USA300HOU_RS00005 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain USA300HOU_RS00010 SM00480 DNA polymerase III beta subunit USA300HOU_RS00025 SM00387 Histidine kinase-like ATPases USA300HOU_RS00025 SM00433 TopoisomeraseII USA300HOU_RS00030 SM00434 DNA Topoisomerase IV USA300HOU_RS00070 SM00267 diguanylate cyclase USA300HOU_RS00085 SM00788 Adenylosuccinate synthetase USA300HOU_RS00100 SM00448 cheY-homologous receiver domain USA300HOU_RS00100 SM00862 Transcriptional regulatory protein, C terminal USA300HOU_RS00105 SM00091 PAS domain USA300HOU_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain USA300HOU_RS00105 SM00387 Histidine kinase-like ATPases USA300HOU_RS00105 SM00388 His Kinase A (phosphoacceptor) domain USA300HOU_RS00120 SM00849 Metallo-beta-lactamase superfamily USA300HOU_RS00195 SM00857 Resolvase, N terminal domain USA300HOU_RS00200 SM00857 Resolvase, N terminal domain USA300HOU_RS00225 SM00450 Rhodanese Homology Domain USA300HOU_RS00230 SM00849 Metallo-beta-lactamase superfamily USA300HOU_RS00275 SM00829 Enoylreductase USA300HOU_RS00380 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS00385 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS00435 SM00450 Rhodanese Homology Domain USA300HOU_RS00440 SM00450 Rhodanese Homology Domain USA300HOU_RS00440 SM00849 Metallo-beta-lactamase superfamily USA300HOU_RS00510 SM00148 Phospholipase C, catalytic domain (part); domain X USA300HOU_RS00535 SM00342 helix_turn_helix, arabinose operon control protein USA300HOU_RS00565 SM00345 helix_turn_helix gluconate operon transcriptional repressor USA300HOU_RS00580 SM00257 Lysin motif USA300HOU_RS00585 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS00645 SM00470 ParB-like nuclease domain USA300HOU_RS00665 SM00822 USA300HOU_RS00665 USA300HOU_RS00710 SM00345 helix_turn_helix gluconate operon transcriptional repressor USA300HOU_RS00730 SM01133 USA300HOU_RS00730 USA300HOU_RS00750 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS00755 SM00062 Bacterial periplasmic substrate-binding proteins USA300HOU_RS00870 SM00984 UDP binding domain USA300HOU_RS00910 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS00970 SM00859 Semialdehyde dehydrogenase, NAD binding domain USA300HOU_RS01030 SM00487 DEAD-like helicases superfamily USA300HOU_RS01050 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS01090 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS01135 SM00342 helix_turn_helix, arabinose operon control protein USA300HOU_RS01135 SM00448 cheY-homologous receiver domain USA300HOU_RS01210 SM00882 Coenzyme A transferase USA300HOU_RS01290 SM00829 Enoylreductase USA300HOU_RS01300 SM00829 Enoylreductase USA300HOU_RS01350 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. USA300HOU_RS01350 SM00387 Histidine kinase-like ATPases USA300HOU_RS01355 SM00448 cheY-homologous receiver domain USA300HOU_RS01355 SM00850 LytTr DNA-binding domain USA300HOU_RS01370 SM00345 helix_turn_helix gluconate operon transcriptional repressor USA300HOU_RS01370 SM00866 USA300HOU_RS01370 USA300HOU_RS01415 SM00354 helix_turn _helix lactose operon repressor USA300HOU_RS01450 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS01645 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS01675 SM01130 USA300HOU_RS01675 USA300HOU_RS01730 SM00506 Appr-1"-p processing enzyme USA300HOU_RS01770 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS01850 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS01860 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS01910 SM00470 ParB-like nuclease domain USA300HOU_RS01995 SM00855 Phosphoglycerate mutase family USA300HOU_RS02065 SM00116 Domain in cystathionine beta-synthase and other proteins. USA300HOU_RS02065 SM01240 USA300HOU_RS02065 USA300HOU_RS02265 SM00833 Cobalamin synthesis protein cobW C-terminal domain USA300HOU_RS02295 SM00014 Acid phosphatase homologues USA300HOU_RS02325 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS02325 SM00930 USA300HOU_RS02325 USA300HOU_RS02340 SM00257 Lysin motif USA300HOU_RS02395 SM00642 Alpha-amylase domain USA300HOU_RS02400 SM00345 helix_turn_helix gluconate operon transcriptional repressor USA300HOU_RS02400 SM00866 USA300HOU_RS02400 USA300HOU_RS02415 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS02425 SM00278 Helix-hairpin-helix DNA-binding motif class 1 USA300HOU_RS02425 SM00493 USA300HOU_RS02425 USA300HOU_RS02490 SM00465 GIY-YIG type nucleases (URI domain) USA300HOU_RS02515 SM00493 USA300HOU_RS02515 USA300HOU_RS02520 SM00650 Ribosomal RNA adenine dimethylases USA300HOU_RS02560 SM01400 USA300HOU_RS02560 USA300HOU_RS02580 SM00487 DEAD-like helicases superfamily USA300HOU_RS02580 SM00490 helicase superfamily c-terminal domain USA300HOU_RS02580 SM00982 USA300HOU_RS02580 USA300HOU_RS02580 SM01058 CarD-like/TRCF domain USA300HOU_RS02595 SM00363 S4 RNA-binding domain USA300HOU_RS02605 SM00316 Ribosomal protein S1-like RNA-binding domain USA300HOU_RS02610 SM00977 TilS substrate C-terminal domain USA300HOU_RS02620 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS02640 SM00905 Dihydroneopterin aldolase USA300HOU_RS02725 SM00345 helix_turn_helix gluconate operon transcriptional repressor USA300HOU_RS02760 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS02760 SM01086 C-terminal, D2-small domain, of ClpB protein USA300HOU_RS02770 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS02775 SM00670 Large family of predicted nucleotide-binding domains USA300HOU_RS02790 SM00840 USA300HOU_RS02790 USA300HOU_RS02800 SM00967 RNA 2'-O ribose methyltransferase substrate binding USA300HOU_RS02820 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. USA300HOU_RS02820 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. USA300HOU_RS02825 SM00649 Ribosomal protein L11/L12 USA300HOU_RS02855 SM00663 RNA polymerase I subunit A N-terminus USA300HOU_RS02875 SM00838 Elongation factor G C-terminus USA300HOU_RS02875 SM00889 Elongation factor G, domain IV USA300HOU_RS02990 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family USA300HOU_RS03040 SM00986 Uracil DNA glycosylase superfamily USA300HOU_RS03040 SM00987 UreE urease accessory protein, C-terminal domain USA300HOU_RS03205 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. USA300HOU_RS03215 SM00829 Enoylreductase USA300HOU_RS03230 SM00836 DALR anticodon binding domain USA300HOU_RS03230 SM01016 Arginyl tRNA synthetase N terminal dom USA300HOU_RS03235 SM00478 endonuclease III USA300HOU_RS03430 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS03435 SM00529 Helix-turn-helix diphteria tox regulatory element USA300HOU_RS03435 SM00899 USA300HOU_RS03435 USA300HOU_RS03450 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS03480 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS03500 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS03520 SM01120 USA300HOU_RS03520 USA300HOU_RS03565 SM00448 cheY-homologous receiver domain USA300HOU_RS03565 SM00862 Transcriptional regulatory protein, C terminal USA300HOU_RS03570 SM00387 Histidine kinase-like ATPases USA300HOU_RS03575 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS03595 SM00257 Lysin motif USA300HOU_RS03605 SM00342 helix_turn_helix, arabinose operon control protein USA300HOU_RS03700 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS03705 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS03710 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS03715 SM00833 Cobalamin synthesis protein cobW C-terminal domain USA300HOU_RS03770 SM00420 helix_turn_helix, Deoxyribose operon repressor USA300HOU_RS03770 SM01134 USA300HOU_RS03770 USA300HOU_RS03795 SM01091 Transporter associated domain USA300HOU_RS03810 SM00387 Histidine kinase-like ATPases USA300HOU_RS03810 SM00388 His Kinase A (phosphoacceptor) domain USA300HOU_RS03815 SM00448 cheY-homologous receiver domain USA300HOU_RS03815 SM00862 Transcriptional regulatory protein, C terminal USA300HOU_RS03870 SM00796 Allophanate hydrolase subunit 1 USA300HOU_RS03875 SM00797 Allophanate hydrolase subunit 2 USA300HOU_RS03890 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS03895 SM00341 Helicase and RNase D C-terminal USA300HOU_RS03895 SM00487 DEAD-like helicases superfamily USA300HOU_RS03895 SM00490 helicase superfamily c-terminal domain USA300HOU_RS03895 SM00956 USA300HOU_RS03895 USA300HOU_RS03900 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS03920 SM00046 Diacylglycerol kinase catalytic domain (presumed) USA300HOU_RS03980 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS04035 SM00267 diguanylate cyclase USA300HOU_RS04055 SM00487 DEAD-like helicases superfamily USA300HOU_RS04055 SM00490 helicase superfamily c-terminal domain USA300HOU_RS04070 SM00957 SecA DEAD-like domain USA300HOU_RS04070 SM00958 SecA preprotein cross-linking domain USA300HOU_RS04080 SM00937 USA300HOU_RS04080 USA300HOU_RS04090 SM00257 Lysin motif USA300HOU_RS04105 SM00487 DEAD-like helicases superfamily USA300HOU_RS04105 SM00490 helicase superfamily c-terminal domain USA300HOU_RS04130 SM00028 Tetratricopeptide repeats USA300HOU_RS04185 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain USA300HOU_RS04205 SM01192 USA300HOU_RS04205 USA300HOU_RS04205 SM01193 USA300HOU_RS04205 USA300HOU_RS04225 SM00316 Ribosomal protein S1-like RNA-binding domain USA300HOU_RS04225 SM00357 Cold shock protein domain USA300HOU_RS04225 SM00955 USA300HOU_RS04225 USA300HOU_RS04290 SM00318 Staphylococcal nuclease homologues USA300HOU_RS04295 SM00357 Cold shock protein domain USA300HOU_RS04335 SM00855 Phosphoglycerate mutase family USA300HOU_RS04395 SM00493 USA300HOU_RS04395 USA300HOU_RS04405 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS04405 SM00930 USA300HOU_RS04405 USA300HOU_RS04440 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS04445 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS04470 SM00885 D5 N terminal like USA300HOU_RS04515 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS04580 SM00729 Elongator protein 3, MiaB family, Radical SAM USA300HOU_RS04725 SM01298 USA300HOU_RS04725 USA300HOU_RS04735 SM00316 Ribosomal protein S1-like RNA-binding domain USA300HOU_RS04750 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase USA300HOU_RS04835 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS04835 SM01086 C-terminal, D2-small domain, of ClpB protein USA300HOU_RS04880 SM00825 Beta-ketoacyl synthase USA300HOU_RS04900 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS04905 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS04920 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS04925 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS04975 SM01118 USA300HOU_RS04975 USA300HOU_RS04985 SM00954 Region found in RelA / SpoT proteins USA300HOU_RS05000 SM00116 Domain in cystathionine beta-synthase and other proteins. USA300HOU_RS05000 SM00924 MgtE intracellular N domain USA300HOU_RS05065 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. USA300HOU_RS05095 SM00914 USA300HOU_RS05095 USA300HOU_RS05135 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS05230 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS05240 SM00047 Lysozyme subfamily 2 USA300HOU_RS05240 SM00644 USA300HOU_RS05240 USA300HOU_RS05300 SM01001 AIR carboxylase USA300HOU_RS05320 SM01211 USA300HOU_RS05320 USA300HOU_RS05345 SM00798 AICARFT/IMPCHase bienzyme USA300HOU_RS05345 SM00851 MGS-like domain USA300HOU_RS05350 SM01209 USA300HOU_RS05350 USA300HOU_RS05350 SM01210 USA300HOU_RS05350 USA300HOU_RS05360 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS05430 SM00849 Metallo-beta-lactamase superfamily USA300HOU_RS05460 SM00861 Transketolase, pyrimidine binding domain USA300HOU_RS05480 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS05485 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS05535 SM00838 Elongation factor G C-terminus USA300HOU_RS05560 SM00878 Biotin carboxylase C-terminal domain USA300HOU_RS05640 SM00725 NEAr Transporter domain USA300HOU_RS05645 SM00725 NEAr Transporter domain USA300HOU_RS05650 SM00725 NEAr Transporter domain USA300HOU_RS05685 SM00967 RNA 2'-O ribose methyltransferase substrate binding USA300HOU_RS05695 SM00873 B3/4 domain USA300HOU_RS05695 SM00874 tRNA synthetase B5 domain USA300HOU_RS05695 SM00896 Ferredoxin-fold anticodon binding domain USA300HOU_RS05715 SM00278 Helix-hairpin-helix DNA-binding motif class 1 USA300HOU_RS05715 SM00481 DNA polymerase alpha chain like domain USA300HOU_RS05715 SM00483 DNA polymerase X family USA300HOU_RS05720 SM00463 Small MutS-related domain USA300HOU_RS05720 SM00533 DNA-binding domain of DNA mismatch repair MUTS family USA300HOU_RS05720 SM00534 ATPase domain of DNA mismatch repair MUTS family USA300HOU_RS05735 SM00465 GIY-YIG type nucleases (URI domain) USA300HOU_RS05935 SM00740 USA300HOU_RS05935 USA300HOU_RS05955 SM00842 Cell division protein FtsA USA300HOU_RS05960 SM00864 Tubulin/FtsZ family, GTPase domain USA300HOU_RS05960 SM00865 Tubulin/FtsZ family, C-terminal domain USA300HOU_RS05985 SM00363 S4 RNA-binding domain USA300HOU_RS06015 SM00363 S4 RNA-binding domain USA300HOU_RS06040 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain USA300HOU_RS06045 SM00851 MGS-like domain USA300HOU_RS06045 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain USA300HOU_RS06045 SM01209 USA300HOU_RS06045 USA300HOU_RS06050 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family USA300HOU_RS06075 SM00072 Guanylate kinase homologues. USA300HOU_RS06080 SM01409 USA300HOU_RS06080 USA300HOU_RS06090 SM00487 DEAD-like helicases superfamily USA300HOU_RS06090 SM00490 helicase superfamily c-terminal domain USA300HOU_RS06125 SM00331 Sigma factor PP2C-like phosphatases USA300HOU_RS06125 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain USA300HOU_RS06130 SM00220 Serine/Threonine protein kinases, catalytic domain USA300HOU_RS06130 SM00740 USA300HOU_RS06130 USA300HOU_RS06145 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain USA300HOU_RS06160 SM01120 USA300HOU_RS06160 USA300HOU_RS06160 SM01121 USA300HOU_RS06160 USA300HOU_RS06165 SM00487 DEAD-like helicases superfamily USA300HOU_RS06165 SM00490 helicase superfamily c-terminal domain USA300HOU_RS06180 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. USA300HOU_RS06185 SM00822 USA300HOU_RS06185 USA300HOU_RS06200 SM00358 Double-stranded RNA binding motif USA300HOU_RS06200 SM00535 Ribonuclease III family USA300HOU_RS06205 SM00968 SMC proteins Flexible Hinge Domain USA300HOU_RS06210 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS06210 SM00962 SRP54-type protein, GTPase domain USA300HOU_RS06210 SM00963 SRP54-type protein, helical bundle domain USA300HOU_RS06220 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS06220 SM00962 SRP54-type protein, GTPase domain USA300HOU_RS06220 SM00963 SRP54-type protein, helical bundle domain USA300HOU_RS06270 SM00881 CoA binding domain USA300HOU_RS06275 SM00257 Lysin motif USA300HOU_RS06290 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain USA300HOU_RS06290 SM00437 Bacterial DNA topoisomerase I DNA-binding domain USA300HOU_RS06290 SM00493 USA300HOU_RS06290 USA300HOU_RS06310 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS06310 SM01086 C-terminal, D2-small domain, of ClpB protein USA300HOU_RS06370 SM00479 USA300HOU_RS06370 USA300HOU_RS06370 SM00481 DNA polymerase alpha chain like domain USA300HOU_RS06380 SM00316 Ribosomal protein S1-like RNA-binding domain USA300HOU_RS06380 SM00322 K homology RNA-binding domain USA300HOU_RS06410 SM00904 Riboflavin kinase USA300HOU_RS06415 SM01387 USA300HOU_RS06415 USA300HOU_RS06420 SM00316 Ribosomal protein S1-like RNA-binding domain USA300HOU_RS06420 SM00322 K homology RNA-binding domain USA300HOU_RS06425 SM00849 Metallo-beta-lactamase superfamily USA300HOU_RS06430 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS06430 SM00843 USA300HOU_RS06430 USA300HOU_RS06435 SM00345 helix_turn_helix gluconate operon transcriptional repressor USA300HOU_RS06435 SM00866 USA300HOU_RS06435 USA300HOU_RS06460 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS06470 SM00852 Probable molybdopterin binding domain USA300HOU_RS06475 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS06480 SM00322 K homology RNA-binding domain USA300HOU_RS06480 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. USA300HOU_RS06510 SM00729 Elongator protein 3, MiaB family, Radical SAM USA300HOU_RS06525 SM00533 DNA-binding domain of DNA mismatch repair MUTS family USA300HOU_RS06525 SM00534 ATPase domain of DNA mismatch repair MUTS family USA300HOU_RS06530 SM00853 MutL C terminal dimerisation domain USA300HOU_RS06530 SM01340 USA300HOU_RS06530 USA300HOU_RS06585 SM00422 helix_turn_helix, mercury resistance USA300HOU_RS06590 SM01230 USA300HOU_RS06590 USA300HOU_RS06700 SM00155 Phospholipase D. Active site motifs. USA300HOU_RS06705 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS06720 SM00421 helix_turn_helix, Lux Regulon USA300HOU_RS06720 SM00448 cheY-homologous receiver domain USA300HOU_RS06730 SM00318 Staphylococcal nuclease homologues USA300HOU_RS06785 SM01060 USA300HOU_RS06785 USA300HOU_RS06800 SM01240 USA300HOU_RS06800 USA300HOU_RS06830 SM00861 Transketolase, pyrimidine binding domain USA300HOU_RS06885 SM01207 USA300HOU_RS06885 USA300HOU_RS06890 SM00387 Histidine kinase-like ATPases USA300HOU_RS06890 SM00433 TopoisomeraseII USA300HOU_RS06895 SM00434 DNA Topoisomerase IV USA300HOU_RS06910 SM01061 CAT RNA binding domain USA300HOU_RS07015 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS07020 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS07055 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS07090 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS07100 SM00859 Semialdehyde dehydrogenase, NAD binding domain USA300HOU_RS07105 SM01130 USA300HOU_RS07105 USA300HOU_RS07125 SM01005 Alanine racemase, C-terminal domain USA300HOU_RS07140 SM00357 Cold shock protein domain USA300HOU_RS07185 SM00327 von Willebrand factor (vWF) type A domain USA300HOU_RS07210 SM00861 Transketolase, pyrimidine binding domain USA300HOU_RS07215 SM00387 Histidine kinase-like ATPases USA300HOU_RS07215 SM00388 His Kinase A (phosphoacceptor) domain USA300HOU_RS07220 SM00448 cheY-homologous receiver domain USA300HOU_RS07220 SM00862 Transcriptional regulatory protein, C terminal USA300HOU_RS07235 SM01321 USA300HOU_RS07235 USA300HOU_RS07240 SM00014 Acid phosphatase homologues USA300HOU_RS07255 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. USA300HOU_RS07255 SM00245 tail specific protease USA300HOU_RS07305 SM00567 E-Z type HEAT repeats USA300HOU_RS07305 SM00932 Scaffold protein Nfu/NifU N terminal USA300HOU_RS07310 SM00932 Scaffold protein Nfu/NifU N terminal USA300HOU_RS07340 SM00844 GA module USA300HOU_RS07360 SM01002 Alanine dehydrogenase/PNT, C-terminal domain USA300HOU_RS07360 SM01003 Alanine dehydrogenase/PNT, N-terminal domain USA300HOU_RS07365 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs USA300HOU_RS07365 SM00475 5'-3' exonuclease USA300HOU_RS07390 SM00981 USA300HOU_RS07390 USA300HOU_RS07430 SM00478 endonuclease III USA300HOU_RS07430 SM00525 USA300HOU_RS07430 USA300HOU_RS07445 SM00479 USA300HOU_RS07445 USA300HOU_RS07445 SM00491 USA300HOU_RS07445 USA300HOU_RS07480 SM00914 USA300HOU_RS07480 USA300HOU_RS07485 SM00028 Tetratricopeptide repeats USA300HOU_RS07510 SM00562 USA300HOU_RS07510 USA300HOU_RS07535 SM00411 bacterial (prokaryotic) histone like domain USA300HOU_RS07550 SM00316 Ribosomal protein S1-like RNA-binding domain USA300HOU_RS07575 SM00870 USA300HOU_RS07575 USA300HOU_RS07590 SM00257 Lysin motif USA300HOU_RS07595 SM00487 DEAD-like helicases superfamily USA300HOU_RS07595 SM00490 helicase superfamily c-terminal domain USA300HOU_RS07655 SM00287 Bacterial SH3 domain homologues USA300HOU_RS07655 SM00646 USA300HOU_RS07655 USA300HOU_RS07720 SM00635 Bacterial Ig-like domain 2 USA300HOU_RS07775 SM00507 HNH nucleases USA300HOU_RS07785 SM00487 DEAD-like helicases superfamily USA300HOU_RS07790 SM00990 USA300HOU_RS07790 USA300HOU_RS07870 SM00482 DNA polymerase A domain USA300HOU_RS07925 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS07930 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS07975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain USA300HOU_RS07975 SM00387 Histidine kinase-like ATPases USA300HOU_RS07975 SM00388 His Kinase A (phosphoacceptor) domain USA300HOU_RS07980 SM00448 cheY-homologous receiver domain USA300HOU_RS07980 SM00862 Transcriptional regulatory protein, C terminal USA300HOU_RS07985 SM00363 S4 RNA-binding domain USA300HOU_RS08050 SM00342 helix_turn_helix, arabinose operon control protein USA300HOU_RS08050 SM00871 Bacterial transcription activator, effector binding domain USA300HOU_RS08055 SM00642 Alpha-amylase domain USA300HOU_RS08060 SM00354 helix_turn _helix lactose operon repressor USA300HOU_RS08075 SM01350 USA300HOU_RS08075 USA300HOU_RS08105 SM00861 Transketolase, pyrimidine binding domain USA300HOU_RS08155 SM00878 Biotin carboxylase C-terminal domain USA300HOU_RS08165 SM00841 Elongation factor P, C-terminal USA300HOU_RS08165 SM01185 USA300HOU_RS08165 USA300HOU_RS08190 SM00450 Rhodanese Homology Domain USA300HOU_RS08250 SM00849 Metallo-beta-lactamase superfamily USA300HOU_RS08305 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS08310 SM00518 AP endonuclease family 2 USA300HOU_RS08315 SM00487 DEAD-like helicases superfamily USA300HOU_RS08315 SM00490 helicase superfamily c-terminal domain USA300HOU_RS08335 SM00400 zinc finger USA300HOU_RS08335 SM00493 USA300HOU_RS08335 USA300HOU_RS08345 SM00116 Domain in cystathionine beta-synthase and other proteins. USA300HOU_RS08405 SM00729 Elongator protein 3, MiaB family, Radical SAM USA300HOU_RS08420 SM00271 DnaJ molecular chaperone homology domain USA300HOU_RS08440 SM00729 Elongator protein 3, MiaB family, Radical SAM USA300HOU_RS08450 SM00838 Elongation factor G C-terminus USA300HOU_RS08465 SM00849 Metallo-beta-lactamase superfamily USA300HOU_RS08475 SM00278 Helix-hairpin-helix DNA-binding motif class 1 USA300HOU_RS08490 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. USA300HOU_RS08500 SM01103 USA300HOU_RS08500 USA300HOU_RS08555 SM00878 Biotin carboxylase C-terminal domain USA300HOU_RS08565 SM00797 Allophanate hydrolase subunit 2 USA300HOU_RS08570 SM00796 Allophanate hydrolase subunit 1 USA300HOU_RS08605 SM00732 Likely ribonuclease with RNase H fold. USA300HOU_RS08615 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain USA300HOU_RS08620 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS08625 SM00028 Tetratricopeptide repeats USA300HOU_RS08660 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS08685 SM00287 Bacterial SH3 domain homologues USA300HOU_RS08685 SM00646 USA300HOU_RS08685 USA300HOU_RS08695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. USA300HOU_RS08695 SM00954 Region found in RelA / SpoT proteins USA300HOU_RS08715 SM01323 USA300HOU_RS08715 USA300HOU_RS08730 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS08735 SM00278 Helix-hairpin-helix DNA-binding motif class 1 USA300HOU_RS08835 SM01004 Delta-aminolevulinic acid dehydratase USA300HOU_RS08865 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS08865 SM00994 ClpX C4-type zinc finger USA300HOU_RS08865 SM01086 C-terminal, D2-small domain, of ClpB protein USA300HOU_RS08915 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain USA300HOU_RS08940 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain USA300HOU_RS08950 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain USA300HOU_RS08950 SM01232 USA300HOU_RS08950 USA300HOU_RS08955 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs USA300HOU_RS08955 SM00474 3'-5' exonuclease USA300HOU_RS08955 SM00475 5'-3' exonuclease USA300HOU_RS08955 SM00482 DNA polymerase A domain USA300HOU_RS08965 SM00387 Histidine kinase-like ATPases USA300HOU_RS08965 SM00388 His Kinase A (phosphoacceptor) domain USA300HOU_RS08970 SM00448 cheY-homologous receiver domain USA300HOU_RS08970 SM00862 Transcriptional regulatory protein, C terminal USA300HOU_RS08980 SM01329 USA300HOU_RS08980 USA300HOU_RS09025 SM00919 Malic enzyme, NAD binding domain USA300HOU_RS09025 SM01274 USA300HOU_RS09025 USA300HOU_RS09030 SM00481 DNA polymerase alpha chain like domain USA300HOU_RS09040 SM00116 Domain in cystathionine beta-synthase and other proteins. USA300HOU_RS09050 SM00849 Metallo-beta-lactamase superfamily USA300HOU_RS09065 SM01002 Alanine dehydrogenase/PNT, C-terminal domain USA300HOU_RS09065 SM01003 Alanine dehydrogenase/PNT, N-terminal domain USA300HOU_RS09095 SM00981 USA300HOU_RS09095 USA300HOU_RS09115 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. USA300HOU_RS09120 SM00363 S4 RNA-binding domain USA300HOU_RS09120 SM01390 USA300HOU_RS09120 USA300HOU_RS09165 SM00563 Phosphate acyltransferases USA300HOU_RS09170 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. USA300HOU_RS09175 SM00363 S4 RNA-binding domain USA300HOU_RS09190 SM00725 NEAr Transporter domain USA300HOU_RS09215 SM00354 helix_turn _helix lactose operon repressor USA300HOU_RS09225 SM00830 Chorismate mutase type II USA300HOU_RS09250 SM00843 USA300HOU_RS09250 USA300HOU_RS09280 SM00849 Metallo-beta-lactamase superfamily USA300HOU_RS09310 SM00363 S4 RNA-binding domain USA300HOU_RS09330 SM00450 Rhodanese Homology Domain USA300HOU_RS09345 SM00729 Elongator protein 3, MiaB family, Radical SAM USA300HOU_RS09355 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS09410 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor USA300HOU_RS09420 SM00226 Low molecular weight phosphatase family USA300HOU_RS09425 SM00047 Lysozyme subfamily 2 USA300HOU_RS09520 SM01234 USA300HOU_RS09520 USA300HOU_RS09540 SM00894 Excalibur calcium-binding domain USA300HOU_RS09680 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS09695 SM01260 USA300HOU_RS09695 USA300HOU_RS09815 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS09840 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. USA300HOU_RS09870 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS09875 SM00421 helix_turn_helix, Lux Regulon USA300HOU_RS09875 SM00448 cheY-homologous receiver domain USA300HOU_RS09925 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS09930 SM00062 Bacterial periplasmic substrate-binding proteins USA300HOU_RS10125 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS10135 SM00478 endonuclease III USA300HOU_RS10205 SM00226 Low molecular weight phosphatase family USA300HOU_RS10220 SM00421 helix_turn_helix, Lux Regulon USA300HOU_RS10220 SM00448 cheY-homologous receiver domain USA300HOU_RS10225 SM00387 Histidine kinase-like ATPases USA300HOU_RS10285 SM00479 USA300HOU_RS10285 USA300HOU_RS10305 SM00046 Diacylglycerol kinase catalytic domain (presumed) USA300HOU_RS10315 SM00845 GatB domain USA300HOU_RS10340 SM00278 Helix-hairpin-helix DNA-binding motif class 1 USA300HOU_RS10340 SM00292 breast cancer carboxy-terminal domain USA300HOU_RS10340 SM00532 Ligase N family USA300HOU_RS10360 SM00998 Adenylosuccinate lyase C-terminus USA300HOU_RS10415 SM00710 Parallel beta-helix repeats USA300HOU_RS10425 SM01131 USA300HOU_RS10425 USA300HOU_RS10485 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS10495 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS10500 SM00345 helix_turn_helix gluconate operon transcriptional repressor USA300HOU_RS10560 SM00287 Bacterial SH3 domain homologues USA300HOU_RS10685 SM00507 HNH nucleases USA300HOU_RS10825 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS10835 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS10840 SM00479 USA300HOU_RS10840 USA300HOU_RS10930 SM00883 Chaperonin 10 Kd subunit USA300HOU_RS10960 SM00793 Accessory gene regulator B USA300HOU_RS10965 SM00794 Staphylococcal AgrD protein USA300HOU_RS10975 SM00448 cheY-homologous receiver domain USA300HOU_RS10975 SM00850 LytTr DNA-binding domain USA300HOU_RS10990 SM00640 Glycosyl hydrolases family 32 USA300HOU_RS10995 SM00354 helix_turn _helix lactose operon repressor USA300HOU_RS11015 SM00881 CoA binding domain USA300HOU_RS11020 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS11030 SM00534 ATPase domain of DNA mismatch repair MUTS family USA300HOU_RS11080 SM00917 LeuA allosteric (dimerisation) domain USA300HOU_RS11085 SM01329 USA300HOU_RS11085 USA300HOU_RS11135 SM00731 SprT homologues. USA300HOU_RS11140 SM00316 Ribosomal protein S1-like RNA-binding domain USA300HOU_RS11140 SM00732 Likely ribonuclease with RNase H fold. USA300HOU_RS11160 SM00331 Sigma factor PP2C-like phosphatases USA300HOU_RS11160 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain USA300HOU_RS11180 SM01005 Alanine racemase, C-terminal domain USA300HOU_RS11225 SM00387 Histidine kinase-like ATPases USA300HOU_RS11225 SM00388 His Kinase A (phosphoacceptor) domain USA300HOU_RS11230 SM00448 cheY-homologous receiver domain USA300HOU_RS11230 SM00862 Transcriptional regulatory protein, C terminal USA300HOU_RS11235 SM00487 DEAD-like helicases superfamily USA300HOU_RS11235 SM00490 helicase superfamily c-terminal domain USA300HOU_RS11270 SM00155 Phospholipase D. Active site motifs. USA300HOU_RS11275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. USA300HOU_RS11360 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS11420 SM00226 Low molecular weight phosphatase family USA300HOU_RS11435 SM00937 USA300HOU_RS11435 USA300HOU_RS11450 SM00357 Cold shock protein domain USA300HOU_RS11450 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS11450 SM00959 Rho termination factor, N-terminal domain USA300HOU_RS11530 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain USA300HOU_RS11540 SM01133 USA300HOU_RS11540 USA300HOU_RS11580 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor USA300HOU_RS11620 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS11850 SM00829 Enoylreductase USA300HOU_RS11855 SM00829 Enoylreductase USA300HOU_RS11880 SM01133 USA300HOU_RS11880 USA300HOU_RS11900 SM00420 helix_turn_helix, Deoxyribose operon repressor USA300HOU_RS11900 SM01134 USA300HOU_RS11900 USA300HOU_RS11930 SM00422 helix_turn_helix, mercury resistance USA300HOU_RS11985 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS12030 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS12035 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS12045 SM00662 RNA polymerases D USA300HOU_RS12065 SM00316 Ribosomal protein S1-like RNA-binding domain USA300HOU_RS12120 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. USA300HOU_RS12125 SM01374 USA300HOU_RS12125 USA300HOU_RS12145 SM00322 K homology RNA-binding domain USA300HOU_RS12160 SM01382 USA300HOU_RS12160 USA300HOU_RS12160 SM01383 USA300HOU_RS12160 USA300HOU_RS12180 SM01403 USA300HOU_RS12180 USA300HOU_RS12195 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain USA300HOU_RS12195 SM00437 Bacterial DNA topoisomerase I DNA-binding domain USA300HOU_RS12195 SM00493 USA300HOU_RS12195 USA300HOU_RS12255 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS12285 SM00729 Elongator protein 3, MiaB family, Radical SAM USA300HOU_RS12310 SM00852 Probable molybdopterin binding domain USA300HOU_RS12320 SM00852 Probable molybdopterin binding domain USA300HOU_RS12330 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS12395 SM00988 UreE urease accessory protein, N-terminal domain USA300HOU_RS12435 SM00342 helix_turn_helix, arabinose operon control protein USA300HOU_RS12485 SM00047 Lysozyme subfamily 2 USA300HOU_RS12500 SM00926 Molybdopterin oxidoreductase Fe4S4 domain USA300HOU_RS12500 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region USA300HOU_RS12515 SM00420 helix_turn_helix, Deoxyribose operon repressor USA300HOU_RS12670 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS12755 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS12770 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS12780 SM00448 cheY-homologous receiver domain USA300HOU_RS12780 SM00862 Transcriptional regulatory protein, C terminal USA300HOU_RS12785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain USA300HOU_RS12785 SM00387 Histidine kinase-like ATPases USA300HOU_RS12785 SM00388 His Kinase A (phosphoacceptor) domain USA300HOU_RS12790 SM00850 LytTr DNA-binding domain USA300HOU_RS12825 SM00829 Enoylreductase USA300HOU_RS12880 SM00342 helix_turn_helix, arabinose operon control protein USA300HOU_RS12905 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS12925 SM00422 helix_turn_helix, mercury resistance USA300HOU_RS12930 SM00421 helix_turn_helix, Lux Regulon USA300HOU_RS12930 SM00448 cheY-homologous receiver domain USA300HOU_RS12935 SM00387 Histidine kinase-like ATPases USA300HOU_RS12960 SM00926 Molybdopterin oxidoreductase Fe4S4 domain USA300HOU_RS13040 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS13050 SM00062 Bacterial periplasmic substrate-binding proteins USA300HOU_RS13050 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. USA300HOU_RS13070 SM00855 Phosphoglycerate mutase family USA300HOU_RS13125 SM00729 Elongator protein 3, MiaB family, Radical SAM USA300HOU_RS13125 SM00876 Biotin and Thiamin Synthesis associated domain USA300HOU_RS13150 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS13155 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS13190 SM00871 Bacterial transcription activator, effector binding domain USA300HOU_RS13270 SM00116 Domain in cystathionine beta-synthase and other proteins. USA300HOU_RS13270 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS13310 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS13355 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS13360 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS13490 SM00487 DEAD-like helicases superfamily USA300HOU_RS13490 SM00490 helicase superfamily c-terminal domain USA300HOU_RS13525 SM01208 USA300HOU_RS13525 USA300HOU_RS13580 SM00345 helix_turn_helix gluconate operon transcriptional repressor USA300HOU_RS13580 SM00895 USA300HOU_RS13580 USA300HOU_RS13585 SM00422 helix_turn_helix, mercury resistance USA300HOU_RS13590 SM00954 Region found in RelA / SpoT proteins USA300HOU_RS13625 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS13630 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS13665 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS13695 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS13830 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS13830 SM01086 C-terminal, D2-small domain, of ClpB protein USA300HOU_RS13845 SM00899 USA300HOU_RS13845 USA300HOU_RS13870 SM01266 USA300HOU_RS13870 USA300HOU_RS14070 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain USA300HOU_RS14255 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS14260 SM00387 Histidine kinase-like ATPases USA300HOU_RS14265 SM00448 cheY-homologous receiver domain USA300HOU_RS14265 SM00862 Transcriptional regulatory protein, C terminal USA300HOU_RS14280 SM00098 Alkaline phosphatase homologues USA300HOU_RS14285 SM00347 helix_turn_helix multiple antibiotic resistance protein USA300HOU_RS14370 SM00047 Lysozyme subfamily 2 USA300HOU_RS14395 SM00957 SecA DEAD-like domain USA300HOU_RS14395 SM00958 SecA preprotein cross-linking domain USA300HOU_RS14425 SM00903 Flavin reductase like domain USA300HOU_RS14445 SM00903 Flavin reductase like domain USA300HOU_RS14570 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS14585 SM00867 YceI-like domain USA300HOU_RS14595 SM00450 Rhodanese Homology Domain USA300HOU_RS14650 SM00382 ATPases associated with a variety of cellular activities USA300HOU_RS14680 SM00357 Cold shock protein domain USA300HOU_RS14685 SM00530 Helix-turn-helix XRE-family like proteins USA300HOU_RS14700 SM00470 ParB-like nuclease domain USA300HOU_RS14710 SM01228 USA300HOU_RS14710 USA300HOU_RS14750 SM00387 Histidine kinase-like ATPases USA300HOU_RS14895 SM00760 Bacterial dnaA protein helix-turn-helix domain