JMUB0001_RS00005 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain JMUB0001_RS00010 SM00480 DNA polymerase III beta subunit JMUB0001_RS00025 SM00387 Histidine kinase-like ATPases JMUB0001_RS00025 SM00433 TopoisomeraseII JMUB0001_RS00030 SM00434 DNA Topoisomerase IV JMUB0001_RS00070 SM00267 diguanylate cyclase JMUB0001_RS00085 SM00788 Adenylosuccinate synthetase JMUB0001_RS00100 SM00448 cheY-homologous receiver domain JMUB0001_RS00100 SM00862 Transcriptional regulatory protein, C terminal JMUB0001_RS00105 SM00091 PAS domain JMUB0001_RS00105 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain JMUB0001_RS00105 SM00387 Histidine kinase-like ATPases JMUB0001_RS00105 SM00388 His Kinase A (phosphoacceptor) domain JMUB0001_RS00120 SM00849 Metallo-beta-lactamase superfamily JMUB0001_RS00145 SM00419 helix_turn_helix, cAMP Regulatory protein JMUB0001_RS00230 SM00450 Rhodanese Homology Domain JMUB0001_RS00235 SM00849 Metallo-beta-lactamase superfamily JMUB0001_RS00240 SM00450 Rhodanese Homology Domain JMUB0001_RS00275 SM00650 Ribosomal RNA adenine dimethylases JMUB0001_RS00325 SM00857 Resolvase, N terminal domain JMUB0001_RS00330 SM00857 Resolvase, N terminal domain JMUB0001_RS00385 SM00487 DEAD-like helicases superfamily JMUB0001_RS00385 SM00490 helicase superfamily c-terminal domain JMUB0001_RS00415 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS00445 SM00448 cheY-homologous receiver domain JMUB0001_RS00445 SM00862 Transcriptional regulatory protein, C terminal JMUB0001_RS00450 SM00387 Histidine kinase-like ATPases JMUB0001_RS00450 SM00388 His Kinase A (phosphoacceptor) domain JMUB0001_RS00510 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS00515 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS00550 SM00116 Domain in cystathionine beta-synthase and other proteins. JMUB0001_RS00550 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS00605 SM00849 Metallo-beta-lactamase superfamily JMUB0001_RS00635 SM00729 Elongator protein 3, MiaB family, Radical SAM JMUB0001_RS00635 SM00876 Biotin and Thiamin Synthesis associated domain JMUB0001_RS00705 SM00347 helix_turn_helix multiple antibiotic resistance protein JMUB0001_RS00765 SM00450 Rhodanese Homology Domain JMUB0001_RS00775 SM00867 YceI-like domain JMUB0001_RS00820 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS00890 SM00062 Bacterial periplasmic substrate-binding proteins JMUB0001_RS00895 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS00945 SM00957 SecA DEAD-like domain JMUB0001_RS00945 SM00958 SecA preprotein cross-linking domain JMUB0001_RS00995 SM00903 Flavin reductase like domain JMUB0001_RS01000 SM00829 Enoylreductase JMUB0001_RS01035 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS01070 SM00047 Lysozyme subfamily 2 JMUB0001_RS01200 SM00854 Bacterial capsule synthesis protein PGA_cap JMUB0001_RS01230 SM00347 helix_turn_helix multiple antibiotic resistance protein JMUB0001_RS01270 SM00098 Alkaline phosphatase homologues JMUB0001_RS01275 SM00448 cheY-homologous receiver domain JMUB0001_RS01275 SM00862 Transcriptional regulatory protein, C terminal JMUB0001_RS01280 SM00387 Histidine kinase-like ATPases JMUB0001_RS01285 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS01570 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JMUB0001_RS01745 SM01266 JMUB0001_RS01745 JMUB0001_RS01765 SM00899 JMUB0001_RS01765 JMUB0001_RS01845 SM00829 Enoylreductase JMUB0001_RS01875 SM00342 helix_turn_helix, arabinose operon control protein JMUB0001_RS01895 SM00854 Bacterial capsule synthesis protein PGA_cap JMUB0001_RS02015 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS02080 SM00954 Region found in RelA / SpoT proteins JMUB0001_RS02090 SM00345 helix_turn_helix gluconate operon transcriptional repressor JMUB0001_RS02090 SM00895 JMUB0001_RS02090 JMUB0001_RS02185 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS02215 SM00829 Enoylreductase JMUB0001_RS02220 SM00116 Domain in cystathionine beta-synthase and other proteins. JMUB0001_RS02220 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS02305 SM00871 Bacterial transcription activator, effector binding domain JMUB0001_RS02345 SM00855 Phosphoglycerate mutase family JMUB0001_RS02360 SM00062 Bacterial periplasmic substrate-binding proteins JMUB0001_RS02360 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. JMUB0001_RS02370 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS02375 SM01022 JMUB0001_RS02375 JMUB0001_RS02445 SM00926 Molybdopterin oxidoreductase Fe4S4 domain JMUB0001_RS02470 SM00387 Histidine kinase-like ATPases JMUB0001_RS02475 SM00421 helix_turn_helix, Lux Regulon JMUB0001_RS02475 SM00448 cheY-homologous receiver domain JMUB0001_RS02490 SM00347 helix_turn_helix multiple antibiotic resistance protein JMUB0001_RS02520 SM00342 helix_turn_helix, arabinose operon control protein JMUB0001_RS02575 SM00829 Enoylreductase JMUB0001_RS02640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain JMUB0001_RS02640 SM00387 Histidine kinase-like ATPases JMUB0001_RS02640 SM00388 His Kinase A (phosphoacceptor) domain JMUB0001_RS02645 SM00448 cheY-homologous receiver domain JMUB0001_RS02645 SM00862 Transcriptional regulatory protein, C terminal JMUB0001_RS02655 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS02665 SM00347 helix_turn_helix multiple antibiotic resistance protein JMUB0001_RS02755 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS02770 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS02925 SM00420 helix_turn_helix, Deoxyribose operon repressor JMUB0001_RS02940 SM00926 Molybdopterin oxidoreductase Fe4S4 domain JMUB0001_RS02940 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JMUB0001_RS02955 SM00047 Lysozyme subfamily 2 JMUB0001_RS03005 SM00342 helix_turn_helix, arabinose operon control protein JMUB0001_RS03040 SM00988 UreE urease accessory protein, N-terminal domain JMUB0001_RS03105 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS03115 SM00852 Probable molybdopterin binding domain JMUB0001_RS03125 SM00852 Probable molybdopterin binding domain JMUB0001_RS03150 SM00729 Elongator protein 3, MiaB family, Radical SAM JMUB0001_RS03165 SM00347 helix_turn_helix multiple antibiotic resistance protein JMUB0001_RS03220 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain JMUB0001_RS03220 SM00437 Bacterial DNA topoisomerase I DNA-binding domain JMUB0001_RS03220 SM00493 JMUB0001_RS03220 JMUB0001_RS03235 SM01403 JMUB0001_RS03235 JMUB0001_RS03255 SM01382 JMUB0001_RS03255 JMUB0001_RS03255 SM01383 JMUB0001_RS03255 JMUB0001_RS03270 SM00322 K homology RNA-binding domain JMUB0001_RS03290 SM01374 JMUB0001_RS03290 JMUB0001_RS03295 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. JMUB0001_RS03350 SM00316 Ribosomal protein S1-like RNA-binding domain JMUB0001_RS03370 SM00662 RNA polymerases D JMUB0001_RS03380 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS03385 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS03415 SM00420 helix_turn_helix, Deoxyribose operon repressor JMUB0001_RS03415 SM01134 JMUB0001_RS03415 JMUB0001_RS03435 SM01133 JMUB0001_RS03435 JMUB0001_RS03465 SM00829 Enoylreductase JMUB0001_RS03690 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor JMUB0001_RS03730 SM01133 JMUB0001_RS03730 JMUB0001_RS03735 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain JMUB0001_RS03820 SM00357 Cold shock protein domain JMUB0001_RS03820 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS03820 SM00959 Rho termination factor, N-terminal domain JMUB0001_RS03835 SM00937 JMUB0001_RS03835 JMUB0001_RS03850 SM00226 Low molecular weight phosphatase family JMUB0001_RS03910 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS03975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. JMUB0001_RS03980 SM00155 Phospholipase D. Active site motifs. JMUB0001_RS04015 SM00487 DEAD-like helicases superfamily JMUB0001_RS04015 SM00490 helicase superfamily c-terminal domain JMUB0001_RS04040 SM01005 Alanine racemase, C-terminal domain JMUB0001_RS04055 SM00331 Sigma factor PP2C-like phosphatases JMUB0001_RS04055 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain JMUB0001_RS04075 SM00316 Ribosomal protein S1-like RNA-binding domain JMUB0001_RS04075 SM00732 Likely ribonuclease with RNase H fold. JMUB0001_RS04080 SM00731 SprT homologues. JMUB0001_RS04125 SM01329 JMUB0001_RS04125 JMUB0001_RS04175 SM00534 ATPase domain of DNA mismatch repair MUTS family JMUB0001_RS04180 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS04185 SM00881 CoA binding domain JMUB0001_RS04210 SM00354 helix_turn _helix lactose operon repressor JMUB0001_RS04215 SM00640 Glycosyl hydrolases family 32 JMUB0001_RS04225 SM00448 cheY-homologous receiver domain JMUB0001_RS04225 SM00850 LytTr DNA-binding domain JMUB0001_RS04235 SM00794 Staphylococcal AgrD protein JMUB0001_RS04240 SM00793 Accessory gene regulator B JMUB0001_RS04265 SM00883 Chaperonin 10 Kd subunit JMUB0001_RS04300 SM00345 helix_turn_helix gluconate operon transcriptional repressor JMUB0001_RS04305 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS04315 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS04375 SM01131 JMUB0001_RS04375 JMUB0001_RS04385 SM00710 Parallel beta-helix repeats JMUB0001_RS04420 SM00998 Adenylosuccinate lyase C-terminus JMUB0001_RS04440 SM00278 Helix-hairpin-helix DNA-binding motif class 1 JMUB0001_RS04440 SM00292 breast cancer carboxy-terminal domain JMUB0001_RS04440 SM00532 Ligase N family JMUB0001_RS04465 SM00845 GatB domain JMUB0001_RS04470 SM00046 Diacylglycerol kinase catalytic domain (presumed) JMUB0001_RS04490 SM00479 JMUB0001_RS04490 JMUB0001_RS04535 SM00387 Histidine kinase-like ATPases JMUB0001_RS04540 SM00421 helix_turn_helix, Lux Regulon JMUB0001_RS04540 SM00448 cheY-homologous receiver domain JMUB0001_RS04555 SM00226 Low molecular weight phosphatase family JMUB0001_RS04620 SM00478 endonuclease III JMUB0001_RS04630 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS04825 SM00062 Bacterial periplasmic substrate-binding proteins JMUB0001_RS04825 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. JMUB0001_RS04830 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS04875 SM00421 helix_turn_helix, Lux Regulon JMUB0001_RS04875 SM00448 cheY-homologous receiver domain JMUB0001_RS04880 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS04905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. JMUB0001_RS04935 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS05020 SM01234 JMUB0001_RS05020 JMUB0001_RS05095 SM00047 Lysozyme subfamily 2 JMUB0001_RS05145 SM00729 Elongator protein 3, MiaB family, Radical SAM JMUB0001_RS05160 SM00450 Rhodanese Homology Domain JMUB0001_RS05180 SM00363 S4 RNA-binding domain JMUB0001_RS05210 SM00849 Metallo-beta-lactamase superfamily JMUB0001_RS05240 SM00843 JMUB0001_RS05240 JMUB0001_RS05260 SM00830 Chorismate mutase type II JMUB0001_RS05265 SM00354 helix_turn _helix lactose operon repressor JMUB0001_RS05295 SM00363 S4 RNA-binding domain JMUB0001_RS05300 SM00347 helix_turn_helix multiple antibiotic resistance protein JMUB0001_RS05315 SM00563 Phosphate acyltransferases JMUB0001_RS05350 SM00363 S4 RNA-binding domain JMUB0001_RS05350 SM01390 JMUB0001_RS05350 JMUB0001_RS05360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. JMUB0001_RS05375 SM00981 JMUB0001_RS05375 JMUB0001_RS05405 SM01002 Alanine dehydrogenase/PNT, C-terminal domain JMUB0001_RS05405 SM01003 Alanine dehydrogenase/PNT, N-terminal domain JMUB0001_RS05415 SM00849 Metallo-beta-lactamase superfamily JMUB0001_RS05425 SM00116 Domain in cystathionine beta-synthase and other proteins. JMUB0001_RS05435 SM00481 DNA polymerase alpha chain like domain JMUB0001_RS05440 SM00919 Malic enzyme, NAD binding domain JMUB0001_RS05440 SM01274 JMUB0001_RS05440 JMUB0001_RS05475 SM01329 JMUB0001_RS05475 JMUB0001_RS05480 SM00448 cheY-homologous receiver domain JMUB0001_RS05480 SM00862 Transcriptional regulatory protein, C terminal JMUB0001_RS05485 SM00387 Histidine kinase-like ATPases JMUB0001_RS05485 SM00388 His Kinase A (phosphoacceptor) domain JMUB0001_RS05490 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs JMUB0001_RS05490 SM00475 5'-3' exonuclease JMUB0001_RS05490 SM00482 DNA polymerase A domain JMUB0001_RS05495 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain JMUB0001_RS05495 SM01232 JMUB0001_RS05495 JMUB0001_RS05505 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JMUB0001_RS05525 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain JMUB0001_RS05565 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS05565 SM00994 ClpX C4-type zinc finger JMUB0001_RS05565 SM01086 C-terminal, D2-small domain, of ClpB protein JMUB0001_RS05595 SM01004 Delta-aminolevulinic acid dehydratase JMUB0001_RS05655 SM00650 Ribosomal RNA adenine dimethylases JMUB0001_RS05735 SM00278 Helix-hairpin-helix DNA-binding motif class 1 JMUB0001_RS05740 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS05755 SM01323 JMUB0001_RS05755 JMUB0001_RS05775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. JMUB0001_RS05775 SM00954 Region found in RelA / SpoT proteins JMUB0001_RS05785 SM00287 Bacterial SH3 domain homologues JMUB0001_RS05785 SM00646 JMUB0001_RS05785 JMUB0001_RS05810 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS05840 SM00028 Tetratricopeptide repeats JMUB0001_RS05845 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS05850 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain JMUB0001_RS05860 SM00732 Likely ribonuclease with RNase H fold. JMUB0001_RS05895 SM00796 Allophanate hydrolase subunit 1 JMUB0001_RS05900 SM00797 Allophanate hydrolase subunit 2 JMUB0001_RS05910 SM00878 Biotin carboxylase C-terminal domain JMUB0001_RS05945 SM01103 JMUB0001_RS05945 JMUB0001_RS05955 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. JMUB0001_RS05970 SM00278 Helix-hairpin-helix DNA-binding motif class 1 JMUB0001_RS05995 SM00838 Elongation factor G C-terminus JMUB0001_RS06000 SM00729 Elongator protein 3, MiaB family, Radical SAM JMUB0001_RS06020 SM00271 DnaJ molecular chaperone homology domain JMUB0001_RS06035 SM00729 Elongator protein 3, MiaB family, Radical SAM JMUB0001_RS06105 SM00400 zinc finger JMUB0001_RS06105 SM00493 JMUB0001_RS06105 JMUB0001_RS06125 SM00487 DEAD-like helicases superfamily JMUB0001_RS06125 SM00490 helicase superfamily c-terminal domain JMUB0001_RS06130 SM00518 AP endonuclease family 2 JMUB0001_RS06135 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS06190 SM00849 Metallo-beta-lactamase superfamily JMUB0001_RS06250 SM00450 Rhodanese Homology Domain JMUB0001_RS06275 SM00841 Elongation factor P, C-terminal JMUB0001_RS06275 SM01185 JMUB0001_RS06275 JMUB0001_RS06285 SM00878 Biotin carboxylase C-terminal domain JMUB0001_RS06335 SM00861 Transketolase, pyrimidine binding domain JMUB0001_RS06360 SM01350 JMUB0001_RS06360 JMUB0001_RS06365 SM00642 Alpha-amylase domain JMUB0001_RS06370 SM00342 helix_turn_helix, arabinose operon control protein JMUB0001_RS06370 SM00871 Bacterial transcription activator, effector binding domain JMUB0001_RS06435 SM00363 S4 RNA-binding domain JMUB0001_RS06440 SM00448 cheY-homologous receiver domain JMUB0001_RS06440 SM00862 Transcriptional regulatory protein, C terminal JMUB0001_RS06445 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain JMUB0001_RS06445 SM00387 Histidine kinase-like ATPases JMUB0001_RS06445 SM00388 His Kinase A (phosphoacceptor) domain JMUB0001_RS06465 SM00487 DEAD-like helicases superfamily JMUB0001_RS06465 SM00490 helicase superfamily c-terminal domain JMUB0001_RS06470 SM00257 Lysin motif JMUB0001_RS06480 SM00870 JMUB0001_RS06480 JMUB0001_RS06490 SM00316 Ribosomal protein S1-like RNA-binding domain JMUB0001_RS06505 SM00411 bacterial (prokaryotic) histone like domain JMUB0001_RS06525 SM00562 JMUB0001_RS06525 JMUB0001_RS06545 SM00028 Tetratricopeptide repeats JMUB0001_RS06550 SM00914 JMUB0001_RS06550 JMUB0001_RS06585 SM00479 JMUB0001_RS06585 JMUB0001_RS06585 SM00491 JMUB0001_RS06585 JMUB0001_RS06600 SM00478 endonuclease III JMUB0001_RS06600 SM00525 JMUB0001_RS06600 JMUB0001_RS06640 SM00981 JMUB0001_RS06640 JMUB0001_RS06655 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs JMUB0001_RS06655 SM00475 5'-3' exonuclease JMUB0001_RS06680 SM00932 Scaffold protein Nfu/NifU N terminal JMUB0001_RS06685 SM00567 E-Z type HEAT repeats JMUB0001_RS06685 SM00932 Scaffold protein Nfu/NifU N terminal JMUB0001_RS06730 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. JMUB0001_RS06730 SM00245 tail specific protease JMUB0001_RS06745 SM00014 Acid phosphatase homologues JMUB0001_RS06750 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS06780 SM00420 helix_turn_helix, Deoxyribose operon repressor JMUB0001_RS06780 SM01134 JMUB0001_RS06780 JMUB0001_RS06785 SM00448 cheY-homologous receiver domain JMUB0001_RS06785 SM00862 Transcriptional regulatory protein, C terminal JMUB0001_RS06790 SM00387 Histidine kinase-like ATPases JMUB0001_RS06790 SM00388 His Kinase A (phosphoacceptor) domain JMUB0001_RS06800 SM00861 Transketolase, pyrimidine binding domain JMUB0001_RS06815 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS06840 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS06845 SM00327 von Willebrand factor (vWF) type A domain JMUB0001_RS06875 SM00357 Cold shock protein domain JMUB0001_RS06900 SM01005 Alanine racemase, C-terminal domain JMUB0001_RS06920 SM01130 JMUB0001_RS06920 JMUB0001_RS06925 SM00859 Semialdehyde dehydrogenase, NAD binding domain JMUB0001_RS06935 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS06960 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS06990 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS06995 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS07095 SM01061 CAT RNA binding domain JMUB0001_RS07105 SM00434 DNA Topoisomerase IV JMUB0001_RS07110 SM00387 Histidine kinase-like ATPases JMUB0001_RS07110 SM00433 TopoisomeraseII JMUB0001_RS07115 SM01207 JMUB0001_RS07115 JMUB0001_RS07190 SM00861 Transketolase, pyrimidine binding domain JMUB0001_RS07215 SM01240 JMUB0001_RS07215 JMUB0001_RS07230 SM01060 JMUB0001_RS07230 JMUB0001_RS07280 SM00318 Staphylococcal nuclease homologues JMUB0001_RS07295 SM00421 helix_turn_helix, Lux Regulon JMUB0001_RS07295 SM00448 cheY-homologous receiver domain JMUB0001_RS07300 SM00387 Histidine kinase-like ATPases JMUB0001_RS07310 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS07315 SM00155 Phospholipase D. Active site motifs. JMUB0001_RS07360 SM01230 JMUB0001_RS07360 JMUB0001_RS07365 SM00422 helix_turn_helix, mercury resistance JMUB0001_RS07420 SM00853 MutL C terminal dimerisation domain JMUB0001_RS07420 SM01340 JMUB0001_RS07420 JMUB0001_RS07425 SM00533 DNA-binding domain of DNA mismatch repair MUTS family JMUB0001_RS07425 SM00534 ATPase domain of DNA mismatch repair MUTS family JMUB0001_RS07440 SM00729 Elongator protein 3, MiaB family, Radical SAM JMUB0001_RS07475 SM00322 K homology RNA-binding domain JMUB0001_RS07475 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. JMUB0001_RS07480 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS07485 SM00852 Probable molybdopterin binding domain JMUB0001_RS07495 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS07520 SM00866 JMUB0001_RS07520 JMUB0001_RS07525 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS07525 SM00843 JMUB0001_RS07525 JMUB0001_RS07530 SM00849 Metallo-beta-lactamase superfamily JMUB0001_RS07535 SM00316 Ribosomal protein S1-like RNA-binding domain JMUB0001_RS07535 SM00322 K homology RNA-binding domain JMUB0001_RS07540 SM01387 JMUB0001_RS07540 JMUB0001_RS07545 SM00904 Riboflavin kinase JMUB0001_RS07575 SM00316 Ribosomal protein S1-like RNA-binding domain JMUB0001_RS07575 SM00322 K homology RNA-binding domain JMUB0001_RS07585 SM00479 JMUB0001_RS07585 JMUB0001_RS07585 SM00481 DNA polymerase alpha chain like domain JMUB0001_RS07595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. JMUB0001_RS07635 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS07635 SM01086 C-terminal, D2-small domain, of ClpB protein JMUB0001_RS07655 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain JMUB0001_RS07655 SM00437 Bacterial DNA topoisomerase I DNA-binding domain JMUB0001_RS07655 SM00493 JMUB0001_RS07655 JMUB0001_RS07665 SM00881 CoA binding domain JMUB0001_RS07725 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS07725 SM00962 SRP54-type protein, GTPase domain JMUB0001_RS07725 SM00963 SRP54-type protein, helical bundle domain JMUB0001_RS07735 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS07735 SM00962 SRP54-type protein, GTPase domain JMUB0001_RS07735 SM00963 SRP54-type protein, helical bundle domain JMUB0001_RS07740 SM00968 SMC proteins Flexible Hinge Domain JMUB0001_RS07745 SM00358 Double-stranded RNA binding motif JMUB0001_RS07745 SM00535 Ribonuclease III family JMUB0001_RS07755 SM00822 JMUB0001_RS07755 JMUB0001_RS07760 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. JMUB0001_RS07775 SM00487 DEAD-like helicases superfamily JMUB0001_RS07775 SM00490 helicase superfamily c-terminal domain JMUB0001_RS07780 SM00318 Staphylococcal nuclease homologues JMUB0001_RS07780 SM00894 Excalibur calcium-binding domain JMUB0001_RS07785 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JMUB0001_RS07790 SM01120 JMUB0001_RS07790 JMUB0001_RS07790 SM01121 JMUB0001_RS07790 JMUB0001_RS07805 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain JMUB0001_RS07825 SM00220 Serine/Threonine protein kinases, catalytic domain JMUB0001_RS07825 SM00740 JMUB0001_RS07825 JMUB0001_RS07830 SM00331 Sigma factor PP2C-like phosphatases JMUB0001_RS07830 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain JMUB0001_RS07860 SM00487 DEAD-like helicases superfamily JMUB0001_RS07860 SM00490 helicase superfamily c-terminal domain JMUB0001_RS07870 SM01409 JMUB0001_RS07870 JMUB0001_RS07875 SM00072 Guanylate kinase homologues. JMUB0001_RS07900 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family JMUB0001_RS07905 SM00851 MGS-like domain JMUB0001_RS07905 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JMUB0001_RS07905 SM01209 JMUB0001_RS07905 JMUB0001_RS07910 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain JMUB0001_RS07935 SM00363 S4 RNA-binding domain JMUB0001_RS07960 SM00363 S4 RNA-binding domain JMUB0001_RS07985 SM00864 Tubulin/FtsZ family, GTPase domain JMUB0001_RS07985 SM00865 Tubulin/FtsZ family, C-terminal domain JMUB0001_RS07990 SM00842 Cell division protein FtsA JMUB0001_RS08010 SM00740 JMUB0001_RS08010 JMUB0001_RS08075 SM00646 JMUB0001_RS08075 JMUB0001_RS08200 SM00507 HNH nucleases JMUB0001_RS08295 SM00507 HNH nucleases JMUB0001_RS08300 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS08305 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS08315 SM00507 HNH nucleases JMUB0001_RS08360 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS08365 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS08420 SM00465 GIY-YIG type nucleases (URI domain) JMUB0001_RS08430 SM00463 Small MutS-related domain JMUB0001_RS08430 SM00533 DNA-binding domain of DNA mismatch repair MUTS family JMUB0001_RS08430 SM00534 ATPase domain of DNA mismatch repair MUTS family JMUB0001_RS08435 SM00278 Helix-hairpin-helix DNA-binding motif class 1 JMUB0001_RS08435 SM00481 DNA polymerase alpha chain like domain JMUB0001_RS08435 SM00483 DNA polymerase X family JMUB0001_RS08455 SM00873 B3/4 domain JMUB0001_RS08455 SM00874 tRNA synthetase B5 domain JMUB0001_RS08455 SM00896 Ferredoxin-fold anticodon binding domain JMUB0001_RS08465 SM00967 RNA 2'-O ribose methyltransferase substrate binding JMUB0001_RS08480 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS08495 SM00725 NEAr Transporter domain JMUB0001_RS08500 SM00725 NEAr Transporter domain JMUB0001_RS08510 SM00725 NEAr Transporter domain JMUB0001_RS08515 SM00725 NEAr Transporter domain JMUB0001_RS08590 SM00878 Biotin carboxylase C-terminal domain JMUB0001_RS08615 SM00838 Elongation factor G C-terminus JMUB0001_RS08665 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS08670 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS08690 SM00861 Transketolase, pyrimidine binding domain JMUB0001_RS08715 SM00849 Metallo-beta-lactamase superfamily JMUB0001_RS08780 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS08790 SM01209 JMUB0001_RS08790 JMUB0001_RS08790 SM01210 JMUB0001_RS08790 JMUB0001_RS08795 SM00798 AICARFT/IMPCHase bienzyme JMUB0001_RS08795 SM00851 MGS-like domain JMUB0001_RS08820 SM01211 JMUB0001_RS08820 JMUB0001_RS08840 SM01001 AIR carboxylase JMUB0001_RS08910 SM00047 Lysozyme subfamily 2 JMUB0001_RS08910 SM00644 JMUB0001_RS08910 JMUB0001_RS08915 SM00347 helix_turn_helix multiple antibiotic resistance protein JMUB0001_RS08960 SM00862 Transcriptional regulatory protein, C terminal JMUB0001_RS08965 SM01260 JMUB0001_RS08965 JMUB0001_RS09015 SM00914 JMUB0001_RS09015 JMUB0001_RS09045 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. JMUB0001_RS09105 SM00116 Domain in cystathionine beta-synthase and other proteins. JMUB0001_RS09105 SM00924 MgtE intracellular N domain JMUB0001_RS09120 SM00954 Region found in RelA / SpoT proteins JMUB0001_RS09130 SM01118 JMUB0001_RS09130 JMUB0001_RS09180 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS09185 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS09195 SM00825 Beta-ketoacyl synthase JMUB0001_RS09215 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS09215 SM01086 C-terminal, D2-small domain, of ClpB protein JMUB0001_RS09295 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JMUB0001_RS09310 SM00316 Ribosomal protein S1-like RNA-binding domain JMUB0001_RS09320 SM01298 JMUB0001_RS09320 JMUB0001_RS09460 SM00729 Elongator protein 3, MiaB family, Radical SAM JMUB0001_RS09510 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS09540 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS09540 SM00930 JMUB0001_RS09540 JMUB0001_RS09550 SM00493 JMUB0001_RS09550 JMUB0001_RS09595 SM00855 Phosphoglycerate mutase family JMUB0001_RS09660 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS09705 SM00889 Elongation factor G, domain IV JMUB0001_RS09715 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS09765 SM00357 Cold shock protein domain JMUB0001_RS09795 SM00316 Ribosomal protein S1-like RNA-binding domain JMUB0001_RS09795 SM00357 Cold shock protein domain JMUB0001_RS09795 SM00955 JMUB0001_RS09795 JMUB0001_RS09815 SM01192 JMUB0001_RS09815 JMUB0001_RS09815 SM01193 JMUB0001_RS09815 JMUB0001_RS09835 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JMUB0001_RS09895 SM00028 Tetratricopeptide repeats JMUB0001_RS09920 SM00487 DEAD-like helicases superfamily JMUB0001_RS09920 SM00490 helicase superfamily c-terminal domain JMUB0001_RS09935 SM00257 Lysin motif JMUB0001_RS09945 SM00957 SecA DEAD-like domain JMUB0001_RS09945 SM00958 SecA preprotein cross-linking domain JMUB0001_RS09950 SM00644 JMUB0001_RS09950 JMUB0001_RS09965 SM00487 DEAD-like helicases superfamily JMUB0001_RS09965 SM00490 helicase superfamily c-terminal domain JMUB0001_RS09985 SM00267 diguanylate cyclase JMUB0001_RS10065 SM00046 Diacylglycerol kinase catalytic domain (presumed) JMUB0001_RS10085 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS10090 SM00341 Helicase and RNase D C-terminal JMUB0001_RS10090 SM00487 DEAD-like helicases superfamily JMUB0001_RS10090 SM00490 helicase superfamily c-terminal domain JMUB0001_RS10090 SM00956 JMUB0001_RS10090 JMUB0001_RS10095 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS10110 SM00797 Allophanate hydrolase subunit 2 JMUB0001_RS10115 SM00796 Allophanate hydrolase subunit 1 JMUB0001_RS10170 SM00448 cheY-homologous receiver domain JMUB0001_RS10170 SM00862 Transcriptional regulatory protein, C terminal JMUB0001_RS10175 SM00387 Histidine kinase-like ATPases JMUB0001_RS10175 SM00388 His Kinase A (phosphoacceptor) domain JMUB0001_RS10190 SM01091 Transporter associated domain JMUB0001_RS10210 SM00420 helix_turn_helix, Deoxyribose operon repressor JMUB0001_RS10210 SM01134 JMUB0001_RS10210 JMUB0001_RS10260 SM00833 Cobalamin synthesis protein cobW C-terminal domain JMUB0001_RS10265 SM00347 helix_turn_helix multiple antibiotic resistance protein JMUB0001_RS10270 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS10275 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS10365 SM00342 helix_turn_helix, arabinose operon control protein JMUB0001_RS10375 SM00257 Lysin motif JMUB0001_RS10395 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS10400 SM00387 Histidine kinase-like ATPases JMUB0001_RS10405 SM00448 cheY-homologous receiver domain JMUB0001_RS10405 SM00862 Transcriptional regulatory protein, C terminal JMUB0001_RS10440 SM01120 JMUB0001_RS10440 JMUB0001_RS10460 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS10475 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS10500 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS10525 SM00529 Helix-turn-helix diphteria tox regulatory element JMUB0001_RS10525 SM00899 JMUB0001_RS10525 JMUB0001_RS10530 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS10610 SM00347 helix_turn_helix multiple antibiotic resistance protein JMUB0001_RS10660 SM00422 helix_turn_helix, mercury resistance JMUB0001_RS10665 SM00478 endonuclease III JMUB0001_RS10670 SM00836 DALR anticodon binding domain JMUB0001_RS10670 SM01016 Arginyl tRNA synthetase N terminal dom JMUB0001_RS10700 SM01001 AIR carboxylase JMUB0001_RS10720 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. JMUB0001_RS10810 SM00986 Uracil DNA glycosylase superfamily JMUB0001_RS10810 SM00987 UreE urease accessory protein, C-terminal domain JMUB0001_RS10870 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family JMUB0001_RS10990 SM00838 Elongation factor G C-terminus JMUB0001_RS10990 SM00889 Elongation factor G, domain IV JMUB0001_RS11010 SM00663 RNA polymerase I subunit A N-terminus JMUB0001_RS11045 SM00649 Ribosomal protein L11/L12 JMUB0001_RS11050 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. JMUB0001_RS11050 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. JMUB0001_RS11075 SM00967 RNA 2'-O ribose methyltransferase substrate binding JMUB0001_RS11080 SM00535 Ribonuclease III family JMUB0001_RS11085 SM00840 JMUB0001_RS11085 JMUB0001_RS11100 SM00670 Large family of predicted nucleotide-binding domains JMUB0001_RS11105 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS11110 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS11110 SM01086 C-terminal, D2-small domain, of ClpB protein JMUB0001_RS11145 SM00345 helix_turn_helix gluconate operon transcriptional repressor JMUB0001_RS11220 SM00905 Dihydroneopterin aldolase JMUB0001_RS11240 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS11250 SM00977 TilS substrate C-terminal domain JMUB0001_RS11255 SM00316 Ribosomal protein S1-like RNA-binding domain JMUB0001_RS11265 SM00363 S4 RNA-binding domain JMUB0001_RS11280 SM00487 DEAD-like helicases superfamily JMUB0001_RS11280 SM00490 helicase superfamily c-terminal domain JMUB0001_RS11280 SM00982 JMUB0001_RS11280 JMUB0001_RS11280 SM01058 CarD-like/TRCF domain JMUB0001_RS11295 SM01400 JMUB0001_RS11295 JMUB0001_RS11330 SM00650 Ribosomal RNA adenine dimethylases JMUB0001_RS11335 SM00493 JMUB0001_RS11335 JMUB0001_RS11355 SM00465 GIY-YIG type nucleases (URI domain) JMUB0001_RS11415 SM00278 Helix-hairpin-helix DNA-binding motif class 1 JMUB0001_RS11415 SM00493 JMUB0001_RS11415 JMUB0001_RS11425 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS11490 SM00257 Lysin motif JMUB0001_RS11505 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS11505 SM00930 JMUB0001_RS11505 JMUB0001_RS11555 SM00014 Acid phosphatase homologues JMUB0001_RS11600 SM00833 Cobalamin synthesis protein cobW C-terminal domain JMUB0001_RS11715 SM00942 Primase C terminal 1 (PriCT-1) JMUB0001_RS11735 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS11740 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS11745 SM00974 JMUB0001_RS11745 JMUB0001_RS11760 SM00116 Domain in cystathionine beta-synthase and other proteins. JMUB0001_RS11760 SM01240 JMUB0001_RS11760 JMUB0001_RS11825 SM00855 Phosphoglycerate mutase family JMUB0001_RS11955 SM00470 ParB-like nuclease domain JMUB0001_RS11990 SM00882 Coenzyme A transferase JMUB0001_RS11995 SM00882 Coenzyme A transferase JMUB0001_RS12020 SM00530 Helix-turn-helix XRE-family like proteins JMUB0001_RS12030 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS12075 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS12115 SM00382 ATPases associated with a variety of cellular activities JMUB0001_RS12165 SM00470 ParB-like nuclease domain JMUB0001_RS12175 SM01228 JMUB0001_RS12175