PF02028 BCCT, betaine/carnitine/choline family transporter RU53_RS11645 PF00107 Zinc-binding dehydrogenase RU53_RS11645 PF08240 Alcohol dehydrogenase GroES-like domain RU53_RS11650 PF16884 N-terminal domain of oxidoreductase RU53_RS11650 PF00107 Zinc-binding dehydrogenase RU53_RS11660 PF00232 Glycosyl hydrolase family 1 RU53_RS11665 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RU53_RS11665 PF02378 Phosphotransferase system, EIIC RU53_RS11670 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RU53_RS11675 PF01791 DeoC/LacD family aldolase RU53_RS11680 PF00294 pfkB family carbohydrate kinase RU53_RS11685 PF02502 Ribose/Galactose Isomerase RU53_RS11690 PF02502 Ribose/Galactose Isomerase RU53_RS11695 PF00455 DeoR C terminal sensor domain RU53_RS11695 PF08220 DeoR-like helix-turn-helix domain RU53_RS11700 PF02146 Sir2 family RU53_RS11720 PF00248 Aldo/keto reductase family RU53_RS11725 PF13411 MerR HTH family regulatory protein RU53_RS11735 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain RU53_RS11735 PF02278 Polysaccharide lyase family 8, super-sandwich domain RU53_RS11735 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain RU53_RS11745 PF05116 Sucrose-6F-phosphate phosphohydrolase RU53_RS11755 PF03306 Alpha-acetolactate decarboxylase RU53_RS11760 PF00205 Thiamine pyrophosphate enzyme, central domain RU53_RS11760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RU53_RS11760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RU53_RS11775 PF00380 Ribosomal protein S9/S16 RU53_RS11780 PF00572 Ribosomal protein L13 RU53_RS11785 PF01416 tRNA pseudouridine synthase RU53_RS11790 PF02361 Cobalt transport protein RU53_RS11795 PF00005 ABC transporter RU53_RS11800 PF00005 ABC transporter RU53_RS11805 PF01196 Ribosomal protein L17 RU53_RS11810 PF01000 RNA polymerase Rpb3/RpoA insert domain RU53_RS11810 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RU53_RS11810 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RU53_RS11815 PF00411 Ribosomal protein S11 RU53_RS11820 PF00416 Ribosomal protein S13/S18 RU53_RS11825 PF00444 Ribosomal protein L36 RU53_RS11830 PF01176 Translation initiation factor 1A / IF-1 RU53_RS11835 PF05191 Adenylate kinase, active site lid RU53_RS11840 PF00344 SecY translocase RU53_RS11845 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RU53_RS11850 PF00327 Ribosomal protein L30p/L7e RU53_RS11855 PF00333 Ribosomal protein S5, N-terminal domain RU53_RS11855 PF03719 Ribosomal protein S5, C-terminal domain RU53_RS11860 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RU53_RS11865 PF00347 Ribosomal protein L6 RU53_RS11870 PF00410 Ribosomal protein S8 RU53_RS11875 PF00253 Ribosomal protein S14p/S29e RU53_RS11880 PF00281 Ribosomal protein L5 RU53_RS11880 PF00673 ribosomal L5P family C-terminus RU53_RS11885 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RU53_RS11885 PF00467 KOW motif RU53_RS11890 PF00238 Ribosomal protein L14p/L23e RU53_RS11895 PF00366 Ribosomal protein S17 RU53_RS11900 PF00831 Ribosomal L29 protein RU53_RS11905 PF00252 Ribosomal protein L16p/L10e RU53_RS11910 PF00189 Ribosomal protein S3, C-terminal domain RU53_RS11910 PF07650 KH domain RU53_RS11915 PF00237 Ribosomal protein L22p/L17e RU53_RS11920 PF00203 Ribosomal protein S19 RU53_RS11925 PF00181 Ribosomal Proteins L2, RNA binding domain RU53_RS11925 PF03947 Ribosomal Proteins L2, C-terminal domain RU53_RS11930 PF00276 Ribosomal protein L23 RU53_RS11935 PF00573 Ribosomal protein L4/L1 family RU53_RS11940 PF00297 Ribosomal protein L3 RU53_RS11945 PF00338 Ribosomal protein S10p/S20e RU53_RS11955 PF00860 Permease family RU53_RS11960 PF01751 Toprim domain RU53_RS11960 PF01131 DNA topoisomerase RU53_RS11975 PF06800 Sugar transport protein RU53_RS12000 PF00873 AcrB/AcrD/AcrF family RU53_RS12005 PF02388 FemAB family RU53_RS12020 PF01047 MarR family RU53_RS12030 PF01047 MarR family RU53_RS12050 PF04055 Radical SAM superfamily RU53_RS12050 PF06463 Molybdenum Cofactor Synthesis C RU53_RS12055 PF12804 MobA-like NTP transferase domain RU53_RS12060 PF02597 ThiS family RU53_RS12065 PF02391 MoaE protein RU53_RS12070 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RU53_RS12075 PF00994 Probable molybdopterin binding domain RU53_RS12075 PF03454 MoeA C-terminal region (domain IV) RU53_RS12075 PF03453 MoeA N-terminal region (domain I and II) RU53_RS12080 PF01967 MoaC family RU53_RS12085 PF00994 Probable molybdopterin binding domain RU53_RS12090 PF00899 ThiF family RU53_RS12095 PF00005 ABC transporter RU53_RS12095 PF03459 TOBE domain RU53_RS12100 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS12110 PF02634 FdhD/NarQ family RU53_RS12120 PF02632 BioY family RU53_RS12125 PF01156 Inosine-uridine preferring nucleoside hydrolase RU53_RS12135 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RU53_RS12135 PF02770 Acyl-CoA dehydrogenase, middle domain RU53_RS12135 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RU53_RS12140 PF03253 Urea transporter RU53_RS12145 PF00547 Urease, gamma subunit RU53_RS12150 PF00699 Urease beta subunit RU53_RS12155 PF00449 Urease alpha-subunit, N-terminal domain RU53_RS12155 PF01979 Amidohydrolase family RU53_RS12160 PF02814 UreE urease accessory protein, N-terminal domain RU53_RS12160 PF05194 UreE urease accessory protein, C-terminal domain RU53_RS12165 PF01730 UreF RU53_RS12170 PF02492 CobW/HypB/UreG, nucleotide-binding domain RU53_RS12175 PF01774 UreD urease accessory protein RU53_RS12205 PF05257 CHAP domain RU53_RS12215 PF03553 Na+/H+ antiporter family RU53_RS12220 PF02558 Ketopantoate reductase PanE/ApbA RU53_RS12220 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain RU53_RS12230 PF05257 CHAP domain RU53_RS12240 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU53_RS12240 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU53_RS12245 PF01494 FAD binding domain RU53_RS12250 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RU53_RS12250 PF13457 GW (Gly-Tryp) dipeptide domain RU53_RS12265 PF12838 4Fe-4S dicluster domain RU53_RS12265 PF00384 Molybdopterin oxidoreductase RU53_RS12265 PF01568 Molydopterin dinucleotide binding domain RU53_RS12265 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RU53_RS12265 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RU53_RS12270 PF03816 Cell envelope-related transcriptional attenuator domain RU53_RS12285 PF02517 CPBP intramembrane metalloprotease RU53_RS12300 PF00324 Amino acid permease RU53_RS12320 PF13419 Haloacid dehalogenase-like hydrolase RU53_RS12325 PF01758 Sodium Bile acid symporter family RU53_RS12335 PF00367 phosphotransferase system, EIIB RU53_RS12335 PF02378 Phosphotransferase system, EIIC RU53_RS12340 PF01380 SIS domain RU53_RS12340 PF01418 Helix-turn-helix domain, rpiR family RU53_RS12365 PF01546 Peptidase family M20/M25/M40 RU53_RS12365 PF07687 Peptidase dimerisation domain RU53_RS12370 PF01979 Amidohydrolase family RU53_RS12375 PF17392 Urocanase C-terminal domain RU53_RS12375 PF17391 Urocanase N-terminal domain RU53_RS12375 PF01175 Urocanase Rossmann-like domain RU53_RS12380 PF03466 LysR substrate binding domain RU53_RS12380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU53_RS12385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RU53_RS12390 PF00491 Arginase family RU53_RS12400 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) RU53_RS12405 PF03473 MOSC domain RU53_RS12405 PF03475 3-alpha domain RU53_RS12420 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RU53_RS12430 PF13732 Domain of unknown function (DUF4162) RU53_RS12430 PF00005 ABC transporter RU53_RS12435 PF05656 Protein of unknown function (DUF805) RU53_RS12440 PF02245 Methylpurine-DNA glycosylase (MPG) RU53_RS12445 PF03616 Sodium/glutamate symporter RU53_RS12450 PF01070 FMN-dependent dehydrogenase RU53_RS12455 PF01544 CorA-like Mg2+ transporter protein RU53_RS12470 PF07859 alpha/beta hydrolase fold RU53_RS12470 PF00934 PE family RU53_RS12480 PF07690 Major Facilitator Superfamily RU53_RS12495 PF07690 Major Facilitator Superfamily RU53_RS12515 PF12802 MarR family RU53_RS12525 PF00005 ABC transporter RU53_RS12530 PF02687 FtsX-like permease family RU53_RS12535 PF00486 Transcriptional regulatory protein, C terminal RU53_RS12535 PF00072 Response regulator receiver domain RU53_RS12540 PF00512 His Kinase A (phospho-acceptor) domain RU53_RS12540 PF00672 HAMP domain RU53_RS12540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS12545 PF04397 LytTr DNA-binding domain RU53_RS12555 PF06039 Malate:quinone oxidoreductase (Mqo) RU53_RS12560 PF02652 L-lactate permease RU53_RS12565 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RU53_RS12575 PF13673 Acetyltransferase (GNAT) domain RU53_RS12580 PF00107 Zinc-binding dehydrogenase RU53_RS12580 PF08240 Alcohol dehydrogenase GroES-like domain RU53_RS12585 PF00186 Dihydrofolate reductase RU53_RS12605 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS12640 PF00367 phosphotransferase system, EIIB RU53_RS12640 PF02378 Phosphotransferase system, EIIC RU53_RS12655 PF16242 Pyridoxamine 5'-phosphate oxidase like RU53_RS12670 PF00375 Sodium:dicarboxylate symporter family RU53_RS12680 PF01047 MarR family RU53_RS12685 PF00011 Hsp20/alpha crystallin family RU53_RS12690 PF07690 Major Facilitator Superfamily RU53_RS12700 PF07739 TipAS antibiotic-recognition domain RU53_RS12700 PF13411 MerR HTH family regulatory protein RU53_RS12705 PF00196 Bacterial regulatory proteins, luxR family RU53_RS12705 PF00072 Response regulator receiver domain RU53_RS12710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS12710 PF07730 Histidine kinase RU53_RS12720 PF02665 Nitrate reductase gamma subunit RU53_RS12730 PF14711 Respiratory nitrate reductase beta C-terminal RU53_RS12730 PF13247 4Fe-4S dicluster domain RU53_RS12735 PF01568 Molydopterin dinucleotide binding domain RU53_RS12735 PF14710 Respiratory nitrate reductase alpha N-terminal RU53_RS12735 PF00384 Molybdopterin oxidoreductase RU53_RS12740 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RU53_RS12745 PF00355 Rieske [2Fe-2S] domain RU53_RS12750 PF04324 BFD-like [2Fe-2S] binding domain RU53_RS12750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RU53_RS12750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RU53_RS12750 PF18267 Rubredoxin NAD+ reductase C-terminal domain RU53_RS12750 PF07992 Pyridine nucleotide-disulphide oxidoreductase RU53_RS12760 PF00583 Acetyltransferase (GNAT) family RU53_RS12765 PF01226 Formate/nitrite transporter RU53_RS12780 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment RU53_RS12780 PF01297 Zinc-uptake complex component A periplasmic RU53_RS12785 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system RU53_RS12810 PF02388 FemAB family RU53_RS12815 PF00005 ABC transporter RU53_RS12820 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS12825 PF00497 Bacterial extracellular solute-binding proteins, family 3 RU53_RS12830 PF07690 Major Facilitator Superfamily RU53_RS12840 PF00300 Histidine phosphatase superfamily (branch 1) RU53_RS12845 PF01545 Cation efflux family RU53_RS12845 PF16916 Dimerisation domain of Zinc Transporter RU53_RS12855 PF02216 B domain RU53_RS12855 PF11621 C3 binding domain 4 of IgG-bind protein SBI RU53_RS12865 PF07968 Leukocidin/Hemolysin toxin family RU53_RS12870 PF07968 Leukocidin/Hemolysin toxin family RU53_RS12875 PF07968 Leukocidin/Hemolysin toxin family RU53_RS12885 PF03744 6-carboxyhexanoate--CoA ligase RU53_RS12890 PF00155 Aminotransferase class I and II RU53_RS12895 PF04055 Radical SAM superfamily RU53_RS12895 PF06968 Biotin and Thiamin Synthesis associated domain RU53_RS12900 PF00202 Aminotransferase class-III RU53_RS12920 PF00005 ABC transporter RU53_RS12920 PF00664 ABC transporter transmembrane region RU53_RS12925 PF04954 Siderophore-interacting protein RU53_RS12925 PF08021 Siderophore-interacting FAD-binding domain RU53_RS12925 PF00005 ABC transporter RU53_RS12925 PF00664 ABC transporter transmembrane region RU53_RS12945 PF02595 Glycerate kinase family RU53_RS12955 PF07690 Major Facilitator Superfamily RU53_RS12975 PF00324 Amino acid permease RU53_RS12980 PF00999 Sodium/hydrogen exchanger family RU53_RS12990 PF13520 Amino acid permease RU53_RS13000 PF00144 Beta-lactamase RU53_RS13015 PF08546 Ketopantoate reductase PanE/ApbA C terminal RU53_RS13015 PF02558 Ketopantoate reductase PanE/ApbA RU53_RS13020 PF07690 Major Facilitator Superfamily RU53_RS13025 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS13030 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RU53_RS13035 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS13040 PF00571 CBS domain RU53_RS13040 PF00005 ABC transporter RU53_RS13055 PF08818 Domain of unknown function (DU1801) RU53_RS13060 PF13520 Amino acid permease RU53_RS13065 PF00135 Carboxylesterase family RU53_RS13070 PF07690 Major Facilitator Superfamily RU53_RS13075 PF03649 Uncharacterised protein family (UPF0014) RU53_RS13080 PF00005 ABC transporter RU53_RS13085 PF05343 M42 glutamyl aminopeptidase RU53_RS13090 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system RU53_RS13105 PF06998 Protein of unknown function (DUF1307) RU53_RS13110 PF01645 Conserved region in glutamate synthase RU53_RS13120 PF07690 Major Facilitator Superfamily RU53_RS13125 PF00005 ABC transporter RU53_RS13130 PF00005 ABC transporter RU53_RS13135 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS13135 PF12911 N-terminal TM domain of oligopeptide transport permease C RU53_RS13140 PF00528 Binding-protein-dependent transport system inner membrane component RU53_RS13145 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RU53_RS13150 PF10100 Staphylopine dehydrogenase RU53_RS13185 PF03806 AbgT putative transporter family RU53_RS13190 PF02627 Carboxymuconolactone decarboxylase family RU53_RS13220 PF04507 Csa1 family RU53_RS13225 PF04507 Csa1 family RU53_RS13245 PF04507 Csa1 family RU53_RS13250 PF04507 Csa1 family RU53_RS13260 PF00293 NUDIX domain RU53_RS13265 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RU53_RS13265 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RU53_RS13265 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RU53_RS13265 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RU53_RS13290 PF17041 E domain RU53_RS13290 PF04650 YSIRK type signal peptide RU53_RS13290 PF00746 LPXTG cell wall anchor motif RU53_RS13290 PF07501 G5 domain RU53_RS13295 PF13463 Winged helix DNA-binding domain RU53_RS13305 PF00483 Nucleotidyl transferase RU53_RS13310 PF00746 LPXTG cell wall anchor motif RU53_RS13310 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RU53_RS13310 PF02986 Fibronectin binding repeat RU53_RS13310 PF17961 Bacterial Ig domain RU53_RS13310 PF04650 YSIRK type signal peptide RU53_RS13315 PF02986 Fibronectin binding repeat RU53_RS13315 PF00746 LPXTG cell wall anchor motif RU53_RS13315 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RU53_RS13315 PF04650 YSIRK type signal peptide RU53_RS13315 PF17961 Bacterial Ig domain RU53_RS13330 PF02447 GntP family permease RU53_RS13335 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RU53_RS13335 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RU53_RS13340 PF07729 FCD domain RU53_RS13340 PF00392 Bacterial regulatory proteins, gntR family RU53_RS13345 PF13411 MerR HTH family regulatory protein RU53_RS13350 PF04607 Region found in RelA / SpoT proteins RU53_RS13355 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) RU53_RS13365 PF07690 Major Facilitator Superfamily RU53_RS13370 PF09335 SNARE associated Golgi protein RU53_RS13380 PF00005 ABC transporter RU53_RS13390 PF06874 Firmicute fructose-1,6-bisphosphatase RU53_RS13405 PF01738 Dienelactone hydrolase family RU53_RS13410 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RU53_RS13415 PF01047 MarR family RU53_RS13425 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RU53_RS13430 PF00881 Nitroreductase family RU53_RS13435 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU53_RS13435 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU53_RS13445 PF00005 ABC transporter RU53_RS13455 PF04203 Sortase domain RU53_RS13475 PF03313 Serine dehydratase alpha chain RU53_RS13480 PF03315 Serine dehydratase beta chain RU53_RS13480 PF01842 ACT domain RU53_RS13495 PF00892 EamA-like transporter family RU53_RS13500 PF07859 alpha/beta hydrolase fold RU53_RS13500 PF00934 PE family RU53_RS13515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RU53_RS13515 PF02378 Phosphotransferase system, EIIC RU53_RS13515 PF00367 phosphotransferase system, EIIB RU53_RS13520 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RU53_RS13520 PF00205 Thiamine pyrophosphate enzyme, central domain RU53_RS13520 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RU53_RS13525 PF04172 LrgB-like family RU53_RS13530 PF03788 LrgA family RU53_RS13535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RU53_RS13535 PF03466 LysR substrate binding domain RU53_RS13545 PF05257 CHAP domain RU53_RS13550 PF00368 Hydroxymethylglutaryl-coenzyme A reductase RU53_RS13555 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal RU53_RS13555 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal RU53_RS13560 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RU53_RS13560 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RU53_RS13565 PF00004 ATPase family associated with various cellular activities (AAA) RU53_RS13565 PF17871 AAA lid domain RU53_RS13565 PF10431 C-terminal, D2-small domain, of ClpB protein RU53_RS13565 PF07724 AAA domain (Cdc48 subfamily) RU53_RS13575 PF02421 Ferrous iron transport protein B RU53_RS13575 PF07670 Nucleoside recognition RU53_RS13575 PF17910 FeoB cytosolic helical domain RU53_RS13575 PF07664 Ferrous iron transport protein B C terminus RU53_RS13585 PF03176 MMPL family RU53_RS13600 PF00171 Aldehyde dehydrogenase family RU53_RS13605 PF00132 Bacterial transferase hexapeptide (six repeats) RU53_RS13605 PF14602 Hexapeptide repeat of succinyl-transferase RU53_RS13605 PF12464 Maltose acetyltransferase RU53_RS13615 PF00403 Heavy-metal-associated domain RU53_RS13620 PF00403 Heavy-metal-associated domain RU53_RS13625 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RU53_RS13625 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RU53_RS13630 PF00155 Aminotransferase class I and II RU53_RS13635 PF01593 Flavin containing amine oxidoreductase RU53_RS13645 PF00535 Glycosyl transferase family 2 RU53_RS13650 PF01593 Flavin containing amine oxidoreductase RU53_RS13665 PF01757 Acyltransferase family RU53_RS13670 PF01464 Transglycosylase SLT domain RU53_RS13700 PF05979 Bacterial protein of unknown function (DUF896) RU53_RS13720 PF00440 Bacterial regulatory proteins, tetR family RU53_RS13725 PF00106 short chain dehydrogenase RU53_RS13735 PF00561 alpha/beta hydrolase fold RU53_RS13740 PF07683 Cobalamin synthesis protein cobW C-terminal domain RU53_RS13740 PF02492 CobW/HypB/UreG, nucleotide-binding domain RU53_RS13770 PF03881 Fructosamine kinase RU53_RS13775 PF01180 Dihydroorotate dehydrogenase RU53_RS13785 PF02677 Epoxyqueuosine reductase QueH RU53_RS13815 PF00089 Trypsin RU53_RS13820 PF02261 Aspartate decarboxylase RU53_RS13825 PF02569 Pantoate-beta-alanine ligase RU53_RS13830 PF02548 Ketopantoate hydroxymethyltransferase RU53_RS13835 PF02558 Ketopantoate reductase PanE/ApbA RU53_RS13835 PF08546 Ketopantoate reductase PanE/ApbA C terminal RU53_RS13840 PF03306 Alpha-acetolactate decarboxylase RU53_RS13845 PF00056 lactate/malate dehydrogenase, NAD binding domain RU53_RS13845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RU53_RS13855 PF13520 Amino acid permease RU53_RS13860 PF00202 Aminotransferase class-III RU53_RS13870 PF00274 Fructose-bisphosphate aldolase class-I RU53_RS13875 PF06039 Malate:quinone oxidoreductase (Mqo) RU53_RS13885 PF13193 AMP-binding enzyme C-terminal domain RU53_RS13885 PF00501 AMP-binding enzyme RU53_RS13900 PF00732 GMC oxidoreductase RU53_RS13900 PF05199 GMC oxidoreductase RU53_RS13905 PF00171 Aldehyde dehydrogenase family RU53_RS13925 PF02028 BCCT, betaine/carnitine/choline family transporter RU53_RS13945 PF13597 Anaerobic ribonucleoside-triphosphate reductase RU53_RS13945 PF03477 ATP cone domain RU53_RS13950 PF03600 Citrate transporter RU53_RS13955 PF14824 Sirohaem biosynthesis protein central RU53_RS13960 PF00258 Flavodoxin RU53_RS13960 PF00175 Oxidoreductase NAD-binding domain RU53_RS13960 PF00667 FAD binding domain RU53_RS13970 PF00255 Glutathione peroxidase RU53_RS13995 PF00005 ABC transporter RU53_RS14000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RU53_RS14005 PF00072 Response regulator receiver domain RU53_RS14005 PF00486 Transcriptional regulatory protein, C terminal RU53_RS14020 PF00245 Alkaline phosphatase RU53_RS14025 PF01047 MarR family RU53_RS14035 PF04650 YSIRK type signal peptide RU53_RS14035 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RU53_RS14035 PF00746 LPXTG cell wall anchor motif RU53_RS14035 PF17961 Bacterial Ig domain RU53_RS14040 PF13545 Crp-like helix-turn-helix domain RU53_RS14040 PF00027 Cyclic nucleotide-binding domain RU53_RS14045 PF00696 Amino acid kinase family RU53_RS14050 PF13520 Amino acid permease RU53_RS14055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RU53_RS14055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RU53_RS14070 PF01316 Arginine repressor, DNA binding domain RU53_RS14070 PF02863 Arginine repressor, C-terminal domain RU53_RS14075 PF02868 Thermolysin metallopeptidase, alpha-helical domain RU53_RS14075 PF01447 Thermolysin metallopeptidase, catalytic domain RU53_RS14075 PF07504 Fungalysin/Thermolysin Propeptide Motif RU53_RS14075 PF03413 Peptidase propeptide and YPEB domain RU53_RS14090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RU53_RS14090 PF00874 PRD domain RU53_RS14090 PF05043 Mga helix-turn-helix domain RU53_RS14090 PF08279 HTH domain RU53_RS14095 PF02378 Phosphotransferase system, EIIC RU53_RS14095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RU53_RS14095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RU53_RS14100 PF01238 Phosphomannose isomerase type I RU53_RS14105 PF01061 ABC-2 type transporter RU53_RS14110 PF05257 CHAP domain RU53_RS14110 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RU53_RS14115 PF00857 Isochorismatase family RU53_RS14115 PF00550 Phosphopantetheine attachment site RU53_RS14120 PF01468 GA module RU53_RS14130 PF00534 Glycosyl transferases group 1 RU53_RS14135 PF07517 SecA DEAD-like domain RU53_RS14135 PF01043 SecA preprotein cross-linking domain RU53_RS14135 PF07516 SecA Wing and Scaffold domain RU53_RS14140 PF15432 Accessory Sec secretory system ASP3 RU53_RS14145 PF16929 Accessory Sec system GspB-transporter RU53_RS14150 PF16993 Accessory Sec system protein Asp1 RU53_RS14155 PF00344 SecY translocase RU53_RS14160 PF00746 LPXTG cell wall anchor motif RU53_RS14160 PF00746 LPXTG cell wall anchor motif RU53_RS14165 PF01613 Flavin reductase like domain RU53_RS14190 PF01613 Flavin reductase like domain RU53_RS14195 PF01625 Peptide methionine sulfoxide reductase RU53_RS14195 PF01641 SelR domain RU53_RS14210 PF13614 AAA domain RU53_RS14215 PF02706 Chain length determinant protein RU53_RS14220 PF00440 Bacterial regulatory proteins, tetR family RU53_RS14220 PF18665 Tetracyclin repressor-like, C-terminal domain RU53_RS14225 PF00535 Glycosyl transferase family 2 RU53_RS14235 PF01522 Polysaccharide deacetylase RU53_RS14240 PF01757 Acyltransferase family RU53_RS14250 PF04650 YSIRK type signal peptide RU53_RS14260 PF01502 Phosphoribosyl-AMP cyclohydrolase RU53_RS14260 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RU53_RS14265 PF00977 Histidine biosynthesis protein RU53_RS14270 PF00977 Histidine biosynthesis protein RU53_RS14275 PF00117 Glutamine amidotransferase class-I RU53_RS14280 PF00475 Imidazoleglycerol-phosphate dehydratase RU53_RS14285 PF00155 Aminotransferase class I and II RU53_RS14290 PF00815 Histidinol dehydrogenase RU53_RS14295 PF01634 ATP phosphoribosyltransferase RU53_RS14300 PF13393 Histidyl-tRNA synthetase RU53_RS14320 PF12558 ATP-binding cassette cobalt transporter RU53_RS14320 PF00005 ABC transporter RU53_RS14325 PF07155 ECF-type riboflavin transporter, S component RU53_RS14335 PF04264 YceI-like domain RU53_RS14340 PF08450 SMP-30/Gluconolactonase/LRE-like region RU53_RS14345 PF00581 Rhodanese-like domain RU53_RS14345 PF12368 Rhodanase C-terminal RU53_RS14345 PF17773 UPF0176 acylphosphatase like domain RU53_RS14350 PF01470 Pyroglutamyl peptidase RU53_RS14360 PF17802 Prealbumin-like fold domain RU53_RS14360 PF05738 Cna protein B-type domain RU53_RS14360 PF05737 Collagen binding domain RU53_RS14360 PF17802 Prealbumin-like fold domain RU53_RS14360 PF05738 Cna protein B-type domain RU53_RS14360 PF05737 Collagen binding domain RU53_RS14365 PF00939 Sodium:sulfate symporter transmembrane region RU53_RS14370 PF00892 EamA-like transporter family RU53_RS14380 PF03824 High-affinity nickel-transport protein RU53_RS14385 PF00797 N-acetyltransferase RU53_RS14395 PF00005 ABC transporter RU53_RS14400 PF02687 FtsX-like permease family RU53_RS14430 PF00313 'Cold-shock' DNA-binding domain RU53_RS14450 PF02195 ParB-like nuclease domain RU53_RS14450 PF17762 HTH domain found in ParB protein RU53_RS14455 PF02527 rRNA small subunit methyltransferase G RU53_RS14460 PF01134 Glucose inhibited division protein A RU53_RS14460 PF13932 GidA associated domain RU53_RS14465 PF01926 50S ribosome-binding GTPase RU53_RS14465 PF12631 MnmE helical domain RU53_RS14465 PF10396 GTP-binding protein TrmE N-terminus RU53_RS14470 PF00825 Ribonuclease P RU53_RS14475 PF00468 Ribosomal protein L34