CEQ12_RS00005 SM01350 CEQ12_RS00005 CEQ12_RS00035 SM01321 CEQ12_RS00035 CEQ12_RS00065 SM00829 Enoylreductase CEQ12_RS00070 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ12_RS00100 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ12_RS00115 SM00857 Resolvase, N terminal domain CEQ12_RS00130 SM00857 Resolvase, N terminal domain CEQ12_RS00150 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ12_RS00170 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ12_RS00170 SM01134 CEQ12_RS00170 CEQ12_RS00265 SM00857 Resolvase, N terminal domain CEQ12_RS00270 SM00829 Enoylreductase CEQ12_RS00310 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ12_RS00310 SM00876 Biotin and Thiamin Synthesis associated domain CEQ12_RS00325 SM00850 LytTr DNA-binding domain CEQ12_RS00365 SM00857 Resolvase, N terminal domain CEQ12_RS00370 SM00857 Resolvase, N terminal domain CEQ12_RS00385 SM00857 Resolvase, N terminal domain CEQ12_RS00405 SM00062 Bacterial periplasmic substrate-binding proteins CEQ12_RS00415 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS00470 SM01060 CEQ12_RS00470 CEQ12_RS00510 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEQ12_RS00575 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ12_RS00575 SM00924 MgtE intracellular N domain CEQ12_RS00590 SM00954 Region found in RelA / SpoT proteins CEQ12_RS00600 SM01118 CEQ12_RS00600 CEQ12_RS00645 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS00650 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS00675 SM00825 Beta-ketoacyl synthase CEQ12_RS00690 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS00690 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ12_RS00775 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ12_RS00785 SM00226 Low molecular weight phosphatase family CEQ12_RS00795 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEQ12_RS00810 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ12_RS00820 SM01298 CEQ12_RS00820 CEQ12_RS00960 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ12_RS01010 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS01030 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS01030 SM00930 CEQ12_RS01030 CEQ12_RS01040 SM00493 CEQ12_RS01040 CEQ12_RS01300 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ12_RS01300 SM00357 Cold shock protein domain CEQ12_RS01300 SM00955 CEQ12_RS01300 CEQ12_RS01320 SM01192 CEQ12_RS01320 CEQ12_RS01320 SM01193 CEQ12_RS01320 CEQ12_RS01340 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ12_RS01465 SM00942 Primase C terminal 1 (PriCT-1) CEQ12_RS01490 SM01040 BRO family, N-terminal domain CEQ12_RS01495 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS01500 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS01535 SM00028 Tetratricopeptide repeats CEQ12_RS01560 SM00487 DEAD-like helicases superfamily CEQ12_RS01560 SM00490 helicase superfamily c-terminal domain CEQ12_RS01575 SM00257 Lysin motif CEQ12_RS01585 SM00957 SecA DEAD-like domain CEQ12_RS01585 SM00958 SecA preprotein cross-linking domain CEQ12_RS01600 SM00487 DEAD-like helicases superfamily CEQ12_RS01600 SM00490 helicase superfamily c-terminal domain CEQ12_RS01620 SM00267 diguanylate cyclase CEQ12_RS01680 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS01735 SM00046 Diacylglycerol kinase catalytic domain (presumed) CEQ12_RS01755 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS01760 SM00341 Helicase and RNase D C-terminal CEQ12_RS01760 SM00487 DEAD-like helicases superfamily CEQ12_RS01760 SM00490 helicase superfamily c-terminal domain CEQ12_RS01760 SM00956 CEQ12_RS01760 CEQ12_RS01765 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS01780 SM00797 Allophanate hydrolase subunit 2 CEQ12_RS01785 SM00796 Allophanate hydrolase subunit 1 CEQ12_RS01845 SM01091 Transporter associated domain CEQ12_RS01865 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ12_RS01865 SM01134 CEQ12_RS01865 CEQ12_RS01930 SM00833 Cobalamin synthesis protein cobW C-terminal domain CEQ12_RS01935 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS01940 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS01945 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS01975 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ12_RS02050 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS02060 SM00257 Lysin motif CEQ12_RS02075 SM00387 Histidine kinase-like ATPases CEQ12_RS02080 SM00448 cheY-homologous receiver domain CEQ12_RS02080 SM00862 Transcriptional regulatory protein, C terminal CEQ12_RS02115 SM01120 CEQ12_RS02115 CEQ12_RS02135 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS02150 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS02180 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS02200 SM00529 Helix-turn-helix diphteria tox regulatory element CEQ12_RS02200 SM00899 CEQ12_RS02200 CEQ12_RS02205 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS02290 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS02330 SM00478 endonuclease III CEQ12_RS02335 SM00836 DALR anticodon binding domain CEQ12_RS02335 SM01016 Arginyl tRNA synthetase N terminal dom CEQ12_RS02350 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ12_RS02450 SM00986 Uracil DNA glycosylase superfamily CEQ12_RS02450 SM00987 UreE urease accessory protein, C-terminal domain CEQ12_RS02465 SM01022 CEQ12_RS02465 CEQ12_RS02500 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ12_RS02525 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS02570 SM00835 Cupin CEQ12_RS02610 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CEQ12_RS02675 SM00354 helix_turn _helix lactose operon repressor CEQ12_RS02730 SM00882 Coenzyme A transferase CEQ12_RS02735 SM00882 Coenzyme A transferase CEQ12_RS02780 SM00838 Elongation factor G C-terminus CEQ12_RS02780 SM00889 Elongation factor G, domain IV CEQ12_RS02800 SM00663 RNA polymerase I subunit A N-terminus CEQ12_RS02830 SM00649 Ribosomal protein L11/L12 CEQ12_RS02835 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. CEQ12_RS02860 SM00967 RNA 2'-O ribose methyltransferase substrate binding CEQ12_RS02870 SM00840 CEQ12_RS02870 CEQ12_RS02885 SM00670 Large family of predicted nucleotide-binding domains CEQ12_RS02890 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS02895 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS02895 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ12_RS02930 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ12_RS03025 SM00905 Dihydroneopterin aldolase CEQ12_RS03045 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS03055 SM00977 TilS substrate C-terminal domain CEQ12_RS03060 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ12_RS03070 SM00363 S4 RNA-binding domain CEQ12_RS03085 SM00487 DEAD-like helicases superfamily CEQ12_RS03085 SM00490 helicase superfamily c-terminal domain CEQ12_RS03085 SM00982 CEQ12_RS03085 CEQ12_RS03085 SM01058 CarD-like/TRCF domain CEQ12_RS03100 SM01400 CEQ12_RS03100 CEQ12_RS03135 SM00650 Ribosomal RNA adenine dimethylases CEQ12_RS03140 SM00493 CEQ12_RS03140 CEQ12_RS03160 SM00465 GIY-YIG type nucleases (URI domain) CEQ12_RS03215 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ12_RS03215 SM00493 CEQ12_RS03215 CEQ12_RS03225 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS03240 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ12_RS03240 SM00866 CEQ12_RS03240 CEQ12_RS03245 SM00642 Alpha-amylase domain CEQ12_RS03305 SM00257 Lysin motif CEQ12_RS03415 SM00855 Phosphoglycerate mutase family CEQ12_RS03450 SM00357 Cold shock protein domain CEQ12_RS03535 SM00857 Resolvase, N terminal domain CEQ12_RS03550 SM00857 Resolvase, N terminal domain CEQ12_RS03560 SM00857 Resolvase, N terminal domain CEQ12_RS03590 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ12_RS03590 SM01240 CEQ12_RS03590 CEQ12_RS03655 SM01060 CEQ12_RS03655 CEQ12_RS03660 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS03685 SM00855 Phosphoglycerate mutase family CEQ12_RS03750 SM00257 Lysin motif CEQ12_RS03750 SM00644 CEQ12_RS03750 CEQ12_RS03765 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS03865 SM00479 CEQ12_RS03865 CEQ12_RS03930 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS03940 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS03985 SM00014 Acid phosphatase homologues CEQ12_RS04095 SM00470 ParB-like nuclease domain CEQ12_RS04135 SM00850 LytTr DNA-binding domain CEQ12_RS04170 SM00882 Coenzyme A transferase CEQ12_RS04175 SM00422 helix_turn_helix, mercury resistance CEQ12_RS04195 SM00850 LytTr DNA-binding domain CEQ12_RS04215 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS04250 SM00899 CEQ12_RS04250 CEQ12_RS04280 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS04290 SM00470 ParB-like nuclease domain CEQ12_RS04300 SM01228 CEQ12_RS04300 CEQ12_RS04320 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS04320 SM00760 Bacterial dnaA protein helix-turn-helix domain CEQ12_RS04325 SM00480 DNA polymerase III beta subunit CEQ12_RS04340 SM00387 Histidine kinase-like ATPases CEQ12_RS04340 SM00433 TopoisomeraseII CEQ12_RS04345 SM00434 DNA Topoisomerase IV CEQ12_RS04385 SM00267 diguanylate cyclase CEQ12_RS04400 SM00788 Adenylosuccinate synthetase CEQ12_RS04420 SM00448 cheY-homologous receiver domain CEQ12_RS04420 SM00862 Transcriptional regulatory protein, C terminal CEQ12_RS04425 SM00091 PAS domain CEQ12_RS04425 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ12_RS04425 SM00387 Histidine kinase-like ATPases CEQ12_RS04425 SM00388 His Kinase A (phosphoacceptor) domain CEQ12_RS04440 SM00849 Metallo-beta-lactamase superfamily CEQ12_RS04460 SM00047 Lysozyme subfamily 2 CEQ12_RS04560 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ12_RS04580 SM00450 Rhodanese Homology Domain CEQ12_RS04585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ12_RS04595 SM00226 Low molecular weight phosphatase family CEQ12_RS04605 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ12_RS04635 SM00857 Resolvase, N terminal domain CEQ12_RS04640 SM00450 Rhodanese Homology Domain CEQ12_RS04640 SM00849 Metallo-beta-lactamase superfamily CEQ12_RS04645 SM00450 Rhodanese Homology Domain CEQ12_RS04660 SM00857 Resolvase, N terminal domain CEQ12_RS04690 SM00829 Enoylreductase CEQ12_RS04740 SM00422 helix_turn_helix, mercury resistance CEQ12_RS04775 SM00422 helix_turn_helix, mercury resistance CEQ12_RS04835 SM00829 Enoylreductase CEQ12_RS04880 SM00849 Metallo-beta-lactamase superfamily CEQ12_RS04885 SM00829 Enoylreductase CEQ12_RS04905 SM01061 CAT RNA binding domain CEQ12_RS04950 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ12_RS04965 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS04975 SM01038 Beta galactosidase small chain CEQ12_RS04985 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS05045 SM00450 Rhodanese Homology Domain CEQ12_RS05065 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS05075 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS05245 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS05275 SM00506 Appr-1"-p processing enzyme CEQ12_RS05305 SM01001 AIR carboxylase CEQ12_RS05360 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS05365 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS05375 SM00155 Phospholipase D. Active site motifs. CEQ12_RS05380 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ12_RS05450 SM00854 Bacterial capsule synthesis protein PGA_cap CEQ12_RS05480 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS05490 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ12_RS05490 SM01134 CEQ12_RS05490 CEQ12_RS05495 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS05525 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEQ12_RS05655 SM00829 Enoylreductase CEQ12_RS05660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ12_RS05725 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS05770 SM00988 UreE urease accessory protein, N-terminal domain CEQ12_RS05810 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS05815 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS05825 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS05890 SM00478 endonuclease III CEQ12_RS05940 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS05970 SM01266 CEQ12_RS05970 CEQ12_RS06010 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS06150 SM00854 Bacterial capsule synthesis protein PGA_cap CEQ12_RS06180 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS06185 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS06190 SM00354 helix_turn _helix lactose operon repressor CEQ12_RS06205 SM00829 Enoylreductase CEQ12_RS06245 SM01130 CEQ12_RS06245 CEQ12_RS06270 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS06275 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS06295 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS06370 SM00954 Region found in RelA / SpoT proteins CEQ12_RS06375 SM00422 helix_turn_helix, mercury resistance CEQ12_RS06380 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ12_RS06380 SM00895 CEQ12_RS06380 CEQ12_RS06400 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS06540 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS06585 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ12_RS06585 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS06625 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS06645 SM00448 cheY-homologous receiver domain CEQ12_RS06645 SM00850 LytTr DNA-binding domain CEQ12_RS06650 SM00387 Histidine kinase-like ATPases CEQ12_RS06705 SM00871 Bacterial transcription activator, effector binding domain CEQ12_RS06730 SM00855 Phosphoglycerate mutase family CEQ12_RS06745 SM01022 CEQ12_RS06745 CEQ12_RS06765 SM00867 YceI-like domain CEQ12_RS06805 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS06825 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS06830 SM00644 CEQ12_RS06830 CEQ12_RS06860 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ12_RS06860 SM01134 CEQ12_RS06860 CEQ12_RS06875 SM01120 CEQ12_RS06875 CEQ12_RS06915 SM00829 Enoylreductase CEQ12_RS06950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ12_RS06950 SM00387 Histidine kinase-like ATPases CEQ12_RS06950 SM00388 His Kinase A (phosphoacceptor) domain CEQ12_RS06955 SM00448 cheY-homologous receiver domain CEQ12_RS06955 SM00862 Transcriptional regulatory protein, C terminal CEQ12_RS06965 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS06975 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS07075 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS07145 SM00903 Flavin reductase like domain CEQ12_RS07210 SM00098 Alkaline phosphatase homologues CEQ12_RS07245 SM00420 helix_turn_helix, Deoxyribose operon repressor CEQ12_RS07260 SM00926 Molybdopterin oxidoreductase Fe4S4 domain CEQ12_RS07260 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CEQ12_RS07275 SM00047 Lysozyme subfamily 2 CEQ12_RS07355 SM00062 Bacterial periplasmic substrate-binding proteins CEQ12_RS07360 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS07390 SM00354 helix_turn _helix lactose operon repressor CEQ12_RS07420 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS07435 SM00852 Probable molybdopterin binding domain CEQ12_RS07445 SM00852 Probable molybdopterin binding domain CEQ12_RS07470 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ12_RS07485 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS07535 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEQ12_RS07535 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEQ12_RS07535 SM00493 CEQ12_RS07535 CEQ12_RS07550 SM01403 CEQ12_RS07550 CEQ12_RS07570 SM01382 CEQ12_RS07570 CEQ12_RS07570 SM01383 CEQ12_RS07570 CEQ12_RS07585 SM00322 K homology RNA-binding domain CEQ12_RS07605 SM01374 CEQ12_RS07605 CEQ12_RS07610 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. CEQ12_RS07665 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ12_RS07685 SM00662 RNA polymerases D CEQ12_RS07695 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS07700 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS07735 SM00829 Enoylreductase CEQ12_RS07740 SM00829 Enoylreductase CEQ12_RS07950 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS07975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor CEQ12_RS07985 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ12_RS07985 SM00895 CEQ12_RS07985 CEQ12_RS08030 SM01133 CEQ12_RS08030 CEQ12_RS08035 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain CEQ12_RS08120 SM00357 Cold shock protein domain CEQ12_RS08120 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS08120 SM00959 Rho termination factor, N-terminal domain CEQ12_RS08135 SM00937 CEQ12_RS08135 CEQ12_RS08150 SM00226 Low molecular weight phosphatase family CEQ12_RS08210 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS08275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ12_RS08280 SM00155 Phospholipase D. Active site motifs. CEQ12_RS08315 SM00487 DEAD-like helicases superfamily CEQ12_RS08315 SM00490 helicase superfamily c-terminal domain CEQ12_RS08340 SM01005 Alanine racemase, C-terminal domain CEQ12_RS08355 SM00331 Sigma factor PP2C-like phosphatases CEQ12_RS08355 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CEQ12_RS08375 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ12_RS08375 SM00732 Likely ribonuclease with RNase H fold. CEQ12_RS08380 SM00731 SprT homologues. CEQ12_RS08425 SM01329 CEQ12_RS08425 CEQ12_RS08430 SM00917 LeuA allosteric (dimerisation) domain CEQ12_RS08480 SM00534 ATPase domain of DNA mismatch repair MUTS family CEQ12_RS08485 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS08490 SM00881 CoA binding domain CEQ12_RS08505 SM00640 Glycosyl hydrolases family 32 CEQ12_RS08515 SM00448 cheY-homologous receiver domain CEQ12_RS08515 SM00850 LytTr DNA-binding domain CEQ12_RS08525 SM00794 Staphylococcal AgrD protein CEQ12_RS08530 SM00793 Accessory gene regulator B CEQ12_RS08555 SM00883 Chaperonin 10 Kd subunit CEQ12_RS08580 SM00345 helix_turn_helix gluconate operon transcriptional repressor CEQ12_RS08585 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS08595 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS08645 SM01131 CEQ12_RS08645 CEQ12_RS08655 SM00710 Parallel beta-helix repeats CEQ12_RS08695 SM00998 Adenylosuccinate lyase C-terminus CEQ12_RS08715 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ12_RS08715 SM00292 breast cancer carboxy-terminal domain CEQ12_RS08715 SM00532 Ligase N family CEQ12_RS08740 SM00845 GatB domain CEQ12_RS08745 SM00046 Diacylglycerol kinase catalytic domain (presumed) CEQ12_RS08765 SM00479 CEQ12_RS08765 CEQ12_RS08805 SM00387 Histidine kinase-like ATPases CEQ12_RS08810 SM00421 helix_turn_helix, Lux Regulon CEQ12_RS08810 SM00448 cheY-homologous receiver domain CEQ12_RS08825 SM00226 Low molecular weight phosphatase family CEQ12_RS08890 SM00478 endonuclease III CEQ12_RS08890 SM00525 CEQ12_RS08890 CEQ12_RS08900 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS09080 SM00062 Bacterial periplasmic substrate-binding proteins CEQ12_RS09080 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. CEQ12_RS09085 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS09090 SM00567 E-Z type HEAT repeats CEQ12_RS09130 SM00421 helix_turn_helix, Lux Regulon CEQ12_RS09130 SM00448 cheY-homologous receiver domain CEQ12_RS09155 SM00974 CEQ12_RS09155 CEQ12_RS09180 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS09230 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS09315 SM01234 CEQ12_RS09315 CEQ12_RS09390 SM00047 Lysozyme subfamily 2 CEQ12_RS09450 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ12_RS09465 SM00450 Rhodanese Homology Domain CEQ12_RS09480 SM00363 S4 RNA-binding domain CEQ12_RS09510 SM00849 Metallo-beta-lactamase superfamily CEQ12_RS09540 SM00843 CEQ12_RS09540 CEQ12_RS09560 SM00830 Chorismate mutase type II CEQ12_RS09565 SM00354 helix_turn _helix lactose operon repressor CEQ12_RS09595 SM00363 S4 RNA-binding domain CEQ12_RS09600 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEQ12_RS09605 SM00563 Phosphate acyltransferases CEQ12_RS09645 SM00363 S4 RNA-binding domain CEQ12_RS09645 SM01390 CEQ12_RS09645 CEQ12_RS09670 SM00981 CEQ12_RS09670 CEQ12_RS09715 SM01002 Alanine dehydrogenase/PNT, C-terminal domain CEQ12_RS09715 SM01003 Alanine dehydrogenase/PNT, N-terminal domain CEQ12_RS09730 SM00849 Metallo-beta-lactamase superfamily CEQ12_RS09740 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ12_RS09750 SM00481 DNA polymerase alpha chain like domain CEQ12_RS09755 SM00919 Malic enzyme, NAD binding domain CEQ12_RS09755 SM01274 CEQ12_RS09755 CEQ12_RS09790 SM01329 CEQ12_RS09790 CEQ12_RS09795 SM00448 cheY-homologous receiver domain CEQ12_RS09795 SM00862 Transcriptional regulatory protein, C terminal CEQ12_RS09800 SM00387 Histidine kinase-like ATPases CEQ12_RS09800 SM00388 His Kinase A (phosphoacceptor) domain CEQ12_RS09805 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CEQ12_RS09805 SM00474 3'-5' exonuclease CEQ12_RS09805 SM00475 5'-3' exonuclease CEQ12_RS09805 SM00482 DNA polymerase A domain CEQ12_RS09810 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain CEQ12_RS09810 SM01232 CEQ12_RS09810 CEQ12_RS09820 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CEQ12_RS09840 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEQ12_RS09880 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS09880 SM00994 ClpX C4-type zinc finger CEQ12_RS09880 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ12_RS09910 SM01004 Delta-aminolevulinic acid dehydratase CEQ12_RS10005 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ12_RS10010 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS10025 SM01323 CEQ12_RS10025 CEQ12_RS10045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ12_RS10045 SM00954 Region found in RelA / SpoT proteins CEQ12_RS10055 SM00287 Bacterial SH3 domain homologues CEQ12_RS10055 SM00646 CEQ12_RS10055 CEQ12_RS10080 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS10100 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS10115 SM00028 Tetratricopeptide repeats CEQ12_RS10120 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS10125 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain CEQ12_RS10135 SM00732 Likely ribonuclease with RNase H fold. CEQ12_RS10170 SM00796 Allophanate hydrolase subunit 1 CEQ12_RS10175 SM00797 Allophanate hydrolase subunit 2 CEQ12_RS10185 SM00878 Biotin carboxylase C-terminal domain CEQ12_RS10220 SM01103 CEQ12_RS10220 CEQ12_RS10230 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ12_RS10245 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ12_RS10255 SM00849 Metallo-beta-lactamase superfamily CEQ12_RS10270 SM00838 Elongation factor G C-terminus CEQ12_RS10275 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ12_RS10295 SM00271 DnaJ molecular chaperone homology domain CEQ12_RS10310 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ12_RS10370 SM00116 Domain in cystathionine beta-synthase and other proteins. CEQ12_RS10380 SM00400 zinc finger CEQ12_RS10380 SM00493 CEQ12_RS10380 CEQ12_RS10400 SM00487 DEAD-like helicases superfamily CEQ12_RS10400 SM00490 helicase superfamily c-terminal domain CEQ12_RS10405 SM00518 AP endonuclease family 2 CEQ12_RS10410 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS10465 SM00849 Metallo-beta-lactamase superfamily CEQ12_RS10525 SM00450 Rhodanese Homology Domain CEQ12_RS10550 SM00841 Elongation factor P, C-terminal CEQ12_RS10550 SM01185 CEQ12_RS10550 CEQ12_RS10560 SM00878 Biotin carboxylase C-terminal domain CEQ12_RS10615 SM00861 Transketolase, pyrimidine binding domain CEQ12_RS10640 SM01350 CEQ12_RS10640 CEQ12_RS10645 SM00642 Alpha-amylase domain CEQ12_RS10650 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS10650 SM00871 Bacterial transcription activator, effector binding domain CEQ12_RS10710 SM00363 S4 RNA-binding domain CEQ12_RS10715 SM00448 cheY-homologous receiver domain CEQ12_RS10715 SM00862 Transcriptional regulatory protein, C terminal CEQ12_RS10720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain CEQ12_RS10720 SM00387 Histidine kinase-like ATPases CEQ12_RS10720 SM00388 His Kinase A (phosphoacceptor) domain CEQ12_RS10740 SM00487 DEAD-like helicases superfamily CEQ12_RS10740 SM00490 helicase superfamily c-terminal domain CEQ12_RS10745 SM00257 Lysin motif CEQ12_RS10755 SM00870 CEQ12_RS10755 CEQ12_RS10765 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ12_RS10780 SM00411 bacterial (prokaryotic) histone like domain CEQ12_RS10800 SM00562 CEQ12_RS10800 CEQ12_RS10820 SM00028 Tetratricopeptide repeats CEQ12_RS10825 SM00914 CEQ12_RS10825 CEQ12_RS10860 SM00479 CEQ12_RS10860 CEQ12_RS10860 SM00491 CEQ12_RS10860 CEQ12_RS10875 SM00478 endonuclease III CEQ12_RS10915 SM00981 CEQ12_RS10915 CEQ12_RS10935 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs CEQ12_RS10935 SM00475 5'-3' exonuclease CEQ12_RS10960 SM00932 Scaffold protein Nfu/NifU N terminal CEQ12_RS10965 SM00567 E-Z type HEAT repeats CEQ12_RS10965 SM00932 Scaffold protein Nfu/NifU N terminal CEQ12_RS11010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEQ12_RS11010 SM00245 tail specific protease CEQ12_RS11025 SM00014 Acid phosphatase homologues CEQ12_RS11030 SM00448 cheY-homologous receiver domain CEQ12_RS11030 SM00862 Transcriptional regulatory protein, C terminal CEQ12_RS11035 SM00387 Histidine kinase-like ATPases CEQ12_RS11035 SM00388 His Kinase A (phosphoacceptor) domain CEQ12_RS11040 SM00861 Transketolase, pyrimidine binding domain CEQ12_RS11070 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS11080 SM00342 helix_turn_helix, arabinose operon control protein CEQ12_RS11125 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS11130 SM00327 von Willebrand factor (vWF) type A domain CEQ12_RS11160 SM00357 Cold shock protein domain CEQ12_RS11170 SM01005 Alanine racemase, C-terminal domain CEQ12_RS11190 SM01130 CEQ12_RS11190 CEQ12_RS11195 SM00859 Semialdehyde dehydrogenase, NAD binding domain CEQ12_RS11210 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS11235 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS11255 SM00422 helix_turn_helix, mercury resistance CEQ12_RS11365 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS11375 SM00354 helix_turn _helix lactose operon repressor CEQ12_RS11400 SM00434 DNA Topoisomerase IV CEQ12_RS11405 SM00387 Histidine kinase-like ATPases CEQ12_RS11405 SM00433 TopoisomeraseII CEQ12_RS11410 SM01207 CEQ12_RS11410 CEQ12_RS11470 SM00861 Transketolase, pyrimidine binding domain CEQ12_RS11495 SM01240 CEQ12_RS11495 CEQ12_RS11515 SM01060 CEQ12_RS11515 CEQ12_RS11570 SM00318 Staphylococcal nuclease homologues CEQ12_RS11590 SM01230 CEQ12_RS11590 CEQ12_RS11595 SM00422 helix_turn_helix, mercury resistance CEQ12_RS11655 SM00853 MutL C terminal dimerisation domain CEQ12_RS11655 SM01340 CEQ12_RS11655 CEQ12_RS11660 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CEQ12_RS11660 SM00534 ATPase domain of DNA mismatch repair MUTS family CEQ12_RS11675 SM00729 Elongator protein 3, MiaB family, Radical SAM CEQ12_RS11725 SM00322 K homology RNA-binding domain CEQ12_RS11725 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. CEQ12_RS11730 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS11735 SM00852 Probable molybdopterin binding domain CEQ12_RS11770 SM00866 CEQ12_RS11770 CEQ12_RS11775 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS11775 SM00843 CEQ12_RS11775 CEQ12_RS11780 SM00849 Metallo-beta-lactamase superfamily CEQ12_RS11785 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ12_RS11785 SM00322 K homology RNA-binding domain CEQ12_RS11790 SM01387 CEQ12_RS11790 CEQ12_RS11795 SM00904 Riboflavin kinase CEQ12_RS11835 SM00316 Ribosomal protein S1-like RNA-binding domain CEQ12_RS11835 SM00322 K homology RNA-binding domain CEQ12_RS11845 SM00479 CEQ12_RS11845 CEQ12_RS11845 SM00481 DNA polymerase alpha chain like domain CEQ12_RS11855 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. CEQ12_RS11895 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS11895 SM01086 C-terminal, D2-small domain, of ClpB protein CEQ12_RS11915 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain CEQ12_RS11915 SM00437 Bacterial DNA topoisomerase I DNA-binding domain CEQ12_RS11915 SM00493 CEQ12_RS11915 CEQ12_RS11925 SM00881 CoA binding domain CEQ12_RS11985 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS11985 SM00962 SRP54-type protein, GTPase domain CEQ12_RS11985 SM00963 SRP54-type protein, helical bundle domain CEQ12_RS11995 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS11995 SM00962 SRP54-type protein, GTPase domain CEQ12_RS11995 SM00963 SRP54-type protein, helical bundle domain CEQ12_RS12000 SM00968 SMC proteins Flexible Hinge Domain CEQ12_RS12005 SM00358 Double-stranded RNA binding motif CEQ12_RS12005 SM00535 Ribonuclease III family CEQ12_RS12015 SM00822 CEQ12_RS12015 CEQ12_RS12020 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. CEQ12_RS12040 SM00487 DEAD-like helicases superfamily CEQ12_RS12040 SM00490 helicase superfamily c-terminal domain CEQ12_RS12055 SM01120 CEQ12_RS12055 CEQ12_RS12055 SM01121 CEQ12_RS12055 CEQ12_RS12070 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain CEQ12_RS12085 SM00220 Serine/Threonine protein kinases, catalytic domain CEQ12_RS12085 SM00740 CEQ12_RS12085 CEQ12_RS12090 SM00331 Sigma factor PP2C-like phosphatases CEQ12_RS12090 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain CEQ12_RS12125 SM00487 DEAD-like helicases superfamily CEQ12_RS12125 SM00490 helicase superfamily c-terminal domain CEQ12_RS12135 SM01409 CEQ12_RS12135 CEQ12_RS12140 SM00072 Guanylate kinase homologues. CEQ12_RS12175 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family CEQ12_RS12180 SM00851 MGS-like domain CEQ12_RS12180 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CEQ12_RS12180 SM01209 CEQ12_RS12180 CEQ12_RS12185 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain CEQ12_RS12210 SM00363 S4 RNA-binding domain CEQ12_RS12235 SM00363 S4 RNA-binding domain CEQ12_RS12260 SM00864 Tubulin/FtsZ family, GTPase domain CEQ12_RS12260 SM00865 Tubulin/FtsZ family, C-terminal domain CEQ12_RS12265 SM00842 Cell division protein FtsA CEQ12_RS12285 SM00740 CEQ12_RS12285 CEQ12_RS12370 SM00465 GIY-YIG type nucleases (URI domain) CEQ12_RS12380 SM00463 Small MutS-related domain CEQ12_RS12380 SM00533 DNA-binding domain of DNA mismatch repair MUTS family CEQ12_RS12380 SM00534 ATPase domain of DNA mismatch repair MUTS family CEQ12_RS12385 SM00278 Helix-hairpin-helix DNA-binding motif class 1 CEQ12_RS12385 SM00481 DNA polymerase alpha chain like domain CEQ12_RS12385 SM00483 DNA polymerase X family CEQ12_RS12405 SM00873 B3/4 domain CEQ12_RS12405 SM00874 tRNA synthetase B5 domain CEQ12_RS12405 SM00896 Ferredoxin-fold anticodon binding domain CEQ12_RS12415 SM00967 RNA 2'-O ribose methyltransferase substrate binding CEQ12_RS12480 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS12500 SM00878 Biotin carboxylase C-terminal domain CEQ12_RS12525 SM00838 Elongation factor G C-terminus CEQ12_RS12575 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS12580 SM00530 Helix-turn-helix XRE-family like proteins CEQ12_RS12600 SM00861 Transketolase, pyrimidine binding domain CEQ12_RS12630 SM00849 Metallo-beta-lactamase superfamily CEQ12_RS12685 SM00382 ATPases associated with a variety of cellular activities CEQ12_RS12695 SM01209 CEQ12_RS12695 CEQ12_RS12695 SM01210 CEQ12_RS12695 CEQ12_RS12700 SM00798 AICARFT/IMPCHase bienzyme CEQ12_RS12700 SM00851 MGS-like domain CEQ12_RS12725 SM01211 CEQ12_RS12725 CEQ12_RS12745 SM01001 AIR carboxylase CEQ12_RS12810 SM00047 Lysozyme subfamily 2 CEQ12_RS12810 SM00644 CEQ12_RS12810 CEQ12_RS12815 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS12830 SM00347 helix_turn_helix multiple antibiotic resistance protein CEQ12_RS12890 SM00914 CEQ12_RS12890 CEQ12_RS12925 SM00419 helix_turn_helix, cAMP Regulatory protein CEQ12_RS12930 SM00650 Ribosomal RNA adenine dimethylases