locus-tag	class	description
MUA98_RS00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
MUA98_RS00010	COG0592	DNA-directed DNA polymerase activity
MUA98_RS00015	COG2501	S4 domain
MUA98_RS00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
MUA98_RS00025	COG0187	DNA topoisomerase II activity
MUA98_RS00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MUA98_RS00035	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
MUA98_RS00040	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
MUA98_RS00060	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
MUA98_RS00070	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
MUA98_RS00075	COG0359	binds to the 23S rRNA
MUA98_RS00080	COG0305	Participates in initiation and elongation during chromosome replication
MUA98_RS00085	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
MUA98_RS00100	COG0745	RESPONSE REGULATOR receiver
MUA98_RS00105	COG5002	protein histidine kinase activity
MUA98_RS00110	COG4863	YycH protein
MUA98_RS00120	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
MUA98_RS00125	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
MUA98_RS00140	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
MUA98_RS00160	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUA98_RS00205	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MUA98_RS00210	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MUA98_RS00220	COG2235	arginine
MUA98_RS00260	COG0747	negative chemotaxis
MUA98_RS00270	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUA98_RS00275	COG4172	Belongs to the ABC transporter superfamily
MUA98_RS00280	COG1124	(ABC) transporter
MUA98_RS00330	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
MUA98_RS00335	COG1131	(ABC) transporter
MUA98_RS00350	COG0745	RESPONSE REGULATOR receiver
MUA98_RS00355	COG5002	protein histidine kinase activity
MUA98_RS00370	COG2217	Heavy metal translocating P-type atpase
MUA98_RS00375	COG2132	Multicopper oxidase
MUA98_RS00380	COG1388	LysM domain
MUA98_RS00395	COG1131	(ABC) transporter
MUA98_RS00405	COG1063	alcohol dehydrogenase
MUA98_RS00425	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
MUA98_RS00445	COG0640	Transcriptional regulator
MUA98_RS00450	COG0701	Predicted permease
MUA98_RS00480	COG0668	transmembrane transport
MUA98_RS00520	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
MUA98_RS00525	COG0579	oxidoreductase
MUA98_RS00530	COG1028	Short-chain dehydrogenase reductase Sdr
MUA98_RS00540	COG1755	Isoprenylcysteine carboxyl methyltransferase
MUA98_RS00550	COG2207	Transcriptional regulator
MUA98_RS00550	COG4753	response regulator
MUA98_RS00555	COG2972	Histidine kinase
MUA98_RS00565	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA98_RS00565	COG1215	transferase activity, transferring glycosyl groups
MUA98_RS00590	COG3583	domain protein
MUA98_RS00590	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
MUA98_RS00590	COG4932	domain protein
MUA98_RS00590	COG3583	domain protein
MUA98_RS00590	COG4932	domain protein
MUA98_RS00590	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
MUA98_RS00600	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
MUA98_RS00605	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
MUA98_RS00610	COG0156	8-amino-7-oxononanoate synthase activity
MUA98_RS00615	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
MUA98_RS00645	COG0523	cobalamin synthesis protein
MUA98_RS00670	COG0431	NADPH-dependent FMN reductase
MUA98_RS00670	COG1053	succinate dehydrogenase
MUA98_RS00670	COG3976	FMN-binding domain protein
MUA98_RS00680	COG1028	Short-chain dehydrogenase reductase Sdr
MUA98_RS00685	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
MUA98_RS00715	COG0601	transmembrane transport
MUA98_RS00725	COG0444	Belongs to the ABC transporter superfamily
MUA98_RS00730	COG1124	(ABC) transporter
MUA98_RS00740	COG1882	Formate acetyltransferase
MUA98_RS00745	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
MUA98_RS00750	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA98_RS00755	COG1114	Component of the transport system for branched-chain amino acids
MUA98_RS00760	COG1309	transcriptional regulator
MUA98_RS00765	COG3246	L-lysine catabolic process to acetate
MUA98_RS00770	COG1250	3-hydroxyacyl-CoA dehydrogenase
MUA98_RS00805	COG1288	antiporter activity
MUA98_RS00810	COG0549	Belongs to the carbamate kinase family
MUA98_RS00815	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MUA98_RS00825	COG0346	lactoylglutathione lyase activity
MUA98_RS00830	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
MUA98_RS00835	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
MUA98_RS00845	COG2376	Dihydroxyacetone kinase
MUA98_RS00850	COG1461	Dihydroxyacetone kinase
MUA98_RS00855	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
MUA98_RS00870	COG2814	Major facilitator Superfamily
MUA98_RS00900	COG2814	Major facilitator Superfamily
MUA98_RS00915	COG2962	Rard protein
MUA98_RS00920	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
MUA98_RS00925	COG0471	metal ion transport
MUA98_RS00930	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUA98_RS00935	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MUA98_RS00940	COG0022	dehydrogenase e1 component
MUA98_RS00945	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUA98_RS00970	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
MUA98_RS00975	COG1054	Belongs to the UPF0176 family
MUA98_RS00980	COG3386	PFAM SMP-30 Gluconolaconase
MUA98_RS00990	COG0579	oxidoreductase
MUA98_RS01015	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
MUA98_RS01020	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
MUA98_RS01025	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
MUA98_RS01030	COG0131	Imidazoleglycerol-phosphate dehydratase
MUA98_RS01035	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
MUA98_RS01040	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
MUA98_RS01045	COG0107	imidazoleglycerol-phosphate synthase activity
MUA98_RS01050	COG0140	phosphoribosyl-ATP diphosphatase activity
MUA98_RS01050	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
MUA98_RS01055	COG2162	N-hydroxyarylamine O-acetyltransferase activity
MUA98_RS01060	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
MUA98_RS01075	COG2814	Major facilitator Superfamily
MUA98_RS01080	COG0737	Belongs to the 5'-nucleotidase family
MUA98_RS01095	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
MUA98_RS01100	COG3639	organic phosphonate transmembrane transporter activity
MUA98_RS01120	COG0201	protein transport
MUA98_RS01130	COG1073	alpha beta
MUA98_RS01140	COG0653	protein targeting
MUA98_RS01145	COG0438	transferase activity, transferring glycosyl groups
MUA98_RS01170	COG2814	Major facilitator Superfamily
MUA98_RS01175	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MUA98_RS01190	COG1764	response to oxidative stress
MUA98_RS01200	COG1705	Flagellar rod assembly protein muramidase FlgJ
MUA98_RS01200	COG3942	CHAP domain
MUA98_RS01210	COG1482	cell wall glycoprotein biosynthetic process
MUA98_RS01215	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUA98_RS01215	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUA98_RS01215	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA98_RS01220	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA98_RS01220	COG3711	transcriptional antiterminator
MUA98_RS01255	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA98_RS01260	COG3227	Zinc metalloprotease (Elastase)
MUA98_RS01265	COG1438	arginine binding
MUA98_RS01270	COG2235	arginine
MUA98_RS01275	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
MUA98_RS01285	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
MUA98_RS01295	COG2843	Capsule synthesis protein
MUA98_RS01300	COG3961	Belongs to the TPP enzyme family
MUA98_RS01335	COG0659	secondary active sulfate transmembrane transporter activity
MUA98_RS01360	COG0583	DNA-binding transcription factor activity
MUA98_RS01405	COG0640	Transcriptional regulator
MUA98_RS01440	COG1397	ADP-ribosylglycohydrolase
MUA98_RS01480	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA98_RS01485	COG0702	epimerase
MUA98_RS01490	COG1785	Belongs to the alkaline phosphatase family
MUA98_RS01505	COG2205	protein histidine kinase activity
MUA98_RS01510	COG1136	(ABC) transporter
MUA98_RS01525	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUA98_RS01550	COG1846	Transcriptional regulator
MUA98_RS01560	COG0386	Belongs to the glutathione peroxidase family
MUA98_RS01570	COG0175	sulfate reduction
MUA98_RS01575	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
MUA98_RS01580	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MUA98_RS01595	COG0730	response to heat
MUA98_RS01600	COG2046	Belongs to the sulfate adenylyltransferase family
MUA98_RS01605	COG0529	Catalyzes the synthesis of activated sulfate
MUA98_RS01615	COG1328	CTP reductase activity
MUA98_RS01620	COG0602	queuosine metabolic process
MUA98_RS01625	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
MUA98_RS01635	COG1510	regulation of RNA biosynthetic process
MUA98_RS01640	COG1012	belongs to the aldehyde dehydrogenase family
MUA98_RS01645	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
MUA98_RS01650	COG1473	amidohydrolase
MUA98_RS01665	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
MUA98_RS01670	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MUA98_RS01670	COG0574	Belongs to the PEP-utilizing enzyme family
MUA98_RS01675	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
MUA98_RS01680	COG0579	oxidoreductase
MUA98_RS01690	COG3588	fructose-bisphosphate aldolase
MUA98_RS01695	COG0446	pyridine nucleotide-disulphide oxidoreductase
MUA98_RS01725	COG0531	amino acid
MUA98_RS01730	COG0583	DNA-binding transcription factor activity
MUA98_RS01735	COG0039	L-malate dehydrogenase activity
MUA98_RS01740	COG0028	Belongs to the TPP enzyme family
MUA98_RS01745	COG3527	Alpha-acetolactate decarboxylase
MUA98_RS01755	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
MUA98_RS01760	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
MUA98_RS01765	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
MUA98_RS01780	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
MUA98_RS01795	COG0167	dihydroorotate dehydrogenase activity
MUA98_RS01800	COG3001	Fructosamine kinase
MUA98_RS01805	COG1113	amino acid transport
MUA98_RS01820	COG0741	lytic transglycosylase activity
MUA98_RS01830	COG3942	CHAP domain
MUA98_RS01835	COG0436	Aminotransferase
MUA98_RS01845	COG2608	mercury ion transmembrane transporter activity
MUA98_RS01850	COG2217	Heavy metal translocating P-type atpase
MUA98_RS01860	COG1028	Short-chain dehydrogenase reductase Sdr
MUA98_RS01865	COG1012	belongs to the aldehyde dehydrogenase family
MUA98_RS01890	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
MUA98_RS01895	COG3425	synthase
MUA98_RS01915	COG0583	DNA-binding transcription factor activity
MUA98_RS01920	COG1380	Effector of murein hydrolase LrgA
MUA98_RS01925	COG1346	cytolysis
MUA98_RS01930	COG0028	Belongs to the TPP enzyme family
MUA98_RS01935	COG1263	PTS System
MUA98_RS01935	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA98_RS01935	COG2190	(PTS) system
MUA98_RS01945	COG1063	alcohol dehydrogenase
MUA98_RS01955	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUA98_RS01970	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MUA98_RS01980	COG2843	Capsule synthesis protein
MUA98_RS01995	COG4975	Glucose uptake
MUA98_RS02000	COG1869	D-ribose catabolic process
MUA98_RS02010	COG1070	Carbohydrate kinase
MUA98_RS02025	COG1760	l-serine dehydratase
MUA98_RS02030	COG1760	l-serine dehydratase
MUA98_RS02045	COG1247	-acetyltransferase
MUA98_RS02050	COG3764	Sortase (surface protein transpeptidase)
MUA98_RS02060	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA98_RS02065	COG0778	Nitroreductase
MUA98_RS02070	COG1012	belongs to the aldehyde dehydrogenase family
MUA98_RS02080	COG2514	catechol 2,3-dioxygenase activity
MUA98_RS02095	COG1012	belongs to the aldehyde dehydrogenase family
MUA98_RS02100	COG3949	Membrane
MUA98_RS02110	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
MUA98_RS02115	COG0586	Pfam SNARE associated Golgi protein
MUA98_RS02120	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
MUA98_RS02125	COG2022	thiamine diphosphate biosynthetic process
MUA98_RS02135	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
MUA98_RS02145	COG2271	Major facilitator Superfamily
MUA98_RS02165	COG2357	RelA SpoT domain protein
MUA98_RS02180	COG0789	Transcriptional regulator
MUA98_RS02185	COG2271	Major facilitator Superfamily
MUA98_RS02190	COG1802	Transcriptional regulator
MUA98_RS02200	COG2610	gluconate transmembrane transporter activity
MUA98_RS02205	COG1210	Utp--glucose-1-phosphate uridylyltransferase
MUA98_RS02210	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MUA98_RS02215	COG0438	transferase activity, transferring glycosyl groups
MUA98_RS02220	COG0494	nUDIX hydrolase
MUA98_RS02225	COG0556	nucleotide-excision repair
MUA98_RS02240	COG4221	oxidoreductase activity
MUA98_RS02245	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA98_RS02250	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
MUA98_RS02260	COG1028	Short-chain dehydrogenase reductase Sdr
MUA98_RS02270	COG1363	Peptidase, m42
MUA98_RS02280	COG0069	glutamate synthase activity
MUA98_RS02295	COG4619	ABC transporter
MUA98_RS02300	COG0390	transport system, permease component
MUA98_RS02305	COG2814	Major facilitator Superfamily
MUA98_RS02310	COG2272	Belongs to the type-B carboxylesterase lipase family
MUA98_RS02315	COG0531	amino acid
MUA98_RS02325	COG1063	alcohol dehydrogenase
MUA98_RS02345	COG1174	glycine betaine transport
MUA98_RS02350	COG1346	cytolysis
MUA98_RS02355	COG1380	Effector of murein hydrolase LrgA
MUA98_RS02360	COG3279	Response regulator of the LytR AlgR family
MUA98_RS02365	COG3275	phosphorelay sensor kinase activity
MUA98_RS02375	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
MUA98_RS02380	COG0706	membrane insertase activity
MUA98_RS02390	COG0531	amino acid
MUA98_RS02395	COG1113	amino acid transport
MUA98_RS02420	COG1929	Belongs to the glycerate kinase type-1 family
MUA98_RS02435	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
MUA98_RS02440	COG0588	phosphoglycerate mutase activity
MUA98_RS02450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
MUA98_RS02455	COG0765	amino acid transport
MUA98_RS02460	COG1126	abc transporter atp-binding protein
MUA98_RS02470	COG2348	transferase activity, transferring amino-acyl groups
MUA98_RS02490	COG2116	formate transmembrane transporter activity
MUA98_RS02495	COG0454	-acetyltransferase
MUA98_RS02505	COG0747	negative chemotaxis
MUA98_RS02515	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
MUA98_RS02520	COG2146	nitrite reductase [NAD(P)H] activity
MUA98_RS02530	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
MUA98_RS02535	COG1140	nitrate reductase beta subunit
MUA98_RS02545	COG2181	nitrate reductase activity
MUA98_RS02555	COG4585	Histidine kinase
MUA98_RS02560	COG2197	response regulator
MUA98_RS02565	COG2223	nitrite transmembrane transporter activity
MUA98_RS02570	COG1846	Transcriptional regulator
MUA98_RS02575	COG0778	Nitroreductase
MUA98_RS02595	COG3871	stress protein (general stress protein 26)
MUA98_RS02610	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA98_RS02610	COG1263	PTS System
MUA98_RS02650	COG0604	alcohol dehydrogenase
MUA98_RS02655	COG0456	acetyltransferase
MUA98_RS02660	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA98_RS02660	COG0463	Glycosyl transferase, family 2
MUA98_RS02670	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA98_RS02670	COG0463	Glycosyl transferase, family 2
MUA98_RS02675	COG1620	l-lactate permease
MUA98_RS02680	COG0438	transferase activity, transferring glycosyl groups
MUA98_RS02685	COG0579	oxidoreductase
MUA98_RS02690	COG3850	Histidine kinase
MUA98_RS02690	COG5002	protein histidine kinase activity
MUA98_RS02695	COG0745	RESPONSE REGULATOR receiver
MUA98_RS02700	COG0577	efflux transmembrane transporter activity
MUA98_RS02705	COG1136	(ABC) transporter
MUA98_RS02720	COG4640	response to antibiotic
MUA98_RS02725	COG2814	Major facilitator Superfamily
MUA98_RS02735	COG1566	PFAM secretion protein HlyD family protein
MUA98_RS02740	COG2814	Major facilitator Superfamily
MUA98_RS02750	COG0657	acetylesterase activity
MUA98_RS02765	COG0598	Magnesium transport protein CorA
MUA98_RS02770	COG1304	FMN binding
MUA98_RS02775	COG0786	glutamate:sodium symporter activity
MUA98_RS02795	COG2094	Belongs to the DNA glycosylase MPG family
MUA98_RS02805	COG1069	ribulokinase activity
MUA98_RS02810	COG2017	converts alpha-aldose to the beta-anomer
MUA98_RS02815	COG2258	MOSC domain
MUA98_RS02820	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
MUA98_RS02830	COG1266	CAAX protease self-immunity
MUA98_RS02835	COG0010	Belongs to the arginase family
MUA98_RS02840	COG1473	amidohydrolase
MUA98_RS02845	COG1028	Short-chain dehydrogenase reductase Sdr
MUA98_RS02850	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
MUA98_RS02875	COG1737	Transcriptional regulator
MUA98_RS02880	COG1263	PTS System
MUA98_RS02880	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA98_RS02890	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
MUA98_RS02910	COG1113	amino acid transport
MUA98_RS02920	COG1263	PTS System
MUA98_RS02920	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA98_RS02925	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
MUA98_RS02940	COG1266	CAAX protease self-immunity
MUA98_RS02945	COG2378	regulation of single-species biofilm formation
MUA98_RS02950	COG0483	inositol monophosphate 1-phosphatase activity
MUA98_RS02955	COG1316	TRANSCRIPTIONal
MUA98_RS02975	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA98_RS02980	COG2076	Multidrug Resistance protein
MUA98_RS02985	COG2076	Multidrug Resistance protein
MUA98_RS02990	COG3942	CHAP domain
MUA98_RS03005	COG1757	Na H antiporter
MUA98_RS03010	COG3942	CHAP domain
MUA98_RS03035	COG0829	nickel cation binding
MUA98_RS03040	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
MUA98_RS03045	COG0830	nickel cation binding
MUA98_RS03050	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
MUA98_RS03055	COG0804	urea catabolic process
MUA98_RS03060	COG0832	Belongs to the urease beta subunit family
MUA98_RS03065	COG0831	urea catabolic process
MUA98_RS03075	COG1960	acyl-CoA dehydrogenase activity
MUA98_RS03080	COG1957	nucleoside hydrolase
MUA98_RS03085	COG1268	BioY protein
MUA98_RS03100	COG0725	ABC transporter, periplasmic molybdate-binding protein
MUA98_RS03105	COG4149	molybdate abc transporter
MUA98_RS03110	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
MUA98_RS03115	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
MUA98_RS03120	COG0521	Mo-molybdopterin cofactor biosynthetic process
MUA98_RS03125	COG0315	cyclic pyranopterin monophosphate synthase activity
MUA98_RS03130	COG0303	'Molybdopterin
MUA98_RS03140	COG0314	molybdopterin synthase activity
MUA98_RS03150	COG0746	molybdenum cofactor guanylyltransferase activity
MUA98_RS03155	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
MUA98_RS03200	COG2348	transferase activity, transferring amino-acyl groups
MUA98_RS03205	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
MUA98_RS03225	COG1028	Short-chain dehydrogenase reductase Sdr
MUA98_RS03230	COG4975	Glucose uptake
MUA98_RS03235	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
MUA98_RS03235	COG0551	DNA topoisomerase type I activity
MUA98_RS03240	COG2252	PERMEase
MUA98_RS03255	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
MUA98_RS03260	COG0088	Forms part of the polypeptide exit tunnel
MUA98_RS03265	COG0089	rRNA binding
MUA98_RS03270	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
MUA98_RS03275	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
MUA98_RS03280	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
MUA98_RS03285	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
MUA98_RS03290	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
MUA98_RS03300	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
MUA98_RS03305	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
MUA98_RS03310	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
MUA98_RS03315	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
MUA98_RS03320	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MUA98_RS03325	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
MUA98_RS03330	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
MUA98_RS03335	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
MUA98_RS03340	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
MUA98_RS03345	COG1841	ribosomal large subunit assembly
MUA98_RS03350	COG0200	Binds to the 23S rRNA
MUA98_RS03355	COG0201	protein transport
MUA98_RS03360	COG0563	adenylate kinase activity
MUA98_RS03365	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
MUA98_RS03370	COG0257	Belongs to the bacterial ribosomal protein bL36 family
MUA98_RS03375	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
MUA98_RS03380	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
MUA98_RS03385	COG0202	RNA polymerase activity
MUA98_RS03390	COG0203	ribosomal protein L17
MUA98_RS03395	COG1122	ATPase activity
MUA98_RS03400	COG1122	ATPase activity
MUA98_RS03410	COG0101	tRNA pseudouridine synthase activity
MUA98_RS03415	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
MUA98_RS03420	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
MUA98_RS03425	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
MUA98_RS03430	COG1349	DNA-binding transcription factor activity
MUA98_RS03435	COG0698	ribose 5-phosphate isomerase
MUA98_RS03440	COG0698	ribose 5-phosphate isomerase
MUA98_RS03445	COG1105	Belongs to the carbohydrate kinase PfkB family
MUA98_RS03450	COG3684	Belongs to the aldolase LacD family
MUA98_RS03455	COG1447	Phosphotransferase system cellobiose-specific component IIA
MUA98_RS03460	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
MUA98_RS03460	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
MUA98_RS03465	COG2723	6-phospho-beta-galactosidase activity
MUA98_RS03475	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUA98_RS03480	COG2130	NADP-dependent
MUA98_RS03485	COG0604	alcohol dehydrogenase
MUA98_RS03500	COG1302	Protein conserved in bacteria
MUA98_RS03505	COG4264	IucA IucC family
MUA98_RS03510	COG2814	Major facilitator Superfamily
MUA98_RS03515	COG4264	IucA IucC family
MUA98_RS03520	COG3457	Alanine racemase
MUA98_RS03525	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
MUA98_RS03530	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA98_RS03535	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA98_RS03540	COG3314	Sporulation integral membrane protein YlbJ
MUA98_RS03545	COG2329	Antibiotic biosynthesis monooxygenase
MUA98_RS03555	COG1988	membrane-bound metal-dependent
MUA98_RS03560	COG4284	Utp--glucose-1-phosphate uridylyltransferase
MUA98_RS03580	COG2814	Major facilitator Superfamily
MUA98_RS03585	COG0489	protein tyrosine kinase activity
MUA98_RS03635	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
MUA98_RS03645	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
MUA98_RS03650	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
MUA98_RS03655	COG0561	phosphatase activity
MUA98_RS03675	COG0640	Transcriptional regulator
MUA98_RS03680	COG0702	epimerase
MUA98_RS03685	COG1482	cell wall glycoprotein biosynthetic process
MUA98_RS03705	COG0783	Belongs to the Dps family
MUA98_RS03710	COG0813	purine-nucleoside phosphorylase activity
MUA98_RS03715	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
MUA98_RS03720	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
MUA98_RS03725	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
MUA98_RS03735	COG1854	S-ribosylhomocysteine lyase activity
MUA98_RS03755	COG5146	pantothenate kinase activity
MUA98_RS03765	COG3343	RNA polymerase activity
MUA98_RS03770	COG0504	CTP synthase activity
MUA98_RS03780	COG0191	fructose-bisphosphate aldolase activity
MUA98_RS03785	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MUA98_RS03790	COG1012	belongs to the aldehyde dehydrogenase family
MUA98_RS03795	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
MUA98_RS03800	COG0254	rRNA binding
MUA98_RS03805	COG1435	thymidine kinase activity
MUA98_RS03810	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
MUA98_RS03815	COG2890	protein-(glutamine-N5) methyltransferase activity
MUA98_RS03820	COG0009	L-threonylcarbamoyladenylate synthase
MUA98_RS03825	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MUA98_RS03830	COG4475	Protein of unknown function (DUF436)
MUA98_RS03835	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
MUA98_RS03840	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
MUA98_RS03845	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
MUA98_RS03855	COG0356	it plays a direct role in the translocation of protons across the membrane
MUA98_RS03865	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
MUA98_RS03870	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
MUA98_RS03875	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
MUA98_RS03880	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
MUA98_RS03885	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
MUA98_RS03890	COG0355	proton-transporting ATP synthase activity, rotational mechanism
MUA98_RS03900	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
MUA98_RS03905	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
MUA98_RS03915	COG0629	single-stranded DNA binding
MUA98_RS03920	COG1388	LysM domain
MUA98_RS03925	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
MUA98_RS03935	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
MUA98_RS03940	COG0352	thiamine-phosphate diphosphorylase activity
MUA98_RS03945	COG0706	membrane insertase activity
MUA98_RS03950	COG1418	mRNA catabolic process
MUA98_RS03955	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MUA98_RS03960	COG1937	Protein conserved in bacteria
MUA98_RS03975	COG0772	Belongs to the SEDS family
MUA98_RS03980	COG1181	Belongs to the D-alanine--D-alanine ligase family
MUA98_RS03985	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
MUA98_RS03990	COG0513	Belongs to the DEAD box helicase family
MUA98_RS04000	COG3428	Bacterial PH domain
MUA98_RS04005	COG3402	PFAM membrane-flanked domain
MUA98_RS04010	COG0736	holo-[acyl-carrier-protein] synthase activity
MUA98_RS04015	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
MUA98_RS04025	COG2337	Toxic component of a toxin-antitoxin (TA) module
MUA98_RS04030	COG2208	phosphoserine phosphatase activity
MUA98_RS04045	COG1191	sigma factor activity
MUA98_RS04050	COG2183	response to ionizing radiation
MUA98_RS04055	COG3091	SprT-like family
MUA98_RS04085	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
MUA98_RS04090	COG0066	3-isopropylmalate dehydratase activity
MUA98_RS04095	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
MUA98_RS04100	COG0473	3-isopropylmalate dehydrogenase activity
MUA98_RS04105	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
MUA98_RS04110	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
MUA98_RS04120	COG0028	Belongs to the TPP enzyme family
MUA98_RS04125	COG0129	dihydroxy-acid dehydratase activity
MUA98_RS04130	COG0802	atpase or kinase
MUA98_RS04135	COG1214	PFAM Peptidase M22, glycoprotease
MUA98_RS04140	COG0456	acetyltransferase
MUA98_RS04145	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
MUA98_RS04150	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
MUA98_RS04155	COG0488	(ABC) transporter
MUA98_RS04160	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
MUA98_RS04170	COG2391	methyltransferase activity
MUA98_RS04175	COG0425	Belongs to the sulfur carrier protein TusA family
MUA98_RS04180	COG0004	ammonium transporteR
MUA98_RS04185	COG1609	Transcriptional regulator
MUA98_RS04190	COG1621	beta-fructofuranosidase activity
MUA98_RS04195	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
MUA98_RS04200	COG3279	Response regulator of the LytR AlgR family
MUA98_RS04205	COG3290	protein histidine kinase activity
MUA98_RS04240	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
MUA98_RS04245	COG0459	protein refolding
MUA98_RS04270	COG1725	Transcriptional regulator
MUA98_RS04275	COG1131	(ABC) transporter
MUA98_RS04285	COG1131	(ABC) transporter
MUA98_RS04335	COG4974	Belongs to the 'phage' integrase family
MUA98_RS04365	COG3682	Transcriptional regulator
MUA98_RS04375	COG2706	6-phosphogluconolactonase activity
MUA98_RS04380	COG1012	belongs to the aldehyde dehydrogenase family
MUA98_RS04385	COG1227	inorganic diphosphatase activity
MUA98_RS04390	COG1335	isochorismatase
MUA98_RS04400	COG0077	Prephenate dehydratase
MUA98_RS04410	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
MUA98_RS04415	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
MUA98_RS04420	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
MUA98_RS04430	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
MUA98_RS04435	COG4496	protein, YerC YecD
MUA98_RS04440	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
MUA98_RS04445	COG0210	DNA helicase
MUA98_RS04450	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
MUA98_RS04455	COG4851	CamS sex pheromone cAM373 precursor
MUA98_RS04460	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
MUA98_RS04465	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MUA98_RS04470	COG0154	amidase activity
MUA98_RS04475	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
MUA98_RS04480	COG1597	lipid kinase activity
MUA98_RS04485	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
MUA98_RS04495	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MUA98_RS04505	COG1528	Iron-storage protein
MUA98_RS04525	COG4129	membrane
MUA98_RS04530	COG0024	Methionine aminopeptidase
MUA98_RS04545	COG4585	Histidine kinase
MUA98_RS04550	COG2197	response regulator
MUA98_RS04555	COG1295	ribonuclease BN
MUA98_RS04565	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
MUA98_RS04570	COG4840	Belongs to the UPF0435 family
MUA98_RS04575	COG2309	aminopeptidase activity
MUA98_RS04580	COG1607	acyl-coa hydrolase
MUA98_RS04585	COG0535	radical SAM domain protein
MUA98_RS04595	COG0693	protein deglycase activity
MUA98_RS04600	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUA98_RS04605	COG2137	regulation of response to DNA damage stimulus
MUA98_RS04615	COG1388	LysM domain
MUA98_RS04615	COG1134	teichoic acid transport
MUA98_RS04625	COG1988	membrane-bound metal-dependent
MUA98_RS04635	COG3557	Belongs to the UPF0374 family
MUA98_RS04645	COG4129	membrane
MUA98_RS04650	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
MUA98_RS04655	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
MUA98_RS04660	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA98_RS04665	COG0735	belongs to the Fur family
MUA98_RS04835	COG0765	amino acid transport
MUA98_RS04840	COG1126	abc transporter atp-binding protein
MUA98_RS04850	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
MUA98_RS04875	COG0114	fumarate hydratase activity
MUA98_RS04880	COG0564	pseudouridine synthase activity
MUA98_RS04885	COG4585	Histidine kinase
MUA98_RS04885	COG2203	Gaf domain
MUA98_RS04890	COG2197	response regulator
MUA98_RS04900	COG4399	Belongs to the UPF0754 family
MUA98_RS04905	COG3679	Belongs to the UPF0342 family
MUA98_RS04910	COG0420	3'-5' exonuclease activity
MUA98_RS04920	COG3481	metal-dependent phosphohydrolase, HD sub domain
MUA98_RS04930	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
MUA98_RS04945	COG0537	adenosine 5'-monophosphoramidase activity
MUA98_RS04950	COG1131	(ABC) transporter
MUA98_RS04955	COG4473	ABC transporter
MUA98_RS04965	COG2329	Antibiotic biosynthesis monooxygenase
MUA98_RS04970	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
MUA98_RS04975	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
MUA98_RS04980	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
MUA98_RS05055	COG0318	PFAM AMP-dependent synthetase and ligase
MUA98_RS05065	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
MUA98_RS05070	COG0494	nUDIX hydrolase
MUA98_RS05075	COG1506	peptidase
MUA98_RS05080	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
MUA98_RS05085	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
MUA98_RS05095	COG0656	L-ascorbic acid biosynthetic process
MUA98_RS05110	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MUA98_RS05115	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
MUA98_RS05125	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
MUA98_RS05150	COG5632	N-Acetylmuramoyl-L-alanine amidase
MUA98_RS05150	COG4193	domain, Protein
MUA98_RS05150	COG3266	domain, Protein
MUA98_RS05160	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MUA98_RS05160	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
MUA98_RS05170	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
MUA98_RS05170	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
MUA98_RS05175	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
MUA98_RS05180	COG0506	proline dehydrogenase activity
MUA98_RS05185	COG2267	carboxylic ester hydrolase activity
MUA98_RS05195	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
MUA98_RS05200	COG1242	4 iron, 4 sulfur cluster binding
MUA98_RS05205	COG2814	Major facilitator Superfamily
MUA98_RS05210	COG0495	leucyl-tRNA aminoacylation
MUA98_RS05225	COG2081	HI0933 family
MUA98_RS05230	COG2244	polysaccharide biosynthetic process
MUA98_RS05235	COG1187	pseudouridine synthase activity
MUA98_RS05245	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
MUA98_RS05250	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MUA98_RS05255	COG0510	thiamine kinase activity
MUA98_RS05260	COG0220	tRNA (guanine-N7-)-methyltransferase activity
MUA98_RS05270	COG1363	Peptidase, m42
MUA98_RS05275	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUA98_RS05280	COG4848	Belongs to the UPF0354 family
MUA98_RS05285	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUA98_RS05290	COG1674	ftsk spoiiie
MUA98_RS05295	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
MUA98_RS05300	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
MUA98_RS05310	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
MUA98_RS05310	COG1605	Chorismate mutase
MUA98_RS05315	COG1609	Transcriptional regulator
MUA98_RS05320	COG2759	Belongs to the formate--tetrahydrofolate ligase family
MUA98_RS05330	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
MUA98_RS05335	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MUA98_RS05340	COG0204	Acyl-transferase
MUA98_RS05345	COG1263	PTS System
MUA98_RS05345	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
MUA98_RS05355	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
MUA98_RS05360	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
MUA98_RS05365	COG1764	response to oxidative stress
MUA98_RS05370	COG0584	glycerophosphoryl diester phosphodiesterase
MUA98_RS05375	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
MUA98_RS05380	COG1956	GAF domain-containing protein
MUA98_RS05385	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
MUA98_RS05395	COG0301	tRNA thio-modification
MUA98_RS05405	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
MUA98_RS05410	COG0827	DNA restriction-modification system
MUA98_RS05415	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
MUA98_RS05425	COG0589	response to stress
MUA98_RS05430	COG0686	Belongs to the AlaDH PNT family
MUA98_RS05435	COG0006	proline dipeptidase activity
MUA98_RS05440	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
MUA98_RS05450	COG4109	DRTGG domain
MUA98_RS05455	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
MUA98_RS05460	COG0587	DNA-directed DNA polymerase activity
MUA98_RS05465	COG0281	malic enzyme
MUA98_RS05470	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
MUA98_RS05475	COG0825	malonyl-CoA metabolic process
MUA98_RS05480	COG0205	6-phosphofructokinase activity
MUA98_RS05485	COG0469	pyruvate kinase activity
MUA98_RS05490	COG1113	amino acid transport
MUA98_RS05495	COG0372	Belongs to the citrate synthase family
MUA98_RS05500	COG0538	isocitrate dehydrogenase activity
MUA98_RS05505	COG0745	RESPONSE REGULATOR receiver
MUA98_RS05510	COG5002	protein histidine kinase activity
MUA98_RS05515	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUA98_RS05515	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUA98_RS05520	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
MUA98_RS05525	COG0237	dephospho-CoA kinase activity
MUA98_RS05535	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
MUA98_RS05540	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
MUA98_RS05545	COG3611	Membrane attachment protein
MUA98_RS05550	COG1484	DNA-dependent DNA replication
MUA98_RS05555	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
MUA98_RS05560	COG0833	amino acid
MUA98_RS05565	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
MUA98_RS05570	COG0291	Belongs to the bacterial ribosomal protein bL35 family
MUA98_RS05575	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
MUA98_RS05580	COG4112	unkown
MUA98_RS05590	COG0544	peptidyl-prolyl cis-trans isomerase activity
MUA98_RS05595	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
MUA98_RS05600	COG0218	Necessary for normal cell division and for the maintenance of normal septation
MUA98_RS05605	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
MUA98_RS05615	COG0181	hydroxymethylbilane synthase activity
MUA98_RS05625	COG0113	porphobilinogen synthase activity
MUA98_RS05630	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
MUA98_RS05645	COG2818	Glycosylase
MUA98_RS05650	COG0525	valine-tRNA ligase activity
MUA98_RS05655	COG0285	dihydrofolate synthase activity
MUA98_RS05665	COG2003	Belongs to the UPF0758 family
MUA98_RS05695	COG0261	This protein binds to 23S rRNA in the presence of protein L20
MUA98_RS05700	COG2868	ribosomal protein
MUA98_RS05705	COG0211	Belongs to the bacterial ribosomal protein bL27 family
MUA98_RS05710	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
MUA98_RS05715	COG4492	Belongs to the UPF0735 family
MUA98_RS05720	COG0632	four-way junction helicase activity
MUA98_RS05725	COG2255	four-way junction helicase activity
MUA98_RS05730	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
MUA98_RS05735	COG0343	queuine tRNA-ribosyltransferase activity
MUA98_RS05740	COG1862	Preprotein translocase
MUA98_RS05745	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MUA98_RS05745	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
MUA98_RS05750	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
MUA98_RS05750	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
MUA98_RS05755	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUA98_RS05760	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
MUA98_RS05765	COG1490	D-aminoacyl-tRNA deacylase activity
MUA98_RS05770	COG0860	N-Acetylmuramoyl-L-alanine amidase
MUA98_RS05775	COG0124	histidyl-tRNA synthetase
MUA98_RS05780	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
MUA98_RS05790	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
MUA98_RS05795	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
MUA98_RS05800	COG1959	2 iron, 2 sulfur cluster binding
MUA98_RS05810	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUA98_RS05815	COG1104	cysteine desulfurase activity
MUA98_RS05820	COG0482	sulfurtransferase activity
MUA98_RS05830	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
MUA98_RS05835	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
MUA98_RS05840	COG4472	Bacterial protein of unknown function (DUF965)
MUA98_RS05845	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
MUA98_RS05850	COG3906	Belongs to the UPF0473 family
MUA98_RS05860	COG0826	peptidase U32
MUA98_RS05865	COG0826	peptidase U32
MUA98_RS05870	COG0572	uridine kinase
MUA98_RS05875	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
MUA98_RS05885	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
MUA98_RS05890	COG1984	allophanate hydrolase subunit 2
MUA98_RS05895	COG0511	ligase activity, forming carbon-carbon bonds
MUA98_RS05900	COG0439	Biotin carboxylase
MUA98_RS05905	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
MUA98_RS05910	COG1914	H( )-stimulated, divalent metal cation uptake system
MUA98_RS05915	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
MUA98_RS05920	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
MUA98_RS05925	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
MUA98_RS05930	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
MUA98_RS05935	COG1534	Rna-binding protein
MUA98_RS05940	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
MUA98_RS05945	COG1713	HD superfamily hydrolase involved in NAD metabolism
MUA98_RS05950	COG0799	negative regulation of ribosome biogenesis
MUA98_RS05955	COG2226	methyltransferase
MUA98_RS05965	COG2131	deaminase
MUA98_RS05970	COG0658	competence protein
MUA98_RS05970	COG2333	competence protein COMEC
MUA98_RS05975	COG1466	dna polymerase III delta subunit
MUA98_RS05980	COG0268	Binds directly to 16S ribosomal RNA
MUA98_RS05985	COG0481	GTPase activity
MUA98_RS05990	COG0635	Involved in the biosynthesis of porphyrin-containing compound
MUA98_RS05995	COG1420	regulation of RNA biosynthetic process
MUA98_RS06000	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
MUA98_RS06005	COG0443	Heat shock 70 kDa protein
MUA98_RS06010	COG0484	heat shock protein binding
MUA98_RS06015	COG2264	protein methyltransferase activity
MUA98_RS06020	COG1385	rRNA (uridine-N3-)-methyltransferase activity
MUA98_RS06025	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
MUA98_RS06035	COG1030	water channel activity
MUA98_RS06040	COG4864	UPF0365 protein
MUA98_RS06050	COG1702	phosphate starvation-inducible protein PhoH
MUA98_RS06055	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
MUA98_RS06060	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
MUA98_RS06065	COG0295	cytidine deaminase activity
MUA98_RS06070	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
MUA98_RS06075	COG1381	Involved in DNA repair and RecF pathway recombination
MUA98_RS06080	COG0423	glycine-tRNA ligase activity
MUA98_RS06085	COG0517	IMP dehydrogenase activity
MUA98_RS06090	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
MUA98_RS06095	COG0358	DNA primase activity
MUA98_RS06100	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
MUA98_RS06105	COG2384	SAM-dependent methyltransferase
MUA98_RS06110	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
MUA98_RS06115	COG0513	Belongs to the DEAD box helicase family
MUA98_RS06120	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
MUA98_RS06125	COG1121	(ABC) transporter
MUA98_RS06130	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MUA98_RS06135	COG0735	belongs to the Fur family
MUA98_RS06140	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
MUA98_RS06145	COG0768	penicillin binding
MUA98_RS06150	COG0267	Belongs to the bacterial ribosomal protein bL33 family
MUA98_RS06155	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
MUA98_RS06165	COG4483	Protein conserved in bacteria
MUA98_RS06170	COG1940	carbohydrate kinase activity
MUA98_RS06175	COG0011	TIGRFAM Protein of
MUA98_RS06185	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
MUA98_RS06190	COG1459	type II secretion system
MUA98_RS06195	COG4537	Required for transformation and DNA binding
MUA98_RS06215	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
MUA98_RS06220	COG0404	The glycine cleavage system catalyzes the degradation of glycine
MUA98_RS06225	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
MUA98_RS06230	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
MUA98_RS06240	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
MUA98_RS06245	COG0095	Lipoate-protein ligase
MUA98_RS06260	COG0006	proline dipeptidase activity
MUA98_RS06265	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
MUA98_RS06270	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
MUA98_RS06275	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
MUA98_RS06280	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
MUA98_RS06285	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MUA98_RS06290	COG0511	ligase activity, forming carbon-carbon bonds
MUA98_RS06295	COG0439	Biotin carboxylase
MUA98_RS06300	COG1302	Protein conserved in bacteria
MUA98_RS06305	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MUA98_RS06310	COG1570	exodeoxyribonuclease VII activity
MUA98_RS06315	COG1722	exodeoxyribonuclease VII activity
MUA98_RS06325	COG1438	arginine binding
MUA98_RS06330	COG0497	DNA recombination
MUA98_RS06335	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUA98_RS06340	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MUA98_RS06345	COG0022	dehydrogenase e1 component
MUA98_RS06350	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUA98_RS06360	COG4129	membrane
MUA98_RS06370	COG2195	Cleaves the N-terminal amino acid of tripeptides
MUA98_RS06375	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
MUA98_RS06380	COG0366	Alpha amylase catalytic
MUA98_RS06390	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MUA98_RS06395	COG1234	tRNA 3'-trailer cleavage
MUA98_RS06400	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
MUA98_RS06405	COG1028	Short-chain dehydrogenase reductase Sdr
MUA98_RS06410	COG0667	Aldo Keto reductase
MUA98_RS06415	COG0494	nUDIX hydrolase
MUA98_RS06420	COG0735	belongs to the Fur family
MUA98_RS06425	COG4974	Belongs to the 'phage' integrase family
MUA98_RS06430	COG1547	Domain of unknown function (DUF309)
MUA98_RS06435	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
MUA98_RS06440	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
MUA98_RS06445	COG1187	pseudouridine synthase activity
MUA98_RS06450	COG0745	RESPONSE REGULATOR receiver
MUA98_RS06465	COG1141	Ferredoxin
MUA98_RS06475	COG0514	ATP-dependent DNA helicase (RecQ)
MUA98_RS06480	COG1388	LysM domain
MUA98_RS06485	COG0492	ferredoxin-NADP+ reductase activity
MUA98_RS06490	COG0252	asparaginase activity
MUA98_RS06495	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
MUA98_RS06500	COG0539	negative regulation of cytoplasmic translation
MUA98_RS06505	COG1160	GTP binding
MUA98_RS06510	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
MUA98_RS06525	COG2226	methyltransferase
MUA98_RS06535	COG0105	UTP biosynthetic process
MUA98_RS06540	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
MUA98_RS06545	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
MUA98_RS06550	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
MUA98_RS06560	COG5582	Belongs to the UPF0302 family
MUA98_RS06565	COG4347	Protein of unknown function (DUF1405)
MUA98_RS06570	COG2738	Putative neutral zinc metallopeptidase
MUA98_RS06575	COG1694	Mazg nucleotide pyrophosphohydrolase
MUA98_RS06580	COG0438	transferase activity, transferring glycosyl groups
MUA98_RS06585	COG0617	tRNA 3'-terminal CCA addition
MUA98_RS06590	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
MUA98_RS06590	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
MUA98_RS06595	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
MUA98_RS06595	COG1199	ATP-dependent helicase activity
MUA98_RS06600	COG0017	Asparaginyl-tRNA synthetase
MUA98_RS06605	COG3935	DnaD domain protein
MUA98_RS06610	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
MUA98_RS06620	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
MUA98_RS06620	COG4499	WXG100 protein secretion system (Wss), protein YukC
MUA98_RS06625	COG3331	DNA recombination
MUA98_RS06635	COG4474	Belongs to the UPF0398 family
MUA98_RS06640	COG3599	regulation of cell shape
MUA98_RS06650	COG0116	Belongs to the methyltransferase superfamily
MUA98_RS06660	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
MUA98_RS06665	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
MUA98_RS06680	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
MUA98_RS06690	COG1413	lyase activity
MUA98_RS06705	COG1136	(ABC) transporter
MUA98_RS06730	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
MUA98_RS06735	COG2190	(PTS) system
MUA98_RS06740	COG4479	Belongs to the UPF0346 family
MUA98_RS06745	COG0793	Belongs to the peptidase S41A family
MUA98_RS06755	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MUA98_RS06760	COG0671	phosphoesterase, PA-phosphatase related
MUA98_RS06765	COG0745	RESPONSE REGULATOR receiver
MUA98_RS06770	COG5002	protein histidine kinase activity
MUA98_RS06775	COG0567	Dehydrogenase, E1 component
MUA98_RS06780	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUA98_RS06800	COG0714	Associated with various cellular activities
MUA98_RS06805	COG4548	von Willebrand factor, type A
MUA98_RS06810	COG1114	Component of the transport system for branched-chain amino acids
MUA98_RS06815	COG3853	Toxic anion resistance protein (TelA)
MUA98_RS06825	COG1254	Belongs to the acylphosphatase family
MUA98_RS06835	COG1278	Cold shock
MUA98_RS06850	COG1131	(ABC) transporter
MUA98_RS06870	COG1473	amidohydrolase
MUA98_RS06875	COG2171	N-acyltransferase activity
MUA98_RS06880	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
MUA98_RS06885	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
MUA98_RS06890	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
MUA98_RS06895	COG0527	aspartate kinase activity
MUA98_RS06900	COG0488	(ABC) transporter
MUA98_RS06905	COG2996	Protein conserved in bacteria
MUA98_RS06910	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
MUA98_RS06915	COG0573	inorganic phosphate transmembrane transporter activity
MUA98_RS06920	COG0581	inorganic phosphate transmembrane transporter activity
MUA98_RS06925	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
MUA98_RS06930	COG0704	Plays a role in the regulation of phosphate uptake
MUA98_RS06970	COG2348	transferase activity, transferring amino-acyl groups
MUA98_RS06975	COG2348	transferase activity, transferring amino-acyl groups
MUA98_RS06985	COG0159	tryptophan synthase activity
MUA98_RS06990	COG0133	tryptophan synthase activity
MUA98_RS06995	COG0135	phosphoribosylanthranilate isomerase activity
MUA98_RS07000	COG0134	indole-3-glycerol-phosphate synthase activity
MUA98_RS07005	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
MUA98_RS07010	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
MUA98_RS07010	COG0512	Glutamine amidotransferase of anthranilate synthase
MUA98_RS07015	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MUA98_RS07020	COG0287	Prephenate dehydrogenase
MUA98_RS07025	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
MUA98_RS07030	COG1942	4-Oxalocrotonate Tautomerase
MUA98_RS07045	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
MUA98_RS07045	COG0392	lysyltransferase activity
MUA98_RS07050	COG0628	permease
MUA98_RS07055	COG3711	transcriptional antiterminator
MUA98_RS07060	COG1115	amino acid carrier protein
MUA98_RS07065	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
MUA98_RS07070	COG0187	DNA topoisomerase II activity
MUA98_RS07075	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
MUA98_RS07080	COG4841	protein insertion into membrane
MUA98_RS07085	COG0824	Thioesterase
MUA98_RS07095	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
MUA98_RS07100	COG1970	mechanosensitive ion channel activity
MUA98_RS07105	COG0419	ATPase involved in DNA repair
MUA98_RS07110	COG0420	3'-5' exonuclease activity
MUA98_RS07115	COG4846	Membrane protein involved in cytochrome C biogenesis
MUA98_RS07125	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
MUA98_RS07130	COG4224	UPF0291 protein
MUA98_RS07140	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
MUA98_RS07145	COG2340	Cysteine-rich secretory protein family
MUA98_RS07150	COG0516	GMP reductase activity
MUA98_RS07155	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
MUA98_RS07165	COG0753	catalase activity
MUA98_RS07170	COG0833	amino acid
MUA98_RS07185	COG0083	homoserine kinase activity
MUA98_RS07190	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
MUA98_RS07195	COG0460	homoserine dehydrogenase
MUA98_RS07200	COG0527	aspartate kinase activity
MUA98_RS07215	COG1525	nuclease
MUA98_RS07225	COG2197	response regulator
MUA98_RS07230	COG4585	Histidine kinase
MUA98_RS07240	COG1131	(ABC) transporter
MUA98_RS07245	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
MUA98_RS07295	COG0174	glutamine synthetase
MUA98_RS07300	COG0789	Transcriptional regulator
MUA98_RS07305	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
MUA98_RS07310	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
MUA98_RS07315	COG0386	Belongs to the glutathione peroxidase family
MUA98_RS07320	COG1923	regulation of RNA biosynthetic process
MUA98_RS07325	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
MUA98_RS07335	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
MUA98_RS07340	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
MUA98_RS07345	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
MUA98_RS07350	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
MUA98_RS07355	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
MUA98_RS07360	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
MUA98_RS07370	COG4550	Control of competence regulator ComK, YlbF/YmcA
MUA98_RS07375	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
MUA98_RS07385	COG4195	phage-related replication protein
MUA98_RS07390	COG1013	pyruvate-flavodoxin oxidoreductase activity
MUA98_RS07395	COG0674	pyruvate-flavodoxin oxidoreductase activity
MUA98_RS07395	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
MUA98_RS07400	COG1692	metallophosphoesterase
MUA98_RS07410	COG1418	mRNA catabolic process
MUA98_RS07415	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
MUA98_RS07425	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
MUA98_RS07440	COG0300	oxidoreductase activity
MUA98_RS07445	COG0612	Peptidase, M16
MUA98_RS07450	COG0612	Peptidase, M16
MUA98_RS07455	COG2188	Transcriptional regulator
MUA98_RS07460	COG1674	ftsk spoiiie
MUA98_RS07465	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MUA98_RS07470	COG1185	polyribonucleotide nucleotidyltransferase activity
MUA98_RS07475	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
MUA98_RS07480	COG0196	riboflavin kinase activity
MUA98_RS07485	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
MUA98_RS07490	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
MUA98_RS07495	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
MUA98_RS07500	COG1358	cellular component organization or biogenesis
MUA98_RS07505	COG2740	Nucleic-acid-binding protein implicated in transcription termination
MUA98_RS07510	COG0195	Participates in both transcription termination and antitermination
MUA98_RS07515	COG0779	Required for maturation of 30S ribosomal subunits
MUA98_RS07520	COG2176	DNA-directed DNA polymerase activity
MUA98_RS07525	COG0442	prolyl-tRNA aminoacylation
MUA98_RS07535	COG4589	Belongs to the CDS family
MUA98_RS07540	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
MUA98_RS07545	COG0233	cytoplasmic translational termination
MUA98_RS07550	COG0528	UMP kinase activity
MUA98_RS07555	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
MUA98_RS07560	COG0052	Belongs to the universal ribosomal protein uS2 family
MUA98_RS07565	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
MUA98_RS07570	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
MUA98_RS07575	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
MUA98_RS07580	COG4974	Belongs to the 'phage' integrase family
MUA98_RS07585	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
MUA98_RS07590	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
MUA98_RS07595	COG0758	DNA mediated transformation
MUA98_RS07605	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
MUA98_RS07610	COG0045	succinate-CoA ligase (ADP-forming) activity
MUA98_RS07615	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MUA98_RS07625	COG4485	Bacterial membrane protein, YfhO
MUA98_RS07635	COG0335	large ribosomal subunit rRNA binding
MUA98_RS07640	COG0336	Belongs to the RNA methyltransferase TrmD family
MUA98_RS07645	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
MUA98_RS07650	COG0228	four-way junction DNA binding
MUA98_RS07655	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
MUA98_RS07660	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
MUA98_RS07665	COG0552	protein localization to endoplasmic reticulum
MUA98_RS07670	COG1196	nuclear chromosome segregation
MUA98_RS07675	COG0571	ribonuclease III activity
MUA98_RS07680	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUA98_RS07685	COG1028	Short-chain dehydrogenase reductase Sdr
MUA98_RS07695	COG0416	fatty acid biosynthetic process
MUA98_RS07700	COG1349	DNA-binding transcription factor activity
MUA98_RS07705	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
MUA98_RS07710	COG1461	Dihydroxyacetone kinase
MUA98_RS07715	COG1302	Protein conserved in bacteria
MUA98_RS07720	COG0227	Belongs to the bacterial ribosomal protein bL28 family
MUA98_RS07730	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
MUA98_RS07735	COG1162	GTPase activity
MUA98_RS07745	COG0631	protein serine/threonine phosphatase activity
MUA98_RS07750	COG0820	rRNA (adenine-C2-)-methyltransferase activity
MUA98_RS07755	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
MUA98_RS07755	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
MUA98_RS07760	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
MUA98_RS07765	COG0242	peptide deformylase activity
MUA98_RS07775	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
MUA98_RS07780	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
MUA98_RS07785	COG1758	RNA polymerase activity
MUA98_RS07790	COG0194	GDP metabolic process
MUA98_RS07810	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
MUA98_RS07815	COG0284	orotidine-5'-phosphate decarboxylase activity
MUA98_RS07820	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
MUA98_RS07825	COG0505	Belongs to the CarA family
MUA98_RS07830	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
MUA98_RS07835	COG0540	Belongs to the ATCase OTCase family
MUA98_RS07840	COG2233	PERMEase
MUA98_RS07845	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
MUA98_RS07850	COG0564	pseudouridine synthase activity
MUA98_RS07855	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
MUA98_RS07860	COG1388	LysM domain
MUA98_RS07860	COG3942	CHAP domain
MUA98_RS07870	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
MUA98_RS07875	COG3599	regulation of cell shape
MUA98_RS07885	COG0762	integral membrane protein
MUA98_RS07890	COG1799	cell septum assembly
MUA98_RS07895	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
MUA98_RS07900	COG1496	oxidoreductase activity
MUA98_RS07905	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
MUA98_RS07910	COG0849	cell division
MUA98_RS07915	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
MUA98_RS07920	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
MUA98_RS07925	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MUA98_RS07930	COG0768	penicillin binding
MUA98_RS07935	COG4839	cell division protein FtsL
MUA98_RS07940	COG0275	rRNA processing
MUA98_RS07945	COG2001	Belongs to the MraZ family
MUA98_RS07950	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
MUA98_RS07955	COG0454	-acetyltransferase
MUA98_RS07960	COG1011	Hydrolase
MUA98_RS08005	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
MUA98_RS08010	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
MUA98_RS08015	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
MUA98_RS08020	COG1053	succinate dehydrogenase
MUA98_RS08025	COG2009	succinate dehydrogenase
MUA98_RS08035	COG0322	excinuclease ABC activity
MUA98_RS08040	COG3118	belongs to the thioredoxin family
MUA98_RS08045	COG1193	negative regulation of DNA recombination
MUA98_RS08050	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
MUA98_RS08050	COG1796	DNA polymerase
MUA98_RS08060	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
MUA98_RS08065	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
MUA98_RS08075	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUA98_RS08075	COG0072	phenylalanine-tRNA ligase activity
MUA98_RS08080	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
MUA98_RS08085	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUA98_RS08095	COG0333	Belongs to the bacterial ribosomal protein bL32 family
MUA98_RS08105	COG1323	Belongs to the UPF0348 family
MUA98_RS08110	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
MUA98_RS08115	COG0742	ribosomal rna small subunit methyltransferase
MUA98_RS08125	COG4471	UPF0298 protein
MUA98_RS08130	COG0584	glycerophosphoryl diester phosphodiesterase
MUA98_RS08135	COG3679	Belongs to the UPF0342 family
MUA98_RS08140	COG2340	Cysteine-rich secretory protein family
MUA98_RS08150	COG0109	protoheme IX farnesyltransferase activity
MUA98_RS08155	COG1612	heme a metabolic process
MUA98_RS08165	COG0772	Belongs to the SEDS family
MUA98_RS08170	COG4838	Belongs to the UPF0358 family
MUA98_RS08175	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
MUA98_RS08180	COG4896	Protein conserved in bacteria
MUA98_RS08190	COG1217	gtp-binding protein TYPA
MUA98_RS08200	COG0483	inositol monophosphate 1-phosphatase activity
MUA98_RS08205	COG4493	Belongs to the UPF0637 family
MUA98_RS08210	COG1914	H( )-stimulated, divalent metal cation uptake system
MUA98_RS08235	COG1176	ABC-type spermidine putrescine transport system, permease component I
MUA98_RS08240	COG3842	ATPase activity
MUA98_RS08250	COG4476	Belongs to the UPF0223 family
MUA98_RS08260	COG0508	dehydrogenase complex catalyzes the overall conversion of
MUA98_RS08265	COG0022	dehydrogenase e1 component
MUA98_RS08270	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
MUA98_RS08280	COG0242	peptide deformylase activity
MUA98_RS08285	COG5503	Protein of unknown function (DUF1447)
MUA98_RS08290	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
MUA98_RS08300	COG0569	domain protein
MUA98_RS08305	COG1294	oxidase, subunit
MUA98_RS08310	COG1271	oxidase subunit
MUA98_RS08320	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
MUA98_RS08325	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA98_RS08335	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
MUA98_RS08350	COG4716	Myosin-crossreactive antigen
MUA98_RS08360	COG4172	Belongs to the ABC transporter superfamily
MUA98_RS08365	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
MUA98_RS08370	COG0151	Belongs to the GarS family
MUA98_RS08375	COG0138	bifunctional purine biosynthesis protein purh
MUA98_RS08380	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
MUA98_RS08385	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
MUA98_RS08390	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
MUA98_RS08395	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MUA98_RS08400	COG0047	phosphoribosylformylglycinamidine synthase activity
MUA98_RS08405	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
MUA98_RS08410	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
MUA98_RS08415	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
MUA98_RS08420	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
MUA98_RS08425	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
MUA98_RS08435	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
MUA98_RS08440	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
MUA98_RS08445	COG1845	cytochrome c oxidase, subunit III
MUA98_RS08450	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
MUA98_RS08465	COG1316	TRANSCRIPTIONal
MUA98_RS08490	COG3594	Acyltransferase
MUA98_RS08495	COG0436	Aminotransferase
MUA98_RS08500	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
MUA98_RS08510	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
MUA98_RS08515	COG1169	isochorismate synthase
MUA98_RS08520	COG1575	Belongs to the MenA family. Type 1 subfamily
MUA98_RS08525	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUA98_RS08530	COG2314	TM2 domain
MUA98_RS08540	COG1279	arginine transmembrane transporter activity
MUA98_RS08570	COG4824	toxin secretion phage lysis holin
MUA98_RS08670	COG1595	DNA-templated transcription, initiation
MUA98_RS08805	COG4873	Protein conserved in bacteria
MUA98_RS08815	COG0737	Belongs to the 5'-nucleotidase family
MUA98_RS08820	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MUA98_RS08825	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
MUA98_RS08830	COG0861	Integral membrane protein TerC family
MUA98_RS08835	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
MUA98_RS08845	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
MUA98_RS08850	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
MUA98_RS08855	COG2814	Major facilitator Superfamily
MUA98_RS08860	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
MUA98_RS08865	COG2382	esterase
MUA98_RS08870	COG0628	permease
MUA98_RS08910	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MUA98_RS08915	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MUA98_RS08920	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
MUA98_RS08955	COG0569	domain protein
MUA98_RS08955	COG0475	glutathione-regulated potassium exporter activity
MUA98_RS08960	COG2239	Acts as a magnesium transporter
MUA98_RS08965	COG0564	pseudouridine synthase activity
MUA98_RS08970	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
MUA98_RS08975	COG2357	RelA SpoT domain protein
MUA98_RS08990	COG2346	COG2346, Truncated hemoglobins
MUA98_RS08995	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
MUA98_RS09000	COG1164	Oligoendopeptidase f
MUA98_RS09010	COG4862	establishment of competence for transformation
MUA98_RS09020	COG1393	Belongs to the ArsC family
MUA98_RS09025	COG0180	Tryptophanyl-tRNA synthetase
MUA98_RS09030	COG4166	transmembrane transport
MUA98_RS09035	COG4608	Belongs to the ABC transporter superfamily
MUA98_RS09040	COG0444	Belongs to the ABC transporter superfamily
MUA98_RS09045	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
MUA98_RS09050	COG0601	transmembrane transport
MUA98_RS09065	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
MUA98_RS09080	COG0542	response to heat
MUA98_RS09095	COG0561	phosphatase activity
MUA98_RS09100	COG0446	pyridine nucleotide-disulphide oxidoreductase
MUA98_RS09120	COG0179	Fumarylacetoacetate (FAA) hydrolase
MUA98_RS09125	COG1074	ATP-dependent DNA helicase activity
MUA98_RS09130	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
MUA98_RS09145	COG0398	Pfam SNARE associated Golgi protein
MUA98_RS09150	COG0166	Belongs to the GPI family
MUA98_RS09155	COG0137	argininosuccinate synthase activity
MUA98_RS09160	COG0165	Argininosuccinate lyase
MUA98_RS09165	COG0584	glycerophosphoryl diester phosphodiesterase
MUA98_RS09175	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
MUA98_RS09190	COG1902	pentaerythritol trinitrate reductase activity
MUA98_RS09195	COG1098	S1 RNA binding domain
MUA98_RS09200	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
MUA98_RS09210	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MUA98_RS09210	COG2111	Na H antiporter
MUA98_RS09215	COG2111	Na H antiporter
MUA98_RS09220	COG1006	Multisubunit Na H antiporter MnhC subunit
MUA98_RS09225	COG0651	ATP synthesis coupled electron transport
MUA98_RS09230	COG1863	multisubunit Na H antiporter MnhE subunit
MUA98_RS09235	COG2212	antiporter activity
MUA98_RS09240	COG1320	monovalent cation:proton antiporter activity
MUA98_RS09250	COG2050	protein possibly involved in aromatic compounds catabolism
MUA98_RS09255	COG2056	Na+-H+ antiporter family
MUA98_RS09260	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
MUA98_RS09265	COG1252	NADH dehydrogenase
MUA98_RS09270	COG0316	Belongs to the HesB IscA family
MUA98_RS09275	COG4844	belongs to the
MUA98_RS09280	COG1252	NADH dehydrogenase
MUA98_RS09285	COG4837	Protein of unknown function (DUF1462)
MUA98_RS09290	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
MUA98_RS09295	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
MUA98_RS09300	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
MUA98_RS09305	COG1696	Membrane protein involved in D-alanine export
MUA98_RS09310	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
MUA98_RS09320	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
MUA98_RS09325	COG0647	UMP catabolic process
MUA98_RS09330	COG2445	Protein of unknown function DUF86
MUA98_RS09340	COG4470	Protein conserved in bacteria
MUA98_RS09345	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
MUA98_RS09350	COG0737	Belongs to the 5'-nucleotidase family
MUA98_RS09355	COG0730	response to heat
MUA98_RS09360	COG1801	Protein of unknown function DUF72
MUA98_RS09365	COG1253	flavin adenine dinucleotide binding
MUA98_RS09395	COG0719	Fe-S assembly protein
MUA98_RS09400	COG0822	iron-sulfur transferase activity
MUA98_RS09405	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
MUA98_RS09410	COG0719	Fe-S assembly protein
MUA98_RS09415	COG0396	ATPase activity
MUA98_RS09425	COG3237	CsbD-like
MUA98_RS09435	COG1464	Belongs to the NlpA lipoprotein family
MUA98_RS09440	COG2011	ABC-type metal ion transport system permease component
MUA98_RS09445	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MUA98_RS09455	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MUA98_RS09460	COG0509	glycine decarboxylation via glycine cleavage system
MUA98_RS09465	COG1393	Belongs to the ArsC family
MUA98_RS09470	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
MUA98_RS09480	COG0710	3-dehydroquinate dehydratase activity
MUA98_RS09485	COG1764	response to oxidative stress
MUA98_RS09540	COG4195	phage-related replication protein
MUA98_RS09555	COG1278	Cold shock
MUA98_RS09585	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
MUA98_RS09630	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
MUA98_RS09635	COG0557	exoribonuclease II activity
MUA98_RS09640	COG1647	Serine aminopeptidase, S33
MUA98_RS09645	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MUA98_RS09655	COG0148	phosphopyruvate hydratase activity
MUA98_RS09660	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
MUA98_RS09665	COG0149	triose-phosphate isomerase activity
MUA98_RS09670	COG0126	phosphoglycerate kinase activity
MUA98_RS09675	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
MUA98_RS09695	COG1090	epimerase
MUA98_RS09705	COG0740	serine-type endopeptidase activity
MUA98_RS09715	COG1481	regulation of sporulation
MUA98_RS09720	COG0391	Required for morphogenesis under gluconeogenic growth conditions
MUA98_RS09725	COG1660	Displays ATPase and GTPase activities
MUA98_RS09730	COG0492	ferredoxin-NADP+ reductase activity
MUA98_RS09745	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
MUA98_RS09750	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
MUA98_RS09755	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
MUA98_RS09760	COG0556	nucleotide-excision repair
MUA98_RS09775	COG3942	CHAP domain
MUA98_RS09775	COG1388	LysM domain
MUA98_RS09785	COG0653	protein targeting
MUA98_RS09790	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
MUA98_RS09795	COG1040	competence protein
MUA98_RS09800	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
MUA98_RS09810	COG1739	Uncharacterized protein family UPF0029
MUA98_RS09815	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
MUA98_RS09820	COG2199	diguanylate cyclase activity
MUA98_RS09835	COG2195	Cleaves the N-terminal amino acid of tripeptides
MUA98_RS09840	COG1929	Belongs to the glycerate kinase type-1 family
MUA98_RS09860	COG0812	UDP-N-acetylmuramate dehydrogenase activity
MUA98_RS09875	COG4604	ABC transporter, ATP-binding protein
MUA98_RS09880	COG4605	iron ion homeostasis
MUA98_RS09885	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA98_RS09895	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUA98_RS09900	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
MUA98_RS09905	COG1780	Probably involved in ribonucleotide reductase function
MUA98_RS09915	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
MUA98_RS09920	COG3104	oligopeptide transport
MUA98_RS09930	COG1597	lipid kinase activity
MUA98_RS09935	COG1454	alcohol dehydrogenase
MUA98_RS09935	COG1012	belongs to the aldehyde dehydrogenase family
MUA98_RS09940	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
MUA98_RS09945	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
MUA98_RS09950	COG1174	glycine betaine transport
MUA98_RS09960	COG0514	ATP-dependent DNA helicase (RecQ)
MUA98_RS09965	COG0488	(ABC) transporter
MUA98_RS09985	COG1368	sulfuric ester hydrolase activity
MUA98_RS09995	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
MUA98_RS10010	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
MUA98_RS10020	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
MUA98_RS10025	COG0720	synthase
MUA98_RS10030	COG0602	queuosine metabolic process
MUA98_RS10055	COG0745	RESPONSE REGULATOR receiver
MUA98_RS10060	COG5002	protein histidine kinase activity
MUA98_RS10065	COG0463	Glycosyl transferase, family 2
MUA98_RS10070	COG0656	L-ascorbic acid biosynthetic process
MUA98_RS10075	COG1253	flavin adenine dinucleotide binding
MUA98_RS10080	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
MUA98_RS10085	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUA98_RS10085	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
MUA98_RS10085	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
MUA98_RS10090	COG1105	Belongs to the carbohydrate kinase PfkB family
MUA98_RS10095	COG1349	DNA-binding transcription factor activity
MUA98_RS10100	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
MUA98_RS10125	COG0415	Belongs to the DNA photolyase family
MUA98_RS10130	COG0471	metal ion transport
MUA98_RS10135	COG0039	L-malate dehydrogenase activity
MUA98_RS10155	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
MUA98_RS10160	COG4988	ABC transporter
MUA98_RS10165	COG1968	undecaprenyl-diphosphatase activity
MUA98_RS10180	COG1671	Belongs to the UPF0178 family
MUA98_RS10185	COG1611	Belongs to the LOG family
MUA98_RS10210	COG2839	Protein conserved in bacteria
MUA98_RS10215	COG2814	Major facilitator Superfamily
MUA98_RS10220	COG0583	DNA-binding transcription factor activity
MUA98_RS10240	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
MUA98_RS10250	COG0217	transcriptional regulatory protein
MUA98_RS10270	COG3942	CHAP domain
MUA98_RS10270	COG1388	LysM domain
MUA98_RS10275	COG0306	phosphate transporter
MUA98_RS10280	COG1392	Phosphate transport regulator
MUA98_RS10285	COG0577	efflux transmembrane transporter activity
MUA98_RS10290	COG1136	(ABC) transporter
MUA98_RS10295	COG2205	protein histidine kinase activity
MUA98_RS10300	COG0745	RESPONSE REGULATOR receiver
MUA98_RS10305	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUA98_RS10320	COG3949	Membrane
MUA98_RS10330	COG1120	ATPase activity
MUA98_RS10335	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
MUA98_RS10340	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MUA98_RS10345	COG1132	(ABC) transporter
MUA98_RS10350	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
MUA98_RS10360	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA98_RS10365	COG1682	transport, permease protein
MUA98_RS10370	COG1134	teichoic acid transport
MUA98_RS10375	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
MUA98_RS10385	COG1321	iron dependent repressor
MUA98_RS10390	COG1121	(ABC) transporter
MUA98_RS10395	COG1108	ABC-type Mn2 Zn2 transport systems permease components
MUA98_RS10400	COG0803	Belongs to the bacterial solute-binding protein 9 family
MUA98_RS10410	COG1320	monovalent cation:proton antiporter activity
MUA98_RS10415	COG2212	antiporter activity
MUA98_RS10420	COG1863	multisubunit Na H antiporter MnhE subunit
MUA98_RS10425	COG0651	ATP synthesis coupled electron transport
MUA98_RS10430	COG1006	Multisubunit Na H antiporter MnhC subunit
MUA98_RS10435	COG2111	Na H antiporter
MUA98_RS10440	COG2111	Na H antiporter
MUA98_RS10440	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MUA98_RS10470	COG0596	Alpha beta hydrolase
MUA98_RS10490	COG0546	phosphoglycolate phosphatase activity
MUA98_RS10495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
MUA98_RS10500	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
MUA98_RS10510	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
MUA98_RS10515	COG0018	arginyl-trna synthetase
MUA98_RS10530	COG1064	alcohol dehydrogenase
MUA98_RS10535	COG3875	lactate racemase activity
MUA98_RS10540	COG1606	tRNA processing
MUA98_RS10545	COG1691	(AIR) carboxylase
MUA98_RS10550	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
MUA98_RS10560	COG1078	dGTPase activity
MUA98_RS10570	COG0667	Aldo Keto reductase
MUA98_RS10580	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
MUA98_RS10585	COG4844	belongs to the
MUA98_RS10605	COG0095	Lipoate-protein ligase
MUA98_RS10610	COG0280	phosphate acetyltransferase
MUA98_RS10615	COG3253	May function as heme-dependent peroxidase
MUA98_RS10635	COG0531	amino acid
MUA98_RS10640	COG2363	Small membrane protein
MUA98_RS10650	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
MUA98_RS10660	COG0351	phosphomethylpyrimidine kinase
MUA98_RS10680	COG0183	Belongs to the thiolase family
MUA98_RS10685	COG0318	PFAM AMP-dependent synthetase and ligase
MUA98_RS10695	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
MUA98_RS10700	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
MUA98_RS10705	COG0363	glucosamine-6-phosphate deaminase activity
MUA98_RS10715	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
MUA98_RS10720	COG1469	GTP cyclohydrolase I activity
MUA98_RS10745	COG0431	NADPH-dependent FMN reductase
MUA98_RS10750	COG0561	phosphatase activity
MUA98_RS10760	COG1428	Deoxynucleoside kinase
MUA98_RS10765	COG1428	Deoxynucleoside kinase
MUA98_RS10770	COG1028	Short-chain dehydrogenase reductase Sdr
MUA98_RS10775	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
MUA98_RS10780	COG0546	phosphoglycolate phosphatase activity
MUA98_RS10785	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
MUA98_RS10790	COG1063	alcohol dehydrogenase
MUA98_RS10795	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
MUA98_RS10800	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
MUA98_RS10805	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
MUA98_RS10825	COG1473	amidohydrolase
MUA98_RS10830	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
MUA98_RS10835	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
MUA98_RS10845	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
MUA98_RS10855	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
MUA98_RS10860	COG0085	RNA polymerase activity
MUA98_RS10865	COG2813	Specifically methylates the guanine in position
MUA98_RS10870	COG0222	ribosome binding
MUA98_RS10875	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
MUA98_RS10880	COG0081	regulation of translation
MUA98_RS10885	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
MUA98_RS10890	COG0250	Participates in transcription elongation, termination and antitermination
MUA98_RS10895	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
MUA98_RS10900	COG0267	Belongs to the bacterial ribosomal protein bL33 family
MUA98_RS10910	COG3688	RNA-binding protein containing a PIN domain
MUA98_RS10915	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
MUA98_RS10920	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
MUA98_RS10925	COG0215	cysteine-tRNA ligase activity
MUA98_RS10930	COG1045	serine acetyltransferase
MUA98_RS10935	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
MUA98_RS10940	COG4956	integral membrane protein (PIN domain superfamily)
MUA98_RS10945	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
MUA98_RS10950	COG0542	response to heat
MUA98_RS10955	COG3869	Catalyzes the specific phosphorylation of arginine residues in
MUA98_RS10960	COG3880	PFAM UvrB UvrC protein
MUA98_RS10965	COG4463	regulation of RNA biosynthetic process
MUA98_RS10970	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
MUA98_RS10980	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
MUA98_RS10985	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
MUA98_RS10990	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
MUA98_RS11075	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
MUA98_RS11080	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
MUA98_RS11085	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
MUA98_RS11090	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
MUA98_RS11095	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MUA98_RS11100	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
MUA98_RS11105	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
MUA98_RS11110	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
MUA98_RS11115	COG0037	tRNA processing
MUA98_RS11120	COG1098	S1 RNA binding domain
MUA98_RS11130	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
MUA98_RS11135	COG3956	TIGRFAM MazG family protein
MUA98_RS11140	COG2244	polysaccharide biosynthetic process
MUA98_RS11145	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
MUA98_RS11150	COG0193	aminoacyl-tRNA hydrolase activity
MUA98_RS11155	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
MUA98_RS11160	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
MUA98_RS11165	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
MUA98_RS11170	COG2088	sporulation resulting in formation of a cellular spore
MUA98_RS11175	COG0251	oxidation-reduction process
MUA98_RS11180	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUA98_RS11185	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
MUA98_RS11190	COG4466	Protein conserved in bacteria
MUA98_RS11195	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
MUA98_RS11200	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
MUA98_RS11205	COG0084	hydrolase, TatD family'
MUA98_RS11210	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUA98_RS11210	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
MUA98_RS11215	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
MUA98_RS11220	COG2827	Endonuclease containing a URI domain
MUA98_RS11225	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
MUA98_RS11230	COG4467	Involved in initiation control of chromosome replication
MUA98_RS11235	COG1774	PSP1 C-terminal conserved region
MUA98_RS11240	COG0470	DNA polymerase III
MUA98_RS11245	COG3870	Protein conserved in bacteria
MUA98_RS11250	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
MUA98_RS11255	COG1982	Orn Lys Arg decarboxylase major
MUA98_RS11280	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
MUA98_RS11285	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
MUA98_RS11290	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
MUA98_RS11310	COG2855	membrane
MUA98_RS11315	COG0583	DNA-binding transcription factor activity
MUA98_RS11325	COG0493	'glutamate synthase
MUA98_RS11330	COG0069	glutamate synthase activity
MUA98_RS11330	COG0067	glutamate synthase
MUA98_RS11330	COG0070	glutamate synthase
MUA98_RS11335	COG0583	DNA-binding transcription factor activity
MUA98_RS11360	COG0438	transferase activity, transferring glycosyl groups
MUA98_RS11365	COG1388	LysM domain
MUA98_RS11365	COG3942	CHAP domain
MUA98_RS11375	COG2011	ABC-type metal ion transport system permease component
MUA98_RS11380	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
MUA98_RS11385	COG0626	cystathionine gamma-synthase activity
MUA98_RS11390	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
MUA98_RS11400	COG0733	neurotransmitter:sodium symporter activity
MUA98_RS11410	COG1647	Serine aminopeptidase, S33
MUA98_RS11425	COG5609	conserved protein (DUF2294)
MUA98_RS11430	COG3002	Belongs to the UPF0753 family
MUA98_RS11435	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
MUA98_RS11450	COG0523	cobalamin synthesis protein
MUA98_RS11495	COG0518	GMP synthase (glutamine-hydrolyzing) activity
MUA98_RS11495	COG0519	Catalyzes the synthesis of GMP from XMP
MUA98_RS11500	COG0516	GMP reductase activity
MUA98_RS11500	COG0517	IMP dehydrogenase activity
MUA98_RS11505	COG2233	PERMEase
MUA98_RS11510	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
MUA98_RS11525	COG5183	chlorophyll binding
MUA98_RS11530	COG1823	symporter activity
MUA98_RS11535	COG0778	Nitroreductase
MUA98_RS11545	COG0450	alkyl hydroperoxide reductase
MUA98_RS11550	COG3634	alkyl hydroperoxide reductase activity
MUA98_RS11570	COG1280	lysine exporter protein (LysE YggA)
MUA98_RS11590	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
MUA98_RS11600	COG0360	Binds together with S18 to 16S ribosomal RNA
MUA98_RS11615	COG0012	GTP binding
MUA98_RS11620	COG4481	Protein conserved in bacteria
MUA98_RS11625	COG0668	transmembrane transport
MUA98_RS11630	COG1475	DNA binding
MUA98_RS11635	COG0626	cystathionine gamma-synthase activity
MUA98_RS11640	COG0626	cystathionine gamma-synthase activity
MUA98_RS11645	COG0646	methionine synthase
MUA98_RS11645	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
MUA98_RS11650	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
MUA98_RS11660	COG0183	Belongs to the thiolase family
MUA98_RS11675	COG1476	TRANSCRIPTIONal
MUA98_RS11685	COG4555	ABC transporter
MUA98_RS11705	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
MUA98_RS11745	COG1136	(ABC) transporter
MUA98_RS11750	COG0577	efflux transmembrane transporter activity
MUA98_RS11765	COG0577	efflux transmembrane transporter activity
MUA98_RS11770	COG1136	(ABC) transporter
MUA98_RS11805	COG1475	DNA binding
MUA98_RS11810	COG0357	Ribosomal RNA small subunit methyltransferase G
MUA98_RS11815	COG0445	tRNA wobble uridine modification
MUA98_RS11820	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
MUA98_RS11825	COG0594	ribonuclease P activity