BEK99_RS00065 SM01060 BEK99_RS00065 BEK99_RS00140 SM00957 SecA DEAD-like domain BEK99_RS00140 SM00958 SecA preprotein cross-linking domain BEK99_RS00155 SM00478 endonuclease III BEK99_RS00160 SM01009 AlkA N-terminal domain BEK99_RS00170 SM01208 BEK99_RS00170 BEK99_RS00190 SM00382 ATPases associated with a variety of cellular activities BEK99_RS00190 SM00930 BEK99_RS00190 BEK99_RS00215 SM00342 helix_turn_helix, arabinose operon control protein BEK99_RS00315 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS00415 SM00487 DEAD-like helicases superfamily BEK99_RS00415 SM00490 helicase superfamily c-terminal domain BEK99_RS00440 SM00834 Putative regulatory protein BEK99_RS00600 SM01120 BEK99_RS00600 BEK99_RS00670 SM00382 ATPases associated with a variety of cellular activities BEK99_RS00860 SM00796 Allophanate hydrolase subunit 1 BEK99_RS00865 SM00797 Allophanate hydrolase subunit 2 BEK99_RS00870 SM00878 Biotin carboxylase C-terminal domain BEK99_RS00920 SM00899 BEK99_RS00920 BEK99_RS00955 SM00850 LytTr DNA-binding domain BEK99_RS00990 SM00829 Enoylreductase BEK99_RS00995 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BEK99_RS01045 SM00729 Elongator protein 3, MiaB family, Radical SAM BEK99_RS01045 SM00876 Biotin and Thiamin Synthesis associated domain BEK99_RS01075 SM00382 ATPases associated with a variety of cellular activities BEK99_RS01140 SM00354 helix_turn _helix lactose operon repressor BEK99_RS01185 SM00382 ATPases associated with a variety of cellular activities BEK99_RS01200 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS01215 SM00342 helix_turn_helix, arabinose operon control protein BEK99_RS01230 SM00382 ATPases associated with a variety of cellular activities BEK99_RS01270 SM00833 Cobalamin synthesis protein cobW C-terminal domain BEK99_RS01275 SM00954 Region found in RelA / SpoT proteins BEK99_RS01280 SM00382 ATPases associated with a variety of cellular activities BEK99_RS01280 SM01086 C-terminal, D2-small domain, of ClpB protein BEK99_RS01295 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEK99_RS01295 SM00895 BEK99_RS01295 BEK99_RS01345 SM00382 ATPases associated with a variety of cellular activities BEK99_RS01375 SM00116 Domain in cystathionine beta-synthase and other proteins. BEK99_RS01375 SM00382 ATPases associated with a variety of cellular activities BEK99_RS01425 SM00448 cheY-homologous receiver domain BEK99_RS01425 SM00850 LytTr DNA-binding domain BEK99_RS01430 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BEK99_RS01430 SM00387 Histidine kinase-like ATPases BEK99_RS01490 SM00855 Phosphoglycerate mutase family BEK99_RS01495 SM00062 Bacterial periplasmic substrate-binding proteins BEK99_RS01495 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BEK99_RS01505 SM00382 ATPases associated with a variety of cellular activities BEK99_RS01530 SM00867 YceI-like domain BEK99_RS01575 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BEK99_RS01600 SM00387 Histidine kinase-like ATPases BEK99_RS01605 SM00421 helix_turn_helix, Lux Regulon BEK99_RS01605 SM00448 cheY-homologous receiver domain BEK99_RS01640 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS01675 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS01695 SM00829 Enoylreductase BEK99_RS01725 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEK99_RS01725 SM00387 Histidine kinase-like ATPases BEK99_RS01725 SM00388 His Kinase A (phosphoacceptor) domain BEK99_RS01730 SM00448 cheY-homologous receiver domain BEK99_RS01730 SM00862 Transcriptional regulatory protein, C terminal BEK99_RS01740 SM00382 ATPases associated with a variety of cellular activities BEK99_RS01750 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS01845 SM00530 Helix-turn-helix XRE-family like proteins BEK99_RS01855 SM00382 ATPases associated with a variety of cellular activities BEK99_RS01925 SM00903 Flavin reductase like domain BEK99_RS01995 SM00420 helix_turn_helix, Deoxyribose operon repressor BEK99_RS02015 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BEK99_RS02015 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BEK99_RS02030 SM00047 Lysozyme subfamily 2 BEK99_RS02110 SM00988 UreE urease accessory protein, N-terminal domain BEK99_RS02155 SM00354 helix_turn _helix lactose operon repressor BEK99_RS02185 SM00382 ATPases associated with a variety of cellular activities BEK99_RS02195 SM00852 Probable molybdopterin binding domain BEK99_RS02205 SM00852 Probable molybdopterin binding domain BEK99_RS02230 SM00729 Elongator protein 3, MiaB family, Radical SAM BEK99_RS02245 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS02305 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BEK99_RS02305 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BEK99_RS02305 SM00493 BEK99_RS02305 BEK99_RS02325 SM01403 BEK99_RS02325 BEK99_RS02345 SM01382 BEK99_RS02345 BEK99_RS02345 SM01383 BEK99_RS02345 BEK99_RS02360 SM00322 K homology RNA-binding domain BEK99_RS02380 SM01374 BEK99_RS02380 BEK99_RS02385 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BEK99_RS02440 SM00316 Ribosomal protein S1-like RNA-binding domain BEK99_RS02460 SM00662 RNA polymerases D BEK99_RS02470 SM00382 ATPases associated with a variety of cellular activities BEK99_RS02475 SM00382 ATPases associated with a variety of cellular activities BEK99_RS02500 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS02545 SM00829 Enoylreductase BEK99_RS02555 SM00829 Enoylreductase BEK99_RS02560 SM00829 Enoylreductase BEK99_RS02790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEK99_RS02800 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEK99_RS02800 SM00895 BEK99_RS02800 BEK99_RS02840 SM01133 BEK99_RS02840 BEK99_RS02915 SM00357 Cold shock protein domain BEK99_RS02915 SM00382 ATPases associated with a variety of cellular activities BEK99_RS02915 SM00959 Rho termination factor, N-terminal domain BEK99_RS02930 SM00937 BEK99_RS02930 BEK99_RS02945 SM00226 Low molecular weight phosphatase family BEK99_RS03005 SM00382 ATPases associated with a variety of cellular activities BEK99_RS03090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEK99_RS03135 SM00487 DEAD-like helicases superfamily BEK99_RS03135 SM00490 helicase superfamily c-terminal domain BEK99_RS03160 SM01005 Alanine racemase, C-terminal domain BEK99_RS03175 SM00331 Sigma factor PP2C-like phosphatases BEK99_RS03175 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BEK99_RS03195 SM00316 Ribosomal protein S1-like RNA-binding domain BEK99_RS03195 SM00732 Likely ribonuclease with RNase H fold. BEK99_RS03240 SM01329 BEK99_RS03240 BEK99_RS03245 SM00917 LeuA allosteric (dimerisation) domain BEK99_RS03290 SM00382 ATPases associated with a variety of cellular activities BEK99_RS03295 SM00881 CoA binding domain BEK99_RS03310 SM00640 Glycosyl hydrolases family 32 BEK99_RS03315 SM00448 cheY-homologous receiver domain BEK99_RS03315 SM00850 LytTr DNA-binding domain BEK99_RS03325 SM00794 Staphylococcal AgrD protein BEK99_RS03330 SM00793 Accessory gene regulator B BEK99_RS03355 SM00883 Chaperonin 10 Kd subunit BEK99_RS03395 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEK99_RS03400 SM00382 ATPases associated with a variety of cellular activities BEK99_RS03410 SM00382 ATPases associated with a variety of cellular activities BEK99_RS03465 SM00710 Parallel beta-helix repeats BEK99_RS03475 SM01131 BEK99_RS03475 BEK99_RS03520 SM00998 Adenylosuccinate lyase C-terminus BEK99_RS03540 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEK99_RS03540 SM00292 breast cancer carboxy-terminal domain BEK99_RS03540 SM00532 Ligase N family BEK99_RS03570 SM00845 GatB domain BEK99_RS03575 SM00046 Diacylglycerol kinase catalytic domain (presumed) BEK99_RS03595 SM00479 BEK99_RS03595 BEK99_RS03630 SM00387 Histidine kinase-like ATPases BEK99_RS03635 SM00421 helix_turn_helix, Lux Regulon BEK99_RS03635 SM00448 cheY-homologous receiver domain BEK99_RS03640 SM00947 Carbonic anhydrase BEK99_RS03655 SM00226 Low molecular weight phosphatase family BEK99_RS03715 SM00478 endonuclease III BEK99_RS03715 SM00525 BEK99_RS03715 BEK99_RS03725 SM00382 ATPases associated with a variety of cellular activities BEK99_RS03900 SM00062 Bacterial periplasmic substrate-binding proteins BEK99_RS03900 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BEK99_RS03905 SM00382 ATPases associated with a variety of cellular activities BEK99_RS03910 SM00567 E-Z type HEAT repeats BEK99_RS03945 SM00421 helix_turn_helix, Lux Regulon BEK99_RS03945 SM00448 cheY-homologous receiver domain BEK99_RS03955 SM00530 Helix-turn-helix XRE-family like proteins BEK99_RS03980 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEK99_RS04005 SM00382 ATPases associated with a variety of cellular activities BEK99_RS04155 SM00990 BEK99_RS04155 BEK99_RS04190 SM00942 Primase C terminal 1 (PriCT-1) BEK99_RS04195 SM00885 D5 N terminal like BEK99_RS04265 SM00507 HNH nucleases BEK99_RS04355 SM00710 Parallel beta-helix repeats BEK99_RS04380 SM00644 BEK99_RS04380 BEK99_RS04435 SM01234 BEK99_RS04435 BEK99_RS04570 SM00729 Elongator protein 3, MiaB family, Radical SAM BEK99_RS04585 SM00450 Rhodanese Homology Domain BEK99_RS04600 SM00363 S4 RNA-binding domain BEK99_RS04630 SM00849 Metallo-beta-lactamase superfamily BEK99_RS04680 SM00830 Chorismate mutase type II BEK99_RS04685 SM00354 helix_turn _helix lactose operon repressor BEK99_RS04715 SM00363 S4 RNA-binding domain BEK99_RS04725 SM00563 Phosphate acyltransferases BEK99_RS04760 SM00363 S4 RNA-binding domain BEK99_RS04760 SM01390 BEK99_RS04760 BEK99_RS04780 SM00981 BEK99_RS04780 BEK99_RS04810 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BEK99_RS04810 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BEK99_RS04820 SM00849 Metallo-beta-lactamase superfamily BEK99_RS04840 SM00481 DNA polymerase alpha chain like domain BEK99_RS04845 SM00919 Malic enzyme, NAD binding domain BEK99_RS04845 SM01274 BEK99_RS04845 BEK99_RS04885 SM00448 cheY-homologous receiver domain BEK99_RS04885 SM00862 Transcriptional regulatory protein, C terminal BEK99_RS04890 SM00387 Histidine kinase-like ATPases BEK99_RS04890 SM00388 His Kinase A (phosphoacceptor) domain BEK99_RS04900 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BEK99_RS04900 SM01232 BEK99_RS04900 BEK99_RS04910 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEK99_RS04930 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BEK99_RS04970 SM00382 ATPases associated with a variety of cellular activities BEK99_RS04970 SM00994 ClpX C4-type zinc finger BEK99_RS04970 SM01086 C-terminal, D2-small domain, of ClpB protein BEK99_RS05000 SM01004 Delta-aminolevulinic acid dehydratase BEK99_RS05085 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEK99_RS05090 SM00382 ATPases associated with a variety of cellular activities BEK99_RS05105 SM01323 BEK99_RS05105 BEK99_RS05125 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEK99_RS05125 SM00954 Region found in RelA / SpoT proteins BEK99_RS05135 SM00287 Bacterial SH3 domain homologues BEK99_RS05135 SM00646 BEK99_RS05135 BEK99_RS05190 SM00028 Tetratricopeptide repeats BEK99_RS05195 SM00382 ATPases associated with a variety of cellular activities BEK99_RS05200 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BEK99_RS05210 SM00732 Likely ribonuclease with RNase H fold. BEK99_RS05265 SM01103 BEK99_RS05265 BEK99_RS05275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEK99_RS05290 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEK99_RS05320 SM00729 Elongator protein 3, MiaB family, Radical SAM BEK99_RS05340 SM00271 DnaJ molecular chaperone homology domain BEK99_RS05355 SM00729 Elongator protein 3, MiaB family, Radical SAM BEK99_RS05415 SM00116 Domain in cystathionine beta-synthase and other proteins. BEK99_RS05425 SM00400 zinc finger BEK99_RS05425 SM00493 BEK99_RS05425 BEK99_RS05445 SM00487 DEAD-like helicases superfamily BEK99_RS05445 SM00490 helicase superfamily c-terminal domain BEK99_RS05450 SM00518 AP endonuclease family 2 BEK99_RS05455 SM00382 ATPases associated with a variety of cellular activities BEK99_RS05505 SM00849 Metallo-beta-lactamase superfamily BEK99_RS05560 SM00450 Rhodanese Homology Domain BEK99_RS05585 SM00841 Elongation factor P, C-terminal BEK99_RS05585 SM01185 BEK99_RS05585 BEK99_RS05595 SM00878 Biotin carboxylase C-terminal domain BEK99_RS05655 SM00861 Transketolase, pyrimidine binding domain BEK99_RS05685 SM01350 BEK99_RS05685 BEK99_RS05690 SM00342 helix_turn_helix, arabinose operon control protein BEK99_RS05690 SM00871 Bacterial transcription activator, effector binding domain BEK99_RS05750 SM00363 S4 RNA-binding domain BEK99_RS05755 SM00448 cheY-homologous receiver domain BEK99_RS05755 SM00862 Transcriptional regulatory protein, C terminal BEK99_RS05760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEK99_RS05760 SM00387 Histidine kinase-like ATPases BEK99_RS05760 SM00388 His Kinase A (phosphoacceptor) domain BEK99_RS05780 SM00487 DEAD-like helicases superfamily BEK99_RS05780 SM00490 helicase superfamily c-terminal domain BEK99_RS05785 SM00257 Lysin motif BEK99_RS05795 SM00870 BEK99_RS05795 BEK99_RS05805 SM00316 Ribosomal protein S1-like RNA-binding domain BEK99_RS05820 SM00411 bacterial (prokaryotic) histone like domain BEK99_RS05840 SM00562 BEK99_RS05840 BEK99_RS05860 SM00028 Tetratricopeptide repeats BEK99_RS05900 SM00479 BEK99_RS05900 BEK99_RS05900 SM00491 BEK99_RS05900 BEK99_RS05915 SM00478 endonuclease III BEK99_RS05955 SM00981 BEK99_RS05955 BEK99_RS05970 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BEK99_RS05970 SM00475 5'-3' exonuclease BEK99_RS05985 SM00567 E-Z type HEAT repeats BEK99_RS05985 SM00932 Scaffold protein Nfu/NifU N terminal BEK99_RS06030 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BEK99_RS06030 SM00245 tail specific protease BEK99_RS06045 SM00014 Acid phosphatase homologues BEK99_RS06050 SM00448 cheY-homologous receiver domain BEK99_RS06050 SM00862 Transcriptional regulatory protein, C terminal BEK99_RS06055 SM00387 Histidine kinase-like ATPases BEK99_RS06055 SM00388 His Kinase A (phosphoacceptor) domain BEK99_RS06060 SM00861 Transketolase, pyrimidine binding domain BEK99_RS06085 SM00382 ATPases associated with a variety of cellular activities BEK99_RS06090 SM00327 von Willebrand factor (vWF) type A domain BEK99_RS06100 SM00046 Diacylglycerol kinase catalytic domain (presumed) BEK99_RS06125 SM00357 Cold shock protein domain BEK99_RS06135 SM01005 Alanine racemase, C-terminal domain BEK99_RS06155 SM01130 BEK99_RS06155 BEK99_RS06160 SM00859 Semialdehyde dehydrogenase, NAD binding domain BEK99_RS06170 SM00382 ATPases associated with a variety of cellular activities BEK99_RS06195 SM00382 ATPases associated with a variety of cellular activities BEK99_RS06230 SM00382 ATPases associated with a variety of cellular activities BEK99_RS06235 SM00382 ATPases associated with a variety of cellular activities BEK99_RS06345 SM01061 CAT RNA binding domain BEK99_RS06355 SM00434 DNA Topoisomerase IV BEK99_RS06360 SM00387 Histidine kinase-like ATPases BEK99_RS06360 SM00433 TopoisomeraseII BEK99_RS06365 SM01207 BEK99_RS06365 BEK99_RS06415 SM00861 Transketolase, pyrimidine binding domain BEK99_RS06440 SM01240 BEK99_RS06440 BEK99_RS06495 SM01134 BEK99_RS06495 BEK99_RS06515 SM00318 Staphylococcal nuclease homologues BEK99_RS06525 SM00155 Phospholipase D. Active site motifs. BEK99_RS06535 SM00422 helix_turn_helix, mercury resistance BEK99_RS06595 SM00853 MutL C terminal dimerisation domain BEK99_RS06595 SM01340 BEK99_RS06595 BEK99_RS06600 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BEK99_RS06600 SM00534 ATPase domain of DNA mismatch repair MUTS family BEK99_RS06640 SM00382 ATPases associated with a variety of cellular activities BEK99_RS06690 SM00322 K homology RNA-binding domain BEK99_RS06690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEK99_RS06695 SM00382 ATPases associated with a variety of cellular activities BEK99_RS06700 SM00852 Probable molybdopterin binding domain BEK99_RS06735 SM00866 BEK99_RS06735 BEK99_RS06740 SM00382 ATPases associated with a variety of cellular activities BEK99_RS06740 SM00843 BEK99_RS06740 BEK99_RS06745 SM00849 Metallo-beta-lactamase superfamily BEK99_RS06750 SM00316 Ribosomal protein S1-like RNA-binding domain BEK99_RS06750 SM00322 K homology RNA-binding domain BEK99_RS06755 SM01387 BEK99_RS06755 BEK99_RS06760 SM00904 Riboflavin kinase BEK99_RS06810 SM00316 Ribosomal protein S1-like RNA-binding domain BEK99_RS06810 SM00322 K homology RNA-binding domain BEK99_RS06820 SM00479 BEK99_RS06820 BEK99_RS06820 SM00481 DNA polymerase alpha chain like domain BEK99_RS06870 SM00382 ATPases associated with a variety of cellular activities BEK99_RS06870 SM01086 C-terminal, D2-small domain, of ClpB protein BEK99_RS06890 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BEK99_RS06890 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BEK99_RS06890 SM00493 BEK99_RS06890 BEK99_RS06895 SM00881 CoA binding domain BEK99_RS06935 SM00382 ATPases associated with a variety of cellular activities BEK99_RS06940 SM00420 helix_turn_helix, Deoxyribose operon repressor BEK99_RS06940 SM01134 BEK99_RS06940 BEK99_RS07010 SM00382 ATPases associated with a variety of cellular activities BEK99_RS07010 SM00962 SRP54-type protein, GTPase domain BEK99_RS07010 SM00963 SRP54-type protein, helical bundle domain BEK99_RS07020 SM00382 ATPases associated with a variety of cellular activities BEK99_RS07020 SM00962 SRP54-type protein, GTPase domain BEK99_RS07020 SM00963 SRP54-type protein, helical bundle domain BEK99_RS07025 SM00968 SMC proteins Flexible Hinge Domain BEK99_RS07030 SM00358 Double-stranded RNA binding motif BEK99_RS07030 SM00535 Ribonuclease III family BEK99_RS07040 SM00822 BEK99_RS07040 BEK99_RS07045 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BEK99_RS07060 SM00487 DEAD-like helicases superfamily BEK99_RS07060 SM00490 helicase superfamily c-terminal domain BEK99_RS07080 SM01120 BEK99_RS07080 BEK99_RS07080 SM01121 BEK99_RS07080 BEK99_RS07100 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BEK99_RS07115 SM00220 Serine/Threonine protein kinases, catalytic domain BEK99_RS07115 SM00740 BEK99_RS07115 BEK99_RS07120 SM00331 Sigma factor PP2C-like phosphatases BEK99_RS07120 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BEK99_RS07165 SM00487 DEAD-like helicases superfamily BEK99_RS07165 SM00490 helicase superfamily c-terminal domain BEK99_RS07180 SM01409 BEK99_RS07180 BEK99_RS07215 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BEK99_RS07230 SM00851 MGS-like domain BEK99_RS07230 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BEK99_RS07230 SM01209 BEK99_RS07230 BEK99_RS07235 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BEK99_RS07260 SM00363 S4 RNA-binding domain BEK99_RS07290 SM00363 S4 RNA-binding domain BEK99_RS07315 SM00864 Tubulin/FtsZ family, GTPase domain BEK99_RS07315 SM00865 Tubulin/FtsZ family, C-terminal domain BEK99_RS07320 SM00842 Cell division protein FtsA BEK99_RS07340 SM00740 BEK99_RS07340 BEK99_RS07400 SM00910 BEK99_RS07400 BEK99_RS07470 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS07495 SM00465 GIY-YIG type nucleases (URI domain) BEK99_RS07505 SM00463 Small MutS-related domain BEK99_RS07505 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BEK99_RS07505 SM00534 ATPase domain of DNA mismatch repair MUTS family BEK99_RS07510 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEK99_RS07510 SM00481 DNA polymerase alpha chain like domain BEK99_RS07510 SM00483 DNA polymerase X family BEK99_RS07540 SM00967 RNA 2'-O ribose methyltransferase substrate binding BEK99_RS07615 SM00878 Biotin carboxylase C-terminal domain BEK99_RS07640 SM00838 Elongation factor G C-terminus BEK99_RS07690 SM00382 ATPases associated with a variety of cellular activities BEK99_RS07695 SM00530 Helix-turn-helix XRE-family like proteins BEK99_RS07715 SM00861 Transketolase, pyrimidine binding domain BEK99_RS07745 SM00849 Metallo-beta-lactamase superfamily BEK99_RS07755 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BEK99_RS07830 SM01209 BEK99_RS07830 BEK99_RS07830 SM01210 BEK99_RS07830 BEK99_RS07835 SM00798 AICARFT/IMPCHase bienzyme BEK99_RS07835 SM00851 MGS-like domain BEK99_RS07860 SM01211 BEK99_RS07860 BEK99_RS07880 SM01001 AIR carboxylase BEK99_RS07930 SM00420 helix_turn_helix, Deoxyribose operon repressor BEK99_RS07930 SM01134 BEK99_RS07930 BEK99_RS07960 SM00226 Low molecular weight phosphatase family BEK99_RS08010 SM00047 Lysozyme subfamily 2 BEK99_RS08010 SM00644 BEK99_RS08010 BEK99_RS08015 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS08030 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS08090 SM00914 BEK99_RS08090 BEK99_RS08260 SM00116 Domain in cystathionine beta-synthase and other proteins. BEK99_RS08260 SM00924 MgtE intracellular N domain BEK99_RS08275 SM00954 Region found in RelA / SpoT proteins BEK99_RS08285 SM01118 BEK99_RS08285 BEK99_RS08345 SM00382 ATPases associated with a variety of cellular activities BEK99_RS08350 SM00382 ATPases associated with a variety of cellular activities BEK99_RS08375 SM00825 Beta-ketoacyl synthase BEK99_RS08390 SM00382 ATPases associated with a variety of cellular activities BEK99_RS08390 SM01086 C-terminal, D2-small domain, of ClpB protein BEK99_RS08470 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BEK99_RS08490 SM00316 Ribosomal protein S1-like RNA-binding domain BEK99_RS08510 SM01298 BEK99_RS08510 BEK99_RS08605 SM00422 helix_turn_helix, mercury resistance BEK99_RS08665 SM00729 Elongator protein 3, MiaB family, Radical SAM BEK99_RS08710 SM00644 BEK99_RS08710 BEK99_RS08765 SM00635 Bacterial Ig-like domain 2 BEK99_RS08820 SM00507 HNH nucleases BEK99_RS08895 SM00382 ATPases associated with a variety of cellular activities BEK99_RS08960 SM01040 BRO family, N-terminal domain BEK99_RS08965 SM00530 Helix-turn-helix XRE-family like proteins BEK99_RS08970 SM00530 Helix-turn-helix XRE-family like proteins BEK99_RS09025 SM00382 ATPases associated with a variety of cellular activities BEK99_RS09040 SM00382 ATPases associated with a variety of cellular activities BEK99_RS09040 SM00930 BEK99_RS09040 BEK99_RS09050 SM00493 BEK99_RS09050 BEK99_RS09130 SM00357 Cold shock protein domain BEK99_RS09145 SM00903 Flavin reductase like domain BEK99_RS09160 SM00316 Ribosomal protein S1-like RNA-binding domain BEK99_RS09160 SM00357 Cold shock protein domain BEK99_RS09160 SM00955 BEK99_RS09160 BEK99_RS09180 SM01192 BEK99_RS09180 BEK99_RS09180 SM01193 BEK99_RS09180 BEK99_RS09200 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BEK99_RS09265 SM00028 Tetratricopeptide repeats BEK99_RS09290 SM00487 DEAD-like helicases superfamily BEK99_RS09290 SM00490 helicase superfamily c-terminal domain BEK99_RS09305 SM00257 Lysin motif BEK99_RS09310 SM00937 BEK99_RS09310 BEK99_RS09315 SM00957 SecA DEAD-like domain BEK99_RS09315 SM00958 SecA preprotein cross-linking domain BEK99_RS09330 SM00487 DEAD-like helicases superfamily BEK99_RS09330 SM00490 helicase superfamily c-terminal domain BEK99_RS09350 SM00267 diguanylate cyclase BEK99_RS09410 SM00382 ATPases associated with a variety of cellular activities BEK99_RS09475 SM00382 ATPases associated with a variety of cellular activities BEK99_RS09480 SM00341 Helicase and RNase D C-terminal BEK99_RS09480 SM00487 DEAD-like helicases superfamily BEK99_RS09480 SM00490 helicase superfamily c-terminal domain BEK99_RS09480 SM00956 BEK99_RS09480 BEK99_RS09485 SM00382 ATPases associated with a variety of cellular activities BEK99_RS09495 SM00797 Allophanate hydrolase subunit 2 BEK99_RS09500 SM00796 Allophanate hydrolase subunit 1 BEK99_RS09555 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEK99_RS09555 SM00387 Histidine kinase-like ATPases BEK99_RS09555 SM00388 His Kinase A (phosphoacceptor) domain BEK99_RS09560 SM00448 cheY-homologous receiver domain BEK99_RS09560 SM00862 Transcriptional regulatory protein, C terminal BEK99_RS09575 SM01091 Transporter associated domain BEK99_RS09590 SM00420 helix_turn_helix, Deoxyribose operon repressor BEK99_RS09590 SM01134 BEK99_RS09590 BEK99_RS09655 SM00833 Cobalamin synthesis protein cobW C-terminal domain BEK99_RS09660 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS09665 SM00382 ATPases associated with a variety of cellular activities BEK99_RS09670 SM00382 ATPases associated with a variety of cellular activities BEK99_RS09755 SM00342 helix_turn_helix, arabinose operon control protein BEK99_RS09765 SM00257 Lysin motif BEK99_RS09805 SM00387 Histidine kinase-like ATPases BEK99_RS09805 SM00388 His Kinase A (phosphoacceptor) domain BEK99_RS09810 SM00448 cheY-homologous receiver domain BEK99_RS09810 SM00862 Transcriptional regulatory protein, C terminal BEK99_RS09845 SM00382 ATPases associated with a variety of cellular activities BEK99_RS09860 SM00382 ATPases associated with a variety of cellular activities BEK99_RS09890 SM00382 ATPases associated with a variety of cellular activities BEK99_RS09920 SM01266 BEK99_RS09920 BEK99_RS09935 SM00014 Acid phosphatase homologues BEK99_RS09940 SM00529 Helix-turn-helix diphteria tox regulatory element BEK99_RS10020 SM00836 DALR anticodon binding domain BEK99_RS10020 SM01016 Arginyl tRNA synthetase N terminal dom BEK99_RS10065 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BEK99_RS10155 SM00986 Uracil DNA glycosylase superfamily BEK99_RS10155 SM00987 UreE urease accessory protein, C-terminal domain BEK99_RS10190 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BEK99_RS10290 SM00838 Elongation factor G C-terminus BEK99_RS10290 SM00889 Elongation factor G, domain IV BEK99_RS10315 SM00663 RNA polymerase I subunit A N-terminus BEK99_RS10345 SM00649 Ribosomal protein L11/L12 BEK99_RS10350 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BEK99_RS10350 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BEK99_RS10370 SM00967 RNA 2'-O ribose methyltransferase substrate binding BEK99_RS10375 SM00535 Ribonuclease III family BEK99_RS10380 SM00840 BEK99_RS10380 BEK99_RS10400 SM00382 ATPases associated with a variety of cellular activities BEK99_RS10405 SM00382 ATPases associated with a variety of cellular activities BEK99_RS10405 SM01086 C-terminal, D2-small domain, of ClpB protein BEK99_RS10430 SM01022 BEK99_RS10430 BEK99_RS10560 SM00905 Dihydroneopterin aldolase BEK99_RS10580 SM00382 ATPases associated with a variety of cellular activities BEK99_RS10590 SM00977 TilS substrate C-terminal domain BEK99_RS10595 SM00316 Ribosomal protein S1-like RNA-binding domain BEK99_RS10605 SM00363 S4 RNA-binding domain BEK99_RS10620 SM00487 DEAD-like helicases superfamily BEK99_RS10620 SM00490 helicase superfamily c-terminal domain BEK99_RS10620 SM00982 BEK99_RS10620 BEK99_RS10620 SM01058 CarD-like/TRCF domain BEK99_RS10635 SM01400 BEK99_RS10635 BEK99_RS10670 SM00650 Ribosomal RNA adenine dimethylases BEK99_RS10675 SM00493 BEK99_RS10675 BEK99_RS10790 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BEK99_RS10790 SM00493 BEK99_RS10790 BEK99_RS10800 SM00382 ATPases associated with a variety of cellular activities BEK99_RS10835 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEK99_RS10840 SM00345 helix_turn_helix gluconate operon transcriptional repressor BEK99_RS10840 SM00866 BEK99_RS10840 BEK99_RS10845 SM00642 Alpha-amylase domain BEK99_RS10920 SM00257 Lysin motif BEK99_RS11065 SM00822 BEK99_RS11065 BEK99_RS11140 SM00116 Domain in cystathionine beta-synthase and other proteins. BEK99_RS11140 SM01240 BEK99_RS11140 BEK99_RS11200 SM00014 Acid phosphatase homologues BEK99_RS11220 SM00855 Phosphoglycerate mutase family BEK99_RS11255 SM00318 Staphylococcal nuclease homologues BEK99_RS11255 SM00894 Excalibur calcium-binding domain BEK99_RS11310 SM00470 ParB-like nuclease domain BEK99_RS11350 SM00470 ParB-like nuclease domain BEK99_RS11360 SM01228 BEK99_RS11360 BEK99_RS11380 SM00382 ATPases associated with a variety of cellular activities BEK99_RS11380 SM00760 Bacterial dnaA protein helix-turn-helix domain BEK99_RS11385 SM00480 DNA polymerase III beta subunit BEK99_RS11400 SM00387 Histidine kinase-like ATPases BEK99_RS11400 SM00433 TopoisomeraseII BEK99_RS11405 SM00434 DNA Topoisomerase IV BEK99_RS11440 SM00267 diguanylate cyclase BEK99_RS11455 SM00788 Adenylosuccinate synthetase BEK99_RS11475 SM00448 cheY-homologous receiver domain BEK99_RS11475 SM00862 Transcriptional regulatory protein, C terminal BEK99_RS11480 SM00091 PAS domain BEK99_RS11480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BEK99_RS11480 SM00387 Histidine kinase-like ATPases BEK99_RS11480 SM00388 His Kinase A (phosphoacceptor) domain BEK99_RS11495 SM00849 Metallo-beta-lactamase superfamily BEK99_RS11510 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEK99_RS11515 SM00226 Low molecular weight phosphatase family BEK99_RS11525 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEK99_RS11535 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEK99_RS11575 SM00857 Resolvase, N terminal domain BEK99_RS11580 SM00857 Resolvase, N terminal domain BEK99_RS11605 SM00901 BEK99_RS11605 BEK99_RS11625 SM00861 Transketolase, pyrimidine binding domain BEK99_RS11670 SM00857 Resolvase, N terminal domain BEK99_RS11750 SM00450 Rhodanese Homology Domain BEK99_RS11755 SM00450 Rhodanese Homology Domain BEK99_RS11755 SM00849 Metallo-beta-lactamase superfamily BEK99_RS11765 SM00226 Low molecular weight phosphatase family BEK99_RS11775 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEK99_RS11780 SM00422 helix_turn_helix, mercury resistance BEK99_RS11795 SM00829 Enoylreductase BEK99_RS11925 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEK99_RS11950 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS11960 SM00047 Lysozyme subfamily 2 BEK99_RS11970 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS12020 SM00382 ATPases associated with a variety of cellular activities BEK99_RS12045 SM00354 helix_turn _helix lactose operon repressor BEK99_RS12090 SM00882 Coenzyme A transferase BEK99_RS12170 SM01130 BEK99_RS12170 BEK99_RS12205 SM00422 helix_turn_helix, mercury resistance BEK99_RS12275 SM00448 cheY-homologous receiver domain BEK99_RS12275 SM01012 BEK99_RS12275 BEK99_RS12290 SM01230 BEK99_RS12290 BEK99_RS12325 SM01217 BEK99_RS12325 BEK99_RS12350 SM01060 BEK99_RS12350 BEK99_RS12355 SM00829 Enoylreductase BEK99_RS12375 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BEK99_RS12540 SM00465 GIY-YIG type nucleases (URI domain) BEK99_RS12680 SM00347 helix_turn_helix multiple antibiotic resistance protein BEK99_RS12685 SM00829 Enoylreductase BEK99_RS12800 SM00854 Bacterial capsule synthesis protein PGA_cap BEK99_RS12910 SM00382 ATPases associated with a variety of cellular activities BEK99_RS12960 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain