locus-tag	class	description
J4Z28_RS00005	PF00308	Bacterial dnaA  protein
J4Z28_RS00005	PF08299	Bacterial dnaA protein helix-turn-helix
J4Z28_RS00005	PF11638	DnaA N-terminal domain
J4Z28_RS00010	PF00712	DNA polymerase III beta subunit, N-terminal domain
J4Z28_RS00010	PF02767	DNA polymerase III beta subunit, central domain
J4Z28_RS00010	PF02768	DNA polymerase III beta subunit, C-terminal domain
J4Z28_RS00020	PF02463	RecF/RecN/SMC N terminal domain
J4Z28_RS00025	PF00204	DNA gyrase B
J4Z28_RS00025	PF00986	DNA gyrase B subunit, carboxyl terminus
J4Z28_RS00025	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS00025	PF01751	Toprim domain
J4Z28_RS00030	PF03989	DNA gyrase C-terminal domain, beta-propeller
J4Z28_RS00030	PF00521	DNA gyrase/topoisomerase IV, subunit A
J4Z28_RS00035	PF01256	Carbohydrate kinase
J4Z28_RS00040	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
J4Z28_RS00040	PF02403	Seryl-tRNA synthetase N-terminal domain
J4Z28_RS00045	PF03372	Endonuclease/Exonuclease/phosphatase family
J4Z28_RS00060	PF00561	alpha/beta hydrolase fold
J4Z28_RS00070	PF01368	DHH family
J4Z28_RS00070	PF02272	DHHA1 domain
J4Z28_RS00075	PF03948	Ribosomal protein L9, C-terminal domain
J4Z28_RS00075	PF01281	Ribosomal protein L9, N-terminal domain
J4Z28_RS00080	PF00772	DnaB-like helicase N terminal domain
J4Z28_RS00080	PF03796	DnaB-like helicase C terminal domain
J4Z28_RS00085	PF00709	Adenylosuccinate synthetase
J4Z28_RS00100	PF00072	Response regulator receiver domain
J4Z28_RS00100	PF00486	Transcriptional regulatory protein, C terminal
J4Z28_RS00105	PF00989	PAS fold
J4Z28_RS00105	PF00512	His Kinase A (phospho-acceptor) domain
J4Z28_RS00105	PF00672	HAMP domain
J4Z28_RS00105	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS00110	PF07435	YycH protein
J4Z28_RS00120	PF00753	Metallo-beta-lactamase superfamily
J4Z28_RS00125	PF02590	Predicted SPOUT methyltransferase
J4Z28_RS00145	PF13610	DDE domain
J4Z28_RS00155	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS00155	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
J4Z28_RS00165	PF13610	DDE domain
J4Z28_RS00180	PF00696	Amino acid kinase family
J4Z28_RS00185	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
J4Z28_RS00185	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
J4Z28_RS00190	PF00027	Cyclic nucleotide-binding domain
J4Z28_RS00195	PF13520	Amino acid permease
J4Z28_RS00205	PF01316	Arginine repressor, DNA binding domain
J4Z28_RS00205	PF02863	Arginine repressor, C-terminal domain
J4Z28_RS00225	PF00282	Pyridoxal-dependent decarboxylase conserved domain
J4Z28_RS00235	PF04507	Csa1 family
J4Z28_RS00240	PF04055	Radical SAM superfamily
J4Z28_RS00240	PF06463	Molybdenum Cofactor Synthesis C
J4Z28_RS00250	PF00005	ABC transporter
J4Z28_RS00250	PF13732	Domain of unknown function (DUF4162)
J4Z28_RS00265	PF00072	Response regulator receiver domain
J4Z28_RS00265	PF00486	Transcriptional regulatory protein, C terminal
J4Z28_RS00270	PF00512	His Kinase A (phospho-acceptor) domain
J4Z28_RS00270	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS00290	PF07732	Multicopper oxidase
J4Z28_RS00290	PF07731	Multicopper oxidase
J4Z28_RS00295	PF07563	Protein of unknown function (DUF1541)
J4Z28_RS00300	PF16123	Hydroxyacylglutathione hydrolase C-terminus
J4Z28_RS00300	PF00753	Metallo-beta-lactamase superfamily
J4Z28_RS00305	PF13686	DsrE/DsrF/DrsH-like family
J4Z28_RS00310	PF02583	Metal-sensitive transcriptional repressor
J4Z28_RS00315	PF01925	Sulfite exporter TauE/SafE
J4Z28_RS00320	PF01451	Low molecular weight phosphotyrosine protein phosphatase
J4Z28_RS00325	PF02040	Arsenical pump membrane protein
J4Z28_RS00330	PF01022	Bacterial regulatory protein, arsR family
J4Z28_RS00335	PF02374	Anion-transporting ATPase
J4Z28_RS00340	PF06953	Arsenical resistance operon trans-acting repressor ArsD
J4Z28_RS00345	PF01022	Bacterial regulatory protein, arsR family
J4Z28_RS00355	PF04507	Csa1 family
J4Z28_RS00360	PF00924	Mechanosensitive ion channel
J4Z28_RS00365	PF05116	Sucrose-6F-phosphate phosphohydrolase
J4Z28_RS00395	PF01207	Dihydrouridine synthase (Dus)
J4Z28_RS00400	PF06039	Malate:quinone oxidoreductase (Mqo)
J4Z28_RS00415	PF04140	Isoprenylcysteine carboxyl methyltransferase (ICMT) family 
J4Z28_RS00420	PF07690	Major Facilitator Superfamily
J4Z28_RS00425	PF12833	Helix-turn-helix domain
J4Z28_RS00425	PF00072	Response regulator receiver domain
J4Z28_RS00430	PF06580	Histidine kinase
J4Z28_RS00430	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS00455	PF07501	G5 domain
J4Z28_RS00455	PF00746	LPXTG cell wall anchor motif
J4Z28_RS00455	PF17041	E domain
J4Z28_RS00455	PF04650	YSIRK type signal peptide
J4Z28_RS00455	PF17041	E domain
J4Z28_RS00455	PF00746	LPXTG cell wall anchor motif
J4Z28_RS00455	PF04650	YSIRK type signal peptide
J4Z28_RS00455	PF07501	G5 domain
J4Z28_RS00470	PF00202	Aminotransferase class-III
J4Z28_RS00475	PF00155	Aminotransferase class I and II
J4Z28_RS00480	PF03744	6-carboxyhexanoate--CoA ligase
J4Z28_RS00490	PF14731	Staphopain proregion
J4Z28_RS00490	PF05543	Staphopain peptidase C47
J4Z28_RS00495	PF04650	YSIRK type signal peptide
J4Z28_RS00505	PF07683	Cobalamin synthesis protein cobW C-terminal domain
J4Z28_RS00505	PF02492	CobW/HypB/UreG, nucleotide-binding domain
J4Z28_RS00520	PF01297	Zinc-uptake complex component A periplasmic
J4Z28_RS00525	PF02424	ApbE family
J4Z28_RS00530	PF00890	FAD binding domain
J4Z28_RS00530	PF03358	NADPH-dependent FMN reductase
J4Z28_RS00530	PF04205	FMN-binding domain
J4Z28_RS00535	PF07690	Major Facilitator Superfamily
J4Z28_RS00545	PF00005	ABC transporter
J4Z28_RS00545	PF12857	TOBE-like domain
J4Z28_RS00565	PF10100	Staphylopine dehydrogenase
J4Z28_RS00570	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
J4Z28_RS00575	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS00580	PF12911	N-terminal TM domain of oligopeptide transport permease C
J4Z28_RS00580	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS00585	PF00005	ABC transporter
J4Z28_RS00590	PF00005	ABC transporter
J4Z28_RS00595	PF07690	Major Facilitator Superfamily
J4Z28_RS00600	PF02901	Pyruvate formate lyase-like
J4Z28_RS00600	PF01228	Glycine radical
J4Z28_RS00605	PF04055	Radical SAM superfamily
J4Z28_RS00610	PF01546	Peptidase family M20/M25/M40
J4Z28_RS00610	PF07687	Peptidase dimerisation domain
J4Z28_RS00615	PF05525	Branched-chain amino acid transport protein
J4Z28_RS00620	PF17932	Tetracyclin repressor-like, C-terminal domain
J4Z28_RS00620	PF00440	Bacterial regulatory proteins, tetR family
J4Z28_RS00625	PF05853	beta-keto acid cleavage enzyme
J4Z28_RS00630	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
J4Z28_RS00630	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
J4Z28_RS00640	PF00005	ABC transporter
J4Z28_RS00640	PF00571	CBS domain
J4Z28_RS00645	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS00650	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
J4Z28_RS00655	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS00660	PF01476	LysM domain
J4Z28_RS00660	PF00756	Putative esterase
J4Z28_RS00665	PF03606	C4-dicarboxylate anaerobic carrier
J4Z28_RS00670	PF00696	Amino acid kinase family
J4Z28_RS00675	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
J4Z28_RS00675	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
J4Z28_RS00685	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
J4Z28_RS00690	PF03767	HAD superfamily, subfamily IIIB (Acid phosphatase)
J4Z28_RS00695	PF04055	Radical SAM superfamily
J4Z28_RS00695	PF06968	Biotin and Thiamin Synthesis associated domain
J4Z28_RS00700	PF00465	Iron-containing alcohol dehydrogenase 
J4Z28_RS00705	PF02733	Dak1 domain
J4Z28_RS00710	PF02734	DAK2 domain
J4Z28_RS00715	PF03610	PTS system fructose IIA component
J4Z28_RS00730	PF07690	Major Facilitator Superfamily
J4Z28_RS00745	PF00550	Phosphopantetheine attachment site
J4Z28_RS00745	PF00975	Thioesterase domain
J4Z28_RS00745	PF00668	Condensation domain
J4Z28_RS00745	PF13193	AMP-binding enzyme C-terminal domain
J4Z28_RS00745	PF00501	AMP-binding enzyme
J4Z28_RS00755	PF04650	YSIRK type signal peptide
J4Z28_RS00760	PF00083	Sugar (and other) transporter
J4Z28_RS00775	PF00892	EamA-like transporter family
J4Z28_RS00780	PF09084	NMT1/THI5 like
J4Z28_RS00785	PF00939	Sodium:sulfate symporter transmembrane region
J4Z28_RS00790	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
J4Z28_RS00790	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS00795	PF00676	Dehydrogenase E1 component
J4Z28_RS00800	PF02780	Transketolase, C-terminal domain
J4Z28_RS00800	PF02779	Transketolase, pyrimidine binding domain
J4Z28_RS00805	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
J4Z28_RS00805	PF00364	Biotin-requiring enzyme
J4Z28_RS00805	PF02817	e3 binding domain
J4Z28_RS00820	PF02028	BCCT, betaine/carnitine/choline family transporter
J4Z28_RS00830	PF01470	Pyroglutamyl peptidase
J4Z28_RS00835	PF17773	UPF0176 acylphosphatase like domain
J4Z28_RS00835	PF00581	Rhodanese-like domain
J4Z28_RS00835	PF12368	Rhodanase C-terminal
J4Z28_RS00840	PF08450	SMP-30/Gluconolactonase/LRE-like region
J4Z28_RS00845	PF04264	YceI-like domain
J4Z28_RS00850	PF06039	Malate:quinone oxidoreductase (Mqo)
J4Z28_RS00860	PF11208	Protein of unknown function (DUF2992)
J4Z28_RS00875	PF13393	Histidyl-tRNA synthetase
J4Z28_RS00880	PF01634	ATP phosphoribosyltransferase
J4Z28_RS00885	PF00815	Histidinol dehydrogenase
J4Z28_RS00890	PF00475	Imidazoleglycerol-phosphate dehydratase
J4Z28_RS00895	PF00117	Glutamine amidotransferase class-I
J4Z28_RS00900	PF00977	Histidine biosynthesis protein
J4Z28_RS00905	PF00977	Histidine biosynthesis protein
J4Z28_RS00910	PF01502	Phosphoribosyl-AMP cyclohydrolase
J4Z28_RS00910	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
J4Z28_RS00915	PF00797	N-acetyltransferase
J4Z28_RS00920	PF04650	YSIRK type signal peptide
J4Z28_RS00935	PF07690	Major Facilitator Superfamily
J4Z28_RS00940	PF00149	Calcineurin-like phosphoesterase
J4Z28_RS00940	PF02872	5'-nucleotidase, C-terminal domain
J4Z28_RS00955	PF00005	ABC transporter
J4Z28_RS00960	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS00965	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS00980	PF00344	SecY translocase
J4Z28_RS00985	PF16993	Accessory Sec system protein Asp1
J4Z28_RS00990	PF16929	Accessory Sec system GspB-transporter
J4Z28_RS01000	PF07516	SecA Wing and Scaffold domain
J4Z28_RS01000	PF01043	SecA preprotein cross-linking domain
J4Z28_RS01000	PF07517	SecA DEAD-like domain
J4Z28_RS01005	PF00534	Glycosyl transferases group 1
J4Z28_RS01020	PF01641	SelR domain
J4Z28_RS01020	PF01625	Peptide methionine sulfoxide reductase
J4Z28_RS01030	PF07690	Major Facilitator Superfamily
J4Z28_RS01035	PF01613	Flavin reductase like domain
J4Z28_RS01050	PF02566	OsmC-like protein
J4Z28_RS01055	PF01468	GA module
J4Z28_RS01060	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
J4Z28_RS01060	PF05257	CHAP domain
J4Z28_RS01065	PF01061	ABC-2 type transporter
J4Z28_RS01070	PF01238	Phosphomannose isomerase type I
J4Z28_RS01075	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
J4Z28_RS01075	PF02378	Phosphotransferase system, EIIC 
J4Z28_RS01075	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
J4Z28_RS01080	PF05043	Mga helix-turn-helix domain
J4Z28_RS01080	PF08279	HTH domain
J4Z28_RS01080	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
J4Z28_RS01080	PF00874	PRD domain
J4Z28_RS01105	PF07687	Peptidase dimerisation domain
J4Z28_RS01105	PF01546	Peptidase family M20/M25/M40
J4Z28_RS01110	PF02868	Thermolysin metallopeptidase, alpha-helical domain
J4Z28_RS01110	PF01447	Thermolysin metallopeptidase, catalytic domain
J4Z28_RS01110	PF03413	Peptidase propeptide and YPEB domain
J4Z28_RS01110	PF07504	Fungalysin/Thermolysin Propeptide Motif
J4Z28_RS01115	PF02863	Arginine repressor, C-terminal domain
J4Z28_RS01115	PF01316	Arginine repressor, DNA binding domain
J4Z28_RS01125	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
J4Z28_RS01125	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
J4Z28_RS01130	PF13520	Amino acid permease
J4Z28_RS01135	PF13545	Crp-like helix-turn-helix domain
J4Z28_RS01135	PF00027	Cyclic nucleotide-binding domain
J4Z28_RS01145	PF09587	Bacterial capsule synthesis protein PGA_cap
J4Z28_RS01150	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
J4Z28_RS01150	PF00205	Thiamine pyrophosphate enzyme, central domain
J4Z28_RS01150	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
J4Z28_RS01160	PF01797	Transposase IS200 like
J4Z28_RS01180	PF05908	Poly-gamma-glutamate hydrolase
J4Z28_RS01195	PF13460	NAD(P)H-binding 
J4Z28_RS01195	PF11066	Protein of unknown function (DUF2867)
J4Z28_RS01200	PF00245	Alkaline phosphatase
J4Z28_RS01210	PF00486	Transcriptional regulatory protein, C terminal
J4Z28_RS01210	PF00072	Response regulator receiver domain
J4Z28_RS01215	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS01220	PF00005	ABC transporter
J4Z28_RS01235	PF00474	Sodium:solute symporter family
J4Z28_RS01260	PF01047	MarR family
J4Z28_RS01265	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
J4Z28_RS01265	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS01270	PF00255	Glutathione peroxidase
J4Z28_RS01275	PF01507	Phosphoadenosine phosphosulfate reductase family
J4Z28_RS01280	PF00258	Flavodoxin
J4Z28_RS01280	PF00667	FAD binding domain
J4Z28_RS01280	PF00175	Oxidoreductase NAD-binding domain 
J4Z28_RS01285	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
J4Z28_RS01285	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
J4Z28_RS01290	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
J4Z28_RS01295	PF14824	Sirohaem biosynthesis protein central
J4Z28_RS01300	PF01925	Sulfite exporter TauE/SafE
J4Z28_RS01305	PF01747	ATP-sulfurylase
J4Z28_RS01305	PF14306	PUA-like domain
J4Z28_RS01320	PF03477	ATP cone domain
J4Z28_RS01320	PF13597	Anaerobic ribonucleoside-triphosphate reductase
J4Z28_RS01330	PF03605	Anaerobic c4-dicarboxylate membrane transporter
J4Z28_RS01335	PF02028	BCCT, betaine/carnitine/choline family transporter
J4Z28_RS01345	PF00171	Aldehyde dehydrogenase family
J4Z28_RS01350	PF00732	GMC oxidoreductase
J4Z28_RS01350	PF05199	GMC oxidoreductase
J4Z28_RS01355	PF07687	Peptidase dimerisation domain
J4Z28_RS01355	PF01546	Peptidase family M20/M25/M40
J4Z28_RS01370	PF13193	AMP-binding enzyme C-terminal domain
J4Z28_RS01370	PF00501	AMP-binding enzyme
J4Z28_RS01375	PF00391	PEP-utilising enzyme, mobile domain
J4Z28_RS01375	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
J4Z28_RS01375	PF02896	PEP-utilising enzyme, TIM barrel domain
J4Z28_RS01380	PF03618	Kinase/pyrophosphorylase
J4Z28_RS01385	PF06039	Malate:quinone oxidoreductase (Mqo)
J4Z28_RS01395	PF00274	Fructose-bisphosphate aldolase class-I
J4Z28_RS01400	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
J4Z28_RS01400	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS01425	PF00202	Aminotransferase class-III
J4Z28_RS01430	PF13520	Amino acid permease
J4Z28_RS01435	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
J4Z28_RS01435	PF03466	LysR substrate binding domain
J4Z28_RS01440	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
J4Z28_RS01440	PF00056	lactate/malate dehydrogenase, NAD binding domain
J4Z28_RS01445	PF00205	Thiamine pyrophosphate enzyme, central domain
J4Z28_RS01445	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
J4Z28_RS01445	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
J4Z28_RS01450	PF03306	Alpha-acetolactate decarboxylase
J4Z28_RS01455	PF02558	Ketopantoate reductase PanE/ApbA
J4Z28_RS01455	PF08546	Ketopantoate reductase PanE/ApbA C terminal
J4Z28_RS01460	PF02548	Ketopantoate hydroxymethyltransferase
J4Z28_RS01465	PF02569	Pantoate-beta-alanine ligase
J4Z28_RS01470	PF02261	Aspartate decarboxylase
J4Z28_RS01485	PF02677	Epoxyqueuosine reductase QueH
J4Z28_RS01510	PF01180	Dihydroorotate dehydrogenase
J4Z28_RS01515	PF03881	Fructosamine kinase
J4Z28_RS01520	PF00324	Amino acid permease
J4Z28_RS01530	PF03976	Polyphosphate kinase 2 (PPK2)
J4Z28_RS01535	PF06737	Transglycosylase-like domain
J4Z28_RS01540	PF01757	Acyltransferase family
J4Z28_RS01545	PF05257	CHAP domain
J4Z28_RS01550	PF00155	Aminotransferase class I and II
J4Z28_RS01555	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
J4Z28_RS01555	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
J4Z28_RS01560	PF00403	Heavy-metal-associated domain
J4Z28_RS01565	PF00403	Heavy-metal-associated domain
J4Z28_RS01580	PF00171	Aldehyde dehydrogenase family
J4Z28_RS01590	PF02421	Ferrous iron transport protein B
J4Z28_RS01590	PF07670	Nucleoside recognition
J4Z28_RS01590	PF07664	Ferrous iron transport protein B C terminus
J4Z28_RS01590	PF17910	FeoB cytosolic helical domain
J4Z28_RS01605	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
J4Z28_RS01605	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
J4Z28_RS01610	PF01154	Hydroxymethylglutaryl-coenzyme A synthase N terminal
J4Z28_RS01610	PF08540	Hydroxymethylglutaryl-coenzyme A synthase C terminal
J4Z28_RS01615	PF00368	Hydroxymethylglutaryl-coenzyme A reductase
J4Z28_RS01630	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
J4Z28_RS01630	PF03466	LysR substrate binding domain
J4Z28_RS01635	PF03788	LrgA family
J4Z28_RS01640	PF04172	LrgB-like family 
J4Z28_RS01645	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
J4Z28_RS01645	PF00205	Thiamine pyrophosphate enzyme, central domain
J4Z28_RS01645	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
J4Z28_RS01650	PF00367	phosphotransferase system, EIIB
J4Z28_RS01650	PF02378	Phosphotransferase system, EIIC 
J4Z28_RS01650	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
J4Z28_RS01660	PF08240	Alcohol dehydrogenase GroES-like domain
J4Z28_RS01660	PF13823	Alcohol dehydrogenase GroES-associated
J4Z28_RS01660	PF00107	Zinc-binding dehydrogenase
J4Z28_RS01670	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
J4Z28_RS01670	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J4Z28_RS01675	PF07859	alpha/beta hydrolase fold
J4Z28_RS01685	PF08245	Mur ligase middle domain
J4Z28_RS01690	PF14102	Capsule biosynthesis CapC
J4Z28_RS01695	PF09587	Bacterial capsule synthesis protein PGA_cap
J4Z28_RS01710	PF06800	Sugar transport protein
J4Z28_RS01715	PF05025	RbsD / FucU transport protein family
J4Z28_RS01720	PF00294	pfkB family carbohydrate kinase
J4Z28_RS01725	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
J4Z28_RS01725	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
J4Z28_RS01740	PF03315	Serine dehydratase beta chain
J4Z28_RS01740	PF01842	ACT domain
J4Z28_RS01745	PF03313	Serine dehydratase alpha chain
J4Z28_RS01765	PF04203	Sortase domain
J4Z28_RS01775	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
J4Z28_RS01775	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
J4Z28_RS01780	PF00881	Nitroreductase family
J4Z28_RS01785	PF00171	Aldehyde dehydrogenase family
J4Z28_RS01795	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
J4Z28_RS01810	PF00171	Aldehyde dehydrogenase family
J4Z28_RS01825	PF06874	Firmicute fructose-1,6-bisphosphatase
J4Z28_RS01830	PF09335	SNARE associated Golgi protein
J4Z28_RS01835	PF00899	ThiF family
J4Z28_RS01840	PF05690	Thiazole biosynthesis protein ThiG
J4Z28_RS01850	PF01266	FAD dependent oxidoreductase
J4Z28_RS01860	PF07690	Major Facilitator Superfamily
J4Z28_RS01875	PF09954	Uncharacterized protein conserved in bacteria (DUF2188)
J4Z28_RS01880	PF04607	Region found in RelA / SpoT proteins
J4Z28_RS01890	PF00561	alpha/beta hydrolase fold
J4Z28_RS01895	PF13411	MerR HTH family regulatory protein
J4Z28_RS01900	PF07690	Major Facilitator Superfamily
J4Z28_RS01905	PF00392	Bacterial regulatory proteins, gntR family
J4Z28_RS01905	PF07729	FCD domain
J4Z28_RS01910	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
J4Z28_RS01910	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
J4Z28_RS01915	PF02447	GntP family permease
J4Z28_RS01920	PF00483	Nucleotidyl transferase
J4Z28_RS01925	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
J4Z28_RS01925	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
J4Z28_RS01925	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
J4Z28_RS01925	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
J4Z28_RS01930	PF09318	Glycosyl transferase 1 domain A
J4Z28_RS01930	PF00534	Glycosyl transferases group 1
J4Z28_RS01935	PF00293	NUDIX domain
J4Z28_RS01955	PF00106	short chain dehydrogenase
J4Z28_RS01960	PF01546	Peptidase family M20/M25/M40
J4Z28_RS01960	PF07687	Peptidase dimerisation domain
J4Z28_RS01965	PF02503	Polyphosphate kinase middle domain
J4Z28_RS01965	PF13090	Polyphosphate kinase C-terminal domain 2
J4Z28_RS01965	PF17941	Polyphosphate kinase C-terminal domain 1
J4Z28_RS01965	PF13089	Polyphosphate kinase N-terminal domain
J4Z28_RS01970	PF02541	Ppx/GppA phosphatase family
J4Z28_RS01985	PF05343	M42 glutamyl aminopeptidase
J4Z28_RS01995	PF01645	Conserved region in glutamate synthase
J4Z28_RS02010	PF00005	ABC transporter
J4Z28_RS02015	PF03649	Uncharacterised protein family (UPF0014)
J4Z28_RS02020	PF07690	Major Facilitator Superfamily
J4Z28_RS02025	PF00135	Carboxylesterase family
J4Z28_RS02030	PF13520	Amino acid permease
J4Z28_RS02040	PF00107	Zinc-binding dehydrogenase
J4Z28_RS02040	PF08240	Alcohol dehydrogenase GroES-like domain
J4Z28_RS02045	PF00571	CBS domain
J4Z28_RS02045	PF00005	ABC transporter
J4Z28_RS02050	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS02055	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
J4Z28_RS02060	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS02065	PF04172	LrgB-like family 
J4Z28_RS02070	PF03788	LrgA family
J4Z28_RS02075	PF04397	LytTr DNA-binding domain
J4Z28_RS02075	PF00072	Response regulator receiver domain
J4Z28_RS02080	PF07694	5TMR of 5TMR-LYT
J4Z28_RS02080	PF13492	GAF domain
J4Z28_RS02080	PF06580	Histidine kinase
J4Z28_RS02080	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS02085	PF07690	Major Facilitator Superfamily
J4Z28_RS02090	PF02558	Ketopantoate reductase PanE/ApbA
J4Z28_RS02090	PF08546	Ketopantoate reductase PanE/ApbA C terminal
J4Z28_RS02095	PF02096	60Kd inner membrane protein
J4Z28_RS02100	PF00144	Beta-lactamase
J4Z28_RS02105	PF13520	Amino acid permease
J4Z28_RS02110	PF00324	Amino acid permease
J4Z28_RS02125	PF07690	Major Facilitator Superfamily
J4Z28_RS02135	PF02595	Glycerate kinase family
J4Z28_RS02150	PF01545	Cation efflux family
J4Z28_RS02150	PF16916	Dimerisation domain of Zinc Transporter
J4Z28_RS02155	PF00300	Histidine phosphatase superfamily (branch 1)
J4Z28_RS02165	PF00497	Bacterial extracellular solute-binding proteins, family 3
J4Z28_RS02170	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS02175	PF00005	ABC transporter
J4Z28_RS02185	PF02388	FemAB family
J4Z28_RS02205	PF01226	Formate/nitrite transporter
J4Z28_RS02210	PF00583	Acetyltransferase (GNAT) family
J4Z28_RS02220	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
J4Z28_RS02230	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS02230	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
J4Z28_RS02230	PF18267	Rubredoxin NAD+ reductase C-terminal domain
J4Z28_RS02230	PF04324	BFD-like [2Fe-2S] binding domain
J4Z28_RS02230	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
J4Z28_RS02235	PF00355	Rieske [2Fe-2S] domain
J4Z28_RS02240	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
J4Z28_RS02245	PF00384	Molybdopterin oxidoreductase
J4Z28_RS02245	PF14710	Respiratory nitrate reductase alpha N-terminal
J4Z28_RS02245	PF01568	Molydopterin dinucleotide binding domain
J4Z28_RS02250	PF13247	4Fe-4S dicluster domain
J4Z28_RS02250	PF14711	Respiratory nitrate reductase beta C-terminal
J4Z28_RS02260	PF02665	Nitrate reductase gamma subunit
J4Z28_RS02275	PF00196	Bacterial regulatory proteins, luxR family
J4Z28_RS02275	PF00072	Response regulator receiver domain
J4Z28_RS02280	PF07690	Major Facilitator Superfamily
J4Z28_RS02285	PF01047	MarR family
J4Z28_RS02290	PF00881	Nitroreductase family
J4Z28_RS02300	PF00375	Sodium:dicarboxylate symporter family
J4Z28_RS02310	PF16242	Pyridoxamine 5'-phosphate oxidase like
J4Z28_RS02325	PF00367	phosphotransferase system, EIIB
J4Z28_RS02325	PF02378	Phosphotransferase system, EIIC 
J4Z28_RS02365	PF00107	Zinc-binding dehydrogenase
J4Z28_RS02365	PF08240	Alcohol dehydrogenase GroES-like domain
J4Z28_RS02370	PF00583	Acetyltransferase (GNAT) family
J4Z28_RS02375	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
J4Z28_RS02375	PF00535	Glycosyl transferase family 2
J4Z28_RS02385	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
J4Z28_RS02385	PF00535	Glycosyl transferase family 2
J4Z28_RS02390	PF02652	L-lactate permease
J4Z28_RS02395	PF00534	Glycosyl transferases group 1
J4Z28_RS02395	PF13439	Glycosyltransferase Family 4
J4Z28_RS02400	PF06039	Malate:quinone oxidoreductase (Mqo)
J4Z28_RS02405	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS02405	PF00512	His Kinase A (phospho-acceptor) domain
J4Z28_RS02405	PF00672	HAMP domain
J4Z28_RS02410	PF00072	Response regulator receiver domain
J4Z28_RS02410	PF00486	Transcriptional regulatory protein, C terminal
J4Z28_RS02415	PF02687	FtsX-like permease family
J4Z28_RS02420	PF00005	ABC transporter
J4Z28_RS02430	PF12802	MarR family
J4Z28_RS02435	PF13240	zinc-ribbon domain
J4Z28_RS02440	PF07690	Major Facilitator Superfamily
J4Z28_RS02455	PF07690	Major Facilitator Superfamily
J4Z28_RS02465	PF00934	PE family
J4Z28_RS02465	PF07859	alpha/beta hydrolase fold
J4Z28_RS02480	PF01544	CorA-like Mg2+ transporter protein
J4Z28_RS02485	PF01070	FMN-dependent dehydrogenase
J4Z28_RS02490	PF03616	Sodium/glutamate symporter
J4Z28_RS02510	PF02245	Methylpurine-DNA glycosylase (MPG)
J4Z28_RS02525	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
J4Z28_RS02525	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
J4Z28_RS02530	PF01263	Aldose 1-epimerase
J4Z28_RS02535	PF03473	MOSC domain
J4Z28_RS02540	PF06026	Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
J4Z28_RS02550	PF02517	CPBP intramembrane metalloprotease
J4Z28_RS02555	PF00491	Arginase family
J4Z28_RS02560	PF01546	Peptidase family M20/M25/M40
J4Z28_RS02560	PF07687	Peptidase dimerisation domain
J4Z28_RS02570	PF01613	Flavin reductase like domain
J4Z28_RS02595	PF01380	SIS domain
J4Z28_RS02595	PF01418	Helix-turn-helix domain, rpiR family
J4Z28_RS02600	PF00367	phosphotransferase system, EIIB
J4Z28_RS02600	PF02378	Phosphotransferase system, EIIC 
J4Z28_RS02610	PF13419	Haloacid dehalogenase-like hydrolase
J4Z28_RS02630	PF00324	Amino acid permease
J4Z28_RS02640	PF02378	Phosphotransferase system, EIIC 
J4Z28_RS02640	PF00367	phosphotransferase system, EIIB
J4Z28_RS02645	PF01380	SIS domain
J4Z28_RS02660	PF02517	CPBP intramembrane metalloprotease
J4Z28_RS02665	PF08279	HTH domain
J4Z28_RS02665	PF13280	WYL domain
J4Z28_RS02670	PF00459	Inositol monophosphatase family
J4Z28_RS02675	PF03816	Cell envelope-related transcriptional attenuator domain
J4Z28_RS02685	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
J4Z28_RS02685	PF13457	GW (Gly-Tryp) dipeptide domain
J4Z28_RS02690	PF01494	FAD binding domain
J4Z28_RS02695	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
J4Z28_RS02695	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
J4Z28_RS02700	PF00893	Small Multidrug Resistance protein
J4Z28_RS02705	PF00893	Small Multidrug Resistance protein
J4Z28_RS02710	PF05257	CHAP domain
J4Z28_RS02720	PF02558	Ketopantoate reductase PanE/ApbA
J4Z28_RS02720	PF02317	NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain
J4Z28_RS02725	PF03553	Na+/H+ antiporter family
J4Z28_RS02730	PF05257	CHAP domain
J4Z28_RS02755	PF01774	UreD urease accessory protein
J4Z28_RS02760	PF02492	CobW/HypB/UreG, nucleotide-binding domain
J4Z28_RS02765	PF01730	UreF
J4Z28_RS02770	PF02814	UreE urease accessory protein, N-terminal domain
J4Z28_RS02770	PF05194	UreE urease accessory protein, C-terminal domain
J4Z28_RS02775	PF00449	Urease alpha-subunit, N-terminal domain
J4Z28_RS02775	PF01979	Amidohydrolase family
J4Z28_RS02780	PF00699	Urease beta subunit
J4Z28_RS02785	PF00547	Urease, gamma subunit
J4Z28_RS02795	PF08028	Acyl-CoA dehydrogenase, C-terminal domain
J4Z28_RS02795	PF02770	Acyl-CoA dehydrogenase, middle domain
J4Z28_RS02795	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
J4Z28_RS02800	PF01156	Inosine-uridine preferring nucleoside hydrolase
J4Z28_RS02805	PF02632	BioY family
J4Z28_RS02825	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS02830	PF03459	TOBE domain
J4Z28_RS02830	PF00005	ABC transporter
J4Z28_RS02835	PF00899	ThiF family
J4Z28_RS02840	PF00994	Probable molybdopterin binding domain
J4Z28_RS02845	PF01967	MoaC family
J4Z28_RS02850	PF03454	MoeA C-terminal region (domain IV)
J4Z28_RS02850	PF00994	Probable molybdopterin binding domain
J4Z28_RS02850	PF03453	MoeA N-terminal region (domain I and II)
J4Z28_RS02860	PF02391	MoaE protein
J4Z28_RS02865	PF02597	ThiS family
J4Z28_RS02870	PF12804	MobA-like NTP transferase domain
J4Z28_RS02875	PF06463	Molybdenum Cofactor Synthesis C
J4Z28_RS02875	PF04055	Radical SAM superfamily
J4Z28_RS02880	PF01047	MarR family
J4Z28_RS02900	PF00083	Sugar (and other) transporter
J4Z28_RS02900	PF07690	Major Facilitator Superfamily
J4Z28_RS02905	PF01047	MarR family
J4Z28_RS02920	PF02388	FemAB family
J4Z28_RS02925	PF00873	AcrB/AcrD/AcrF family
J4Z28_RS02950	PF06800	Sugar transport protein
J4Z28_RS02955	PF01131	DNA topoisomerase
J4Z28_RS02955	PF01751	Toprim domain
J4Z28_RS02960	PF00860	Permease family
J4Z28_RS02970	PF00338	Ribosomal protein S10p/S20e
J4Z28_RS02975	PF00297	Ribosomal protein L3
J4Z28_RS02980	PF00573	Ribosomal protein L4/L1 family
J4Z28_RS02985	PF00276	Ribosomal protein L23
J4Z28_RS02990	PF03947	Ribosomal Proteins L2, C-terminal domain
J4Z28_RS02990	PF00181	Ribosomal Proteins L2, RNA binding domain
J4Z28_RS02995	PF00203	Ribosomal protein S19
J4Z28_RS03000	PF00237	Ribosomal protein L22p/L17e
J4Z28_RS03005	PF00189	Ribosomal protein S3, C-terminal domain
J4Z28_RS03005	PF07650	KH domain
J4Z28_RS03010	PF00252	Ribosomal protein L16p/L10e
J4Z28_RS03015	PF00831	Ribosomal L29 protein
J4Z28_RS03020	PF00366	Ribosomal protein S17
J4Z28_RS03025	PF00238	Ribosomal protein L14p/L23e
J4Z28_RS03030	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
J4Z28_RS03030	PF00467	KOW motif
J4Z28_RS03035	PF00281	Ribosomal protein L5
J4Z28_RS03035	PF00673	ribosomal L5P family C-terminus
J4Z28_RS03040	PF00253	Ribosomal protein S14p/S29e
J4Z28_RS03045	PF00410	Ribosomal protein S8
J4Z28_RS03050	PF00347	Ribosomal protein L6
J4Z28_RS03055	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
J4Z28_RS03060	PF03719	Ribosomal protein S5, C-terminal domain
J4Z28_RS03060	PF00333	Ribosomal protein S5, N-terminal domain
J4Z28_RS03065	PF00327	Ribosomal protein L30p/L7e
J4Z28_RS03070	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
J4Z28_RS03075	PF00344	SecY translocase
J4Z28_RS03080	PF05191	Adenylate kinase, active site lid
J4Z28_RS03085	PF01176	Translation initiation factor 1A / IF-1
J4Z28_RS03090	PF00444	Ribosomal protein L36
J4Z28_RS03095	PF00416	Ribosomal protein S13/S18
J4Z28_RS03100	PF00411	Ribosomal protein S11
J4Z28_RS03105	PF01000	RNA polymerase Rpb3/RpoA insert domain
J4Z28_RS03105	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
J4Z28_RS03105	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
J4Z28_RS03110	PF01196	Ribosomal protein L17
J4Z28_RS03115	PF00005	ABC transporter
J4Z28_RS03120	PF00005	ABC transporter
J4Z28_RS03125	PF02361	Cobalt transport protein
J4Z28_RS03130	PF01416	tRNA pseudouridine synthase
J4Z28_RS03135	PF00572	Ribosomal protein L13
J4Z28_RS03140	PF00380	Ribosomal protein S9/S16
J4Z28_RS03145	PF02146	Sir2 family
J4Z28_RS03150	PF00455	DeoR C terminal sensor domain
J4Z28_RS03150	PF08220	DeoR-like helix-turn-helix domain
J4Z28_RS03155	PF02502	Ribose/Galactose Isomerase
J4Z28_RS03160	PF02502	Ribose/Galactose Isomerase
J4Z28_RS03165	PF00294	pfkB family carbohydrate kinase
J4Z28_RS03170	PF01791	DeoC/LacD family aldolase
J4Z28_RS03175	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
J4Z28_RS03180	PF02378	Phosphotransferase system, EIIC 
J4Z28_RS03180	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
J4Z28_RS03185	PF00232	Glycosyl hydrolase family 1
J4Z28_RS03195	PF00296	Luciferase-like monooxygenase
J4Z28_RS03200	PF00107	Zinc-binding dehydrogenase
J4Z28_RS03200	PF16884	N-terminal domain of oxidoreductase
J4Z28_RS03205	PF00107	Zinc-binding dehydrogenase
J4Z28_RS03205	PF08240	Alcohol dehydrogenase GroES-like domain
J4Z28_RS03220	PF03780	Asp23 family, cell envelope-related function
J4Z28_RS03225	PF04183	IucA / IucC family
J4Z28_RS03225	PF06276	Ferric iron reductase FhuF-like transporter
J4Z28_RS03230	PF05977	Transmembrane secretion effector
J4Z28_RS03235	PF04183	IucA / IucC family
J4Z28_RS03235	PF06276	Ferric iron reductase FhuF-like transporter
J4Z28_RS03240	PF01168	Alanine racemase, N-terminal domain
J4Z28_RS03245	PF01497	Periplasmic binding protein
J4Z28_RS03250	PF01032	FecCD transport family
J4Z28_RS03255	PF01032	FecCD transport family
J4Z28_RS03260	PF07670	Nucleoside recognition
J4Z28_RS03265	PF03992	Antibiotic biosynthesis monooxygenase
J4Z28_RS03275	PF04307	LexA-binding, inner membrane-associated putative hydrolase
J4Z28_RS03280	PF01704	UTP--glucose-1-phosphate uridylyltransferase
J4Z28_RS03290	PF07690	Major Facilitator Superfamily
J4Z28_RS03295	PF17080	Multidrug Resistance efflux pump
J4Z28_RS03300	PF07690	Major Facilitator Superfamily
J4Z28_RS03305	PF10609	NUBPL iron-transfer P-loop NTPase
J4Z28_RS03355	PF02457	DisA bacterial checkpoint controller nucleotide-binding
J4Z28_RS03365	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
J4Z28_RS03365	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
J4Z28_RS03365	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
J4Z28_RS03365	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
J4Z28_RS03370	PF01797	Transposase IS200 like
J4Z28_RS03375	PF01380	SIS domain
J4Z28_RS03395	PF01545	Cation efflux family
J4Z28_RS03395	PF16916	Dimerisation domain of Zinc Transporter
J4Z28_RS03400	PF01022	Bacterial regulatory protein, arsR family
J4Z28_RS03405	PF13460	NAD(P)H-binding 
J4Z28_RS03410	PF01238	Phosphomannose isomerase type I
J4Z28_RS03430	PF00210	Ferritin-like domain
J4Z28_RS03435	PF01048	Phosphorylase superfamily
J4Z28_RS03440	PF01791	DeoC/LacD family aldolase
J4Z28_RS03445	PF02885	Glycosyl transferase family, helical bundle domain
J4Z28_RS03445	PF00591	Glycosyl transferase family, a/b domain
J4Z28_RS03445	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
J4Z28_RS03450	PF01676	Metalloenzyme superfamily
J4Z28_RS03460	PF02664	S-Ribosylhomocysteinase (LuxS)
J4Z28_RS03480	PF03630	Fumble 
J4Z28_RS03490	PF05066	HB1, ASXL, restriction endonuclease HTH domain
J4Z28_RS03495	PF00117	Glutamine amidotransferase class-I
J4Z28_RS03495	PF06418	CTP synthase N-terminus
J4Z28_RS03505	PF01116	Fructose-bisphosphate aldolase class-II
J4Z28_RS03510	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
J4Z28_RS03515	PF00171	Aldehyde dehydrogenase family
J4Z28_RS03520	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
J4Z28_RS03520	PF07498	Rho termination factor, N-terminal domain
J4Z28_RS03520	PF07497	Rho termination factor, RNA-binding domain
J4Z28_RS03525	PF01197	Ribosomal protein L31
J4Z28_RS03530	PF00265	Thymidine kinase
J4Z28_RS03535	PF03462	PCRF domain
J4Z28_RS03535	PF00472	RF-1 domain
J4Z28_RS03540	PF05175	Methyltransferase small domain
J4Z28_RS03540	PF17827	PrmC N-terminal domain
J4Z28_RS03545	PF03481	Putative GTP-binding controlling metal-binding
J4Z28_RS03545	PF01300	Telomere recombination
J4Z28_RS03550	PF01451	Low molecular weight phosphotyrosine protein phosphatase
J4Z28_RS03555	PF04260	Protein of unknown function (DUF436) 
J4Z28_RS03560	PF00464	Serine hydroxymethyltransferase
J4Z28_RS03570	PF02350	UDP-N-acetylglucosamine 2-epimerase
J4Z28_RS03580	PF00119	ATP synthase A chain
J4Z28_RS03585	PF00137	ATP synthase subunit C
J4Z28_RS03590	PF00430	ATP synthase B/B' CF(0)
J4Z28_RS03595	PF00213	ATP synthase delta (OSCP) subunit
J4Z28_RS03600	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
J4Z28_RS03600	PF00306	ATP synthase alpha/beta chain, C terminal domain
J4Z28_RS03600	PF02874	ATP synthase alpha/beta family, beta-barrel domain
J4Z28_RS03605	PF00231	ATP synthase
J4Z28_RS03610	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
J4Z28_RS03610	PF02874	ATP synthase alpha/beta family, beta-barrel domain
J4Z28_RS03615	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
J4Z28_RS03615	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
J4Z28_RS03625	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
J4Z28_RS03630	PF07977	FabA-like domain
J4Z28_RS03640	PF00436	Single-strand binding protein family
J4Z28_RS03645	PF06737	Transglycosylase-like domain
J4Z28_RS03650	PF03070	TENA/THI-4/PQQC family
J4Z28_RS03655	PF08543	Phosphomethylpyrimidine kinase
J4Z28_RS03660	PF02110	Hydroxyethylthiazole kinase family
J4Z28_RS03665	PF02581	Thiamine monophosphate synthase
J4Z28_RS03670	PF02096	60Kd inner membrane protein
J4Z28_RS03675	PF01966	HD domain
J4Z28_RS03680	PF13091	PLD-like domain
J4Z28_RS03680	PF13396	Phospholipase_D-nuclease N-terminal
J4Z28_RS03685	PF02583	Metal-sensitive transcriptional repressor
J4Z28_RS03700	PF01098	Cell cycle protein
J4Z28_RS03705	PF01820	D-ala D-ala ligase N-terminus
J4Z28_RS03705	PF07478	D-ala D-ala ligase C-terminus
J4Z28_RS03710	PF01225	Mur ligase family, catalytic domain
J4Z28_RS03710	PF02875	Mur ligase family, glutamate ligase domain
J4Z28_RS03710	PF08245	Mur ligase middle domain
J4Z28_RS03715	PF00270	DEAD/DEAH box helicase
J4Z28_RS03715	PF00271	Helicase conserved C-terminal domain
J4Z28_RS03725	PF03703	Bacterial PH domain
J4Z28_RS03730	PF03703	Bacterial PH domain
J4Z28_RS03735	PF01648	4'-phosphopantetheinyl transferase superfamily
J4Z28_RS03740	PF00842	Alanine racemase, C-terminal domain
J4Z28_RS03740	PF01168	Alanine racemase, N-terminal domain
J4Z28_RS03750	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
J4Z28_RS03755	PF08673	Phosphoserine phosphatase RsbU, N-terminal domain
J4Z28_RS03755	PF07228	Stage II sporulation protein E (SpoIIE)
J4Z28_RS03760	PF01740	STAS domain
J4Z28_RS03765	PF13581	Histidine kinase-like ATPase domain
J4Z28_RS03770	PF04542	Sigma-70 region 2 
J4Z28_RS03770	PF04539	Sigma-70 region 3
J4Z28_RS03770	PF04545	Sigma-70, region 4
J4Z28_RS03775	PF16921	Tex protein YqgF-like domain
J4Z28_RS03775	PF17674	HHH domain
J4Z28_RS03775	PF09371	Tex-like protein N-terminal domain
J4Z28_RS03775	PF00575	S1 RNA binding domain
J4Z28_RS03780	PF10263	SprT-like family
J4Z28_RS03810	PF00291	Pyridoxal-phosphate dependent enzyme
J4Z28_RS03810	PF00585	C-terminal regulatory domain of Threonine dehydratase
J4Z28_RS03815	PF00694	Aconitase C-terminal domain
J4Z28_RS03820	PF00330	Aconitase family (aconitate hydratase)
J4Z28_RS03825	PF00180	Isocitrate/isopropylmalate dehydrogenase
J4Z28_RS03830	PF00682	HMGL-like
J4Z28_RS03830	PF08502	LeuA allosteric (dimerisation) domain
J4Z28_RS03835	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
J4Z28_RS03835	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
J4Z28_RS03845	PF00205	Thiamine pyrophosphate enzyme, central domain
J4Z28_RS03845	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
J4Z28_RS03845	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
J4Z28_RS03850	PF00920	Dehydratase family
J4Z28_RS03855	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
J4Z28_RS03860	PF00814	Glycoprotease family
J4Z28_RS03865	PF00583	Acetyltransferase (GNAT) family
J4Z28_RS03870	PF00814	Glycoprotease family
J4Z28_RS03875	PF05192	MutS domain III
J4Z28_RS03875	PF01624	MutS domain I
J4Z28_RS03875	PF05188	MutS domain II
J4Z28_RS03875	PF00488	MutS domain V
J4Z28_RS03875	PF05190	MutS family domain IV
J4Z28_RS03880	PF00005	ABC transporter
J4Z28_RS03880	PF16326	ABC transporter C-terminal domain
J4Z28_RS03880	PF12848	ABC transporter
J4Z28_RS03885	PF02629	CoA binding domain
J4Z28_RS03885	PF06971	Putative DNA-binding protein N-terminus
J4Z28_RS03895	PF04143	Sulphur transport
J4Z28_RS03900	PF01206	Sulfurtransferase TusA
J4Z28_RS03905	PF00909	Ammonium Transporter Family
J4Z28_RS03910	PF13407	Periplasmic binding protein domain
J4Z28_RS03910	PF00356	Bacterial regulatory proteins, lacI family
J4Z28_RS03915	PF08244	Glycosyl hydrolases family 32 C terminal
J4Z28_RS03915	PF00251	Glycosyl hydrolases family 32 N-terminal domain
J4Z28_RS03920	PF00294	pfkB family carbohydrate kinase
J4Z28_RS03925	PF04397	LytTr DNA-binding domain
J4Z28_RS03925	PF00072	Response regulator receiver domain
J4Z28_RS03930	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS03930	PF00989	PAS fold
J4Z28_RS03930	PF17203	Single cache domain 3
J4Z28_RS03930	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
J4Z28_RS03940	PF04647	Accessory gene regulator B
J4Z28_RS03945	PF05372	Delta lysin family
J4Z28_RS03950	PF00795	Carbon-nitrogen hydrolase
J4Z28_RS03965	PF02517	CPBP intramembrane metalloprotease
J4Z28_RS03970	PF00166	Chaperonin 10 Kd subunit
J4Z28_RS03975	PF00118	TCP-1/cpn60 chaperonin family
J4Z28_RS03980	PF14659	Phage integrase, N-terminal SAM-like domain
J4Z28_RS03980	PF00589	Phage integrase family
J4Z28_RS04095	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
J4Z28_RS04095	PF03466	LysR substrate binding domain
J4Z28_RS04130	PF00392	Bacterial regulatory proteins, gntR family
J4Z28_RS04135	PF00005	ABC transporter
J4Z28_RS04145	PF00005	ABC transporter
J4Z28_RS04190	PF10282	Lactonase, 7-bladed beta-propeller
J4Z28_RS04195	PF00171	Aldehyde dehydrogenase family
J4Z28_RS04200	PF01368	DHH family
J4Z28_RS04200	PF02833	DHHA2 domain
J4Z28_RS04205	PF00857	Isochorismatase family
J4Z28_RS04215	PF01842	ACT domain
J4Z28_RS04215	PF00800	Prephenate dehydratase
J4Z28_RS04220	PF02898	Nitric oxide synthase, oxygenase domain
J4Z28_RS04225	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
J4Z28_RS04225	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
J4Z28_RS04225	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
J4Z28_RS04230	PF02540	NAD synthase
J4Z28_RS04235	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
J4Z28_RS04240	PF14044	NETI protein
J4Z28_RS04245	PF10397	Adenylosuccinate lyase C-terminus
J4Z28_RS04245	PF00206	Lyase
J4Z28_RS04250	PF01371	Trp repressor protein
J4Z28_RS04255	PF01884	PcrB family
J4Z28_RS04260	PF13361	UvrD-like helicase C-terminal domain
J4Z28_RS04260	PF00580	UvrD/REP helicase N-terminal domain
J4Z28_RS04265	PF03120	NAD-dependent DNA ligase OB-fold domain
J4Z28_RS04265	PF12826	Helix-hairpin-helix motif
J4Z28_RS04265	PF01653	NAD-dependent DNA ligase adenylation domain
J4Z28_RS04265	PF00533	BRCA1 C Terminus (BRCT) domain
J4Z28_RS04265	PF03119	NAD-dependent DNA ligase C4 zinc finger domain
J4Z28_RS04270	PF07537	CamS sex pheromone cAM373 precursor
J4Z28_RS04275	PF00474	Sodium:solute symporter family
J4Z28_RS04280	PF02686	Glu-tRNAGln amidotransferase C subunit
J4Z28_RS04285	PF01425	Amidase
J4Z28_RS04290	PF02934	GatB/GatE catalytic domain
J4Z28_RS04290	PF02637	GatB domain
J4Z28_RS04295	PF00781	Diacylglycerol kinase catalytic domain
J4Z28_RS04300	PF05958	tRNA (Uracil-5-)-methyltransferase
J4Z28_RS04310	PF00817	impB/mucB/samB family
J4Z28_RS04310	PF11799	impB/mucB/samB family C-terminal domain
J4Z28_RS04320	PF00210	Ferritin-like domain
J4Z28_RS04325	PF08353	Domain of unknown function (DUF1727)
J4Z28_RS04325	PF08245	Mur ligase middle domain
J4Z28_RS04330	PF07685	CobB/CobQ-like glutamine amidotransferase domain
J4Z28_RS04340	PF06081	Aromatic acid exporter family member 1
J4Z28_RS04345	PF00557	Metallopeptidase family M24
J4Z28_RS04360	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS04360	PF07730	Histidine kinase
J4Z28_RS04365	PF00196	Bacterial regulatory proteins, luxR family
J4Z28_RS04365	PF00072	Response regulator receiver domain
J4Z28_RS04370	PF03631	Virulence factor BrkB
J4Z28_RS04380	PF01451	Low molecular weight phosphotyrosine protein phosphatase
J4Z28_RS04385	PF06569	Protein of unknown function (DUF1128)
J4Z28_RS04390	PF02073	Thermophilic metalloprotease (M29)
J4Z28_RS04395	PF03061	Thioesterase superfamily
J4Z28_RS04400	PF04055	Radical SAM superfamily
J4Z28_RS04400	PF08756	YfkB-like domain
J4Z28_RS04410	PF01965	DJ-1/PfpI family
J4Z28_RS04415	PF00912	Transglycosylase
J4Z28_RS04420	PF02631	RecX family
J4Z28_RS04430	PF00005	ABC transporter
J4Z28_RS04430	PF01476	LysM domain
J4Z28_RS04440	PF04307	LexA-binding, inner membrane-associated putative hydrolase
J4Z28_RS04445	PF00633	Helix-hairpin-helix motif
J4Z28_RS04445	PF14815	NUDIX domain
J4Z28_RS04445	PF00730	HhH-GPD superfamily base excision DNA repair protein
J4Z28_RS04450	PF04167	Protein of unknown function (DUF402)
J4Z28_RS04455	PF00664	ABC transporter transmembrane region
J4Z28_RS04455	PF00005	ABC transporter
J4Z28_RS04460	PF06081	Aromatic acid exporter family member 1
J4Z28_RS04465	PF00202	Aminotransferase class-III
J4Z28_RS04470	PF00578	AhpC/TSA family
J4Z28_RS04475	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
J4Z28_RS04475	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
J4Z28_RS04480	PF01475	Ferric uptake regulator family
J4Z28_RS04650	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS04655	PF00005	ABC transporter
J4Z28_RS04665	PF08331	Domain of unknown function (DUF1730)
J4Z28_RS04670	PF00588	SpoU rRNA Methylase family
J4Z28_RS04675	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
J4Z28_RS04690	PF00206	Lyase
J4Z28_RS04690	PF10415	Fumarase C C-terminus
J4Z28_RS04695	PF00849	RNA pseudouridylate synthase
J4Z28_RS04695	PF01479	S4 domain
J4Z28_RS04700	PF07730	Histidine kinase
J4Z28_RS04700	PF13185	GAF domain
J4Z28_RS04705	PF00072	Response regulator receiver domain
J4Z28_RS04705	PF00196	Bacterial regulatory proteins, luxR family
J4Z28_RS04715	PF04286	Protein of unknown function (DUF445)
J4Z28_RS04720	PF06133	Control of competence regulator ComK, YlbF/YmcA
J4Z28_RS04725	PF00149	Calcineurin-like phosphoesterase
J4Z28_RS04735	PF01966	HD domain
J4Z28_RS04745	PF00639	PPIC-type PPIASE domain
J4Z28_RS04760	PF01230	HIT domain
J4Z28_RS04765	PF00005	ABC transporter
J4Z28_RS04770	PF05975	Bacterial ABC transporter protein EcsB
J4Z28_RS04785	PF01208	Uroporphyrinogen decarboxylase (URO-D)
J4Z28_RS04790	PF00762	Ferrochelatase
J4Z28_RS04795	PF01593	Flavin containing amine oxidoreductase
J4Z28_RS04870	PF00501	AMP-binding enzyme
J4Z28_RS04870	PF13193	AMP-binding enzyme C-terminal domain
J4Z28_RS04880	PF01809	Putative membrane protein insertion efficiency factor
J4Z28_RS04885	PF00293	NUDIX domain
J4Z28_RS04890	PF00326	Prolyl oligopeptidase family
J4Z28_RS04895	PF01293	Phosphoenolpyruvate carboxykinase
J4Z28_RS04900	PF02772	S-adenosylmethionine synthetase, central domain
J4Z28_RS04900	PF02773	S-adenosylmethionine synthetase, C-terminal domain
J4Z28_RS04900	PF00438	S-adenosylmethionine synthetase, N-terminal domain
J4Z28_RS04925	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
J4Z28_RS04930	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
J4Z28_RS04940	PF00923	Transaldolase/Fructose-6-phosphate aldolase
J4Z28_RS04955	PF00196	Bacterial regulatory proteins, luxR family
J4Z28_RS04955	PF04542	Sigma-70 region 2 
J4Z28_RS04965	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
J4Z28_RS04965	PF13457	GW (Gly-Tryp) dipeptide domain
J4Z28_RS04975	PF01872	RibD C-terminal domain
J4Z28_RS04975	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
J4Z28_RS04980	PF00677	Lumazine binding domain
J4Z28_RS04985	PF00925	GTP cyclohydrolase II
J4Z28_RS04985	PF00926	3,4-dihydroxy-2-butanone 4-phosphate synthase
J4Z28_RS04990	PF00885	6,7-dimethyl-8-ribityllumazine synthase
J4Z28_RS04995	PF01619	Proline dehydrogenase
J4Z28_RS05000	PF12146	Serine aminopeptidase, S33
J4Z28_RS05005	PF01047	MarR family
J4Z28_RS05010	PF06962	Putative rRNA methylase
J4Z28_RS05015	PF16199	Radical_SAM C-terminal domain
J4Z28_RS05015	PF04055	Radical SAM superfamily
J4Z28_RS05020	PF07690	Major Facilitator Superfamily
J4Z28_RS05025	PF08264	Anticodon-binding domain of tRNA
J4Z28_RS05025	PF09334	tRNA synthetases class I (M)
J4Z28_RS05025	PF00133	tRNA synthetases class I (I, L, M and V)
J4Z28_RS05025	PF13603	Leucyl-tRNA synthetase, Domain 2
J4Z28_RS05035	PF01468	GA module
J4Z28_RS05035	PF07564	Domain of Unknown Function (DUF1542)
J4Z28_RS05035	PF04650	YSIRK type signal peptide
J4Z28_RS05035	PF01468	GA module
J4Z28_RS05035	PF07564	Domain of Unknown Function (DUF1542)
J4Z28_RS05035	PF04650	YSIRK type signal peptide
J4Z28_RS05045	PF14667	Polysaccharide biosynthesis C-terminal domain
J4Z28_RS05045	PF01943	Polysaccharide biosynthesis protein
J4Z28_RS05050	PF00849	RNA pseudouridylate synthase
J4Z28_RS05050	PF01479	S4 domain
J4Z28_RS05060	PF01546	Peptidase family M20/M25/M40
J4Z28_RS05065	PF01063	Amino-transferase class IV
J4Z28_RS05070	PF01636	Phosphotransferase enzyme family
J4Z28_RS05075	PF02390	Putative methyltransferase 
J4Z28_RS05085	PF05343	M42 glutamyl aminopeptidase
J4Z28_RS05090	PF00085	Thioredoxin
J4Z28_RS05095	PF07285	Protein of unknown function (DUF1444)
J4Z28_RS05100	PF14794	Domain of unknown function (DUF4479)
J4Z28_RS05100	PF01588	Putative tRNA binding domain
J4Z28_RS05105	PF01580	FtsK/SpoIIIE family
J4Z28_RS05105	PF17854	FtsK alpha domain
J4Z28_RS05105	PF09397	Ftsk gamma domain
J4Z28_RS05110	PF08245	Mur ligase middle domain
J4Z28_RS05110	PF01225	Mur ligase family, catalytic domain
J4Z28_RS05110	PF02875	Mur ligase family, glutamate ligase domain
J4Z28_RS05115	PF06103	Bacterial protein of unknown function (DUF948)
J4Z28_RS05125	PF01817	Chorismate mutase type II
J4Z28_RS05125	PF00793	DAHP synthetase I family
J4Z28_RS05130	PF00356	Bacterial regulatory proteins, lacI family
J4Z28_RS05135	PF01268	Formate--tetrahydrofolate ligase
J4Z28_RS05140	PF00912	Transglycosylase
J4Z28_RS05140	PF00905	Penicillin binding protein transpeptidase domain
J4Z28_RS05145	PF01479	S4 domain
J4Z28_RS05145	PF00579	tRNA synthetases class I (W and Y)
J4Z28_RS05150	PF13180	PDZ domain
J4Z28_RS05155	PF01553	Acyltransferase
J4Z28_RS05160	PF00367	phosphotransferase system, EIIB
J4Z28_RS05160	PF02378	Phosphotransferase system, EIIC 
J4Z28_RS05170	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
J4Z28_RS05170	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
J4Z28_RS05170	PF01842	ACT domain
J4Z28_RS05175	PF00266	Aminotransferase class-V
J4Z28_RS05180	PF02566	OsmC-like protein
J4Z28_RS05185	PF03009	Glycerophosphoryl diester phosphodiesterase family
J4Z28_RS05190	PF01479	S4 domain
J4Z28_RS05190	PF00163	Ribosomal protein S4/S9 N-terminal domain
J4Z28_RS05195	PF13185	GAF domain
J4Z28_RS05200	PF06160	Septation ring formation regulator, EzrA 
J4Z28_RS05205	PF00266	Aminotransferase class-V
J4Z28_RS05210	PF02568	Thiamine biosynthesis protein (ThiI)
J4Z28_RS05210	PF02926	THUMP domain
J4Z28_RS05215	PF01925	Sulfite exporter TauE/SafE
J4Z28_RS05220	PF08534	Redoxin
J4Z28_RS05225	PF02384	N-6 DNA Methylase
J4Z28_RS05230	PF00871	Acetokinase family
J4Z28_RS05235	PF00582	Universal stress protein family
J4Z28_RS05240	PF01262	Alanine dehydrogenase/PNT, C-terminal domain
J4Z28_RS05240	PF05222	Alanine dehydrogenase/PNT, N-terminal domain
J4Z28_RS05245	PF01321	Creatinase/Prolidase N-terminal domain
J4Z28_RS05245	PF00557	Metallopeptidase family M24
J4Z28_RS05260	PF00571	CBS domain
J4Z28_RS05260	PF07085	DRTGG domain
J4Z28_RS05260	PF00392	Bacterial regulatory proteins, gntR family
J4Z28_RS05260	PF03061	Thioesterase superfamily
J4Z28_RS05265	PF01368	DHH family
J4Z28_RS05265	PF02272	DHHA1 domain
J4Z28_RS05270	PF07733	Bacterial DNA polymerase III alpha NTPase domain
J4Z28_RS05270	PF14579	Helix-hairpin-helix motif
J4Z28_RS05270	PF02811	PHP domain
J4Z28_RS05270	PF01336	OB-fold nucleic acid binding domain
J4Z28_RS05270	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
J4Z28_RS05275	PF00390	Malic enzyme, N-terminal domain
J4Z28_RS05275	PF03949	Malic enzyme, NAD binding domain
J4Z28_RS05280	PF01039	Carboxyl transferase domain
J4Z28_RS05280	PF17848	Acetyl-coA carboxylase zinc finger domain
J4Z28_RS05285	PF03255	Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit
J4Z28_RS05290	PF00365	Phosphofructokinase
J4Z28_RS05295	PF00391	PEP-utilising enzyme, mobile domain
J4Z28_RS05295	PF00224	Pyruvate kinase, barrel domain
J4Z28_RS05295	PF02887	Pyruvate kinase, alpha/beta domain
J4Z28_RS05300	PF00324	Amino acid permease
J4Z28_RS05305	PF00285	Citrate synthase, C-terminal domain
J4Z28_RS05310	PF00180	Isocitrate/isopropylmalate dehydrogenase
J4Z28_RS05315	PF00486	Transcriptional regulatory protein, C terminal
J4Z28_RS05315	PF00072	Response regulator receiver domain
J4Z28_RS05320	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS05320	PF00512	His Kinase A (phospho-acceptor) domain
J4Z28_RS05320	PF00989	PAS fold
J4Z28_RS05320	PF16736	Single Cache-like 
J4Z28_RS05325	PF01367	5'-3' exonuclease, C-terminal SAM fold
J4Z28_RS05325	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
J4Z28_RS05325	PF00476	DNA polymerase family A
J4Z28_RS05330	PF06827	Zinc finger found in FPG and IleRS
J4Z28_RS05330	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
J4Z28_RS05330	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
J4Z28_RS05335	PF01121	Dephospho-CoA kinase
J4Z28_RS05345	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
J4Z28_RS05345	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
J4Z28_RS05350	PF03477	ATP cone domain
J4Z28_RS05355	PF07261	Replication initiation and membrane attachment
J4Z28_RS05360	PF07319	Primosomal protein DnaI N-terminus
J4Z28_RS05360	PF01695	IstB-like ATP binding protein
J4Z28_RS05365	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
J4Z28_RS05365	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
J4Z28_RS05365	PF03129	Anticodon binding domain
J4Z28_RS05365	PF02824	TGS domain
J4Z28_RS05370	PF00324	Amino acid permease
J4Z28_RS05375	PF05198	Translation initiation factor IF-3, N-terminal domain
J4Z28_RS05375	PF00707	Translation initiation factor IF-3, C-terminal domain
J4Z28_RS05380	PF01632	Ribosomal protein L35
J4Z28_RS05385	PF00453	Ribosomal protein L20
J4Z28_RS05400	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
J4Z28_RS05400	PF05698	Bacterial trigger factor protein (TF) C-terminus
J4Z28_RS05400	PF05697	Bacterial trigger factor protein (TF)
J4Z28_RS05405	PF07724	AAA domain (Cdc48 subfamily)
J4Z28_RS05405	PF10431	C-terminal, D2-small domain, of ClpB protein 
J4Z28_RS05405	PF06689	ClpX C4-type zinc finger
J4Z28_RS05410	PF01926	50S ribosome-binding GTPase
J4Z28_RS05415	PF00745	Glutamyl-tRNAGlu reductase, dimerisation domain
J4Z28_RS05415	PF05201	Glutamyl-tRNAGlu reductase, N-terminal domain
J4Z28_RS05415	PF01488	Shikimate / quinate 5-dehydrogenase
J4Z28_RS05425	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
J4Z28_RS05425	PF03900	Porphobilinogen deaminase, C-terminal domain
J4Z28_RS05430	PF02602	Uroporphyrinogen-III synthase HemD
J4Z28_RS05430	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
J4Z28_RS05435	PF00490	Delta-aminolevulinic acid dehydratase
J4Z28_RS05440	PF00202	Aminotransferase class-III
J4Z28_RS05450	PF03352	Methyladenine glycosylase
J4Z28_RS05455	PF00133	tRNA synthetases class I (I, L, M and V)
J4Z28_RS05455	PF08264	Anticodon-binding domain of tRNA
J4Z28_RS05455	PF10458	Valyl tRNA synthetase tRNA binding arm
J4Z28_RS05460	PF02875	Mur ligase family, glutamate ligase domain
J4Z28_RS05460	PF08245	Mur ligase middle domain
J4Z28_RS05470	PF04002	RadC-like JAB domain
J4Z28_RS05490	PF04085	rod shape-determining protein MreC
J4Z28_RS05500	PF00829	Ribosomal prokaryotic L21 protein
J4Z28_RS05505	PF04327	Cysteine protease Prp
J4Z28_RS05510	PF01016	Ribosomal L27 protein
J4Z28_RS05515	PF01018	GTP1/OBG
J4Z28_RS05515	PF01926	50S ribosome-binding GTPase
J4Z28_RS05515	PF09269	Domain of unknown function (DUF1967)
J4Z28_RS05525	PF07499	RuvA, C-terminal domain
J4Z28_RS05525	PF01330	RuvA N terminal domain
J4Z28_RS05530	PF17864	RuvB AAA lid domain
J4Z28_RS05530	PF05496	Holliday junction DNA helicase RuvB P-loop domain
J4Z28_RS05530	PF05491	RuvB C-terminal winged helix domain
J4Z28_RS05535	PF02547	Queuosine biosynthesis protein
J4Z28_RS05540	PF01702	Queuine tRNA-ribosyltransferase
J4Z28_RS05545	PF02699	Preprotein translocase subunit
J4Z28_RS05550	PF07549	SecD/SecF GG Motif
J4Z28_RS05550	PF02355	Protein export membrane protein
J4Z28_RS05555	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
J4Z28_RS05555	PF01368	DHH family
J4Z28_RS05555	PF02272	DHHA1 domain
J4Z28_RS05555	PF17768	RecJ OB domain
J4Z28_RS05560	PF00156	Phosphoribosyl transferase domain
J4Z28_RS05565	PF13291	ACT domain
J4Z28_RS05565	PF04607	Region found in RelA / SpoT proteins
J4Z28_RS05565	PF02824	TGS domain
J4Z28_RS05570	PF02580	D-Tyr-tRNA(Tyr) deacylase
J4Z28_RS05575	PF01520	N-acetylmuramoyl-L-alanine amidase
J4Z28_RS05575	PF08239	Bacterial SH3 domain
J4Z28_RS05580	PF13393	Histidyl-tRNA synthetase
J4Z28_RS05580	PF03129	Anticodon binding domain
J4Z28_RS05585	PF02938	GAD domain
J4Z28_RS05585	PF00152	tRNA synthetases class II (D, K and N) 
J4Z28_RS05585	PF01336	OB-fold nucleic acid binding domain
J4Z28_RS05595	PF00899	ThiF family
J4Z28_RS05600	PF16193	AAA C-terminal domain
J4Z28_RS05600	PF12002	MgsA AAA+ ATPase C terminal
J4Z28_RS05600	PF05496	Holliday junction DNA helicase RuvB P-loop domain
J4Z28_RS05605	PF02082	Transcriptional regulator
J4Z28_RS05615	PF00296	Luciferase-like monooxygenase
J4Z28_RS05620	PF00266	Aminotransferase class-V
J4Z28_RS05635	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
J4Z28_RS05635	PF14490	Helix-hairpin-helix containing domain
J4Z28_RS05635	PF13538	UvrD-like helicase C-terminal domain
J4Z28_RS05640	PF02272	DHHA1 domain
J4Z28_RS05640	PF01411	tRNA synthetases class II (A)
J4Z28_RS05640	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
J4Z28_RS05645	PF06135	IreB regulatory phosphoprotein
J4Z28_RS05650	PF03652	Holliday junction resolvase
J4Z28_RS05655	PF06949	Protein of unknown function (DUF1292)
J4Z28_RS05665	PF01136	Peptidase family U32
J4Z28_RS05670	PF16325	Peptidase family U32 C-terminal domain
J4Z28_RS05670	PF01136	Peptidase family U32
J4Z28_RS05675	PF00485	Phosphoribulokinase / Uridine kinase family
J4Z28_RS05680	PF01272	Transcription elongation factor, GreA/GreB, C-term
J4Z28_RS05680	PF03449	Transcription elongation factor, N-terminal
J4Z28_RS05685	PF01797	Transposase IS200 like
J4Z28_RS05690	PF02682	Carboxyltransferase domain, subdomain C and D
J4Z28_RS05695	PF02626	Carboxyltransferase domain, subdomain A and B 
J4Z28_RS05700	PF00364	Biotin-requiring enzyme
J4Z28_RS05705	PF02785	Biotin carboxylase C-terminal domain
J4Z28_RS05705	PF00289	Biotin carboxylase, N-terminal domain
J4Z28_RS05705	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
J4Z28_RS05710	PF03746	LamB/YcsF family
J4Z28_RS05715	PF01566	Natural resistance-associated macrophage protein
J4Z28_RS05720	PF01048	Phosphorylase superfamily
J4Z28_RS05730	PF01926	50S ribosome-binding GTPase
J4Z28_RS05735	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
J4Z28_RS05735	PF08501	Shikimate dehydrogenase substrate binding domain
J4Z28_RS05735	PF01488	Shikimate / quinate 5-dehydrogenase
J4Z28_RS05740	PF01985	CRS1 / YhbY (CRM) domain
J4Z28_RS05745	PF01467	Cytidylyltransferase-like
J4Z28_RS05750	PF01966	HD domain
J4Z28_RS05760	PF13649	Methyltransferase domain
J4Z28_RS05770	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
J4Z28_RS05775	PF00753	Metallo-beta-lactamase superfamily
J4Z28_RS05775	PF03772	Competence protein
J4Z28_RS05775	PF13567	Domain of unknown function (DUF4131)
J4Z28_RS05780	PF06144	DNA polymerase III, delta subunit
J4Z28_RS05785	PF01649	Ribosomal protein S20
J4Z28_RS05790	PF03144	Elongation factor Tu domain 2
J4Z28_RS05790	PF00009	Elongation factor Tu GTP binding domain
J4Z28_RS05790	PF06421	GTP-binding protein LepA C-terminus
J4Z28_RS05790	PF00679	Elongation factor G C-terminus
J4Z28_RS05790	PF14492	Elongation Factor G, domain II
J4Z28_RS05795	PF04055	Radical SAM superfamily
J4Z28_RS05795	PF06969	HemN C-terminal domain
J4Z28_RS05800	PF01628	HrcA protein C terminal domain
J4Z28_RS05805	PF01025	GrpE
J4Z28_RS05810	PF00012	Hsp70 protein
J4Z28_RS05815	PF00684	DnaJ central domain
J4Z28_RS05815	PF00226	DnaJ domain
J4Z28_RS05815	PF01556	DnaJ C terminal domain
J4Z28_RS05825	PF04452	RNA methyltransferase
J4Z28_RS05830	PF00919	Uncharacterized protein family UPF0004
J4Z28_RS05830	PF01938	TRAM domain
J4Z28_RS05830	PF04055	Radical SAM superfamily
J4Z28_RS05835	PF01165	Ribosomal protein S21
J4Z28_RS05840	PF01972	Serine dehydrogenase proteinase
J4Z28_RS05840	PF01957	NfeD-like C-terminal, partner-binding
J4Z28_RS05845	PF12127	SigmaW regulon antibacterial
J4Z28_RS05855	PF02562	PhoH-like protein
J4Z28_RS05860	PF02130	Uncharacterized protein family UPF0054
J4Z28_RS05865	PF01219	Prokaryotic diacylglycerol kinase
J4Z28_RS05870	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
J4Z28_RS05875	PF07650	KH domain
J4Z28_RS05875	PF01926	50S ribosome-binding GTPase
J4Z28_RS05880	PF02565	Recombination protein O C terminal
J4Z28_RS05880	PF11967	Recombination protein O N terminal
J4Z28_RS05885	PF03129	Anticodon binding domain
J4Z28_RS05885	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
J4Z28_RS05890	PF00571	CBS domain
J4Z28_RS05890	PF08279	HTH domain
J4Z28_RS05895	PF03618	Kinase/pyrophosphorylase
J4Z28_RS05900	PF13662	Toprim domain
J4Z28_RS05900	PF08275	DNA primase catalytic core, N-terminal domain
J4Z28_RS05900	PF01807	CHC2 zinc finger
J4Z28_RS05900	PF00772	DnaB-like helicase N terminal domain
J4Z28_RS05905	PF04545	Sigma-70, region 4
J4Z28_RS05905	PF04539	Sigma-70 region 3
J4Z28_RS05905	PF04542	Sigma-70 region 2 
J4Z28_RS05905	PF00140	Sigma-70 factor, region 1.2
J4Z28_RS05905	PF03979	Sigma-70 factor, region 1.1
J4Z28_RS05910	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
J4Z28_RS05915	PF01784	NIF3 (NGG1p interacting factor 3)
J4Z28_RS05920	PF00270	DEAD/DEAH box helicase
J4Z28_RS05920	PF00271	Helicase conserved C-terminal domain
J4Z28_RS05925	PF01261	Xylose isomerase-like TIM barrel
J4Z28_RS05930	PF00005	ABC transporter
J4Z28_RS05935	PF00950	ABC 3 transport family
J4Z28_RS05940	PF01475	Ferric uptake regulator family
J4Z28_RS05945	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
J4Z28_RS05945	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
J4Z28_RS05950	PF00905	Penicillin binding protein transpeptidase domain
J4Z28_RS05950	PF03717	Penicillin-binding Protein dimerisation domain
J4Z28_RS05955	PF00471	Ribosomal protein L33
J4Z28_RS05960	PF01812	5-formyltetrahydrofolate cyclo-ligase family
J4Z28_RS05965	PF01694	Rhomboid family
J4Z28_RS05970	PF06014	Bacterial protein of unknown function (DUF910)
J4Z28_RS05975	PF00480	ROK family
J4Z28_RS05980	PF01910	Thiamine-binding protein
J4Z28_RS05985	PF00753	Metallo-beta-lactamase superfamily
J4Z28_RS05990	PF00437	Type II/IV secretion system protein
J4Z28_RS05995	PF00482	Type II secretion system (T2SS), protein F
J4Z28_RS06000	PF07963	Prokaryotic N-terminal methylation motif
J4Z28_RS06020	PF01202	Shikimate kinase
J4Z28_RS06025	PF01571	Aminomethyltransferase folate-binding domain
J4Z28_RS06025	PF08669	Glycine cleavage T-protein C-terminal barrel domain
J4Z28_RS06030	PF02347	Glycine cleavage system P-protein
J4Z28_RS06035	PF02347	Glycine cleavage system P-protein
J4Z28_RS06045	PF00581	Rhodanese-like domain
J4Z28_RS06050	PF03099	Biotin/lipoate A/B protein ligase family
J4Z28_RS06065	PF01321	Creatinase/Prolidase N-terminal domain
J4Z28_RS06065	PF00557	Metallopeptidase family M24
J4Z28_RS06070	PF01132	Elongation factor P (EF-P) OB domain
J4Z28_RS06070	PF08207	Elongation factor P (EF-P) KOW-like domain
J4Z28_RS06070	PF09285	Elongation factor P, C-terminal
J4Z28_RS06075	PF01118	Semialdehyde dehydrogenase, NAD binding domain
J4Z28_RS06075	PF02774	Semialdehyde dehydrogenase, dimerisation domain
J4Z28_RS06080	PF01960	ArgJ family
J4Z28_RS06085	PF00696	Amino acid kinase family
J4Z28_RS06090	PF00202	Aminotransferase class-III
J4Z28_RS06095	PF00364	Biotin-requiring enzyme
J4Z28_RS06100	PF00289	Biotin carboxylase, N-terminal domain
J4Z28_RS06100	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
J4Z28_RS06100	PF02785	Biotin carboxylase C-terminal domain
J4Z28_RS06105	PF03780	Asp23 family, cell envelope-related function
J4Z28_RS06110	PF01029	NusB family
J4Z28_RS06115	PF02601	Exonuclease VII, large subunit
J4Z28_RS06115	PF13742	OB-fold nucleic acid binding domain
J4Z28_RS06120	PF02609	Exonuclease VII small subunit
J4Z28_RS06125	PF00348	Polyprenyl synthetase
J4Z28_RS06130	PF02863	Arginine repressor, C-terminal domain
J4Z28_RS06130	PF01316	Arginine repressor, DNA binding domain
J4Z28_RS06135	PF13476	AAA domain
J4Z28_RS06140	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS06140	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
J4Z28_RS06145	PF00676	Dehydrogenase E1 component
J4Z28_RS06150	PF02780	Transketolase, C-terminal domain
J4Z28_RS06150	PF02779	Transketolase, pyrimidine binding domain
J4Z28_RS06155	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
J4Z28_RS06155	PF00364	Biotin-requiring enzyme
J4Z28_RS06155	PF02817	e3 binding domain
J4Z28_RS06160	PF06491	Disulphide isomerase
J4Z28_RS06165	PF11728	Putative aromatic acid exporter C-terminal domain
J4Z28_RS06165	PF06081	Aromatic acid exporter family member 1
J4Z28_RS06175	PF07687	Peptidase dimerisation domain
J4Z28_RS06175	PF01546	Peptidase family M20/M25/M40
J4Z28_RS06180	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
J4Z28_RS06180	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
J4Z28_RS06185	PF16657	Maltogenic Amylase, C-terminal domain
J4Z28_RS06185	PF00128	Alpha amylase, catalytic domain
J4Z28_RS06195	PF00479	Glucose-6-phosphate dehydrogenase, NAD binding domain
J4Z28_RS06195	PF02781	Glucose-6-phosphate dehydrogenase, C-terminal domain
J4Z28_RS06200	PF12706	Beta-lactamase superfamily domain
J4Z28_RS06205	PF14748	Pyrroline-5-carboxylate reductase dimerisation
J4Z28_RS06205	PF03807	NADP oxidoreductase coenzyme F420-dependent
J4Z28_RS06210	PF00106	short chain dehydrogenase
J4Z28_RS06215	PF00248	Aldo/keto reductase family
J4Z28_RS06220	PF00293	NUDIX domain
J4Z28_RS06225	PF01475	Ferric uptake regulator family
J4Z28_RS06230	PF00589	Phage integrase family
J4Z28_RS06230	PF02899	Phage integrase, N-terminal SAM-like domain
J4Z28_RS06235	PF03745	Domain of unknown function (DUF309)
J4Z28_RS06240	PF02616	Segregation and condensation protein ScpA
J4Z28_RS06245	PF04079	Segregation and condensation complex subunit ScpB
J4Z28_RS06250	PF00849	RNA pseudouridylate synthase
J4Z28_RS06250	PF01479	S4 domain
J4Z28_RS06255	PF00072	Response regulator receiver domain
J4Z28_RS06255	PF00486	Transcriptional regulatory protein, C terminal
J4Z28_RS06260	PF00672	HAMP domain
J4Z28_RS06260	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS06260	PF18698	Histidine kinase sensor domain
J4Z28_RS06260	PF00512	His Kinase A (phospho-acceptor) domain
J4Z28_RS06265	PF12822	ECF transporter, substrate-specific component
J4Z28_RS06280	PF00270	DEAD/DEAH box helicase
J4Z28_RS06280	PF00271	Helicase conserved C-terminal domain
J4Z28_RS06285	PF01476	LysM domain
J4Z28_RS06295	PF00710	Asparaginase, N-terminal
J4Z28_RS06295	PF17763	Glutaminase/Asparaginase C-terminal domain
J4Z28_RS06300	PF02224	Cytidylate kinase
J4Z28_RS06305	PF00575	S1 RNA binding domain
J4Z28_RS06310	PF01926	50S ribosome-binding GTPase
J4Z28_RS06310	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
J4Z28_RS06315	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
J4Z28_RS06315	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
J4Z28_RS06320	PF00216	Bacterial DNA-binding protein
J4Z28_RS06330	PF01209	ubiE/COQ5 methyltransferase family
J4Z28_RS06335	PF00348	Polyprenyl synthetase
J4Z28_RS06340	PF00334	Nucleoside diphosphate kinase
J4Z28_RS06345	PF01264	Chorismate synthase
J4Z28_RS06350	PF01761	3-dehydroquinate synthase
J4Z28_RS06355	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
J4Z28_RS06365	PF08858	IDEAL domain
J4Z28_RS06365	PF08864	UPF0302 domain
J4Z28_RS06370	PF07187	Protein of unknown function (DUF1405)
J4Z28_RS06375	PF04298	Putative neutral zinc metallopeptidase
J4Z28_RS06380	PF03819	MazG nucleotide pyrophosphohydrolase domain
J4Z28_RS06385	PF13439	Glycosyltransferase Family 4
J4Z28_RS06385	PF00534	Glycosyl transferases group 1
J4Z28_RS06390	PF01743	Poly A polymerase head domain
J4Z28_RS06390	PF12627	Probable RNA and SrmB- binding site of polymerase A
J4Z28_RS06390	PF13735	tRNA nucleotidyltransferase domain 2 putative
J4Z28_RS06395	PF08279	HTH domain
J4Z28_RS06395	PF03099	Biotin/lipoate A/B protein ligase family
J4Z28_RS06395	PF02237	Biotin protein ligase C terminal domain
J4Z28_RS06400	PF00929	Exonuclease
J4Z28_RS06400	PF04851	Type III restriction enzyme, res subunit
J4Z28_RS06400	PF13307	Helicase C-terminal domain
J4Z28_RS06405	PF01336	OB-fold nucleic acid binding domain
J4Z28_RS06405	PF00152	tRNA synthetases class II (D, K and N) 
J4Z28_RS06410	PF07261	Replication initiation and membrane attachment
J4Z28_RS06415	PF10576	Iron-sulfur binding domain of endonuclease III
J4Z28_RS06415	PF00633	Helix-hairpin-helix motif
J4Z28_RS06415	PF00730	HhH-GPD superfamily base excision DNA repair protein
J4Z28_RS06425	PF00905	Penicillin binding protein transpeptidase domain
J4Z28_RS06425	PF00912	Transglycosylase
J4Z28_RS06430	PF03838	Recombination protein U
J4Z28_RS06440	PF06908	YspA SLOG family
J4Z28_RS06445	PF05103	DivIVA protein
J4Z28_RS06455	PF02926	THUMP domain
J4Z28_RS06455	PF01170	Putative RNA methylase family UPF0020
J4Z28_RS06465	PF00350	Dynamin family
J4Z28_RS06470	PF01367	5'-3' exonuclease, C-terminal SAM fold
J4Z28_RS06470	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
J4Z28_RS06475	PF07564	Domain of Unknown Function (DUF1542)
J4Z28_RS06475	PF01468	GA module
J4Z28_RS06485	PF02592	Putative vitamin uptake transporter
J4Z28_RS06490	PF10782	Zinc-finger
J4Z28_RS06495	PF08712	Scaffold protein Nfu/NifU N terminal
J4Z28_RS06495	PF13769	Virulence factor
J4Z28_RS06500	PF06491	Disulphide isomerase
J4Z28_RS06510	PF00005	ABC transporter
J4Z28_RS06515	PF00303	Thymidylate synthase
J4Z28_RS06520	PF00186	Dihydrofolate reductase
J4Z28_RS06525	PF02645	Uncharacterised protein, DegV family COG1307
J4Z28_RS06530	PF01625	Peptide methionine sulfoxide reductase
J4Z28_RS06535	PF01641	SelR domain
J4Z28_RS06540	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
J4Z28_RS06545	PF06855	YozE SAM-like fold
J4Z28_RS06550	PF17820	PDZ domain
J4Z28_RS06550	PF03572	Peptidase family S41
J4Z28_RS06550	PF01471	Putative peptidoglycan binding domain
J4Z28_RS06560	PF03033	Glycosyltransferase family 28 N-terminal domain
J4Z28_RS06560	PF04101	Glycosyltransferase family 28 C-terminal domain
J4Z28_RS06565	PF01569	PAP2 superfamily
J4Z28_RS06570	PF00005	ABC transporter
J4Z28_RS06570	PF03459	TOBE domain
J4Z28_RS06570	PF17912	MalK OB fold domain
J4Z28_RS06575	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS06585	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS06595	PF01554	MatE
J4Z28_RS06600	PF00455	DeoR C terminal sensor domain
J4Z28_RS06600	PF08220	DeoR-like helix-turn-helix domain
J4Z28_RS06605	PF00072	Response regulator receiver domain
J4Z28_RS06605	PF00486	Transcriptional regulatory protein, C terminal
J4Z28_RS06610	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS06610	PF00512	His Kinase A (phospho-acceptor) domain
J4Z28_RS06610	PF18719	ArlS sensor domain
J4Z28_RS06615	PF16870	2-oxoglutarate dehydrogenase C-terminal
J4Z28_RS06615	PF02779	Transketolase, pyrimidine binding domain
J4Z28_RS06615	PF00676	Dehydrogenase E1 component
J4Z28_RS06620	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
J4Z28_RS06620	PF00364	Biotin-requiring enzyme
J4Z28_RS06620	PF02817	e3 binding domain
J4Z28_RS06640	PF07728	AAA domain (dynein-related subfamily)
J4Z28_RS06640	PF08406	CbbQ/NirQ/NorQ C-terminal 
J4Z28_RS06645	PF00092	von Willebrand factor type A domain
J4Z28_RS06650	PF05525	Branched-chain amino acid transport protein
J4Z28_RS06655	PF05816	Toxic anion resistance protein (TelA)
J4Z28_RS06675	PF00313	'Cold-shock' DNA-binding domain
J4Z28_RS06690	PF00005	ABC transporter
J4Z28_RS06700	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
J4Z28_RS06700	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
J4Z28_RS06705	PF00842	Alanine racemase, C-terminal domain
J4Z28_RS06705	PF01168	Alanine racemase, N-terminal domain
J4Z28_RS06710	PF07687	Peptidase dimerisation domain
J4Z28_RS06710	PF01546	Peptidase family M20/M25/M40
J4Z28_RS06715	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
J4Z28_RS06715	PF00132	Bacterial transferase hexapeptide (six repeats)
J4Z28_RS06715	PF14602	Hexapeptide repeat of succinyl-transferase
J4Z28_RS06720	PF05173	Dihydrodipicolinate reductase, C-terminus
J4Z28_RS06720	PF01113	Dihydrodipicolinate reductase, N-terminus
J4Z28_RS06725	PF00701	Dihydrodipicolinate synthetase family
J4Z28_RS06730	PF02774	Semialdehyde dehydrogenase, dimerisation domain
J4Z28_RS06730	PF01118	Semialdehyde dehydrogenase, NAD binding domain
J4Z28_RS06735	PF00696	Amino acid kinase family
J4Z28_RS06735	PF13840	ACT domain 
J4Z28_RS06735	PF01842	ACT domain
J4Z28_RS06740	PF00005	ABC transporter
J4Z28_RS06740	PF12848	ABC transporter
J4Z28_RS06745	PF17783	CvfB-like winged helix domain
J4Z28_RS06745	PF13509	S1 domain
J4Z28_RS06750	PF12849	PBP superfamily domain
J4Z28_RS06755	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS06760	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS06765	PF00005	ABC transporter
J4Z28_RS06770	PF01895	PhoU domain
J4Z28_RS06785	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS06790	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS06795	PF00005	ABC transporter
J4Z28_RS06800	PF00005	ABC transporter
J4Z28_RS06810	PF02388	FemAB family
J4Z28_RS06815	PF02388	FemAB family
J4Z28_RS06825	PF00290	Tryptophan synthase alpha chain
J4Z28_RS06830	PF00291	Pyridoxal-phosphate dependent enzyme
J4Z28_RS06835	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
J4Z28_RS06840	PF00218	Indole-3-glycerol phosphate synthase
J4Z28_RS06845	PF00591	Glycosyl transferase family, a/b domain
J4Z28_RS06850	PF02885	Glycosyl transferase family, helical bundle domain
J4Z28_RS06850	PF00591	Glycosyl transferase family, a/b domain
J4Z28_RS06850	PF00117	Glutamine amidotransferase class-I
J4Z28_RS06855	PF04715	Anthranilate synthase component I, N terminal region
J4Z28_RS06855	PF00425	chorismate binding enzyme
J4Z28_RS06860	PF01842	ACT domain
J4Z28_RS06860	PF02153	Prephenate dehydrogenase
J4Z28_RS06865	PF00817	impB/mucB/samB family
J4Z28_RS06865	PF11799	impB/mucB/samB family C-terminal domain
J4Z28_RS06865	PF11798	IMS family HHH motif
J4Z28_RS06870	PF01361	Tautomerase enzyme
J4Z28_RS06875	PF03816	Cell envelope-related transcriptional attenuator domain
J4Z28_RS06880	PF01625	Peptide methionine sulfoxide reductase
J4Z28_RS06885	PF09924	Uncharacterised conserved protein (DUF2156)
J4Z28_RS06885	PF03706	Lysylphosphatidylglycerol synthase TM region
J4Z28_RS06890	PF01594	AI-2E family transporter
J4Z28_RS06895	PF03123	CAT RNA binding domain
J4Z28_RS06895	PF00874	PRD domain
J4Z28_RS06900	PF01235	Sodium:alanine symporter family
J4Z28_RS06905	PF03989	DNA gyrase C-terminal domain, beta-propeller
J4Z28_RS06905	PF00521	DNA gyrase/topoisomerase IV, subunit A
J4Z28_RS06910	PF00204	DNA gyrase B
J4Z28_RS06910	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS06910	PF01751	Toprim domain
J4Z28_RS06910	PF00986	DNA gyrase B subunit, carboxyl terminus
J4Z28_RS06915	PF02660	Glycerol-3-phosphate acyltransferase
J4Z28_RS06925	PF03061	Thioesterase superfamily
J4Z28_RS06930	PF00330	Aconitase family (aconitate hydratase)
J4Z28_RS06930	PF00694	Aconitase C-terminal domain
J4Z28_RS06935	PF02028	BCCT, betaine/carnitine/choline family transporter
J4Z28_RS06940	PF01741	Large-conductance mechanosensitive channel, MscL
J4Z28_RS06945	PF13476	AAA domain
J4Z28_RS06950	PF00149	Calcineurin-like phosphoesterase
J4Z28_RS06950	PF12320	Type 5 capsule protein repressor C-terminal domain
J4Z28_RS06955	PF07301	Protein of unknown function (DUF1453)
J4Z28_RS06965	PF02780	Transketolase, C-terminal domain
J4Z28_RS06965	PF00456	Transketolase, thiamine diphosphate binding domain
J4Z28_RS06965	PF02779	Transketolase, pyrimidine binding domain
J4Z28_RS06970	PF05979	Bacterial protein of unknown function (DUF896)
J4Z28_RS06980	PF01726	LexA DNA binding domain
J4Z28_RS06980	PF00717	Peptidase S24-like
J4Z28_RS06985	PF00188	Cysteine-rich secretory protein family
J4Z28_RS06985	PF14504	CAP-associated N-terminal
J4Z28_RS06990	PF00478	IMP dehydrogenase / GMP reductase domain
J4Z28_RS06995	PF00253	Ribosomal protein S14p/S29e
J4Z28_RS07000	PF00471	Ribosomal protein L33
J4Z28_RS07005	PF00199	Catalase
J4Z28_RS07005	PF06628	Catalase-related immune-responsive
J4Z28_RS07010	PF00324	Amino acid permease
J4Z28_RS07020	PF01797	Transposase IS200 like
J4Z28_RS07030	PF08544	GHMP kinases C terminal 
J4Z28_RS07030	PF00288	GHMP kinases N terminal domain
J4Z28_RS07035	PF00291	Pyridoxal-phosphate dependent enzyme
J4Z28_RS07040	PF01842	ACT domain
J4Z28_RS07040	PF00742	Homoserine dehydrogenase
J4Z28_RS07040	PF03447	Homoserine dehydrogenase, NAD binding domain
J4Z28_RS07045	PF00696	Amino acid kinase family
J4Z28_RS07045	PF13840	ACT domain 
J4Z28_RS07060	PF00565	Staphylococcal nuclease homologue
J4Z28_RS07070	PF00196	Bacterial regulatory proteins, luxR family
J4Z28_RS07070	PF00072	Response regulator receiver domain
J4Z28_RS07075	PF07730	Histidine kinase
J4Z28_RS07085	PF00005	ABC transporter
J4Z28_RS07090	PF13091	PLD-like domain
J4Z28_RS07090	PF13396	Phospholipase_D-nuclease N-terminal
J4Z28_RS07135	PF03951	Glutamine synthetase, beta-Grasp domain
J4Z28_RS07135	PF00120	Glutamine synthetase, catalytic domain
J4Z28_RS07140	PF13411	MerR HTH family regulatory protein
J4Z28_RS07145	PF06838	Methionine gamma-lyase 
J4Z28_RS07150	PF16360	GTP-binding GTPase Middle Region
J4Z28_RS07150	PF13167	GTP-binding GTPase N-terminal
J4Z28_RS07150	PF01926	50S ribosome-binding GTPase
J4Z28_RS07155	PF00255	Glutathione peroxidase
J4Z28_RS07160	PF17209	Hfq protein
J4Z28_RS07170	PF00561	alpha/beta hydrolase fold
J4Z28_RS07175	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
J4Z28_RS07175	PF01266	FAD dependent oxidoreductase
J4Z28_RS07180	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
J4Z28_RS07180	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
J4Z28_RS07185	PF00230	Major intrinsic protein
J4Z28_RS07190	PF04309	Glycerol-3-phosphate responsive antiterminator
J4Z28_RS07195	PF01119	DNA mismatch repair protein, C-terminal domain
J4Z28_RS07195	PF08676	MutL C terminal dimerisation domain
J4Z28_RS07200	PF01624	MutS domain I
J4Z28_RS07200	PF05188	MutS domain II
J4Z28_RS07200	PF05192	MutS domain III
J4Z28_RS07200	PF05190	MutS family domain IV
J4Z28_RS07200	PF00488	MutS domain V
J4Z28_RS07210	PF06133	Control of competence regulator ComK, YlbF/YmcA
J4Z28_RS07215	PF01938	TRAM domain
J4Z28_RS07215	PF00919	Uncharacterized protein family UPF0004
J4Z28_RS07215	PF04055	Radical SAM superfamily
J4Z28_RS07225	PF05908	Poly-gamma-glutamate hydrolase
J4Z28_RS07230	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
J4Z28_RS07235	PF01855	Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
J4Z28_RS07235	PF01558	Pyruvate ferredoxin/flavodoxin oxidoreductase
J4Z28_RS07235	PF17147	Pyruvate:ferredoxin oxidoreductase core domain II
J4Z28_RS07240	PF13277	YmdB-like protein
J4Z28_RS07250	PF01966	HD domain
J4Z28_RS07250	PF00013	KH domain
J4Z28_RS07250	PF12072	Domain of unknown function (DUF3552)
J4Z28_RS07255	PF00154	recA bacterial DNA recombination protein
J4Z28_RS07260	PF02464	Competence-damaged protein
J4Z28_RS07260	PF18146	Damage-inducible protein CinA KH domain
J4Z28_RS07260	PF00994	Probable molybdopterin binding domain
J4Z28_RS07265	PF01066	CDP-alcohol phosphatidyltransferase
J4Z28_RS07275	PF11868	Protein of unknown function (DUF3388)
J4Z28_RS07285	PF00675	Insulinase (Peptidase family M16)
J4Z28_RS07285	PF05193	Peptidase M16 inactive domain
J4Z28_RS07290	PF05193	Peptidase M16 inactive domain
J4Z28_RS07295	PF00392	Bacterial regulatory proteins, gntR family
J4Z28_RS07295	PF07702	UTRA domain
J4Z28_RS07300	PF17854	FtsK alpha domain
J4Z28_RS07300	PF09397	Ftsk gamma domain
J4Z28_RS07300	PF01580	FtsK/SpoIIIE family
J4Z28_RS07305	PF00753	Metallo-beta-lactamase superfamily
J4Z28_RS07305	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
J4Z28_RS07305	PF17770	Ribonuclease J C-terminal domain
J4Z28_RS07310	PF00013	KH domain
J4Z28_RS07310	PF01138	3' exoribonuclease family, domain 1
J4Z28_RS07310	PF03725	3' exoribonuclease family, domain 2
J4Z28_RS07310	PF00575	S1 RNA binding domain
J4Z28_RS07310	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
J4Z28_RS07315	PF00312	Ribosomal protein S15
J4Z28_RS07320	PF06574	FAD synthetase
J4Z28_RS07320	PF01687	Riboflavin kinase
J4Z28_RS07325	PF01509	TruB family pseudouridylate synthase (N terminal domain)
J4Z28_RS07325	PF16198	tRNA pseudouridylate synthase B C-terminal domain
J4Z28_RS07330	PF02033	Ribosome-binding factor A
J4Z28_RS07335	PF04760	Translation initiation factor IF-2, N-terminal region
J4Z28_RS07335	PF00009	Elongation factor Tu GTP binding domain
J4Z28_RS07335	PF11987	Translation-initiation factor 2
J4Z28_RS07340	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
J4Z28_RS07345	PF04296	Protein of unknown function (DUF448)
J4Z28_RS07350	PF13184	NusA-like KH domain
J4Z28_RS07350	PF08529	NusA N-terminal domain
J4Z28_RS07350	PF00575	S1 RNA binding domain
J4Z28_RS07355	PF17384	RimP C-terminal SH3 domain
J4Z28_RS07355	PF02576	RimP N-terminal domain
J4Z28_RS07360	PF14480	DNA polymerase III polC-type N-terminus I
J4Z28_RS07360	PF07733	Bacterial DNA polymerase III alpha NTPase domain
J4Z28_RS07360	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
J4Z28_RS07360	PF14579	Helix-hairpin-helix motif
J4Z28_RS07360	PF02811	PHP domain
J4Z28_RS07360	PF00929	Exonuclease
J4Z28_RS07360	PF11490	DNA polymerase III polC-type N-terminus II
J4Z28_RS07365	PF03129	Anticodon binding domain
J4Z28_RS07365	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
J4Z28_RS07365	PF04073	Aminoacyl-tRNA editing domain
J4Z28_RS07370	PF13180	PDZ domain
J4Z28_RS07370	PF02163	Peptidase family M50
J4Z28_RS07380	PF01255	Putative undecaprenyl diphosphate synthase
J4Z28_RS07385	PF01765	Ribosome recycling factor
J4Z28_RS07390	PF00696	Amino acid kinase family
J4Z28_RS07395	PF00889	Elongation factor TS
J4Z28_RS07400	PF00318	Ribosomal protein S2
J4Z28_RS07405	PF06018	CodY GAF-like domain
J4Z28_RS07405	PF08222	CodY helix-turn-helix domain
J4Z28_RS07410	PF00004	ATPase family associated with various cellular activities (AAA)
J4Z28_RS07410	PF07724	AAA domain (Cdc48 subfamily)
J4Z28_RS07410	PF10431	C-terminal, D2-small domain, of ClpB protein 
J4Z28_RS07415	PF00227	Proteasome subunit
J4Z28_RS07420	PF02899	Phage integrase, N-terminal SAM-like domain
J4Z28_RS07420	PF00589	Phage integrase family
J4Z28_RS07425	PF01134	Glucose inhibited division protein A
J4Z28_RS07430	PF01131	DNA topoisomerase
J4Z28_RS07430	PF01751	Toprim domain
J4Z28_RS07430	PF01396	Topoisomerase DNA binding C4 zinc finger
J4Z28_RS07435	PF02481	DNA recombination-mediator protein A
J4Z28_RS07445	PF02629	CoA binding domain
J4Z28_RS07445	PF00549	CoA-ligase
J4Z28_RS07450	PF08442	ATP-grasp domain
J4Z28_RS07450	PF00549	CoA-ligase
J4Z28_RS07455	PF01351	Ribonuclease HII
J4Z28_RS07460	PF01926	50S ribosome-binding GTPase
J4Z28_RS07470	PF09586	Bacterial membrane protein YfhO
J4Z28_RS07480	PF01245	Ribosomal protein L19
J4Z28_RS07485	PF01746	tRNA (Guanine-1)-methyltransferase
J4Z28_RS07490	PF05239	PRC-barrel domain
J4Z28_RS07490	PF01782	RimM N-terminal domain
J4Z28_RS07495	PF00886	Ribosomal protein S16
J4Z28_RS07500	PF02881	SRP54-type protein, helical bundle domain
J4Z28_RS07500	PF02978	Signal peptide binding domain
J4Z28_RS07500	PF00448	SRP54-type protein, GTPase domain
J4Z28_RS07505	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
J4Z28_RS07510	PF00448	SRP54-type protein, GTPase domain
J4Z28_RS07510	PF02881	SRP54-type protein, helical bundle domain
J4Z28_RS07515	PF06470	SMC proteins Flexible Hinge Domain
J4Z28_RS07515	PF02463	RecF/RecN/SMC N terminal domain
J4Z28_RS07520	PF00035	Double-stranded RNA binding motif
J4Z28_RS07520	PF14622	Ribonuclease-III-like
J4Z28_RS07525	PF00550	Phosphopantetheine attachment site
J4Z28_RS07535	PF00698	Acyl transferase domain
J4Z28_RS07540	PF02504	Fatty acid synthesis protein
J4Z28_RS07550	PF00270	DEAD/DEAH box helicase
J4Z28_RS07550	PF00271	Helicase conserved C-terminal domain
J4Z28_RS07550	PF17191	RecG wedge domain
J4Z28_RS07555	PF13684	Dihydroxyacetone kinase family
J4Z28_RS07555	PF02734	DAK2 domain
J4Z28_RS07560	PF03780	Asp23 family, cell envelope-related function
J4Z28_RS07565	PF00830	Ribosomal L28 family
J4Z28_RS07575	PF00834	Ribulose-phosphate 3 epimerase family
J4Z28_RS07580	PF03193	RsgA GTPase
J4Z28_RS07580	PF16745	RsgA N-terminal domain
J4Z28_RS07585	PF03793	PASTA domain
J4Z28_RS07585	PF00069	Protein kinase domain
J4Z28_RS07595	PF04055	Radical SAM superfamily
J4Z28_RS07600	PF01189	16S rRNA methyltransferase RsmB/F
J4Z28_RS07600	PF01029	NusB family
J4Z28_RS07605	PF02911	Formyl transferase, C-terminal domain
J4Z28_RS07605	PF00551	Formyl transferase
J4Z28_RS07610	PF01327	Polypeptide deformylase
J4Z28_RS07620	PF00271	Helicase conserved C-terminal domain
J4Z28_RS07620	PF17764	3′ DNA-binding domain (3′BD)
J4Z28_RS07620	PF18074	Primosomal protein N C-terminal domain
J4Z28_RS07620	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
J4Z28_RS07620	PF04851	Type III restriction enzyme, res subunit
J4Z28_RS07625	PF02441	Flavoprotein
J4Z28_RS07625	PF04127	DNA / pantothenate metabolism flavoprotein
J4Z28_RS07630	PF01192	RNA polymerase Rpb6 
J4Z28_RS07635	PF00625	Guanylate kinase
J4Z28_RS07640	PF05670	NFACT protein RNA binding domain
J4Z28_RS07655	PF00156	Phosphoribosyl transferase domain
J4Z28_RS07660	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
J4Z28_RS07665	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
J4Z28_RS07665	PF02787	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
J4Z28_RS07665	PF02142	MGS-like domain
J4Z28_RS07670	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
J4Z28_RS07670	PF00117	Glutamine amidotransferase class-I
J4Z28_RS07675	PF01979	Amidohydrolase family
J4Z28_RS07680	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
J4Z28_RS07680	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
J4Z28_RS07685	PF00860	Permease family
J4Z28_RS07690	PF00156	Phosphoribosyl transferase domain
J4Z28_RS07695	PF00849	RNA pseudouridylate synthase
J4Z28_RS07695	PF01479	S4 domain
J4Z28_RS07700	PF01252	Signal peptidase (SPase) II
J4Z28_RS07705	PF05257	CHAP domain
J4Z28_RS07705	PF01476	LysM domain
J4Z28_RS07715	PF00133	tRNA synthetases class I (I, L, M and V)
J4Z28_RS07715	PF08264	Anticodon-binding domain of tRNA
J4Z28_RS07715	PF06827	Zinc finger found in FPG and IleRS
J4Z28_RS07720	PF05103	DivIVA protein
J4Z28_RS07730	PF02325	YGGT family
J4Z28_RS07735	PF04472	Cell division protein SepF
J4Z28_RS07740	PF01168	Alanine racemase, N-terminal domain
J4Z28_RS07745	PF02578	Multi-copper polyphenol oxidoreductase laccase
J4Z28_RS07750	PF12327	FtsZ family, C-terminal domain
J4Z28_RS07750	PF00091	Tubulin/FtsZ family, GTPase domain
J4Z28_RS07755	PF02491	SHS2 domain inserted in FTSA
J4Z28_RS07760	PF03799	Cell division protein FtsQ
J4Z28_RS07760	PF08478	POTRA domain, FtsQ-type
J4Z28_RS07765	PF08245	Mur ligase middle domain
J4Z28_RS07765	PF02875	Mur ligase family, glutamate ligase domain
J4Z28_RS07770	PF00953	Glycosyl transferase family 4
J4Z28_RS07775	PF03793	PASTA domain
J4Z28_RS07775	PF03717	Penicillin-binding Protein dimerisation domain
J4Z28_RS07775	PF00905	Penicillin binding protein transpeptidase domain
J4Z28_RS07780	PF04977	Septum formation initiator
J4Z28_RS07785	PF01795	MraW methylase family
J4Z28_RS07790	PF02381	MraZ protein, putative antitoxin-like
J4Z28_RS07795	PF10079	Bacillithiol biosynthesis BshC 
J4Z28_RS07800	PF13673	Acetyltransferase (GNAT) domain
J4Z28_RS07805	PF13419	Haloacid dehalogenase-like hydrolase
J4Z28_RS07810	PF05480	Staphylococcus haemolytic protein
J4Z28_RS07815	PF05480	Staphylococcus haemolytic protein
J4Z28_RS07840	PF01725	Ham1 family
J4Z28_RS07845	PF01177	Asp/Glu/Hydantoin racemase
J4Z28_RS07850	PF13085	2Fe-2S iron-sulfur cluster binding domain
J4Z28_RS07850	PF13183	4Fe-4S dicluster domain
J4Z28_RS07855	PF00890	FAD binding domain
J4Z28_RS07855	PF02910	Fumarate reductase flavoprotein C-term
J4Z28_RS07860	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
J4Z28_RS07870	PF01541	GIY-YIG catalytic domain
J4Z28_RS07870	PF02151	UvrB/uvrC motif
J4Z28_RS07870	PF08459	UvrC Helix-hairpin-helix N-terminal
J4Z28_RS07875	PF00085	Thioredoxin
J4Z28_RS07880	PF01713	Smr domain
J4Z28_RS07880	PF00488	MutS domain V
J4Z28_RS07885	PF14791	DNA polymerase beta thumb 
J4Z28_RS07885	PF14716	Helix-hairpin-helix domain
J4Z28_RS07885	PF02811	PHP domain
J4Z28_RS07895	PF05164	Cell division protein ZapA
J4Z28_RS07900	PF11858	Domain of unknown function (DUF3378)
J4Z28_RS07900	PF01351	Ribonuclease HII
J4Z28_RS07905	PF03483	B3/4 domain
J4Z28_RS07905	PF03484	tRNA synthetase B5 domain
J4Z28_RS07905	PF03147	Ferredoxin-fold anticodon binding domain
J4Z28_RS07905	PF01588	Putative tRNA binding domain
J4Z28_RS07905	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
J4Z28_RS07910	PF02912	Aminoacyl tRNA synthetase class II, N-terminal domain
J4Z28_RS07910	PF01409	tRNA synthetases class II core domain (F)
J4Z28_RS07915	PF00588	SpoU rRNA Methylase family
J4Z28_RS07915	PF08032	RNA 2'-O ribose methyltransferase substrate binding
J4Z28_RS07920	PF07501	G5 domain
J4Z28_RS07920	PF17041	E domain
J4Z28_RS07920	PF00746	LPXTG cell wall anchor motif
J4Z28_RS07920	PF04650	YSIRK type signal peptide
J4Z28_RS07925	PF01783	Ribosomal L32p protein family
J4Z28_RS07935	PF05636	HIGH Nucleotidyl Transferase
J4Z28_RS07940	PF01467	Cytidylyltransferase-like
J4Z28_RS07955	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
J4Z28_RS07960	PF03009	Glycerophosphoryl diester phosphodiesterase family
J4Z28_RS07965	PF06133	Control of competence regulator ComK, YlbF/YmcA
J4Z28_RS07970	PF00188	Cysteine-rich secretory protein family
J4Z28_RS07970	PF14504	CAP-associated N-terminal
J4Z28_RS07980	PF01040	UbiA prenyltransferase family
J4Z28_RS07985	PF02628	Cytochrome oxidase assembly protein
J4Z28_RS07990	PF00364	Biotin-requiring enzyme
J4Z28_RS07990	PF02785	Biotin carboxylase C-terminal domain
J4Z28_RS07990	PF00289	Biotin carboxylase, N-terminal domain
J4Z28_RS07990	PF02436	Conserved carboxylase domain
J4Z28_RS07990	PF00682	HMGL-like
J4Z28_RS07990	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
J4Z28_RS07995	PF01098	Cell cycle protein
J4Z28_RS08000	PF07408	Protein of unknown function (DUF1507)
J4Z28_RS08010	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
J4Z28_RS08020	PF00679	Elongation factor G C-terminus
J4Z28_RS08020	PF14492	Elongation Factor G, domain II
J4Z28_RS08020	PF00009	Elongation factor Tu GTP binding domain
J4Z28_RS08020	PF03144	Elongation factor Tu domain 2
J4Z28_RS08030	PF00459	Inositol monophosphatase family
J4Z28_RS08035	PF06335	Protein of unknown function (DUF1054)
J4Z28_RS08040	PF01566	Natural resistance-associated macrophage protein
J4Z28_RS08055	PF13416	Bacterial extracellular solute-binding protein
J4Z28_RS08065	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS08070	PF00005	ABC transporter
J4Z28_RS08070	PF08402	TOBE domain
J4Z28_RS08080	PF05256	Uncharacterised protein family (UPF0223)
J4Z28_RS08085	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS08085	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
J4Z28_RS08090	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
J4Z28_RS08090	PF02817	e3 binding domain
J4Z28_RS08090	PF00364	Biotin-requiring enzyme
J4Z28_RS08095	PF02780	Transketolase, C-terminal domain
J4Z28_RS08095	PF02779	Transketolase, pyrimidine binding domain
J4Z28_RS08100	PF00676	Dehydrogenase E1 component
J4Z28_RS08110	PF01327	Polypeptide deformylase
J4Z28_RS08115	PF07288	Protein of unknown function (DUF1447)
J4Z28_RS08120	PF17770	Ribonuclease J C-terminal domain
J4Z28_RS08120	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
J4Z28_RS08120	PF00753	Metallo-beta-lactamase superfamily
J4Z28_RS08125	PF02080	TrkA-C domain
J4Z28_RS08125	PF02254	TrkA-N domain
J4Z28_RS08130	PF02322	Cytochrome bd terminal oxidase subunit II
J4Z28_RS08135	PF01654	Cytochrome bd terminal oxidase subunit I
J4Z28_RS08145	PF05524	PEP-utilising enzyme, N-terminal
J4Z28_RS08145	PF00391	PEP-utilising enzyme, mobile domain
J4Z28_RS08145	PF02896	PEP-utilising enzyme, TIM barrel domain
J4Z28_RS08150	PF00381	PTS HPr component phosphorylation site
J4Z28_RS08160	PF17785	PUA-like domain
J4Z28_RS08160	PF10672	S-adenosylmethionine-dependent methyltransferase
J4Z28_RS08175	PF06100	MCRA family
J4Z28_RS08185	PF00005	ABC transporter
J4Z28_RS08190	PF02361	Cobalt transport protein
J4Z28_RS08195	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
J4Z28_RS08195	PF02843	Phosphoribosylglycinamide synthetase, C domain
J4Z28_RS08195	PF02844	Phosphoribosylglycinamide synthetase, N domain
J4Z28_RS08200	PF01808	AICARFT/IMPCHase bienzyme
J4Z28_RS08200	PF02142	MGS-like domain
J4Z28_RS08205	PF00551	Formyl transferase
J4Z28_RS08210	PF00586	AIR synthase related protein, N-terminal domain
J4Z28_RS08210	PF02769	AIR synthase related protein, C-terminal domain
J4Z28_RS08215	PF00156	Phosphoribosyl transferase domain
J4Z28_RS08215	PF13537	Glutamine amidotransferase domain
J4Z28_RS08220	PF18072	Formylglycinamide ribonucleotide amidotransferase linker domain
J4Z28_RS08220	PF02769	AIR synthase related protein, C-terminal domain
J4Z28_RS08220	PF00586	AIR synthase related protein, N-terminal domain
J4Z28_RS08230	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
J4Z28_RS08235	PF01259	SAICAR synthetase
J4Z28_RS08240	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
J4Z28_RS08240	PF02222	ATP-grasp domain
J4Z28_RS08240	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
J4Z28_RS08245	PF00731	AIR carboxylase
J4Z28_RS08250	PF02882	Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
J4Z28_RS08250	PF00763	Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
J4Z28_RS08260	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
J4Z28_RS08265	PF00115	Cytochrome C and Quinol oxidase polypeptide I
J4Z28_RS08270	PF00510	Cytochrome c oxidase subunit III
J4Z28_RS08275	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
J4Z28_RS08280	PF01156	Inosine-uridine preferring nucleoside hydrolase
J4Z28_RS08285	PF00144	Beta-lactamase
J4Z28_RS08290	PF03816	Cell envelope-related transcriptional attenuator domain
J4Z28_RS08295	PF10804	Protein of unknown function (DUF2538) 
J4Z28_RS08300	PF13673	Acetyltransferase (GNAT) domain
J4Z28_RS08305	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
J4Z28_RS08305	PF13457	GW (Gly-Tryp) dipeptide domain
J4Z28_RS08310	PF01047	MarR family
J4Z28_RS08315	PF01757	Acyltransferase family
J4Z28_RS08320	PF00155	Aminotransferase class I and II
J4Z28_RS08325	PF00378	Enoyl-CoA hydratase/isomerase
J4Z28_RS08330	PF12697	Alpha/beta hydrolase family
J4Z28_RS08335	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
J4Z28_RS08335	PF16582	Middle domain of thiamine pyrophosphate
J4Z28_RS08335	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
J4Z28_RS08340	PF00425	chorismate binding enzyme
J4Z28_RS08345	PF01040	UbiA prenyltransferase family
J4Z28_RS08350	PF13302	Acetyltransferase (GNAT) domain
J4Z28_RS08355	PF05154	TM2 domain
J4Z28_RS08365	PF01810	LysE type translocator
J4Z28_RS08405	PF03099	Biotin/lipoate A/B protein ligase family
J4Z28_RS08405	PF10437	Bacterial lipoate protein ligase C-terminus
J4Z28_RS08410	PF09953	Uncharacterized protein conserved in bacteria (DUF2187)
J4Z28_RS08420	PF02872	5'-nucleotidase, C-terminal domain
J4Z28_RS08420	PF00149	Calcineurin-like phosphoesterase
J4Z28_RS08425	PF02386	Cation transport protein
J4Z28_RS08430	PF13180	PDZ domain
J4Z28_RS08435	PF03741	Integral membrane protein TerC family
J4Z28_RS08440	PF16658	Class II release factor RF3, C-terminal domain
J4Z28_RS08440	PF03144	Elongation factor Tu domain 2
J4Z28_RS08440	PF00009	Elongation factor Tu GTP binding domain
J4Z28_RS08450	PF08245	Mur ligase middle domain
J4Z28_RS08450	PF02875	Mur ligase family, glutamate ligase domain
J4Z28_RS08450	PF01225	Mur ligase family, catalytic domain
J4Z28_RS08455	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase
J4Z28_RS08455	PF04101	Glycosyltransferase family 28 C-terminal domain
J4Z28_RS08460	PF07690	Major Facilitator Superfamily
J4Z28_RS08470	PF00756	Putative esterase
J4Z28_RS08475	PF01594	AI-2E family transporter
J4Z28_RS08505	PF17760	UvrA interaction domain
J4Z28_RS08505	PF17755	UvrA DNA-binding domain
J4Z28_RS08535	PF00999	Sodium/hydrogen exchanger family
J4Z28_RS08535	PF02254	TrkA-N domain
J4Z28_RS08535	PF02080	TrkA-C domain
J4Z28_RS08540	PF03448	MgtE intracellular N domain
J4Z28_RS08540	PF01769	Divalent cation transporter
J4Z28_RS08540	PF00571	CBS domain
J4Z28_RS08545	PF00849	RNA pseudouridylate synthase
J4Z28_RS08550	PF01513	ATP-NAD kinase
J4Z28_RS08555	PF04607	Region found in RelA / SpoT proteins
J4Z28_RS08570	PF01152	Bacterial-like globin
J4Z28_RS08580	PF08439	Oligopeptidase F
J4Z28_RS08580	PF01432	Peptidase family M3
J4Z28_RS08590	PF05389	Negative regulator of genetic competence (MecA)
J4Z28_RS08600	PF03960	ArsC family
J4Z28_RS08605	PF00579	tRNA synthetases class I (W and Y)
J4Z28_RS08610	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
J4Z28_RS08620	PF00005	ABC transporter
J4Z28_RS08620	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
J4Z28_RS08625	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS08625	PF12911	N-terminal TM domain of oligopeptide transport permease C
J4Z28_RS08630	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS08640	PF00109	Beta-ketoacyl synthase, N-terminal domain
J4Z28_RS08640	PF02801	Beta-ketoacyl synthase, C-terminal domain
J4Z28_RS08645	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
J4Z28_RS08645	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
J4Z28_RS08660	PF00004	ATPase family associated with various cellular activities (AAA)
J4Z28_RS08660	PF02861	Clp amino terminal domain, pathogenicity island component
J4Z28_RS08660	PF10431	C-terminal, D2-small domain, of ClpB protein 
J4Z28_RS08660	PF07724	AAA domain (Cdc48 subfamily)
J4Z28_RS08660	PF17871	AAA lid domain
J4Z28_RS08665	PF01757	Acyltransferase family
J4Z28_RS08670	PF01883	Iron-sulfur cluster assembly protein
J4Z28_RS08680	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS08680	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
J4Z28_RS08695	PF07457	Protein of unknown function (DUF1516)
J4Z28_RS08700	PF01557	Fumarylacetoacetate (FAA) hydrolase family
J4Z28_RS08705	PF12705	PD-(D/E)XK nuclease superfamily
J4Z28_RS08705	PF00580	UvrD/REP helicase N-terminal domain
J4Z28_RS08705	PF13361	UvrD-like helicase C-terminal domain
J4Z28_RS08710	PF12705	PD-(D/E)XK nuclease superfamily
J4Z28_RS08710	PF13361	UvrD-like helicase C-terminal domain
J4Z28_RS08715	PF10502	Signal peptidase, peptidase S26 
J4Z28_RS08720	PF10502	Signal peptidase, peptidase S26 
J4Z28_RS08725	PF09335	SNARE associated Golgi protein
J4Z28_RS08730	PF00342	Phosphoglucose isomerase
J4Z28_RS08735	PF00764	Arginosuccinate synthase
J4Z28_RS08740	PF00206	Lyase
J4Z28_RS08740	PF14698	Argininosuccinate lyase C-terminal
J4Z28_RS08745	PF03009	Glycerophosphoryl diester phosphodiesterase family
J4Z28_RS08750	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
J4Z28_RS08750	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
J4Z28_RS08755	PF00202	Aminotransferase class-III
J4Z28_RS08765	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
J4Z28_RS08770	PF00575	S1 RNA binding domain
J4Z28_RS08775	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
J4Z28_RS08785	PF13244	Domain of unknown function (DUF4040)
J4Z28_RS08785	PF00361	Proton-conducting membrane transporter
J4Z28_RS08785	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
J4Z28_RS08790	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
J4Z28_RS08795	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
J4Z28_RS08800	PF00361	Proton-conducting membrane transporter
J4Z28_RS08805	PF01899	Na+/H+ ion antiporter subunit
J4Z28_RS08810	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
J4Z28_RS08815	PF03334	Na+/H+ antiporter subunit
J4Z28_RS08825	PF03061	Thioesterase superfamily
J4Z28_RS08830	PF03553	Na+/H+ antiporter family
J4Z28_RS08830	PF13726	Na+-H+ antiporter family
J4Z28_RS08835	PF02789	Cytosol aminopeptidase family, N-terminal domain
J4Z28_RS08835	PF00883	Cytosol aminopeptidase family, catalytic domain
J4Z28_RS08840	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS08845	PF01521	Iron-sulphur cluster biosynthesis
J4Z28_RS08850	PF07293	Protein of unknown function (DUF1450)
J4Z28_RS08855	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS08860	PF07315	Protein of unknown function (DUF1462)
J4Z28_RS08865	PF01106	NifU-like domain
J4Z28_RS08870	PF04914	DltD protein
J4Z28_RS08875	PF00550	Phosphopantetheine attachment site
J4Z28_RS08880	PF03062	MBOAT, membrane-bound O-acyltransferase family
J4Z28_RS08885	PF13193	AMP-binding enzyme C-terminal domain
J4Z28_RS08885	PF00501	AMP-binding enzyme
J4Z28_RS08895	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
J4Z28_RS08895	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
J4Z28_RS08900	PF13344	Haloacid dehalogenase-like hydrolase
J4Z28_RS08905	PF01934	Protein of unknown function DUF86
J4Z28_RS08915	PF06265	Protein of unknown function (DUF1027)
J4Z28_RS08920	PF16881	N-terminal domain of lipoyl synthase of Radical_SAM family
J4Z28_RS08920	PF04055	Radical SAM superfamily
J4Z28_RS08925	PF02872	5'-nucleotidase, C-terminal domain
J4Z28_RS08930	PF01925	Sulfite exporter TauE/SafE
J4Z28_RS08935	PF01904	Protein of unknown function DUF72
J4Z28_RS08940	PF00571	CBS domain
J4Z28_RS08940	PF03471	Transporter associated domain
J4Z28_RS08940	PF01595	Cyclin M transmembrane N-terminal domain
J4Z28_RS08960	PF01510	N-acetylmuramoyl-L-alanine amidase
J4Z28_RS08960	PF05257	CHAP domain
J4Z28_RS08960	PF08460	Bacterial SH3 domain
J4Z28_RS08990	PF05908	Poly-gamma-glutamate hydrolase
J4Z28_RS09115	PF00692	dUTPase
J4Z28_RS09165	PF01695	IstB-like ATP binding protein
J4Z28_RS09185	PF00436	Single-strand binding protein family
J4Z28_RS09225	PF10711	Hypothetical protein (DUF2513)
J4Z28_RS09265	PF02899	Phage integrase, N-terminal SAM-like domain
J4Z28_RS09265	PF00589	Phage integrase family
J4Z28_RS09270	PF01458	Uncharacterized protein family (UPF0051)
J4Z28_RS09275	PF01592	NifU-like N terminal domain
J4Z28_RS09280	PF00266	Aminotransferase class-V
J4Z28_RS09285	PF01458	Uncharacterized protein family (UPF0051)
J4Z28_RS09290	PF00005	ABC transporter
J4Z28_RS09300	PF05532	CsbD-like
J4Z28_RS09310	PF03180	NLPA lipoprotein
J4Z28_RS09315	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS09320	PF09383	NIL domain
J4Z28_RS09320	PF00005	ABC transporter
J4Z28_RS09330	PF01751	Toprim domain
J4Z28_RS09335	PF01597	Glycine cleavage H-protein
J4Z28_RS09340	PF03960	ArsC family
J4Z28_RS09345	PF00085	Thioredoxin
J4Z28_RS09355	PF01487	Type I 3-dehydroquinase
J4Z28_RS09360	PF02566	OsmC-like protein
J4Z28_RS09380	PF00300	Histidine phosphatase superfamily (branch 1)
J4Z28_RS09415	PF05908	Poly-gamma-glutamate hydrolase
J4Z28_RS09430	PF00313	'Cold-shock' DNA-binding domain
J4Z28_RS09435	PF01545	Cation efflux family
J4Z28_RS09435	PF16916	Dimerisation domain of Zinc Transporter
J4Z28_RS09455	PF02386	Cation transport protein
J4Z28_RS09495	PF01668	SmpB protein
J4Z28_RS09500	PF08206	Ribonuclease B OB domain
J4Z28_RS09500	PF00773	RNB domain
J4Z28_RS09500	PF00575	S1 RNA binding domain
J4Z28_RS09500	PF17876	Cold shock domain
J4Z28_RS09505	PF12146	Serine aminopeptidase, S33
J4Z28_RS09510	PF03840	Preprotein translocase SecG subunit
J4Z28_RS09520	PF00113	Enolase, C-terminal TIM barrel domain
J4Z28_RS09520	PF03952	Enolase, N-terminal domain
J4Z28_RS09525	PF01676	Metalloenzyme superfamily
J4Z28_RS09525	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
J4Z28_RS09530	PF00121	Triosephosphate isomerase
J4Z28_RS09535	PF00162	Phosphoglycerate kinase
J4Z28_RS09540	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
J4Z28_RS09540	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
J4Z28_RS09545	PF04198	Putative sugar-binding domain
J4Z28_RS09560	PF01370	NAD dependent epimerase/dehydratase family
J4Z28_RS09560	PF08338	Domain of unknown function (DUF1731)
J4Z28_RS09570	PF00574	Clp protease
J4Z28_RS09580	PF10298	WhiA N-terminal LAGLIDADG-like domain
J4Z28_RS09580	PF14527	WhiA LAGLIDADG-like domain
J4Z28_RS09580	PF02650	WhiA C-terminal HTH domain
J4Z28_RS09585	PF01933	Uncharacterised protein family UPF0052
J4Z28_RS09590	PF03668	P-loop ATPase protein family
J4Z28_RS09595	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS09605	PF14602	Hexapeptide repeat of succinyl-transferase
J4Z28_RS09610	PF01790	Prolipoprotein diacylglyceryl transferase
J4Z28_RS09615	PF07475	HPr Serine kinase C-terminal domain
J4Z28_RS09615	PF02603	HPr Serine kinase N terminus
J4Z28_RS09620	PF00005	ABC transporter
J4Z28_RS09620	PF17755	UvrA DNA-binding domain
J4Z28_RS09620	PF17760	UvrA interaction domain
J4Z28_RS09625	PF00271	Helicase conserved C-terminal domain
J4Z28_RS09625	PF17757	UvrB interaction domain
J4Z28_RS09625	PF12344	Ultra-violet resistance protein B
J4Z28_RS09625	PF02151	UvrB/uvrC motif
J4Z28_RS09625	PF04851	Type III restriction enzyme, res subunit
J4Z28_RS09640	PF01476	LysM domain
J4Z28_RS09640	PF05257	CHAP domain
J4Z28_RS09650	PF02810	SEC-C motif
J4Z28_RS09650	PF07516	SecA Wing and Scaffold domain
J4Z28_RS09650	PF01043	SecA preprotein cross-linking domain
J4Z28_RS09650	PF07517	SecA DEAD-like domain
J4Z28_RS09655	PF16321	Sigma 54 modulation/S30EA ribosomal protein C terminus
J4Z28_RS09655	PF02482	Sigma 54 modulation protein / S30EA ribosomal protein
J4Z28_RS09665	PF00271	Helicase conserved C-terminal domain
J4Z28_RS09665	PF04851	Type III restriction enzyme, res subunit
J4Z28_RS09670	PF02645	Uncharacterised protein, DegV family COG1307
J4Z28_RS09675	PF09186	Domain of unknown function (DUF1949)
J4Z28_RS09675	PF01205	Uncharacterized protein family UPF0029
J4Z28_RS09680	PF00953	Glycosyl transferase family 4
J4Z28_RS09685	PF00990	Diguanylate cyclase, GGDEF domain
J4Z28_RS09685	PF07694	5TMR of 5TMR-LYT
J4Z28_RS09700	PF01546	Peptidase family M20/M25/M40
J4Z28_RS09700	PF07687	Peptidase dimerisation domain
J4Z28_RS09705	PF02595	Glycerate kinase family
J4Z28_RS09725	PF01565	FAD binding domain 
J4Z28_RS09725	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
J4Z28_RS09740	PF00005	ABC transporter
J4Z28_RS09745	PF01032	FecCD transport family
J4Z28_RS09750	PF01032	FecCD transport family
J4Z28_RS09760	PF00268	Ribonucleotide reductase, small chain
J4Z28_RS09765	PF02867	Ribonucleotide reductase, barrel domain
J4Z28_RS09765	PF00317	Ribonucleotide reductase, all-alpha domain
J4Z28_RS09765	PF08343	Ribonucleotide reductase N-terminal
J4Z28_RS09770	PF07972	NrdI Flavodoxin like 
J4Z28_RS09780	PF14489	QueF-like protein
J4Z28_RS09785	PF00854	POT family
J4Z28_RS09795	PF00781	Diacylglycerol kinase catalytic domain
J4Z28_RS09800	PF00171	Aldehyde dehydrogenase family
J4Z28_RS09800	PF00465	Iron-containing alcohol dehydrogenase 
J4Z28_RS09805	PF06941	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
J4Z28_RS09810	PF00155	Aminotransferase class I and II
J4Z28_RS09815	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS09820	PF00571	CBS domain
J4Z28_RS09820	PF00005	ABC transporter
J4Z28_RS09825	PF00270	DEAD/DEAH box helicase
J4Z28_RS09825	PF00570	HRDC domain
J4Z28_RS09825	PF16124	RecQ zinc-binding
J4Z28_RS09825	PF09382	RQC domain
J4Z28_RS09825	PF00271	Helicase conserved C-terminal domain
J4Z28_RS09830	PF00005	ABC transporter
J4Z28_RS09830	PF16326	ABC transporter C-terminal domain
J4Z28_RS09830	PF12848	ABC transporter
J4Z28_RS09845	PF00884	Sulfatase
J4Z28_RS09855	PF02682	Carboxyltransferase domain, subdomain C and D
J4Z28_RS09870	PF00425	chorismate binding enzyme
J4Z28_RS09870	PF04715	Anthranilate synthase component I, N terminal region
J4Z28_RS09875	PF00117	Glutamine amidotransferase class-I
J4Z28_RS09880	PF06508	Queuosine biosynthesis protein QueC
J4Z28_RS09885	PF01242	6-pyruvoyl tetrahydropterin synthase
J4Z28_RS09890	PF04055	Radical SAM superfamily
J4Z28_RS09915	PF00072	Response regulator receiver domain
J4Z28_RS09915	PF00486	Transcriptional regulatory protein, C terminal
J4Z28_RS09920	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS09920	PF00512	His Kinase A (phospho-acceptor) domain
J4Z28_RS09925	PF00535	Glycosyl transferase family 2
J4Z28_RS09930	PF00248	Aldo/keto reductase family
J4Z28_RS09935	PF00571	CBS domain
J4Z28_RS09935	PF01595	Cyclin M transmembrane N-terminal domain
J4Z28_RS09935	PF03471	Transporter associated domain
J4Z28_RS09940	PF01979	Amidohydrolase family
J4Z28_RS09945	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
J4Z28_RS09945	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
J4Z28_RS09950	PF00294	pfkB family carbohydrate kinase
J4Z28_RS09955	PF00455	DeoR C terminal sensor domain
J4Z28_RS09955	PF08220	DeoR-like helix-turn-helix domain
J4Z28_RS09960	PF04073	Aminoacyl-tRNA editing domain
J4Z28_RS09970	PF07690	Major Facilitator Superfamily
J4Z28_RS09985	PF00875	DNA photolyase
J4Z28_RS09985	PF03441	FAD binding domain of DNA photolyase
J4Z28_RS09990	PF00939	Sodium:sulfate symporter transmembrane region
J4Z28_RS09995	PF02866	lactate/malate dehydrogenase, alpha/beta C-terminal domain
J4Z28_RS09995	PF00056	lactate/malate dehydrogenase, NAD binding domain
J4Z28_RS10005	PF07683	Cobalamin synthesis protein cobW C-terminal domain
J4Z28_RS10005	PF02492	CobW/HypB/UreG, nucleotide-binding domain
J4Z28_RS10010	PF01047	MarR family
J4Z28_RS10015	PF00005	ABC transporter
J4Z28_RS10015	PF00664	ABC transporter transmembrane region
J4Z28_RS10020	PF00664	ABC transporter transmembrane region
J4Z28_RS10020	PF00005	ABC transporter
J4Z28_RS10025	PF02673	Bacitracin resistance protein BacA
J4Z28_RS10040	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
J4Z28_RS10045	PF03641	Possible lysine decarboxylase
J4Z28_RS10070	PF04306	Protein of unknown function (DUF456)
J4Z28_RS10075	PF07690	Major Facilitator Superfamily
J4Z28_RS10080	PF03466	LysR substrate binding domain
J4Z28_RS10080	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
J4Z28_RS10095	PF00970	Oxidoreductase FAD-binding domain
J4Z28_RS10095	PF00042	Globin
J4Z28_RS10095	PF00175	Oxidoreductase NAD-binding domain 
J4Z28_RS10100	PF01814	Hemerythrin HHE cation binding domain
J4Z28_RS10100	PF04405	Domain of Unknown function (DUF542)  
J4Z28_RS10110	PF01709	Transcriptional regulator
J4Z28_RS10130	PF01476	LysM domain
J4Z28_RS10130	PF05257	CHAP domain
J4Z28_RS10135	PF01384	Phosphate transporter family
J4Z28_RS10140	PF01865	Protein of unknown function DUF47
J4Z28_RS10145	PF02687	FtsX-like permease family
J4Z28_RS10150	PF00005	ABC transporter
J4Z28_RS10155	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
J4Z28_RS10160	PF00072	Response regulator receiver domain
J4Z28_RS10160	PF00486	Transcriptional regulatory protein, C terminal
J4Z28_RS10165	PF01370	NAD dependent epimerase/dehydratase family
J4Z28_RS10190	PF00005	ABC transporter
J4Z28_RS10195	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
J4Z28_RS10195	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J4Z28_RS10200	PF01773	Na+ dependent nucleoside transporter N-terminus
J4Z28_RS10200	PF07662	Na+ dependent nucleoside transporter C-terminus
J4Z28_RS10205	PF00664	ABC transporter transmembrane region
J4Z28_RS10205	PF00005	ABC transporter
J4Z28_RS10210	PF01467	Cytidylyltransferase-like
J4Z28_RS10215	PF00535	Glycosyl transferase family 2
J4Z28_RS10220	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
J4Z28_RS10225	PF01061	ABC-2 type transporter
J4Z28_RS10230	PF00005	ABC transporter
J4Z28_RS10235	PF03808	Glycosyl transferase WecB/TagA/CpsF family
J4Z28_RS10245	PF01325	Iron dependent repressor, N-terminal DNA binding domain
J4Z28_RS10245	PF02742	Iron dependent repressor, metal binding and dimerisation domain
J4Z28_RS10245	PF18357	Diphteria toxin repressor SH3 domain
J4Z28_RS10250	PF00005	ABC transporter
J4Z28_RS10255	PF00950	ABC 3 transport family
J4Z28_RS10260	PF01297	Zinc-uptake complex component A periplasmic
J4Z28_RS10265	PF00999	Sodium/hydrogen exchanger family
J4Z28_RS10270	PF03334	Na+/H+ antiporter subunit
J4Z28_RS10275	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
J4Z28_RS10280	PF01899	Na+/H+ ion antiporter subunit
J4Z28_RS10285	PF00361	Proton-conducting membrane transporter
J4Z28_RS10290	PF00420	NADH-ubiquinone/plastoquinone oxidoreductase chain 4L
J4Z28_RS10295	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
J4Z28_RS10300	PF13244	Domain of unknown function (DUF4040)
J4Z28_RS10300	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
J4Z28_RS10300	PF00361	Proton-conducting membrane transporter
J4Z28_RS10330	PF00561	alpha/beta hydrolase fold
J4Z28_RS10350	PF13419	Haloacid dehalogenase-like hydrolase
J4Z28_RS10355	PF01032	FecCD transport family
J4Z28_RS10360	PF01497	Periplasmic binding protein
J4Z28_RS10365	PF13411	MerR HTH family regulatory protein
J4Z28_RS10365	PF07739	TipAS antibiotic-recognition domain
J4Z28_RS10370	PF10576	Iron-sulfur binding domain of endonuclease III
J4Z28_RS10370	PF00633	Helix-hairpin-helix motif
J4Z28_RS10370	PF00730	HhH-GPD superfamily base excision DNA repair protein
J4Z28_RS10375	PF03485	Arginyl tRNA synthetase N terminal domain
J4Z28_RS10375	PF05746	DALR anticodon binding domain
J4Z28_RS10375	PF00750	tRNA synthetases class I (R)
J4Z28_RS10390	PF08240	Alcohol dehydrogenase GroES-like domain
J4Z28_RS10390	PF00107	Zinc-binding dehydrogenase
J4Z28_RS10395	PF09861	Lactate racemase N-terminal domain
J4Z28_RS10400	PF02540	NAD synthase
J4Z28_RS10405	PF00731	AIR carboxylase
J4Z28_RS10410	PF01969	Protein of unknown function DUF111
J4Z28_RS10415	PF08741	YwhD family
J4Z28_RS10420	PF01966	HD domain
J4Z28_RS10430	PF00248	Aldo/keto reductase family
J4Z28_RS10440	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS10440	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
J4Z28_RS10445	PF07293	Protein of unknown function (DUF1450)
J4Z28_RS10450	PF08544	GHMP kinases C terminal 
J4Z28_RS10450	PF00288	GHMP kinases N terminal domain
J4Z28_RS10460	PF00288	GHMP kinases N terminal domain
J4Z28_RS10465	PF03099	Biotin/lipoate A/B protein ligase family
J4Z28_RS10470	PF01515	Phosphate acetyl/butaryl transferase
J4Z28_RS10475	PF06778	Chlorite dismutase
J4Z28_RS10495	PF13520	Amino acid permease
J4Z28_RS10510	PF03167	Uracil DNA glycosylase superfamily
J4Z28_RS10520	PF08543	Phosphomethylpyrimidine kinase
J4Z28_RS10525	PF17412	Family of unknown function
J4Z28_RS10540	PF00108	Thiolase, N-terminal domain
J4Z28_RS10540	PF02803	Thiolase, C-terminal domain
J4Z28_RS10545	PF00501	AMP-binding enzyme
J4Z28_RS10555	PF01380	SIS domain
J4Z28_RS10560	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
J4Z28_RS10565	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
J4Z28_RS10575	PF02585	GlcNAc-PI de-N-acetylase
J4Z28_RS10580	PF02649	Type I GTP cyclohydrolase folE2
J4Z28_RS10600	PF17961	Bacterial Ig domain
J4Z28_RS10600	PF00746	LPXTG cell wall anchor motif
J4Z28_RS10600	PF10425	C-terminus of bacterial fibrinogen-binding adhesin
J4Z28_RS10600	PF04650	YSIRK type signal peptide
J4Z28_RS10600	PF17210	SdrD B-like domain
J4Z28_RS10615	PF14437	MafB19-like deaminase
J4Z28_RS10620	PF01712	Deoxynucleoside kinase
J4Z28_RS10625	PF01712	Deoxynucleoside kinase
J4Z28_RS10640	PF13419	Haloacid dehalogenase-like hydrolase
J4Z28_RS10645	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
J4Z28_RS10650	PF08240	Alcohol dehydrogenase GroES-like domain
J4Z28_RS10650	PF00107	Zinc-binding dehydrogenase
J4Z28_RS10655	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
J4Z28_RS10660	PF01063	Amino-transferase class IV
J4Z28_RS10665	PF01370	NAD dependent epimerase/dehydratase family
J4Z28_RS10675	PF02423	Ornithine cyclodeaminase/mu-crystallin family
J4Z28_RS10685	PF01546	Peptidase family M20/M25/M40
J4Z28_RS10685	PF07687	Peptidase dimerisation domain
J4Z28_RS10690	PF03143	Elongation factor Tu C-terminal domain
J4Z28_RS10690	PF03144	Elongation factor Tu domain 2
J4Z28_RS10690	PF00009	Elongation factor Tu GTP binding domain
J4Z28_RS10695	PF00679	Elongation factor G C-terminus
J4Z28_RS10695	PF00009	Elongation factor Tu GTP binding domain
J4Z28_RS10695	PF03764	Elongation factor G, domain IV
J4Z28_RS10695	PF14492	Elongation Factor G, domain II
J4Z28_RS10695	PF03144	Elongation factor Tu domain 2
J4Z28_RS10700	PF00177	Ribosomal protein S7p/S5e
J4Z28_RS10705	PF00164	Ribosomal protein S12/S23
J4Z28_RS10710	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
J4Z28_RS10715	PF00623	RNA polymerase Rpb1, domain 2
J4Z28_RS10715	PF04983	RNA polymerase Rpb1, domain 3
J4Z28_RS10715	PF05000	RNA polymerase Rpb1, domain 4
J4Z28_RS10715	PF04998	RNA polymerase Rpb1, domain 5
J4Z28_RS10715	PF04997	RNA polymerase Rpb1, domain 1
J4Z28_RS10720	PF04563	RNA polymerase beta subunit
J4Z28_RS10720	PF04561	RNA polymerase Rpb2, domain 2
J4Z28_RS10720	PF04565	RNA polymerase Rpb2, domain 3
J4Z28_RS10720	PF10385	RNA polymerase beta subunit external 1 domain
J4Z28_RS10720	PF04560	RNA polymerase Rpb2, domain 7
J4Z28_RS10720	PF00562	RNA polymerase Rpb2, domain 6
J4Z28_RS10725	PF05175	Methyltransferase small domain
J4Z28_RS10730	PF16320	Ribosomal protein L7/L12 dimerisation domain
J4Z28_RS10730	PF00542	Ribosomal protein L7/L12 C-terminal domain
J4Z28_RS10735	PF00466	Ribosomal protein L10
J4Z28_RS10740	PF00687	Ribosomal protein L1p/L10e family
J4Z28_RS10745	PF03946	Ribosomal protein L11, N-terminal domain
J4Z28_RS10745	PF00298	Ribosomal protein L11, RNA binding domain
J4Z28_RS10750	PF02357	Transcription termination factor nusG
J4Z28_RS10755	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
J4Z28_RS10760	PF00471	Ribosomal protein L33
J4Z28_RS10770	PF05991	YacP-like NYN domain
J4Z28_RS10775	PF08032	RNA 2'-O ribose methyltransferase substrate binding
J4Z28_RS10775	PF00588	SpoU rRNA Methylase family
J4Z28_RS10780	PF00636	Ribonuclease III domain
J4Z28_RS10785	PF01406	tRNA synthetases class I (C) catalytic domain
J4Z28_RS10785	PF09190	DALR domain
J4Z28_RS10790	PF00132	Bacterial transferase hexapeptide (six repeats)
J4Z28_RS10795	PF00749	tRNA synthetases class I (E and Q), catalytic domain
J4Z28_RS10805	PF18073	Rubredoxin metal binding domain
J4Z28_RS10810	PF10431	C-terminal, D2-small domain, of ClpB protein 
J4Z28_RS10810	PF02861	Clp amino terminal domain, pathogenicity island component
J4Z28_RS10810	PF17871	AAA lid domain
J4Z28_RS10810	PF07724	AAA domain (Cdc48 subfamily)
J4Z28_RS10810	PF00004	ATPase family associated with various cellular activities (AAA)
J4Z28_RS10815	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
J4Z28_RS10820	PF02151	UvrB/uvrC motif
J4Z28_RS10825	PF17727	CtsR C-terminal dimerization domain
J4Z28_RS10825	PF05848	CtsR N-terminal HTH domain
J4Z28_RS10830	PF01773	Na+ dependent nucleoside transporter N-terminus
J4Z28_RS10830	PF07662	Na+ dependent nucleoside transporter C-terminus
J4Z28_RS10840	PF01174	SNO glutamine amidotransferase family
J4Z28_RS10845	PF01680	SOR/SNZ family
J4Z28_RS10850	PF00392	Bacterial regulatory proteins, gntR family
J4Z28_RS10850	PF00155	Aminotransferase class I and II
J4Z28_RS10935	PF00152	tRNA synthetases class II (D, K and N) 
J4Z28_RS10935	PF01336	OB-fold nucleic acid binding domain
J4Z28_RS10940	PF01288	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
J4Z28_RS10945	PF02152	Dihydroneopterin aldolase
J4Z28_RS10950	PF00809	Pterin binding enzyme
J4Z28_RS10955	PF00291	Pyridoxal-phosphate dependent enzyme
J4Z28_RS10960	PF01430	Hsp33 protein
J4Z28_RS10965	PF01434	Peptidase family M41
J4Z28_RS10965	PF06480	FtsH Extracellular
J4Z28_RS10965	PF17862	AAA+ lid domain
J4Z28_RS10965	PF00004	ATPase family associated with various cellular activities (AAA)
J4Z28_RS10970	PF00156	Phosphoribosyl transferase domain
J4Z28_RS10975	PF11734	TilS substrate C-terminal domain
J4Z28_RS10975	PF01171	PP-loop family
J4Z28_RS10980	PF00575	S1 RNA binding domain
J4Z28_RS10990	PF01479	S4 domain
J4Z28_RS10995	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
J4Z28_RS10995	PF03819	MazG nucleotide pyrophosphohydrolase domain
J4Z28_RS11000	PF14667	Polysaccharide biosynthesis C-terminal domain
J4Z28_RS11000	PF01943	Polysaccharide biosynthesis protein
J4Z28_RS11005	PF17757	UvrB interaction domain
J4Z28_RS11005	PF03461	TRCF domain
J4Z28_RS11005	PF00271	Helicase conserved C-terminal domain
J4Z28_RS11005	PF00270	DEAD/DEAH box helicase
J4Z28_RS11005	PF02559	CarD-like/TRCF domain
J4Z28_RS11010	PF01195	Peptidyl-tRNA hydrolase
J4Z28_RS11015	PF01386	Ribosomal L25p family
J4Z28_RS11015	PF14693	Ribosomal protein TL5, C-terminal domain
J4Z28_RS11020	PF14572	Phosphoribosyl synthetase-associated domain
J4Z28_RS11020	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
J4Z28_RS11025	PF00483	Nucleotidyl transferase
J4Z28_RS11025	PF00132	Bacterial transferase hexapeptide (six repeats)
J4Z28_RS11030	PF04026	SpoVG
J4Z28_RS11035	PF01042	Endoribonuclease L-PSP
J4Z28_RS11040	PF00156	Phosphoribosyl transferase domain
J4Z28_RS11040	PF09182	Bacterial purine repressor, N-terminal
J4Z28_RS11045	PF00288	GHMP kinases N terminal domain
J4Z28_RS11045	PF08544	GHMP kinases C terminal 
J4Z28_RS11050	PF06257	Biofilm formation stimulator VEG
J4Z28_RS11055	PF00398	Ribosomal RNA adenine dimethylase
J4Z28_RS11060	PF01751	Toprim domain
J4Z28_RS11060	PF13331	Domain of unknown function (DUF4093)
J4Z28_RS11065	PF01026	TatD related DNase
J4Z28_RS11070	PF01588	Putative tRNA binding domain
J4Z28_RS11070	PF09334	tRNA synthetases class I (M)
J4Z28_RS11070	PF08264	Anticodon-binding domain of tRNA
J4Z28_RS11075	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
J4Z28_RS11080	PF01541	GIY-YIG catalytic domain
J4Z28_RS11085	PF05175	Methyltransferase small domain
J4Z28_RS11090	PF06156	Initiation control protein YabA
J4Z28_RS11095	PF04468	PSP1 C-terminal conserved region
J4Z28_RS11100	PF09115	DNA polymerase III, delta subunit, C terminal
J4Z28_RS11105	PF06153	Cyclic-di-AMP receptor
J4Z28_RS11110	PF02223	Thymidylate kinase
J4Z28_RS11115	PF03711	Orn/Lys/Arg decarboxylase, C-terminal domain
J4Z28_RS11115	PF01276	Orn/Lys/Arg decarboxylase, major domain
J4Z28_RS11120	PF13302	Acetyltransferase (GNAT) domain
J4Z28_RS11140	PF02132	RecR protein
J4Z28_RS11140	PF13662	Toprim domain
J4Z28_RS11145	PF02575	YbaB/EbfC DNA-binding family
J4Z28_RS11150	PF12169	DNA polymerase III subunits gamma and tau domain III
J4Z28_RS11170	PF03601	Conserved hypothetical protein 698
J4Z28_RS11175	PF03466	LysR substrate binding domain
J4Z28_RS11175	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
J4Z28_RS11185	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS11185	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
J4Z28_RS11190	PF00310	Glutamine amidotransferases class-II
J4Z28_RS11190	PF01493	GXGXG motif
J4Z28_RS11190	PF01645	Conserved region in glutamate synthase
J4Z28_RS11190	PF04898	Glutamate synthase central domain
J4Z28_RS11195	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
J4Z28_RS11195	PF03466	LysR substrate binding domain
J4Z28_RS11210	PF00293	NUDIX domain
J4Z28_RS11220	PF00534	Glycosyl transferases group 1
J4Z28_RS11220	PF09318	Glycosyl transferase 1 domain A
J4Z28_RS11225	PF05257	CHAP domain
J4Z28_RS11225	PF01476	LysM domain
J4Z28_RS11230	PF03180	NLPA lipoprotein
J4Z28_RS11235	PF00528	Binding-protein-dependent transport system inner membrane component
J4Z28_RS11240	PF00005	ABC transporter
J4Z28_RS11240	PF09383	NIL domain
J4Z28_RS11245	PF01053	Cys/Met metabolism PLP-dependent enzyme
J4Z28_RS11250	PF00291	Pyridoxal-phosphate dependent enzyme
J4Z28_RS11260	PF00209	Sodium:neurotransmitter symporter family
J4Z28_RS11270	PF12146	Serine aminopeptidase, S33
J4Z28_RS11285	PF10057	Uncharacterized conserved protein (DUF2294)
J4Z28_RS11290	PF10070	Uncharacterized protein conserved in bacteria (DUF2309)
J4Z28_RS11295	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
J4Z28_RS11295	PF00361	Proton-conducting membrane transporter
J4Z28_RS11310	PF07683	Cobalamin synthesis protein cobW C-terminal domain
J4Z28_RS11310	PF02492	CobW/HypB/UreG, nucleotide-binding domain
J4Z28_RS11350	PF02899	Phage integrase, N-terminal SAM-like domain
J4Z28_RS11350	PF00589	Phage integrase family
J4Z28_RS11360	PF00117	Glutamine amidotransferase class-I
J4Z28_RS11360	PF00958	GMP synthase C terminal domain
J4Z28_RS11365	PF00571	CBS domain
J4Z28_RS11365	PF00478	IMP dehydrogenase / GMP reductase domain
J4Z28_RS11370	PF00860	Permease family
J4Z28_RS11380	PF11181	Heat induced stress protein YflT
J4Z28_RS11395	PF00375	Sodium:dicarboxylate symporter family
J4Z28_RS11400	PF00881	Nitroreductase family
J4Z28_RS11410	PF00578	AhpC/TSA family
J4Z28_RS11415	PF13192	Thioredoxin domain
J4Z28_RS11415	PF07992	Pyridine nucleotide-disulphide oxidoreductase
J4Z28_RS11430	PF00300	Histidine phosphatase superfamily (branch 1)
J4Z28_RS11435	PF01810	LysE type translocator
J4Z28_RS11455	PF01084	Ribosomal protein S18
J4Z28_RS11460	PF00436	Single-strand binding protein family
J4Z28_RS11465	PF01250	Ribosomal protein S6
J4Z28_RS11480	PF06071	Protein of unknown function (DUF933)
J4Z28_RS11480	PF01926	50S ribosome-binding GTPase
J4Z28_RS11485	PF06107	Bacterial protein of unknown function (DUF951)
J4Z28_RS11490	PF00924	Mechanosensitive ion channel
J4Z28_RS11495	PF17762	HTH domain found in ParB protein
J4Z28_RS11495	PF02195	ParB-like nuclease domain
J4Z28_RS11500	PF01053	Cys/Met metabolism PLP-dependent enzyme
J4Z28_RS11505	PF01053	Cys/Met metabolism PLP-dependent enzyme
J4Z28_RS11510	PF02219	Methylenetetrahydrofolate reductase
J4Z28_RS11510	PF02574	Homocysteine S-methyltransferase
J4Z28_RS11515	PF08267	Cobalamin-independent synthase, N-terminal domain
J4Z28_RS11515	PF01717	Cobalamin-independent synthase, Catalytic domain
J4Z28_RS11525	PF02803	Thiolase, C-terminal domain
J4Z28_RS11525	PF00108	Thiolase, N-terminal domain
J4Z28_RS11540	PF01381	Helix-turn-helix
J4Z28_RS11550	PF00005	ABC transporter
J4Z28_RS11600	PF03601	Conserved hypothetical protein 698
J4Z28_RS11605	PF13610	DDE domain
J4Z28_RS11660	PF13610	DDE domain
J4Z28_RS11680	PF17961	Bacterial Ig domain
J4Z28_RS11680	PF04650	YSIRK type signal peptide
J4Z28_RS11680	PF17210	SdrD B-like domain
J4Z28_RS11680	PF00746	LPXTG cell wall anchor motif
J4Z28_RS11680	PF00746	LPXTG cell wall anchor motif
J4Z28_RS11680	PF04650	YSIRK type signal peptide
J4Z28_RS11680	PF17210	SdrD B-like domain
J4Z28_RS11680	PF17961	Bacterial Ig domain
J4Z28_RS11690	PF10502	Signal peptidase, peptidase S26 
J4Z28_RS11705	PF00005	ABC transporter
J4Z28_RS11710	PF02687	FtsX-like permease family
J4Z28_RS11720	PF04650	YSIRK type signal peptide
J4Z28_RS11725	PF02687	FtsX-like permease family
J4Z28_RS11725	PF12704	MacB-like periplasmic core domain
J4Z28_RS11730	PF00005	ABC transporter
J4Z28_RS11765	PF17762	HTH domain found in ParB protein
J4Z28_RS11765	PF02195	ParB-like nuclease domain
J4Z28_RS11770	PF02527	rRNA small subunit methyltransferase G
J4Z28_RS11775	PF01134	Glucose inhibited division protein A
J4Z28_RS11775	PF13932	GidA associated domain
J4Z28_RS11780	PF01926	50S ribosome-binding GTPase
J4Z28_RS11780	PF12631	MnmE helical domain
J4Z28_RS11780	PF10396	GTP-binding protein TrmE N-terminus
J4Z28_RS11785	PF00825	Ribonuclease P
J4Z28_RS11790	PF00468	Ribosomal protein L34
J4Z28_RS11820	PF00005	ABC transporter
J4Z28_RS11835	PF03904	Domain of unknown function (DUF334)
J4Z28_RS11845	PF04463	Protein of unknown function (DUF523)
J4Z28_RS11860	PF00005	ABC transporter
J4Z28_RS11875	PF10502	Signal peptidase, peptidase S26 
