locus-tag class description KB228_RS00005 PF00308 Bacterial dnaA protein KB228_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix KB228_RS00005 PF11638 DnaA N-terminal domain KB228_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain KB228_RS00010 PF02767 DNA polymerase III beta subunit, central domain KB228_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain KB228_RS00020 PF02463 RecF/RecN/SMC N terminal domain KB228_RS00025 PF00204 DNA gyrase B KB228_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus KB228_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS00025 PF01751 Toprim domain KB228_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller KB228_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A KB228_RS00035 PF01256 Carbohydrate kinase KB228_RS00040 PF02403 Seryl-tRNA synthetase N-terminal domain KB228_RS00040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KB228_RS00045 PF03372 Endonuclease/Exonuclease/phosphatase family KB228_RS00060 PF00561 alpha/beta hydrolase fold KB228_RS00070 PF01368 DHH family KB228_RS00070 PF02272 DHHA1 domain KB228_RS00075 PF03948 Ribosomal protein L9, C-terminal domain KB228_RS00075 PF01281 Ribosomal protein L9, N-terminal domain KB228_RS00080 PF00772 DnaB-like helicase N terminal domain KB228_RS00080 PF03796 DnaB-like helicase C terminal domain KB228_RS00085 PF00709 Adenylosuccinate synthetase KB228_RS00100 PF00072 Response regulator receiver domain KB228_RS00100 PF00486 Transcriptional regulatory protein, C terminal KB228_RS00105 PF00512 His Kinase A (phospho-acceptor) domain KB228_RS00105 PF00989 PAS fold KB228_RS00105 PF00672 HAMP domain KB228_RS00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS00110 PF07435 YycH protein KB228_RS00120 PF00753 Metallo-beta-lactamase superfamily KB228_RS00125 PF02590 Predicted SPOUT methyltransferase KB228_RS00130 PF16123 Hydroxyacylglutathione hydrolase C-terminus KB228_RS00130 PF00753 Metallo-beta-lactamase superfamily KB228_RS00135 PF13686 DsrE/DsrF/DrsH-like family KB228_RS00140 PF02583 Metal-sensitive transcriptional repressor KB228_RS00145 PF01925 Sulfite exporter TauE/SafE KB228_RS00150 PF01451 Low molecular weight phosphotyrosine protein phosphatase KB228_RS00155 PF02040 Arsenical pump membrane protein KB228_RS00160 PF01022 Bacterial regulatory protein, arsR family KB228_RS00165 PF02374 Anion-transporting ATPase KB228_RS00170 PF06953 Arsenical resistance operon trans-acting repressor ArsD KB228_RS00175 PF01022 Bacterial regulatory protein, arsR family KB228_RS00180 PF03773 Predicted permease KB228_RS00185 PF04507 Csa1 family KB228_RS00190 PF04507 Csa1 family KB228_RS00195 PF00924 Mechanosensitive ion channel KB228_RS00200 PF05116 Sucrose-6F-phosphate phosphohydrolase KB228_RS00230 PF01207 Dihydrouridine synthase (Dus) KB228_RS00235 PF06039 Malate:quinone oxidoreductase (Mqo) KB228_RS00250 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family KB228_RS00255 PF07690 Major Facilitator Superfamily KB228_RS00260 PF12833 Helix-turn-helix domain KB228_RS00260 PF00072 Response regulator receiver domain KB228_RS00265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS00265 PF06580 Histidine kinase KB228_RS00290 PF04650 YSIRK type signal peptide KB228_RS00290 PF17041 E domain KB228_RS00290 PF00746 LPXTG cell wall anchor motif KB228_RS00290 PF07501 G5 domain KB228_RS00290 PF17041 E domain KB228_RS00290 PF00746 LPXTG cell wall anchor motif KB228_RS00290 PF07501 G5 domain KB228_RS00290 PF04650 YSIRK type signal peptide KB228_RS00305 PF00202 Aminotransferase class-III KB228_RS00310 PF00155 Aminotransferase class I and II KB228_RS00315 PF03744 6-carboxyhexanoate--CoA ligase KB228_RS00325 PF05543 Staphopain peptidase C47 KB228_RS00325 PF14731 Staphopain proregion KB228_RS00330 PF04650 YSIRK type signal peptide KB228_RS00335 PF04507 Csa1 family KB228_RS00340 PF02492 CobW/HypB/UreG, nucleotide-binding domain KB228_RS00340 PF07683 Cobalamin synthesis protein cobW C-terminal domain KB228_RS00360 PF02424 ApbE family KB228_RS00365 PF00890 FAD binding domain KB228_RS00365 PF04205 FMN-binding domain KB228_RS00365 PF03358 NADPH-dependent FMN reductase KB228_RS00370 PF07690 Major Facilitator Superfamily KB228_RS00380 PF00005 ABC transporter KB228_RS00400 PF10100 Staphylopine dehydrogenase KB228_RS00405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KB228_RS00410 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS00415 PF12911 N-terminal TM domain of oligopeptide transport permease C KB228_RS00415 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS00420 PF00005 ABC transporter KB228_RS00425 PF00005 ABC transporter KB228_RS00430 PF07690 Major Facilitator Superfamily KB228_RS00435 PF02901 Pyruvate formate lyase-like KB228_RS00435 PF01228 Glycine radical KB228_RS00440 PF04055 Radical SAM superfamily KB228_RS00445 PF07687 Peptidase dimerisation domain KB228_RS00445 PF01546 Peptidase family M20/M25/M40 KB228_RS00450 PF05525 Branched-chain amino acid transport protein KB228_RS00455 PF17932 Tetracyclin repressor-like, C-terminal domain KB228_RS00455 PF00440 Bacterial regulatory proteins, tetR family KB228_RS00460 PF05853 beta-keto acid cleavage enzyme KB228_RS00465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KB228_RS00465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KB228_RS00475 PF00005 ABC transporter KB228_RS00475 PF00571 CBS domain KB228_RS00480 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS00485 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KB228_RS00490 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS00495 PF01476 LysM domain KB228_RS00495 PF00756 Putative esterase KB228_RS00500 PF03606 C4-dicarboxylate anaerobic carrier KB228_RS00505 PF00696 Amino acid kinase family KB228_RS00510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KB228_RS00510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KB228_RS00525 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) KB228_RS00530 PF06968 Biotin and Thiamin Synthesis associated domain KB228_RS00530 PF04055 Radical SAM superfamily KB228_RS00535 PF00465 Iron-containing alcohol dehydrogenase KB228_RS00540 PF02733 Dak1 domain KB228_RS00545 PF02734 DAK2 domain KB228_RS00550 PF03610 PTS system fructose IIA component KB228_RS00565 PF07690 Major Facilitator Superfamily KB228_RS00580 PF00501 AMP-binding enzyme KB228_RS00580 PF13193 AMP-binding enzyme C-terminal domain KB228_RS00580 PF00668 Condensation domain KB228_RS00580 PF00550 Phosphopantetheine attachment site KB228_RS00580 PF00975 Thioesterase domain KB228_RS00590 PF04650 YSIRK type signal peptide KB228_RS00595 PF00083 Sugar (and other) transporter KB228_RS00610 PF00892 EamA-like transporter family KB228_RS00615 PF09084 NMT1/THI5 like KB228_RS00620 PF00939 Sodium:sulfate symporter transmembrane region KB228_RS00625 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KB228_RS00625 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS00630 PF00676 Dehydrogenase E1 component KB228_RS00635 PF02779 Transketolase, pyrimidine binding domain KB228_RS00635 PF02780 Transketolase, C-terminal domain KB228_RS00640 PF00364 Biotin-requiring enzyme KB228_RS00640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KB228_RS00640 PF02817 e3 binding domain KB228_RS00655 PF02028 BCCT, betaine/carnitine/choline family transporter KB228_RS00665 PF01470 Pyroglutamyl peptidase KB228_RS00670 PF12368 Rhodanase C-terminal KB228_RS00670 PF17773 UPF0176 acylphosphatase like domain KB228_RS00670 PF00581 Rhodanese-like domain KB228_RS00675 PF08450 SMP-30/Gluconolactonase/LRE-like region KB228_RS00680 PF04264 YceI-like domain KB228_RS00685 PF06039 Malate:quinone oxidoreductase (Mqo) KB228_RS00695 PF13393 Histidyl-tRNA synthetase KB228_RS00700 PF01634 ATP phosphoribosyltransferase KB228_RS00705 PF00815 Histidinol dehydrogenase KB228_RS00710 PF00475 Imidazoleglycerol-phosphate dehydratase KB228_RS00715 PF00117 Glutamine amidotransferase class-I KB228_RS00720 PF00977 Histidine biosynthesis protein KB228_RS00725 PF00977 Histidine biosynthesis protein KB228_RS00730 PF01502 Phosphoribosyl-AMP cyclohydrolase KB228_RS00730 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KB228_RS00735 PF00797 N-acetyltransferase KB228_RS00740 PF04650 YSIRK type signal peptide KB228_RS00755 PF07690 Major Facilitator Superfamily KB228_RS00760 PF00149 Calcineurin-like phosphoesterase KB228_RS00760 PF02872 5'-nucleotidase, C-terminal domain KB228_RS00775 PF00005 ABC transporter KB228_RS00780 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS00785 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS00795 PF00746 LPXTG cell wall anchor motif KB228_RS00800 PF00344 SecY translocase KB228_RS00805 PF16993 Accessory Sec system protein Asp1 KB228_RS00810 PF16929 Accessory Sec system GspB-transporter KB228_RS00820 PF07516 SecA Wing and Scaffold domain KB228_RS00820 PF07517 SecA DEAD-like domain KB228_RS00820 PF01043 SecA preprotein cross-linking domain KB228_RS00825 PF00534 Glycosyl transferases group 1 KB228_RS00840 PF01641 SelR domain KB228_RS00840 PF01625 Peptide methionine sulfoxide reductase KB228_RS00850 PF07690 Major Facilitator Superfamily KB228_RS00870 PF02566 OsmC-like protein KB228_RS00875 PF01468 GA module KB228_RS00880 PF05257 CHAP domain KB228_RS00880 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KB228_RS00885 PF01061 ABC-2 type transporter KB228_RS00890 PF01238 Phosphomannose isomerase type I KB228_RS00895 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KB228_RS00895 PF02378 Phosphotransferase system, EIIC KB228_RS00895 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KB228_RS00900 PF08279 HTH domain KB228_RS00900 PF05043 Mga helix-turn-helix domain KB228_RS00900 PF00874 PRD domain KB228_RS00900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KB228_RS00935 PF01546 Peptidase family M20/M25/M40 KB228_RS00935 PF07687 Peptidase dimerisation domain KB228_RS00940 PF02868 Thermolysin metallopeptidase, alpha-helical domain KB228_RS00940 PF01447 Thermolysin metallopeptidase, catalytic domain KB228_RS00940 PF03413 Peptidase propeptide and YPEB domain KB228_RS00940 PF07504 Fungalysin/Thermolysin Propeptide Motif KB228_RS00945 PF02863 Arginine repressor, C-terminal domain KB228_RS00945 PF01316 Arginine repressor, DNA binding domain KB228_RS00955 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KB228_RS00955 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KB228_RS00960 PF13520 Amino acid permease KB228_RS00965 PF00027 Cyclic nucleotide-binding domain KB228_RS00965 PF13545 Crp-like helix-turn-helix domain KB228_RS00975 PF09587 Bacterial capsule synthesis protein PGA_cap KB228_RS00980 PF00205 Thiamine pyrophosphate enzyme, central domain KB228_RS00980 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KB228_RS00980 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KB228_RS00990 PF01797 Transposase IS200 like KB228_RS01005 PF02796 Helix-turn-helix domain of resolvase KB228_RS01005 PF00239 Resolvase, N terminal domain KB228_RS01015 PF00916 Sulfate permease family KB228_RS01015 PF01740 STAS domain KB228_RS01030 PF05908 Poly-gamma-glutamate hydrolase KB228_RS01040 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KB228_RS01045 PF11066 Protein of unknown function (DUF2867) KB228_RS01045 PF13460 NAD(P)H-binding KB228_RS01050 PF00245 Alkaline phosphatase KB228_RS01060 PF00486 Transcriptional regulatory protein, C terminal KB228_RS01060 PF00072 Response regulator receiver domain KB228_RS01065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS01070 PF00005 ABC transporter KB228_RS01085 PF00474 Sodium:solute symporter family KB228_RS01110 PF01047 MarR family KB228_RS01115 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KB228_RS01115 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS01120 PF00255 Glutathione peroxidase KB228_RS01125 PF01507 Phosphoadenosine phosphosulfate reductase family KB228_RS01130 PF00667 FAD binding domain KB228_RS01130 PF00258 Flavodoxin KB228_RS01130 PF00175 Oxidoreductase NAD-binding domain KB228_RS01135 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KB228_RS01135 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KB228_RS01140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KB228_RS01145 PF14824 Sirohaem biosynthesis protein central KB228_RS01150 PF01925 Sulfite exporter TauE/SafE KB228_RS01155 PF14306 PUA-like domain KB228_RS01155 PF01747 ATP-sulfurylase KB228_RS01170 PF13597 Anaerobic ribonucleoside-triphosphate reductase KB228_RS01170 PF03477 ATP cone domain KB228_RS01180 PF03605 Anaerobic c4-dicarboxylate membrane transporter KB228_RS01185 PF02028 BCCT, betaine/carnitine/choline family transporter KB228_RS01195 PF00171 Aldehyde dehydrogenase family KB228_RS01200 PF05199 GMC oxidoreductase KB228_RS01200 PF00732 GMC oxidoreductase KB228_RS01205 PF07687 Peptidase dimerisation domain KB228_RS01205 PF01546 Peptidase family M20/M25/M40 KB228_RS01220 PF13193 AMP-binding enzyme C-terminal domain KB228_RS01220 PF00501 AMP-binding enzyme KB228_RS01225 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KB228_RS01225 PF02896 PEP-utilising enzyme, TIM barrel domain KB228_RS01225 PF00391 PEP-utilising enzyme, mobile domain KB228_RS01230 PF03618 Kinase/pyrophosphorylase KB228_RS01235 PF06039 Malate:quinone oxidoreductase (Mqo) KB228_RS01245 PF00274 Fructose-bisphosphate aldolase class-I KB228_RS01250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KB228_RS01250 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS01275 PF00202 Aminotransferase class-III KB228_RS01280 PF13520 Amino acid permease KB228_RS01285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KB228_RS01285 PF03466 LysR substrate binding domain KB228_RS01290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KB228_RS01290 PF00056 lactate/malate dehydrogenase, NAD binding domain KB228_RS01295 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KB228_RS01295 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KB228_RS01295 PF00205 Thiamine pyrophosphate enzyme, central domain KB228_RS01300 PF03306 Alpha-acetolactate decarboxylase KB228_RS01305 PF08546 Ketopantoate reductase PanE/ApbA C terminal KB228_RS01305 PF02558 Ketopantoate reductase PanE/ApbA KB228_RS01310 PF02548 Ketopantoate hydroxymethyltransferase KB228_RS01315 PF02569 Pantoate-beta-alanine ligase KB228_RS01320 PF02261 Aspartate decarboxylase KB228_RS01335 PF02677 Epoxyqueuosine reductase QueH KB228_RS01350 PF01180 Dihydroorotate dehydrogenase KB228_RS01355 PF03881 Fructosamine kinase KB228_RS01360 PF00324 Amino acid permease KB228_RS01370 PF03976 Polyphosphate kinase 2 (PPK2) KB228_RS01375 PF06737 Transglycosylase-like domain KB228_RS01380 PF01757 Acyltransferase family KB228_RS01385 PF05257 CHAP domain KB228_RS01390 PF00155 Aminotransferase class I and II KB228_RS01400 PF00403 Heavy-metal-associated domain KB228_RS01405 PF00403 Heavy-metal-associated domain KB228_RS01420 PF00171 Aldehyde dehydrogenase family KB228_RS01430 PF07670 Nucleoside recognition KB228_RS01430 PF07664 Ferrous iron transport protein B C terminus KB228_RS01430 PF17910 FeoB cytosolic helical domain KB228_RS01430 PF02421 Ferrous iron transport protein B KB228_RS01445 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KB228_RS01445 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KB228_RS01450 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal KB228_RS01450 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal KB228_RS01455 PF00368 Hydroxymethylglutaryl-coenzyme A reductase KB228_RS01470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KB228_RS01470 PF03466 LysR substrate binding domain KB228_RS01475 PF03788 LrgA family KB228_RS01480 PF04172 LrgB-like family KB228_RS01485 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KB228_RS01485 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KB228_RS01485 PF00205 Thiamine pyrophosphate enzyme, central domain KB228_RS01490 PF00367 phosphotransferase system, EIIB KB228_RS01490 PF02378 Phosphotransferase system, EIIC KB228_RS01490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KB228_RS01500 PF08240 Alcohol dehydrogenase GroES-like domain KB228_RS01500 PF13823 Alcohol dehydrogenase GroES-associated KB228_RS01500 PF00107 Zinc-binding dehydrogenase KB228_RS01510 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KB228_RS01510 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KB228_RS01525 PF08245 Mur ligase middle domain KB228_RS01530 PF14102 Capsule biosynthesis CapC KB228_RS01535 PF09587 Bacterial capsule synthesis protein PGA_cap KB228_RS01550 PF06800 Sugar transport protein KB228_RS01555 PF05025 RbsD / FucU transport protein family KB228_RS01560 PF00294 pfkB family carbohydrate kinase KB228_RS01565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KB228_RS01565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KB228_RS01580 PF01842 ACT domain KB228_RS01580 PF03315 Serine dehydratase beta chain KB228_RS01585 PF03313 Serine dehydratase alpha chain KB228_RS01605 PF04203 Sortase domain KB228_RS01625 PF00881 Nitroreductase family KB228_RS01630 PF00171 Aldehyde dehydrogenase family KB228_RS01640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KB228_RS01655 PF00171 Aldehyde dehydrogenase family KB228_RS01670 PF06874 Firmicute fructose-1,6-bisphosphatase KB228_RS01675 PF09335 SNARE associated Golgi protein KB228_RS01680 PF00899 ThiF family KB228_RS01685 PF05690 Thiazole biosynthesis protein ThiG KB228_RS01695 PF01266 FAD dependent oxidoreductase KB228_RS01705 PF07690 Major Facilitator Superfamily KB228_RS01720 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KB228_RS01725 PF04607 Region found in RelA / SpoT proteins KB228_RS01735 PF00561 alpha/beta hydrolase fold KB228_RS01740 PF13411 MerR HTH family regulatory protein KB228_RS01745 PF07690 Major Facilitator Superfamily KB228_RS01750 PF00392 Bacterial regulatory proteins, gntR family KB228_RS01750 PF07729 FCD domain KB228_RS01755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KB228_RS01755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KB228_RS01760 PF02447 GntP family permease KB228_RS01765 PF00483 Nucleotidyl transferase KB228_RS01770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KB228_RS01770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KB228_RS01770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KB228_RS01770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KB228_RS01775 PF00534 Glycosyl transferases group 1 KB228_RS01775 PF09318 Glycosyl transferase 1 domain A KB228_RS01780 PF02976 DNA mismatch repair enzyme MutH KB228_RS01785 PF00145 C-5 cytosine-specific DNA methylase KB228_RS01800 PF00106 short chain dehydrogenase KB228_RS01805 PF01546 Peptidase family M20/M25/M40 KB228_RS01805 PF07687 Peptidase dimerisation domain KB228_RS01810 PF13089 Polyphosphate kinase N-terminal domain KB228_RS01810 PF17941 Polyphosphate kinase C-terminal domain 1 KB228_RS01810 PF13090 Polyphosphate kinase C-terminal domain 2 KB228_RS01810 PF02503 Polyphosphate kinase middle domain KB228_RS01815 PF02541 Ppx/GppA phosphatase family KB228_RS01830 PF05343 M42 glutamyl aminopeptidase KB228_RS01835 PF06998 Protein of unknown function (DUF1307) KB228_RS01840 PF01645 Conserved region in glutamate synthase KB228_RS01860 PF00005 ABC transporter KB228_RS01865 PF03649 Uncharacterised protein family (UPF0014) KB228_RS01870 PF07690 Major Facilitator Superfamily KB228_RS01875 PF00135 Carboxylesterase family KB228_RS01880 PF13520 Amino acid permease KB228_RS01890 PF00107 Zinc-binding dehydrogenase KB228_RS01890 PF08240 Alcohol dehydrogenase GroES-like domain KB228_RS01895 PF00005 ABC transporter KB228_RS01895 PF00571 CBS domain KB228_RS01900 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS01905 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KB228_RS01910 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS01915 PF04172 LrgB-like family KB228_RS01920 PF03788 LrgA family KB228_RS01925 PF04397 LytTr DNA-binding domain KB228_RS01925 PF00072 Response regulator receiver domain KB228_RS01930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS01930 PF13492 GAF domain KB228_RS01930 PF07694 5TMR of 5TMR-LYT KB228_RS01930 PF06580 Histidine kinase KB228_RS01935 PF07690 Major Facilitator Superfamily KB228_RS01940 PF02558 Ketopantoate reductase PanE/ApbA KB228_RS01940 PF08546 Ketopantoate reductase PanE/ApbA C terminal KB228_RS01945 PF02096 60Kd inner membrane protein KB228_RS01955 PF13520 Amino acid permease KB228_RS01960 PF00324 Amino acid permease KB228_RS01975 PF07690 Major Facilitator Superfamily KB228_RS01985 PF02595 Glycerate kinase family KB228_RS02000 PF01545 Cation efflux family KB228_RS02000 PF16916 Dimerisation domain of Zinc Transporter KB228_RS02005 PF00300 Histidine phosphatase superfamily (branch 1) KB228_RS02015 PF00497 Bacterial extracellular solute-binding proteins, family 3 KB228_RS02020 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS02025 PF00005 ABC transporter KB228_RS02035 PF02388 FemAB family KB228_RS02055 PF01226 Formate/nitrite transporter KB228_RS02060 PF00583 Acetyltransferase (GNAT) family KB228_RS02070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KB228_RS02080 PF04324 BFD-like [2Fe-2S] binding domain KB228_RS02080 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KB228_RS02080 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS02080 PF18267 Rubredoxin NAD+ reductase C-terminal domain KB228_RS02080 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KB228_RS02085 PF00355 Rieske [2Fe-2S] domain KB228_RS02090 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KB228_RS02095 PF14710 Respiratory nitrate reductase alpha N-terminal KB228_RS02095 PF01568 Molydopterin dinucleotide binding domain KB228_RS02095 PF00384 Molybdopterin oxidoreductase KB228_RS02100 PF14711 Respiratory nitrate reductase beta C-terminal KB228_RS02100 PF13247 4Fe-4S dicluster domain KB228_RS02110 PF02665 Nitrate reductase gamma subunit KB228_RS02120 PF07730 Histidine kinase KB228_RS02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS02125 PF00072 Response regulator receiver domain KB228_RS02125 PF00196 Bacterial regulatory proteins, luxR family KB228_RS02130 PF07690 Major Facilitator Superfamily KB228_RS02135 PF01047 MarR family KB228_RS02140 PF00881 Nitroreductase family KB228_RS02150 PF00375 Sodium:dicarboxylate symporter family KB228_RS02160 PF16242 Pyridoxamine 5'-phosphate oxidase like KB228_RS02175 PF02378 Phosphotransferase system, EIIC KB228_RS02175 PF00367 phosphotransferase system, EIIB KB228_RS02210 PF00107 Zinc-binding dehydrogenase KB228_RS02210 PF08240 Alcohol dehydrogenase GroES-like domain KB228_RS02215 PF00583 Acetyltransferase (GNAT) family KB228_RS02220 PF00535 Glycosyl transferase family 2 KB228_RS02220 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KB228_RS02230 PF00535 Glycosyl transferase family 2 KB228_RS02230 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KB228_RS02235 PF02652 L-lactate permease KB228_RS02240 PF00534 Glycosyl transferases group 1 KB228_RS02240 PF13439 Glycosyltransferase Family 4 KB228_RS02245 PF06039 Malate:quinone oxidoreductase (Mqo) KB228_RS02250 PF00512 His Kinase A (phospho-acceptor) domain KB228_RS02250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS02250 PF00672 HAMP domain KB228_RS02255 PF00486 Transcriptional regulatory protein, C terminal KB228_RS02255 PF00072 Response regulator receiver domain KB228_RS02260 PF02687 FtsX-like permease family KB228_RS02265 PF00005 ABC transporter KB228_RS02275 PF12802 MarR family KB228_RS02280 PF13240 zinc-ribbon domain KB228_RS02285 PF07690 Major Facilitator Superfamily KB228_RS02300 PF07690 Major Facilitator Superfamily KB228_RS02310 PF00934 PE family KB228_RS02310 PF07859 alpha/beta hydrolase fold KB228_RS02325 PF01544 CorA-like Mg2+ transporter protein KB228_RS02330 PF01070 FMN-dependent dehydrogenase KB228_RS02335 PF03616 Sodium/glutamate symporter KB228_RS02355 PF02245 Methylpurine-DNA glycosylase (MPG) KB228_RS02365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KB228_RS02365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KB228_RS02370 PF01263 Aldose 1-epimerase KB228_RS02375 PF03473 MOSC domain KB228_RS02380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) KB228_RS02390 PF02517 CPBP intramembrane metalloprotease KB228_RS02395 PF00491 Arginase family KB228_RS02400 PF07687 Peptidase dimerisation domain KB228_RS02400 PF01546 Peptidase family M20/M25/M40 KB228_RS02410 PF01613 Flavin reductase like domain KB228_RS02440 PF01418 Helix-turn-helix domain, rpiR family KB228_RS02440 PF01380 SIS domain KB228_RS02445 PF00367 phosphotransferase system, EIIB KB228_RS02445 PF02378 Phosphotransferase system, EIIC KB228_RS02455 PF13419 Haloacid dehalogenase-like hydrolase KB228_RS02475 PF00324 Amino acid permease KB228_RS02485 PF00367 phosphotransferase system, EIIB KB228_RS02485 PF02378 Phosphotransferase system, EIIC KB228_RS02490 PF01380 SIS domain KB228_RS02505 PF02517 CPBP intramembrane metalloprotease KB228_RS02510 PF08279 HTH domain KB228_RS02510 PF13280 WYL domain KB228_RS02515 PF00459 Inositol monophosphatase family KB228_RS02520 PF03816 Cell envelope-related transcriptional attenuator domain KB228_RS02530 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KB228_RS02530 PF13457 GW (Gly-Tryp) dipeptide domain KB228_RS02535 PF01494 FAD binding domain KB228_RS02540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KB228_RS02540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KB228_RS02545 PF00893 Small Multidrug Resistance protein KB228_RS02550 PF00893 Small Multidrug Resistance protein KB228_RS02555 PF05257 CHAP domain KB228_RS02565 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain KB228_RS02565 PF02558 Ketopantoate reductase PanE/ApbA KB228_RS02570 PF03553 Na+/H+ antiporter family KB228_RS02575 PF05257 CHAP domain KB228_RS02600 PF01774 UreD urease accessory protein KB228_RS02605 PF02492 CobW/HypB/UreG, nucleotide-binding domain KB228_RS02610 PF01730 UreF KB228_RS02615 PF05194 UreE urease accessory protein, C-terminal domain KB228_RS02615 PF02814 UreE urease accessory protein, N-terminal domain KB228_RS02620 PF00449 Urease alpha-subunit, N-terminal domain KB228_RS02620 PF01979 Amidohydrolase family KB228_RS02625 PF00699 Urease beta subunit KB228_RS02630 PF00547 Urease, gamma subunit KB228_RS02640 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KB228_RS02640 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KB228_RS02640 PF02770 Acyl-CoA dehydrogenase, middle domain KB228_RS02645 PF01156 Inosine-uridine preferring nucleoside hydrolase KB228_RS02650 PF02632 BioY family KB228_RS02670 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS02675 PF00005 ABC transporter KB228_RS02675 PF03459 TOBE domain KB228_RS02680 PF00899 ThiF family KB228_RS02685 PF00994 Probable molybdopterin binding domain KB228_RS02690 PF01967 MoaC family KB228_RS02695 PF03453 MoeA N-terminal region (domain I and II) KB228_RS02695 PF03454 MoeA C-terminal region (domain IV) KB228_RS02695 PF00994 Probable molybdopterin binding domain KB228_RS02705 PF02391 MoaE protein KB228_RS02710 PF02597 ThiS family KB228_RS02715 PF12804 MobA-like NTP transferase domain KB228_RS02720 PF06463 Molybdenum Cofactor Synthesis C KB228_RS02720 PF04055 Radical SAM superfamily KB228_RS02725 PF01047 MarR family KB228_RS02745 PF01047 MarR family KB228_RS02755 PF02388 FemAB family KB228_RS02760 PF00873 AcrB/AcrD/AcrF family KB228_RS02785 PF06800 Sugar transport protein KB228_RS02790 PF01751 Toprim domain KB228_RS02790 PF01131 DNA topoisomerase KB228_RS02795 PF00860 Permease family KB228_RS02805 PF00338 Ribosomal protein S10p/S20e KB228_RS02810 PF00297 Ribosomal protein L3 KB228_RS02815 PF00573 Ribosomal protein L4/L1 family KB228_RS02820 PF00276 Ribosomal protein L23 KB228_RS02825 PF03947 Ribosomal Proteins L2, C-terminal domain KB228_RS02825 PF00181 Ribosomal Proteins L2, RNA binding domain KB228_RS02830 PF00203 Ribosomal protein S19 KB228_RS02835 PF00237 Ribosomal protein L22p/L17e KB228_RS02840 PF07650 KH domain KB228_RS02840 PF00189 Ribosomal protein S3, C-terminal domain KB228_RS02845 PF00252 Ribosomal protein L16p/L10e KB228_RS02850 PF00831 Ribosomal L29 protein KB228_RS02855 PF00366 Ribosomal protein S17 KB228_RS02860 PF00238 Ribosomal protein L14p/L23e KB228_RS02865 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KB228_RS02865 PF00467 KOW motif KB228_RS02870 PF00673 ribosomal L5P family C-terminus KB228_RS02870 PF00281 Ribosomal protein L5 KB228_RS02875 PF00253 Ribosomal protein S14p/S29e KB228_RS02880 PF00410 Ribosomal protein S8 KB228_RS02885 PF00347 Ribosomal protein L6 KB228_RS02890 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KB228_RS02895 PF00333 Ribosomal protein S5, N-terminal domain KB228_RS02895 PF03719 Ribosomal protein S5, C-terminal domain KB228_RS02900 PF00327 Ribosomal protein L30p/L7e KB228_RS02905 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KB228_RS02910 PF00344 SecY translocase KB228_RS02915 PF05191 Adenylate kinase, active site lid KB228_RS02920 PF01176 Translation initiation factor 1A / IF-1 KB228_RS02925 PF00444 Ribosomal protein L36 KB228_RS02930 PF00416 Ribosomal protein S13/S18 KB228_RS02935 PF00411 Ribosomal protein S11 KB228_RS02940 PF01000 RNA polymerase Rpb3/RpoA insert domain KB228_RS02940 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KB228_RS02940 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KB228_RS02945 PF01196 Ribosomal protein L17 KB228_RS02950 PF00005 ABC transporter KB228_RS02955 PF00005 ABC transporter KB228_RS02960 PF02361 Cobalt transport protein KB228_RS02965 PF01416 tRNA pseudouridine synthase KB228_RS02970 PF00572 Ribosomal protein L13 KB228_RS02975 PF00380 Ribosomal protein S9/S16 KB228_RS02980 PF02146 Sir2 family KB228_RS02985 PF08220 DeoR-like helix-turn-helix domain KB228_RS02985 PF00455 DeoR C terminal sensor domain KB228_RS02990 PF02502 Ribose/Galactose Isomerase KB228_RS02995 PF02502 Ribose/Galactose Isomerase KB228_RS03000 PF00294 pfkB family carbohydrate kinase KB228_RS03005 PF01791 DeoC/LacD family aldolase KB228_RS03010 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KB228_RS03015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KB228_RS03015 PF02378 Phosphotransferase system, EIIC KB228_RS03020 PF00232 Glycosyl hydrolase family 1 KB228_RS03030 PF00296 Luciferase-like monooxygenase KB228_RS03035 PF16884 N-terminal domain of oxidoreductase KB228_RS03035 PF00107 Zinc-binding dehydrogenase KB228_RS03040 PF00107 Zinc-binding dehydrogenase KB228_RS03040 PF08240 Alcohol dehydrogenase GroES-like domain KB228_RS03055 PF03780 Asp23 family, cell envelope-related function KB228_RS03060 PF06276 Ferric iron reductase FhuF-like transporter KB228_RS03060 PF04183 IucA / IucC family KB228_RS03065 PF05977 Transmembrane secretion effector KB228_RS03070 PF06276 Ferric iron reductase FhuF-like transporter KB228_RS03070 PF04183 IucA / IucC family KB228_RS03075 PF01168 Alanine racemase, N-terminal domain KB228_RS03080 PF01497 Periplasmic binding protein KB228_RS03085 PF01032 FecCD transport family KB228_RS03090 PF01032 FecCD transport family KB228_RS03095 PF07670 Nucleoside recognition KB228_RS03100 PF03992 Antibiotic biosynthesis monooxygenase KB228_RS03110 PF04307 LexA-binding, inner membrane-associated putative hydrolase KB228_RS03115 PF01704 UTP--glucose-1-phosphate uridylyltransferase KB228_RS03125 PF07690 Major Facilitator Superfamily KB228_RS03130 PF17080 Multidrug Resistance efflux pump KB228_RS03135 PF07690 Major Facilitator Superfamily KB228_RS03140 PF10609 NUBPL iron-transfer P-loop NTPase KB228_RS03190 PF02457 DisA bacterial checkpoint controller nucleotide-binding KB228_RS03200 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KB228_RS03200 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KB228_RS03200 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KB228_RS03200 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KB228_RS03205 PF01380 SIS domain KB228_RS03225 PF01545 Cation efflux family KB228_RS03225 PF16916 Dimerisation domain of Zinc Transporter KB228_RS03230 PF01022 Bacterial regulatory protein, arsR family KB228_RS03235 PF13460 NAD(P)H-binding KB228_RS03240 PF01238 Phosphomannose isomerase type I KB228_RS03260 PF00210 Ferritin-like domain KB228_RS03265 PF01048 Phosphorylase superfamily KB228_RS03270 PF01791 DeoC/LacD family aldolase KB228_RS03275 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KB228_RS03275 PF00591 Glycosyl transferase family, a/b domain KB228_RS03275 PF02885 Glycosyl transferase family, helical bundle domain KB228_RS03280 PF01676 Metalloenzyme superfamily KB228_RS03290 PF02664 S-Ribosylhomocysteinase (LuxS) KB228_RS03310 PF03630 Fumble KB228_RS03320 PF05066 HB1, ASXL, restriction endonuclease HTH domain KB228_RS03325 PF00117 Glutamine amidotransferase class-I KB228_RS03325 PF06418 CTP synthase N-terminus KB228_RS03335 PF01116 Fructose-bisphosphate aldolase class-II KB228_RS03340 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KB228_RS03345 PF00171 Aldehyde dehydrogenase family KB228_RS03350 PF07497 Rho termination factor, RNA-binding domain KB228_RS03350 PF07498 Rho termination factor, N-terminal domain KB228_RS03350 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KB228_RS03355 PF01197 Ribosomal protein L31 KB228_RS03360 PF00265 Thymidine kinase KB228_RS03365 PF00472 RF-1 domain KB228_RS03365 PF03462 PCRF domain KB228_RS03370 PF17827 PrmC N-terminal domain KB228_RS03370 PF05175 Methyltransferase small domain KB228_RS03375 PF01300 Telomere recombination KB228_RS03375 PF03481 Putative GTP-binding controlling metal-binding KB228_RS03380 PF01451 Low molecular weight phosphotyrosine protein phosphatase KB228_RS03385 PF04260 Protein of unknown function (DUF436) KB228_RS03390 PF00464 Serine hydroxymethyltransferase KB228_RS03400 PF02350 UDP-N-acetylglucosamine 2-epimerase KB228_RS03410 PF00119 ATP synthase A chain KB228_RS03415 PF00137 ATP synthase subunit C KB228_RS03420 PF00430 ATP synthase B/B' CF(0) KB228_RS03425 PF00213 ATP synthase delta (OSCP) subunit KB228_RS03430 PF02874 ATP synthase alpha/beta family, beta-barrel domain KB228_RS03430 PF00306 ATP synthase alpha/beta chain, C terminal domain KB228_RS03430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KB228_RS03435 PF00231 ATP synthase KB228_RS03440 PF02874 ATP synthase alpha/beta family, beta-barrel domain KB228_RS03440 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KB228_RS03445 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KB228_RS03445 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KB228_RS03455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KB228_RS03460 PF07977 FabA-like domain KB228_RS03470 PF00436 Single-strand binding protein family KB228_RS03475 PF06737 Transglycosylase-like domain KB228_RS03480 PF03070 TENA/THI-4/PQQC family KB228_RS03485 PF08543 Phosphomethylpyrimidine kinase KB228_RS03490 PF02110 Hydroxyethylthiazole kinase family KB228_RS03495 PF02581 Thiamine monophosphate synthase KB228_RS03500 PF02096 60Kd inner membrane protein KB228_RS03505 PF01966 HD domain KB228_RS03510 PF13396 Phospholipase_D-nuclease N-terminal KB228_RS03510 PF13091 PLD-like domain KB228_RS03515 PF02583 Metal-sensitive transcriptional repressor KB228_RS03530 PF01098 Cell cycle protein KB228_RS03535 PF01820 D-ala D-ala ligase N-terminus KB228_RS03535 PF07478 D-ala D-ala ligase C-terminus KB228_RS03540 PF08245 Mur ligase middle domain KB228_RS03540 PF02875 Mur ligase family, glutamate ligase domain KB228_RS03540 PF01225 Mur ligase family, catalytic domain KB228_RS03545 PF00271 Helicase conserved C-terminal domain KB228_RS03545 PF00270 DEAD/DEAH box helicase KB228_RS03555 PF03703 Bacterial PH domain KB228_RS03560 PF03703 Bacterial PH domain KB228_RS03565 PF01648 4'-phosphopantetheinyl transferase superfamily KB228_RS03570 PF01168 Alanine racemase, N-terminal domain KB228_RS03570 PF00842 Alanine racemase, C-terminal domain KB228_RS03580 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KB228_RS03585 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain KB228_RS03585 PF07228 Stage II sporulation protein E (SpoIIE) KB228_RS03590 PF01740 STAS domain KB228_RS03595 PF13581 Histidine kinase-like ATPase domain KB228_RS03600 PF04542 Sigma-70 region 2 KB228_RS03600 PF04539 Sigma-70 region 3 KB228_RS03600 PF04545 Sigma-70, region 4 KB228_RS03605 PF00575 S1 RNA binding domain KB228_RS03605 PF09371 Tex-like protein N-terminal domain KB228_RS03605 PF16921 Tex protein YqgF-like domain KB228_RS03605 PF17674 HHH domain KB228_RS03610 PF10263 SprT-like family KB228_RS03640 PF00585 C-terminal regulatory domain of Threonine dehydratase KB228_RS03640 PF00291 Pyridoxal-phosphate dependent enzyme KB228_RS03645 PF00694 Aconitase C-terminal domain KB228_RS03650 PF00330 Aconitase family (aconitate hydratase) KB228_RS03655 PF00180 Isocitrate/isopropylmalate dehydrogenase KB228_RS03660 PF08502 LeuA allosteric (dimerisation) domain KB228_RS03660 PF00682 HMGL-like KB228_RS03665 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KB228_RS03665 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KB228_RS03675 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KB228_RS03675 PF00205 Thiamine pyrophosphate enzyme, central domain KB228_RS03675 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KB228_RS03680 PF00920 Dehydratase family KB228_RS03685 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KB228_RS03690 PF00814 Glycoprotease family KB228_RS03695 PF00583 Acetyltransferase (GNAT) family KB228_RS03700 PF00814 Glycoprotease family KB228_RS03705 PF00488 MutS domain V KB228_RS03705 PF01624 MutS domain I KB228_RS03705 PF05188 MutS domain II KB228_RS03705 PF05192 MutS domain III KB228_RS03705 PF05190 MutS family domain IV KB228_RS03710 PF00005 ABC transporter KB228_RS03710 PF16326 ABC transporter C-terminal domain KB228_RS03710 PF12848 ABC transporter KB228_RS03715 PF02629 CoA binding domain KB228_RS03715 PF06971 Putative DNA-binding protein N-terminus KB228_RS03725 PF04143 Sulphur transport KB228_RS03730 PF01206 Sulfurtransferase TusA KB228_RS03735 PF00909 Ammonium Transporter Family KB228_RS03740 PF13407 Periplasmic binding protein domain KB228_RS03740 PF00356 Bacterial regulatory proteins, lacI family KB228_RS03745 PF08244 Glycosyl hydrolases family 32 C terminal KB228_RS03745 PF00251 Glycosyl hydrolases family 32 N-terminal domain KB228_RS03750 PF00294 pfkB family carbohydrate kinase KB228_RS03755 PF04397 LytTr DNA-binding domain KB228_RS03755 PF00072 Response regulator receiver domain KB228_RS03760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS03760 PF00989 PAS fold KB228_RS03760 PF17203 Single cache domain 3 KB228_RS03760 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KB228_RS03770 PF04647 Accessory gene regulator B KB228_RS03775 PF05372 Delta lysin family KB228_RS03780 PF00795 Carbon-nitrogen hydrolase KB228_RS03795 PF02517 CPBP intramembrane metalloprotease KB228_RS03800 PF00166 Chaperonin 10 Kd subunit KB228_RS03805 PF00118 TCP-1/cpn60 chaperonin family KB228_RS03830 PF00392 Bacterial regulatory proteins, gntR family KB228_RS03835 PF00005 ABC transporter KB228_RS03845 PF00005 ABC transporter KB228_RS03890 PF00589 Phage integrase family KB228_RS03890 PF02899 Phage integrase, N-terminal SAM-like domain KB228_RS03895 PF00589 Phage integrase family KB228_RS03895 PF02899 Phage integrase, N-terminal SAM-like domain KB228_RS03910 PF08863 YolD-like protein KB228_RS03915 PF08139 Prokaryotic membrane lipoprotein lipid attachment site KB228_RS03920 PF00905 Penicillin binding protein transpeptidase domain KB228_RS03920 PF05569 BlaR1 peptidase M56 KB228_RS03925 PF03965 Penicillinase repressor KB228_RS03935 PF10282 Lactonase, 7-bladed beta-propeller KB228_RS03940 PF00171 Aldehyde dehydrogenase family KB228_RS03945 PF02833 DHHA2 domain KB228_RS03945 PF01368 DHH family KB228_RS03950 PF00857 Isochorismatase family KB228_RS03960 PF00800 Prephenate dehydratase KB228_RS03960 PF01842 ACT domain KB228_RS03965 PF02898 Nitric oxide synthase, oxygenase domain KB228_RS03970 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KB228_RS03970 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KB228_RS03970 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KB228_RS03975 PF02540 NAD synthase KB228_RS03980 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KB228_RS03985 PF14044 NETI protein KB228_RS03990 PF00206 Lyase KB228_RS03990 PF10397 Adenylosuccinate lyase C-terminus KB228_RS03995 PF01371 Trp repressor protein KB228_RS04000 PF01884 PcrB family KB228_RS04005 PF13361 UvrD-like helicase C-terminal domain KB228_RS04005 PF00580 UvrD/REP helicase N-terminal domain KB228_RS04010 PF12826 Helix-hairpin-helix motif KB228_RS04010 PF01653 NAD-dependent DNA ligase adenylation domain KB228_RS04010 PF00533 BRCA1 C Terminus (BRCT) domain KB228_RS04010 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KB228_RS04010 PF03120 NAD-dependent DNA ligase OB-fold domain KB228_RS04015 PF07537 CamS sex pheromone cAM373 precursor KB228_RS04020 PF00474 Sodium:solute symporter family KB228_RS04025 PF02686 Glu-tRNAGln amidotransferase C subunit KB228_RS04030 PF01425 Amidase KB228_RS04035 PF02637 GatB domain KB228_RS04035 PF02934 GatB/GatE catalytic domain KB228_RS04040 PF00781 Diacylglycerol kinase catalytic domain KB228_RS04045 PF05958 tRNA (Uracil-5-)-methyltransferase KB228_RS04055 PF11799 impB/mucB/samB family C-terminal domain KB228_RS04055 PF00817 impB/mucB/samB family KB228_RS04065 PF00210 Ferritin-like domain KB228_RS04070 PF08245 Mur ligase middle domain KB228_RS04070 PF08353 Domain of unknown function (DUF1727) KB228_RS04075 PF07685 CobB/CobQ-like glutamine amidotransferase domain KB228_RS04085 PF06081 Aromatic acid exporter family member 1 KB228_RS04090 PF00557 Metallopeptidase family M24 KB228_RS04105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS04105 PF07730 Histidine kinase KB228_RS04110 PF00072 Response regulator receiver domain KB228_RS04110 PF00196 Bacterial regulatory proteins, luxR family KB228_RS04115 PF03631 Virulence factor BrkB KB228_RS04125 PF01451 Low molecular weight phosphotyrosine protein phosphatase KB228_RS04130 PF06569 Protein of unknown function (DUF1128) KB228_RS04135 PF02073 Thermophilic metalloprotease (M29) KB228_RS04140 PF03061 Thioesterase superfamily KB228_RS04145 PF08756 YfkB-like domain KB228_RS04145 PF04055 Radical SAM superfamily KB228_RS04155 PF01965 DJ-1/PfpI family KB228_RS04160 PF00912 Transglycosylase KB228_RS04165 PF02631 RecX family KB228_RS04175 PF00005 ABC transporter KB228_RS04175 PF01476 LysM domain KB228_RS04185 PF04307 LexA-binding, inner membrane-associated putative hydrolase KB228_RS04190 PF14815 NUDIX domain KB228_RS04190 PF00633 Helix-hairpin-helix motif KB228_RS04190 PF00730 HhH-GPD superfamily base excision DNA repair protein KB228_RS04195 PF04167 Protein of unknown function (DUF402) KB228_RS04200 PF00005 ABC transporter KB228_RS04200 PF00664 ABC transporter transmembrane region KB228_RS04205 PF06081 Aromatic acid exporter family member 1 KB228_RS04210 PF00202 Aminotransferase class-III KB228_RS04215 PF00578 AhpC/TSA family KB228_RS04220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KB228_RS04220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KB228_RS04225 PF01475 Ferric uptake regulator family KB228_RS04395 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS04400 PF00005 ABC transporter KB228_RS04410 PF08331 Domain of unknown function (DUF1730) KB228_RS04415 PF00588 SpoU rRNA Methylase family KB228_RS04435 PF10415 Fumarase C C-terminus KB228_RS04435 PF00206 Lyase KB228_RS04440 PF00849 RNA pseudouridylate synthase KB228_RS04440 PF01479 S4 domain KB228_RS04445 PF13185 GAF domain KB228_RS04445 PF07730 Histidine kinase KB228_RS04450 PF00072 Response regulator receiver domain KB228_RS04450 PF00196 Bacterial regulatory proteins, luxR family KB228_RS04460 PF04286 Protein of unknown function (DUF445) KB228_RS04465 PF06133 Control of competence regulator ComK, YlbF/YmcA KB228_RS04470 PF00149 Calcineurin-like phosphoesterase KB228_RS04480 PF01966 HD domain KB228_RS04490 PF00639 PPIC-type PPIASE domain KB228_RS04505 PF01230 HIT domain KB228_RS04510 PF00005 ABC transporter KB228_RS04515 PF05975 Bacterial ABC transporter protein EcsB KB228_RS04530 PF01208 Uroporphyrinogen decarboxylase (URO-D) KB228_RS04535 PF00762 Ferrochelatase KB228_RS04540 PF01593 Flavin containing amine oxidoreductase KB228_RS04615 PF13193 AMP-binding enzyme C-terminal domain KB228_RS04615 PF00501 AMP-binding enzyme KB228_RS04625 PF01809 Putative membrane protein insertion efficiency factor KB228_RS04630 PF00293 NUDIX domain KB228_RS04635 PF00326 Prolyl oligopeptidase family KB228_RS04640 PF01293 Phosphoenolpyruvate carboxykinase KB228_RS04645 PF02772 S-adenosylmethionine synthetase, central domain KB228_RS04645 PF02773 S-adenosylmethionine synthetase, C-terminal domain KB228_RS04645 PF00438 S-adenosylmethionine synthetase, N-terminal domain KB228_RS04655 PF00248 Aldo/keto reductase family KB228_RS04665 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KB228_RS04670 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KB228_RS04680 PF00923 Transaldolase/Fructose-6-phosphate aldolase KB228_RS04695 PF04542 Sigma-70 region 2 KB228_RS04695 PF00196 Bacterial regulatory proteins, luxR family KB228_RS04705 PF13457 GW (Gly-Tryp) dipeptide domain KB228_RS04705 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KB228_RS04715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KB228_RS04715 PF01872 RibD C-terminal domain KB228_RS04720 PF00677 Lumazine binding domain KB228_RS04725 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KB228_RS04725 PF00925 GTP cyclohydrolase II KB228_RS04730 PF00885 6,7-dimethyl-8-ribityllumazine synthase KB228_RS04740 PF01619 Proline dehydrogenase KB228_RS04745 PF12146 Serine aminopeptidase, S33 KB228_RS04750 PF01047 MarR family KB228_RS04760 PF06962 Putative rRNA methylase KB228_RS04765 PF16199 Radical_SAM C-terminal domain KB228_RS04765 PF04055 Radical SAM superfamily KB228_RS04770 PF07690 Major Facilitator Superfamily KB228_RS04775 PF08264 Anticodon-binding domain of tRNA KB228_RS04775 PF00133 tRNA synthetases class I (I, L, M and V) KB228_RS04775 PF13603 Leucyl-tRNA synthetase, Domain 2 KB228_RS04775 PF09334 tRNA synthetases class I (M) KB228_RS04785 PF04650 YSIRK type signal peptide KB228_RS04785 PF01468 GA module KB228_RS04785 PF07564 Domain of Unknown Function (DUF1542) KB228_RS04785 PF07564 Domain of Unknown Function (DUF1542) KB228_RS04785 PF04650 YSIRK type signal peptide KB228_RS04785 PF01468 GA module KB228_RS04795 PF01943 Polysaccharide biosynthesis protein KB228_RS04795 PF14667 Polysaccharide biosynthesis C-terminal domain KB228_RS04800 PF00849 RNA pseudouridylate synthase KB228_RS04800 PF01479 S4 domain KB228_RS04810 PF01546 Peptidase family M20/M25/M40 KB228_RS04815 PF01063 Amino-transferase class IV KB228_RS04820 PF01636 Phosphotransferase enzyme family KB228_RS04825 PF02390 Putative methyltransferase KB228_RS04835 PF05343 M42 glutamyl aminopeptidase KB228_RS04840 PF00085 Thioredoxin KB228_RS04845 PF07285 Protein of unknown function (DUF1444) KB228_RS04850 PF01588 Putative tRNA binding domain KB228_RS04850 PF14794 Domain of unknown function (DUF4479) KB228_RS04855 PF01580 FtsK/SpoIIIE family KB228_RS04855 PF09397 Ftsk gamma domain KB228_RS04855 PF17854 FtsK alpha domain KB228_RS04860 PF02875 Mur ligase family, glutamate ligase domain KB228_RS04860 PF01225 Mur ligase family, catalytic domain KB228_RS04860 PF08245 Mur ligase middle domain KB228_RS04865 PF06103 Bacterial protein of unknown function (DUF948) KB228_RS04875 PF00793 DAHP synthetase I family KB228_RS04875 PF01817 Chorismate mutase type II KB228_RS04880 PF00356 Bacterial regulatory proteins, lacI family KB228_RS04885 PF01268 Formate--tetrahydrofolate ligase KB228_RS04890 PF00905 Penicillin binding protein transpeptidase domain KB228_RS04890 PF00912 Transglycosylase KB228_RS04895 PF00579 tRNA synthetases class I (W and Y) KB228_RS04895 PF01479 S4 domain KB228_RS04900 PF13180 PDZ domain KB228_RS04905 PF01553 Acyltransferase KB228_RS04910 PF02378 Phosphotransferase system, EIIC KB228_RS04910 PF00367 phosphotransferase system, EIIB KB228_RS04920 PF01842 ACT domain KB228_RS04920 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KB228_RS04920 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KB228_RS04925 PF00266 Aminotransferase class-V KB228_RS04930 PF02566 OsmC-like protein KB228_RS04935 PF03009 Glycerophosphoryl diester phosphodiesterase family KB228_RS04940 PF01479 S4 domain KB228_RS04940 PF00163 Ribosomal protein S4/S9 N-terminal domain KB228_RS04945 PF13185 GAF domain KB228_RS04950 PF06160 Septation ring formation regulator, EzrA KB228_RS04955 PF00266 Aminotransferase class-V KB228_RS04960 PF02926 THUMP domain KB228_RS04960 PF02568 Thiamine biosynthesis protein (ThiI) KB228_RS04965 PF01925 Sulfite exporter TauE/SafE KB228_RS04970 PF08534 Redoxin KB228_RS04975 PF02384 N-6 DNA Methylase KB228_RS04980 PF00871 Acetokinase family KB228_RS04990 PF00582 Universal stress protein family KB228_RS04995 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KB228_RS04995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KB228_RS05000 PF01321 Creatinase/Prolidase N-terminal domain KB228_RS05000 PF00557 Metallopeptidase family M24 KB228_RS05015 PF03061 Thioesterase superfamily KB228_RS05015 PF00571 CBS domain KB228_RS05015 PF07085 DRTGG domain KB228_RS05015 PF00392 Bacterial regulatory proteins, gntR family KB228_RS05020 PF01368 DHH family KB228_RS05020 PF02272 DHHA1 domain KB228_RS05025 PF07733 Bacterial DNA polymerase III alpha NTPase domain KB228_RS05025 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KB228_RS05025 PF14579 Helix-hairpin-helix motif KB228_RS05025 PF02811 PHP domain KB228_RS05025 PF01336 OB-fold nucleic acid binding domain KB228_RS05030 PF00390 Malic enzyme, N-terminal domain KB228_RS05030 PF03949 Malic enzyme, NAD binding domain KB228_RS05035 PF01039 Carboxyl transferase domain KB228_RS05035 PF17848 Acetyl-coA carboxylase zinc finger domain KB228_RS05040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit KB228_RS05045 PF00365 Phosphofructokinase KB228_RS05050 PF00391 PEP-utilising enzyme, mobile domain KB228_RS05050 PF00224 Pyruvate kinase, barrel domain KB228_RS05050 PF02887 Pyruvate kinase, alpha/beta domain KB228_RS05055 PF00324 Amino acid permease KB228_RS05060 PF00285 Citrate synthase, C-terminal domain KB228_RS05065 PF00180 Isocitrate/isopropylmalate dehydrogenase KB228_RS05070 PF00072 Response regulator receiver domain KB228_RS05070 PF00486 Transcriptional regulatory protein, C terminal KB228_RS05075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS05075 PF00512 His Kinase A (phospho-acceptor) domain KB228_RS05075 PF00989 PAS fold KB228_RS05075 PF16736 Single Cache-like KB228_RS05080 PF01367 5'-3' exonuclease, C-terminal SAM fold KB228_RS05080 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KB228_RS05080 PF00476 DNA polymerase family A KB228_RS05085 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KB228_RS05085 PF06827 Zinc finger found in FPG and IleRS KB228_RS05085 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KB228_RS05090 PF01121 Dephospho-CoA kinase KB228_RS05100 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KB228_RS05100 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KB228_RS05105 PF03477 ATP cone domain KB228_RS05110 PF07261 Replication initiation and membrane attachment KB228_RS05115 PF07319 Primosomal protein DnaI N-terminus KB228_RS05115 PF01695 IstB-like ATP binding protein KB228_RS05120 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KB228_RS05120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KB228_RS05120 PF02824 TGS domain KB228_RS05120 PF03129 Anticodon binding domain KB228_RS05125 PF00324 Amino acid permease KB228_RS05130 PF00707 Translation initiation factor IF-3, C-terminal domain KB228_RS05130 PF05198 Translation initiation factor IF-3, N-terminal domain KB228_RS05135 PF01632 Ribosomal protein L35 KB228_RS05140 PF00453 Ribosomal protein L20 KB228_RS05155 PF05697 Bacterial trigger factor protein (TF) KB228_RS05155 PF05698 Bacterial trigger factor protein (TF) C-terminus KB228_RS05155 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KB228_RS05160 PF06689 ClpX C4-type zinc finger KB228_RS05160 PF07724 AAA domain (Cdc48 subfamily) KB228_RS05160 PF10431 C-terminal, D2-small domain, of ClpB protein KB228_RS05165 PF01926 50S ribosome-binding GTPase KB228_RS05170 PF01488 Shikimate / quinate 5-dehydrogenase KB228_RS05170 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KB228_RS05170 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KB228_RS05180 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KB228_RS05180 PF03900 Porphobilinogen deaminase, C-terminal domain KB228_RS05185 PF02602 Uroporphyrinogen-III synthase HemD KB228_RS05185 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KB228_RS05190 PF00490 Delta-aminolevulinic acid dehydratase KB228_RS05195 PF00202 Aminotransferase class-III KB228_RS05205 PF03352 Methyladenine glycosylase KB228_RS05210 PF00133 tRNA synthetases class I (I, L, M and V) KB228_RS05210 PF10458 Valyl tRNA synthetase tRNA binding arm KB228_RS05210 PF08264 Anticodon-binding domain of tRNA KB228_RS05215 PF02875 Mur ligase family, glutamate ligase domain KB228_RS05215 PF08245 Mur ligase middle domain KB228_RS05225 PF04002 RadC-like JAB domain KB228_RS05245 PF04085 rod shape-determining protein MreC KB228_RS05255 PF00829 Ribosomal prokaryotic L21 protein KB228_RS05260 PF04327 Cysteine protease Prp KB228_RS05265 PF01016 Ribosomal L27 protein KB228_RS05270 PF01018 GTP1/OBG KB228_RS05270 PF01926 50S ribosome-binding GTPase KB228_RS05270 PF09269 Domain of unknown function (DUF1967) KB228_RS05280 PF07499 RuvA, C-terminal domain KB228_RS05280 PF01330 RuvA N terminal domain KB228_RS05285 PF17864 RuvB AAA lid domain KB228_RS05285 PF05496 Holliday junction DNA helicase RuvB P-loop domain KB228_RS05285 PF05491 RuvB C-terminal winged helix domain KB228_RS05290 PF02547 Queuosine biosynthesis protein KB228_RS05295 PF01702 Queuine tRNA-ribosyltransferase KB228_RS05300 PF02699 Preprotein translocase subunit KB228_RS05305 PF02355 Protein export membrane protein KB228_RS05305 PF07549 SecD/SecF GG Motif KB228_RS05310 PF01368 DHH family KB228_RS05310 PF10141 Single-strand DNA-specific exonuclease, C terminal domain KB228_RS05310 PF17768 RecJ OB domain KB228_RS05310 PF02272 DHHA1 domain KB228_RS05315 PF00156 Phosphoribosyl transferase domain KB228_RS05320 PF02824 TGS domain KB228_RS05320 PF04607 Region found in RelA / SpoT proteins KB228_RS05320 PF13291 ACT domain KB228_RS05325 PF02580 D-Tyr-tRNA(Tyr) deacylase KB228_RS05330 PF08239 Bacterial SH3 domain KB228_RS05330 PF01520 N-acetylmuramoyl-L-alanine amidase KB228_RS05335 PF13393 Histidyl-tRNA synthetase KB228_RS05335 PF03129 Anticodon binding domain KB228_RS05340 PF01336 OB-fold nucleic acid binding domain KB228_RS05340 PF00152 tRNA synthetases class II (D, K and N) KB228_RS05340 PF02938 GAD domain KB228_RS05350 PF00899 ThiF family KB228_RS05355 PF05496 Holliday junction DNA helicase RuvB P-loop domain KB228_RS05355 PF12002 MgsA AAA+ ATPase C terminal KB228_RS05355 PF16193 AAA C-terminal domain KB228_RS05360 PF02082 Transcriptional regulator KB228_RS05370 PF00296 Luciferase-like monooxygenase KB228_RS05375 PF00266 Aminotransferase class-V KB228_RS05390 PF14490 Helix-hairpin-helix containing domain KB228_RS05390 PF13538 UvrD-like helicase C-terminal domain KB228_RS05390 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KB228_RS05395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KB228_RS05395 PF01411 tRNA synthetases class II (A) KB228_RS05395 PF02272 DHHA1 domain KB228_RS05400 PF06135 IreB regulatory phosphoprotein KB228_RS05405 PF03652 Holliday junction resolvase KB228_RS05410 PF06949 Protein of unknown function (DUF1292) KB228_RS05420 PF01136 Peptidase family U32 KB228_RS05425 PF16325 Peptidase family U32 C-terminal domain KB228_RS05425 PF01136 Peptidase family U32 KB228_RS05430 PF00485 Phosphoribulokinase / Uridine kinase family KB228_RS05435 PF01272 Transcription elongation factor, GreA/GreB, C-term KB228_RS05435 PF03449 Transcription elongation factor, N-terminal KB228_RS05440 PF01797 Transposase IS200 like KB228_RS05445 PF02682 Carboxyltransferase domain, subdomain C and D KB228_RS05450 PF02626 Carboxyltransferase domain, subdomain A and B KB228_RS05455 PF00364 Biotin-requiring enzyme KB228_RS05460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KB228_RS05460 PF02785 Biotin carboxylase C-terminal domain KB228_RS05460 PF00289 Biotin carboxylase, N-terminal domain KB228_RS05465 PF03746 LamB/YcsF family KB228_RS05470 PF01566 Natural resistance-associated macrophage protein KB228_RS05475 PF01048 Phosphorylase superfamily KB228_RS05485 PF01926 50S ribosome-binding GTPase KB228_RS05490 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KB228_RS05490 PF01488 Shikimate / quinate 5-dehydrogenase KB228_RS05490 PF08501 Shikimate dehydrogenase substrate binding domain KB228_RS05495 PF01985 CRS1 / YhbY (CRM) domain KB228_RS05500 PF01467 Cytidylyltransferase-like KB228_RS05505 PF01966 HD domain KB228_RS05515 PF13649 Methyltransferase domain KB228_RS05525 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KB228_RS05530 PF03772 Competence protein KB228_RS05530 PF00753 Metallo-beta-lactamase superfamily KB228_RS05530 PF13567 Domain of unknown function (DUF4131) KB228_RS05535 PF06144 DNA polymerase III, delta subunit KB228_RS05540 PF01649 Ribosomal protein S20 KB228_RS05545 PF03144 Elongation factor Tu domain 2 KB228_RS05545 PF14492 Elongation Factor G, domain II KB228_RS05545 PF06421 GTP-binding protein LepA C-terminus KB228_RS05545 PF00009 Elongation factor Tu GTP binding domain KB228_RS05545 PF00679 Elongation factor G C-terminus KB228_RS05550 PF04055 Radical SAM superfamily KB228_RS05550 PF06969 HemN C-terminal domain KB228_RS05555 PF01628 HrcA protein C terminal domain KB228_RS05560 PF01025 GrpE KB228_RS05565 PF00012 Hsp70 protein KB228_RS05570 PF01556 DnaJ C terminal domain KB228_RS05570 PF00226 DnaJ domain KB228_RS05570 PF00684 DnaJ central domain KB228_RS05580 PF04452 RNA methyltransferase KB228_RS05585 PF01938 TRAM domain KB228_RS05585 PF04055 Radical SAM superfamily KB228_RS05585 PF00919 Uncharacterized protein family UPF0004 KB228_RS05590 PF01165 Ribosomal protein S21 KB228_RS05595 PF01957 NfeD-like C-terminal, partner-binding KB228_RS05595 PF01972 Serine dehydrogenase proteinase KB228_RS05600 PF12127 SigmaW regulon antibacterial KB228_RS05610 PF02562 PhoH-like protein KB228_RS05615 PF02130 Uncharacterized protein family UPF0054 KB228_RS05620 PF01219 Prokaryotic diacylglycerol kinase KB228_RS05625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KB228_RS05630 PF01926 50S ribosome-binding GTPase KB228_RS05630 PF07650 KH domain KB228_RS05635 PF11967 Recombination protein O N terminal KB228_RS05635 PF02565 Recombination protein O C terminal KB228_RS05640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KB228_RS05640 PF03129 Anticodon binding domain KB228_RS05645 PF08279 HTH domain KB228_RS05645 PF00571 CBS domain KB228_RS05650 PF03618 Kinase/pyrophosphorylase KB228_RS05655 PF01807 CHC2 zinc finger KB228_RS05655 PF08275 DNA primase catalytic core, N-terminal domain KB228_RS05655 PF00772 DnaB-like helicase N terminal domain KB228_RS05655 PF13662 Toprim domain KB228_RS05660 PF03979 Sigma-70 factor, region 1.1 KB228_RS05660 PF04542 Sigma-70 region 2 KB228_RS05660 PF04545 Sigma-70, region 4 KB228_RS05660 PF00140 Sigma-70 factor, region 1.2 KB228_RS05660 PF04539 Sigma-70 region 3 KB228_RS05665 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KB228_RS05670 PF01784 NIF3 (NGG1p interacting factor 3) KB228_RS05675 PF00270 DEAD/DEAH box helicase KB228_RS05675 PF00271 Helicase conserved C-terminal domain KB228_RS05680 PF01261 Xylose isomerase-like TIM barrel KB228_RS05685 PF00005 ABC transporter KB228_RS05690 PF00950 ABC 3 transport family KB228_RS05695 PF01475 Ferric uptake regulator family KB228_RS05700 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KB228_RS05700 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KB228_RS05705 PF00905 Penicillin binding protein transpeptidase domain KB228_RS05705 PF03717 Penicillin-binding Protein dimerisation domain KB228_RS05710 PF00471 Ribosomal protein L33 KB228_RS05715 PF01812 5-formyltetrahydrofolate cyclo-ligase family KB228_RS05720 PF01694 Rhomboid family KB228_RS05725 PF06014 Bacterial protein of unknown function (DUF910) KB228_RS05730 PF00480 ROK family KB228_RS05735 PF01910 Thiamine-binding protein KB228_RS05740 PF00753 Metallo-beta-lactamase superfamily KB228_RS05745 PF00437 Type II/IV secretion system protein KB228_RS05750 PF00482 Type II secretion system (T2SS), protein F KB228_RS05755 PF07963 Prokaryotic N-terminal methylation motif KB228_RS05775 PF01202 Shikimate kinase KB228_RS05780 PF01571 Aminomethyltransferase folate-binding domain KB228_RS05780 PF08669 Glycine cleavage T-protein C-terminal barrel domain KB228_RS05785 PF02347 Glycine cleavage system P-protein KB228_RS05790 PF02347 Glycine cleavage system P-protein KB228_RS05800 PF00581 Rhodanese-like domain KB228_RS05805 PF03099 Biotin/lipoate A/B protein ligase family KB228_RS05820 PF01321 Creatinase/Prolidase N-terminal domain KB228_RS05820 PF00557 Metallopeptidase family M24 KB228_RS05825 PF01132 Elongation factor P (EF-P) OB domain KB228_RS05825 PF08207 Elongation factor P (EF-P) KOW-like domain KB228_RS05825 PF09285 Elongation factor P, C-terminal KB228_RS05830 PF01118 Semialdehyde dehydrogenase, NAD binding domain KB228_RS05830 PF02774 Semialdehyde dehydrogenase, dimerisation domain KB228_RS05835 PF01960 ArgJ family KB228_RS05840 PF00696 Amino acid kinase family KB228_RS05845 PF00202 Aminotransferase class-III KB228_RS05850 PF00364 Biotin-requiring enzyme KB228_RS05855 PF00289 Biotin carboxylase, N-terminal domain KB228_RS05855 PF02785 Biotin carboxylase C-terminal domain KB228_RS05855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KB228_RS05860 PF03780 Asp23 family, cell envelope-related function KB228_RS05865 PF01029 NusB family KB228_RS05870 PF02601 Exonuclease VII, large subunit KB228_RS05870 PF13742 OB-fold nucleic acid binding domain KB228_RS05875 PF02609 Exonuclease VII small subunit KB228_RS05880 PF00348 Polyprenyl synthetase KB228_RS05885 PF01316 Arginine repressor, DNA binding domain KB228_RS05885 PF02863 Arginine repressor, C-terminal domain KB228_RS05890 PF13476 AAA domain KB228_RS05895 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KB228_RS05895 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS05900 PF00676 Dehydrogenase E1 component KB228_RS05905 PF02779 Transketolase, pyrimidine binding domain KB228_RS05905 PF02780 Transketolase, C-terminal domain KB228_RS05910 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KB228_RS05910 PF00364 Biotin-requiring enzyme KB228_RS05910 PF02817 e3 binding domain KB228_RS05915 PF06491 Disulphide isomerase KB228_RS05920 PF11728 Putative aromatic acid exporter C-terminal domain KB228_RS05920 PF06081 Aromatic acid exporter family member 1 KB228_RS05930 PF07687 Peptidase dimerisation domain KB228_RS05930 PF01546 Peptidase family M20/M25/M40 KB228_RS05935 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KB228_RS05935 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KB228_RS05940 PF00128 Alpha amylase, catalytic domain KB228_RS05940 PF16657 Maltogenic Amylase, C-terminal domain KB228_RS05950 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain KB228_RS05950 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain KB228_RS05955 PF12706 Beta-lactamase superfamily domain KB228_RS05960 PF03807 NADP oxidoreductase coenzyme F420-dependent KB228_RS05960 PF14748 Pyrroline-5-carboxylate reductase dimerisation KB228_RS05965 PF00106 short chain dehydrogenase KB228_RS05970 PF00248 Aldo/keto reductase family KB228_RS05975 PF00293 NUDIX domain KB228_RS05980 PF01475 Ferric uptake regulator family KB228_RS05985 PF02899 Phage integrase, N-terminal SAM-like domain KB228_RS05985 PF00589 Phage integrase family KB228_RS05990 PF03745 Domain of unknown function (DUF309) KB228_RS05995 PF02616 Segregation and condensation protein ScpA KB228_RS06000 PF04079 Segregation and condensation complex subunit ScpB KB228_RS06005 PF01479 S4 domain KB228_RS06005 PF00849 RNA pseudouridylate synthase KB228_RS06010 PF00486 Transcriptional regulatory protein, C terminal KB228_RS06010 PF00072 Response regulator receiver domain KB228_RS06015 PF00512 His Kinase A (phospho-acceptor) domain KB228_RS06015 PF18698 Histidine kinase sensor domain KB228_RS06015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS06015 PF00672 HAMP domain KB228_RS06020 PF12822 ECF transporter, substrate-specific component KB228_RS06035 PF00271 Helicase conserved C-terminal domain KB228_RS06035 PF00270 DEAD/DEAH box helicase KB228_RS06040 PF01476 LysM domain KB228_RS06050 PF00710 Asparaginase, N-terminal KB228_RS06050 PF17763 Glutaminase/Asparaginase C-terminal domain KB228_RS06055 PF02224 Cytidylate kinase KB228_RS06060 PF00575 S1 RNA binding domain KB228_RS06065 PF01926 50S ribosome-binding GTPase KB228_RS06065 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KB228_RS06070 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KB228_RS06070 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KB228_RS06075 PF00216 Bacterial DNA-binding protein KB228_RS06085 PF01209 ubiE/COQ5 methyltransferase family KB228_RS06090 PF00348 Polyprenyl synthetase KB228_RS06095 PF00334 Nucleoside diphosphate kinase KB228_RS06100 PF01264 Chorismate synthase KB228_RS06105 PF01761 3-dehydroquinate synthase KB228_RS06110 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KB228_RS06120 PF08864 UPF0302 domain KB228_RS06120 PF08858 IDEAL domain KB228_RS06125 PF07187 Protein of unknown function (DUF1405) KB228_RS06130 PF04298 Putative neutral zinc metallopeptidase KB228_RS06135 PF03819 MazG nucleotide pyrophosphohydrolase domain KB228_RS06140 PF13439 Glycosyltransferase Family 4 KB228_RS06140 PF00534 Glycosyl transferases group 1 KB228_RS06145 PF13735 tRNA nucleotidyltransferase domain 2 putative KB228_RS06145 PF12627 Probable RNA and SrmB- binding site of polymerase A KB228_RS06145 PF01743 Poly A polymerase head domain KB228_RS06150 PF08279 HTH domain KB228_RS06150 PF03099 Biotin/lipoate A/B protein ligase family KB228_RS06150 PF02237 Biotin protein ligase C terminal domain KB228_RS06155 PF00929 Exonuclease KB228_RS06155 PF04851 Type III restriction enzyme, res subunit KB228_RS06155 PF13307 Helicase C-terminal domain KB228_RS06160 PF01336 OB-fold nucleic acid binding domain KB228_RS06160 PF00152 tRNA synthetases class II (D, K and N) KB228_RS06165 PF07261 Replication initiation and membrane attachment KB228_RS06170 PF00730 HhH-GPD superfamily base excision DNA repair protein KB228_RS06170 PF00633 Helix-hairpin-helix motif KB228_RS06170 PF10576 Iron-sulfur binding domain of endonuclease III KB228_RS06180 PF00912 Transglycosylase KB228_RS06180 PF00905 Penicillin binding protein transpeptidase domain KB228_RS06185 PF03838 Recombination protein U KB228_RS06195 PF06908 YspA SLOG family KB228_RS06200 PF05103 DivIVA protein KB228_RS06210 PF01170 Putative RNA methylase family UPF0020 KB228_RS06210 PF02926 THUMP domain KB228_RS06220 PF00350 Dynamin family KB228_RS06225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KB228_RS06225 PF01367 5'-3' exonuclease, C-terminal SAM fold KB228_RS06230 PF01468 GA module KB228_RS06230 PF07564 Domain of Unknown Function (DUF1542) KB228_RS06240 PF02592 Putative vitamin uptake transporter KB228_RS06245 PF10782 Zinc-finger KB228_RS06250 PF13769 Virulence factor KB228_RS06250 PF08712 Scaffold protein Nfu/NifU N terminal KB228_RS06255 PF06491 Disulphide isomerase KB228_RS06265 PF00005 ABC transporter KB228_RS06270 PF00303 Thymidylate synthase KB228_RS06275 PF00186 Dihydrofolate reductase KB228_RS06280 PF02645 Uncharacterised protein, DegV family COG1307 KB228_RS06285 PF01625 Peptide methionine sulfoxide reductase KB228_RS06290 PF01641 SelR domain KB228_RS06295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KB228_RS06300 PF06855 YozE SAM-like fold KB228_RS06305 PF01471 Putative peptidoglycan binding domain KB228_RS06305 PF03572 Peptidase family S41 KB228_RS06305 PF17820 PDZ domain KB228_RS06315 PF04101 Glycosyltransferase family 28 C-terminal domain KB228_RS06315 PF03033 Glycosyltransferase family 28 N-terminal domain KB228_RS06320 PF01569 PAP2 superfamily KB228_RS06325 PF03459 TOBE domain KB228_RS06325 PF17912 MalK OB fold domain KB228_RS06325 PF00005 ABC transporter KB228_RS06330 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS06340 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS06350 PF01554 MatE KB228_RS06355 PF08220 DeoR-like helix-turn-helix domain KB228_RS06355 PF00455 DeoR C terminal sensor domain KB228_RS06360 PF00486 Transcriptional regulatory protein, C terminal KB228_RS06360 PF00072 Response regulator receiver domain KB228_RS06365 PF18719 ArlS sensor domain KB228_RS06365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS06365 PF00512 His Kinase A (phospho-acceptor) domain KB228_RS06370 PF00676 Dehydrogenase E1 component KB228_RS06370 PF16870 2-oxoglutarate dehydrogenase C-terminal KB228_RS06370 PF02779 Transketolase, pyrimidine binding domain KB228_RS06375 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KB228_RS06375 PF00364 Biotin-requiring enzyme KB228_RS06375 PF02817 e3 binding domain KB228_RS06395 PF08406 CbbQ/NirQ/NorQ C-terminal KB228_RS06395 PF07728 AAA domain (dynein-related subfamily) KB228_RS06400 PF00092 von Willebrand factor type A domain KB228_RS06405 PF05525 Branched-chain amino acid transport protein KB228_RS06410 PF05816 Toxic anion resistance protein (TelA) KB228_RS06420 PF00708 Acylphosphatase KB228_RS06430 PF00313 'Cold-shock' DNA-binding domain KB228_RS06445 PF00005 ABC transporter KB228_RS06455 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KB228_RS06455 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KB228_RS06460 PF00842 Alanine racemase, C-terminal domain KB228_RS06460 PF01168 Alanine racemase, N-terminal domain KB228_RS06465 PF07687 Peptidase dimerisation domain KB228_RS06465 PF01546 Peptidase family M20/M25/M40 KB228_RS06470 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KB228_RS06470 PF00132 Bacterial transferase hexapeptide (six repeats) KB228_RS06470 PF14602 Hexapeptide repeat of succinyl-transferase KB228_RS06475 PF05173 Dihydrodipicolinate reductase, C-terminus KB228_RS06475 PF01113 Dihydrodipicolinate reductase, N-terminus KB228_RS06480 PF00701 Dihydrodipicolinate synthetase family KB228_RS06485 PF02774 Semialdehyde dehydrogenase, dimerisation domain KB228_RS06485 PF01118 Semialdehyde dehydrogenase, NAD binding domain KB228_RS06490 PF00696 Amino acid kinase family KB228_RS06490 PF01842 ACT domain KB228_RS06490 PF13840 ACT domain KB228_RS06500 PF00005 ABC transporter KB228_RS06500 PF12848 ABC transporter KB228_RS06505 PF17783 CvfB-like winged helix domain KB228_RS06505 PF13509 S1 domain KB228_RS06510 PF12849 PBP superfamily domain KB228_RS06515 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS06520 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS06525 PF00005 ABC transporter KB228_RS06530 PF01895 PhoU domain KB228_RS06545 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS06550 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS06555 PF00005 ABC transporter KB228_RS06560 PF00005 ABC transporter KB228_RS06565 PF01497 Periplasmic binding protein KB228_RS06575 PF02388 FemAB family KB228_RS06580 PF02388 FemAB family KB228_RS06590 PF00290 Tryptophan synthase alpha chain KB228_RS06595 PF00291 Pyridoxal-phosphate dependent enzyme KB228_RS06600 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KB228_RS06605 PF00218 Indole-3-glycerol phosphate synthase KB228_RS06610 PF00591 Glycosyl transferase family, a/b domain KB228_RS06615 PF02885 Glycosyl transferase family, helical bundle domain KB228_RS06615 PF00117 Glutamine amidotransferase class-I KB228_RS06615 PF00591 Glycosyl transferase family, a/b domain KB228_RS06625 PF01842 ACT domain KB228_RS06625 PF02153 Prephenate dehydrogenase KB228_RS06630 PF11798 IMS family HHH motif KB228_RS06630 PF11799 impB/mucB/samB family C-terminal domain KB228_RS06630 PF00817 impB/mucB/samB family KB228_RS06635 PF01361 Tautomerase enzyme KB228_RS06640 PF03816 Cell envelope-related transcriptional attenuator domain KB228_RS06645 PF01625 Peptide methionine sulfoxide reductase KB228_RS06650 PF03706 Lysylphosphatidylglycerol synthase TM region KB228_RS06650 PF09924 Uncharacterised conserved protein (DUF2156) KB228_RS06655 PF01594 AI-2E family transporter KB228_RS06660 PF00874 PRD domain KB228_RS06660 PF03123 CAT RNA binding domain KB228_RS06665 PF01235 Sodium:alanine symporter family KB228_RS06670 PF00521 DNA gyrase/topoisomerase IV, subunit A KB228_RS06670 PF03989 DNA gyrase C-terminal domain, beta-propeller KB228_RS06675 PF00204 DNA gyrase B KB228_RS06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS06675 PF01751 Toprim domain KB228_RS06675 PF00986 DNA gyrase B subunit, carboxyl terminus KB228_RS06680 PF02660 Glycerol-3-phosphate acyltransferase KB228_RS06690 PF03061 Thioesterase superfamily KB228_RS06695 PF00694 Aconitase C-terminal domain KB228_RS06695 PF00330 Aconitase family (aconitate hydratase) KB228_RS06700 PF02028 BCCT, betaine/carnitine/choline family transporter KB228_RS06705 PF01741 Large-conductance mechanosensitive channel, MscL KB228_RS06710 PF13476 AAA domain KB228_RS06715 PF12320 Type 5 capsule protein repressor C-terminal domain KB228_RS06715 PF00149 Calcineurin-like phosphoesterase KB228_RS06720 PF07301 Protein of unknown function (DUF1453) KB228_RS06730 PF00456 Transketolase, thiamine diphosphate binding domain KB228_RS06730 PF02780 Transketolase, C-terminal domain KB228_RS06730 PF02779 Transketolase, pyrimidine binding domain KB228_RS06735 PF05979 Bacterial protein of unknown function (DUF896) KB228_RS06745 PF00717 Peptidase S24-like KB228_RS06745 PF01726 LexA DNA binding domain KB228_RS06750 PF00188 Cysteine-rich secretory protein family KB228_RS06750 PF14504 CAP-associated N-terminal KB228_RS06755 PF00478 IMP dehydrogenase / GMP reductase domain KB228_RS06760 PF00253 Ribosomal protein S14p/S29e KB228_RS06765 PF00471 Ribosomal protein L33 KB228_RS06770 PF00199 Catalase KB228_RS06770 PF06628 Catalase-related immune-responsive KB228_RS06775 PF00324 Amino acid permease KB228_RS06790 PF08544 GHMP kinases C terminal KB228_RS06790 PF00288 GHMP kinases N terminal domain KB228_RS06795 PF00291 Pyridoxal-phosphate dependent enzyme KB228_RS06800 PF00742 Homoserine dehydrogenase KB228_RS06800 PF03447 Homoserine dehydrogenase, NAD binding domain KB228_RS06800 PF01842 ACT domain KB228_RS06805 PF00696 Amino acid kinase family KB228_RS06805 PF13840 ACT domain KB228_RS06820 PF00565 Staphylococcal nuclease homologue KB228_RS06830 PF00196 Bacterial regulatory proteins, luxR family KB228_RS06830 PF00072 Response regulator receiver domain KB228_RS06835 PF07730 Histidine kinase KB228_RS06845 PF00005 ABC transporter KB228_RS06850 PF13396 Phospholipase_D-nuclease N-terminal KB228_RS06850 PF13091 PLD-like domain KB228_RS06910 PF05105 Bacteriophage holin family KB228_RS07005 PF04466 Phage terminase large subunit KB228_RS07005 PF17288 Terminase RNAseH like domain KB228_RS07030 PF00692 dUTPase KB228_RS07110 PF00120 Glutamine synthetase, catalytic domain KB228_RS07110 PF03951 Glutamine synthetase, beta-Grasp domain KB228_RS07115 PF13411 MerR HTH family regulatory protein KB228_RS07120 PF06838 Methionine gamma-lyase KB228_RS07125 PF16360 GTP-binding GTPase Middle Region KB228_RS07125 PF01926 50S ribosome-binding GTPase KB228_RS07125 PF13167 GTP-binding GTPase N-terminal KB228_RS07130 PF00255 Glutathione peroxidase KB228_RS07135 PF17209 Hfq protein KB228_RS07145 PF00561 alpha/beta hydrolase fold KB228_RS07150 PF01266 FAD dependent oxidoreductase KB228_RS07150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KB228_RS07155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KB228_RS07155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KB228_RS07160 PF00230 Major intrinsic protein KB228_RS07165 PF04309 Glycerol-3-phosphate responsive antiterminator KB228_RS07170 PF01119 DNA mismatch repair protein, C-terminal domain KB228_RS07170 PF08676 MutL C terminal dimerisation domain KB228_RS07175 PF05188 MutS domain II KB228_RS07175 PF05192 MutS domain III KB228_RS07175 PF05190 MutS family domain IV KB228_RS07175 PF00488 MutS domain V KB228_RS07175 PF01624 MutS domain I KB228_RS07185 PF06133 Control of competence regulator ComK, YlbF/YmcA KB228_RS07190 PF04055 Radical SAM superfamily KB228_RS07190 PF01938 TRAM domain KB228_RS07190 PF00919 Uncharacterized protein family UPF0004 KB228_RS07200 PF05908 Poly-gamma-glutamate hydrolase KB228_RS07205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KB228_RS07210 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II KB228_RS07210 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg KB228_RS07210 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase KB228_RS07215 PF13277 YmdB-like protein KB228_RS07225 PF01966 HD domain KB228_RS07225 PF00013 KH domain KB228_RS07225 PF12072 Domain of unknown function (DUF3552) KB228_RS07230 PF00154 recA bacterial DNA recombination protein KB228_RS07235 PF02464 Competence-damaged protein KB228_RS07235 PF00994 Probable molybdopterin binding domain KB228_RS07235 PF18146 Damage-inducible protein CinA KH domain KB228_RS07240 PF01066 CDP-alcohol phosphatidyltransferase KB228_RS07250 PF11868 Protein of unknown function (DUF3388) KB228_RS07260 PF00675 Insulinase (Peptidase family M16) KB228_RS07260 PF05193 Peptidase M16 inactive domain KB228_RS07265 PF05193 Peptidase M16 inactive domain KB228_RS07270 PF00392 Bacterial regulatory proteins, gntR family KB228_RS07270 PF07702 UTRA domain KB228_RS07275 PF17854 FtsK alpha domain KB228_RS07275 PF09397 Ftsk gamma domain KB228_RS07275 PF01580 FtsK/SpoIIIE family KB228_RS07280 PF00753 Metallo-beta-lactamase superfamily KB228_RS07280 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KB228_RS07280 PF17770 Ribonuclease J C-terminal domain KB228_RS07285 PF00575 S1 RNA binding domain KB228_RS07285 PF01138 3' exoribonuclease family, domain 1 KB228_RS07285 PF03725 3' exoribonuclease family, domain 2 KB228_RS07285 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain KB228_RS07285 PF00013 KH domain KB228_RS07290 PF00312 Ribosomal protein S15 KB228_RS07295 PF01687 Riboflavin kinase KB228_RS07295 PF06574 FAD synthetase KB228_RS07300 PF16198 tRNA pseudouridylate synthase B C-terminal domain KB228_RS07300 PF01509 TruB family pseudouridylate synthase (N terminal domain) KB228_RS07305 PF02033 Ribosome-binding factor A KB228_RS07310 PF00009 Elongation factor Tu GTP binding domain KB228_RS07310 PF11987 Translation-initiation factor 2 KB228_RS07310 PF04760 Translation initiation factor IF-2, N-terminal region KB228_RS07315 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KB228_RS07320 PF04296 Protein of unknown function (DUF448) KB228_RS07325 PF13184 NusA-like KH domain KB228_RS07325 PF08529 NusA N-terminal domain KB228_RS07325 PF00575 S1 RNA binding domain KB228_RS07330 PF17384 RimP C-terminal SH3 domain KB228_RS07330 PF02576 RimP N-terminal domain KB228_RS07335 PF14579 Helix-hairpin-helix motif KB228_RS07335 PF14480 DNA polymerase III polC-type N-terminus I KB228_RS07335 PF11490 DNA polymerase III polC-type N-terminus II KB228_RS07335 PF02811 PHP domain KB228_RS07335 PF00929 Exonuclease KB228_RS07335 PF07733 Bacterial DNA polymerase III alpha NTPase domain KB228_RS07335 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KB228_RS07340 PF03129 Anticodon binding domain KB228_RS07340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KB228_RS07340 PF04073 Aminoacyl-tRNA editing domain KB228_RS07345 PF13180 PDZ domain KB228_RS07345 PF02163 Peptidase family M50 KB228_RS07355 PF01255 Putative undecaprenyl diphosphate synthase KB228_RS07360 PF01765 Ribosome recycling factor KB228_RS07365 PF00696 Amino acid kinase family KB228_RS07370 PF00889 Elongation factor TS KB228_RS07375 PF00318 Ribosomal protein S2 KB228_RS07380 PF06018 CodY GAF-like domain KB228_RS07380 PF08222 CodY helix-turn-helix domain KB228_RS07385 PF00004 ATPase family associated with various cellular activities (AAA) KB228_RS07385 PF07724 AAA domain (Cdc48 subfamily) KB228_RS07385 PF10431 C-terminal, D2-small domain, of ClpB protein KB228_RS07390 PF00227 Proteasome subunit KB228_RS07395 PF00589 Phage integrase family KB228_RS07395 PF02899 Phage integrase, N-terminal SAM-like domain KB228_RS07400 PF01134 Glucose inhibited division protein A KB228_RS07405 PF01396 Topoisomerase DNA binding C4 zinc finger KB228_RS07405 PF01751 Toprim domain KB228_RS07405 PF01131 DNA topoisomerase KB228_RS07410 PF02481 DNA recombination-mediator protein A KB228_RS07420 PF02629 CoA binding domain KB228_RS07420 PF00549 CoA-ligase KB228_RS07425 PF08442 ATP-grasp domain KB228_RS07425 PF00549 CoA-ligase KB228_RS07430 PF01351 Ribonuclease HII KB228_RS07435 PF01926 50S ribosome-binding GTPase KB228_RS07445 PF09586 Bacterial membrane protein YfhO KB228_RS07455 PF01245 Ribosomal protein L19 KB228_RS07460 PF01746 tRNA (Guanine-1)-methyltransferase KB228_RS07465 PF01782 RimM N-terminal domain KB228_RS07465 PF05239 PRC-barrel domain KB228_RS07470 PF00886 Ribosomal protein S16 KB228_RS07475 PF02881 SRP54-type protein, helical bundle domain KB228_RS07475 PF02978 Signal peptide binding domain KB228_RS07475 PF00448 SRP54-type protein, GTPase domain KB228_RS07480 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KB228_RS07485 PF02881 SRP54-type protein, helical bundle domain KB228_RS07485 PF00448 SRP54-type protein, GTPase domain KB228_RS07490 PF02463 RecF/RecN/SMC N terminal domain KB228_RS07490 PF06470 SMC proteins Flexible Hinge Domain KB228_RS07495 PF14622 Ribonuclease-III-like KB228_RS07495 PF00035 Double-stranded RNA binding motif KB228_RS07500 PF00550 Phosphopantetheine attachment site KB228_RS07510 PF00698 Acyl transferase domain KB228_RS07515 PF02504 Fatty acid synthesis protein KB228_RS07525 PF17191 RecG wedge domain KB228_RS07525 PF00271 Helicase conserved C-terminal domain KB228_RS07525 PF00270 DEAD/DEAH box helicase KB228_RS07530 PF02734 DAK2 domain KB228_RS07530 PF13684 Dihydroxyacetone kinase family KB228_RS07535 PF03780 Asp23 family, cell envelope-related function KB228_RS07540 PF00830 Ribosomal L28 family KB228_RS07550 PF00834 Ribulose-phosphate 3 epimerase family KB228_RS07555 PF16745 RsgA N-terminal domain KB228_RS07555 PF03193 RsgA GTPase KB228_RS07560 PF00069 Protein kinase domain KB228_RS07560 PF03793 PASTA domain KB228_RS07570 PF04055 Radical SAM superfamily KB228_RS07575 PF01029 NusB family KB228_RS07575 PF01189 16S rRNA methyltransferase RsmB/F KB228_RS07580 PF02911 Formyl transferase, C-terminal domain KB228_RS07580 PF00551 Formyl transferase KB228_RS07585 PF01327 Polypeptide deformylase KB228_RS07595 PF04851 Type III restriction enzyme, res subunit KB228_RS07595 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KB228_RS07595 PF17764 3′ DNA-binding domain (3′BD) KB228_RS07595 PF00271 Helicase conserved C-terminal domain KB228_RS07595 PF18074 Primosomal protein N C-terminal domain KB228_RS07600 PF04127 DNA / pantothenate metabolism flavoprotein KB228_RS07600 PF02441 Flavoprotein KB228_RS07605 PF01192 RNA polymerase Rpb6 KB228_RS07610 PF00625 Guanylate kinase KB228_RS07615 PF05670 NFACT protein RNA binding domain KB228_RS07630 PF00156 Phosphoribosyl transferase domain KB228_RS07635 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KB228_RS07640 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KB228_RS07640 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KB228_RS07640 PF02142 MGS-like domain KB228_RS07645 PF00117 Glutamine amidotransferase class-I KB228_RS07645 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KB228_RS07650 PF01979 Amidohydrolase family KB228_RS07655 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KB228_RS07655 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KB228_RS07660 PF00860 Permease family KB228_RS07665 PF00156 Phosphoribosyl transferase domain KB228_RS07670 PF00849 RNA pseudouridylate synthase KB228_RS07670 PF01479 S4 domain KB228_RS07675 PF01252 Signal peptidase (SPase) II KB228_RS07680 PF05257 CHAP domain KB228_RS07680 PF01476 LysM domain KB228_RS07690 PF00133 tRNA synthetases class I (I, L, M and V) KB228_RS07690 PF08264 Anticodon-binding domain of tRNA KB228_RS07690 PF06827 Zinc finger found in FPG and IleRS KB228_RS07695 PF05103 DivIVA protein KB228_RS07705 PF02325 YGGT family KB228_RS07710 PF04472 Cell division protein SepF KB228_RS07715 PF01168 Alanine racemase, N-terminal domain KB228_RS07720 PF02578 Multi-copper polyphenol oxidoreductase laccase KB228_RS07725 PF12327 FtsZ family, C-terminal domain KB228_RS07725 PF00091 Tubulin/FtsZ family, GTPase domain KB228_RS07730 PF02491 SHS2 domain inserted in FTSA KB228_RS07735 PF03799 Cell division protein FtsQ KB228_RS07735 PF08478 POTRA domain, FtsQ-type KB228_RS07740 PF02875 Mur ligase family, glutamate ligase domain KB228_RS07740 PF08245 Mur ligase middle domain KB228_RS07745 PF00953 Glycosyl transferase family 4 KB228_RS07750 PF03793 PASTA domain KB228_RS07750 PF00905 Penicillin binding protein transpeptidase domain KB228_RS07750 PF03717 Penicillin-binding Protein dimerisation domain KB228_RS07755 PF04977 Septum formation initiator KB228_RS07760 PF01795 MraW methylase family KB228_RS07765 PF02381 MraZ protein, putative antitoxin-like KB228_RS07770 PF10079 Bacillithiol biosynthesis BshC KB228_RS07775 PF13673 Acetyltransferase (GNAT) domain KB228_RS07780 PF13419 Haloacid dehalogenase-like hydrolase KB228_RS07785 PF05480 Staphylococcus haemolytic protein KB228_RS07790 PF05480 Staphylococcus haemolytic protein KB228_RS07815 PF01725 Ham1 family KB228_RS07820 PF01177 Asp/Glu/Hydantoin racemase KB228_RS07825 PF13085 2Fe-2S iron-sulfur cluster binding domain KB228_RS07825 PF13183 4Fe-4S dicluster domain KB228_RS07830 PF02910 Fumarate reductase flavoprotein C-term KB228_RS07830 PF00890 FAD binding domain KB228_RS07835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KB228_RS07845 PF01541 GIY-YIG catalytic domain KB228_RS07845 PF02151 UvrB/uvrC motif KB228_RS07845 PF08459 UvrC Helix-hairpin-helix N-terminal KB228_RS07850 PF00085 Thioredoxin KB228_RS07855 PF00488 MutS domain V KB228_RS07855 PF01713 Smr domain KB228_RS07860 PF14791 DNA polymerase beta thumb KB228_RS07860 PF02811 PHP domain KB228_RS07860 PF14716 Helix-hairpin-helix domain KB228_RS07870 PF05164 Cell division protein ZapA KB228_RS07875 PF11858 Domain of unknown function (DUF3378) KB228_RS07875 PF01351 Ribonuclease HII KB228_RS07880 PF03484 tRNA synthetase B5 domain KB228_RS07880 PF03147 Ferredoxin-fold anticodon binding domain KB228_RS07880 PF01588 Putative tRNA binding domain KB228_RS07880 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KB228_RS07880 PF03483 B3/4 domain KB228_RS07885 PF01409 tRNA synthetases class II core domain (F) KB228_RS07885 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KB228_RS07890 PF08032 RNA 2'-O ribose methyltransferase substrate binding KB228_RS07890 PF00588 SpoU rRNA Methylase family KB228_RS07895 PF04650 YSIRK type signal peptide KB228_RS07895 PF17041 E domain KB228_RS07895 PF07501 G5 domain KB228_RS07895 PF00746 LPXTG cell wall anchor motif KB228_RS07900 PF01783 Ribosomal L32p protein family KB228_RS07910 PF05636 HIGH Nucleotidyl Transferase KB228_RS07915 PF01467 Cytidylyltransferase-like KB228_RS07930 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KB228_RS07935 PF03009 Glycerophosphoryl diester phosphodiesterase family KB228_RS07940 PF06133 Control of competence regulator ComK, YlbF/YmcA KB228_RS07945 PF00188 Cysteine-rich secretory protein family KB228_RS07945 PF14504 CAP-associated N-terminal KB228_RS07955 PF01040 UbiA prenyltransferase family KB228_RS07960 PF02628 Cytochrome oxidase assembly protein KB228_RS07965 PF00682 HMGL-like KB228_RS07965 PF02436 Conserved carboxylase domain KB228_RS07965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KB228_RS07965 PF00364 Biotin-requiring enzyme KB228_RS07965 PF00289 Biotin carboxylase, N-terminal domain KB228_RS07965 PF02785 Biotin carboxylase C-terminal domain KB228_RS07970 PF01098 Cell cycle protein KB228_RS07975 PF07408 Protein of unknown function (DUF1507) KB228_RS07985 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KB228_RS08000 PF14492 Elongation Factor G, domain II KB228_RS08000 PF00009 Elongation factor Tu GTP binding domain KB228_RS08000 PF03144 Elongation factor Tu domain 2 KB228_RS08000 PF00679 Elongation factor G C-terminus KB228_RS08010 PF00459 Inositol monophosphatase family KB228_RS08015 PF06335 Protein of unknown function (DUF1054) KB228_RS08020 PF01566 Natural resistance-associated macrophage protein KB228_RS08035 PF13416 Bacterial extracellular solute-binding protein KB228_RS08045 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS08050 PF00005 ABC transporter KB228_RS08050 PF08402 TOBE domain KB228_RS08060 PF05256 Uncharacterised protein family (UPF0223) KB228_RS08065 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS08065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KB228_RS08070 PF00364 Biotin-requiring enzyme KB228_RS08070 PF02817 e3 binding domain KB228_RS08070 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KB228_RS08075 PF02779 Transketolase, pyrimidine binding domain KB228_RS08075 PF02780 Transketolase, C-terminal domain KB228_RS08080 PF00676 Dehydrogenase E1 component KB228_RS08090 PF01327 Polypeptide deformylase KB228_RS08095 PF07288 Protein of unknown function (DUF1447) KB228_RS08100 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KB228_RS08100 PF17770 Ribonuclease J C-terminal domain KB228_RS08100 PF00753 Metallo-beta-lactamase superfamily KB228_RS08105 PF02080 TrkA-C domain KB228_RS08105 PF02254 TrkA-N domain KB228_RS08110 PF02322 Cytochrome bd terminal oxidase subunit II KB228_RS08115 PF01654 Cytochrome bd terminal oxidase subunit I KB228_RS08125 PF00391 PEP-utilising enzyme, mobile domain KB228_RS08125 PF02896 PEP-utilising enzyme, TIM barrel domain KB228_RS08125 PF05524 PEP-utilising enzyme, N-terminal KB228_RS08130 PF00381 PTS HPr component phosphorylation site KB228_RS08140 PF10672 S-adenosylmethionine-dependent methyltransferase KB228_RS08140 PF17785 PUA-like domain KB228_RS08155 PF06100 MCRA family KB228_RS08165 PF00005 ABC transporter KB228_RS08170 PF02361 Cobalt transport protein KB228_RS08175 PF02844 Phosphoribosylglycinamide synthetase, N domain KB228_RS08175 PF02843 Phosphoribosylglycinamide synthetase, C domain KB228_RS08175 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KB228_RS08180 PF02142 MGS-like domain KB228_RS08180 PF01808 AICARFT/IMPCHase bienzyme KB228_RS08185 PF00551 Formyl transferase KB228_RS08190 PF02769 AIR synthase related protein, C-terminal domain KB228_RS08190 PF00586 AIR synthase related protein, N-terminal domain KB228_RS08195 PF00156 Phosphoribosyl transferase domain KB228_RS08195 PF13537 Glutamine amidotransferase domain KB228_RS08200 PF00586 AIR synthase related protein, N-terminal domain KB228_RS08200 PF02769 AIR synthase related protein, C-terminal domain KB228_RS08200 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KB228_RS08210 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KB228_RS08215 PF01259 SAICAR synthetase KB228_RS08220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KB228_RS08220 PF02222 ATP-grasp domain KB228_RS08220 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KB228_RS08225 PF00731 AIR carboxylase KB228_RS08230 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KB228_RS08230 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KB228_RS08240 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KB228_RS08245 PF00115 Cytochrome C and Quinol oxidase polypeptide I KB228_RS08250 PF00510 Cytochrome c oxidase subunit III KB228_RS08255 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KB228_RS08260 PF01156 Inosine-uridine preferring nucleoside hydrolase KB228_RS08265 PF00144 Beta-lactamase KB228_RS08270 PF03816 Cell envelope-related transcriptional attenuator domain KB228_RS08275 PF10804 Protein of unknown function (DUF2538) KB228_RS08280 PF13673 Acetyltransferase (GNAT) domain KB228_RS08285 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KB228_RS08285 PF13457 GW (Gly-Tryp) dipeptide domain KB228_RS08290 PF01047 MarR family KB228_RS08295 PF01757 Acyltransferase family KB228_RS08300 PF00155 Aminotransferase class I and II KB228_RS08305 PF00378 Enoyl-CoA hydratase/isomerase KB228_RS08310 PF12697 Alpha/beta hydrolase family KB228_RS08315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KB228_RS08315 PF16582 Middle domain of thiamine pyrophosphate KB228_RS08315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KB228_RS08320 PF00425 chorismate binding enzyme KB228_RS08325 PF01040 UbiA prenyltransferase family KB228_RS08330 PF13302 Acetyltransferase (GNAT) domain KB228_RS08335 PF05154 TM2 domain KB228_RS08345 PF01810 LysE type translocator KB228_RS08385 PF03099 Biotin/lipoate A/B protein ligase family KB228_RS08385 PF10437 Bacterial lipoate protein ligase C-terminus KB228_RS08390 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KB228_RS08400 PF02872 5'-nucleotidase, C-terminal domain KB228_RS08400 PF00149 Calcineurin-like phosphoesterase KB228_RS08405 PF02386 Cation transport protein KB228_RS08410 PF13180 PDZ domain KB228_RS08415 PF03741 Integral membrane protein TerC family KB228_RS08420 PF00009 Elongation factor Tu GTP binding domain KB228_RS08420 PF03144 Elongation factor Tu domain 2 KB228_RS08420 PF16658 Class II release factor RF3, C-terminal domain KB228_RS08430 PF01225 Mur ligase family, catalytic domain KB228_RS08430 PF08245 Mur ligase middle domain KB228_RS08430 PF02875 Mur ligase family, glutamate ligase domain KB228_RS08435 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KB228_RS08435 PF04101 Glycosyltransferase family 28 C-terminal domain KB228_RS08440 PF07690 Major Facilitator Superfamily KB228_RS08450 PF00756 Putative esterase KB228_RS08455 PF01594 AI-2E family transporter KB228_RS08485 PF17760 UvrA interaction domain KB228_RS08485 PF17755 UvrA DNA-binding domain KB228_RS08505 PF02254 TrkA-N domain KB228_RS08505 PF02080 TrkA-C domain KB228_RS08505 PF00999 Sodium/hydrogen exchanger family KB228_RS08510 PF03448 MgtE intracellular N domain KB228_RS08510 PF01769 Divalent cation transporter KB228_RS08510 PF00571 CBS domain KB228_RS08515 PF00849 RNA pseudouridylate synthase KB228_RS08520 PF01513 ATP-NAD kinase KB228_RS08525 PF04607 Region found in RelA / SpoT proteins KB228_RS08540 PF01152 Bacterial-like globin KB228_RS08550 PF08439 Oligopeptidase F KB228_RS08550 PF01432 Peptidase family M3 KB228_RS08560 PF05389 Negative regulator of genetic competence (MecA) KB228_RS08570 PF03960 ArsC family KB228_RS08575 PF00579 tRNA synthetases class I (W and Y) KB228_RS08580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KB228_RS08585 PF00005 ABC transporter KB228_RS08585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KB228_RS08590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KB228_RS08590 PF00005 ABC transporter KB228_RS08595 PF12911 N-terminal TM domain of oligopeptide transport permease C KB228_RS08595 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS08600 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS08610 PF02801 Beta-ketoacyl synthase, C-terminal domain KB228_RS08610 PF00109 Beta-ketoacyl synthase, N-terminal domain KB228_RS08615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KB228_RS08615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KB228_RS08625 PF00004 ATPase family associated with various cellular activities (AAA) KB228_RS08625 PF07724 AAA domain (Cdc48 subfamily) KB228_RS08625 PF02861 Clp amino terminal domain, pathogenicity island component KB228_RS08625 PF10431 C-terminal, D2-small domain, of ClpB protein KB228_RS08625 PF17871 AAA lid domain KB228_RS08630 PF01757 Acyltransferase family KB228_RS08635 PF01883 Iron-sulfur cluster assembly protein KB228_RS08645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KB228_RS08645 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS08660 PF07457 Protein of unknown function (DUF1516) KB228_RS08665 PF01557 Fumarylacetoacetate (FAA) hydrolase family KB228_RS08670 PF13361 UvrD-like helicase C-terminal domain KB228_RS08670 PF00580 UvrD/REP helicase N-terminal domain KB228_RS08670 PF12705 PD-(D/E)XK nuclease superfamily KB228_RS08675 PF13361 UvrD-like helicase C-terminal domain KB228_RS08675 PF12705 PD-(D/E)XK nuclease superfamily KB228_RS08680 PF10502 Signal peptidase, peptidase S26 KB228_RS08685 PF10502 Signal peptidase, peptidase S26 KB228_RS08690 PF09335 SNARE associated Golgi protein KB228_RS08695 PF00342 Phosphoglucose isomerase KB228_RS08700 PF00764 Arginosuccinate synthase KB228_RS08705 PF14698 Argininosuccinate lyase C-terminal KB228_RS08705 PF00206 Lyase KB228_RS08710 PF03009 Glycerophosphoryl diester phosphodiesterase family KB228_RS08715 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KB228_RS08715 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KB228_RS08720 PF00202 Aminotransferase class-III KB228_RS08730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KB228_RS08735 PF00575 S1 RNA binding domain KB228_RS08740 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KB228_RS08750 PF13244 Domain of unknown function (DUF4040) KB228_RS08750 PF00361 Proton-conducting membrane transporter KB228_RS08750 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KB228_RS08755 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KB228_RS08760 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KB228_RS08765 PF00361 Proton-conducting membrane transporter KB228_RS08770 PF01899 Na+/H+ ion antiporter subunit KB228_RS08775 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KB228_RS08780 PF03334 Na+/H+ antiporter subunit KB228_RS08790 PF03061 Thioesterase superfamily KB228_RS08795 PF03553 Na+/H+ antiporter family KB228_RS08795 PF13726 Na+-H+ antiporter family KB228_RS08800 PF02789 Cytosol aminopeptidase family, N-terminal domain KB228_RS08800 PF00883 Cytosol aminopeptidase family, catalytic domain KB228_RS08805 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS08810 PF01521 Iron-sulphur cluster biosynthesis KB228_RS08815 PF07293 Protein of unknown function (DUF1450) KB228_RS08820 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS08825 PF07315 Protein of unknown function (DUF1462) KB228_RS08830 PF01106 NifU-like domain KB228_RS08835 PF04914 DltD protein KB228_RS08840 PF00550 Phosphopantetheine attachment site KB228_RS08845 PF03062 MBOAT, membrane-bound O-acyltransferase family KB228_RS08850 PF13193 AMP-binding enzyme C-terminal domain KB228_RS08850 PF00501 AMP-binding enzyme KB228_RS08860 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KB228_RS08860 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KB228_RS08865 PF13344 Haloacid dehalogenase-like hydrolase KB228_RS08870 PF01934 Protein of unknown function DUF86 KB228_RS08880 PF06265 Protein of unknown function (DUF1027) KB228_RS08885 PF04055 Radical SAM superfamily KB228_RS08885 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KB228_RS08890 PF02872 5'-nucleotidase, C-terminal domain KB228_RS08895 PF01925 Sulfite exporter TauE/SafE KB228_RS08900 PF01904 Protein of unknown function DUF72 KB228_RS08905 PF03471 Transporter associated domain KB228_RS08905 PF01595 Cyclin M transmembrane N-terminal domain KB228_RS08905 PF00571 CBS domain KB228_RS08935 PF01458 Uncharacterized protein family (UPF0051) KB228_RS08940 PF01592 NifU-like N terminal domain KB228_RS08945 PF00266 Aminotransferase class-V KB228_RS08950 PF01458 Uncharacterized protein family (UPF0051) KB228_RS08955 PF00005 ABC transporter KB228_RS08965 PF05532 CsbD-like KB228_RS08975 PF03180 NLPA lipoprotein KB228_RS08980 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS08985 PF00005 ABC transporter KB228_RS08985 PF09383 NIL domain KB228_RS08995 PF01751 Toprim domain KB228_RS09000 PF01597 Glycine cleavage H-protein KB228_RS09005 PF03960 ArsC family KB228_RS09010 PF00085 Thioredoxin KB228_RS09020 PF01487 Type I 3-dehydroquinase KB228_RS09025 PF02566 OsmC-like protein KB228_RS09045 PF00300 Histidine phosphatase superfamily (branch 1) KB228_RS09080 PF05908 Poly-gamma-glutamate hydrolase KB228_RS09095 PF00313 'Cold-shock' DNA-binding domain KB228_RS09100 PF16916 Dimerisation domain of Zinc Transporter KB228_RS09100 PF01545 Cation efflux family KB228_RS09120 PF02386 Cation transport protein KB228_RS09150 PF01668 SmpB protein KB228_RS09155 PF00575 S1 RNA binding domain KB228_RS09155 PF00773 RNB domain KB228_RS09155 PF08206 Ribonuclease B OB domain KB228_RS09155 PF17876 Cold shock domain KB228_RS09160 PF12146 Serine aminopeptidase, S33 KB228_RS09165 PF03840 Preprotein translocase SecG subunit KB228_RS09175 PF00113 Enolase, C-terminal TIM barrel domain KB228_RS09175 PF03952 Enolase, N-terminal domain KB228_RS09180 PF01676 Metalloenzyme superfamily KB228_RS09180 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KB228_RS09185 PF00121 Triosephosphate isomerase KB228_RS09190 PF00162 Phosphoglycerate kinase KB228_RS09195 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KB228_RS09195 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KB228_RS09200 PF04198 Putative sugar-binding domain KB228_RS09215 PF08338 Domain of unknown function (DUF1731) KB228_RS09215 PF01370 NAD dependent epimerase/dehydratase family KB228_RS09225 PF00574 Clp protease KB228_RS09235 PF02650 WhiA C-terminal HTH domain KB228_RS09235 PF14527 WhiA LAGLIDADG-like domain KB228_RS09235 PF10298 WhiA N-terminal LAGLIDADG-like domain KB228_RS09240 PF01933 Uncharacterised protein family UPF0052 KB228_RS09245 PF03668 P-loop ATPase protein family KB228_RS09250 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS09260 PF14602 Hexapeptide repeat of succinyl-transferase KB228_RS09265 PF01790 Prolipoprotein diacylglyceryl transferase KB228_RS09270 PF02603 HPr Serine kinase N terminus KB228_RS09270 PF07475 HPr Serine kinase C-terminal domain KB228_RS09275 PF17760 UvrA interaction domain KB228_RS09275 PF17755 UvrA DNA-binding domain KB228_RS09275 PF00005 ABC transporter KB228_RS09280 PF02151 UvrB/uvrC motif KB228_RS09280 PF00271 Helicase conserved C-terminal domain KB228_RS09280 PF12344 Ultra-violet resistance protein B KB228_RS09280 PF17757 UvrB interaction domain KB228_RS09280 PF04851 Type III restriction enzyme, res subunit KB228_RS09305 PF02810 SEC-C motif KB228_RS09305 PF07517 SecA DEAD-like domain KB228_RS09305 PF01043 SecA preprotein cross-linking domain KB228_RS09305 PF07516 SecA Wing and Scaffold domain KB228_RS09310 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KB228_RS09310 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KB228_RS09320 PF00271 Helicase conserved C-terminal domain KB228_RS09320 PF04851 Type III restriction enzyme, res subunit KB228_RS09325 PF02645 Uncharacterised protein, DegV family COG1307 KB228_RS09330 PF09186 Domain of unknown function (DUF1949) KB228_RS09330 PF01205 Uncharacterized protein family UPF0029 KB228_RS09335 PF00953 Glycosyl transferase family 4 KB228_RS09340 PF07694 5TMR of 5TMR-LYT KB228_RS09340 PF00990 Diguanylate cyclase, GGDEF domain KB228_RS09355 PF07687 Peptidase dimerisation domain KB228_RS09355 PF01546 Peptidase family M20/M25/M40 KB228_RS09360 PF02595 Glycerate kinase family KB228_RS09380 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KB228_RS09380 PF01565 FAD binding domain KB228_RS09395 PF00005 ABC transporter KB228_RS09400 PF01032 FecCD transport family KB228_RS09405 PF01032 FecCD transport family KB228_RS09415 PF00268 Ribonucleotide reductase, small chain KB228_RS09420 PF02867 Ribonucleotide reductase, barrel domain KB228_RS09420 PF00317 Ribonucleotide reductase, all-alpha domain KB228_RS09420 PF08343 Ribonucleotide reductase N-terminal KB228_RS09425 PF07972 NrdI Flavodoxin like KB228_RS09435 PF14489 QueF-like protein KB228_RS09440 PF00854 POT family KB228_RS09450 PF00781 Diacylglycerol kinase catalytic domain KB228_RS09455 PF00465 Iron-containing alcohol dehydrogenase KB228_RS09455 PF00171 Aldehyde dehydrogenase family KB228_RS09460 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) KB228_RS09465 PF00155 Aminotransferase class I and II KB228_RS09470 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS09475 PF00571 CBS domain KB228_RS09475 PF00005 ABC transporter KB228_RS09480 PF00270 DEAD/DEAH box helicase KB228_RS09480 PF00271 Helicase conserved C-terminal domain KB228_RS09480 PF00570 HRDC domain KB228_RS09480 PF09382 RQC domain KB228_RS09480 PF16124 RecQ zinc-binding KB228_RS09485 PF12848 ABC transporter KB228_RS09485 PF00005 ABC transporter KB228_RS09485 PF16326 ABC transporter C-terminal domain KB228_RS09500 PF00884 Sulfatase KB228_RS09510 PF02682 Carboxyltransferase domain, subdomain C and D KB228_RS09525 PF00425 chorismate binding enzyme KB228_RS09525 PF04715 Anthranilate synthase component I, N terminal region KB228_RS09530 PF00117 Glutamine amidotransferase class-I KB228_RS09535 PF06508 Queuosine biosynthesis protein QueC KB228_RS09540 PF01242 6-pyruvoyl tetrahydropterin synthase KB228_RS09545 PF04055 Radical SAM superfamily KB228_RS09570 PF00486 Transcriptional regulatory protein, C terminal KB228_RS09570 PF00072 Response regulator receiver domain KB228_RS09575 PF00512 His Kinase A (phospho-acceptor) domain KB228_RS09575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS09580 PF00535 Glycosyl transferase family 2 KB228_RS09585 PF00248 Aldo/keto reductase family KB228_RS09590 PF00571 CBS domain KB228_RS09590 PF01595 Cyclin M transmembrane N-terminal domain KB228_RS09590 PF03471 Transporter associated domain KB228_RS09595 PF01979 Amidohydrolase family KB228_RS09600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KB228_RS09600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KB228_RS09605 PF00294 pfkB family carbohydrate kinase KB228_RS09610 PF08220 DeoR-like helix-turn-helix domain KB228_RS09610 PF00455 DeoR C terminal sensor domain KB228_RS09615 PF04073 Aminoacyl-tRNA editing domain KB228_RS09625 PF07690 Major Facilitator Superfamily KB228_RS09640 PF03441 FAD binding domain of DNA photolyase KB228_RS09640 PF00875 DNA photolyase KB228_RS09645 PF00939 Sodium:sulfate symporter transmembrane region KB228_RS09650 PF00056 lactate/malate dehydrogenase, NAD binding domain KB228_RS09650 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KB228_RS09660 PF02492 CobW/HypB/UreG, nucleotide-binding domain KB228_RS09660 PF07683 Cobalamin synthesis protein cobW C-terminal domain KB228_RS09665 PF01047 MarR family KB228_RS09670 PF00664 ABC transporter transmembrane region KB228_RS09670 PF00005 ABC transporter KB228_RS09675 PF00664 ABC transporter transmembrane region KB228_RS09675 PF00005 ABC transporter KB228_RS09680 PF02673 Bacitracin resistance protein BacA KB228_RS09695 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KB228_RS09700 PF03641 Possible lysine decarboxylase KB228_RS09725 PF04306 Protein of unknown function (DUF456) KB228_RS09730 PF07690 Major Facilitator Superfamily KB228_RS09735 PF03466 LysR substrate binding domain KB228_RS09735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KB228_RS09750 PF00175 Oxidoreductase NAD-binding domain KB228_RS09750 PF00042 Globin KB228_RS09750 PF00970 Oxidoreductase FAD-binding domain KB228_RS09755 PF04405 Domain of Unknown function (DUF542) KB228_RS09755 PF01814 Hemerythrin HHE cation binding domain KB228_RS09765 PF01709 Transcriptional regulator KB228_RS09785 PF01476 LysM domain KB228_RS09785 PF05257 CHAP domain KB228_RS09790 PF01384 Phosphate transporter family KB228_RS09795 PF01865 Protein of unknown function DUF47 KB228_RS09800 PF02687 FtsX-like permease family KB228_RS09805 PF00005 ABC transporter KB228_RS09810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KB228_RS09815 PF00072 Response regulator receiver domain KB228_RS09815 PF00486 Transcriptional regulatory protein, C terminal KB228_RS09820 PF01370 NAD dependent epimerase/dehydratase family KB228_RS09845 PF00005 ABC transporter KB228_RS09850 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KB228_RS09850 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KB228_RS09855 PF01773 Na+ dependent nucleoside transporter N-terminus KB228_RS09855 PF07662 Na+ dependent nucleoside transporter C-terminus KB228_RS09860 PF00664 ABC transporter transmembrane region KB228_RS09860 PF00005 ABC transporter KB228_RS09865 PF01467 Cytidylyltransferase-like KB228_RS09870 PF00535 Glycosyl transferase family 2 KB228_RS09875 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KB228_RS09880 PF01061 ABC-2 type transporter KB228_RS09885 PF00005 ABC transporter KB228_RS09890 PF03808 Glycosyl transferase WecB/TagA/CpsF family KB228_RS09900 PF18357 Diphteria toxin repressor SH3 domain KB228_RS09900 PF01325 Iron dependent repressor, N-terminal DNA binding domain KB228_RS09900 PF02742 Iron dependent repressor, metal binding and dimerisation domain KB228_RS09905 PF00005 ABC transporter KB228_RS09910 PF00950 ABC 3 transport family KB228_RS09915 PF01297 Zinc-uptake complex component A periplasmic KB228_RS09920 PF00999 Sodium/hydrogen exchanger family KB228_RS09925 PF03334 Na+/H+ antiporter subunit KB228_RS09930 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KB228_RS09935 PF01899 Na+/H+ ion antiporter subunit KB228_RS09940 PF00361 Proton-conducting membrane transporter KB228_RS09945 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KB228_RS09950 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KB228_RS09955 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KB228_RS09955 PF00361 Proton-conducting membrane transporter KB228_RS09955 PF13244 Domain of unknown function (DUF4040) KB228_RS09985 PF00561 alpha/beta hydrolase fold KB228_RS10005 PF13419 Haloacid dehalogenase-like hydrolase KB228_RS10010 PF01032 FecCD transport family KB228_RS10015 PF01497 Periplasmic binding protein KB228_RS10020 PF13411 MerR HTH family regulatory protein KB228_RS10020 PF07739 TipAS antibiotic-recognition domain KB228_RS10025 PF00730 HhH-GPD superfamily base excision DNA repair protein KB228_RS10025 PF10576 Iron-sulfur binding domain of endonuclease III KB228_RS10025 PF00633 Helix-hairpin-helix motif KB228_RS10030 PF05746 DALR anticodon binding domain KB228_RS10030 PF03485 Arginyl tRNA synthetase N terminal domain KB228_RS10030 PF00750 tRNA synthetases class I (R) KB228_RS10045 PF00107 Zinc-binding dehydrogenase KB228_RS10045 PF08240 Alcohol dehydrogenase GroES-like domain KB228_RS10050 PF09861 Lactate racemase N-terminal domain KB228_RS10055 PF02540 NAD synthase KB228_RS10060 PF00731 AIR carboxylase KB228_RS10065 PF01969 Protein of unknown function DUF111 KB228_RS10070 PF08741 YwhD family KB228_RS10075 PF01966 HD domain KB228_RS10085 PF00248 Aldo/keto reductase family KB228_RS10095 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KB228_RS10095 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS10100 PF07293 Protein of unknown function (DUF1450) KB228_RS10105 PF00288 GHMP kinases N terminal domain KB228_RS10105 PF08544 GHMP kinases C terminal KB228_RS10115 PF00288 GHMP kinases N terminal domain KB228_RS10120 PF03099 Biotin/lipoate A/B protein ligase family KB228_RS10125 PF01515 Phosphate acetyl/butaryl transferase KB228_RS10130 PF06778 Chlorite dismutase KB228_RS10150 PF13520 Amino acid permease KB228_RS10155 PF04241 Protein of unknown function (DUF423) KB228_RS10165 PF03167 Uracil DNA glycosylase superfamily KB228_RS10175 PF08543 Phosphomethylpyrimidine kinase KB228_RS10180 PF17412 Family of unknown function KB228_RS10195 PF02803 Thiolase, C-terminal domain KB228_RS10195 PF00108 Thiolase, N-terminal domain KB228_RS10200 PF00501 AMP-binding enzyme KB228_RS10210 PF01380 SIS domain KB228_RS10215 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KB228_RS10220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KB228_RS10230 PF02585 GlcNAc-PI de-N-acetylase KB228_RS10235 PF02649 Type I GTP cyclohydrolase folE2 KB228_RS10255 PF04650 YSIRK type signal peptide KB228_RS10255 PF10425 C-terminus of bacterial fibrinogen-binding adhesin KB228_RS10255 PF17210 SdrD B-like domain KB228_RS10255 PF00746 LPXTG cell wall anchor motif KB228_RS10255 PF17961 Bacterial Ig domain KB228_RS10260 PF03358 NADPH-dependent FMN reductase KB228_RS10270 PF14437 MafB19-like deaminase KB228_RS10275 PF01712 Deoxynucleoside kinase KB228_RS10280 PF01712 Deoxynucleoside kinase KB228_RS10290 PF00296 Luciferase-like monooxygenase KB228_RS10295 PF13419 Haloacid dehalogenase-like hydrolase KB228_RS10300 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KB228_RS10305 PF00107 Zinc-binding dehydrogenase KB228_RS10305 PF08240 Alcohol dehydrogenase GroES-like domain KB228_RS10310 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KB228_RS10315 PF01063 Amino-transferase class IV KB228_RS10320 PF01370 NAD dependent epimerase/dehydratase family KB228_RS10330 PF02423 Ornithine cyclodeaminase/mu-crystallin family KB228_RS10340 PF01546 Peptidase family M20/M25/M40 KB228_RS10340 PF07687 Peptidase dimerisation domain KB228_RS10345 PF00009 Elongation factor Tu GTP binding domain KB228_RS10345 PF03143 Elongation factor Tu C-terminal domain KB228_RS10345 PF03144 Elongation factor Tu domain 2 KB228_RS10350 PF03144 Elongation factor Tu domain 2 KB228_RS10350 PF00679 Elongation factor G C-terminus KB228_RS10350 PF14492 Elongation Factor G, domain II KB228_RS10350 PF03764 Elongation factor G, domain IV KB228_RS10350 PF00009 Elongation factor Tu GTP binding domain KB228_RS10355 PF00177 Ribosomal protein S7p/S5e KB228_RS10360 PF00164 Ribosomal protein S12/S23 KB228_RS10365 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KB228_RS10370 PF04998 RNA polymerase Rpb1, domain 5 KB228_RS10370 PF05000 RNA polymerase Rpb1, domain 4 KB228_RS10370 PF04983 RNA polymerase Rpb1, domain 3 KB228_RS10370 PF00623 RNA polymerase Rpb1, domain 2 KB228_RS10370 PF04997 RNA polymerase Rpb1, domain 1 KB228_RS10375 PF04561 RNA polymerase Rpb2, domain 2 KB228_RS10375 PF04560 RNA polymerase Rpb2, domain 7 KB228_RS10375 PF00562 RNA polymerase Rpb2, domain 6 KB228_RS10375 PF04563 RNA polymerase beta subunit KB228_RS10375 PF10385 RNA polymerase beta subunit external 1 domain KB228_RS10375 PF04565 RNA polymerase Rpb2, domain 3 KB228_RS10380 PF05175 Methyltransferase small domain KB228_RS10385 PF16320 Ribosomal protein L7/L12 dimerisation domain KB228_RS10385 PF00542 Ribosomal protein L7/L12 C-terminal domain KB228_RS10390 PF00466 Ribosomal protein L10 KB228_RS10395 PF00687 Ribosomal protein L1p/L10e family KB228_RS10400 PF00298 Ribosomal protein L11, RNA binding domain KB228_RS10400 PF03946 Ribosomal protein L11, N-terminal domain KB228_RS10405 PF02357 Transcription termination factor nusG KB228_RS10410 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KB228_RS10415 PF00471 Ribosomal protein L33 KB228_RS10425 PF05991 YacP-like NYN domain KB228_RS10430 PF08032 RNA 2'-O ribose methyltransferase substrate binding KB228_RS10430 PF00588 SpoU rRNA Methylase family KB228_RS10435 PF00636 Ribonuclease III domain KB228_RS10440 PF09190 DALR domain KB228_RS10440 PF01406 tRNA synthetases class I (C) catalytic domain KB228_RS10445 PF00132 Bacterial transferase hexapeptide (six repeats) KB228_RS10450 PF00749 tRNA synthetases class I (E and Q), catalytic domain KB228_RS10460 PF18073 Rubredoxin metal binding domain KB228_RS10465 PF00004 ATPase family associated with various cellular activities (AAA) KB228_RS10465 PF07724 AAA domain (Cdc48 subfamily) KB228_RS10465 PF02861 Clp amino terminal domain, pathogenicity island component KB228_RS10465 PF10431 C-terminal, D2-small domain, of ClpB protein KB228_RS10465 PF17871 AAA lid domain KB228_RS10470 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KB228_RS10475 PF02151 UvrB/uvrC motif KB228_RS10480 PF17727 CtsR C-terminal dimerization domain KB228_RS10480 PF05848 CtsR N-terminal HTH domain KB228_RS10485 PF07662 Na+ dependent nucleoside transporter C-terminus KB228_RS10485 PF01773 Na+ dependent nucleoside transporter N-terminus KB228_RS10495 PF01174 SNO glutamine amidotransferase family KB228_RS10500 PF01680 SOR/SNZ family KB228_RS10505 PF00392 Bacterial regulatory proteins, gntR family KB228_RS10505 PF00155 Aminotransferase class I and II KB228_RS10590 PF01336 OB-fold nucleic acid binding domain KB228_RS10590 PF00152 tRNA synthetases class II (D, K and N) KB228_RS10595 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KB228_RS10600 PF02152 Dihydroneopterin aldolase KB228_RS10605 PF00809 Pterin binding enzyme KB228_RS10610 PF00291 Pyridoxal-phosphate dependent enzyme KB228_RS10615 PF01430 Hsp33 protein KB228_RS10620 PF01434 Peptidase family M41 KB228_RS10620 PF06480 FtsH Extracellular KB228_RS10620 PF17862 AAA+ lid domain KB228_RS10620 PF00004 ATPase family associated with various cellular activities (AAA) KB228_RS10625 PF00156 Phosphoribosyl transferase domain KB228_RS10630 PF01171 PP-loop family KB228_RS10630 PF11734 TilS substrate C-terminal domain KB228_RS10635 PF00575 S1 RNA binding domain KB228_RS10645 PF01479 S4 domain KB228_RS10650 PF03819 MazG nucleotide pyrophosphohydrolase domain KB228_RS10650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KB228_RS10655 PF14667 Polysaccharide biosynthesis C-terminal domain KB228_RS10655 PF01943 Polysaccharide biosynthesis protein KB228_RS10660 PF17757 UvrB interaction domain KB228_RS10660 PF03461 TRCF domain KB228_RS10660 PF02559 CarD-like/TRCF domain KB228_RS10660 PF00270 DEAD/DEAH box helicase KB228_RS10660 PF00271 Helicase conserved C-terminal domain KB228_RS10665 PF01195 Peptidyl-tRNA hydrolase KB228_RS10670 PF14693 Ribosomal protein TL5, C-terminal domain KB228_RS10670 PF01386 Ribosomal L25p family KB228_RS10675 PF14572 Phosphoribosyl synthetase-associated domain KB228_RS10675 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KB228_RS10680 PF00132 Bacterial transferase hexapeptide (six repeats) KB228_RS10680 PF00483 Nucleotidyl transferase KB228_RS10685 PF04026 SpoVG KB228_RS10690 PF01042 Endoribonuclease L-PSP KB228_RS10695 PF00156 Phosphoribosyl transferase domain KB228_RS10695 PF09182 Bacterial purine repressor, N-terminal KB228_RS10700 PF08544 GHMP kinases C terminal KB228_RS10700 PF00288 GHMP kinases N terminal domain KB228_RS10705 PF06257 Biofilm formation stimulator VEG KB228_RS10710 PF00398 Ribosomal RNA adenine dimethylase KB228_RS10715 PF13331 Domain of unknown function (DUF4093) KB228_RS10715 PF01751 Toprim domain KB228_RS10720 PF01026 TatD related DNase KB228_RS10725 PF01588 Putative tRNA binding domain KB228_RS10725 PF08264 Anticodon-binding domain of tRNA KB228_RS10725 PF09334 tRNA synthetases class I (M) KB228_RS10730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KB228_RS10735 PF01541 GIY-YIG catalytic domain KB228_RS10740 PF05175 Methyltransferase small domain KB228_RS10745 PF06156 Initiation control protein YabA KB228_RS10750 PF04468 PSP1 C-terminal conserved region KB228_RS10755 PF09115 DNA polymerase III, delta subunit, C terminal KB228_RS10760 PF06153 Cyclic-di-AMP receptor KB228_RS10765 PF02223 Thymidylate kinase KB228_RS10770 PF01276 Orn/Lys/Arg decarboxylase, major domain KB228_RS10770 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KB228_RS10775 PF13302 Acetyltransferase (GNAT) domain KB228_RS10795 PF13662 Toprim domain KB228_RS10795 PF02132 RecR protein KB228_RS10800 PF02575 YbaB/EbfC DNA-binding family KB228_RS10805 PF12169 DNA polymerase III subunits gamma and tau domain III KB228_RS10825 PF03601 Conserved hypothetical protein 698 KB228_RS10830 PF03466 LysR substrate binding domain KB228_RS10830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KB228_RS10840 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS10840 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KB228_RS10845 PF01493 GXGXG motif KB228_RS10845 PF00310 Glutamine amidotransferases class-II KB228_RS10845 PF04898 Glutamate synthase central domain KB228_RS10845 PF01645 Conserved region in glutamate synthase KB228_RS10850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KB228_RS10850 PF03466 LysR substrate binding domain KB228_RS10865 PF00293 NUDIX domain KB228_RS10875 PF00534 Glycosyl transferases group 1 KB228_RS10875 PF09318 Glycosyl transferase 1 domain A KB228_RS10880 PF05257 CHAP domain KB228_RS10880 PF01476 LysM domain KB228_RS10885 PF03180 NLPA lipoprotein KB228_RS10890 PF00528 Binding-protein-dependent transport system inner membrane component KB228_RS10895 PF00005 ABC transporter KB228_RS10895 PF09383 NIL domain KB228_RS10900 PF01053 Cys/Met metabolism PLP-dependent enzyme KB228_RS10905 PF00291 Pyridoxal-phosphate dependent enzyme KB228_RS10915 PF00209 Sodium:neurotransmitter symporter family KB228_RS10925 PF12146 Serine aminopeptidase, S33 KB228_RS10940 PF10057 Uncharacterized conserved protein (DUF2294) KB228_RS10945 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KB228_RS10950 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KB228_RS10950 PF00361 Proton-conducting membrane transporter KB228_RS10965 PF07683 Cobalamin synthesis protein cobW C-terminal domain KB228_RS10965 PF02492 CobW/HypB/UreG, nucleotide-binding domain KB228_RS10995 PF01022 Bacterial regulatory protein, arsR family KB228_RS11035 PF00958 GMP synthase C terminal domain KB228_RS11035 PF00117 Glutamine amidotransferase class-I KB228_RS11040 PF00571 CBS domain KB228_RS11040 PF00478 IMP dehydrogenase / GMP reductase domain KB228_RS11045 PF00860 Permease family KB228_RS11055 PF11181 Heat induced stress protein YflT KB228_RS11070 PF00375 Sodium:dicarboxylate symporter family KB228_RS11075 PF00881 Nitroreductase family KB228_RS11085 PF00578 AhpC/TSA family KB228_RS11090 PF07992 Pyridine nucleotide-disulphide oxidoreductase KB228_RS11090 PF13192 Thioredoxin domain KB228_RS11105 PF00300 Histidine phosphatase superfamily (branch 1) KB228_RS11110 PF01810 LysE type translocator KB228_RS11130 PF01084 Ribosomal protein S18 KB228_RS11135 PF00436 Single-strand binding protein family KB228_RS11140 PF01250 Ribosomal protein S6 KB228_RS11155 PF06071 Protein of unknown function (DUF933) KB228_RS11155 PF01926 50S ribosome-binding GTPase KB228_RS11160 PF06107 Bacterial protein of unknown function (DUF951) KB228_RS11165 PF00924 Mechanosensitive ion channel KB228_RS11170 PF17762 HTH domain found in ParB protein KB228_RS11170 PF02195 ParB-like nuclease domain KB228_RS11175 PF01053 Cys/Met metabolism PLP-dependent enzyme KB228_RS11180 PF01053 Cys/Met metabolism PLP-dependent enzyme KB228_RS11185 PF02219 Methylenetetrahydrofolate reductase KB228_RS11185 PF02574 Homocysteine S-methyltransferase KB228_RS11190 PF01717 Cobalamin-independent synthase, Catalytic domain KB228_RS11190 PF08267 Cobalamin-independent synthase, N-terminal domain KB228_RS11200 PF00108 Thiolase, N-terminal domain KB228_RS11200 PF02803 Thiolase, C-terminal domain KB228_RS11215 PF01381 Helix-turn-helix KB228_RS11230 PF17961 Bacterial Ig domain KB228_RS11230 PF17210 SdrD B-like domain KB228_RS11230 PF04650 YSIRK type signal peptide KB228_RS11230 PF00746 LPXTG cell wall anchor motif KB228_RS11240 PF10502 Signal peptidase, peptidase S26 KB228_RS11255 PF00005 ABC transporter KB228_RS11260 PF02687 FtsX-like permease family KB228_RS11270 PF04650 YSIRK type signal peptide KB228_RS11275 PF02687 FtsX-like permease family KB228_RS11275 PF12704 MacB-like periplasmic core domain KB228_RS11280 PF00005 ABC transporter KB228_RS11315 PF17762 HTH domain found in ParB protein KB228_RS11315 PF02195 ParB-like nuclease domain KB228_RS11320 PF02527 rRNA small subunit methyltransferase G KB228_RS11325 PF13932 GidA associated domain KB228_RS11325 PF01134 Glucose inhibited division protein A KB228_RS11330 PF01926 50S ribosome-binding GTPase KB228_RS11330 PF12631 MnmE helical domain KB228_RS11330 PF10396 GTP-binding protein TrmE N-terminus KB228_RS11335 PF00825 Ribonuclease P KB228_RS11340 PF00468 Ribosomal protein L34 KB228_RS11385 PF10502 Signal peptidase, peptidase S26 KB228_RS11390 PF01051 Initiator Replication protein KB228_RS11395 PF01076 Plasmid recombination enzyme KB228_RS11400 PF02486 Replication initiation factor