CNH35_RS00005 SM00382 ATPases associated with a variety of cellular activities CNH35_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain CNH35_RS00010 SM00480 DNA polymerase III beta subunit CNH35_RS00025 SM00387 Histidine kinase-like ATPases CNH35_RS00025 SM00433 TopoisomeraseII CNH35_RS00030 SM00434 DNA Topoisomerase IV CNH35_RS00075 SM00267 diguanylate cyclase CNH35_RS00095 SM00788 Adenylosuccinate synthetase CNH35_RS00110 SM00448 cheY-homologous receiver domain CNH35_RS00110 SM00862 Transcriptional regulatory protein, C terminal CNH35_RS00115 SM00091 PAS domain CNH35_RS00115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNH35_RS00115 SM00387 Histidine kinase-like ATPases CNH35_RS00115 SM00388 His Kinase A (phosphoacceptor) domain CNH35_RS00130 SM00849 Metallo-beta-lactamase superfamily CNH35_RS00180 SM00450 Rhodanese Homology Domain CNH35_RS00185 SM00450 Rhodanese Homology Domain CNH35_RS00185 SM00849 Metallo-beta-lactamase superfamily CNH35_RS00260 SM00148 Phospholipase C, catalytic domain (part); domain X CNH35_RS00285 SM00342 helix_turn_helix, arabinose operon control protein CNH35_RS00315 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNH35_RS00330 SM00257 Lysin motif CNH35_RS00340 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS00400 SM00470 ParB-like nuclease domain CNH35_RS00420 SM00822 CNH35_RS00420 CNH35_RS00465 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNH35_RS00485 SM01133 CNH35_RS00485 CNH35_RS00505 SM00382 ATPases associated with a variety of cellular activities CNH35_RS00510 SM00062 Bacterial periplasmic substrate-binding proteins CNH35_RS00625 SM00984 UDP binding domain CNH35_RS00665 SM00382 ATPases associated with a variety of cellular activities CNH35_RS00725 SM00859 Semialdehyde dehydrogenase, NAD binding domain CNH35_RS00785 SM00487 DEAD-like helicases superfamily CNH35_RS00805 SM00382 ATPases associated with a variety of cellular activities CNH35_RS00845 SM00382 ATPases associated with a variety of cellular activities CNH35_RS00890 SM00342 helix_turn_helix, arabinose operon control protein CNH35_RS00890 SM00448 cheY-homologous receiver domain CNH35_RS00960 SM00882 Coenzyme A transferase CNH35_RS01045 SM00829 Enoylreductase CNH35_RS01055 SM00829 Enoylreductase CNH35_RS01105 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CNH35_RS01105 SM00387 Histidine kinase-like ATPases CNH35_RS01110 SM00448 cheY-homologous receiver domain CNH35_RS01110 SM00850 LytTr DNA-binding domain CNH35_RS01125 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNH35_RS01125 SM00866 CNH35_RS01125 CNH35_RS01175 SM00354 helix_turn _helix lactose operon repressor CNH35_RS01210 SM00382 ATPases associated with a variety of cellular activities CNH35_RS01425 SM00382 ATPases associated with a variety of cellular activities CNH35_RS01460 SM01130 CNH35_RS01460 CNH35_RS01510 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS01800 SM00047 Lysozyme subfamily 2 CNH35_RS01820 SM00287 Bacterial SH3 domain homologues CNH35_RS01820 SM00646 CNH35_RS01820 CNH35_RS01860 SM00506 Appr-1"-p processing enzyme CNH35_RS01905 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS01985 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS01995 SM00382 ATPases associated with a variety of cellular activities CNH35_RS02045 SM00470 ParB-like nuclease domain CNH35_RS02135 SM00855 Phosphoglycerate mutase family CNH35_RS02210 SM00116 Domain in cystathionine beta-synthase and other proteins. CNH35_RS02210 SM01240 CNH35_RS02210 CNH35_RS02410 SM00833 Cobalamin synthesis protein cobW C-terminal domain CNH35_RS02460 SM00014 Acid phosphatase homologues CNH35_RS02505 SM00257 Lysin motif CNH35_RS02560 SM00642 Alpha-amylase domain CNH35_RS02565 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNH35_RS02565 SM00866 CNH35_RS02565 CNH35_RS02585 SM00382 ATPases associated with a variety of cellular activities CNH35_RS02595 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CNH35_RS02595 SM00493 CNH35_RS02595 CNH35_RS02660 SM00465 GIY-YIG type nucleases (URI domain) CNH35_RS02680 SM00493 CNH35_RS02680 CNH35_RS02685 SM00650 Ribosomal RNA adenine dimethylases CNH35_RS02725 SM01400 CNH35_RS02725 CNH35_RS02745 SM00487 DEAD-like helicases superfamily CNH35_RS02745 SM00490 helicase superfamily c-terminal domain CNH35_RS02745 SM00982 CNH35_RS02745 CNH35_RS02745 SM01058 CarD-like/TRCF domain CNH35_RS02760 SM00363 S4 RNA-binding domain CNH35_RS02770 SM00316 Ribosomal protein S1-like RNA-binding domain CNH35_RS02775 SM00977 TilS substrate C-terminal domain CNH35_RS02785 SM00382 ATPases associated with a variety of cellular activities CNH35_RS02805 SM00905 Dihydroneopterin aldolase CNH35_RS02890 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNH35_RS02925 SM00382 ATPases associated with a variety of cellular activities CNH35_RS02925 SM01086 C-terminal, D2-small domain, of ClpB protein CNH35_RS02930 SM00382 ATPases associated with a variety of cellular activities CNH35_RS02935 SM00670 Large family of predicted nucleotide-binding domains CNH35_RS02955 SM00840 CNH35_RS02955 CNH35_RS02960 SM00535 Ribonuclease III family CNH35_RS02965 SM00967 RNA 2'-O ribose methyltransferase substrate binding CNH35_RS02990 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CNH35_RS02990 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CNH35_RS02995 SM00649 Ribosomal protein L11/L12 CNH35_RS03030 SM00663 RNA polymerase I subunit A N-terminus CNH35_RS03050 SM00838 Elongation factor G C-terminus CNH35_RS03050 SM00889 Elongation factor G, domain IV CNH35_RS03175 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CNH35_RS03230 SM00986 Uracil DNA glycosylase superfamily CNH35_RS03230 SM00987 UreE urease accessory protein, C-terminal domain CNH35_RS03410 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNH35_RS03420 SM00829 Enoylreductase CNH35_RS03435 SM00836 DALR anticodon binding domain CNH35_RS03435 SM01016 Arginyl tRNA synthetase N terminal dom CNH35_RS03445 SM00478 endonuclease III CNH35_RS03560 SM00382 ATPases associated with a variety of cellular activities CNH35_RS03565 SM00529 Helix-turn-helix diphteria tox regulatory element CNH35_RS03565 SM00899 CNH35_RS03565 CNH35_RS03580 SM00382 ATPases associated with a variety of cellular activities CNH35_RS03610 SM00382 ATPases associated with a variety of cellular activities CNH35_RS03630 SM00382 ATPases associated with a variety of cellular activities CNH35_RS03650 SM01120 CNH35_RS03650 CNH35_RS03695 SM00448 cheY-homologous receiver domain CNH35_RS03695 SM00862 Transcriptional regulatory protein, C terminal CNH35_RS03700 SM00387 Histidine kinase-like ATPases CNH35_RS03705 SM00382 ATPases associated with a variety of cellular activities CNH35_RS03725 SM00257 Lysin motif CNH35_RS03735 SM00342 helix_turn_helix, arabinose operon control protein CNH35_RS03830 SM00382 ATPases associated with a variety of cellular activities CNH35_RS03835 SM00382 ATPases associated with a variety of cellular activities CNH35_RS03840 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS03845 SM00833 Cobalamin synthesis protein cobW C-terminal domain CNH35_RS03900 SM00420 helix_turn_helix, Deoxyribose operon repressor CNH35_RS03900 SM01134 CNH35_RS03900 CNH35_RS03920 SM01091 Transporter associated domain CNH35_RS03935 SM00387 Histidine kinase-like ATPases CNH35_RS03935 SM00388 His Kinase A (phosphoacceptor) domain CNH35_RS03940 SM00448 cheY-homologous receiver domain CNH35_RS03940 SM00862 Transcriptional regulatory protein, C terminal CNH35_RS03995 SM00796 Allophanate hydrolase subunit 1 CNH35_RS04000 SM00797 Allophanate hydrolase subunit 2 CNH35_RS04010 SM00382 ATPases associated with a variety of cellular activities CNH35_RS04015 SM00341 Helicase and RNase D C-terminal CNH35_RS04015 SM00487 DEAD-like helicases superfamily CNH35_RS04015 SM00490 helicase superfamily c-terminal domain CNH35_RS04015 SM00956 CNH35_RS04015 CNH35_RS04020 SM00382 ATPases associated with a variety of cellular activities CNH35_RS04045 SM00046 Diacylglycerol kinase catalytic domain (presumed) CNH35_RS04115 SM00382 ATPases associated with a variety of cellular activities CNH35_RS04170 SM00267 diguanylate cyclase CNH35_RS04190 SM00487 DEAD-like helicases superfamily CNH35_RS04190 SM00490 helicase superfamily c-terminal domain CNH35_RS04205 SM00957 SecA DEAD-like domain CNH35_RS04205 SM00958 SecA preprotein cross-linking domain CNH35_RS04225 SM00257 Lysin motif CNH35_RS04240 SM00487 DEAD-like helicases superfamily CNH35_RS04240 SM00490 helicase superfamily c-terminal domain CNH35_RS04265 SM00028 Tetratricopeptide repeats CNH35_RS04320 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CNH35_RS04340 SM01192 CNH35_RS04340 CNH35_RS04340 SM01193 CNH35_RS04340 CNH35_RS04360 SM00316 Ribosomal protein S1-like RNA-binding domain CNH35_RS04360 SM00357 Cold shock protein domain CNH35_RS04360 SM00955 CNH35_RS04360 CNH35_RS04430 SM00318 Staphylococcal nuclease homologues CNH35_RS04435 SM00357 Cold shock protein domain CNH35_RS04475 SM00855 Phosphoglycerate mutase family CNH35_RS04535 SM00493 CNH35_RS04535 CNH35_RS04545 SM00382 ATPases associated with a variety of cellular activities CNH35_RS04545 SM00930 CNH35_RS04545 CNH35_RS04570 SM00382 ATPases associated with a variety of cellular activities CNH35_RS04640 SM00729 Elongator protein 3, MiaB family, Radical SAM CNH35_RS04785 SM01298 CNH35_RS04785 CNH35_RS04795 SM00316 Ribosomal protein S1-like RNA-binding domain CNH35_RS04810 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CNH35_RS04895 SM00382 ATPases associated with a variety of cellular activities CNH35_RS04895 SM01086 C-terminal, D2-small domain, of ClpB protein CNH35_RS04940 SM00825 Beta-ketoacyl synthase CNH35_RS04960 SM00382 ATPases associated with a variety of cellular activities CNH35_RS04965 SM00382 ATPases associated with a variety of cellular activities CNH35_RS04980 SM00382 ATPases associated with a variety of cellular activities CNH35_RS04985 SM00382 ATPases associated with a variety of cellular activities CNH35_RS05035 SM01118 CNH35_RS05035 CNH35_RS05045 SM00954 Region found in RelA / SpoT proteins CNH35_RS05060 SM00116 Domain in cystathionine beta-synthase and other proteins. CNH35_RS05060 SM00924 MgtE intracellular N domain CNH35_RS05125 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CNH35_RS05155 SM00914 CNH35_RS05155 CNH35_RS05200 SM00382 ATPases associated with a variety of cellular activities CNH35_RS05300 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS05310 SM00047 Lysozyme subfamily 2 CNH35_RS05310 SM00644 CNH35_RS05310 CNH35_RS05370 SM01001 AIR carboxylase CNH35_RS05390 SM01211 CNH35_RS05390 CNH35_RS05415 SM00798 AICARFT/IMPCHase bienzyme CNH35_RS05415 SM00851 MGS-like domain CNH35_RS05420 SM01209 CNH35_RS05420 CNH35_RS05420 SM01210 CNH35_RS05420 CNH35_RS05430 SM00382 ATPases associated with a variety of cellular activities CNH35_RS05500 SM00849 Metallo-beta-lactamase superfamily CNH35_RS05530 SM00861 Transketolase, pyrimidine binding domain CNH35_RS05550 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS05555 SM00382 ATPases associated with a variety of cellular activities CNH35_RS05605 SM00838 Elongation factor G C-terminus CNH35_RS05630 SM00878 Biotin carboxylase C-terminal domain CNH35_RS05710 SM00857 Resolvase, N terminal domain CNH35_RS05725 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS05730 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS05735 SM01040 BRO family, N-terminal domain CNH35_RS05770 SM00382 ATPases associated with a variety of cellular activities CNH35_RS06005 SM00047 Lysozyme subfamily 2 CNH35_RS06025 SM00287 Bacterial SH3 domain homologues CNH35_RS06025 SM00644 CNH35_RS06025 CNH35_RS06030 SM00725 NEAr Transporter domain CNH35_RS06035 SM00725 NEAr Transporter domain CNH35_RS06040 SM00725 NEAr Transporter domain CNH35_RS06075 SM00967 RNA 2'-O ribose methyltransferase substrate binding CNH35_RS06085 SM00873 B3/4 domain CNH35_RS06085 SM00874 tRNA synthetase B5 domain CNH35_RS06085 SM00896 Ferredoxin-fold anticodon binding domain CNH35_RS06110 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CNH35_RS06110 SM00481 DNA polymerase alpha chain like domain CNH35_RS06110 SM00483 DNA polymerase X family CNH35_RS06115 SM00463 Small MutS-related domain CNH35_RS06115 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CNH35_RS06115 SM00534 ATPase domain of DNA mismatch repair MUTS family CNH35_RS06130 SM00465 GIY-YIG type nucleases (URI domain) CNH35_RS06325 SM00740 CNH35_RS06325 CNH35_RS06345 SM00842 Cell division protein FtsA CNH35_RS06350 SM00864 Tubulin/FtsZ family, GTPase domain CNH35_RS06350 SM00865 Tubulin/FtsZ family, C-terminal domain CNH35_RS06375 SM00363 S4 RNA-binding domain CNH35_RS06410 SM00363 S4 RNA-binding domain CNH35_RS06435 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CNH35_RS06440 SM00851 MGS-like domain CNH35_RS06440 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CNH35_RS06440 SM01209 CNH35_RS06440 CNH35_RS06445 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CNH35_RS06470 SM00072 Guanylate kinase homologues. CNH35_RS06475 SM01409 CNH35_RS06475 CNH35_RS06485 SM00487 DEAD-like helicases superfamily CNH35_RS06485 SM00490 helicase superfamily c-terminal domain CNH35_RS06520 SM00331 Sigma factor PP2C-like phosphatases CNH35_RS06520 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CNH35_RS06525 SM00220 Serine/Threonine protein kinases, catalytic domain CNH35_RS06525 SM00740 CNH35_RS06525 CNH35_RS06540 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CNH35_RS06555 SM01120 CNH35_RS06555 CNH35_RS06555 SM01121 CNH35_RS06555 CNH35_RS06560 SM00487 DEAD-like helicases superfamily CNH35_RS06560 SM00490 helicase superfamily c-terminal domain CNH35_RS06575 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CNH35_RS06580 SM00822 CNH35_RS06580 CNH35_RS06595 SM00358 Double-stranded RNA binding motif CNH35_RS06595 SM00535 Ribonuclease III family CNH35_RS06600 SM00968 SMC proteins Flexible Hinge Domain CNH35_RS06605 SM00382 ATPases associated with a variety of cellular activities CNH35_RS06605 SM00962 SRP54-type protein, GTPase domain CNH35_RS06605 SM00963 SRP54-type protein, helical bundle domain CNH35_RS06615 SM00382 ATPases associated with a variety of cellular activities CNH35_RS06615 SM00962 SRP54-type protein, GTPase domain CNH35_RS06615 SM00963 SRP54-type protein, helical bundle domain CNH35_RS06660 SM00881 CoA binding domain CNH35_RS06665 SM00257 Lysin motif CNH35_RS06680 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CNH35_RS06680 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CNH35_RS06680 SM00493 CNH35_RS06680 CNH35_RS06700 SM00382 ATPases associated with a variety of cellular activities CNH35_RS06700 SM01086 C-terminal, D2-small domain, of ClpB protein CNH35_RS06760 SM00479 CNH35_RS06760 CNH35_RS06760 SM00481 DNA polymerase alpha chain like domain CNH35_RS06775 SM00316 Ribosomal protein S1-like RNA-binding domain CNH35_RS06775 SM00322 K homology RNA-binding domain CNH35_RS06805 SM00904 Riboflavin kinase CNH35_RS06810 SM01387 CNH35_RS06810 CNH35_RS06815 SM00316 Ribosomal protein S1-like RNA-binding domain CNH35_RS06815 SM00322 K homology RNA-binding domain CNH35_RS06825 SM00849 Metallo-beta-lactamase superfamily CNH35_RS06830 SM00382 ATPases associated with a variety of cellular activities CNH35_RS06830 SM00843 CNH35_RS06830 CNH35_RS06835 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNH35_RS06835 SM00866 CNH35_RS06835 CNH35_RS06860 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS06870 SM00852 Probable molybdopterin binding domain CNH35_RS06875 SM00382 ATPases associated with a variety of cellular activities CNH35_RS06880 SM00322 K homology RNA-binding domain CNH35_RS06880 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNH35_RS06910 SM00729 Elongator protein 3, MiaB family, Radical SAM CNH35_RS06925 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CNH35_RS06925 SM00534 ATPase domain of DNA mismatch repair MUTS family CNH35_RS06930 SM00853 MutL C terminal dimerisation domain CNH35_RS06930 SM01340 CNH35_RS06930 CNH35_RS06985 SM00422 helix_turn_helix, mercury resistance CNH35_RS06990 SM01230 CNH35_RS06990 CNH35_RS07100 SM00155 Phospholipase D. Active site motifs. CNH35_RS07105 SM00382 ATPases associated with a variety of cellular activities CNH35_RS07120 SM00421 helix_turn_helix, Lux Regulon CNH35_RS07120 SM00448 cheY-homologous receiver domain CNH35_RS07130 SM00318 Staphylococcal nuclease homologues CNH35_RS07185 SM01060 CNH35_RS07185 CNH35_RS07200 SM01240 CNH35_RS07200 CNH35_RS07230 SM00861 Transketolase, pyrimidine binding domain CNH35_RS07300 SM01207 CNH35_RS07300 CNH35_RS07305 SM00387 Histidine kinase-like ATPases CNH35_RS07305 SM00433 TopoisomeraseII CNH35_RS07310 SM00434 DNA Topoisomerase IV CNH35_RS07325 SM01061 CAT RNA binding domain CNH35_RS07430 SM00382 ATPases associated with a variety of cellular activities CNH35_RS07435 SM00382 ATPases associated with a variety of cellular activities CNH35_RS07470 SM00382 ATPases associated with a variety of cellular activities CNH35_RS07500 SM00382 ATPases associated with a variety of cellular activities CNH35_RS07510 SM00859 Semialdehyde dehydrogenase, NAD binding domain CNH35_RS07515 SM01130 CNH35_RS07515 CNH35_RS07535 SM01005 Alanine racemase, C-terminal domain CNH35_RS07550 SM00357 Cold shock protein domain CNH35_RS07590 SM00327 von Willebrand factor (vWF) type A domain CNH35_RS07615 SM00861 Transketolase, pyrimidine binding domain CNH35_RS07620 SM00387 Histidine kinase-like ATPases CNH35_RS07620 SM00388 His Kinase A (phosphoacceptor) domain CNH35_RS07625 SM00448 cheY-homologous receiver domain CNH35_RS07625 SM00862 Transcriptional regulatory protein, C terminal CNH35_RS07640 SM00014 Acid phosphatase homologues CNH35_RS07655 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CNH35_RS07655 SM00245 tail specific protease CNH35_RS07700 SM00567 E-Z type HEAT repeats CNH35_RS07700 SM00932 Scaffold protein Nfu/NifU N terminal CNH35_RS07705 SM00932 Scaffold protein Nfu/NifU N terminal CNH35_RS07750 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CNH35_RS07750 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CNH35_RS07755 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CNH35_RS07755 SM00475 5'-3' exonuclease CNH35_RS07775 SM00981 CNH35_RS07775 CNH35_RS07825 SM00478 endonuclease III CNH35_RS07825 SM00525 CNH35_RS07825 CNH35_RS07840 SM00479 CNH35_RS07840 CNH35_RS07840 SM00491 CNH35_RS07840 CNH35_RS07875 SM00914 CNH35_RS07875 CNH35_RS07880 SM00028 Tetratricopeptide repeats CNH35_RS07905 SM00562 CNH35_RS07905 CNH35_RS07930 SM00411 bacterial (prokaryotic) histone like domain CNH35_RS07945 SM00316 Ribosomal protein S1-like RNA-binding domain CNH35_RS07970 SM00870 CNH35_RS07970 CNH35_RS07985 SM00257 Lysin motif CNH35_RS07990 SM00487 DEAD-like helicases superfamily CNH35_RS07990 SM00490 helicase superfamily c-terminal domain CNH35_RS08045 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNH35_RS08045 SM00387 Histidine kinase-like ATPases CNH35_RS08045 SM00388 His Kinase A (phosphoacceptor) domain CNH35_RS08050 SM00448 cheY-homologous receiver domain CNH35_RS08050 SM00862 Transcriptional regulatory protein, C terminal CNH35_RS08055 SM00363 S4 RNA-binding domain CNH35_RS08120 SM00342 helix_turn_helix, arabinose operon control protein CNH35_RS08120 SM00871 Bacterial transcription activator, effector binding domain CNH35_RS08125 SM00642 Alpha-amylase domain CNH35_RS08130 SM00354 helix_turn _helix lactose operon repressor CNH35_RS08145 SM01350 CNH35_RS08145 CNH35_RS08175 SM00861 Transketolase, pyrimidine binding domain CNH35_RS08225 SM00878 Biotin carboxylase C-terminal domain CNH35_RS08235 SM00841 Elongation factor P, C-terminal CNH35_RS08235 SM01185 CNH35_RS08235 CNH35_RS08260 SM00450 Rhodanese Homology Domain CNH35_RS08320 SM00849 Metallo-beta-lactamase superfamily CNH35_RS08375 SM00382 ATPases associated with a variety of cellular activities CNH35_RS08380 SM00518 AP endonuclease family 2 CNH35_RS08385 SM00487 DEAD-like helicases superfamily CNH35_RS08385 SM00490 helicase superfamily c-terminal domain CNH35_RS08405 SM00400 zinc finger CNH35_RS08405 SM00493 CNH35_RS08405 CNH35_RS08415 SM00116 Domain in cystathionine beta-synthase and other proteins. CNH35_RS08475 SM00729 Elongator protein 3, MiaB family, Radical SAM CNH35_RS08490 SM00271 DnaJ molecular chaperone homology domain CNH35_RS08510 SM00729 Elongator protein 3, MiaB family, Radical SAM CNH35_RS08520 SM00838 Elongation factor G C-terminus CNH35_RS08535 SM00849 Metallo-beta-lactamase superfamily CNH35_RS08545 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CNH35_RS08560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNH35_RS08570 SM01103 CNH35_RS08570 CNH35_RS08620 SM00878 Biotin carboxylase C-terminal domain CNH35_RS08630 SM00797 Allophanate hydrolase subunit 2 CNH35_RS08635 SM00796 Allophanate hydrolase subunit 1 CNH35_RS08670 SM00732 Likely ribonuclease with RNase H fold. CNH35_RS08680 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CNH35_RS08685 SM00382 ATPases associated with a variety of cellular activities CNH35_RS08690 SM00028 Tetratricopeptide repeats CNH35_RS08725 SM00382 ATPases associated with a variety of cellular activities CNH35_RS08755 SM00287 Bacterial SH3 domain homologues CNH35_RS08755 SM00646 CNH35_RS08755 CNH35_RS08765 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNH35_RS08765 SM00954 Region found in RelA / SpoT proteins CNH35_RS08785 SM01323 CNH35_RS08785 CNH35_RS08800 SM00382 ATPases associated with a variety of cellular activities CNH35_RS08805 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CNH35_RS08910 SM01004 Delta-aminolevulinic acid dehydratase CNH35_RS08940 SM00382 ATPases associated with a variety of cellular activities CNH35_RS08940 SM00994 ClpX C4-type zinc finger CNH35_RS08940 SM01086 C-terminal, D2-small domain, of ClpB protein CNH35_RS08990 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CNH35_RS09015 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CNH35_RS09025 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CNH35_RS09025 SM01232 CNH35_RS09025 CNH35_RS09030 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CNH35_RS09030 SM00474 3'-5' exonuclease CNH35_RS09030 SM00475 5'-3' exonuclease CNH35_RS09030 SM00482 DNA polymerase A domain CNH35_RS09040 SM00387 Histidine kinase-like ATPases CNH35_RS09040 SM00388 His Kinase A (phosphoacceptor) domain CNH35_RS09045 SM00448 cheY-homologous receiver domain CNH35_RS09045 SM00862 Transcriptional regulatory protein, C terminal CNH35_RS09055 SM01329 CNH35_RS09055 CNH35_RS09095 SM00919 Malic enzyme, NAD binding domain CNH35_RS09095 SM01274 CNH35_RS09095 CNH35_RS09100 SM00481 DNA polymerase alpha chain like domain CNH35_RS09115 SM00116 Domain in cystathionine beta-synthase and other proteins. CNH35_RS09125 SM00849 Metallo-beta-lactamase superfamily CNH35_RS09140 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CNH35_RS09140 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CNH35_RS09170 SM00981 CNH35_RS09170 CNH35_RS09190 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. CNH35_RS09200 SM00363 S4 RNA-binding domain CNH35_RS09200 SM01390 CNH35_RS09200 CNH35_RS09245 SM00563 Phosphate acyltransferases CNH35_RS09250 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CNH35_RS09255 SM00363 S4 RNA-binding domain CNH35_RS09270 SM00725 NEAr Transporter domain CNH35_RS09300 SM00354 helix_turn _helix lactose operon repressor CNH35_RS09310 SM00830 Chorismate mutase type II CNH35_RS09335 SM00843 CNH35_RS09335 CNH35_RS09365 SM00849 Metallo-beta-lactamase superfamily CNH35_RS09400 SM00363 S4 RNA-binding domain CNH35_RS09420 SM00450 Rhodanese Homology Domain CNH35_RS09435 SM00729 Elongator protein 3, MiaB family, Radical SAM CNH35_RS09445 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS09500 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CNH35_RS09510 SM00226 Low molecular weight phosphatase family CNH35_RS09515 SM00047 Lysozyme subfamily 2 CNH35_RS09590 SM01321 CNH35_RS09590 CNH35_RS09605 SM01234 CNH35_RS09605 CNH35_RS09775 SM00382 ATPases associated with a variety of cellular activities CNH35_RS09790 SM01260 CNH35_RS09790 CNH35_RS09925 SM00382 ATPases associated with a variety of cellular activities CNH35_RS09955 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNH35_RS09990 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS09995 SM00421 helix_turn_helix, Lux Regulon CNH35_RS09995 SM00448 cheY-homologous receiver domain CNH35_RS10050 SM00382 ATPases associated with a variety of cellular activities CNH35_RS10055 SM00062 Bacterial periplasmic substrate-binding proteins CNH35_RS10260 SM00382 ATPases associated with a variety of cellular activities CNH35_RS10270 SM00478 endonuclease III CNH35_RS10330 SM00287 Bacterial SH3 domain homologues CNH35_RS10330 SM00646 CNH35_RS10330 CNH35_RS10350 SM00047 Lysozyme subfamily 2 CNH35_RS10630 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS10635 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS10675 SM00226 Low molecular weight phosphatase family CNH35_RS10690 SM00421 helix_turn_helix, Lux Regulon CNH35_RS10690 SM00448 cheY-homologous receiver domain CNH35_RS10695 SM00387 Histidine kinase-like ATPases CNH35_RS10765 SM00479 CNH35_RS10765 CNH35_RS10785 SM00046 Diacylglycerol kinase catalytic domain (presumed) CNH35_RS10800 SM00845 GatB domain CNH35_RS10825 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CNH35_RS10825 SM00292 breast cancer carboxy-terminal domain CNH35_RS10825 SM00532 Ligase N family CNH35_RS10845 SM00998 Adenylosuccinate lyase C-terminus CNH35_RS10905 SM00710 Parallel beta-helix repeats CNH35_RS10915 SM01131 CNH35_RS10915 CNH35_RS10980 SM00382 ATPases associated with a variety of cellular activities CNH35_RS10990 SM00382 ATPases associated with a variety of cellular activities CNH35_RS10995 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNH35_RS11055 SM00287 Bacterial SH3 domain homologues CNH35_RS11135 SM00635 Bacterial Ig-like domain 2 CNH35_RS11195 SM00507 HNH nucleases CNH35_RS11340 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS11350 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS11355 SM00479 CNH35_RS11355 CNH35_RS11450 SM00883 Chaperonin 10 Kd subunit CNH35_RS11480 SM00793 Accessory gene regulator B CNH35_RS11485 SM00794 Staphylococcal AgrD protein CNH35_RS11495 SM00448 cheY-homologous receiver domain CNH35_RS11495 SM00850 LytTr DNA-binding domain CNH35_RS11510 SM00640 Glycosyl hydrolases family 32 CNH35_RS11515 SM00354 helix_turn _helix lactose operon repressor CNH35_RS11535 SM00881 CoA binding domain CNH35_RS11540 SM00382 ATPases associated with a variety of cellular activities CNH35_RS11550 SM00534 ATPase domain of DNA mismatch repair MUTS family CNH35_RS11600 SM00917 LeuA allosteric (dimerisation) domain CNH35_RS11605 SM01329 CNH35_RS11605 CNH35_RS11655 SM00731 SprT homologues. CNH35_RS11660 SM00316 Ribosomal protein S1-like RNA-binding domain CNH35_RS11660 SM00732 Likely ribonuclease with RNase H fold. CNH35_RS11680 SM00331 Sigma factor PP2C-like phosphatases CNH35_RS11680 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CNH35_RS11700 SM01005 Alanine racemase, C-terminal domain CNH35_RS11745 SM00387 Histidine kinase-like ATPases CNH35_RS11745 SM00388 His Kinase A (phosphoacceptor) domain CNH35_RS11750 SM00448 cheY-homologous receiver domain CNH35_RS11750 SM00862 Transcriptional regulatory protein, C terminal CNH35_RS11755 SM00487 DEAD-like helicases superfamily CNH35_RS11755 SM00490 helicase superfamily c-terminal domain CNH35_RS11790 SM00155 Phospholipase D. Active site motifs. CNH35_RS11795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CNH35_RS11880 SM00382 ATPases associated with a variety of cellular activities CNH35_RS11940 SM00226 Low molecular weight phosphatase family CNH35_RS11955 SM00937 CNH35_RS11955 CNH35_RS11975 SM00357 Cold shock protein domain CNH35_RS11975 SM00382 ATPases associated with a variety of cellular activities CNH35_RS11975 SM00959 Rho termination factor, N-terminal domain CNH35_RS12050 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CNH35_RS12060 SM01133 CNH35_RS12060 CNH35_RS12100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CNH35_RS12140 SM00382 ATPases associated with a variety of cellular activities CNH35_RS12370 SM00829 Enoylreductase CNH35_RS12375 SM00829 Enoylreductase CNH35_RS12400 SM01133 CNH35_RS12400 CNH35_RS12415 SM00420 helix_turn_helix, Deoxyribose operon repressor CNH35_RS12415 SM01134 CNH35_RS12415 CNH35_RS12445 SM00422 helix_turn_helix, mercury resistance CNH35_RS12500 SM00382 ATPases associated with a variety of cellular activities CNH35_RS12540 SM00382 ATPases associated with a variety of cellular activities CNH35_RS12545 SM00382 ATPases associated with a variety of cellular activities CNH35_RS12555 SM00662 RNA polymerases D CNH35_RS12575 SM00316 Ribosomal protein S1-like RNA-binding domain CNH35_RS12630 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CNH35_RS12635 SM01374 CNH35_RS12635 CNH35_RS12655 SM00322 K homology RNA-binding domain CNH35_RS12670 SM01382 CNH35_RS12670 CNH35_RS12670 SM01383 CNH35_RS12670 CNH35_RS12690 SM01403 CNH35_RS12690 CNH35_RS12705 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CNH35_RS12705 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CNH35_RS12705 SM00493 CNH35_RS12705 CNH35_RS12765 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS12800 SM00729 Elongator protein 3, MiaB family, Radical SAM CNH35_RS12825 SM00852 Probable molybdopterin binding domain CNH35_RS12835 SM00852 Probable molybdopterin binding domain CNH35_RS12845 SM00382 ATPases associated with a variety of cellular activities CNH35_RS12910 SM00988 UreE urease accessory protein, N-terminal domain CNH35_RS12950 SM00342 helix_turn_helix, arabinose operon control protein CNH35_RS13000 SM00047 Lysozyme subfamily 2 CNH35_RS13015 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CNH35_RS13015 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CNH35_RS13030 SM00420 helix_turn_helix, Deoxyribose operon repressor CNH35_RS13185 SM00382 ATPases associated with a variety of cellular activities CNH35_RS13275 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS13290 SM00382 ATPases associated with a variety of cellular activities CNH35_RS13300 SM00448 cheY-homologous receiver domain CNH35_RS13300 SM00862 Transcriptional regulatory protein, C terminal CNH35_RS13305 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CNH35_RS13305 SM00387 Histidine kinase-like ATPases CNH35_RS13305 SM00388 His Kinase A (phosphoacceptor) domain CNH35_RS13310 SM00850 LytTr DNA-binding domain CNH35_RS13345 SM00829 Enoylreductase CNH35_RS13400 SM00342 helix_turn_helix, arabinose operon control protein CNH35_RS13425 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS13450 SM00422 helix_turn_helix, mercury resistance CNH35_RS13455 SM00421 helix_turn_helix, Lux Regulon CNH35_RS13455 SM00448 cheY-homologous receiver domain CNH35_RS13460 SM00387 Histidine kinase-like ATPases CNH35_RS13485 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CNH35_RS13570 SM00382 ATPases associated with a variety of cellular activities CNH35_RS13580 SM00062 Bacterial periplasmic substrate-binding proteins CNH35_RS13580 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CNH35_RS13600 SM00855 Phosphoglycerate mutase family CNH35_RS13660 SM00729 Elongator protein 3, MiaB family, Radical SAM CNH35_RS13660 SM00876 Biotin and Thiamin Synthesis associated domain CNH35_RS13685 SM00382 ATPases associated with a variety of cellular activities CNH35_RS13690 SM00382 ATPases associated with a variety of cellular activities CNH35_RS13725 SM00871 Bacterial transcription activator, effector binding domain CNH35_RS13805 SM00116 Domain in cystathionine beta-synthase and other proteins. CNH35_RS13805 SM00382 ATPases associated with a variety of cellular activities CNH35_RS13850 SM00382 ATPases associated with a variety of cellular activities CNH35_RS13895 SM00382 ATPases associated with a variety of cellular activities CNH35_RS13900 SM00382 ATPases associated with a variety of cellular activities CNH35_RS14035 SM00487 DEAD-like helicases superfamily CNH35_RS14035 SM00490 helicase superfamily c-terminal domain CNH35_RS14075 SM01208 CNH35_RS14075 CNH35_RS14125 SM00345 helix_turn_helix gluconate operon transcriptional repressor CNH35_RS14125 SM00895 CNH35_RS14125 CNH35_RS14130 SM00422 helix_turn_helix, mercury resistance CNH35_RS14135 SM00954 Region found in RelA / SpoT proteins CNH35_RS14170 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS14185 SM00382 ATPases associated with a variety of cellular activities CNH35_RS14215 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS14245 SM00382 ATPases associated with a variety of cellular activities CNH35_RS14380 SM00382 ATPases associated with a variety of cellular activities CNH35_RS14380 SM01086 C-terminal, D2-small domain, of ClpB protein CNH35_RS14395 SM00899 CNH35_RS14395 CNH35_RS14420 SM01266 CNH35_RS14420 CNH35_RS14625 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CNH35_RS14810 SM00382 ATPases associated with a variety of cellular activities CNH35_RS14815 SM00387 Histidine kinase-like ATPases CNH35_RS14820 SM00448 cheY-homologous receiver domain CNH35_RS14820 SM00862 Transcriptional regulatory protein, C terminal CNH35_RS14830 SM00098 Alkaline phosphatase homologues CNH35_RS14840 SM00347 helix_turn_helix multiple antibiotic resistance protein CNH35_RS14925 SM00047 Lysozyme subfamily 2 CNH35_RS14950 SM00957 SecA DEAD-like domain CNH35_RS14950 SM00958 SecA preprotein cross-linking domain CNH35_RS14980 SM00903 Flavin reductase like domain CNH35_RS15000 SM00903 Flavin reductase like domain CNH35_RS15130 SM00382 ATPases associated with a variety of cellular activities CNH35_RS15145 SM00867 YceI-like domain CNH35_RS15155 SM00450 Rhodanese Homology Domain CNH35_RS15210 SM00382 ATPases associated with a variety of cellular activities CNH35_RS15245 SM00357 Cold shock protein domain CNH35_RS15250 SM00530 Helix-turn-helix XRE-family like proteins CNH35_RS15265 SM00470 ParB-like nuclease domain CNH35_RS15275 SM01228 CNH35_RS15275