SAJPND4_RS00005 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain SAJPND4_RS00010 SM00480 DNA polymerase III beta subunit SAJPND4_RS00025 SM00387 Histidine kinase-like ATPases SAJPND4_RS00025 SM00433 TopoisomeraseII SAJPND4_RS00030 SM00434 DNA Topoisomerase IV SAJPND4_RS00070 SM00267 diguanylate cyclase SAJPND4_RS00085 SM00788 Adenylosuccinate synthetase SAJPND4_RS00100 SM00448 cheY-homologous receiver domain SAJPND4_RS00100 SM00862 Transcriptional regulatory protein, C terminal SAJPND4_RS00105 SM00091 PAS domain SAJPND4_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SAJPND4_RS00105 SM00387 Histidine kinase-like ATPases SAJPND4_RS00105 SM00388 His Kinase A (phosphoacceptor) domain SAJPND4_RS00120 SM00849 Metallo-beta-lactamase superfamily SAJPND4_RS00230 SM00857 Resolvase, N terminal domain SAJPND4_RS00235 SM00857 Resolvase, N terminal domain SAJPND4_RS00330 SM00148 Phospholipase C, catalytic domain (part); domain X SAJPND4_RS00355 SM00342 helix_turn_helix, arabinose operon control protein SAJPND4_RS00385 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAJPND4_RS00405 SM00257 Lysin motif SAJPND4_RS00410 SM00347 helix_turn_helix multiple antibiotic resistance protein SAJPND4_RS00470 SM00470 ParB-like nuclease domain SAJPND4_RS00490 SM00822 SAJPND4_RS00490 SAJPND4_RS00535 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAJPND4_RS00555 SM01133 SAJPND4_RS00555 SAJPND4_RS00575 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS00580 SM00062 Bacterial periplasmic substrate-binding proteins SAJPND4_RS00695 SM00984 UDP binding domain SAJPND4_RS00735 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS00795 SM00859 Semialdehyde dehydrogenase, NAD binding domain SAJPND4_RS00855 SM00487 DEAD-like helicases superfamily SAJPND4_RS00875 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS00915 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS00960 SM00342 helix_turn_helix, arabinose operon control protein SAJPND4_RS00960 SM00448 cheY-homologous receiver domain SAJPND4_RS01035 SM00882 Coenzyme A transferase SAJPND4_RS01110 SM00829 Enoylreductase SAJPND4_RS01120 SM00829 Enoylreductase SAJPND4_RS01175 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SAJPND4_RS01175 SM00387 Histidine kinase-like ATPases SAJPND4_RS01180 SM00448 cheY-homologous receiver domain SAJPND4_RS01180 SM00850 LytTr DNA-binding domain SAJPND4_RS01195 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAJPND4_RS01195 SM00866 SAJPND4_RS01195 SAJPND4_RS01235 SM00354 helix_turn _helix lactose operon repressor SAJPND4_RS01270 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS01495 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS01525 SM01130 SAJPND4_RS01525 SAJPND4_RS01580 SM00506 Appr-1"-p processing enzyme SAJPND4_RS01620 SM00347 helix_turn_helix multiple antibiotic resistance protein SAJPND4_RS01700 SM00530 Helix-turn-helix XRE-family like proteins SAJPND4_RS01710 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS01760 SM00470 ParB-like nuclease domain SAJPND4_RS01840 SM00855 Phosphoglycerate mutase family SAJPND4_RS01910 SM00116 Domain in cystathionine beta-synthase and other proteins. SAJPND4_RS01910 SM01240 SAJPND4_RS01910 SAJPND4_RS02140 SM00833 Cobalamin synthesis protein cobW C-terminal domain SAJPND4_RS02170 SM00014 Acid phosphatase homologues SAJPND4_RS02200 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS02200 SM00930 SAJPND4_RS02200 SAJPND4_RS02215 SM00257 Lysin motif SAJPND4_RS02270 SM00642 Alpha-amylase domain SAJPND4_RS02275 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAJPND4_RS02275 SM00866 SAJPND4_RS02275 SAJPND4_RS02295 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS02305 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAJPND4_RS02305 SM00493 SAJPND4_RS02305 SAJPND4_RS02370 SM00465 GIY-YIG type nucleases (URI domain) SAJPND4_RS02395 SM00493 SAJPND4_RS02395 SAJPND4_RS02400 SM00650 Ribosomal RNA adenine dimethylases SAJPND4_RS02440 SM01400 SAJPND4_RS02440 SAJPND4_RS02460 SM00487 DEAD-like helicases superfamily SAJPND4_RS02460 SM00490 helicase superfamily c-terminal domain SAJPND4_RS02460 SM00982 SAJPND4_RS02460 SAJPND4_RS02460 SM01058 CarD-like/TRCF domain SAJPND4_RS02475 SM00363 S4 RNA-binding domain SAJPND4_RS02485 SM00316 Ribosomal protein S1-like RNA-binding domain SAJPND4_RS02490 SM00977 TilS substrate C-terminal domain SAJPND4_RS02500 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS02520 SM00905 Dihydroneopterin aldolase SAJPND4_RS02600 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAJPND4_RS02635 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS02635 SM01086 C-terminal, D2-small domain, of ClpB protein SAJPND4_RS02645 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS02650 SM00670 Large family of predicted nucleotide-binding domains SAJPND4_RS02665 SM00840 SAJPND4_RS02665 SAJPND4_RS02675 SM00967 RNA 2'-O ribose methyltransferase substrate binding SAJPND4_RS02695 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SAJPND4_RS02695 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SAJPND4_RS02700 SM00649 Ribosomal protein L11/L12 SAJPND4_RS02730 SM00663 RNA polymerase I subunit A N-terminus SAJPND4_RS02750 SM00838 Elongation factor G C-terminus SAJPND4_RS02750 SM00889 Elongation factor G, domain IV SAJPND4_RS02865 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SAJPND4_RS02915 SM00986 Uracil DNA glycosylase superfamily SAJPND4_RS02915 SM00987 UreE urease accessory protein, C-terminal domain SAJPND4_RS03035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAJPND4_RS03045 SM00829 Enoylreductase SAJPND4_RS03060 SM00836 DALR anticodon binding domain SAJPND4_RS03060 SM01016 Arginyl tRNA synthetase N terminal dom SAJPND4_RS03065 SM00478 endonuclease III SAJPND4_RS03180 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS03185 SM00529 Helix-turn-helix diphteria tox regulatory element SAJPND4_RS03185 SM00899 SAJPND4_RS03185 SAJPND4_RS03200 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS03230 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS03250 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS03270 SM01120 SAJPND4_RS03270 SAJPND4_RS03315 SM00448 cheY-homologous receiver domain SAJPND4_RS03315 SM00862 Transcriptional regulatory protein, C terminal SAJPND4_RS03320 SM00387 Histidine kinase-like ATPases SAJPND4_RS03325 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS03345 SM00257 Lysin motif SAJPND4_RS03355 SM00342 helix_turn_helix, arabinose operon control protein SAJPND4_RS03450 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS03455 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS03460 SM00347 helix_turn_helix multiple antibiotic resistance protein SAJPND4_RS03465 SM00833 Cobalamin synthesis protein cobW C-terminal domain SAJPND4_RS03520 SM00420 helix_turn_helix, Deoxyribose operon repressor SAJPND4_RS03520 SM01134 SAJPND4_RS03520 SAJPND4_RS03545 SM01091 Transporter associated domain SAJPND4_RS03560 SM00387 Histidine kinase-like ATPases SAJPND4_RS03560 SM00388 His Kinase A (phosphoacceptor) domain SAJPND4_RS03565 SM00448 cheY-homologous receiver domain SAJPND4_RS03565 SM00862 Transcriptional regulatory protein, C terminal SAJPND4_RS03620 SM00796 Allophanate hydrolase subunit 1 SAJPND4_RS03625 SM00797 Allophanate hydrolase subunit 2 SAJPND4_RS03640 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS03645 SM00341 Helicase and RNase D C-terminal SAJPND4_RS03645 SM00487 DEAD-like helicases superfamily SAJPND4_RS03645 SM00490 helicase superfamily c-terminal domain SAJPND4_RS03645 SM00956 SAJPND4_RS03645 SAJPND4_RS03650 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS03675 SM00046 Diacylglycerol kinase catalytic domain (presumed) SAJPND4_RS03730 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS03785 SM00267 diguanylate cyclase SAJPND4_RS03805 SM00487 DEAD-like helicases superfamily SAJPND4_RS03805 SM00490 helicase superfamily c-terminal domain SAJPND4_RS03820 SM00957 SecA DEAD-like domain SAJPND4_RS03820 SM00958 SecA preprotein cross-linking domain SAJPND4_RS03830 SM00937 SAJPND4_RS03830 SAJPND4_RS03840 SM00257 Lysin motif SAJPND4_RS03855 SM00487 DEAD-like helicases superfamily SAJPND4_RS03855 SM00490 helicase superfamily c-terminal domain SAJPND4_RS03880 SM00028 Tetratricopeptide repeats SAJPND4_RS03935 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAJPND4_RS03955 SM01192 SAJPND4_RS03955 SAJPND4_RS03955 SM01193 SAJPND4_RS03955 SAJPND4_RS03975 SM00316 Ribosomal protein S1-like RNA-binding domain SAJPND4_RS03975 SM00357 Cold shock protein domain SAJPND4_RS03975 SM00955 SAJPND4_RS03975 SAJPND4_RS04030 SM00318 Staphylococcal nuclease homologues SAJPND4_RS04035 SM00357 Cold shock protein domain SAJPND4_RS04075 SM00855 Phosphoglycerate mutase family SAJPND4_RS04135 SM00493 SAJPND4_RS04135 SAJPND4_RS04145 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS04145 SM00930 SAJPND4_RS04145 SAJPND4_RS04170 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS04230 SM00729 Elongator protein 3, MiaB family, Radical SAM SAJPND4_RS04375 SM01298 SAJPND4_RS04375 SAJPND4_RS04385 SM00316 Ribosomal protein S1-like RNA-binding domain SAJPND4_RS04400 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SAJPND4_RS04500 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS04500 SM01086 C-terminal, D2-small domain, of ClpB protein SAJPND4_RS04545 SM00825 Beta-ketoacyl synthase SAJPND4_RS04565 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS04570 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS04585 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS04590 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS04650 SM01118 SAJPND4_RS04650 SAJPND4_RS04660 SM00954 Region found in RelA / SpoT proteins SAJPND4_RS04675 SM00116 Domain in cystathionine beta-synthase and other proteins. SAJPND4_RS04675 SM00924 MgtE intracellular N domain SAJPND4_RS04760 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SAJPND4_RS04790 SM00914 SAJPND4_RS04790 SAJPND4_RS04830 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS04915 SM00347 helix_turn_helix multiple antibiotic resistance protein SAJPND4_RS04925 SM00047 Lysozyme subfamily 2 SAJPND4_RS04925 SM00644 SAJPND4_RS04925 SAJPND4_RS04985 SM01001 AIR carboxylase SAJPND4_RS05005 SM01211 SAJPND4_RS05005 SAJPND4_RS05030 SM00798 AICARFT/IMPCHase bienzyme SAJPND4_RS05030 SM00851 MGS-like domain SAJPND4_RS05035 SM01209 SAJPND4_RS05035 SAJPND4_RS05035 SM01210 SAJPND4_RS05035 SAJPND4_RS05045 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS05110 SM00849 Metallo-beta-lactamase superfamily SAJPND4_RS05140 SM00861 Transketolase, pyrimidine binding domain SAJPND4_RS05160 SM00530 Helix-turn-helix XRE-family like proteins SAJPND4_RS05165 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS05215 SM00838 Elongation factor G C-terminus SAJPND4_RS05240 SM00878 Biotin carboxylase C-terminal domain SAJPND4_RS05320 SM00725 NEAr Transporter domain SAJPND4_RS05325 SM00725 NEAr Transporter domain SAJPND4_RS05330 SM00725 NEAr Transporter domain SAJPND4_RS05365 SM00967 RNA 2'-O ribose methyltransferase substrate binding SAJPND4_RS05375 SM00873 B3/4 domain SAJPND4_RS05375 SM00874 tRNA synthetase B5 domain SAJPND4_RS05375 SM00896 Ferredoxin-fold anticodon binding domain SAJPND4_RS05395 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAJPND4_RS05395 SM00481 DNA polymerase alpha chain like domain SAJPND4_RS05395 SM00483 DNA polymerase X family SAJPND4_RS05400 SM00463 Small MutS-related domain SAJPND4_RS05400 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SAJPND4_RS05400 SM00534 ATPase domain of DNA mismatch repair MUTS family SAJPND4_RS05415 SM00465 GIY-YIG type nucleases (URI domain) SAJPND4_RS05615 SM00740 SAJPND4_RS05615 SAJPND4_RS05635 SM00842 Cell division protein FtsA SAJPND4_RS05640 SM00864 Tubulin/FtsZ family, GTPase domain SAJPND4_RS05640 SM00865 Tubulin/FtsZ family, C-terminal domain SAJPND4_RS05665 SM00363 S4 RNA-binding domain SAJPND4_RS05695 SM00363 S4 RNA-binding domain SAJPND4_RS05720 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SAJPND4_RS05725 SM00851 MGS-like domain SAJPND4_RS05725 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SAJPND4_RS05725 SM01209 SAJPND4_RS05725 SAJPND4_RS05730 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SAJPND4_RS05755 SM00072 Guanylate kinase homologues. SAJPND4_RS05760 SM01409 SAJPND4_RS05760 SAJPND4_RS05770 SM00487 DEAD-like helicases superfamily SAJPND4_RS05770 SM00490 helicase superfamily c-terminal domain SAJPND4_RS05805 SM00331 Sigma factor PP2C-like phosphatases SAJPND4_RS05805 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SAJPND4_RS05810 SM00220 Serine/Threonine protein kinases, catalytic domain SAJPND4_RS05810 SM00740 SAJPND4_RS05810 SAJPND4_RS05825 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SAJPND4_RS05840 SM01120 SAJPND4_RS05840 SAJPND4_RS05840 SM01121 SAJPND4_RS05840 SAJPND4_RS05845 SM00487 DEAD-like helicases superfamily SAJPND4_RS05845 SM00490 helicase superfamily c-terminal domain SAJPND4_RS05860 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SAJPND4_RS05865 SM00822 SAJPND4_RS05865 SAJPND4_RS05880 SM00358 Double-stranded RNA binding motif SAJPND4_RS05880 SM00535 Ribonuclease III family SAJPND4_RS05885 SM00968 SMC proteins Flexible Hinge Domain SAJPND4_RS05890 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS05890 SM00962 SRP54-type protein, GTPase domain SAJPND4_RS05890 SM00963 SRP54-type protein, helical bundle domain SAJPND4_RS05900 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS05900 SM00962 SRP54-type protein, GTPase domain SAJPND4_RS05900 SM00963 SRP54-type protein, helical bundle domain SAJPND4_RS05945 SM00881 CoA binding domain SAJPND4_RS05950 SM00257 Lysin motif SAJPND4_RS05985 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS05985 SM01086 C-terminal, D2-small domain, of ClpB protein SAJPND4_RS06045 SM00479 SAJPND4_RS06045 SAJPND4_RS06045 SM00481 DNA polymerase alpha chain like domain SAJPND4_RS06055 SM00316 Ribosomal protein S1-like RNA-binding domain SAJPND4_RS06055 SM00322 K homology RNA-binding domain SAJPND4_RS06085 SM00904 Riboflavin kinase SAJPND4_RS06090 SM01387 SAJPND4_RS06090 SAJPND4_RS06095 SM00316 Ribosomal protein S1-like RNA-binding domain SAJPND4_RS06095 SM00322 K homology RNA-binding domain SAJPND4_RS06100 SM00849 Metallo-beta-lactamase superfamily SAJPND4_RS06105 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS06105 SM00843 SAJPND4_RS06105 SAJPND4_RS06110 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAJPND4_RS06110 SM00866 SAJPND4_RS06110 SAJPND4_RS06135 SM00530 Helix-turn-helix XRE-family like proteins SAJPND4_RS06145 SM00852 Probable molybdopterin binding domain SAJPND4_RS06150 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS06155 SM00322 K homology RNA-binding domain SAJPND4_RS06155 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAJPND4_RS06185 SM00729 Elongator protein 3, MiaB family, Radical SAM SAJPND4_RS06200 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SAJPND4_RS06200 SM00534 ATPase domain of DNA mismatch repair MUTS family SAJPND4_RS06205 SM00853 MutL C terminal dimerisation domain SAJPND4_RS06205 SM01340 SAJPND4_RS06205 SAJPND4_RS06260 SM00422 helix_turn_helix, mercury resistance SAJPND4_RS06265 SM01230 SAJPND4_RS06265 SAJPND4_RS06360 SM00155 Phospholipase D. Active site motifs. SAJPND4_RS06365 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS06380 SM00421 helix_turn_helix, Lux Regulon SAJPND4_RS06380 SM00448 cheY-homologous receiver domain SAJPND4_RS06390 SM00318 Staphylococcal nuclease homologues SAJPND4_RS06445 SM01060 SAJPND4_RS06445 SAJPND4_RS06460 SM01240 SAJPND4_RS06460 SAJPND4_RS06490 SM00861 Transketolase, pyrimidine binding domain SAJPND4_RS06555 SM01207 SAJPND4_RS06555 SAJPND4_RS06560 SM00387 Histidine kinase-like ATPases SAJPND4_RS06560 SM00433 TopoisomeraseII SAJPND4_RS06565 SM00434 DNA Topoisomerase IV SAJPND4_RS06580 SM01061 CAT RNA binding domain SAJPND4_RS06685 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS06690 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS06730 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS06755 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS06765 SM00859 Semialdehyde dehydrogenase, NAD binding domain SAJPND4_RS06770 SM01130 SAJPND4_RS06770 SAJPND4_RS06790 SM01005 Alanine racemase, C-terminal domain SAJPND4_RS06810 SM00357 Cold shock protein domain SAJPND4_RS06845 SM00327 von Willebrand factor (vWF) type A domain SAJPND4_RS06870 SM00861 Transketolase, pyrimidine binding domain SAJPND4_RS06875 SM00387 Histidine kinase-like ATPases SAJPND4_RS06875 SM00388 His Kinase A (phosphoacceptor) domain SAJPND4_RS06880 SM00448 cheY-homologous receiver domain SAJPND4_RS06880 SM00862 Transcriptional regulatory protein, C terminal SAJPND4_RS06895 SM00014 Acid phosphatase homologues SAJPND4_RS06910 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SAJPND4_RS06910 SM00245 tail specific protease SAJPND4_RS06960 SM00567 E-Z type HEAT repeats SAJPND4_RS06960 SM00932 Scaffold protein Nfu/NifU N terminal SAJPND4_RS06965 SM00932 Scaffold protein Nfu/NifU N terminal SAJPND4_RS07015 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SAJPND4_RS07015 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SAJPND4_RS07020 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SAJPND4_RS07020 SM00475 5'-3' exonuclease SAJPND4_RS07045 SM00981 SAJPND4_RS07045 SAJPND4_RS07095 SM00478 endonuclease III SAJPND4_RS07095 SM00525 SAJPND4_RS07095 SAJPND4_RS07110 SM00479 SAJPND4_RS07110 SAJPND4_RS07110 SM00491 SAJPND4_RS07110 SAJPND4_RS07145 SM00914 SAJPND4_RS07145 SAJPND4_RS07150 SM00028 Tetratricopeptide repeats SAJPND4_RS07175 SM00562 SAJPND4_RS07175 SAJPND4_RS07200 SM00411 bacterial (prokaryotic) histone like domain SAJPND4_RS07215 SM00316 Ribosomal protein S1-like RNA-binding domain SAJPND4_RS07240 SM00870 SAJPND4_RS07240 SAJPND4_RS07255 SM00257 Lysin motif SAJPND4_RS07260 SM00487 DEAD-like helicases superfamily SAJPND4_RS07260 SM00490 helicase superfamily c-terminal domain SAJPND4_RS07305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SAJPND4_RS07305 SM00387 Histidine kinase-like ATPases SAJPND4_RS07305 SM00388 His Kinase A (phosphoacceptor) domain SAJPND4_RS07310 SM00448 cheY-homologous receiver domain SAJPND4_RS07310 SM00862 Transcriptional regulatory protein, C terminal SAJPND4_RS07315 SM00363 S4 RNA-binding domain SAJPND4_RS07380 SM00342 helix_turn_helix, arabinose operon control protein SAJPND4_RS07380 SM00871 Bacterial transcription activator, effector binding domain SAJPND4_RS07385 SM00642 Alpha-amylase domain SAJPND4_RS07390 SM00354 helix_turn _helix lactose operon repressor SAJPND4_RS07405 SM01350 SAJPND4_RS07405 SAJPND4_RS07435 SM00861 Transketolase, pyrimidine binding domain SAJPND4_RS07485 SM00878 Biotin carboxylase C-terminal domain SAJPND4_RS07495 SM00841 Elongation factor P, C-terminal SAJPND4_RS07495 SM01185 SAJPND4_RS07495 SAJPND4_RS07520 SM00450 Rhodanese Homology Domain SAJPND4_RS07580 SM00849 Metallo-beta-lactamase superfamily SAJPND4_RS07635 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS07640 SM00518 AP endonuclease family 2 SAJPND4_RS07645 SM00487 DEAD-like helicases superfamily SAJPND4_RS07645 SM00490 helicase superfamily c-terminal domain SAJPND4_RS07665 SM00400 zinc finger SAJPND4_RS07665 SM00493 SAJPND4_RS07665 SAJPND4_RS07675 SM00116 Domain in cystathionine beta-synthase and other proteins. SAJPND4_RS07735 SM00729 Elongator protein 3, MiaB family, Radical SAM SAJPND4_RS07750 SM00271 DnaJ molecular chaperone homology domain SAJPND4_RS07770 SM00729 Elongator protein 3, MiaB family, Radical SAM SAJPND4_RS07780 SM00838 Elongation factor G C-terminus SAJPND4_RS07795 SM00849 Metallo-beta-lactamase superfamily SAJPND4_RS07805 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAJPND4_RS07820 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAJPND4_RS07830 SM01103 SAJPND4_RS07830 SAJPND4_RS07885 SM00878 Biotin carboxylase C-terminal domain SAJPND4_RS07895 SM00797 Allophanate hydrolase subunit 2 SAJPND4_RS07900 SM00796 Allophanate hydrolase subunit 1 SAJPND4_RS07935 SM00732 Likely ribonuclease with RNase H fold. SAJPND4_RS07945 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SAJPND4_RS07950 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS07955 SM00028 Tetratricopeptide repeats SAJPND4_RS07995 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS08025 SM00287 Bacterial SH3 domain homologues SAJPND4_RS08025 SM00646 SAJPND4_RS08025 SAJPND4_RS08035 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAJPND4_RS08035 SM00954 Region found in RelA / SpoT proteins SAJPND4_RS08055 SM01323 SAJPND4_RS08055 SAJPND4_RS08070 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS08075 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SAJPND4_RS08175 SM01004 Delta-aminolevulinic acid dehydratase SAJPND4_RS08205 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS08205 SM00994 ClpX C4-type zinc finger SAJPND4_RS08205 SM01086 C-terminal, D2-small domain, of ClpB protein SAJPND4_RS08255 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SAJPND4_RS08280 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SAJPND4_RS08290 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SAJPND4_RS08290 SM01232 SAJPND4_RS08290 SAJPND4_RS08295 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SAJPND4_RS08295 SM00474 3'-5' exonuclease SAJPND4_RS08295 SM00475 5'-3' exonuclease SAJPND4_RS08295 SM00482 DNA polymerase A domain SAJPND4_RS08305 SM00387 Histidine kinase-like ATPases SAJPND4_RS08305 SM00388 His Kinase A (phosphoacceptor) domain SAJPND4_RS08310 SM00448 cheY-homologous receiver domain SAJPND4_RS08310 SM00862 Transcriptional regulatory protein, C terminal SAJPND4_RS08320 SM01329 SAJPND4_RS08320 SAJPND4_RS08355 SM00919 Malic enzyme, NAD binding domain SAJPND4_RS08355 SM01274 SAJPND4_RS08355 SAJPND4_RS08360 SM00481 DNA polymerase alpha chain like domain SAJPND4_RS08370 SM00116 Domain in cystathionine beta-synthase and other proteins. SAJPND4_RS08380 SM00849 Metallo-beta-lactamase superfamily SAJPND4_RS08395 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SAJPND4_RS08395 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SAJPND4_RS08425 SM00981 SAJPND4_RS08425 SAJPND4_RS08445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SAJPND4_RS08450 SM00363 S4 RNA-binding domain SAJPND4_RS08450 SM01390 SAJPND4_RS08450 SAJPND4_RS08495 SM00563 Phosphate acyltransferases SAJPND4_RS08500 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SAJPND4_RS08505 SM00363 S4 RNA-binding domain SAJPND4_RS08520 SM00725 NEAr Transporter domain SAJPND4_RS08550 SM00354 helix_turn _helix lactose operon repressor SAJPND4_RS08560 SM00830 Chorismate mutase type II SAJPND4_RS08585 SM00843 SAJPND4_RS08585 SAJPND4_RS08615 SM00849 Metallo-beta-lactamase superfamily SAJPND4_RS08645 SM00363 S4 RNA-binding domain SAJPND4_RS08665 SM00450 Rhodanese Homology Domain SAJPND4_RS08680 SM00729 Elongator protein 3, MiaB family, Radical SAM SAJPND4_RS08690 SM00347 helix_turn_helix multiple antibiotic resistance protein SAJPND4_RS08745 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SAJPND4_RS08755 SM00047 Lysozyme subfamily 2 SAJPND4_RS08855 SM01234 SAJPND4_RS08855 SAJPND4_RS08875 SM00894 Excalibur calcium-binding domain SAJPND4_RS09165 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS09190 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAJPND4_RS09220 SM00530 Helix-turn-helix XRE-family like proteins SAJPND4_RS09225 SM00421 helix_turn_helix, Lux Regulon SAJPND4_RS09225 SM00448 cheY-homologous receiver domain SAJPND4_RS09280 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS09285 SM00062 Bacterial periplasmic substrate-binding proteins SAJPND4_RS09475 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS09485 SM00478 endonuclease III SAJPND4_RS09555 SM00226 Low molecular weight phosphatase family SAJPND4_RS09570 SM00421 helix_turn_helix, Lux Regulon SAJPND4_RS09570 SM00448 cheY-homologous receiver domain SAJPND4_RS09575 SM00387 Histidine kinase-like ATPases SAJPND4_RS09635 SM00479 SAJPND4_RS09635 SAJPND4_RS09655 SM00046 Diacylglycerol kinase catalytic domain (presumed) SAJPND4_RS09665 SM00845 GatB domain SAJPND4_RS09710 SM00998 Adenylosuccinate lyase C-terminus SAJPND4_RS09765 SM00710 Parallel beta-helix repeats SAJPND4_RS09775 SM01131 SAJPND4_RS09775 SAJPND4_RS09880 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS09890 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS09895 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAJPND4_RS09955 SM00287 Bacterial SH3 domain homologues SAJPND4_RS10070 SM00507 HNH nucleases SAJPND4_RS10205 SM00530 Helix-turn-helix XRE-family like proteins SAJPND4_RS10215 SM00530 Helix-turn-helix XRE-family like proteins SAJPND4_RS10220 SM00479 SAJPND4_RS10220 SAJPND4_RS10285 SM00883 Chaperonin 10 Kd subunit SAJPND4_RS10315 SM00793 Accessory gene regulator B SAJPND4_RS10320 SM00794 Staphylococcal AgrD protein SAJPND4_RS10330 SM00448 cheY-homologous receiver domain SAJPND4_RS10330 SM00850 LytTr DNA-binding domain SAJPND4_RS10345 SM00640 Glycosyl hydrolases family 32 SAJPND4_RS10350 SM00354 helix_turn _helix lactose operon repressor SAJPND4_RS10370 SM00881 CoA binding domain SAJPND4_RS10375 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS10385 SM00534 ATPase domain of DNA mismatch repair MUTS family SAJPND4_RS10435 SM00917 LeuA allosteric (dimerisation) domain SAJPND4_RS10440 SM01329 SAJPND4_RS10440 SAJPND4_RS10490 SM00731 SprT homologues. SAJPND4_RS10495 SM00316 Ribosomal protein S1-like RNA-binding domain SAJPND4_RS10495 SM00732 Likely ribonuclease with RNase H fold. SAJPND4_RS10515 SM00331 Sigma factor PP2C-like phosphatases SAJPND4_RS10515 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SAJPND4_RS10535 SM01005 Alanine racemase, C-terminal domain SAJPND4_RS10580 SM00387 Histidine kinase-like ATPases SAJPND4_RS10580 SM00388 His Kinase A (phosphoacceptor) domain SAJPND4_RS10585 SM00448 cheY-homologous receiver domain SAJPND4_RS10585 SM00862 Transcriptional regulatory protein, C terminal SAJPND4_RS10590 SM00487 DEAD-like helicases superfamily SAJPND4_RS10590 SM00490 helicase superfamily c-terminal domain SAJPND4_RS10635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SAJPND4_RS10705 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS10765 SM00226 Low molecular weight phosphatase family SAJPND4_RS10780 SM00937 SAJPND4_RS10780 SAJPND4_RS10795 SM00357 Cold shock protein domain SAJPND4_RS10795 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS10795 SM00959 Rho termination factor, N-terminal domain SAJPND4_RS10875 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SAJPND4_RS10885 SM01133 SAJPND4_RS10885 SAJPND4_RS10925 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SAJPND4_RS10950 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS11165 SM00829 Enoylreductase SAJPND4_RS11170 SM00829 Enoylreductase SAJPND4_RS11195 SM01133 SAJPND4_RS11195 SAJPND4_RS11215 SM00420 helix_turn_helix, Deoxyribose operon repressor SAJPND4_RS11215 SM01134 SAJPND4_RS11215 SAJPND4_RS11245 SM00422 helix_turn_helix, mercury resistance SAJPND4_RS11310 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS11315 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS11325 SM00662 RNA polymerases D SAJPND4_RS11345 SM00316 Ribosomal protein S1-like RNA-binding domain SAJPND4_RS11400 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SAJPND4_RS11405 SM01374 SAJPND4_RS11405 SAJPND4_RS11425 SM00322 K homology RNA-binding domain SAJPND4_RS11440 SM01382 SAJPND4_RS11440 SAJPND4_RS11440 SM01383 SAJPND4_RS11440 SAJPND4_RS11460 SM01403 SAJPND4_RS11460 SAJPND4_RS11475 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SAJPND4_RS11475 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SAJPND4_RS11475 SM00493 SAJPND4_RS11475 SAJPND4_RS11535 SM00347 helix_turn_helix multiple antibiotic resistance protein SAJPND4_RS11560 SM00729 Elongator protein 3, MiaB family, Radical SAM SAJPND4_RS11585 SM00852 Probable molybdopterin binding domain SAJPND4_RS11595 SM00852 Probable molybdopterin binding domain SAJPND4_RS11605 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS11670 SM00988 UreE urease accessory protein, N-terminal domain SAJPND4_RS11710 SM00342 helix_turn_helix, arabinose operon control protein SAJPND4_RS11760 SM00047 Lysozyme subfamily 2 SAJPND4_RS11775 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SAJPND4_RS11775 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SAJPND4_RS11790 SM00420 helix_turn_helix, Deoxyribose operon repressor SAJPND4_RS11945 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS12035 SM00347 helix_turn_helix multiple antibiotic resistance protein SAJPND4_RS12050 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS12060 SM00448 cheY-homologous receiver domain SAJPND4_RS12060 SM00862 Transcriptional regulatory protein, C terminal SAJPND4_RS12065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SAJPND4_RS12065 SM00387 Histidine kinase-like ATPases SAJPND4_RS12065 SM00388 His Kinase A (phosphoacceptor) domain SAJPND4_RS12070 SM00850 LytTr DNA-binding domain SAJPND4_RS12105 SM00829 Enoylreductase SAJPND4_RS12165 SM00342 helix_turn_helix, arabinose operon control protein SAJPND4_RS12190 SM00347 helix_turn_helix multiple antibiotic resistance protein SAJPND4_RS12205 SM00421 helix_turn_helix, Lux Regulon SAJPND4_RS12205 SM00448 cheY-homologous receiver domain SAJPND4_RS12210 SM00387 Histidine kinase-like ATPases SAJPND4_RS12235 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SAJPND4_RS12315 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS12325 SM00062 Bacterial periplasmic substrate-binding proteins SAJPND4_RS12325 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SAJPND4_RS12340 SM00855 Phosphoglycerate mutase family SAJPND4_RS12390 SM00729 Elongator protein 3, MiaB family, Radical SAM SAJPND4_RS12390 SM00876 Biotin and Thiamin Synthesis associated domain SAJPND4_RS12415 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS12420 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS12455 SM00871 Bacterial transcription activator, effector binding domain SAJPND4_RS12535 SM00116 Domain in cystathionine beta-synthase and other proteins. SAJPND4_RS12535 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS12575 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS12620 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS12625 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS12760 SM00487 DEAD-like helicases superfamily SAJPND4_RS12760 SM00490 helicase superfamily c-terminal domain SAJPND4_RS12795 SM01208 SAJPND4_RS12795 SAJPND4_RS12845 SM00345 helix_turn_helix gluconate operon transcriptional repressor SAJPND4_RS12845 SM00895 SAJPND4_RS12845 SAJPND4_RS12850 SM00422 helix_turn_helix, mercury resistance SAJPND4_RS12855 SM00954 Region found in RelA / SpoT proteins SAJPND4_RS12880 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS12915 SM00347 helix_turn_helix multiple antibiotic resistance protein SAJPND4_RS12945 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS13065 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS13065 SM01086 C-terminal, D2-small domain, of ClpB protein SAJPND4_RS13080 SM00899 SAJPND4_RS13080 SAJPND4_RS13105 SM01266 SAJPND4_RS13105 SAJPND4_RS13310 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SAJPND4_RS13495 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS13500 SM00387 Histidine kinase-like ATPases SAJPND4_RS13505 SM00448 cheY-homologous receiver domain SAJPND4_RS13505 SM00862 Transcriptional regulatory protein, C terminal SAJPND4_RS13520 SM00098 Alkaline phosphatase homologues SAJPND4_RS13525 SM00347 helix_turn_helix multiple antibiotic resistance protein SAJPND4_RS13610 SM00047 Lysozyme subfamily 2 SAJPND4_RS13635 SM00957 SecA DEAD-like domain SAJPND4_RS13635 SM00958 SecA preprotein cross-linking domain SAJPND4_RS13670 SM00903 Flavin reductase like domain SAJPND4_RS13690 SM00903 Flavin reductase like domain SAJPND4_RS13810 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS13825 SM00867 YceI-like domain SAJPND4_RS13835 SM00450 Rhodanese Homology Domain SAJPND4_RS13880 SM00382 ATPases associated with a variety of cellular activities SAJPND4_RS13895 SM00357 Cold shock protein domain SAJPND4_RS13900 SM00530 Helix-turn-helix XRE-family like proteins SAJPND4_RS13915 SM00470 ParB-like nuclease domain SAJPND4_RS13925 SM01228 SAJPND4_RS13925