locus-tag	class	description
USA300HOU_RS00015	COG2501	S4 domain
USA300HOU_RS00035	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
USA300HOU_RS00060	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
USA300HOU_RS00070	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
USA300HOU_RS00080	COG0305	Participates in initiation and elongation during chromosome replication
USA300HOU_RS00110	COG4863	YycH protein
USA300HOU_RS00120	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
USA300HOU_RS00125	COG0737	Belongs to the 5'-nucleotidase family
USA300HOU_RS00150	COG0584	glycerophosphoryl diester phosphodiesterase
USA300HOU_RS00155	COG2030	dehydratase
USA300HOU_RS00225	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
USA300HOU_RS00230	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
USA300HOU_RS00265	COG2801	Transposase and inactivated derivatives
USA300HOU_RS00270	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
USA300HOU_RS00300	COG2801	Transposase and inactivated derivatives
USA300HOU_RS00310	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
USA300HOU_RS00315	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
USA300HOU_RS00325	COG2235	arginine
USA300HOU_RS00375	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
USA300HOU_RS00380	COG4172	Belongs to the ABC transporter superfamily
USA300HOU_RS00385	COG1124	(ABC) transporter
USA300HOU_RS00395	COG1388	LysM domain
USA300HOU_RS00425	COG0730	response to heat
USA300HOU_RS00430	COG1937	Protein conserved in bacteria
USA300HOU_RS00435	COG2210	Belongs to the sulfur carrier protein TusA family
USA300HOU_RS00440	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
USA300HOU_RS00475	COG0655	NAD(P)H dehydrogenase (quinone) activity
USA300HOU_RS00490	COG0583	DNA-binding transcription factor activity
USA300HOU_RS00510	COG0823	Involved in the tonB-independent uptake of proteins
USA300HOU_RS00540	COG1473	amidohydrolase
USA300HOU_RS00550	COG1283	sodium-dependent phosphate transmembrane transporter activity
USA300HOU_RS00555	COG4716	Myosin-crossreactive antigen
USA300HOU_RS00560	COG0697	spore germination
USA300HOU_RS00575	COG1620	l-lactate permease
USA300HOU_RS00590	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
USA300HOU_RS00595	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
USA300HOU_RS00600	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
USA300HOU_RS00610	COG2423	ornithine cyclodeaminase activity
USA300HOU_RS00615	COG4264	IucA IucC family
USA300HOU_RS00620	COG2814	Major facilitator Superfamily
USA300HOU_RS00625	COG4264	IucA IucC family
USA300HOU_RS00630	COG4264	IucA IucC family
USA300HOU_RS00640	COG0019	diaminopimelate decarboxylase activity
USA300HOU_RS00645	COG1475	DNA binding
USA300HOU_RS00675	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
USA300HOU_RS00680	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
USA300HOU_RS00685	COG0438	transferase activity, transferring glycosyl groups
USA300HOU_RS00720	COG0813	purine-nucleoside phosphorylase activity
USA300HOU_RS00725	COG2814	Major facilitator Superfamily
USA300HOU_RS00745	COG3639	organic phosphonate transmembrane transporter activity
USA300HOU_RS00765	COG0737	Belongs to the 5'-nucleotidase family
USA300HOU_RS00795	COG1012	belongs to the aldehyde dehydrogenase family
USA300HOU_RS00795	COG1454	alcohol dehydrogenase
USA300HOU_RS00820	COG1086	Polysaccharide biosynthesis protein
USA300HOU_RS00860	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
USA300HOU_RS00870	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
USA300HOU_RS00875	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
USA300HOU_RS00885	COG2832	Protein of unknown function (DUF454)
USA300HOU_RS00920	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
USA300HOU_RS00930	COG5609	conserved protein (DUF2294)
USA300HOU_RS00980	COG1114	Component of the transport system for branched-chain amino acids
USA300HOU_RS00985	COG1335	isochorismatase
USA300HOU_RS00990	COG3961	Belongs to the TPP enzyme family
USA300HOU_RS01020	COG1737	Transcriptional regulator
USA300HOU_RS01055	COG0601	transmembrane transport
USA300HOU_RS01060	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
USA300HOU_RS01070	COG0405	Gamma-glutamyltransferase
USA300HOU_RS01090	COG3842	ATPase activity
USA300HOU_RS01100	COG1175	transmembrane transport
USA300HOU_RS01105	COG3833	ABC-type maltose transport systems, permease component
USA300HOU_RS01110	COG0673	inositol 2-dehydrogenase activity
USA300HOU_RS01115	COG0673	inositol 2-dehydrogenase activity
USA300HOU_RS01125	COG1755	Isoprenylcysteine carboxyl methyltransferase
USA300HOU_RS01190	COG0183	Belongs to the thiolase family
USA300HOU_RS01200	COG1960	acyl-CoA dehydrogenase activity
USA300HOU_RS01205	COG0318	PFAM AMP-dependent synthetase and ligase
USA300HOU_RS01220	COG0747	negative chemotaxis
USA300HOU_RS01225	COG3189	MarR family transcriptional regulator
USA300HOU_RS01255	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
USA300HOU_RS01255	COG2190	(PTS) system
USA300HOU_RS01255	COG1263	PTS System
USA300HOU_RS01260	COG1957	nucleoside hydrolase
USA300HOU_RS01280	COG3414	Phosphotransferase system galactitol-specific IIB component
USA300HOU_RS01285	COG3775	system Galactitol-specific IIC component
USA300HOU_RS01290	COG1063	alcohol dehydrogenase
USA300HOU_RS01300	COG1063	alcohol dehydrogenase
USA300HOU_RS01310	COG1063	alcohol dehydrogenase
USA300HOU_RS01315	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
USA300HOU_RS01320	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
USA300HOU_RS01330	COG1063	alcohol dehydrogenase
USA300HOU_RS01335	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
USA300HOU_RS01370	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
USA300HOU_RS01375	COG1263	PTS System
USA300HOU_RS01375	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
USA300HOU_RS01375	COG2190	(PTS) system
USA300HOU_RS01380	COG2723	6-phospho-beta-galactosidase activity
USA300HOU_RS01390	COG2226	methyltransferase
USA300HOU_RS01450	COG1131	(ABC) transporter
USA300HOU_RS01480	COG1388	LysM domain
USA300HOU_RS01480	COG3942	CHAP domain
USA300HOU_RS01625	COG1114	Component of the transport system for branched-chain amino acids
USA300HOU_RS01630	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
USA300HOU_RS01640	COG0577	efflux transmembrane transporter activity
USA300HOU_RS01665	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
USA300HOU_RS01670	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
USA300HOU_RS01695	COG3314	Sporulation integral membrane protein YlbJ
USA300HOU_RS01720	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
USA300HOU_RS01750	COG3037	sugar-specific permease SgaT UlaA
USA300HOU_RS01760	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
USA300HOU_RS01765	COG3711	transcriptional antiterminator
USA300HOU_RS01785	COG2271	Major facilitator Superfamily
USA300HOU_RS01790	COG0346	lactoylglutathione lyase activity
USA300HOU_RS01795	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
USA300HOU_RS01800	COG0431	NADPH-dependent FMN reductase
USA300HOU_RS01815	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
USA300HOU_RS01830	COG0672	)-iron permease
USA300HOU_RS01835	COG0805	protein transport
USA300HOU_RS01840	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
USA300HOU_RS01850	COG1476	TRANSCRIPTIONal
USA300HOU_RS01860	COG1131	(ABC) transporter
USA300HOU_RS01895	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
USA300HOU_RS01895	COG0646	methionine synthase
USA300HOU_RS01900	COG0626	cystathionine gamma-synthase activity
USA300HOU_RS01905	COG0626	cystathionine gamma-synthase activity
USA300HOU_RS01910	COG1475	DNA binding
USA300HOU_RS01915	COG0668	transmembrane transport
USA300HOU_RS01920	COG4481	Protein conserved in bacteria
USA300HOU_RS01925	COG0012	GTP binding
USA300HOU_RS01955	COG4974	Belongs to the 'phage' integrase family
USA300HOU_RS02015	COG3634	alkyl hydroperoxide reductase activity
USA300HOU_RS02030	COG1823	symporter activity
USA300HOU_RS02060	COG2233	PERMEase
USA300HOU_RS02095	COG3759	membrane
USA300HOU_RS02265	COG0523	cobalamin synthesis protein
USA300HOU_RS02275	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
USA300HOU_RS02285	COG5609	conserved protein (DUF2294)
USA300HOU_RS02300	COG1647	Serine aminopeptidase, S33
USA300HOU_RS02310	COG0733	neurotransmitter:sodium symporter activity
USA300HOU_RS02315	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
USA300HOU_RS02320	COG0626	cystathionine gamma-synthase activity
USA300HOU_RS02330	COG2011	ABC-type metal ion transport system permease component
USA300HOU_RS02335	COG1464	Belongs to the NlpA lipoprotein family
USA300HOU_RS02370	COG0583	DNA-binding transcription factor activity
USA300HOU_RS02375	COG0069	glutamate synthase activity
USA300HOU_RS02375	COG0067	glutamate synthase
USA300HOU_RS02375	COG0070	glutamate synthase
USA300HOU_RS02380	COG0493	'glutamate synthase
USA300HOU_RS02390	COG1263	PTS System
USA300HOU_RS02390	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
USA300HOU_RS02395	COG0366	Alpha amylase catalytic
USA300HOU_RS02400	COG2188	Transcriptional regulator
USA300HOU_RS02415	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
USA300HOU_RS02450	COG1982	Orn Lys Arg decarboxylase major
USA300HOU_RS02460	COG3870	Protein conserved in bacteria
USA300HOU_RS02470	COG0470	DNA polymerase III
USA300HOU_RS02475	COG1774	PSP1 C-terminal conserved region
USA300HOU_RS02485	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
USA300HOU_RS02495	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
USA300HOU_RS02510	COG0084	hydrolase, TatD family'
USA300HOU_RS02515	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
USA300HOU_RS02525	COG4466	Protein conserved in bacteria
USA300HOU_RS02535	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
USA300HOU_RS02540	COG0251	oxidation-reduction process
USA300HOU_RS02585	COG2244	polysaccharide biosynthetic process
USA300HOU_RS02590	COG3956	TIGRFAM MazG family protein
USA300HOU_RS02595	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
USA300HOU_RS02605	COG1098	S1 RNA binding domain
USA300HOU_RS02620	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
USA300HOU_RS02645	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
USA300HOU_RS02725	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
USA300HOU_RS02740	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
USA300HOU_RS02750	COG3880	PFAM UvrB UvrC protein
USA300HOU_RS02770	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
USA300HOU_RS02775	COG4956	integral membrane protein (PIN domain superfamily)
USA300HOU_RS02795	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
USA300HOU_RS02845	COG2813	Specifically methylates the guanine in position
USA300HOU_RS02885	COG1473	amidohydrolase
USA300HOU_RS02915	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
USA300HOU_RS02920	COG1428	Deoxynucleoside kinase
USA300HOU_RS02925	COG1428	Deoxynucleoside kinase
USA300HOU_RS02935	COG0561	phosphatase activity
USA300HOU_RS02975	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
USA300HOU_RS03080	COG0095	Lipoate-protein ligase
USA300HOU_RS03085	COG0083	homoserine kinase activity
USA300HOU_RS03105	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
USA300HOU_RS03190	COG0667	Aldo Keto reductase
USA300HOU_RS03195	COG0655	NAD(P)H dehydrogenase (quinone) activity
USA300HOU_RS03205	COG1078	dGTPase activity
USA300HOU_RS03240	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
USA300HOU_RS03245	COG4139	cobalamin transport
USA300HOU_RS03285	COG2826	transposase and inactivated derivatives, IS30 family
USA300HOU_RS03315	COG1674	ftsk spoiiie
USA300HOU_RS03320	COG0433	COG0433 Predicted ATPase
USA300HOU_RS03340	COG2946	Replication initiation factor
USA300HOU_RS03375	COG4974	Belongs to the 'phage' integrase family
USA300HOU_RS03420	COG0803	Belongs to the bacterial solute-binding protein 9 family
USA300HOU_RS03425	COG1108	ABC-type Mn2 Zn2 transport systems permease components
USA300HOU_RS03430	COG1121	(ABC) transporter
USA300HOU_RS03435	COG1321	iron dependent repressor
USA300HOU_RS03445	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
USA300HOU_RS03455	COG1682	transport, permease protein
USA300HOU_RS03460	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
USA300HOU_RS03465	COG1216	Glycosyl transferase, family 2
USA300HOU_RS03470	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
USA300HOU_RS03475	COG1686	Belongs to the peptidase S11 family
USA300HOU_RS03480	COG1132	(ABC) transporter
USA300HOU_RS03485	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
USA300HOU_RS03495	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
USA300HOU_RS03500	COG1120	ATPase activity
USA300HOU_RS03505	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
USA300HOU_RS03510	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
USA300HOU_RS03515	COG2376	Dihydroxyacetone kinase
USA300HOU_RS03525	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
USA300HOU_RS03535	COG3949	Membrane
USA300HOU_RS03560	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
USA300HOU_RS03575	COG1136	(ABC) transporter
USA300HOU_RS03580	COG0577	efflux transmembrane transporter activity
USA300HOU_RS03585	COG1392	Phosphate transport regulator
USA300HOU_RS03590	COG0306	phosphate transporter
USA300HOU_RS03595	COG3942	CHAP domain
USA300HOU_RS03595	COG1388	LysM domain
USA300HOU_RS03605	COG4977	sequence-specific DNA binding
USA300HOU_RS03605	COG1917	Cupin 2, conserved barrel domain protein
USA300HOU_RS03635	COG0583	DNA-binding transcription factor activity
USA300HOU_RS03645	COG2814	Major facilitator Superfamily
USA300HOU_RS03650	COG2839	Protein conserved in bacteria
USA300HOU_RS03680	COG1611	Belongs to the LOG family
USA300HOU_RS03700	COG4988	ABC transporter
USA300HOU_RS03705	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
USA300HOU_RS03715	COG0523	cobalamin synthesis protein
USA300HOU_RS03720	COG4989	oxidoreductase activity
USA300HOU_RS03730	COG0471	metal ion transport
USA300HOU_RS03735	COG0415	Belongs to the DNA photolyase family
USA300HOU_RS03765	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
USA300HOU_RS03770	COG1349	DNA-binding transcription factor activity
USA300HOU_RS03775	COG1105	Belongs to the carbohydrate kinase PfkB family
USA300HOU_RS03780	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
USA300HOU_RS03780	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
USA300HOU_RS03780	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
USA300HOU_RS03790	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
USA300HOU_RS03795	COG1253	flavin adenine dinucleotide binding
USA300HOU_RS03800	COG0656	L-ascorbic acid biosynthetic process
USA300HOU_RS03805	COG0463	Glycosyl transferase, family 2
USA300HOU_RS03840	COG0720	synthase
USA300HOU_RS03850	COG0512	Glutamine amidotransferase of anthranilate synthase
USA300HOU_RS03850	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
USA300HOU_RS03855	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
USA300HOU_RS03890	COG0488	(ABC) transporter
USA300HOU_RS03895	COG0514	ATP-dependent DNA helicase (RecQ)
USA300HOU_RS03900	COG0517	IMP dehydrogenase activity
USA300HOU_RS03900	COG1125	glycine betaine transport
USA300HOU_RS03905	COG1174	glycine betaine transport
USA300HOU_RS03930	COG3104	oligopeptide transport
USA300HOU_RS03950	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
USA300HOU_RS03955	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
USA300HOU_RS03970	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
USA300HOU_RS03975	COG4605	iron ion homeostasis
USA300HOU_RS03980	COG4604	ABC transporter, ATP-binding protein
USA300HOU_RS03985	COG4607	ABC-type enterochelin transport system periplasmic component
USA300HOU_RS04040	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
USA300HOU_RS04045	COG1739	Uncharacterized protein family UPF0029
USA300HOU_RS04055	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
USA300HOU_RS04060	COG1040	competence protein
USA300HOU_RS04090	COG1388	LysM domain
USA300HOU_RS04090	COG3942	CHAP domain
USA300HOU_RS04150	COG0391	Required for morphogenesis under gluconeogenic growth conditions
USA300HOU_RS04215	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
USA300HOU_RS04220	COG1647	Serine aminopeptidase, S33
USA300HOU_RS04225	COG0557	exoribonuclease II activity
USA300HOU_RS04295	COG1278	Cold shock
USA300HOU_RS04335	COG0406	alpha-ribazole phosphatase activity
USA300HOU_RS04340	COG1279	arginine transmembrane transporter activity
USA300HOU_RS04365	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
USA300HOU_RS04370	COG1393	Belongs to the ArsC family
USA300HOU_RS04385	COG3878	Protein conserved in bacteria
USA300HOU_RS04395	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
USA300HOU_RS04410	COG2011	ABC-type metal ion transport system permease component
USA300HOU_RS04415	COG1464	Belongs to the NlpA lipoprotein family
USA300HOU_RS04420	COG0582	viral genome integration into host DNA
USA300HOU_RS04515	COG0396	ATPase activity
USA300HOU_RS04520	COG0719	Fe-S assembly protein
USA300HOU_RS04530	COG0822	iron-sulfur transferase activity
USA300HOU_RS04550	COG1253	flavin adenine dinucleotide binding
USA300HOU_RS04565	COG1801	Protein of unknown function DUF72
USA300HOU_RS04570	COG0730	response to heat
USA300HOU_RS04585	COG4470	Protein conserved in bacteria
USA300HOU_RS04595	COG2445	Protein of unknown function DUF86
USA300HOU_RS04625	COG1696	Membrane protein involved in D-alanine export
USA300HOU_RS04635	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
USA300HOU_RS04640	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
USA300HOU_RS04645	COG4837	Protein of unknown function (DUF1462)
USA300HOU_RS04650	COG1252	NADH dehydrogenase
USA300HOU_RS04660	COG0316	Belongs to the HesB IscA family
USA300HOU_RS04670	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
USA300HOU_RS04675	COG2056	Na+-H+ antiporter family
USA300HOU_RS04680	COG2050	protein possibly involved in aromatic compounds catabolism
USA300HOU_RS04735	COG1098	S1 RNA binding domain
USA300HOU_RS04740	COG1902	pentaerythritol trinitrate reductase activity
USA300HOU_RS04760	COG0584	glycerophosphoryl diester phosphodiesterase
USA300HOU_RS04780	COG0398	Pfam SNARE associated Golgi protein
USA300HOU_RS04820	COG0561	phosphatase activity
USA300HOU_RS04845	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
USA300HOU_RS04860	COG1881	PFAM PEBP family protein
USA300HOU_RS04890	COG0601	transmembrane transport
USA300HOU_RS04895	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
USA300HOU_RS04900	COG0444	Belongs to the ABC transporter superfamily
USA300HOU_RS04905	COG4608	Belongs to the ABC transporter superfamily
USA300HOU_RS04910	COG4166	transmembrane transport
USA300HOU_RS04915	COG0747	negative chemotaxis
USA300HOU_RS04920	COG0444	Belongs to the ABC transporter superfamily
USA300HOU_RS04925	COG4608	Belongs to the ABC transporter superfamily
USA300HOU_RS04930	COG0601	transmembrane transport
USA300HOU_RS04935	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
USA300HOU_RS04960	COG1164	Oligoendopeptidase f
USA300HOU_RS04970	COG2346	COG2346, Truncated hemoglobins
USA300HOU_RS04985	COG2357	RelA SpoT domain protein
USA300HOU_RS04995	COG0564	pseudouridine synthase activity
USA300HOU_RS05000	COG2239	Acts as a magnesium transporter
USA300HOU_RS05005	COG0569	domain protein
USA300HOU_RS05005	COG0475	glutathione-regulated potassium exporter activity
USA300HOU_RS05015	COG0628	permease
USA300HOU_RS05020	COG1115	amino acid carrier protein
USA300HOU_RS05060	COG0861	Integral membrane protein TerC family
USA300HOU_RS05070	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
USA300HOU_RS05075	COG0737	Belongs to the 5'-nucleotidase family
USA300HOU_RS05090	COG4903	ComK protein
USA300HOU_RS05105	COG4873	Protein conserved in bacteria
USA300HOU_RS05160	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
USA300HOU_RS05170	COG2314	TM2 domain
USA300HOU_RS05175	COG0456	acetyltransferase
USA300HOU_RS05180	COG1575	Belongs to the MenA family. Type 1 subfamily
USA300HOU_RS05185	COG1169	isochorismate synthase
USA300HOU_RS05195	COG2267	carboxylic ester hydrolase activity
USA300HOU_RS05220	COG0436	Aminotransferase
USA300HOU_RS05225	COG3594	Acyltransferase
USA300HOU_RS05255	COG1316	TRANSCRIPTIONal
USA300HOU_RS05260	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
USA300HOU_RS05300	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
USA300HOU_RS05315	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
USA300HOU_RS05355	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
USA300HOU_RS05360	COG4172	Belongs to the ABC transporter superfamily
USA300HOU_RS05365	COG4721	ABC-type cobalt transport system, permease component
USA300HOU_RS05385	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
USA300HOU_RS05410	COG1271	oxidase subunit
USA300HOU_RS05415	COG1294	oxidase, subunit
USA300HOU_RS05420	COG0569	domain protein
USA300HOU_RS05490	COG1176	ABC-type spermidine putrescine transport system, permease component I
USA300HOU_RS05495	COG1177	transmembrane transport
USA300HOU_RS05500	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
USA300HOU_RS05525	COG0483	inositol monophosphate 1-phosphatase activity
USA300HOU_RS05535	COG1217	gtp-binding protein TYPA
USA300HOU_RS05545	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
USA300HOU_RS05555	COG0772	Belongs to the SEDS family
USA300HOU_RS05590	COG3679	Belongs to the UPF0342 family
USA300HOU_RS05610	COG0742	ribosomal rna small subunit methyltransferase
USA300HOU_RS05670	COG4509	Sortase family
USA300HOU_RS05685	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
USA300HOU_RS05715	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
USA300HOU_RS05715	COG1796	DNA polymerase
USA300HOU_RS05740	COG2009	succinate dehydrogenase
USA300HOU_RS05745	COG1053	succinate dehydrogenase
USA300HOU_RS05750	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
USA300HOU_RS05870	COG1288	antiporter activity
USA300HOU_RS05905	COG1011	Hydrolase
USA300HOU_RS05930	COG4839	cell division protein FtsL
USA300HOU_RS05935	COG0768	penicillin binding
USA300HOU_RS05950	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
USA300HOU_RS05955	COG0849	cell division
USA300HOU_RS05970	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
USA300HOU_RS05980	COG0762	integral membrane protein
USA300HOU_RS05985	COG2302	S4 RNA-binding domain
USA300HOU_RS05990	COG3599	regulation of cell shape
USA300HOU_RS06000	COG2514	catechol 2,3-dioxygenase activity
USA300HOU_RS06015	COG0564	pseudouridine synthase activity
USA300HOU_RS06025	COG2233	PERMEase
USA300HOU_RS06070	COG1293	RNA-binding protein homologous to eukaryotic snRNP
USA300HOU_RS06085	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
USA300HOU_RS06090	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
USA300HOU_RS06100	COG2314	TM2 domain
USA300HOU_RS06115	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
USA300HOU_RS06115	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
USA300HOU_RS06125	COG0631	protein serine/threonine phosphatase activity
USA300HOU_RS06140	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
USA300HOU_RS06155	COG1302	Protein conserved in bacteria
USA300HOU_RS06165	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
USA300HOU_RS06205	COG1196	nuclear chromosome segregation
USA300HOU_RS06210	COG0552	protein localization to endoplasmic reticulum
USA300HOU_RS06220	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
USA300HOU_RS06285	COG0758	DNA mediated transformation
USA300HOU_RS06380	COG0195	Participates in both transcription termination and antitermination
USA300HOU_RS06385	COG2740	Nucleic-acid-binding protein implicated in transcription termination
USA300HOU_RS06410	COG0196	riboflavin kinase activity
USA300HOU_RS06435	COG2188	Transcriptional regulator
USA300HOU_RS06440	COG0612	Peptidase, M16
USA300HOU_RS06445	COG0612	Peptidase, M16
USA300HOU_RS06450	COG0300	oxidoreductase activity
USA300HOU_RS06470	COG1058	Belongs to the CinA family
USA300HOU_RS06470	COG1546	Belongs to the CinA family
USA300HOU_RS06490	COG1692	metallophosphoesterase
USA300HOU_RS06495	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
USA300HOU_RS06495	COG0674	pyruvate-flavodoxin oxidoreductase activity
USA300HOU_RS06500	COG1013	pyruvate-flavodoxin oxidoreductase activity
USA300HOU_RS06535	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
USA300HOU_RS06540	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
USA300HOU_RS06565	COG1923	regulation of RNA biosynthetic process
USA300HOU_RS06575	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
USA300HOU_RS06580	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
USA300HOU_RS06585	COG0789	Transcriptional regulator
USA300HOU_RS06705	COG1131	(ABC) transporter
USA300HOU_RS06720	COG2197	response regulator
USA300HOU_RS06730	COG1525	nuclease
USA300HOU_RS06745	COG0527	aspartate kinase activity
USA300HOU_RS06750	COG0460	homoserine dehydrogenase
USA300HOU_RS06755	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
USA300HOU_RS06780	COG0833	amino acid
USA300HOU_RS06810	COG2340	Cysteine-rich secretory protein family
USA300HOU_RS06845	COG4846	Membrane protein involved in cytochrome C biogenesis
USA300HOU_RS06865	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
USA300HOU_RS06875	COG0824	Thioesterase
USA300HOU_RS06895	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
USA300HOU_RS06905	COG1115	amino acid carrier protein
USA300HOU_RS06920	COG0628	permease
USA300HOU_RS06925	COG0392	lysyltransferase activity
USA300HOU_RS06925	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
USA300HOU_RS06945	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
USA300HOU_RS06955	COG1363	Peptidase, m42
USA300HOU_RS06960	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
USA300HOU_RS06965	COG0512	Glutamine amidotransferase of anthranilate synthase
USA300HOU_RS07005	COG0561	phosphatase activity
USA300HOU_RS07050	COG0704	Plays a role in the regulation of phosphate uptake
USA300HOU_RS07060	COG0581	inorganic phosphate transmembrane transporter activity
USA300HOU_RS07065	COG0573	inorganic phosphate transmembrane transporter activity
USA300HOU_RS07090	COG0488	(ABC) transporter
USA300HOU_RS07095	COG0527	aspartate kinase activity
USA300HOU_RS07100	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
USA300HOU_RS07185	COG4548	von Willebrand factor, type A
USA300HOU_RS07240	COG0671	phosphoesterase, PA-phosphatase related
USA300HOU_RS07320	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
USA300HOU_RS07350	COG0531	amino acid
USA300HOU_RS07365	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
USA300HOU_RS07370	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
USA300HOU_RS07390	COG0116	Belongs to the methyltransferase superfamily
USA300HOU_RS07420	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
USA300HOU_RS07420	COG4499	WXG100 protein secretion system (Wss), protein YukC
USA300HOU_RS07430	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
USA300HOU_RS07435	COG3935	DnaD domain protein
USA300HOU_RS07460	COG0438	transferase activity, transferring glycosyl groups
USA300HOU_RS07465	COG1694	Mazg nucleotide pyrophosphohydrolase
USA300HOU_RS07470	COG2738	Putative neutral zinc metallopeptidase
USA300HOU_RS07475	COG4347	Protein of unknown function (DUF1405)
USA300HOU_RS07515	COG0142	geranyltranstransferase activity
USA300HOU_RS07580	COG0492	ferredoxin-NADP+ reductase activity
USA300HOU_RS07595	COG0514	ATP-dependent DNA helicase (RecQ)
USA300HOU_RS07605	COG1141	Ferredoxin
USA300HOU_RS07655	COG1388	LysM domain
USA300HOU_RS07655	COG0860	N-Acetylmuramoyl-L-alanine amidase
USA300HOU_RS07705	COG3953	SLT domain
USA300HOU_RS07705	COG5280	Phage tail tape measure protein TP901
USA300HOU_RS07960	COG0582	viral genome integration into host DNA
USA300HOU_RS07975	COG5002	protein histidine kinase activity
USA300HOU_RS07980	COG0745	RESPONSE REGULATOR receiver
USA300HOU_RS07985	COG1187	pseudouridine synthase activity
USA300HOU_RS08010	COG0735	belongs to the Fur family
USA300HOU_RS08015	COG0494	nUDIX hydrolase
USA300HOU_RS08020	COG0667	Aldo Keto reductase
USA300HOU_RS08030	COG4221	oxidoreductase activity
USA300HOU_RS08045	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
USA300HOU_RS08055	COG0366	Alpha amylase catalytic
USA300HOU_RS08060	COG1609	Transcriptional regulator
USA300HOU_RS08080	COG2195	Cleaves the N-terminal amino acid of tripeptides
USA300HOU_RS08090	COG4129	membrane
USA300HOU_RS08100	COG0508	dehydrogenase complex catalyzes the overall conversion of
USA300HOU_RS08105	COG0022	dehydrogenase e1 component
USA300HOU_RS08110	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
USA300HOU_RS08115	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
USA300HOU_RS08120	COG0497	DNA recombination
USA300HOU_RS08150	COG1302	Protein conserved in bacteria
USA300HOU_RS08155	COG0439	Biotin carboxylase
USA300HOU_RS08160	COG0511	ligase activity, forming carbon-carbon bonds
USA300HOU_RS08170	COG0006	proline dipeptidase activity
USA300HOU_RS08185	COG0095	Lipoate-protein ligase
USA300HOU_RS08190	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
USA300HOU_RS08235	COG4537	Required for transformation and DNA binding
USA300HOU_RS08240	COG1459	type II secretion system
USA300HOU_RS08245	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
USA300HOU_RS08250	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
USA300HOU_RS08255	COG0011	TIGRFAM Protein of
USA300HOU_RS08260	COG1940	carbohydrate kinase activity
USA300HOU_RS08265	COG4483	Protein conserved in bacteria
USA300HOU_RS08275	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
USA300HOU_RS08285	COG0768	penicillin binding
USA300HOU_RS08300	COG1108	ABC-type Mn2 Zn2 transport systems permease components
USA300HOU_RS08305	COG1121	(ABC) transporter
USA300HOU_RS08315	COG0513	Belongs to the DEAD box helicase family
USA300HOU_RS08325	COG2384	SAM-dependent methyltransferase
USA300HOU_RS08345	COG0517	IMP dehydrogenase activity
USA300HOU_RS08365	COG0295	cytidine deaminase activity
USA300HOU_RS08380	COG1702	phosphate starvation-inducible protein PhoH
USA300HOU_RS08395	COG1030	water channel activity
USA300HOU_RS08405	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
USA300HOU_RS08410	COG1385	rRNA (uridine-N3-)-methyltransferase activity
USA300HOU_RS08440	COG0635	Involved in the biosynthesis of porphyrin-containing compound
USA300HOU_RS08460	COG1466	dna polymerase III delta subunit
USA300HOU_RS08465	COG0658	competence protein
USA300HOU_RS08465	COG2333	competence protein COMEC
USA300HOU_RS08470	COG2131	deaminase
USA300HOU_RS08480	COG2226	methyltransferase
USA300HOU_RS08485	COG0799	negative regulation of ribosome biogenesis
USA300HOU_RS08490	COG1713	HD superfamily hydrolase involved in NAD metabolism
USA300HOU_RS08500	COG1534	Rna-binding protein
USA300HOU_RS08510	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
USA300HOU_RS08515	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
USA300HOU_RS08540	COG3177	Filamentation induced by cAMP protein fic
USA300HOU_RS08545	COG1914	H( )-stimulated, divalent metal cation uptake system
USA300HOU_RS08555	COG0439	Biotin carboxylase
USA300HOU_RS08560	COG0511	ligase activity, forming carbon-carbon bonds
USA300HOU_RS08565	COG1984	allophanate hydrolase subunit 2
USA300HOU_RS08570	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
USA300HOU_RS08585	COG0826	peptidase U32
USA300HOU_RS08590	COG0826	peptidase U32
USA300HOU_RS08620	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
USA300HOU_RS08635	COG1104	cysteine desulfurase activity
USA300HOU_RS08640	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
USA300HOU_RS08655	COG1959	2 iron, 2 sulfur cluster binding
USA300HOU_RS08660	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
USA300HOU_RS08665	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
USA300HOU_RS08705	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
USA300HOU_RS08705	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
USA300HOU_RS08710	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
USA300HOU_RS08710	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
USA300HOU_RS08715	COG1862	Preprotein translocase
USA300HOU_RS08755	COG2868	ribosomal protein
USA300HOU_RS08795	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
USA300HOU_RS08805	COG0285	dihydrofolate synthase activity
USA300HOU_RS08815	COG2818	Glycosylase
USA300HOU_RS08850	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
USA300HOU_RS08885	COG4112	unkown
USA300HOU_RS08910	COG0833	amino acid
USA300HOU_RS08925	COG1484	DNA-dependent DNA replication
USA300HOU_RS08955	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
USA300HOU_RS08955	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
USA300HOU_RS08965	COG5002	protein histidine kinase activity
USA300HOU_RS08970	COG0745	RESPONSE REGULATOR receiver
USA300HOU_RS08985	COG0372	Belongs to the citrate synthase family
USA300HOU_RS08990	COG1113	amino acid transport
USA300HOU_RS09025	COG0281	malic enzyme
USA300HOU_RS09035	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
USA300HOU_RS09040	COG4109	DRTGG domain
USA300HOU_RS09080	COG0827	DNA restriction-modification system
USA300HOU_RS09100	COG1104	cysteine desulfurase activity
USA300HOU_RS09115	COG1956	GAF domain-containing protein
USA300HOU_RS09130	COG0584	glycerophosphoryl diester phosphodiesterase
USA300HOU_RS09135	COG1764	response to oxidative stress
USA300HOU_RS09140	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
USA300HOU_RS09145	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
USA300HOU_RS09160	COG1263	PTS System
USA300HOU_RS09160	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
USA300HOU_RS09165	COG0204	Acyl-transferase
USA300HOU_RS09170	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
USA300HOU_RS09200	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
USA300HOU_RS09205	COG0454	-acetyltransferase
USA300HOU_RS09225	COG1605	Chorismate mutase
USA300HOU_RS09225	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
USA300HOU_RS09250	COG1674	ftsk spoiiie
USA300HOU_RS09255	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
USA300HOU_RS09265	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
USA300HOU_RS09270	COG1363	Peptidase, m42
USA300HOU_RS09280	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
USA300HOU_RS09290	COG0510	thiamine kinase activity
USA300HOU_RS09310	COG1187	pseudouridine synthase activity
USA300HOU_RS09315	COG2244	polysaccharide biosynthetic process
USA300HOU_RS09320	COG2081	HI0933 family
USA300HOU_RS09340	COG2814	Major facilitator Superfamily
USA300HOU_RS09345	COG1242	4 iron, 4 sulfur cluster binding
USA300HOU_RS09350	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
USA300HOU_RS09370	COG2267	carboxylic ester hydrolase activity
USA300HOU_RS09400	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
USA300HOU_RS09400	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
USA300HOU_RS09425	COG4193	domain, Protein
USA300HOU_RS09425	COG3266	domain, Protein
USA300HOU_RS09425	COG5632	N-Acetylmuramoyl-L-alanine amidase
USA300HOU_RS09455	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
USA300HOU_RS09485	COG0656	L-ascorbic acid biosynthetic process
USA300HOU_RS09510	COG1506	peptidase
USA300HOU_RS09680	COG1131	(ABC) transporter
USA300HOU_RS09785	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
USA300HOU_RS09815	COG1131	(ABC) transporter
USA300HOU_RS09820	COG0537	adenosine 5'-monophosphoramidase activity
USA300HOU_RS09850	COG0420	3'-5' exonuclease activity
USA300HOU_RS09875	COG2197	response regulator
USA300HOU_RS09880	COG4585	Histidine kinase
USA300HOU_RS09880	COG2203	Gaf domain
USA300HOU_RS09885	COG0564	pseudouridine synthase activity
USA300HOU_RS09920	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
USA300HOU_RS09925	COG1126	abc transporter atp-binding protein
USA300HOU_RS09930	COG0765	amino acid transport
USA300HOU_RS10100	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
USA300HOU_RS10105	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
USA300HOU_RS10115	COG4129	membrane
USA300HOU_RS10140	COG1988	membrane-bound metal-dependent
USA300HOU_RS10155	COG1388	LysM domain
USA300HOU_RS10155	COG1134	teichoic acid transport
USA300HOU_RS10185	COG0535	radical SAM domain protein
USA300HOU_RS10190	COG1607	acyl-coa hydrolase
USA300HOU_RS10195	COG2309	aminopeptidase activity
USA300HOU_RS10215	COG1295	ribonuclease BN
USA300HOU_RS10220	COG2197	response regulator
USA300HOU_RS10335	COG4851	CamS sex pheromone cAM373 precursor
USA300HOU_RS10345	COG0210	DNA helicase
USA300HOU_RS10355	COG4496	protein, YerC YecD
USA300HOU_RS10390	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
USA300HOU_RS10400	COG0077	Prephenate dehydratase
USA300HOU_RS10420	COG1335	isochorismatase
USA300HOU_RS10435	COG1012	belongs to the aldehyde dehydrogenase family
USA300HOU_RS10485	COG1131	(ABC) transporter
USA300HOU_RS10500	COG1725	Transcriptional regulator
USA300HOU_RS10560	COG1388	LysM domain
USA300HOU_RS10560	COG0860	N-Acetylmuramoyl-L-alanine amidase
USA300HOU_RS10570	COG1388	LysM domain
USA300HOU_RS10570	COG5632	N-Acetylmuramoyl-L-alanine amidase
USA300HOU_RS10615	COG0739	heme binding
USA300HOU_RS10665	COG0740	serine-type endopeptidase activity
USA300HOU_RS10835	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
USA300HOU_RS10885	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
USA300HOU_RS10890	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
USA300HOU_RS10895	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
USA300HOU_RS10910	COG3728	DNA packaging
USA300HOU_RS10910	COG5484	DNA packaging
USA300HOU_RS10985	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
USA300HOU_RS10990	COG1621	beta-fructofuranosidase activity
USA300HOU_RS10995	COG1609	Transcriptional regulator
USA300HOU_RS11000	COG0004	ammonium transporteR
USA300HOU_RS11005	COG0425	Belongs to the sulfur carrier protein TusA family
USA300HOU_RS11010	COG2391	methyltransferase activity
USA300HOU_RS11020	COG0488	(ABC) transporter
USA300HOU_RS11030	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
USA300HOU_RS11040	COG0456	acetyltransferase
USA300HOU_RS11045	COG1214	PFAM Peptidase M22, glycoprotease
USA300HOU_RS11050	COG0802	atpase or kinase
USA300HOU_RS11065	COG0028	Belongs to the TPP enzyme family
USA300HOU_RS11140	COG2183	response to ionizing radiation
USA300HOU_RS11145	COG1191	sigma factor activity
USA300HOU_RS11155	COG1366	Belongs to the anti-sigma-factor antagonist family
USA300HOU_RS11160	COG2208	phosphoserine phosphatase activity
USA300HOU_RS11195	COG3428	Bacterial PH domain
USA300HOU_RS11225	COG2205	protein histidine kinase activity
USA300HOU_RS11230	COG0745	RESPONSE REGULATOR receiver
USA300HOU_RS11240	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
USA300HOU_RS11250	COG0772	Belongs to the SEDS family
USA300HOU_RS11265	COG1937	Protein conserved in bacteria
USA300HOU_RS11275	COG1418	mRNA catabolic process
USA300HOU_RS11325	COG0629	single-stranded DNA binding
USA300HOU_RS11400	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
USA300HOU_RS11425	COG0009	L-threonylcarbamoyladenylate synthase
USA300HOU_RS11430	COG2890	protein-(glutamine-N5) methyltransferase activity
USA300HOU_RS11450	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
USA300HOU_RS11490	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
USA300HOU_RS11545	COG0813	purine-nucleoside phosphorylase activity
USA300HOU_RS11550	COG0783	Belongs to the Dps family
USA300HOU_RS11570	COG1482	cell wall glycoprotein biosynthetic process
USA300HOU_RS11575	COG0702	epimerase
USA300HOU_RS11580	COG0640	Transcriptional regulator
USA300HOU_RS11615	COG0561	phosphatase activity
USA300HOU_RS11620	COG1119	ATPase activity
USA300HOU_RS11635	COG3711	transcriptional antiterminator
USA300HOU_RS11665	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
USA300HOU_RS11730	COG0489	protein tyrosine kinase activity
USA300HOU_RS11735	COG2814	Major facilitator Superfamily
USA300HOU_RS11750	COG1272	protein, Hemolysin III
USA300HOU_RS11760	COG1988	membrane-bound metal-dependent
USA300HOU_RS11770	COG3314	Sporulation integral membrane protein YlbJ
USA300HOU_RS11775	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
USA300HOU_RS11780	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
USA300HOU_RS11785	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
USA300HOU_RS11795	COG3457	Alanine racemase
USA300HOU_RS11800	COG4264	IucA IucC family
USA300HOU_RS11805	COG2814	Major facilitator Superfamily
USA300HOU_RS11845	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
USA300HOU_RS11855	COG2130	NADP-dependent
USA300HOU_RS11905	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
USA300HOU_RS11925	COG0656	L-ascorbic acid biosynthetic process
USA300HOU_RS11930	COG0789	Transcriptional regulator
USA300HOU_RS11940	COG5492	domain, Protein
USA300HOU_RS11960	COG3527	Alpha-acetolactate decarboxylase
USA300HOU_RS11965	COG0028	Belongs to the TPP enzyme family
USA300HOU_RS11985	COG0542	response to heat
USA300HOU_RS12075	COG0201	protein transport
USA300HOU_RS12190	COG2252	PERMEase
USA300HOU_RS12235	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
USA300HOU_RS12305	COG1763	Mo-molybdopterin cofactor biosynthetic process
USA300HOU_RS12325	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
USA300HOU_RS12330	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
USA300HOU_RS12335	COG4149	molybdate abc transporter
USA300HOU_RS12340	COG0725	ABC transporter, periplasmic molybdate-binding protein
USA300HOU_RS12355	COG1268	BioY protein
USA300HOU_RS12370	COG1960	acyl-CoA dehydrogenase activity
USA300HOU_RS12375	COG4413	Urea transporter
USA300HOU_RS12440	COG3942	CHAP domain
USA300HOU_RS12450	COG1757	Na H antiporter
USA300HOU_RS12465	COG3942	CHAP domain
USA300HOU_RS12540	COG1113	amino acid transport
USA300HOU_RS12560	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
USA300HOU_RS12565	COG0385	Bile acid
USA300HOU_RS12575	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
USA300HOU_RS12575	COG1263	PTS System
USA300HOU_RS12580	COG1737	Transcriptional regulator
USA300HOU_RS12600	COG1028	Short-chain dehydrogenase reductase Sdr
USA300HOU_RS12605	COG1473	amidohydrolase
USA300HOU_RS12620	COG0583	DNA-binding transcription factor activity
USA300HOU_RS12645	COG2258	MOSC domain
USA300HOU_RS12665	COG1668	transmembrane transport
USA300HOU_RS12670	COG4152	abc transporter atp-binding protein
USA300HOU_RS12675	COG3152	Membrane
USA300HOU_RS12685	COG0786	glutamate:sodium symporter activity
USA300HOU_RS12695	COG0598	Magnesium transport protein CorA
USA300HOU_RS12710	COG0657	acetylesterase activity
USA300HOU_RS12720	COG2814	Major facilitator Superfamily
USA300HOU_RS12725	COG1566	PFAM secretion protein HlyD family protein
USA300HOU_RS12735	COG2814	Major facilitator Superfamily
USA300HOU_RS12805	COG1620	l-lactate permease
USA300HOU_RS12825	COG0604	alcohol dehydrogenase
USA300HOU_RS12830	COG0456	acetyltransferase
USA300HOU_RS12855	COG1511	domain protein
USA300HOU_RS12870	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
USA300HOU_RS12870	COG1263	PTS System
USA300HOU_RS12885	COG3871	stress protein (general stress protein 26)
USA300HOU_RS12925	COG0789	Transcriptional regulator
USA300HOU_RS12945	COG2181	nitrate reductase activity
USA300HOU_RS12955	COG1140	nitrate reductase beta subunit
USA300HOU_RS12960	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
USA300HOU_RS12970	COG2146	nitrite reductase [NAD(P)H] activity
USA300HOU_RS12975	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
USA300HOU_RS12985	COG0454	-acetyltransferase
USA300HOU_RS12990	COG2116	formate transmembrane transporter activity
USA300HOU_RS13005	COG3443	Belongs to the bacterial solute-binding protein 9 family
USA300HOU_RS13005	COG0803	Belongs to the bacterial solute-binding protein 9 family
USA300HOU_RS13040	COG1126	abc transporter atp-binding protein
USA300HOU_RS13045	COG0765	amino acid transport
USA300HOU_RS13050	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
USA300HOU_RS13055	COG2814	Major facilitator Superfamily
USA300HOU_RS13075	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
USA300HOU_RS13120	COG0156	8-amino-7-oxononanoate synthase activity
USA300HOU_RS13130	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
USA300HOU_RS13135	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
USA300HOU_RS13150	COG1132	(ABC) transporter
USA300HOU_RS13155	COG2375	cellular response to nickel ion
USA300HOU_RS13155	COG1132	(ABC) transporter
USA300HOU_RS13175	COG1929	Belongs to the glycerate kinase type-1 family
USA300HOU_RS13185	COG2814	Major facilitator Superfamily
USA300HOU_RS13205	COG1113	amino acid transport
USA300HOU_RS13220	COG0531	amino acid
USA300HOU_RS13245	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
USA300HOU_RS13255	COG1174	glycine betaine transport
USA300HOU_RS13265	COG1174	glycine betaine transport
USA300HOU_RS13285	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
USA300HOU_RS13290	COG0531	amino acid
USA300HOU_RS13295	COG2272	Belongs to the type-B carboxylesterase lipase family
USA300HOU_RS13300	COG2814	Major facilitator Superfamily
USA300HOU_RS13305	COG0390	transport system, permease component
USA300HOU_RS13310	COG4619	ABC transporter
USA300HOU_RS13315	COG1363	Peptidase, m42
USA300HOU_RS13335	COG4808	Protein conserved in bacteria
USA300HOU_RS13340	COG0069	glutamate synthase activity
USA300HOU_RS13355	COG1124	(ABC) transporter
USA300HOU_RS13360	COG0444	Belongs to the ABC transporter superfamily
USA300HOU_RS13365	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
USA300HOU_RS13370	COG0601	transmembrane transport
USA300HOU_RS13375	COG0747	negative chemotaxis
USA300HOU_RS13405	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
USA300HOU_RS13410	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
USA300HOU_RS13495	COG0494	nUDIX hydrolase
USA300HOU_RS13530	COG3583	domain protein
USA300HOU_RS13535	COG1846	Transcriptional regulator
USA300HOU_RS13540	COG1846	Transcriptional regulator
USA300HOU_RS13575	COG1070	Carbohydrate kinase
USA300HOU_RS13580	COG1802	Transcriptional regulator
USA300HOU_RS13585	COG0789	Transcriptional regulator
USA300HOU_RS13590	COG2357	RelA SpoT domain protein
USA300HOU_RS13595	COG4876	unkown
USA300HOU_RS13605	COG2271	Major facilitator Superfamily
USA300HOU_RS13610	COG0586	Pfam SNARE associated Golgi protein
USA300HOU_RS13620	COG2814	Major facilitator Superfamily
USA300HOU_RS13625	COG1846	Transcriptional regulator
USA300HOU_RS13630	COG1131	(ABC) transporter
USA300HOU_RS13650	COG3949	Membrane
USA300HOU_RS13655	COG0400	carboxylic ester hydrolase activity
USA300HOU_RS13660	COG0346	lactoylglutathione lyase activity
USA300HOU_RS13665	COG1846	Transcriptional regulator
USA300HOU_RS13675	COG2514	catechol 2,3-dioxygenase activity
USA300HOU_RS13690	COG0561	phosphatase activity
USA300HOU_RS13695	COG1131	(ABC) transporter
USA300HOU_RS13705	COG3764	Sortase (surface protein transpeptidase)
USA300HOU_RS13725	COG1760	l-serine dehydratase
USA300HOU_RS13730	COG1760	l-serine dehydratase
USA300HOU_RS13745	COG0697	spore germination
USA300HOU_RS13750	COG0657	acetylesterase activity
USA300HOU_RS13770	COG0028	Belongs to the TPP enzyme family
USA300HOU_RS13785	COG0583	DNA-binding transcription factor activity
USA300HOU_RS13795	COG3942	CHAP domain
USA300HOU_RS13820	COG3425	synthase
USA300HOU_RS13825	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
USA300HOU_RS13830	COG0542	response to heat
USA300HOU_RS13850	COG2409	Drug exporters of the RND superfamily
USA300HOU_RS13895	COG0436	Aminotransferase
USA300HOU_RS13925	COG3942	CHAP domain
USA300HOU_RS13930	COG2755	lipolytic protein G-D-S-L family
USA300HOU_RS13930	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
USA300HOU_RS14035	COG3001	Fructosamine kinase
USA300HOU_RS14040	COG0167	dihydroorotate dehydrogenase activity
USA300HOU_RS14090	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
USA300HOU_RS14095	COG3527	Alpha-acetolactate decarboxylase
USA300HOU_RS14110	COG0531	amino acid
USA300HOU_RS14140	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
USA300HOU_RS14160	COG1012	belongs to the aldehyde dehydrogenase family
USA300HOU_RS14170	COG1510	regulation of RNA biosynthetic process
USA300HOU_RS14180	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
USA300HOU_RS14205	COG2851	Citrate transporter
USA300HOU_RS14220	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
USA300HOU_RS14230	COG0386	Belongs to the glutathione peroxidase family
USA300HOU_RS14255	COG1136	(ABC) transporter
USA300HOU_RS14260	COG2205	protein histidine kinase activity
USA300HOU_RS14265	COG0745	RESPONSE REGULATOR receiver
USA300HOU_RS14280	COG1785	Belongs to the alkaline phosphatase family
USA300HOU_RS14285	COG1846	Transcriptional regulator
USA300HOU_RS14330	COG1438	arginine binding
USA300HOU_RS14350	COG3711	transcriptional antiterminator
USA300HOU_RS14350	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
USA300HOU_RS14355	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
USA300HOU_RS14355	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
USA300HOU_RS14355	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
USA300HOU_RS14360	COG1482	cell wall glycoprotein biosynthetic process
USA300HOU_RS14370	COG1705	Flagellar rod assembly protein muramidase FlgJ
USA300HOU_RS14370	COG3942	CHAP domain
USA300HOU_RS14375	COG1535	isochorismatase
USA300HOU_RS14375	COG3433	isochorismatase activity
USA300HOU_RS14390	COG0438	transferase activity, transferring glycosyl groups
USA300HOU_RS14405	COG1073	alpha beta
USA300HOU_RS14425	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
USA300HOU_RS14445	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
USA300HOU_RS14500	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
USA300HOU_RS14535	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
USA300HOU_RS14620	COG0471	metal ion transport
USA300HOU_RS14625	COG2962	Rard protein
USA300HOU_RS14635	COG3376	Belongs to the NiCoT transporter (TC 2.A.52) family
USA300HOU_RS14650	COG1136	(ABC) transporter
USA300HOU_RS14655	COG0577	efflux transmembrane transporter activity
USA300HOU_RS14680	COG1278	Cold shock
USA300HOU_RS14700	COG1475	DNA binding