ACO02_RS00040 SM00861 Transketolase, pyrimidine binding domain ACO02_RS00070 SM01240 ACO02_RS00070 ACO02_RS00085 SM01060 ACO02_RS00085 ACO02_RS00140 SM00318 Staphylococcal nuclease homologues ACO02_RS00150 SM00421 helix_turn_helix, Lux Regulon ACO02_RS00150 SM00448 cheY-homologous receiver domain ACO02_RS00165 SM00382 ATPases associated with a variety of cellular activities ACO02_RS00170 SM00155 Phospholipase D. Active site motifs. ACO02_RS00280 SM01230 ACO02_RS00280 ACO02_RS00285 SM00422 helix_turn_helix, mercury resistance ACO02_RS00340 SM00853 MutL C terminal dimerisation domain ACO02_RS00340 SM01340 ACO02_RS00340 ACO02_RS00345 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ACO02_RS00345 SM00534 ATPase domain of DNA mismatch repair MUTS family ACO02_RS00360 SM00729 Elongator protein 3, MiaB family, Radical SAM ACO02_RS00390 SM00322 K homology RNA-binding domain ACO02_RS00390 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACO02_RS00395 SM00382 ATPases associated with a variety of cellular activities ACO02_RS00400 SM00852 Probable molybdopterin binding domain ACO02_RS00410 SM00530 Helix-turn-helix XRE-family like proteins ACO02_RS00435 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACO02_RS00435 SM00866 ACO02_RS00435 ACO02_RS00440 SM00382 ATPases associated with a variety of cellular activities ACO02_RS00440 SM00843 ACO02_RS00440 ACO02_RS00445 SM00849 Metallo-beta-lactamase superfamily ACO02_RS00455 SM00316 Ribosomal protein S1-like RNA-binding domain ACO02_RS00455 SM00322 K homology RNA-binding domain ACO02_RS00460 SM01387 ACO02_RS00460 ACO02_RS00465 SM00904 Riboflavin kinase ACO02_RS00495 SM00316 Ribosomal protein S1-like RNA-binding domain ACO02_RS00495 SM00322 K homology RNA-binding domain ACO02_RS00510 SM00479 ACO02_RS00510 ACO02_RS00510 SM00481 DNA polymerase alpha chain like domain ACO02_RS00570 SM00382 ATPases associated with a variety of cellular activities ACO02_RS00570 SM01086 C-terminal, D2-small domain, of ClpB protein ACO02_RS00590 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ACO02_RS00590 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ACO02_RS00590 SM00493 ACO02_RS00590 ACO02_RS00605 SM00257 Lysin motif ACO02_RS00610 SM00881 CoA binding domain ACO02_RS00655 SM00382 ATPases associated with a variety of cellular activities ACO02_RS00655 SM00962 SRP54-type protein, GTPase domain ACO02_RS00655 SM00963 SRP54-type protein, helical bundle domain ACO02_RS00665 SM00382 ATPases associated with a variety of cellular activities ACO02_RS00665 SM00962 SRP54-type protein, GTPase domain ACO02_RS00665 SM00963 SRP54-type protein, helical bundle domain ACO02_RS00670 SM00968 SMC proteins Flexible Hinge Domain ACO02_RS00675 SM00358 Double-stranded RNA binding motif ACO02_RS00675 SM00535 Ribonuclease III family ACO02_RS00690 SM00822 ACO02_RS00690 ACO02_RS00695 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ACO02_RS00710 SM00487 DEAD-like helicases superfamily ACO02_RS00710 SM00490 helicase superfamily c-terminal domain ACO02_RS00715 SM01120 ACO02_RS00715 ACO02_RS00715 SM01121 ACO02_RS00715 ACO02_RS00730 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain ACO02_RS00745 SM00220 Serine/Threonine protein kinases, catalytic domain ACO02_RS00745 SM00740 ACO02_RS00745 ACO02_RS00750 SM00331 Sigma factor PP2C-like phosphatases ACO02_RS00750 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACO02_RS00785 SM00487 DEAD-like helicases superfamily ACO02_RS00785 SM00490 helicase superfamily c-terminal domain ACO02_RS00795 SM01409 ACO02_RS00795 ACO02_RS00800 SM00072 Guanylate kinase homologues. ACO02_RS00825 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ACO02_RS00830 SM00851 MGS-like domain ACO02_RS00830 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ACO02_RS00830 SM01209 ACO02_RS00830 ACO02_RS00835 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ACO02_RS00860 SM00363 S4 RNA-binding domain ACO02_RS00895 SM00363 S4 RNA-binding domain ACO02_RS00920 SM00864 Tubulin/FtsZ family, GTPase domain ACO02_RS00920 SM00865 Tubulin/FtsZ family, C-terminal domain ACO02_RS00925 SM00842 Cell division protein FtsA ACO02_RS00945 SM00740 ACO02_RS00945 ACO02_RS01140 SM00465 GIY-YIG type nucleases (URI domain) ACO02_RS01155 SM00463 Small MutS-related domain ACO02_RS01155 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ACO02_RS01155 SM00534 ATPase domain of DNA mismatch repair MUTS family ACO02_RS01160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACO02_RS01160 SM00481 DNA polymerase alpha chain like domain ACO02_RS01160 SM00483 DNA polymerase X family ACO02_RS01185 SM00873 B3/4 domain ACO02_RS01185 SM00874 tRNA synthetase B5 domain ACO02_RS01185 SM00896 Ferredoxin-fold anticodon binding domain ACO02_RS01195 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACO02_RS01230 SM00725 NEAr Transporter domain ACO02_RS01235 SM00725 NEAr Transporter domain ACO02_RS01240 SM00725 NEAr Transporter domain ACO02_RS01320 SM00878 Biotin carboxylase C-terminal domain ACO02_RS01345 SM00838 Elongation factor G C-terminus ACO02_RS01395 SM00382 ATPases associated with a variety of cellular activities ACO02_RS01400 SM00530 Helix-turn-helix XRE-family like proteins ACO02_RS01420 SM00861 Transketolase, pyrimidine binding domain ACO02_RS01450 SM00849 Metallo-beta-lactamase superfamily ACO02_RS01520 SM00382 ATPases associated with a variety of cellular activities ACO02_RS01530 SM01209 ACO02_RS01530 ACO02_RS01530 SM01210 ACO02_RS01530 ACO02_RS01535 SM00798 AICARFT/IMPCHase bienzyme ACO02_RS01535 SM00851 MGS-like domain ACO02_RS01560 SM01211 ACO02_RS01560 ACO02_RS01580 SM01001 AIR carboxylase ACO02_RS01645 SM00047 Lysozyme subfamily 2 ACO02_RS01645 SM00644 ACO02_RS01645 ACO02_RS01655 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS01755 SM00382 ATPases associated with a variety of cellular activities ACO02_RS01800 SM00914 ACO02_RS01800 ACO02_RS01830 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACO02_RS01895 SM00116 Domain in cystathionine beta-synthase and other proteins. ACO02_RS01895 SM00924 MgtE intracellular N domain ACO02_RS01910 SM00954 Region found in RelA / SpoT proteins ACO02_RS01920 SM01118 ACO02_RS01920 ACO02_RS01975 SM00382 ATPases associated with a variety of cellular activities ACO02_RS01980 SM00382 ATPases associated with a variety of cellular activities ACO02_RS01995 SM00382 ATPases associated with a variety of cellular activities ACO02_RS02000 SM00382 ATPases associated with a variety of cellular activities ACO02_RS02020 SM00825 Beta-ketoacyl synthase ACO02_RS02065 SM00382 ATPases associated with a variety of cellular activities ACO02_RS02065 SM01086 C-terminal, D2-small domain, of ClpB protein ACO02_RS02150 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ACO02_RS02165 SM00316 Ribosomal protein S1-like RNA-binding domain ACO02_RS02175 SM01298 ACO02_RS02175 ACO02_RS02320 SM00729 Elongator protein 3, MiaB family, Radical SAM ACO02_RS02390 SM00382 ATPases associated with a variety of cellular activities ACO02_RS02415 SM00382 ATPases associated with a variety of cellular activities ACO02_RS02415 SM00930 ACO02_RS02415 ACO02_RS02425 SM00493 ACO02_RS02425 ACO02_RS02485 SM00855 Phosphoglycerate mutase family ACO02_RS02525 SM00357 Cold shock protein domain ACO02_RS02530 SM00318 Staphylococcal nuclease homologues ACO02_RS02600 SM00316 Ribosomal protein S1-like RNA-binding domain ACO02_RS02600 SM00357 Cold shock protein domain ACO02_RS02600 SM00955 ACO02_RS02600 ACO02_RS02620 SM01192 ACO02_RS02620 ACO02_RS02620 SM01193 ACO02_RS02620 ACO02_RS02640 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACO02_RS02695 SM00028 Tetratricopeptide repeats ACO02_RS02720 SM00487 DEAD-like helicases superfamily ACO02_RS02720 SM00490 helicase superfamily c-terminal domain ACO02_RS02735 SM00257 Lysin motif ACO02_RS02755 SM00957 SecA DEAD-like domain ACO02_RS02755 SM00958 SecA preprotein cross-linking domain ACO02_RS02770 SM00487 DEAD-like helicases superfamily ACO02_RS02770 SM00490 helicase superfamily c-terminal domain ACO02_RS02790 SM00267 diguanylate cyclase ACO02_RS02845 SM00382 ATPases associated with a variety of cellular activities ACO02_RS02920 SM00046 Diacylglycerol kinase catalytic domain (presumed) ACO02_RS02945 SM00382 ATPases associated with a variety of cellular activities ACO02_RS02950 SM00341 Helicase and RNase D C-terminal ACO02_RS02950 SM00487 DEAD-like helicases superfamily ACO02_RS02950 SM00490 helicase superfamily c-terminal domain ACO02_RS02950 SM00956 ACO02_RS02950 ACO02_RS02955 SM00382 ATPases associated with a variety of cellular activities ACO02_RS02965 SM00797 Allophanate hydrolase subunit 2 ACO02_RS02970 SM00796 Allophanate hydrolase subunit 1 ACO02_RS03025 SM00448 cheY-homologous receiver domain ACO02_RS03025 SM00862 Transcriptional regulatory protein, C terminal ACO02_RS03030 SM00387 Histidine kinase-like ATPases ACO02_RS03030 SM00388 His Kinase A (phosphoacceptor) domain ACO02_RS03045 SM01091 Transporter associated domain ACO02_RS03065 SM00420 helix_turn_helix, Deoxyribose operon repressor ACO02_RS03065 SM01134 ACO02_RS03065 ACO02_RS03120 SM00833 Cobalamin synthesis protein cobW C-terminal domain ACO02_RS03125 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS03130 SM00382 ATPases associated with a variety of cellular activities ACO02_RS03135 SM00382 ATPases associated with a variety of cellular activities ACO02_RS03230 SM00342 helix_turn_helix, arabinose operon control protein ACO02_RS03240 SM00257 Lysin motif ACO02_RS03260 SM00382 ATPases associated with a variety of cellular activities ACO02_RS03265 SM00387 Histidine kinase-like ATPases ACO02_RS03270 SM00448 cheY-homologous receiver domain ACO02_RS03270 SM00862 Transcriptional regulatory protein, C terminal ACO02_RS03315 SM01120 ACO02_RS03315 ACO02_RS03335 SM00382 ATPases associated with a variety of cellular activities ACO02_RS03355 SM00382 ATPases associated with a variety of cellular activities ACO02_RS03385 SM00382 ATPases associated with a variety of cellular activities ACO02_RS03400 SM00529 Helix-turn-helix diphteria tox regulatory element ACO02_RS03400 SM00899 ACO02_RS03400 ACO02_RS03405 SM00382 ATPases associated with a variety of cellular activities ACO02_RS03600 SM00478 endonuclease III ACO02_RS03610 SM00836 DALR anticodon binding domain ACO02_RS03610 SM01016 Arginyl tRNA synthetase N terminal dom ACO02_RS03625 SM00829 Enoylreductase ACO02_RS03635 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACO02_RS03810 SM00986 Uracil DNA glycosylase superfamily ACO02_RS03810 SM00987 UreE urease accessory protein, C-terminal domain ACO02_RS03865 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ACO02_RS03990 SM00838 Elongation factor G C-terminus ACO02_RS03990 SM00889 Elongation factor G, domain IV ACO02_RS04010 SM00663 RNA polymerase I subunit A N-terminus ACO02_RS04045 SM00649 Ribosomal protein L11/L12 ACO02_RS04050 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ACO02_RS04050 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ACO02_RS04075 SM00967 RNA 2'-O ribose methyltransferase substrate binding ACO02_RS04080 SM00535 Ribonuclease III family ACO02_RS04085 SM00840 ACO02_RS04085 ACO02_RS04105 SM00670 Large family of predicted nucleotide-binding domains ACO02_RS04110 SM00382 ATPases associated with a variety of cellular activities ACO02_RS04115 SM00382 ATPases associated with a variety of cellular activities ACO02_RS04115 SM01086 C-terminal, D2-small domain, of ClpB protein ACO02_RS04150 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACO02_RS04250 SM00905 Dihydroneopterin aldolase ACO02_RS04270 SM00382 ATPases associated with a variety of cellular activities ACO02_RS04280 SM00977 TilS substrate C-terminal domain ACO02_RS04285 SM00316 Ribosomal protein S1-like RNA-binding domain ACO02_RS04295 SM00363 S4 RNA-binding domain ACO02_RS04310 SM00487 DEAD-like helicases superfamily ACO02_RS04310 SM00490 helicase superfamily c-terminal domain ACO02_RS04310 SM00982 ACO02_RS04310 ACO02_RS04310 SM01058 CarD-like/TRCF domain ACO02_RS04330 SM01400 ACO02_RS04330 ACO02_RS04370 SM00650 Ribosomal RNA adenine dimethylases ACO02_RS04375 SM00493 ACO02_RS04375 ACO02_RS04395 SM00465 GIY-YIG type nucleases (URI domain) ACO02_RS04460 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACO02_RS04460 SM00493 ACO02_RS04460 ACO02_RS04470 SM00382 ATPases associated with a variety of cellular activities ACO02_RS04490 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACO02_RS04490 SM00866 ACO02_RS04490 ACO02_RS04495 SM00642 Alpha-amylase domain ACO02_RS04550 SM00257 Lysin motif ACO02_RS04565 SM00382 ATPases associated with a variety of cellular activities ACO02_RS04565 SM00930 ACO02_RS04565 ACO02_RS04595 SM00014 Acid phosphatase homologues ACO02_RS04640 SM00833 Cobalamin synthesis protein cobW C-terminal domain ACO02_RS04840 SM00116 Domain in cystathionine beta-synthase and other proteins. ACO02_RS04840 SM01240 ACO02_RS04840 ACO02_RS04915 SM00855 Phosphoglycerate mutase family ACO02_RS05005 SM00470 ParB-like nuclease domain ACO02_RS05055 SM00382 ATPases associated with a variety of cellular activities ACO02_RS05065 SM00530 Helix-turn-helix XRE-family like proteins ACO02_RS05145 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS05190 SM00506 Appr-1"-p processing enzyme ACO02_RS05245 SM01130 ACO02_RS05245 ACO02_RS05485 SM00382 ATPases associated with a variety of cellular activities ACO02_RS05520 SM00354 helix_turn _helix lactose operon repressor ACO02_RS05570 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACO02_RS05570 SM00866 ACO02_RS05570 ACO02_RS05585 SM00448 cheY-homologous receiver domain ACO02_RS05585 SM00850 LytTr DNA-binding domain ACO02_RS05590 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACO02_RS05590 SM00387 Histidine kinase-like ATPases ACO02_RS05640 SM00829 Enoylreductase ACO02_RS05650 SM00829 Enoylreductase ACO02_RS05735 SM00882 Coenzyme A transferase ACO02_RS05805 SM00342 helix_turn_helix, arabinose operon control protein ACO02_RS05805 SM00448 cheY-homologous receiver domain ACO02_RS05850 SM00382 ATPases associated with a variety of cellular activities ACO02_RS05890 SM00382 ATPases associated with a variety of cellular activities ACO02_RS05910 SM00487 DEAD-like helicases superfamily ACO02_RS05970 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACO02_RS06030 SM00382 ATPases associated with a variety of cellular activities ACO02_RS06070 SM00984 UDP binding domain ACO02_RS06185 SM00062 Bacterial periplasmic substrate-binding proteins ACO02_RS06190 SM00382 ATPases associated with a variety of cellular activities ACO02_RS06210 SM01133 ACO02_RS06210 ACO02_RS06230 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACO02_RS06275 SM00822 ACO02_RS06275 ACO02_RS06295 SM00470 ParB-like nuclease domain ACO02_RS06355 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS06365 SM00257 Lysin motif ACO02_RS06380 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACO02_RS06410 SM00342 helix_turn_helix, arabinose operon control protein ACO02_RS06435 SM00148 Phospholipase C, catalytic domain (part); domain X ACO02_RS06515 SM00450 Rhodanese Homology Domain ACO02_RS06515 SM00849 Metallo-beta-lactamase superfamily ACO02_RS06520 SM00450 Rhodanese Homology Domain ACO02_RS06570 SM00382 ATPases associated with a variety of cellular activities ACO02_RS06575 SM00382 ATPases associated with a variety of cellular activities ACO02_RS06690 SM00829 Enoylreductase ACO02_RS06770 SM00857 Resolvase, N terminal domain ACO02_RS06775 SM00857 Resolvase, N terminal domain ACO02_RS06860 SM00849 Metallo-beta-lactamase superfamily ACO02_RS06875 SM00091 PAS domain ACO02_RS06875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACO02_RS06875 SM00387 Histidine kinase-like ATPases ACO02_RS06875 SM00388 His Kinase A (phosphoacceptor) domain ACO02_RS06880 SM00448 cheY-homologous receiver domain ACO02_RS06880 SM00862 Transcriptional regulatory protein, C terminal ACO02_RS06895 SM00788 Adenylosuccinate synthetase ACO02_RS06915 SM00267 diguanylate cyclase ACO02_RS06960 SM00434 DNA Topoisomerase IV ACO02_RS06965 SM00387 Histidine kinase-like ATPases ACO02_RS06965 SM00433 TopoisomeraseII ACO02_RS06980 SM00480 DNA polymerase III beta subunit ACO02_RS06985 SM00382 ATPases associated with a variety of cellular activities ACO02_RS06985 SM00760 Bacterial dnaA protein helix-turn-helix domain ACO02_RS07005 SM01228 ACO02_RS07005 ACO02_RS07015 SM00470 ParB-like nuclease domain ACO02_RS07035 SM00530 Helix-turn-helix XRE-family like proteins ACO02_RS07040 SM00357 Cold shock protein domain ACO02_RS07075 SM00382 ATPases associated with a variety of cellular activities ACO02_RS07130 SM00450 Rhodanese Homology Domain ACO02_RS07140 SM00867 YceI-like domain ACO02_RS07155 SM00382 ATPases associated with a variety of cellular activities ACO02_RS07280 SM00903 Flavin reductase like domain ACO02_RS07300 SM00903 Flavin reductase like domain ACO02_RS07330 SM00957 SecA DEAD-like domain ACO02_RS07330 SM00958 SecA preprotein cross-linking domain ACO02_RS07355 SM00047 Lysozyme subfamily 2 ACO02_RS07440 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS07450 SM00098 Alkaline phosphatase homologues ACO02_RS07460 SM00448 cheY-homologous receiver domain ACO02_RS07460 SM00862 Transcriptional regulatory protein, C terminal ACO02_RS07465 SM00387 Histidine kinase-like ATPases ACO02_RS07470 SM00382 ATPases associated with a variety of cellular activities ACO02_RS07655 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ACO02_RS07860 SM01266 ACO02_RS07860 ACO02_RS07885 SM00899 ACO02_RS07885 ACO02_RS07900 SM00382 ATPases associated with a variety of cellular activities ACO02_RS07900 SM01086 C-terminal, D2-small domain, of ClpB protein ACO02_RS08035 SM00382 ATPases associated with a variety of cellular activities ACO02_RS08065 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS08095 SM00382 ATPases associated with a variety of cellular activities ACO02_RS08110 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS08145 SM00954 Region found in RelA / SpoT proteins ACO02_RS08150 SM00422 helix_turn_helix, mercury resistance ACO02_RS08155 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACO02_RS08155 SM00895 ACO02_RS08155 ACO02_RS08245 SM00487 DEAD-like helicases superfamily ACO02_RS08245 SM00490 helicase superfamily c-terminal domain ACO02_RS08380 SM00382 ATPases associated with a variety of cellular activities ACO02_RS08385 SM00382 ATPases associated with a variety of cellular activities ACO02_RS08430 SM00382 ATPases associated with a variety of cellular activities ACO02_RS08475 SM00116 Domain in cystathionine beta-synthase and other proteins. ACO02_RS08475 SM00382 ATPases associated with a variety of cellular activities ACO02_RS08555 SM00871 Bacterial transcription activator, effector binding domain ACO02_RS08590 SM00382 ATPases associated with a variety of cellular activities ACO02_RS08595 SM00382 ATPases associated with a variety of cellular activities ACO02_RS08620 SM00729 Elongator protein 3, MiaB family, Radical SAM ACO02_RS08620 SM00876 Biotin and Thiamin Synthesis associated domain ACO02_RS08680 SM00855 Phosphoglycerate mutase family ACO02_RS08700 SM00062 Bacterial periplasmic substrate-binding proteins ACO02_RS08700 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ACO02_RS08710 SM00382 ATPases associated with a variety of cellular activities ACO02_RS08795 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACO02_RS08820 SM00387 Histidine kinase-like ATPases ACO02_RS08825 SM00421 helix_turn_helix, Lux Regulon ACO02_RS08825 SM00448 cheY-homologous receiver domain ACO02_RS08830 SM00422 helix_turn_helix, mercury resistance ACO02_RS08850 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS08875 SM00342 helix_turn_helix, arabinose operon control protein ACO02_RS08930 SM00829 Enoylreductase ACO02_RS08965 SM00850 LytTr DNA-binding domain ACO02_RS08970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACO02_RS08970 SM00387 Histidine kinase-like ATPases ACO02_RS08970 SM00388 His Kinase A (phosphoacceptor) domain ACO02_RS08975 SM00448 cheY-homologous receiver domain ACO02_RS08975 SM00862 Transcriptional regulatory protein, C terminal ACO02_RS08985 SM00382 ATPases associated with a variety of cellular activities ACO02_RS09000 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS09090 SM00382 ATPases associated with a variety of cellular activities ACO02_RS09245 SM00420 helix_turn_helix, Deoxyribose operon repressor ACO02_RS09260 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ACO02_RS09260 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ACO02_RS09275 SM00047 Lysozyme subfamily 2 ACO02_RS09325 SM00342 helix_turn_helix, arabinose operon control protein ACO02_RS09365 SM00988 UreE urease accessory protein, N-terminal domain ACO02_RS09430 SM00382 ATPases associated with a variety of cellular activities ACO02_RS09440 SM00852 Probable molybdopterin binding domain ACO02_RS09450 SM00852 Probable molybdopterin binding domain ACO02_RS09475 SM00729 Elongator protein 3, MiaB family, Radical SAM ACO02_RS09510 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS09570 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ACO02_RS09570 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ACO02_RS09570 SM00493 ACO02_RS09570 ACO02_RS09585 SM01403 ACO02_RS09585 ACO02_RS09605 SM01382 ACO02_RS09605 ACO02_RS09605 SM01383 ACO02_RS09605 ACO02_RS09620 SM00322 K homology RNA-binding domain ACO02_RS09640 SM01374 ACO02_RS09640 ACO02_RS09645 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ACO02_RS09700 SM00316 Ribosomal protein S1-like RNA-binding domain ACO02_RS09720 SM00662 RNA polymerases D ACO02_RS09730 SM00382 ATPases associated with a variety of cellular activities ACO02_RS09735 SM00382 ATPases associated with a variety of cellular activities ACO02_RS09775 SM00382 ATPases associated with a variety of cellular activities ACO02_RS09830 SM00422 helix_turn_helix, mercury resistance ACO02_RS09860 SM00420 helix_turn_helix, Deoxyribose operon repressor ACO02_RS09860 SM01134 ACO02_RS09860 ACO02_RS09880 SM01133 ACO02_RS09880 ACO02_RS09905 SM00829 Enoylreductase ACO02_RS09910 SM00829 Enoylreductase ACO02_RS10140 SM00382 ATPases associated with a variety of cellular activities ACO02_RS10180 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACO02_RS10220 SM01133 ACO02_RS10220 ACO02_RS10230 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain ACO02_RS10305 SM00357 Cold shock protein domain ACO02_RS10305 SM00382 ATPases associated with a variety of cellular activities ACO02_RS10305 SM00959 Rho termination factor, N-terminal domain ACO02_RS10325 SM00937 ACO02_RS10325 ACO02_RS10340 SM00226 Low molecular weight phosphatase family ACO02_RS10400 SM00382 ATPases associated with a variety of cellular activities ACO02_RS10485 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACO02_RS10490 SM00155 Phospholipase D. Active site motifs. ACO02_RS10525 SM00487 DEAD-like helicases superfamily ACO02_RS10525 SM00490 helicase superfamily c-terminal domain ACO02_RS10530 SM00448 cheY-homologous receiver domain ACO02_RS10530 SM00862 Transcriptional regulatory protein, C terminal ACO02_RS10535 SM00387 Histidine kinase-like ATPases ACO02_RS10535 SM00388 His Kinase A (phosphoacceptor) domain ACO02_RS10580 SM01005 Alanine racemase, C-terminal domain ACO02_RS10600 SM00331 Sigma factor PP2C-like phosphatases ACO02_RS10600 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ACO02_RS10620 SM00316 Ribosomal protein S1-like RNA-binding domain ACO02_RS10620 SM00732 Likely ribonuclease with RNase H fold. ACO02_RS10625 SM00731 SprT homologues. ACO02_RS10675 SM01329 ACO02_RS10675 ACO02_RS10680 SM00917 LeuA allosteric (dimerisation) domain ACO02_RS10730 SM00534 ATPase domain of DNA mismatch repair MUTS family ACO02_RS10740 SM00382 ATPases associated with a variety of cellular activities ACO02_RS10745 SM00881 CoA binding domain ACO02_RS10765 SM00354 helix_turn _helix lactose operon repressor ACO02_RS10770 SM00640 Glycosyl hydrolases family 32 ACO02_RS10785 SM00448 cheY-homologous receiver domain ACO02_RS10785 SM00850 LytTr DNA-binding domain ACO02_RS10795 SM00794 Staphylococcal AgrD protein ACO02_RS10800 SM00793 Accessory gene regulator B ACO02_RS10830 SM00883 Chaperonin 10 Kd subunit ACO02_RS10925 SM00479 ACO02_RS10925 ACO02_RS10930 SM00530 Helix-turn-helix XRE-family like proteins ACO02_RS10940 SM00530 Helix-turn-helix XRE-family like proteins ACO02_RS11085 SM00507 HNH nucleases ACO02_RS11145 SM00635 Bacterial Ig-like domain 2 ACO02_RS11215 SM00287 Bacterial SH3 domain homologues ACO02_RS11275 SM00345 helix_turn_helix gluconate operon transcriptional repressor ACO02_RS11280 SM00382 ATPases associated with a variety of cellular activities ACO02_RS11290 SM00382 ATPases associated with a variety of cellular activities ACO02_RS11355 SM01131 ACO02_RS11355 ACO02_RS11365 SM00710 Parallel beta-helix repeats ACO02_RS11425 SM00998 Adenylosuccinate lyase C-terminus ACO02_RS11445 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACO02_RS11445 SM00292 breast cancer carboxy-terminal domain ACO02_RS11445 SM00532 Ligase N family ACO02_RS11470 SM00845 GatB domain ACO02_RS11485 SM00046 Diacylglycerol kinase catalytic domain (presumed) ACO02_RS11505 SM00479 ACO02_RS11505 ACO02_RS11575 SM00387 Histidine kinase-like ATPases ACO02_RS11580 SM00421 helix_turn_helix, Lux Regulon ACO02_RS11580 SM00448 cheY-homologous receiver domain ACO02_RS11595 SM00226 Low molecular weight phosphatase family ACO02_RS11665 SM00478 endonuclease III ACO02_RS11675 SM00382 ATPases associated with a variety of cellular activities ACO02_RS11880 SM00062 Bacterial periplasmic substrate-binding proteins ACO02_RS11885 SM00382 ATPases associated with a variety of cellular activities ACO02_RS11940 SM00421 helix_turn_helix, Lux Regulon ACO02_RS11940 SM00448 cheY-homologous receiver domain ACO02_RS11945 SM00530 Helix-turn-helix XRE-family like proteins ACO02_RS11980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACO02_RS12010 SM00382 ATPases associated with a variety of cellular activities ACO02_RS12145 SM01260 ACO02_RS12145 ACO02_RS12160 SM00382 ATPases associated with a variety of cellular activities ACO02_RS12310 SM00894 Excalibur calcium-binding domain ACO02_RS12330 SM01234 ACO02_RS12330 ACO02_RS12420 SM00047 Lysozyme subfamily 2 ACO02_RS12425 SM00226 Low molecular weight phosphatase family ACO02_RS12435 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACO02_RS12490 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS12500 SM00729 Elongator protein 3, MiaB family, Radical SAM ACO02_RS12515 SM00450 Rhodanese Homology Domain ACO02_RS12535 SM00363 S4 RNA-binding domain ACO02_RS12570 SM00849 Metallo-beta-lactamase superfamily ACO02_RS12600 SM00843 ACO02_RS12600 ACO02_RS12625 SM00830 Chorismate mutase type II ACO02_RS12635 SM00354 helix_turn _helix lactose operon repressor ACO02_RS12660 SM00725 NEAr Transporter domain ACO02_RS12675 SM00363 S4 RNA-binding domain ACO02_RS12680 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACO02_RS12685 SM00563 Phosphate acyltransferases ACO02_RS12730 SM00363 S4 RNA-binding domain ACO02_RS12730 SM01390 ACO02_RS12730 ACO02_RS12740 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ACO02_RS12760 SM00981 ACO02_RS12760 ACO02_RS12790 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ACO02_RS12790 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ACO02_RS12805 SM00849 Metallo-beta-lactamase superfamily ACO02_RS12815 SM00116 Domain in cystathionine beta-synthase and other proteins. ACO02_RS12830 SM00481 DNA polymerase alpha chain like domain ACO02_RS12835 SM00919 Malic enzyme, NAD binding domain ACO02_RS12835 SM01274 ACO02_RS12835 ACO02_RS12875 SM01329 ACO02_RS12875 ACO02_RS12885 SM00448 cheY-homologous receiver domain ACO02_RS12885 SM00862 Transcriptional regulatory protein, C terminal ACO02_RS12890 SM00387 Histidine kinase-like ATPases ACO02_RS12890 SM00388 His Kinase A (phosphoacceptor) domain ACO02_RS12900 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACO02_RS12900 SM00474 3'-5' exonuclease ACO02_RS12900 SM00475 5'-3' exonuclease ACO02_RS12900 SM00482 DNA polymerase A domain ACO02_RS12905 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ACO02_RS12905 SM01232 ACO02_RS12905 ACO02_RS12915 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ACO02_RS12940 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACO02_RS12990 SM00382 ATPases associated with a variety of cellular activities ACO02_RS12990 SM00994 ClpX C4-type zinc finger ACO02_RS12990 SM01086 C-terminal, D2-small domain, of ClpB protein ACO02_RS13020 SM01004 Delta-aminolevulinic acid dehydratase ACO02_RS13125 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACO02_RS13130 SM00382 ATPases associated with a variety of cellular activities ACO02_RS13145 SM01323 ACO02_RS13145 ACO02_RS13165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACO02_RS13165 SM00954 Region found in RelA / SpoT proteins ACO02_RS13175 SM00287 Bacterial SH3 domain homologues ACO02_RS13175 SM00646 ACO02_RS13175 ACO02_RS13205 SM00382 ATPases associated with a variety of cellular activities ACO02_RS13240 SM00028 Tetratricopeptide repeats ACO02_RS13245 SM00382 ATPases associated with a variety of cellular activities ACO02_RS13250 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ACO02_RS13260 SM00732 Likely ribonuclease with RNase H fold. ACO02_RS13295 SM00796 Allophanate hydrolase subunit 1 ACO02_RS13300 SM00797 Allophanate hydrolase subunit 2 ACO02_RS13310 SM00878 Biotin carboxylase C-terminal domain ACO02_RS13360 SM01103 ACO02_RS13360 ACO02_RS13370 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ACO02_RS13385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ACO02_RS13395 SM00849 Metallo-beta-lactamase superfamily ACO02_RS13410 SM00838 Elongation factor G C-terminus ACO02_RS13420 SM00729 Elongator protein 3, MiaB family, Radical SAM ACO02_RS13440 SM00271 DnaJ molecular chaperone homology domain ACO02_RS13455 SM00729 Elongator protein 3, MiaB family, Radical SAM ACO02_RS13515 SM00116 Domain in cystathionine beta-synthase and other proteins. ACO02_RS13525 SM00400 zinc finger ACO02_RS13525 SM00493 ACO02_RS13525 ACO02_RS13545 SM00487 DEAD-like helicases superfamily ACO02_RS13545 SM00490 helicase superfamily c-terminal domain ACO02_RS13550 SM00518 AP endonuclease family 2 ACO02_RS13555 SM00382 ATPases associated with a variety of cellular activities ACO02_RS13610 SM00849 Metallo-beta-lactamase superfamily ACO02_RS13670 SM00450 Rhodanese Homology Domain ACO02_RS13695 SM00841 Elongation factor P, C-terminal ACO02_RS13695 SM01185 ACO02_RS13695 ACO02_RS13705 SM00878 Biotin carboxylase C-terminal domain ACO02_RS13755 SM00861 Transketolase, pyrimidine binding domain ACO02_RS13785 SM01350 ACO02_RS13785 ACO02_RS13800 SM00354 helix_turn _helix lactose operon repressor ACO02_RS13805 SM00642 Alpha-amylase domain ACO02_RS13810 SM00342 helix_turn_helix, arabinose operon control protein ACO02_RS13810 SM00871 Bacterial transcription activator, effector binding domain ACO02_RS13875 SM00363 S4 RNA-binding domain ACO02_RS13880 SM00448 cheY-homologous receiver domain ACO02_RS13880 SM00862 Transcriptional regulatory protein, C terminal ACO02_RS13885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ACO02_RS13885 SM00387 Histidine kinase-like ATPases ACO02_RS13885 SM00388 His Kinase A (phosphoacceptor) domain ACO02_RS13935 SM00530 Helix-turn-helix XRE-family like proteins ACO02_RS13940 SM00530 Helix-turn-helix XRE-family like proteins ACO02_RS13995 SM00482 DNA polymerase A domain ACO02_RS14080 SM00990 ACO02_RS14080 ACO02_RS14085 SM00487 DEAD-like helicases superfamily ACO02_RS14095 SM00507 HNH nucleases ACO02_RS14150 SM00635 Bacterial Ig-like domain 2 ACO02_RS14215 SM00287 Bacterial SH3 domain homologues ACO02_RS14215 SM00646 ACO02_RS14215 ACO02_RS14275 SM00487 DEAD-like helicases superfamily ACO02_RS14275 SM00490 helicase superfamily c-terminal domain ACO02_RS14280 SM00257 Lysin motif ACO02_RS14295 SM00870 ACO02_RS14295 ACO02_RS14320 SM00316 Ribosomal protein S1-like RNA-binding domain ACO02_RS14335 SM00411 bacterial (prokaryotic) histone like domain ACO02_RS14360 SM00562 ACO02_RS14360 ACO02_RS14385 SM00028 Tetratricopeptide repeats ACO02_RS14390 SM00914 ACO02_RS14390 ACO02_RS14425 SM00479 ACO02_RS14425 ACO02_RS14425 SM00491 ACO02_RS14425 ACO02_RS14440 SM00478 endonuclease III ACO02_RS14440 SM00525 ACO02_RS14440 ACO02_RS14490 SM00981 ACO02_RS14490 ACO02_RS14510 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ACO02_RS14510 SM00475 5'-3' exonuclease ACO02_RS14515 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ACO02_RS14515 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ACO02_RS14535 SM00844 GA module ACO02_RS14560 SM00932 Scaffold protein Nfu/NifU N terminal ACO02_RS14565 SM00567 E-Z type HEAT repeats ACO02_RS14565 SM00932 Scaffold protein Nfu/NifU N terminal ACO02_RS14610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ACO02_RS14610 SM00245 tail specific protease ACO02_RS14625 SM00014 Acid phosphatase homologues ACO02_RS14630 SM01321 ACO02_RS14630 ACO02_RS14645 SM00448 cheY-homologous receiver domain ACO02_RS14645 SM00862 Transcriptional regulatory protein, C terminal ACO02_RS14650 SM00387 Histidine kinase-like ATPases ACO02_RS14650 SM00388 His Kinase A (phosphoacceptor) domain ACO02_RS14655 SM00861 Transketolase, pyrimidine binding domain ACO02_RS14680 SM00327 von Willebrand factor (vWF) type A domain ACO02_RS14720 SM00357 Cold shock protein domain ACO02_RS14735 SM01005 Alanine racemase, C-terminal domain ACO02_RS14755 SM01130 ACO02_RS14755 ACO02_RS14760 SM00859 Semialdehyde dehydrogenase, NAD binding domain ACO02_RS14770 SM00382 ATPases associated with a variety of cellular activities ACO02_RS14800 SM00382 ATPases associated with a variety of cellular activities ACO02_RS14835 SM00382 ATPases associated with a variety of cellular activities ACO02_RS14840 SM00382 ATPases associated with a variety of cellular activities ACO02_RS14945 SM01061 CAT RNA binding domain ACO02_RS14960 SM00434 DNA Topoisomerase IV ACO02_RS14965 SM00387 Histidine kinase-like ATPases ACO02_RS14965 SM00433 TopoisomeraseII ACO02_RS14970 SM01207 ACO02_RS14970 ACO02_RS15085 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ACO02_RS15085 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ACO02_RS15085 SM00493 ACO02_RS15085 ACO02_RS15160 SM00382 ATPases associated with a variety of cellular activities ACO02_RS15165 SM00091 PAS domain ACO02_RS15165 SM00382 ATPases associated with a variety of cellular activities ACO02_RS15175 SM00857 Resolvase, N terminal domain ACO02_RS15240 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ACO02_RS15245 SM00829 Enoylreductase ACO02_RS15250 SM00347 helix_turn_helix multiple antibiotic resistance protein ACO02_RS15275 SM00857 Resolvase, N terminal domain