CFE88_RS00010	PWY-3781	aerobic respiration I (cytochrome c)
CFE88_RS00010	PWY-4521	arsenite oxidation I (respiratory)
CFE88_RS00010	PWY-6692	Fe(II) oxidation
CFE88_RS00010	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFE88_RS00055	PWY-7254	TCA cycle VII (acetate-producers)
CFE88_RS00145	PWY-5123	<i>trans, trans</i>-farnesyl diphosphate biosynthesis
CFE88_RS00145	PWY-6174	mevalonate pathway II (archaea)
CFE88_RS00145	PWY-6383	mono-<i>trans</i>, poly-<i>cis</i> decaprenyl phosphate biosynthesis
CFE88_RS00145	PWY-6859	<i>all-trans</i>-farnesol biosynthesis
CFE88_RS00145	PWY-7102	bisabolene biosynthesis
CFE88_RS00145	PWY-7391	isoprene biosynthesis II (engineered)
CFE88_RS00145	PWY-7524	mevalonate pathway III (archaea)
CFE88_RS00145	PWY-7560	methylerythritol phosphate pathway II
CFE88_RS00145	PWY-922	mevalonate pathway I
CFE88_RS00180	PWY-4261	glycerol degradation I
CFE88_RS00195	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFE88_RS00195	PWY-5723	Rubisco shunt
CFE88_RS00330	PWY-1881	formate oxidation to CO<sub>2</sub>
CFE88_RS00330	PWY-5497	purine nucleobases degradation II (anaerobic)
CFE88_RS00330	PWY-6696	oxalate degradation III
CFE88_RS00380	PWY-5667	CDP-diacylglycerol biosynthesis I
CFE88_RS00380	PWY-5981	CDP-diacylglycerol biosynthesis III
CFE88_RS00435	PWY-5704	urea degradation II
CFE88_RS00440	PWY-5704	urea degradation II
CFE88_RS00445	PWY-5704	urea degradation II
CFE88_RS00510	PWY-6823	molybdenum cofactor biosynthesis
CFE88_RS00520	PWY-6823	molybdenum cofactor biosynthesis
CFE88_RS00530	PWY-5964	guanylyl molybdenum cofactor biosynthesis
CFE88_RS00530	PWY-7639	bis(guanylyl molybdenum cofactor) biosynthesis
CFE88_RS00720	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS00805	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CFE88_RS00805	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CFE88_RS00810	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CFE88_RS00810	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CFE88_RS00820	PWY-6619	adenine and adenosine salvage VI
CFE88_RS00880	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFE88_RS01005	PWY-6749	CMP-legionaminate biosynthesis I
CFE88_RS01010	PWY-6749	CMP-legionaminate biosynthesis I
CFE88_RS01050	PWY-3861	mannitol degradation II
CFE88_RS01050	PWY-3881	mannitol biosynthesis
CFE88_RS01050	PWY-5659	GDP-mannose biosynthesis
CFE88_RS01050	PWY-6992	1,5-anhydrofructose degradation
CFE88_RS01050	PWY-7456	mannan degradation
CFE88_RS01050	PWY-7586	&beta;-1,4-D-mannosyl-<i>N</i>-acetyl-D-glucosamine degradation
CFE88_RS01050	PWY-882	L-ascorbate biosynthesis I (L-galactose pathway)
CFE88_RS01080	PWY-4202	arsenate detoxification I (glutaredoxin)
CFE88_RS01080	PWY-5532	adenosine nucleotides degradation IV
CFE88_RS01080	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CFE88_RS01080	PWY-6608	guanosine nucleotides degradation III
CFE88_RS01080	PWY-6609	adenine and adenosine salvage III
CFE88_RS01080	PWY-6611	adenine and adenosine salvage V
CFE88_RS01080	PWY-6620	guanine and guanosine salvage
CFE88_RS01080	PWY-6627	salinosporamide A biosynthesis
CFE88_RS01080	PWY-6644	fluoroacetate and fluorothreonine biosynthesis
CFE88_RS01080	PWY-7179	purine deoxyribonucleosides degradation I
CFE88_RS01080	PWY-7179-1	purine deoxyribonucleosides degradation
CFE88_RS01085	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
CFE88_RS01090	PWY-7181	pyrimidine deoxyribonucleosides degradation
CFE88_RS01095	PWY-7180	2'-deoxy-&alpha;-D-ribose 1-phosphate degradation
CFE88_RS01105	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CFE88_RS01105	PWY-6153	autoinducer AI-2 biosynthesis I
CFE88_RS01105	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CFE88_RS01125	PWY-3961	phosphopantothenate biosynthesis II
CFE88_RS01140	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CFE88_RS01140	PWY-7177	UTP and CTP dephosphorylation II
CFE88_RS01140	PWY-7185	UTP and CTP dephosphorylation I
CFE88_RS01150	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS01150	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFE88_RS01150	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS01150	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFE88_RS01150	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFE88_RS01155	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFE88_RS01155	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFE88_RS01165	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS01175	PWY-7199	pyrimidine deoxyribonucleosides salvage
CFE88_RS01210	PWY-1622	formaldehyde assimilation I (serine pathway)
CFE88_RS01210	PWY-181	photorespiration
CFE88_RS01210	PWY-2161	folate polyglutamylation
CFE88_RS01210	PWY-2201	folate transformations I
CFE88_RS01210	PWY-3661	glycine betaine degradation I
CFE88_RS01210	PWY-3661-1	glycine betaine degradation II (mammalian)
CFE88_RS01210	PWY-3841	folate transformations II
CFE88_RS01210	PWY-5497	purine nucleobases degradation II (anaerobic)
CFE88_RS01215	PWY-7183	pyrimidine nucleobases salvage I
CFE88_RS01250	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS01260	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS01275	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFE88_RS01275	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFE88_RS01280	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFE88_RS01280	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFE88_RS01280	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFE88_RS01280	PWY-5994	palmitate biosynthesis I (animals and fungi)
CFE88_RS01280	PWY-6113	superpathway of mycolate biosynthesis
CFE88_RS01280	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFE88_RS01280	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFE88_RS01280	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFE88_RS01280	PWY-7663	gondoate biosynthesis (anaerobic)
CFE88_RS01280	PWY-7664	oleate biosynthesis IV (anaerobic)
CFE88_RS01280	PWY-7858	CFE88_RS01280
CFE88_RS01280	PWYG-321	mycolate biosynthesis
CFE88_RS01300	PWY-6899	base-degraded thiamin salvage
CFE88_RS01300	PWY-7356	thiamin salvage IV (yeast)
CFE88_RS01305	PWY-6910	hydroxymethylpyrimidine salvage
CFE88_RS01305	PWY-7356	thiamin salvage IV (yeast)
CFE88_RS01305	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFE88_RS01310	PWY-6897	thiamin salvage II
CFE88_RS01310	PWY-7356	thiamin salvage IV (yeast)
CFE88_RS01310	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFE88_RS01315	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CFE88_RS01315	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CFE88_RS01315	PWY-6897	thiamin salvage II
CFE88_RS01315	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CFE88_RS01315	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CFE88_RS01315	PWY-7356	thiamin salvage IV (yeast)
CFE88_RS01315	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFE88_RS01355	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFE88_RS01355	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFE88_RS01360	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFE88_RS01360	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFE88_RS01385	PWY-6012	acyl carrier protein metabolism I
CFE88_RS01385	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CFE88_RS01390	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFE88_RS01480	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CFE88_RS01485	PWY-6871	3-methylbutanol biosynthesis
CFE88_RS01490	PWY-5103	L-isoleucine biosynthesis III
CFE88_RS01490	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFE88_RS01500	PWY-5101	L-isoleucine biosynthesis II
CFE88_RS01500	PWY-5103	L-isoleucine biosynthesis III
CFE88_RS01500	PWY-5104	L-isoleucine biosynthesis IV
CFE88_RS01500	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CFE88_RS01500	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CFE88_RS01500	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CFE88_RS01500	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFE88_RS01505	PWY-5101	L-isoleucine biosynthesis II
CFE88_RS01505	PWY-5103	L-isoleucine biosynthesis III
CFE88_RS01505	PWY-5104	L-isoleucine biosynthesis IV
CFE88_RS01505	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFE88_RS01515	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CFE88_RS01515	PWY-5368	dimorphecolate biosynthesis
CFE88_RS01515	PWY-5995	linoleate biosynthesis I (plants)
CFE88_RS01515	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CFE88_RS01515	PWY-6803	phosphatidylcholine acyl editing
CFE88_RS01515	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CFE88_RS01515	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CFE88_RS01515	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CFE88_RS01515	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CFE88_RS01515	PWY-7470	phosphatidylcholine biosynthesis VII
CFE88_RS01515	PWY-7618	ricinoleate biosynthesis
CFE88_RS01525	PWY-5353	arachidonate biosynthesis I (lower eukaryotes)
CFE88_RS01525	PWY-5368	dimorphecolate biosynthesis
CFE88_RS01525	PWY-5995	linoleate biosynthesis I (plants)
CFE88_RS01525	PWY-6433	hydroxylated fatty acid biosynthesis (plants)
CFE88_RS01525	PWY-6803	phosphatidylcholine acyl editing
CFE88_RS01525	PWY-6958	icosapentaenoate biosynthesis I (lower eukaryotes)
CFE88_RS01525	PWY-7053	docosahexaenoate biosynthesis I (lower eukaryotes)
CFE88_RS01525	PWY-7409	phospholipid remodeling (phosphatidylethanolamine, yeast)
CFE88_RS01525	PWY-7416	phospholipid remodeling (phosphatidylcholine, yeast)
CFE88_RS01525	PWY-7470	phosphatidylcholine biosynthesis VII
CFE88_RS01525	PWY-7618	ricinoleate biosynthesis
CFE88_RS01745	PWY-7805	CFE88_RS01745
CFE88_RS01745	PWY-7807	CFE88_RS01745
CFE88_RS01760	PWY-7432	L-phenylalanine biosynthesis III (cytosolic, plants)
CFE88_RS01770	PWY-5381	pyridine nucleotide cycling (plants)
CFE88_RS01790	PWY-6123	inosine-5'-phosphate biosynthesis I
CFE88_RS01790	PWY-6124	inosine-5'-phosphate biosynthesis II
CFE88_RS01790	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS01790	PWY-7234	inosine-5'-phosphate biosynthesis III
CFE88_RS01830	PWY-5921	glutaminyl-tRNA<sup>gln</sup> biosynthesis via transamidation
CFE88_RS01890	PWY-7799	CFE88_RS01890
CFE88_RS01890	PWY-7800	CFE88_RS01890
CFE88_RS02010	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFE88_RS02200	PWY-6700	queuosine biosynthesis
CFE88_RS02205	PWY-6004	glycine betaine biosynthesis V (from glycine)
CFE88_RS02225	PWY-5392	reductive TCA cycle II
CFE88_RS02225	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFE88_RS02225	PWY-5690	TCA cycle II (plants and fungi)
CFE88_RS02225	PWY-5913	TCA cycle VI (obligate autotrophs)
CFE88_RS02225	PWY-6728	methylaspartate cycle
CFE88_RS02225	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFE88_RS02225	PWY-7254	TCA cycle VII (acetate-producers)
CFE88_RS02225	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CFE88_RS02325	PWY-5531	chlorophyllide <i>a</i> biosynthesis II (anaerobic)
CFE88_RS02325	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CFE88_RS02325	PWY-7766	CFE88_RS02325
CFE88_RS02335	PWY-7159	chlorophyllide <i>a</i> biosynthesis III (aerobic, light independent)
CFE88_RS02405	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFE88_RS02410	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS02410	PWY-1622	formaldehyde assimilation I (serine pathway)
CFE88_RS02410	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFE88_RS02410	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS02410	PWY-5723	Rubisco shunt
CFE88_RS02410	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFE88_RS02410	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFE88_RS02410	PWY-6886	1-butanol autotrophic biosynthesis
CFE88_RS02410	PWY-6901	superpathway of glucose and xylose degradation
CFE88_RS02410	PWY-7003	glycerol degradation to butanol
CFE88_RS02410	PWY-7124	ethylene biosynthesis V (engineered)
CFE88_RS02410	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFE88_RS02420	PWY-6502	oxidized GTP and dGTP detoxification
CFE88_RS02430	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFE88_RS02430	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CFE88_RS02435	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CFE88_RS02435	PWY-5912	2'-deoxymugineic acid phytosiderophore biosynthesis
CFE88_RS02465	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFE88_RS02465	PWY-5723	Rubisco shunt
CFE88_RS02505	PWY-5525	D-glucuronate degradation I
CFE88_RS02510	PWY-6167	flavin biosynthesis II (archaea)
CFE88_RS02510	PWY-6168	flavin biosynthesis III (fungi)
CFE88_RS02510	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS02515	PWY-6167	flavin biosynthesis II (archaea)
CFE88_RS02515	PWY-6168	flavin biosynthesis III (fungi)
CFE88_RS02515	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CFE88_RS02520	PWY-6167	flavin biosynthesis II (archaea)
CFE88_RS02520	PWY-6168	flavin biosynthesis III (fungi)
CFE88_RS02525	PWY-5737	(5<i>R</i>)-carbapenem carboxylate biosynthesis
CFE88_RS02525	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CFE88_RS02640	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFE88_RS02640	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFE88_RS02655	PWY-1269	CMP-3-deoxy-D-<I>manno</I>-octulosonate biosynthesis I
CFE88_RS02655	PWY-3461	L-tyrosine biosynthesis II
CFE88_RS02655	PWY-3462	L-phenylalanine biosynthesis II
CFE88_RS02655	PWY-6120	L-tyrosine biosynthesis III
CFE88_RS02655	PWY-6164	3-dehydroquinate biosynthesis I
CFE88_RS02655	PWY-6627	salinosporamide A biosynthesis
CFE88_RS02655	PWY-7626	bacilysin biosynthesis
CFE88_RS02655	PWY-7674	CMP-8-amino-3,8-dideoxy-D-<I>manno</I>-octulosonate biosynthesis
CFE88_RS02665	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CFE88_RS02665	PWY-2161	folate polyglutamylation
CFE88_RS02665	PWY-2201	folate transformations I
CFE88_RS02665	PWY-3841	folate transformations II
CFE88_RS02705	PWY-6832	2-aminoethylphosphonate degradation II
CFE88_RS02740	PWY-6823	molybdenum cofactor biosynthesis
CFE88_RS02740	PWY-6891	thiazole biosynthesis II (Bacillus)
CFE88_RS02740	PWY-6892	thiazole biosynthesis I (E. coli)
CFE88_RS02740	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CFE88_RS02765	PWY-5482	pyruvate fermentation to acetate II
CFE88_RS02765	PWY-5485	pyruvate fermentation to acetate IV
CFE88_RS02765	PWY-5497	purine nucleobases degradation II (anaerobic)
CFE88_RS02795	PWY-1281	sulfoacetaldehyde degradation I
CFE88_RS02795	PWY-5482	pyruvate fermentation to acetate II
CFE88_RS02795	PWY-5485	pyruvate fermentation to acetate IV
CFE88_RS02795	PWY-5497	purine nucleobases degradation II (anaerobic)
CFE88_RS02795	PWY-6637	sulfolactate degradation II
CFE88_RS02800	PWY-7805	CFE88_RS02800
CFE88_RS02800	PWY-7807	CFE88_RS02800
CFE88_RS02815	PWY-6679	jadomycin biosynthesis
CFE88_RS02815	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFE88_RS02820	PWY-6679	jadomycin biosynthesis
CFE88_RS02820	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFE88_RS02825	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS02825	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFE88_RS02825	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS02825	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFE88_RS02830	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS02830	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFE88_RS02830	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS02830	PWY-5723	Rubisco shunt
CFE88_RS02830	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFE88_RS02830	PWY-6886	1-butanol autotrophic biosynthesis
CFE88_RS02830	PWY-6901	superpathway of glucose and xylose degradation
CFE88_RS02830	PWY-7003	glycerol degradation to butanol
CFE88_RS02830	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFE88_RS02830	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFE88_RS02845	PWY-5913	TCA cycle VI (obligate autotrophs)
CFE88_RS02845	PWY-6549	L-glutamine biosynthesis III
CFE88_RS02845	PWY-6728	methylaspartate cycle
CFE88_RS02845	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFE88_RS02845	PWY-7124	ethylene biosynthesis V (engineered)
CFE88_RS02845	PWY-7254	TCA cycle VII (acetate-producers)
CFE88_RS02845	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFE88_RS02870	PWY-7851	CFE88_RS02870
CFE88_RS02880	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS02880	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS02880	PWY-6901	superpathway of glucose and xylose degradation
CFE88_RS02880	PWY-7003	glycerol degradation to butanol
CFE88_RS02950	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFE88_RS02960	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFE88_RS02960	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CFE88_RS02965	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFE88_RS02965	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CFE88_RS02970	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFE88_RS02970	PWY-5189	tetrapyrrole biosynthesis II (from glycine)
CFE88_RS02975	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFE88_RS02995	PWY-2161	folate polyglutamylation
CFE88_RS03070	PWY-6700	queuosine biosynthesis
CFE88_RS03075	PWY-6700	queuosine biosynthesis
CFE88_RS03090	PWY-7805	CFE88_RS03090
CFE88_RS03090	PWY-7807	CFE88_RS03090
CFE88_RS03095	PWY-6605	adenine and adenosine salvage II
CFE88_RS03095	PWY-6610	adenine and adenosine salvage IV
CFE88_RS03095	PWY-7805	CFE88_RS03095
CFE88_RS03095	PWY-7807	CFE88_RS03095
CFE88_RS03160	PWY-6823	molybdenum cofactor biosynthesis
CFE88_RS03160	PWY-6891	thiazole biosynthesis II (Bacillus)
CFE88_RS03160	PWY-6892	thiazole biosynthesis I (E. coli)
CFE88_RS03160	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CFE88_RS03215	PWY-7193	pyrimidine ribonucleosides salvage I
CFE88_RS03255	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CFE88_RS03255	PWY-6153	autoinducer AI-2 biosynthesis I
CFE88_RS03255	PWY-6154	autoinducer AI-2 biosynthesis II (<i>Vibrio</i>)
CFE88_RS03270	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFE88_RS03280	PWY-5381	pyridine nucleotide cycling (plants)
CFE88_RS03280	PWY-5653	NAD biosynthesis from 2-amino-3-carboxymuconate semialdehyde
CFE88_RS03280	PWY-7761	CFE88_RS03280
CFE88_RS03305	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFE88_RS03365	PWY-2201	folate transformations I
CFE88_RS03405	PWY-7039	phosphatidate metabolism, as a signaling molecule
CFE88_RS03405	PWY-7817	CFE88_RS03405
CFE88_RS03410	PWY-6556	pyrimidine ribonucleosides salvage II
CFE88_RS03410	PWY-7181	pyrimidine deoxyribonucleosides degradation
CFE88_RS03410	PWY-7193	pyrimidine ribonucleosides salvage I
CFE88_RS03410	PWY-7199	pyrimidine deoxyribonucleosides salvage
CFE88_RS03485	PWY-6854	ethylene biosynthesis III (microbes)
CFE88_RS03520	PWY-2722	trehalose degradation IV
CFE88_RS03520	PWY-2723	trehalose degradation V
CFE88_RS03520	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CFE88_RS03520	PWY-5661	GDP-glucose biosynthesis
CFE88_RS03520	PWY-621	sucrose degradation III (sucrose invertase)
CFE88_RS03520	PWY-7238	sucrose biosynthesis II
CFE88_RS03520	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFE88_RS03570	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFE88_RS03600	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CFE88_RS03600	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CFE88_RS03625	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFE88_RS03625	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFE88_RS03630	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFE88_RS03635	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFE88_RS03635	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFE88_RS03690	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CFE88_RS03690	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CFE88_RS03740	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFE88_RS03750	PWY-3341	L-proline biosynthesis III
CFE88_RS03750	PWY-4981	L-proline biosynthesis II (from arginine)
CFE88_RS03750	PWY-6344	L-ornithine degradation II (Stickland reaction)
CFE88_RS03850	PWY-7205	CMP phosphorylation
CFE88_RS03865	PWY-5667	CDP-diacylglycerol biosynthesis I
CFE88_RS03865	PWY-5981	CDP-diacylglycerol biosynthesis III
CFE88_RS03880	PWY-5839	menaquinol-7 biosynthesis
CFE88_RS03880	PWY-5844	menaquinol-9 biosynthesis
CFE88_RS03880	PWY-5849	menaquinol-6 biosynthesis
CFE88_RS03880	PWY-5890	menaquinol-10 biosynthesis
CFE88_RS03880	PWY-5891	menaquinol-11 biosynthesis
CFE88_RS03880	PWY-5892	menaquinol-12 biosynthesis
CFE88_RS03880	PWY-5895	menaquinol-13 biosynthesis
CFE88_RS03890	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFE88_RS03890	PWY-7176	UTP and CTP <i>de novo</i> biosynthesis
CFE88_RS03890	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFE88_RS03890	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFE88_RS03890	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CFE88_RS03890	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFE88_RS03890	PWY-7205	CMP phosphorylation
CFE88_RS03890	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFE88_RS03890	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFE88_RS03890	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS03890	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFE88_RS03890	PWY-7224	purine deoxyribonucleosides salvage
CFE88_RS03890	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFE88_RS03890	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CFE88_RS03895	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFE88_RS03900	PWY-6164	3-dehydroquinate biosynthesis I
CFE88_RS03905	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFE88_RS04005	PWY-6825	phosphatidylcholine biosynthesis V
CFE88_RS04070	PWY-3841	folate transformations II
CFE88_RS04070	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFE88_RS04070	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFE88_RS04070	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFE88_RS04070	PWY-7199	pyrimidine deoxyribonucleosides salvage
CFE88_RS04070	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFE88_RS04075	PWY-3841	folate transformations II
CFE88_RS04075	PWY-6614	tetrahydrofolate biosynthesis
CFE88_RS04120	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFE88_RS04120	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CFE88_RS04120	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFE88_RS04120	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFE88_RS04150	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CFE88_RS04155	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CFE88_RS04235	PWY-2941	L-lysine biosynthesis II
CFE88_RS04235	PWY-2942	L-lysine biosynthesis III
CFE88_RS04235	PWY-5097	L-lysine biosynthesis VI
CFE88_RS04240	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFE88_RS04250	PWY-2941	L-lysine biosynthesis II
CFE88_RS04255	PWY-2941	L-lysine biosynthesis II
CFE88_RS04255	PWY-2942	L-lysine biosynthesis III
CFE88_RS04255	PWY-5097	L-lysine biosynthesis VI
CFE88_RS04260	PWY-2941	L-lysine biosynthesis II
CFE88_RS04260	PWY-2942	L-lysine biosynthesis III
CFE88_RS04260	PWY-5097	L-lysine biosynthesis VI
CFE88_RS04265	PWY-2941	L-lysine biosynthesis II
CFE88_RS04265	PWY-2942	L-lysine biosynthesis III
CFE88_RS04265	PWY-5097	L-lysine biosynthesis VI
CFE88_RS04265	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFE88_RS04265	PWY-6559	spermidine biosynthesis II
CFE88_RS04265	PWY-6562	norspermidine biosynthesis
CFE88_RS04265	PWY-7153	grixazone biosynthesis
CFE88_RS04265	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFE88_RS04270	PWY-2941	L-lysine biosynthesis II
CFE88_RS04270	PWY-2942	L-lysine biosynthesis III
CFE88_RS04270	PWY-5097	L-lysine biosynthesis VI
CFE88_RS04270	PWY-6559	spermidine biosynthesis II
CFE88_RS04270	PWY-6562	norspermidine biosynthesis
CFE88_RS04270	PWY-7153	grixazone biosynthesis
CFE88_RS04395	PWY-5958	acridone alkaloid biosynthesis
CFE88_RS04395	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFE88_RS04395	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFE88_RS04400	PWY-5958	acridone alkaloid biosynthesis
CFE88_RS04400	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFE88_RS04400	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFE88_RS04405	PWY-7303	3-dimethylallyl-4-hydroxybenzoate biosynthesis
CFE88_RS04510	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFE88_RS04510	PWY-5723	Rubisco shunt
CFE88_RS04510	PWY-6891	thiazole biosynthesis II (Bacillus)
CFE88_RS04510	PWY-6892	thiazole biosynthesis I (E. coli)
CFE88_RS04510	PWY-6901	superpathway of glucose and xylose degradation
CFE88_RS04510	PWY-7560	methylerythritol phosphate pathway II
CFE88_RS04575	PWY-702	L-methionine biosynthesis II
CFE88_RS04590	PWY-2941	L-lysine biosynthesis II
CFE88_RS04590	PWY-2942	L-lysine biosynthesis III
CFE88_RS04590	PWY-5097	L-lysine biosynthesis VI
CFE88_RS04590	PWY-6559	spermidine biosynthesis II
CFE88_RS04590	PWY-6562	norspermidine biosynthesis
CFE88_RS04590	PWY-7153	grixazone biosynthesis
CFE88_RS04900	PWY-381	nitrate reduction II (assimilatory)
CFE88_RS04900	PWY-5675	nitrate reduction V (assimilatory)
CFE88_RS04900	PWY-6549	L-glutamine biosynthesis III
CFE88_RS04900	PWY-6963	ammonia assimilation cycle I
CFE88_RS04900	PWY-6964	ammonia assimilation cycle II
CFE88_RS04930	PWY-2781	<i>cis</i>-zeatin biosynthesis
CFE88_RS04940	PWY-4261	glycerol degradation I
CFE88_RS04940	PWY-6118	glycerol-3-phosphate shuttle
CFE88_RS04940	PWY-6952	glycerophosphodiester degradation
CFE88_RS04945	PWY-4261	glycerol degradation I
CFE88_RS05000	PWY-5392	reductive TCA cycle II
CFE88_RS05000	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFE88_RS05030	PWY-5269	cardiolipin biosynthesis II
CFE88_RS05030	PWY-5668	cardiolipin biosynthesis I
CFE88_RS05030	PWY-7817	CFE88_RS05030
CFE88_RS05085	PWY-5523	5,6-dimethylbenzimidazole biosynthesis
CFE88_RS05085	PWY-6167	flavin biosynthesis II (archaea)
CFE88_RS05085	PWY-6168	flavin biosynthesis III (fungi)
CFE88_RS05085	PWY-7863	CFE88_RS05085
CFE88_RS05140	PWY-5667	CDP-diacylglycerol biosynthesis I
CFE88_RS05140	PWY-5981	CDP-diacylglycerol biosynthesis III
CFE88_RS05140	PWY-7817	CFE88_RS05140
CFE88_RS05205	PWY-5392	reductive TCA cycle II
CFE88_RS05205	PWY-5537	pyruvate fermentation to acetate V
CFE88_RS05205	PWY-5538	pyruvate fermentation to acetate VI
CFE88_RS05205	PWY-5690	TCA cycle II (plants and fungi)
CFE88_RS05205	PWY-5913	TCA cycle VI (obligate autotrophs)
CFE88_RS05205	PWY-6728	methylaspartate cycle
CFE88_RS05205	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFE88_RS05205	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CFE88_RS05210	PWY-5392	reductive TCA cycle II
CFE88_RS05210	PWY-5537	pyruvate fermentation to acetate V
CFE88_RS05210	PWY-5538	pyruvate fermentation to acetate VI
CFE88_RS05210	PWY-5690	TCA cycle II (plants and fungi)
CFE88_RS05210	PWY-5913	TCA cycle VI (obligate autotrophs)
CFE88_RS05210	PWY-6728	methylaspartate cycle
CFE88_RS05210	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFE88_RS05210	PWY-7384	anaerobic energy metabolism (invertebrates, mitochondrial)
CFE88_RS05245	PWY-6829	tRNA methylation (yeast)
CFE88_RS05245	PWY-7285	methylwyosine biosynthesis
CFE88_RS05245	PWY-7286	7-(3-amino-3-carboxypropyl)-wyosine biosynthesis
CFE88_RS05290	PWY-5367	petroselinate biosynthesis
CFE88_RS05290	PWY-5515	L-arabinose degradation II
CFE88_RS05290	PWY-5525	D-glucuronate degradation I
CFE88_RS05290	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFE88_RS05290	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFE88_RS05290	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFE88_RS05290	PWY-5994	palmitate biosynthesis I (animals and fungi)
CFE88_RS05290	PWY-6113	superpathway of mycolate biosynthesis
CFE88_RS05290	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFE88_RS05290	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFE88_RS05290	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFE88_RS05290	PWY-7663	gondoate biosynthesis (anaerobic)
CFE88_RS05290	PWY-7664	oleate biosynthesis IV (anaerobic)
CFE88_RS05290	PWY-7858	CFE88_RS05290
CFE88_RS05290	PWYG-321	mycolate biosynthesis
CFE88_RS05295	PWY-4381	fatty acid biosynthesis initiation I
CFE88_RS05295	PWY-6799	fatty acid biosynthesis (plant mitochondria)
CFE88_RS05295	PWY-7388	octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast)
CFE88_RS05330	PWY-6898	thiamin salvage III
CFE88_RS05330	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CFE88_RS05330	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CFE88_RS05330	PWY-7356	thiamin salvage IV (yeast)
CFE88_RS05335	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFE88_RS05335	PWY-5723	Rubisco shunt
CFE88_RS05355	PWY-2201	folate transformations I
CFE88_RS05360	PWY-6825	phosphatidylcholine biosynthesis V
CFE88_RS05385	PWY-7851	CFE88_RS05385
CFE88_RS05395	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS05415	PWY-5686	UMP biosynthesis
CFE88_RS05415	PWY-7790	CFE88_RS05415
CFE88_RS05415	PWY-7791	CFE88_RS05415
CFE88_RS05420	PWY-5686	UMP biosynthesis
CFE88_RS05420	PWY-7790	CFE88_RS05420
CFE88_RS05420	PWY-7791	CFE88_RS05420
CFE88_RS05425	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFE88_RS05425	PWY-5686	UMP biosynthesis
CFE88_RS05425	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFE88_RS05425	PWY-7790	CFE88_RS05425
CFE88_RS05425	PWY-7791	CFE88_RS05425
CFE88_RS05430	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFE88_RS05430	PWY-5686	UMP biosynthesis
CFE88_RS05430	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFE88_RS05430	PWY-7790	CFE88_RS05430
CFE88_RS05430	PWY-7791	CFE88_RS05430
CFE88_RS05435	PWY-5686	UMP biosynthesis
CFE88_RS05435	PWY-7790	CFE88_RS05435
CFE88_RS05435	PWY-7791	CFE88_RS05435
CFE88_RS05440	PWY-5686	UMP biosynthesis
CFE88_RS05440	PWY-7790	CFE88_RS05440
CFE88_RS05440	PWY-7791	CFE88_RS05440
CFE88_RS05455	PWY-7183	pyrimidine nucleobases salvage I
CFE88_RS05505	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFE88_RS05530	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFE88_RS05530	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFE88_RS05535	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFE88_RS05535	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFE88_RS05535	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFE88_RS05550	PWY-2201	folate transformations I
CFE88_RS05610	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFE88_RS05610	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFE88_RS05615	PWY-3781	aerobic respiration I (cytochrome c)
CFE88_RS05615	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CFE88_RS05615	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFE88_RS05615	PWY-5690	TCA cycle II (plants and fungi)
CFE88_RS05615	PWY-6728	methylaspartate cycle
CFE88_RS05615	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFE88_RS05615	PWY-7254	TCA cycle VII (acetate-producers)
CFE88_RS05615	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFE88_RS05620	PWY-3781	aerobic respiration I (cytochrome c)
CFE88_RS05620	PWY-4302	aerobic respiration III (alternative oxidase pathway)
CFE88_RS05620	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFE88_RS05620	PWY-5690	TCA cycle II (plants and fungi)
CFE88_RS05620	PWY-6728	methylaspartate cycle
CFE88_RS05620	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFE88_RS05620	PWY-7254	TCA cycle VII (acetate-producers)
CFE88_RS05620	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFE88_RS05715	PWY-7851	CFE88_RS05715
CFE88_RS05770	PWY-5750	itaconate biosynthesis
CFE88_RS05770	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFE88_RS05770	PWY-6146	<i>Methanobacterium thermoautotrophicum</i> biosynthetic metabolism
CFE88_RS05860	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CFE88_RS05860	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CFE88_RS05980	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFE88_RS05980	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFE88_RS05980	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFE88_RS05985	PWY-6123	inosine-5'-phosphate biosynthesis I
CFE88_RS05985	PWY-6124	inosine-5'-phosphate biosynthesis II
CFE88_RS05985	PWY-7234	inosine-5'-phosphate biosynthesis III
CFE88_RS05990	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFE88_RS05990	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CFE88_RS05995	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFE88_RS05995	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFE88_RS05995	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFE88_RS06000	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFE88_RS06000	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFE88_RS06000	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFE88_RS06000	PWY-7282	4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast)
CFE88_RS06005	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFE88_RS06005	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFE88_RS06005	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFE88_RS06010	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFE88_RS06010	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFE88_RS06010	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFE88_RS06015	PWY-6121	5-aminoimidazole ribonucleotide biosynthesis I
CFE88_RS06015	PWY-6122	5-aminoimidazole ribonucleotide biosynthesis II
CFE88_RS06015	PWY-6277	superpathway of 5-aminoimidazole ribonucleotide biosynthesis
CFE88_RS06020	PWY-6123	inosine-5'-phosphate biosynthesis I
CFE88_RS06020	PWY-6124	inosine-5'-phosphate biosynthesis II
CFE88_RS06020	PWY-7234	inosine-5'-phosphate biosynthesis III
CFE88_RS06030	PWY-6123	inosine-5'-phosphate biosynthesis I
CFE88_RS06030	PWY-7234	inosine-5'-phosphate biosynthesis III
CFE88_RS06035	PWY-1722	formate reduction to 5,10-methylenetetrahydrofolate
CFE88_RS06035	PWY-2201	folate transformations I
CFE88_RS06035	PWY-3841	folate transformations II
CFE88_RS06035	PWY-5030	L-histidine degradation III
CFE88_RS06035	PWY-5497	purine nucleobases degradation II (anaerobic)
CFE88_RS06035	PWY-6613	tetrahydrofolate salvage from 5,10-methenyltetrahydrofolate
CFE88_RS06050	PWY-3781	aerobic respiration I (cytochrome c)
CFE88_RS06050	PWY-4521	arsenite oxidation I (respiratory)
CFE88_RS06050	PWY-6692	Fe(II) oxidation
CFE88_RS06050	PWY-7279	aerobic respiration II (cytochrome c) (yeast)
CFE88_RS06120	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFE88_RS06125	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFE88_RS06130	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFE88_RS06135	PWY-5837	1,4-dihydroxy-2-naphthoate biosynthesis I
CFE88_RS06135	PWY-5901	2,3-dihydroxybenzoate biosynthesis
CFE88_RS06135	PWY-6406	salicylate biosynthesis I
CFE88_RS06145	PWY-5839	menaquinol-7 biosynthesis
CFE88_RS06145	PWY-5851	demethylmenaquinol-9 biosynthesis
CFE88_RS06145	PWY-5852	demethylmenaquinol-8 biosynthesis I
CFE88_RS06145	PWY-5853	demethylmenaquinol-6 biosynthesis I
CFE88_RS06145	PWY-5890	menaquinol-10 biosynthesis
CFE88_RS06145	PWY-5891	menaquinol-11 biosynthesis
CFE88_RS06145	PWY-5892	menaquinol-12 biosynthesis
CFE88_RS06145	PWY-5895	menaquinol-13 biosynthesis
CFE88_RS06280	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFE88_RS06280	PWY-6385	peptidoglycan biosynthesis III (mycobacteria)
CFE88_RS06280	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFE88_RS06280	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFE88_RS06280	PWY-6778	laminaribiose degradation
CFE88_RS06280	PWY-7817	CFE88_RS06280
CFE88_RS06305	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFE88_RS06305	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFE88_RS06305	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFE88_RS06305	PWY-6113	superpathway of mycolate biosynthesis
CFE88_RS06305	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFE88_RS06305	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFE88_RS06305	PWY-7663	gondoate biosynthesis (anaerobic)
CFE88_RS06305	PWY-7664	oleate biosynthesis IV (anaerobic)
CFE88_RS06305	PWY-7858	CFE88_RS06305
CFE88_RS06305	PWYG-321	mycolate biosynthesis
CFE88_RS06430	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFE88_RS06435	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFE88_RS06440	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFE88_RS06445	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFE88_RS06535	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CFE88_RS06535	PWY-7268	NAD/NADP-NADH/NADPH cytosolic interconversion (yeast)
CFE88_RS06535	PWY-7269	NAD/NADP-NADH/NADPH mitochondrial interconversion (yeast)
CFE88_RS06635	PWY-4381	fatty acid biosynthesis initiation I
CFE88_RS06710	PWY-3801	sucrose degradation II (sucrose synthase)
CFE88_RS06710	PWY-5054	sorbitol biosynthesis I
CFE88_RS06710	PWY-5384	sucrose degradation IV (sucrose phosphorylase)
CFE88_RS06710	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CFE88_RS06710	PWY-5659	GDP-mannose biosynthesis
CFE88_RS06710	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFE88_RS06710	PWY-621	sucrose degradation III (sucrose invertase)
CFE88_RS06710	PWY-622	starch biosynthesis
CFE88_RS06710	PWY-6981	chitin biosynthesis
CFE88_RS06710	PWY-6992	1,5-anhydrofructose degradation
CFE88_RS06710	PWY-7238	sucrose biosynthesis II
CFE88_RS06710	PWY-7347	sucrose biosynthesis III
CFE88_RS06710	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFE88_RS06715	PWY-4983	L-citrulline-nitric oxide cycle
CFE88_RS06715	PWY-4984	urea cycle
CFE88_RS06715	PWY-5	canavanine biosynthesis
CFE88_RS06715	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFE88_RS06715	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFE88_RS06720	PWY-4983	L-citrulline-nitric oxide cycle
CFE88_RS06720	PWY-4984	urea cycle
CFE88_RS06720	PWY-5	canavanine biosynthesis
CFE88_RS06720	PWY-5154	L-arginine biosynthesis III (via <i>N</i>-acetyl-L-citrulline)
CFE88_RS06720	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFE88_RS06735	PWY-3341	L-proline biosynthesis III
CFE88_RS06735	PWY-4981	L-proline biosynthesis II (from arginine)
CFE88_RS06735	PWY-6344	L-ornithine degradation II (Stickland reaction)
CFE88_RS06735	PWY-6922	L-<i>N<sup>&delta;</sup></i>-acetylornithine biosynthesis
CFE88_RS06900	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CFE88_RS06900	PWY-7382	lipoate biosynthesis and incorporation (pyruvate dehydrogenase and oxoglutarate dehydrogenase, yeast)
CFE88_RS06950	PWY-6823	molybdenum cofactor biosynthesis
CFE88_RS06950	PWY-6891	thiazole biosynthesis II (Bacillus)
CFE88_RS06950	PWY-6892	thiazole biosynthesis I (E. coli)
CFE88_RS06950	PWY-7250	[2Fe-2S] iron-sulfur cluster biosynthesis
CFE88_RS07030	PWY-6163	chorismate biosynthesis from 3-dehydroquinate
CFE88_RS07030	PWY-6416	quinate degradation II
CFE88_RS07030	PWY-6707	gallate biosynthesis
CFE88_RS07275	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS07275	PWY-1622	formaldehyde assimilation I (serine pathway)
CFE88_RS07275	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFE88_RS07275	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS07275	PWY-5723	Rubisco shunt
CFE88_RS07275	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFE88_RS07275	PWY-6886	1-butanol autotrophic biosynthesis
CFE88_RS07275	PWY-6901	superpathway of glucose and xylose degradation
CFE88_RS07275	PWY-7003	glycerol degradation to butanol
CFE88_RS07275	PWY-7124	ethylene biosynthesis V (engineered)
CFE88_RS07275	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFE88_RS07280	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS07280	PWY-2221	Entner-Doudoroff pathway III (semi-phosphorylative)
CFE88_RS07280	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS07280	PWY-5723	Rubisco shunt
CFE88_RS07280	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFE88_RS07280	PWY-6886	1-butanol autotrophic biosynthesis
CFE88_RS07280	PWY-6901	superpathway of glucose and xylose degradation
CFE88_RS07280	PWY-7003	glycerol degradation to butanol
CFE88_RS07280	PWY-7124	ethylene biosynthesis V (engineered)
CFE88_RS07280	PWY-7218	photosynthetic 3-hydroxybutanoate biosynthesis (engineered)
CFE88_RS07285	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS07285	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS07285	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFE88_RS07285	PWY-7003	glycerol degradation to butanol
CFE88_RS07290	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS07290	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS07290	PWY-6886	1-butanol autotrophic biosynthesis
CFE88_RS07290	PWY-6901	superpathway of glucose and xylose degradation
CFE88_RS07290	PWY-7003	glycerol degradation to butanol
CFE88_RS07295	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS07295	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS07295	PWY-6901	superpathway of glucose and xylose degradation
CFE88_RS07295	PWY-7003	glycerol degradation to butanol
CFE88_RS07450	PWY-5265	peptidoglycan biosynthesis II (staphylococci)
CFE88_RS07450	PWY-6470	peptidoglycan biosynthesis V (&beta;-lactam resistance)
CFE88_RS07450	PWY-6471	peptidoglycan biosynthesis IV (Enterococcus faecium)
CFE88_RS07495	PWY-6386	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis II (lysine-containing)
CFE88_RS07495	PWY-6387	UDP-<i>N</i>-acetylmuramoyl-pentapeptide biosynthesis I (<i>meso</i>-diaminopimelate containing)
CFE88_RS07530	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFE88_RS07530	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFE88_RS07530	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFE88_RS07530	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFE88_RS07530	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFE88_RS07530	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFE88_RS07530	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFE88_RS07530	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CFE88_RS07535	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFE88_RS07535	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFE88_RS07535	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFE88_RS07535	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFE88_RS07535	PWY-7220	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFE88_RS07535	PWY-7222	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFE88_RS07535	PWY-7226	guanosine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFE88_RS07535	PWY-7227	adenosine deoxyribonucleotides <i>de novo</i> biosynthesis
CFE88_RS07550	PWY-6700	queuosine biosynthesis
CFE88_RS07565	PWY-3162	L-tryptophan degradation V (side chain pathway)
CFE88_RS07565	PWY-5057	L-valine degradation II
CFE88_RS07565	PWY-5076	L-leucine degradation III
CFE88_RS07565	PWY-5078	L-isoleucine degradation II
CFE88_RS07565	PWY-5079	L-phenylalanine degradation III
CFE88_RS07565	PWY-5082	L-methionine degradation III
CFE88_RS07565	PWY-5480	pyruvate fermentation to ethanol I
CFE88_RS07565	PWY-5486	pyruvate fermentation to ethanol II
CFE88_RS07565	PWY-5751	phenylethanol biosynthesis
CFE88_RS07565	PWY-6313	serotonin degradation
CFE88_RS07565	PWY-6333	acetaldehyde biosynthesis I
CFE88_RS07565	PWY-6342	noradrenaline and adrenaline degradation
CFE88_RS07565	PWY-6587	pyruvate fermentation to ethanol III
CFE88_RS07565	PWY-6802	salidroside biosynthesis
CFE88_RS07565	PWY-6871	3-methylbutanol biosynthesis
CFE88_RS07565	PWY-7013	L-1,2-propanediol degradation
CFE88_RS07565	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFE88_RS07565	PWY-7118	chitin degradation to ethanol
CFE88_RS07565	PWY-7396	butanol and isobutanol biosynthesis (engineered)
CFE88_RS07635	PWY-5958	acridone alkaloid biosynthesis
CFE88_RS07635	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFE88_RS07635	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFE88_RS07640	PWY-5958	acridone alkaloid biosynthesis
CFE88_RS07640	PWY-6660	2-heptyl-3-hydroxy-4(1<i>H</i>)-quinolone biosynthesis
CFE88_RS07640	PWY-6661	4-hydroxy-2(1<i>H</i>)-quinolone biosynthesis
CFE88_RS07645	PWY-6703	preQ<sub>0</sub> biosynthesis
CFE88_RS07655	PWY-6703	preQ<sub>0</sub> biosynthesis
CFE88_RS07705	PWY-6906	chitin derivatives degradation
CFE88_RS07705	PWY-7077	<i>N</i>-acetyl-D-galactosamine degradation
CFE88_RS07705	PWY-7395	D-galactosamine and <i>N</i>-acetyl-D-galactosamine degradation
CFE88_RS07730	PWY-6619	adenine and adenosine salvage VI
CFE88_RS07785	PWY-1622	formaldehyde assimilation I (serine pathway)
CFE88_RS07785	PWY-5392	reductive TCA cycle II
CFE88_RS07785	PWY-561	superpathway of glyoxylate cycle and fatty acid degradation
CFE88_RS07785	PWY-5690	TCA cycle II (plants and fungi)
CFE88_RS07785	PWY-5913	TCA cycle VI (obligate autotrophs)
CFE88_RS07785	PWY-6728	methylaspartate cycle
CFE88_RS07785	PWY-6969	TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
CFE88_RS07785	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CFE88_RS07785	PWY-7383	anaerobic energy metabolism (invertebrates, cytosol)
CFE88_RS07820	PWY-5785	di-<i>trans</i>,poly-<i>cis</i>-undecaprenyl phosphate biosynthesis
CFE88_RS08030	PWY-5067	glycogen biosynthesis II (from UDP-D-Glucose)
CFE88_RS08030	PWY-622	starch biosynthesis
CFE88_RS08030	PWY-7815	CFE88_RS08030
CFE88_RS08030	PWY-7816	CFE88_RS08030
CFE88_RS08030	PWY-7819	CFE88_RS08030
CFE88_RS08285	PWY-7391	isoprene biosynthesis II (engineered)
CFE88_RS08285	PWY-922	mevalonate pathway I
CFE88_RS08290	PWY-7391	isoprene biosynthesis II (engineered)
CFE88_RS08290	PWY-922	mevalonate pathway I
CFE88_RS08295	PWY-6174	mevalonate pathway II (archaea)
CFE88_RS08295	PWY-7391	isoprene biosynthesis II (engineered)
CFE88_RS08295	PWY-922	mevalonate pathway I
CFE88_RS08300	PWY-6987	lipoate biosynthesis and incorporation III (Bacillus)
CFE88_RS08305	PWY-1281	sulfoacetaldehyde degradation I
CFE88_RS08305	PWY-5482	pyruvate fermentation to acetate II
CFE88_RS08305	PWY-5485	pyruvate fermentation to acetate IV
CFE88_RS08305	PWY-5497	purine nucleobases degradation II (anaerobic)
CFE88_RS08305	PWY-6637	sulfolactate degradation II
CFE88_RS08350	PWY-6910	hydroxymethylpyrimidine salvage
CFE88_RS08350	PWY-7356	thiamin salvage IV (yeast)
CFE88_RS08350	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFE88_RS08395	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFE88_RS08395	PWY-5686	UMP biosynthesis
CFE88_RS08395	PWY-7790	CFE88_RS08395
CFE88_RS08395	PWY-7791	CFE88_RS08395
CFE88_RS08395	PWY-7796	CFE88_RS08395
CFE88_RS08400	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CFE88_RS08400	PWY-6855	chitin degradation I (archaea)
CFE88_RS08400	PWY-6906	chitin derivatives degradation
CFE88_RS08415	PWY-5663	tetrahydrobiopterin biosynthesis I
CFE88_RS08415	PWY-5664	tetrahydrobiopterin biosynthesis II
CFE88_RS08415	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CFE88_RS08415	PWY-6703	preQ<sub>0</sub> biosynthesis
CFE88_RS08415	PWY-6983	tetrahydrobiopterin biosynthesis III
CFE88_RS08415	PWY-7442	drosopterin and aurodrosopterin biosynthesis
CFE88_RS08415	PWY-7852	CFE88_RS08415
CFE88_RS08495	PWY-7560	methylerythritol phosphate pathway II
CFE88_RS08500	PWY-5057	L-valine degradation II
CFE88_RS08500	PWY-5076	L-leucine degradation III
CFE88_RS08500	PWY-5078	L-isoleucine degradation II
CFE88_RS08500	PWY-5101	L-isoleucine biosynthesis II
CFE88_RS08500	PWY-5103	L-isoleucine biosynthesis III
CFE88_RS08500	PWY-5104	L-isoleucine biosynthesis IV
CFE88_RS08500	PWY-5108	L-isoleucine biosynthesis V
CFE88_RS08500	PWY-7767	CFE88_RS08500
CFE88_RS08635	PWY-6936	seleno-amino acid biosynthesis
CFE88_RS08635	PWY-7274	D-cycloserine biosynthesis
CFE88_RS08640	PWY-5188	tetrapyrrole biosynthesis I (from glutamate)
CFE88_RS08685	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
CFE88_RS08690	PWY-6466	pyridoxal 5'-phosphate biosynthesis II
CFE88_RS08785	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CFE88_RS08785	PWY-6148	tetrahydromethanopterin biosynthesis
CFE88_RS08785	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CFE88_RS08785	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CFE88_RS08785	PWY-7852	CFE88_RS08785
CFE88_RS08785	PWY-7853	CFE88_RS08785
CFE88_RS08790	PWY-6147	6-hydroxymethyl-dihydropterin diphosphate biosynthesis I
CFE88_RS08790	PWY-6148	tetrahydromethanopterin biosynthesis
CFE88_RS08790	PWY-6797	6-hydroxymethyl-dihydropterin diphosphate biosynthesis II (archaea)
CFE88_RS08790	PWY-7539	6-hydroxymethyl-dihydropterin diphosphate biosynthesis III (Chlamydia)
CFE88_RS08795	PWY-6614	tetrahydrofolate biosynthesis
CFE88_RS08800	PWY-6936	seleno-amino acid biosynthesis
CFE88_RS08815	PWY-6599	guanine and guanosine salvage II
CFE88_RS08815	PWY-6609	adenine and adenosine salvage III
CFE88_RS08815	PWY-6610	adenine and adenosine salvage IV
CFE88_RS08815	PWY-6620	guanine and guanosine salvage
CFE88_RS08855	PWY-6308	L-cysteine biosynthesis II (tRNA-dependent)
CFE88_RS08870	PWY-5514	UDP-<i>N</i>-acetyl-D-galactosamine biosynthesis II
CFE88_RS08870	PWY-5667	CDP-diacylglycerol biosynthesis I
CFE88_RS08870	PWY-6453	stigma estolide biosynthesis
CFE88_RS08870	PWY-7411	superpathway of phosphatidate biosynthesis (yeast)
CFE88_RS08870	PWY-7587	oleate biosynthesis III (cyanobacteria)
CFE88_RS08890	PWY-7560	methylerythritol phosphate pathway II
CFE88_RS08920	PWY-2201	folate transformations I
CFE88_RS08955	PWY-6545	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis III
CFE88_RS08955	PWY-7184	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis I
CFE88_RS08955	PWY-7187	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis II
CFE88_RS08955	PWY-7197	pyrimidine deoxyribonucleotide phosphorylation
CFE88_RS08955	PWY-7198	pyrimidine deoxyribonucleotides <i>de novo</i> biosynthesis IV
CFE88_RS08955	PWY-7210	pyrimidine deoxyribonucleotides biosynthesis from CTP
CFE88_RS09295	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS09300	PWY-5695	urate biosynthesis/inosine 5'-phosphate degradation
CFE88_RS09300	PWY-6596	adenosine nucleotides degradation I
CFE88_RS09300	PWY-7221	guanosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS09520	PWY-2201	folate transformations I
CFE88_RS09520	PWY-3841	folate transformations II
CFE88_RS09525	PWY-5041	<i>S</i>-adenosyl-L-methionine cycle II
CFE88_RS09525	PWY-6151	<i>S</i>-adenosyl-L-methionine cycle I
CFE88_RS09525	PWY-6936	seleno-amino acid biosynthesis
CFE88_RS09525	PWY-702	L-methionine biosynthesis II
CFE88_RS09530	PWY-5651	L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde
CFE88_RS09530	PWY-6309	L-tryptophan degradation XI (mammalian, via kynurenine)
CFE88_RS09530	PWY-7717	CFE88_RS09530
CFE88_RS09530	PWY-7733	CFE88_RS09530
CFE88_RS09530	PWY-7734	CFE88_RS09530
CFE88_RS09530	PWY-7765	CFE88_RS09530
CFE88_RS09735	PWY-6281	L-selenocysteine biosynthesis II (archaea and eukaryotes)
CFE88_RS09755	PWY-5344	L-homocysteine biosynthesis
CFE88_RS09765	PWY-7805	CFE88_RS09765
CFE88_RS09765	PWY-7807	CFE88_RS09765
CFE88_RS09780	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS09825	PWY-6825	phosphatidylcholine biosynthesis V
CFE88_RS09960	PWY-7219	adenosine ribonucleotides <i>de novo</i> biosynthesis
CFE88_RS10000	PWY-4621	arsenate detoxification II (glutaredoxin)
CFE88_RS10090	PWY-7254	TCA cycle VII (acetate-producers)
CFE88_RS10195	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CFE88_RS10210	PWY-6578	8-amino-7-oxononanoate biosynthesis III
CFE88_RS10270	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CFE88_RS10350	PWY-5480	pyruvate fermentation to ethanol I
CFE88_RS10350	PWY-5485	pyruvate fermentation to acetate IV
CFE88_RS10350	PWY-5493	reductive monocarboxylic acid cycle
CFE88_RS10380	PWY-1361	benzoyl-CoA degradation I (aerobic)
CFE88_RS10380	PWY-3602	L-carnitine degradation II
CFE88_RS10380	PWY-5109	2-methylbutanoate biosynthesis
CFE88_RS10380	PWY-5136	fatty acid &beta;-oxidation II (peroxisome)
CFE88_RS10380	PWY-5138	unsaturated, even numbered fatty acid &beta;-oxidation
CFE88_RS10380	PWY-5177	glutaryl-CoA degradation
CFE88_RS10380	PWY-5515	L-arabinose degradation II
CFE88_RS10380	PWY-5525	D-glucuronate degradation I
CFE88_RS10380	PWY-5789	3-hydroxypropanoate/4-hydroxybutanate cycle
CFE88_RS10380	PWY-6435	4-hydroxybenzoate biosynthesis V
CFE88_RS10380	PWY-6583	pyruvate fermentation to butanol I
CFE88_RS10380	PWY-6863	pyruvate fermentation to hexanol
CFE88_RS10380	PWY-6883	pyruvate fermentation to butanol II
CFE88_RS10380	PWY-6944	androstenedione degradation
CFE88_RS10380	PWY-6945	cholesterol degradation to androstenedione I (cholesterol oxidase)
CFE88_RS10380	PWY-6946	cholesterol degradation to androstenedione II (cholesterol dehydrogenase)
CFE88_RS10380	PWY-7007	methyl ketone biosynthesis
CFE88_RS10380	PWY-7046	4-coumarate degradation (anaerobic)
CFE88_RS10380	PWY-7094	fatty acid salvage
CFE88_RS10380	PWY-7216	(R)- and (S)-3-hydroxybutanoate biosynthesis
CFE88_RS10380	PWY-735	jasmonic acid biosynthesis
CFE88_RS10380	PWY-7401	crotonate fermentation (to acetate and cyclohexane carboxylate)
CFE88_RS10380	PWY-7472	D-carnitine degradation II
CFE88_RS10380	PWY-7606	docosahexaenoate biosynthesis III (mammals)
CFE88_RS10380	PWY-7654	(8<i>E</i>,10<i>E</i>)-dodeca-8,10-dienol biosynthesis
CFE88_RS10380	PWY-7656	<i>Spodoptera littoralis</i> pheromone biosynthesis
CFE88_RS10380	PWY-7726	CFE88_RS10380
CFE88_RS10380	PWY-7778	CFE88_RS10380
CFE88_RS10380	PWY-7779	CFE88_RS10380
CFE88_RS10380	PWY-81	toluene degradation to benzoyl-CoA (anaerobic)
CFE88_RS10425	PWY-4981	L-proline biosynthesis II (from arginine)
CFE88_RS10425	PWY-4984	urea cycle
CFE88_RS10425	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFE88_RS10445	PWY-7380	biotin biosynthesis from 8-amino-7-oxononanoate II
CFE88_RS10500	PWY-6012	acyl carrier protein metabolism I
CFE88_RS10500	PWY-6012-1	acyl carrier protein metabolism II (mammalian)
CFE88_RS10545	PWY-5046	2-oxoisovalerate decarboxylation to isobutanoyl-CoA
CFE88_RS10545	PWY-5084	2-oxoglutarate decarboxylation to succinyl-CoA
CFE88_RS10605	PWY-7254	TCA cycle VII (acetate-producers)
CFE88_RS10820	PWY-6619	adenine and adenosine salvage VI
CFE88_RS10835	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CFE88_RS10870	PWY-4981	L-proline biosynthesis II (from arginine)
CFE88_RS10875	PWY-4981	L-proline biosynthesis II (from arginine)
CFE88_RS10875	PWY-4984	urea cycle
CFE88_RS10875	PWY-7400	L-arginine biosynthesis IV (archaebacteria)
CFE88_RS11120	PWY-5083	NAD/NADH phosphorylation and dephosphorylation
CFE88_RS11120	PWY-5491	diethylphosphate degradation
CFE88_RS11215	PWY-6683	sulfate reduction III (assimilatory)
CFE88_RS11220	PWY-6683	sulfate reduction III (assimilatory)
CFE88_RS11225	PWY-5194	siroheme biosynthesis
CFE88_RS11225	PWY-5196	factor 430 biosynthesis
CFE88_RS11225	PWY-5441	S-methyl-L-methionine cycle
CFE88_RS11225	PWY-702	L-methionine biosynthesis II
CFE88_RS11225	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CFE88_RS11230	PWY-5194	siroheme biosynthesis
CFE88_RS11230	PWY-5196	factor 430 biosynthesis
CFE88_RS11230	PWY-5441	S-methyl-L-methionine cycle
CFE88_RS11230	PWY-702	L-methionine biosynthesis II
CFE88_RS11230	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CFE88_RS11240	PWY-5278	sulfite oxidation III
CFE88_RS11240	PWY-5340	sulfate activation for sulfonation
CFE88_RS11240	PWY-6683	sulfate reduction III (assimilatory)
CFE88_RS11240	PWY-6932	selenate reduction
CFE88_RS11245	PWY-5340	sulfate activation for sulfonation
CFE88_RS11280	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CFE88_RS11280	PWY-7494	choline degradation IV
CFE88_RS11285	PWY-3722	glycine betaine biosynthesis II (Gram-positive bacteria)
CFE88_RS11285	PWY-7494	choline degradation IV
CFE88_RS11305	PWY-241	C4 photosynthetic carbon assimilation cycle, NADP-ME type
CFE88_RS11305	PWY-6549	L-glutamine biosynthesis III
CFE88_RS11305	PWY-7115	C4 photosynthetic carbon assimilation cycle, NAD-ME type
CFE88_RS11305	PWY-7117	C4 photosynthetic carbon assimilation cycle, PEPCK type
CFE88_RS11315	PWY-7254	TCA cycle VII (acetate-producers)
CFE88_RS11325	PWY-1042	glycolysis IV (plant cytosol)
CFE88_RS11325	PWY-1861	formaldehyde assimilation II (RuMP Cycle)
CFE88_RS11325	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS11325	PWY-6142	gluconeogenesis II (<i>Methanobacterium thermoautotrophicum</i>)
CFE88_RS11325	PWY-7385	1,3-propanediol biosynthesis (engineered)
CFE88_RS11370	PWY-5481	pyruvate fermentation to lactate
CFE88_RS11370	PWY-6901	superpathway of glucose and xylose degradation
CFE88_RS11375	PWY-5101	L-isoleucine biosynthesis II
CFE88_RS11375	PWY-5103	L-isoleucine biosynthesis III
CFE88_RS11375	PWY-5104	L-isoleucine biosynthesis IV
CFE88_RS11375	PWY-5938	(<i>R</i>)-acetoin biosynthesis I
CFE88_RS11375	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CFE88_RS11375	PWY-6389	(<i>S</i>)-acetoin biosynthesis
CFE88_RS11375	PWY-7111	pyruvate fermentation to isobutanol (engineered)
CFE88_RS11380	PWY-5939	(<i>R</i>)-acetoin biosynthesis II
CFE88_RS11385	PWY-6654	phosphopantothenate biosynthesis III
CFE88_RS11385	PWY-7862	CFE88_RS11385
CFE88_RS11390	PWY-6654	phosphopantothenate biosynthesis III
CFE88_RS11400	PWY-5155	&beta;-alanine biosynthesis III
CFE88_RS11425	PWY-5686	UMP biosynthesis
CFE88_RS11505	PWY-6853	ethylene biosynthesis II (microbes)
CFE88_RS11535	PWY-6174	mevalonate pathway II (archaea)
CFE88_RS11535	PWY-7391	isoprene biosynthesis II (engineered)
CFE88_RS11535	PWY-7524	mevalonate pathway III (archaea)
CFE88_RS11535	PWY-7571	ferrichrome A biosynthesis
CFE88_RS11535	PWY-922	mevalonate pathway I
CFE88_RS11540	PWY-6174	mevalonate pathway II (archaea)
CFE88_RS11540	PWY-7391	isoprene biosynthesis II (engineered)
CFE88_RS11540	PWY-7524	mevalonate pathway III (archaea)
CFE88_RS11540	PWY-922	mevalonate pathway I
CFE88_RS11635	PWY-4041	&gamma;-glutamyl cycle
CFE88_RS11635	PWY-5826	hypoglycin biosynthesis
CFE88_RS11655	PWY-4261	glycerol degradation I
CFE88_RS11755	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS11765	PWY-6891	thiazole biosynthesis II (Bacillus)
CFE88_RS11765	PWY-6892	thiazole biosynthesis I (E. coli)
CFE88_RS11770	PWY-6891	thiazole biosynthesis II (Bacillus)
CFE88_RS11770	PWY-6892	thiazole biosynthesis I (E. coli)
CFE88_RS11785	PWY-6893	thiamin diphosphate biosynthesis II (Bacillus)
CFE88_RS11785	PWY-6894	thiamin diphosphate biosynthesis I (E. coli)
CFE88_RS11785	PWY-6897	thiamin salvage II
CFE88_RS11785	PWY-6907	thiamin diphosphate biosynthesis III (Staphylococcus)
CFE88_RS11785	PWY-6908	thiamin diphosphate biosynthesis IV (eukaryotes)
CFE88_RS11785	PWY-7356	thiamin salvage IV (yeast)
CFE88_RS11785	PWY-7357	thiamin formation from pyrithiamine and oxythiamine (yeast)
CFE88_RS11850	PWY-4261	glycerol degradation I
CFE88_RS11850	PWY-5530	sorbitol biosynthesis II
CFE88_RS11860	PWY-3801	sucrose degradation II (sucrose synthase)
CFE88_RS11860	PWY-6527	stachyose degradation
CFE88_RS11860	PWY-7238	sucrose biosynthesis II
CFE88_RS11860	PWY-7343	UDP-glucose biosynthesis
CFE88_RS11860	PWY-7817	CFE88_RS11860
CFE88_RS11865	PWY-6749	CMP-legionaminate biosynthesis I
CFE88_RS11985	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFE88_RS11985	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFE88_RS11985	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFE88_RS11985	PWY-6113	superpathway of mycolate biosynthesis
CFE88_RS11985	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFE88_RS11985	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFE88_RS11985	PWY-7663	gondoate biosynthesis (anaerobic)
CFE88_RS11985	PWY-7664	oleate biosynthesis IV (anaerobic)
CFE88_RS11985	PWY-7858	CFE88_RS11985
CFE88_RS11985	PWYG-321	mycolate biosynthesis
CFE88_RS12050	PWY-6654	phosphopantothenate biosynthesis III
CFE88_RS12050	PWY-7862	CFE88_RS12050
CFE88_RS12115	PWY-1622	formaldehyde assimilation I (serine pathway)
CFE88_RS12115	PWY-5484	glycolysis II (from fructose 6-phosphate)
CFE88_RS12180	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CFE88_RS12190	PWY-6683	sulfate reduction III (assimilatory)
CFE88_RS12200	PWY-5194	siroheme biosynthesis
CFE88_RS12200	PWY-5196	factor 430 biosynthesis
CFE88_RS12200	PWY-5441	S-methyl-L-methionine cycle
CFE88_RS12200	PWY-702	L-methionine biosynthesis II
CFE88_RS12200	PWY-7377	cob(II)yrinate <i>a,c</i>-diamide biosynthesis I (early cobalt insertion)
CFE88_RS12620	PWY-5971	palmitate biosynthesis II (bacteria and plants)
CFE88_RS12620	PWY-5973	<i>cis</i>-vaccenate biosynthesis
CFE88_RS12620	PWY-5989	stearate biosynthesis II (bacteria and plants)
CFE88_RS12620	PWY-6113	superpathway of mycolate biosynthesis
CFE88_RS12620	PWY-6282	palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate)
CFE88_RS12620	PWY-6519	8-amino-7-oxononanoate biosynthesis I
CFE88_RS12620	PWY-7663	gondoate biosynthesis (anaerobic)
CFE88_RS12620	PWY-7664	oleate biosynthesis IV (anaerobic)
CFE88_RS12620	PWY-7858	CFE88_RS12620
CFE88_RS12620	PWYG-321	mycolate biosynthesis
