locus-tag	class	description
LQF30_RS00010	COG0594	ribonuclease P activity
LQF30_RS00015	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
LQF30_RS00020	COG0445	tRNA wobble uridine modification
LQF30_RS00025	COG0357	Ribosomal RNA small subunit methyltransferase G
LQF30_RS00030	COG1475	DNA binding
LQF30_RS00065	COG1136	(ABC) transporter
LQF30_RS00070	COG0577	efflux transmembrane transporter activity
LQF30_RS00085	COG0577	efflux transmembrane transporter activity
LQF30_RS00090	COG1136	(ABC) transporter
LQF30_RS00135	COG4555	ABC transporter
LQF30_RS00145	COG1476	TRANSCRIPTIONal
LQF30_RS00160	COG0183	Belongs to the thiolase family
LQF30_RS00170	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
LQF30_RS00175	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LQF30_RS00175	COG0646	methionine synthase
LQF30_RS00180	COG0626	cystathionine gamma-synthase activity
LQF30_RS00185	COG0626	cystathionine gamma-synthase activity
LQF30_RS00190	COG1475	DNA binding
LQF30_RS00195	COG0668	transmembrane transport
LQF30_RS00200	COG4481	Protein conserved in bacteria
LQF30_RS00205	COG0012	GTP binding
LQF30_RS00220	COG0360	Binds together with S18 to 16S ribosomal RNA
LQF30_RS00230	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
LQF30_RS00255	COG1280	lysine exporter protein (LysE YggA)
LQF30_RS00275	COG3634	alkyl hydroperoxide reductase activity
LQF30_RS00280	COG0450	alkyl hydroperoxide reductase
LQF30_RS00290	COG0778	Nitroreductase
LQF30_RS00295	COG1823	symporter activity
LQF30_RS00300	COG5183	chlorophyll binding
LQF30_RS00315	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LQF30_RS00320	COG2233	PERMEase
LQF30_RS00325	COG0517	IMP dehydrogenase activity
LQF30_RS00325	COG0516	GMP reductase activity
LQF30_RS00330	COG0518	GMP synthase (glutamine-hydrolyzing) activity
LQF30_RS00330	COG0519	Catalyzes the synthesis of GMP from XMP
LQF30_RS00335	COG0582	viral genome integration into host DNA
LQF30_RS00435	COG2244	polysaccharide biosynthetic process
LQF30_RS00490	COG0523	cobalamin synthesis protein
LQF30_RS00505	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LQF30_RS00510	COG3002	Belongs to the UPF0753 family
LQF30_RS00515	COG5609	conserved protein (DUF2294)
LQF30_RS00530	COG1647	Serine aminopeptidase, S33
LQF30_RS00540	COG0733	neurotransmitter:sodium symporter activity
LQF30_RS00550	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LQF30_RS00555	COG0626	cystathionine gamma-synthase activity
LQF30_RS00560	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LQF30_RS00565	COG2011	ABC-type metal ion transport system permease component
LQF30_RS00575	COG1388	LysM domain
LQF30_RS00575	COG3942	CHAP domain
LQF30_RS00580	COG0438	transferase activity, transferring glycosyl groups
LQF30_RS00605	COG0583	DNA-binding transcription factor activity
LQF30_RS00610	COG0067	glutamate synthase
LQF30_RS00610	COG0069	glutamate synthase activity
LQF30_RS00610	COG0070	glutamate synthase
LQF30_RS00615	COG0493	'glutamate synthase
LQF30_RS00625	COG0583	DNA-binding transcription factor activity
LQF30_RS00630	COG2855	membrane
LQF30_RS00650	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LQF30_RS00655	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
LQF30_RS00660	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
LQF30_RS00685	COG1982	Orn Lys Arg decarboxylase major
LQF30_RS00690	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
LQF30_RS00695	COG3870	Protein conserved in bacteria
LQF30_RS00700	COG0470	DNA polymerase III
LQF30_RS00705	COG1774	PSP1 C-terminal conserved region
LQF30_RS00710	COG4467	Involved in initiation control of chromosome replication
LQF30_RS00715	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LQF30_RS00720	COG2827	Endonuclease containing a URI domain
LQF30_RS00725	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LQF30_RS00730	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LQF30_RS00730	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LQF30_RS00735	COG0084	hydrolase, TatD family'
LQF30_RS00740	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LQF30_RS00745	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
LQF30_RS00750	COG4466	Protein conserved in bacteria
LQF30_RS00755	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
LQF30_RS00760	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LQF30_RS00765	COG0251	oxidation-reduction process
LQF30_RS00770	COG2088	sporulation resulting in formation of a cellular spore
LQF30_RS00775	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
LQF30_RS00780	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
LQF30_RS00785	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
LQF30_RS00790	COG0193	aminoacyl-tRNA hydrolase activity
LQF30_RS00795	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LQF30_RS00800	COG2244	polysaccharide biosynthetic process
LQF30_RS00805	COG3956	TIGRFAM MazG family protein
LQF30_RS00810	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LQF30_RS00820	COG1098	S1 RNA binding domain
LQF30_RS00825	COG0037	tRNA processing
LQF30_RS00830	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LQF30_RS00835	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LQF30_RS00840	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
LQF30_RS00845	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LQF30_RS00850	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LQF30_RS00855	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LQF30_RS00860	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LQF30_RS00865	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
LQF30_RS00950	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LQF30_RS00955	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
LQF30_RS00960	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
LQF30_RS00970	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LQF30_RS00975	COG4463	regulation of RNA biosynthetic process
LQF30_RS00980	COG3880	PFAM UvrB UvrC protein
LQF30_RS00985	COG3869	Catalyzes the specific phosphorylation of arginine residues in
LQF30_RS00990	COG0542	response to heat
LQF30_RS00995	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LQF30_RS01000	COG4956	integral membrane protein (PIN domain superfamily)
LQF30_RS01005	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
LQF30_RS01010	COG1045	serine acetyltransferase
LQF30_RS01015	COG0215	cysteine-tRNA ligase activity
LQF30_RS01020	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
LQF30_RS01025	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LQF30_RS01030	COG3688	RNA-binding protein containing a PIN domain
LQF30_RS01040	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LQF30_RS01045	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LQF30_RS01050	COG0250	Participates in transcription elongation, termination and antitermination
LQF30_RS01055	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LQF30_RS01060	COG0081	regulation of translation
LQF30_RS01065	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
LQF30_RS01070	COG0222	ribosome binding
LQF30_RS01075	COG2813	Specifically methylates the guanine in position
LQF30_RS01080	COG0085	RNA polymerase activity
LQF30_RS01085	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
LQF30_RS01095	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
LQF30_RS01105	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
LQF30_RS01110	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
LQF30_RS01115	COG1473	amidohydrolase
LQF30_RS01135	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LQF30_RS01140	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LQF30_RS01145	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
LQF30_RS01150	COG1063	alcohol dehydrogenase
LQF30_RS01155	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LQF30_RS01160	COG0546	phosphoglycolate phosphatase activity
LQF30_RS01165	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LQF30_RS01170	COG1028	Short-chain dehydrogenase reductase Sdr
LQF30_RS01175	COG1428	Deoxynucleoside kinase
LQF30_RS01180	COG1428	Deoxynucleoside kinase
LQF30_RS01190	COG0561	phosphatase activity
LQF30_RS01195	COG0431	NADPH-dependent FMN reductase
LQF30_RS01215	COG1469	GTP cyclohydrolase I activity
LQF30_RS01220	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LQF30_RS01230	COG0363	glucosamine-6-phosphate deaminase activity
LQF30_RS01235	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
LQF30_RS01250	COG0318	PFAM AMP-dependent synthetase and ligase
LQF30_RS01255	COG0183	Belongs to the thiolase family
LQF30_RS01280	COG0351	phosphomethylpyrimidine kinase
LQF30_RS01290	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
LQF30_RS01300	COG2363	Small membrane protein
LQF30_RS01305	COG0531	amino acid
LQF30_RS01325	COG3253	May function as heme-dependent peroxidase
LQF30_RS01330	COG0280	phosphate acetyltransferase
LQF30_RS01335	COG0095	Lipoate-protein ligase
LQF30_RS01355	COG4844	belongs to the
LQF30_RS01590	COG4195	phage-related replication protein
LQF30_RS01635	COG0667	Aldo Keto reductase
LQF30_RS01645	COG1078	dGTPase activity
LQF30_RS01655	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
LQF30_RS01660	COG1691	(AIR) carboxylase
LQF30_RS01665	COG1606	tRNA processing
LQF30_RS01670	COG3875	lactate racemase activity
LQF30_RS01675	COG1064	alcohol dehydrogenase
LQF30_RS01690	COG0018	arginyl-trna synthetase
LQF30_RS01695	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LQF30_RS01705	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LQF30_RS01710	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LQF30_RS01715	COG0546	phosphoglycolate phosphatase activity
LQF30_RS01735	COG0596	Alpha beta hydrolase
LQF30_RS01765	COG2111	Na H antiporter
LQF30_RS01765	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LQF30_RS01770	COG2111	Na H antiporter
LQF30_RS01775	COG1006	Multisubunit Na H antiporter MnhC subunit
LQF30_RS01780	COG0651	ATP synthesis coupled electron transport
LQF30_RS01785	COG1863	multisubunit Na H antiporter MnhE subunit
LQF30_RS01790	COG2212	antiporter activity
LQF30_RS01795	COG1320	monovalent cation:proton antiporter activity
LQF30_RS01805	COG0803	Belongs to the bacterial solute-binding protein 9 family
LQF30_RS01810	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LQF30_RS01815	COG1121	(ABC) transporter
LQF30_RS01820	COG1321	iron dependent repressor
LQF30_RS01830	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
LQF30_RS01835	COG1134	teichoic acid transport
LQF30_RS01840	COG1682	transport, permease protein
LQF30_RS01845	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LQF30_RS01855	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
LQF30_RS01860	COG1132	(ABC) transporter
LQF30_RS01865	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LQF30_RS01870	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LQF30_RS01875	COG1120	ATPase activity
LQF30_RS01885	COG3949	Membrane
LQF30_RS01900	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LQF30_RS01905	COG0745	RESPONSE REGULATOR receiver
LQF30_RS01910	COG2205	protein histidine kinase activity
LQF30_RS01915	COG1136	(ABC) transporter
LQF30_RS01920	COG0577	efflux transmembrane transporter activity
LQF30_RS01925	COG1392	Phosphate transport regulator
LQF30_RS01930	COG0306	phosphate transporter
LQF30_RS01935	COG3942	CHAP domain
LQF30_RS01935	COG1388	LysM domain
LQF30_RS01955	COG0217	transcriptional regulatory protein
LQF30_RS01965	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
LQF30_RS01985	COG0583	DNA-binding transcription factor activity
LQF30_RS01990	COG2814	Major facilitator Superfamily
LQF30_RS01995	COG2839	Protein conserved in bacteria
LQF30_RS02020	COG1611	Belongs to the LOG family
LQF30_RS02040	COG1968	undecaprenyl-diphosphatase activity
LQF30_RS02045	COG4988	ABC transporter
LQF30_RS02050	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LQF30_RS02070	COG0039	L-malate dehydrogenase activity
LQF30_RS02075	COG0471	metal ion transport
LQF30_RS02080	COG0415	Belongs to the DNA photolyase family
LQF30_RS02115	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LQF30_RS02120	COG1349	DNA-binding transcription factor activity
LQF30_RS02125	COG1105	Belongs to the carbohydrate kinase PfkB family
LQF30_RS02130	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LQF30_RS02130	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LQF30_RS02130	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LQF30_RS02135	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LQF30_RS02140	COG1253	flavin adenine dinucleotide binding
LQF30_RS02145	COG0656	L-ascorbic acid biosynthetic process
LQF30_RS02150	COG0463	Glycosyl transferase, family 2
LQF30_RS02155	COG5002	protein histidine kinase activity
LQF30_RS02160	COG0745	RESPONSE REGULATOR receiver
LQF30_RS02190	COG0602	queuosine metabolic process
LQF30_RS02195	COG0720	synthase
LQF30_RS02200	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
LQF30_RS02210	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LQF30_RS02225	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LQF30_RS02235	COG1368	sulfuric ester hydrolase activity
LQF30_RS02255	COG0488	(ABC) transporter
LQF30_RS02260	COG0514	ATP-dependent DNA helicase (RecQ)
LQF30_RS02270	COG1174	glycine betaine transport
LQF30_RS02275	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
LQF30_RS02280	COG4502	5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
LQF30_RS02285	COG1012	belongs to the aldehyde dehydrogenase family
LQF30_RS02285	COG1454	alcohol dehydrogenase
LQF30_RS02290	COG1597	lipid kinase activity
LQF30_RS02300	COG3104	oligopeptide transport
LQF30_RS02305	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
LQF30_RS02315	COG1780	Probably involved in ribonucleotide reductase function
LQF30_RS02320	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LQF30_RS02325	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
LQF30_RS02335	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LQF30_RS02340	COG4605	iron ion homeostasis
LQF30_RS02345	COG4604	ABC transporter, ATP-binding protein
LQF30_RS02360	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LQF30_RS02380	COG1929	Belongs to the glycerate kinase type-1 family
LQF30_RS02385	COG2195	Cleaves the N-terminal amino acid of tripeptides
LQF30_RS02400	COG2199	diguanylate cyclase activity
LQF30_RS02405	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LQF30_RS02410	COG1739	Uncharacterized protein family UPF0029
LQF30_RS02420	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LQF30_RS02425	COG1040	competence protein
LQF30_RS02430	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LQF30_RS02435	COG0653	protein targeting
LQF30_RS02445	COG3942	CHAP domain
LQF30_RS02445	COG1388	LysM domain
LQF30_RS02460	COG0556	nucleotide-excision repair
LQF30_RS02465	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LQF30_RS02470	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
LQF30_RS02475	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
LQF30_RS02490	COG0492	ferredoxin-NADP+ reductase activity
LQF30_RS02495	COG1660	Displays ATPase and GTPase activities
LQF30_RS02500	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LQF30_RS02505	COG1481	regulation of sporulation
LQF30_RS02515	COG0740	serine-type endopeptidase activity
LQF30_RS02525	COG1090	epimerase
LQF30_RS02545	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LQF30_RS02550	COG0126	phosphoglycerate kinase activity
LQF30_RS02555	COG0149	triose-phosphate isomerase activity
LQF30_RS02560	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
LQF30_RS02565	COG0148	phosphopyruvate hydratase activity
LQF30_RS02575	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LQF30_RS02580	COG1647	Serine aminopeptidase, S33
LQF30_RS02585	COG0557	exoribonuclease II activity
LQF30_RS02590	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
LQF30_RS02630	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LQF30_RS02655	COG1278	Cold shock
LQF30_RS02670	COG4195	phage-related replication protein
LQF30_RS02720	COG1764	response to oxidative stress
LQF30_RS02725	COG0710	3-dehydroquinate dehydratase activity
LQF30_RS02735	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LQF30_RS02740	COG1393	Belongs to the ArsC family
LQF30_RS02745	COG0509	glycine decarboxylation via glycine cleavage system
LQF30_RS02750	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LQF30_RS02760	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
LQF30_RS02765	COG2011	ABC-type metal ion transport system permease component
LQF30_RS02770	COG1464	Belongs to the NlpA lipoprotein family
LQF30_RS02780	COG3237	CsbD-like
LQF30_RS02790	COG0396	ATPase activity
LQF30_RS02795	COG0719	Fe-S assembly protein
LQF30_RS02800	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LQF30_RS02805	COG0822	iron-sulfur transferase activity
LQF30_RS02810	COG0719	Fe-S assembly protein
LQF30_RS02825	COG1253	flavin adenine dinucleotide binding
LQF30_RS02830	COG1801	Protein of unknown function DUF72
LQF30_RS02835	COG0730	response to heat
LQF30_RS02840	COG0737	Belongs to the 5'-nucleotidase family
LQF30_RS02845	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
LQF30_RS02850	COG4470	Protein conserved in bacteria
LQF30_RS02860	COG2445	Protein of unknown function DUF86
LQF30_RS02865	COG0647	UMP catabolic process
LQF30_RS02870	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LQF30_RS02880	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LQF30_RS02885	COG1696	Membrane protein involved in D-alanine export
LQF30_RS02890	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LQF30_RS02895	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LQF30_RS02900	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LQF30_RS02905	COG4837	Protein of unknown function (DUF1462)
LQF30_RS02910	COG1252	NADH dehydrogenase
LQF30_RS02915	COG4844	belongs to the
LQF30_RS02920	COG0316	Belongs to the HesB IscA family
LQF30_RS02925	COG1252	NADH dehydrogenase
LQF30_RS02930	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
LQF30_RS02935	COG2056	Na+-H+ antiporter family
LQF30_RS02940	COG2050	protein possibly involved in aromatic compounds catabolism
LQF30_RS02950	COG1320	monovalent cation:proton antiporter activity
LQF30_RS02955	COG2212	antiporter activity
LQF30_RS02960	COG1863	multisubunit Na H antiporter MnhE subunit
LQF30_RS02965	COG0651	ATP synthesis coupled electron transport
LQF30_RS02970	COG1006	Multisubunit Na H antiporter MnhC subunit
LQF30_RS02975	COG2111	Na H antiporter
LQF30_RS02980	COG2111	Na H antiporter
LQF30_RS02980	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LQF30_RS02990	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LQF30_RS02995	COG1098	S1 RNA binding domain
LQF30_RS03000	COG1902	pentaerythritol trinitrate reductase activity
LQF30_RS03015	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LQF30_RS03025	COG0584	glycerophosphoryl diester phosphodiesterase
LQF30_RS03030	COG0165	Argininosuccinate lyase
LQF30_RS03035	COG0137	argininosuccinate synthase activity
LQF30_RS03040	COG0166	Belongs to the GPI family
LQF30_RS03045	COG0398	Pfam SNARE associated Golgi protein
LQF30_RS03060	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
LQF30_RS03065	COG1074	ATP-dependent DNA helicase activity
LQF30_RS03070	COG0179	Fumarylacetoacetate (FAA) hydrolase
LQF30_RS03090	COG0446	pyridine nucleotide-disulphide oxidoreductase
LQF30_RS03095	COG0561	phosphatase activity
LQF30_RS03110	COG0542	response to heat
LQF30_RS03125	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LQF30_RS03140	COG0601	transmembrane transport
LQF30_RS03145	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LQF30_RS03150	COG0444	Belongs to the ABC transporter superfamily
LQF30_RS03155	COG4608	Belongs to the ABC transporter superfamily
LQF30_RS03160	COG4166	transmembrane transport
LQF30_RS03165	COG0180	Tryptophanyl-tRNA synthetase
LQF30_RS03170	COG1393	Belongs to the ArsC family
LQF30_RS03175	COG4862	establishment of competence for transformation
LQF30_RS03185	COG1164	Oligoendopeptidase f
LQF30_RS03190	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LQF30_RS03195	COG2346	COG2346, Truncated hemoglobins
LQF30_RS03210	COG2357	RelA SpoT domain protein
LQF30_RS03215	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
LQF30_RS03220	COG0564	pseudouridine synthase activity
LQF30_RS03225	COG2239	Acts as a magnesium transporter
LQF30_RS03230	COG0569	domain protein
LQF30_RS03230	COG0475	glutathione-regulated potassium exporter activity
LQF30_RS03305	COG0628	permease
LQF30_RS03310	COG2382	esterase
LQF30_RS03315	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
LQF30_RS03320	COG2814	Major facilitator Superfamily
LQF30_RS03325	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LQF30_RS03330	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LQF30_RS03340	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
LQF30_RS03345	COG0861	Integral membrane protein TerC family
LQF30_RS03350	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LQF30_RS03355	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LQF30_RS03360	COG0737	Belongs to the 5'-nucleotidase family
LQF30_RS03370	COG4873	Protein conserved in bacteria
LQF30_RS03415	COG1279	arginine transmembrane transporter activity
LQF30_RS03425	COG2314	TM2 domain
LQF30_RS03430	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LQF30_RS03435	COG1575	Belongs to the MenA family. Type 1 subfamily
LQF30_RS03440	COG1169	isochorismate synthase
LQF30_RS03445	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
LQF30_RS03455	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LQF30_RS03460	COG0436	Aminotransferase
LQF30_RS03465	COG3594	Acyltransferase
LQF30_RS03490	COG1316	TRANSCRIPTIONal
LQF30_RS03510	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
LQF30_RS03515	COG1845	cytochrome c oxidase, subunit III
LQF30_RS03520	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LQF30_RS03525	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LQF30_RS03535	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
LQF30_RS03540	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LQF30_RS03545	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LQF30_RS03550	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
LQF30_RS03555	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LQF30_RS03560	COG0047	phosphoribosylformylglycinamidine synthase activity
LQF30_RS03565	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LQF30_RS03570	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LQF30_RS03575	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
LQF30_RS03580	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LQF30_RS03585	COG0138	bifunctional purine biosynthesis protein purh
LQF30_RS03590	COG0151	Belongs to the GarS family
LQF30_RS03595	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LQF30_RS03600	COG4172	Belongs to the ABC transporter superfamily
LQF30_RS03610	COG4716	Myosin-crossreactive antigen
LQF30_RS03625	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LQF30_RS03635	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LQF30_RS03640	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LQF30_RS03650	COG1271	oxidase subunit
LQF30_RS03655	COG1294	oxidase, subunit
LQF30_RS03660	COG0569	domain protein
LQF30_RS03665	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LQF30_RS03670	COG5503	Protein of unknown function (DUF1447)
LQF30_RS03675	COG0242	peptide deformylase activity
LQF30_RS03685	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LQF30_RS03690	COG0022	dehydrogenase e1 component
LQF30_RS03695	COG0508	dehydrogenase complex catalyzes the overall conversion of
LQF30_RS03705	COG4476	Belongs to the UPF0223 family
LQF30_RS03715	COG3842	ATPase activity
LQF30_RS03720	COG1176	ABC-type spermidine putrescine transport system, permease component I
LQF30_RS03745	COG1914	H( )-stimulated, divalent metal cation uptake system
LQF30_RS03750	COG4493	Belongs to the UPF0637 family
LQF30_RS03755	COG0483	inositol monophosphate 1-phosphatase activity
LQF30_RS03765	COG1217	gtp-binding protein TYPA
LQF30_RS03775	COG4896	Protein conserved in bacteria
LQF30_RS03780	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LQF30_RS03785	COG4838	Belongs to the UPF0358 family
LQF30_RS03790	COG0772	Belongs to the SEDS family
LQF30_RS03800	COG1612	heme a metabolic process
LQF30_RS03805	COG0109	protoheme IX farnesyltransferase activity
LQF30_RS03820	COG2340	Cysteine-rich secretory protein family
LQF30_RS03825	COG3679	Belongs to the UPF0342 family
LQF30_RS03830	COG0584	glycerophosphoryl diester phosphodiesterase
LQF30_RS03835	COG4471	UPF0298 protein
LQF30_RS03845	COG0742	ribosomal rna small subunit methyltransferase
LQF30_RS03850	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
LQF30_RS03855	COG1323	Belongs to the UPF0348 family
LQF30_RS03865	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LQF30_RS03875	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LQF30_RS03880	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
LQF30_RS03885	COG0072	phenylalanine-tRNA ligase activity
LQF30_RS03885	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LQF30_RS03890	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LQF30_RS03895	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
LQF30_RS03905	COG1796	DNA polymerase
LQF30_RS03905	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LQF30_RS03910	COG1193	negative regulation of DNA recombination
LQF30_RS03915	COG3118	belongs to the thioredoxin family
LQF30_RS03920	COG0322	excinuclease ABC activity
LQF30_RS03930	COG2009	succinate dehydrogenase
LQF30_RS03935	COG1053	succinate dehydrogenase
LQF30_RS03940	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LQF30_RS03945	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LQF30_RS03950	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
LQF30_RS03985	COG1011	Hydrolase
LQF30_RS03990	COG0454	-acetyltransferase
LQF30_RS03995	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
LQF30_RS04000	COG2001	Belongs to the MraZ family
LQF30_RS04005	COG0275	rRNA processing
LQF30_RS04010	COG4839	cell division protein FtsL
LQF30_RS04015	COG0768	penicillin binding
LQF30_RS04020	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LQF30_RS04025	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LQF30_RS04030	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LQF30_RS04035	COG0849	cell division
LQF30_RS04040	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LQF30_RS04045	COG1496	oxidoreductase activity
LQF30_RS04050	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LQF30_RS04055	COG1799	cell septum assembly
LQF30_RS04060	COG0762	integral membrane protein
LQF30_RS04070	COG3599	regulation of cell shape
LQF30_RS04075	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
LQF30_RS04100	COG3942	CHAP domain
LQF30_RS04100	COG1388	LysM domain
LQF30_RS04105	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
LQF30_RS04110	COG0564	pseudouridine synthase activity
LQF30_RS04115	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
LQF30_RS04120	COG2233	PERMEase
LQF30_RS04125	COG0540	Belongs to the ATCase OTCase family
LQF30_RS04130	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
LQF30_RS04135	COG0505	Belongs to the CarA family
LQF30_RS04140	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
LQF30_RS04145	COG0284	orotidine-5'-phosphate decarboxylase activity
LQF30_RS04150	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LQF30_RS04170	COG0194	GDP metabolic process
LQF30_RS04175	COG1758	RNA polymerase activity
LQF30_RS04180	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LQF30_RS04185	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LQF30_RS04195	COG0242	peptide deformylase activity
LQF30_RS04200	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LQF30_RS04205	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LQF30_RS04205	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LQF30_RS04210	COG0820	rRNA (adenine-C2-)-methyltransferase activity
LQF30_RS04215	COG0631	protein serine/threonine phosphatase activity
LQF30_RS04225	COG1162	GTPase activity
LQF30_RS04230	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LQF30_RS04240	COG0227	Belongs to the bacterial ribosomal protein bL28 family
LQF30_RS04245	COG1302	Protein conserved in bacteria
LQF30_RS04250	COG1461	Dihydroxyacetone kinase
LQF30_RS04255	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LQF30_RS04260	COG1349	DNA-binding transcription factor activity
LQF30_RS04265	COG0416	fatty acid biosynthetic process
LQF30_RS04275	COG1028	Short-chain dehydrogenase reductase Sdr
LQF30_RS04280	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LQF30_RS04285	COG0571	ribonuclease III activity
LQF30_RS04290	COG1196	nuclear chromosome segregation
LQF30_RS04295	COG0552	protein localization to endoplasmic reticulum
LQF30_RS04300	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
LQF30_RS04305	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LQF30_RS04310	COG0228	four-way junction DNA binding
LQF30_RS04315	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
LQF30_RS04320	COG0336	Belongs to the RNA methyltransferase TrmD family
LQF30_RS04325	COG0335	large ribosomal subunit rRNA binding
LQF30_RS04335	COG4485	Bacterial membrane protein, YfhO
LQF30_RS04345	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
LQF30_RS04350	COG0045	succinate-CoA ligase (ADP-forming) activity
LQF30_RS04355	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LQF30_RS04365	COG0758	DNA mediated transformation
LQF30_RS04370	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LQF30_RS04375	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
LQF30_RS04380	COG4974	Belongs to the 'phage' integrase family
LQF30_RS04385	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
LQF30_RS04390	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
LQF30_RS04395	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
LQF30_RS04400	COG0052	Belongs to the universal ribosomal protein uS2 family
LQF30_RS04405	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
LQF30_RS04410	COG0528	UMP kinase activity
LQF30_RS04415	COG0233	cytoplasmic translational termination
LQF30_RS04420	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
LQF30_RS04425	COG4589	Belongs to the CDS family
LQF30_RS04435	COG0442	prolyl-tRNA aminoacylation
LQF30_RS04440	COG2176	DNA-directed DNA polymerase activity
LQF30_RS04445	COG0779	Required for maturation of 30S ribosomal subunits
LQF30_RS04450	COG0195	Participates in both transcription termination and antitermination
LQF30_RS04455	COG2740	Nucleic-acid-binding protein implicated in transcription termination
LQF30_RS04460	COG1358	cellular component organization or biogenesis
LQF30_RS04465	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
LQF30_RS04470	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
LQF30_RS04475	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
LQF30_RS04480	COG0196	riboflavin kinase activity
LQF30_RS04485	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
LQF30_RS04490	COG1185	polyribonucleotide nucleotidyltransferase activity
LQF30_RS04495	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LQF30_RS04500	COG1674	ftsk spoiiie
LQF30_RS04505	COG2188	Transcriptional regulator
LQF30_RS04510	COG0612	Peptidase, M16
LQF30_RS04515	COG0612	Peptidase, M16
LQF30_RS04520	COG0300	oxidoreductase activity
LQF30_RS04535	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LQF30_RS04545	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
LQF30_RS04550	COG1418	mRNA catabolic process
LQF30_RS04560	COG1692	metallophosphoesterase
LQF30_RS04565	COG0674	pyruvate-flavodoxin oxidoreductase activity
LQF30_RS04565	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LQF30_RS04570	COG1013	pyruvate-flavodoxin oxidoreductase activity
LQF30_RS04575	COG4195	phage-related replication protein
LQF30_RS04585	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LQF30_RS04590	COG4550	Control of competence regulator ComK, YlbF/YmcA
LQF30_RS04600	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LQF30_RS04605	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
LQF30_RS04610	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LQF30_RS04615	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LQF30_RS04620	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
LQF30_RS04625	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LQF30_RS04635	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
LQF30_RS04640	COG1923	regulation of RNA biosynthetic process
LQF30_RS04645	COG0386	Belongs to the glutathione peroxidase family
LQF30_RS04650	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LQF30_RS04655	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
LQF30_RS04660	COG0789	Transcriptional regulator
LQF30_RS04665	COG0174	glutamine synthetase
LQF30_RS04715	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LQF30_RS04720	COG1131	(ABC) transporter
LQF30_RS04730	COG4585	Histidine kinase
LQF30_RS04735	COG2197	response regulator
LQF30_RS04745	COG1525	nuclease
LQF30_RS04765	COG0527	aspartate kinase activity
LQF30_RS04770	COG0460	homoserine dehydrogenase
LQF30_RS04775	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
LQF30_RS04780	COG0083	homoserine kinase activity
LQF30_RS04795	COG0833	amino acid
LQF30_RS04800	COG0753	catalase activity
LQF30_RS04810	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LQF30_RS04815	COG0516	GMP reductase activity
LQF30_RS04820	COG2340	Cysteine-rich secretory protein family
LQF30_RS04825	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
LQF30_RS04835	COG4224	UPF0291 protein
LQF30_RS04840	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
LQF30_RS04850	COG4846	Membrane protein involved in cytochrome C biogenesis
LQF30_RS04855	COG0420	3'-5' exonuclease activity
LQF30_RS04860	COG0419	ATPase involved in DNA repair
LQF30_RS04865	COG1970	mechanosensitive ion channel activity
LQF30_RS04870	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LQF30_RS04875	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LQF30_RS04880	COG0824	Thioesterase
LQF30_RS04885	COG4841	protein insertion into membrane
LQF30_RS04890	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
LQF30_RS04895	COG0187	DNA topoisomerase II activity
LQF30_RS04900	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LQF30_RS04905	COG1115	amino acid carrier protein
LQF30_RS04915	COG3711	transcriptional antiterminator
LQF30_RS04920	COG0628	permease
LQF30_RS04925	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LQF30_RS04925	COG0392	lysyltransferase activity
LQF30_RS04940	COG1942	4-Oxalocrotonate Tautomerase
LQF30_RS04945	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LQF30_RS04950	COG0287	Prephenate dehydrogenase
LQF30_RS04955	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LQF30_RS04960	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LQF30_RS04960	COG0512	Glutamine amidotransferase of anthranilate synthase
LQF30_RS04965	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LQF30_RS04970	COG0134	indole-3-glycerol-phosphate synthase activity
LQF30_RS04975	COG0135	phosphoribosylanthranilate isomerase activity
LQF30_RS04980	COG0133	tryptophan synthase activity
LQF30_RS04985	COG0159	tryptophan synthase activity
LQF30_RS04995	COG2348	transferase activity, transferring amino-acyl groups
LQF30_RS05000	COG2348	transferase activity, transferring amino-acyl groups
LQF30_RS05045	COG0704	Plays a role in the regulation of phosphate uptake
LQF30_RS05050	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
LQF30_RS05055	COG0581	inorganic phosphate transmembrane transporter activity
LQF30_RS05060	COG0573	inorganic phosphate transmembrane transporter activity
LQF30_RS05065	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LQF30_RS05070	COG2996	Protein conserved in bacteria
LQF30_RS05075	COG0488	(ABC) transporter
LQF30_RS05080	COG0527	aspartate kinase activity
LQF30_RS05085	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LQF30_RS05090	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LQF30_RS05095	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
LQF30_RS05100	COG2171	N-acyltransferase activity
LQF30_RS05105	COG1473	amidohydrolase
LQF30_RS05125	COG1131	(ABC) transporter
LQF30_RS05140	COG1278	Cold shock
LQF30_RS05150	COG1254	Belongs to the acylphosphatase family
LQF30_RS05160	COG3853	Toxic anion resistance protein (TelA)
LQF30_RS05165	COG1114	Component of the transport system for branched-chain amino acids
LQF30_RS05170	COG4548	von Willebrand factor, type A
LQF30_RS05175	COG0714	Associated with various cellular activities
LQF30_RS05195	COG0508	dehydrogenase complex catalyzes the overall conversion of
LQF30_RS05200	COG0567	Dehydrogenase, E1 component
LQF30_RS05205	COG5002	protein histidine kinase activity
LQF30_RS05210	COG0745	RESPONSE REGULATOR receiver
LQF30_RS05215	COG1349	DNA-binding transcription factor activity
LQF30_RS05220	COG0534	Mate efflux family protein
LQF30_RS05230	COG0395	ABC-type sugar transport system, permease component
LQF30_RS05240	COG4209	transmembrane transport
LQF30_RS05245	COG3842	ATPase activity
LQF30_RS05250	COG0671	phosphoesterase, PA-phosphatase related
LQF30_RS05255	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
LQF30_RS05265	COG0793	Belongs to the peptidase S41A family
LQF30_RS05270	COG4479	Belongs to the UPF0346 family
LQF30_RS05275	COG2190	(PTS) system
LQF30_RS05280	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LQF30_RS05305	COG1136	(ABC) transporter
LQF30_RS05320	COG1413	lyase activity
LQF30_RS05330	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
LQF30_RS05340	COG1196	nuclear chromosome segregation
LQF30_RS05340	COG4372	Transposase
LQF30_RS05340	COG1511	domain protein
LQF30_RS05345	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LQF30_RS05350	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LQF30_RS05360	COG0116	Belongs to the methyltransferase superfamily
LQF30_RS05375	COG3599	regulation of cell shape
LQF30_RS05380	COG4474	Belongs to the UPF0398 family
LQF30_RS05390	COG3331	DNA recombination
LQF30_RS05395	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LQF30_RS05395	COG4499	WXG100 protein secretion system (Wss), protein YukC
LQF30_RS05405	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LQF30_RS05410	COG3935	DnaD domain protein
LQF30_RS05415	COG0017	Asparaginyl-tRNA synthetase
LQF30_RS05420	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LQF30_RS05420	COG1199	ATP-dependent helicase activity
LQF30_RS05425	COG1654	Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon
LQF30_RS05425	COG0340	biotin-[acetyl-CoA-carboxylase] ligase activity
LQF30_RS05430	COG0617	tRNA 3'-terminal CCA addition
LQF30_RS05435	COG0438	transferase activity, transferring glycosyl groups
LQF30_RS05440	COG1694	Mazg nucleotide pyrophosphohydrolase
LQF30_RS05445	COG2738	Putative neutral zinc metallopeptidase
LQF30_RS05450	COG4347	Protein of unknown function (DUF1405)
LQF30_RS05455	COG5582	Belongs to the UPF0302 family
LQF30_RS05465	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
LQF30_RS05470	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
LQF30_RS05475	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
LQF30_RS05480	COG0105	UTP biosynthetic process
LQF30_RS05490	COG2226	methyltransferase
LQF30_RS05505	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
LQF30_RS05510	COG1160	GTP binding
LQF30_RS05515	COG0539	negative regulation of cytoplasmic translation
LQF30_RS05520	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
LQF30_RS05525	COG0252	asparaginase activity
LQF30_RS05530	COG0492	ferredoxin-NADP+ reductase activity
LQF30_RS05535	COG1388	LysM domain
LQF30_RS05540	COG0514	ATP-dependent DNA helicase (RecQ)
LQF30_RS05550	COG1141	Ferredoxin
LQF30_RS05565	COG0745	RESPONSE REGULATOR receiver
LQF30_RS05570	COG1187	pseudouridine synthase activity
LQF30_RS05575	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
LQF30_RS05580	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
LQF30_RS05585	COG1547	Domain of unknown function (DUF309)
LQF30_RS05590	COG4974	Belongs to the 'phage' integrase family
LQF30_RS05595	COG0735	belongs to the Fur family
LQF30_RS05600	COG0494	nUDIX hydrolase
LQF30_RS05605	COG0667	Aldo Keto reductase
LQF30_RS05610	COG1028	Short-chain dehydrogenase reductase Sdr
LQF30_RS05615	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LQF30_RS05620	COG1234	tRNA 3'-trailer cleavage
LQF30_RS05625	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LQF30_RS05635	COG0366	Alpha amylase catalytic
LQF30_RS05640	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
LQF30_RS05645	COG2195	Cleaves the N-terminal amino acid of tripeptides
LQF30_RS05655	COG4129	membrane
LQF30_RS05665	COG0508	dehydrogenase complex catalyzes the overall conversion of
LQF30_RS05670	COG0022	dehydrogenase e1 component
LQF30_RS05675	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LQF30_RS05680	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LQF30_RS05685	COG0497	DNA recombination
LQF30_RS05690	COG1438	arginine binding
LQF30_RS05700	COG1722	exodeoxyribonuclease VII activity
LQF30_RS05705	COG1570	exodeoxyribonuclease VII activity
LQF30_RS05710	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LQF30_RS05715	COG1302	Protein conserved in bacteria
LQF30_RS05720	COG0439	Biotin carboxylase
LQF30_RS05725	COG0511	ligase activity, forming carbon-carbon bonds
LQF30_RS05730	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LQF30_RS05735	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
LQF30_RS05740	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
LQF30_RS05745	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
LQF30_RS05750	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
LQF30_RS05755	COG0006	proline dipeptidase activity
LQF30_RS05770	COG0095	Lipoate-protein ligase
LQF30_RS05775	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LQF30_RS05785	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LQF30_RS05790	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
LQF30_RS05795	COG0404	The glycine cleavage system catalyzes the degradation of glycine
LQF30_RS05800	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
LQF30_RS05820	COG4537	Required for transformation and DNA binding
LQF30_RS05825	COG1459	type II secretion system
LQF30_RS05830	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LQF30_RS05835	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LQF30_RS05840	COG0011	TIGRFAM Protein of
LQF30_RS05845	COG1940	carbohydrate kinase activity
LQF30_RS05850	COG4483	Protein conserved in bacteria
LQF30_RS05860	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LQF30_RS05865	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LQF30_RS05870	COG0768	penicillin binding
LQF30_RS05875	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LQF30_RS05880	COG0735	belongs to the Fur family
LQF30_RS05885	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LQF30_RS05890	COG1121	(ABC) transporter
LQF30_RS05895	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
LQF30_RS05900	COG0513	Belongs to the DEAD box helicase family
LQF30_RS05905	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LQF30_RS05910	COG2384	SAM-dependent methyltransferase
LQF30_RS05915	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LQF30_RS05920	COG0358	DNA primase activity
LQF30_RS05925	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LQF30_RS05930	COG0517	IMP dehydrogenase activity
LQF30_RS05935	COG0423	glycine-tRNA ligase activity
LQF30_RS05940	COG1381	Involved in DNA repair and RecF pathway recombination
LQF30_RS05945	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LQF30_RS05950	COG0295	cytidine deaminase activity
LQF30_RS05955	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LQF30_RS05960	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
LQF30_RS05965	COG1702	phosphate starvation-inducible protein PhoH
LQF30_RS05975	COG4864	UPF0365 protein
LQF30_RS05980	COG1030	water channel activity
LQF30_RS05990	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LQF30_RS05995	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LQF30_RS06000	COG2264	protein methyltransferase activity
LQF30_RS06005	COG0484	heat shock protein binding
LQF30_RS06010	COG0443	Heat shock 70 kDa protein
LQF30_RS06015	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
LQF30_RS06020	COG1420	regulation of RNA biosynthetic process
LQF30_RS06025	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LQF30_RS06030	COG0481	GTPase activity
LQF30_RS06035	COG0268	Binds directly to 16S ribosomal RNA
LQF30_RS06040	COG1466	dna polymerase III delta subunit
LQF30_RS06045	COG2333	competence protein COMEC
LQF30_RS06045	COG0658	competence protein
LQF30_RS06050	COG2131	deaminase
LQF30_RS06060	COG2226	methyltransferase
LQF30_RS06065	COG0799	negative regulation of ribosome biogenesis
LQF30_RS06070	COG1713	HD superfamily hydrolase involved in NAD metabolism
LQF30_RS06075	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
LQF30_RS06080	COG1534	Rna-binding protein
LQF30_RS06085	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
LQF30_RS06090	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LQF30_RS06095	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
LQF30_RS06100	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LQF30_RS06105	COG1914	H( )-stimulated, divalent metal cation uptake system
LQF30_RS06110	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
LQF30_RS06115	COG0439	Biotin carboxylase
LQF30_RS06120	COG0511	ligase activity, forming carbon-carbon bonds
LQF30_RS06125	COG1984	allophanate hydrolase subunit 2
LQF30_RS06130	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LQF30_RS06140	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
LQF30_RS06145	COG0572	uridine kinase
LQF30_RS06150	COG0826	peptidase U32
LQF30_RS06155	COG0826	peptidase U32
LQF30_RS06165	COG3906	Belongs to the UPF0473 family
LQF30_RS06170	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
LQF30_RS06175	COG4472	Bacterial protein of unknown function (DUF965)
LQF30_RS06180	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LQF30_RS06185	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LQF30_RS06195	COG0482	sulfurtransferase activity
LQF30_RS06200	COG1104	cysteine desulfurase activity
LQF30_RS06205	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LQF30_RS06215	COG1959	2 iron, 2 sulfur cluster binding
LQF30_RS06220	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LQF30_RS06230	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LQF30_RS06240	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
LQF30_RS06245	COG0124	histidyl-tRNA synthetase
LQF30_RS06250	COG0860	N-Acetylmuramoyl-L-alanine amidase
LQF30_RS06255	COG1490	D-aminoacyl-tRNA deacylase activity
LQF30_RS06260	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LQF30_RS06265	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LQF30_RS06270	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
LQF30_RS06270	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LQF30_RS06275	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LQF30_RS06275	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LQF30_RS06280	COG1862	Preprotein translocase
LQF30_RS06285	COG0343	queuine tRNA-ribosyltransferase activity
LQF30_RS06290	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
LQF30_RS06295	COG2255	four-way junction helicase activity
LQF30_RS06300	COG0632	four-way junction helicase activity
LQF30_RS06305	COG4492	Belongs to the UPF0735 family
LQF30_RS06310	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
LQF30_RS06315	COG0211	Belongs to the bacterial ribosomal protein bL27 family
LQF30_RS06320	COG2868	ribosomal protein
LQF30_RS06325	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LQF30_RS06355	COG2003	Belongs to the UPF0758 family
LQF30_RS06365	COG0285	dihydrofolate synthase activity
LQF30_RS06370	COG0525	valine-tRNA ligase activity
LQF30_RS06375	COG2818	Glycosylase
LQF30_RS06385	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LQF30_RS06390	COG0113	porphobilinogen synthase activity
LQF30_RS06400	COG0181	hydroxymethylbilane synthase activity
LQF30_RS06410	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
LQF30_RS06415	COG0218	Necessary for normal cell division and for the maintenance of normal septation
LQF30_RS06420	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
LQF30_RS06425	COG0544	peptidyl-prolyl cis-trans isomerase activity
LQF30_RS06435	COG4112	unkown
LQF30_RS06440	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
LQF30_RS06445	COG0291	Belongs to the bacterial ribosomal protein bL35 family
LQF30_RS06450	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
LQF30_RS06455	COG0833	amino acid
LQF30_RS06460	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LQF30_RS06465	COG1484	DNA-dependent DNA replication
LQF30_RS06470	COG3611	Membrane attachment protein
LQF30_RS06475	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
LQF30_RS06480	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LQF30_RS06490	COG0237	dephospho-CoA kinase activity
LQF30_RS06495	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
LQF30_RS06500	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LQF30_RS06500	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LQF30_RS06505	COG5002	protein histidine kinase activity
LQF30_RS06510	COG0745	RESPONSE REGULATOR receiver
LQF30_RS06515	COG0538	isocitrate dehydrogenase activity
LQF30_RS06520	COG0372	Belongs to the citrate synthase family
LQF30_RS06525	COG1113	amino acid transport
LQF30_RS06530	COG0469	pyruvate kinase activity
LQF30_RS06535	COG0205	6-phosphofructokinase activity
LQF30_RS06540	COG0825	malonyl-CoA metabolic process
LQF30_RS06545	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
LQF30_RS06550	COG0281	malic enzyme
LQF30_RS06555	COG0587	DNA-directed DNA polymerase activity
LQF30_RS06560	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LQF30_RS06565	COG4109	DRTGG domain
LQF30_RS06580	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LQF30_RS06585	COG0006	proline dipeptidase activity
LQF30_RS06590	COG0686	Belongs to the AlaDH PNT family
LQF30_RS06595	COG0589	response to stress
LQF30_RS06605	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
LQF30_RS06610	COG0827	DNA restriction-modification system
LQF30_RS06615	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LQF30_RS06625	COG0301	tRNA thio-modification
LQF30_RS06635	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
LQF30_RS06640	COG1956	GAF domain-containing protein
LQF30_RS06645	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
LQF30_RS06650	COG0584	glycerophosphoryl diester phosphodiesterase
LQF30_RS06655	COG1764	response to oxidative stress
LQF30_RS06660	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
LQF30_RS06665	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LQF30_RS06675	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LQF30_RS06675	COG1263	PTS System
LQF30_RS06680	COG0204	Acyl-transferase
LQF30_RS06685	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LQF30_RS06690	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LQF30_RS06700	COG2759	Belongs to the formate--tetrahydrofolate ligase family
LQF30_RS06705	COG1609	Transcriptional regulator
LQF30_RS06710	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
LQF30_RS06710	COG1605	Chorismate mutase
LQF30_RS06720	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
LQF30_RS06725	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
LQF30_RS06730	COG1674	ftsk spoiiie
LQF30_RS06735	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LQF30_RS06740	COG4848	Belongs to the UPF0354 family
LQF30_RS06745	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LQF30_RS06750	COG1363	Peptidase, m42
LQF30_RS06760	COG0220	tRNA (guanine-N7-)-methyltransferase activity
LQF30_RS06765	COG0510	thiamine kinase activity
LQF30_RS06770	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LQF30_RS06775	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LQF30_RS06785	COG1187	pseudouridine synthase activity
LQF30_RS06790	COG2244	polysaccharide biosynthetic process
LQF30_RS06795	COG2081	HI0933 family
LQF30_RS06810	COG0495	leucyl-tRNA aminoacylation
LQF30_RS06815	COG2814	Major facilitator Superfamily
LQF30_RS06820	COG1242	4 iron, 4 sulfur cluster binding
LQF30_RS06825	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LQF30_RS06835	COG2267	carboxylic ester hydrolase activity
LQF30_RS06840	COG0506	proline dehydrogenase activity
LQF30_RS06845	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
LQF30_RS06850	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LQF30_RS06850	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
LQF30_RS06860	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LQF30_RS06860	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LQF30_RS06870	COG4193	domain, Protein
LQF30_RS06870	COG3266	domain, Protein
LQF30_RS06870	COG5632	N-Acetylmuramoyl-L-alanine amidase
LQF30_RS06895	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LQF30_RS06905	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LQF30_RS06910	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LQF30_RS06925	COG0656	L-ascorbic acid biosynthetic process
LQF30_RS06935	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
LQF30_RS06940	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
LQF30_RS06945	COG1506	peptidase
LQF30_RS06950	COG0494	nUDIX hydrolase
LQF30_RS06955	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
LQF30_RS06965	COG0318	PFAM AMP-dependent synthetase and ligase
LQF30_RS07040	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LQF30_RS07045	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
LQF30_RS07050	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
LQF30_RS07055	COG2329	Antibiotic biosynthesis monooxygenase
LQF30_RS07065	COG4473	ABC transporter
LQF30_RS07070	COG1131	(ABC) transporter
LQF30_RS07075	COG0537	adenosine 5'-monophosphoramidase activity
LQF30_RS07090	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LQF30_RS07100	COG3481	metal-dependent phosphohydrolase, HD sub domain
LQF30_RS07110	COG0420	3'-5' exonuclease activity
LQF30_RS07115	COG3679	Belongs to the UPF0342 family
LQF30_RS07120	COG4399	Belongs to the UPF0754 family
LQF30_RS07130	COG2197	response regulator
LQF30_RS07135	COG4585	Histidine kinase
LQF30_RS07135	COG2203	Gaf domain
LQF30_RS07140	COG0564	pseudouridine synthase activity
LQF30_RS07145	COG0114	fumarate hydratase activity
LQF30_RS07170	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LQF30_RS07180	COG1126	abc transporter atp-binding protein
LQF30_RS07355	COG0735	belongs to the Fur family
LQF30_RS07360	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LQF30_RS07365	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LQF30_RS07370	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
LQF30_RS07375	COG4129	membrane
LQF30_RS07385	COG3557	Belongs to the UPF0374 family
LQF30_RS07395	COG1988	membrane-bound metal-dependent
LQF30_RS07405	COG1134	teichoic acid transport
LQF30_RS07405	COG1388	LysM domain
LQF30_RS07415	COG2137	regulation of response to DNA damage stimulus
LQF30_RS07420	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LQF30_RS07425	COG0693	protein deglycase activity
LQF30_RS07435	COG0535	radical SAM domain protein
LQF30_RS07440	COG1607	acyl-coa hydrolase
LQF30_RS07445	COG2309	aminopeptidase activity
LQF30_RS07450	COG4840	Belongs to the UPF0435 family
LQF30_RS07455	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LQF30_RS07465	COG1295	ribonuclease BN
LQF30_RS07470	COG2197	response regulator
LQF30_RS07475	COG4585	Histidine kinase
LQF30_RS07490	COG0024	Methionine aminopeptidase
LQF30_RS07495	COG4129	membrane
LQF30_RS07520	COG1528	Iron-storage protein
LQF30_RS07530	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
LQF30_RS07540	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LQF30_RS07545	COG1597	lipid kinase activity
LQF30_RS07550	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LQF30_RS07555	COG0154	amidase activity
LQF30_RS07560	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
LQF30_RS07565	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LQF30_RS07570	COG4851	CamS sex pheromone cAM373 precursor
LQF30_RS07575	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
LQF30_RS07580	COG0210	DNA helicase
LQF30_RS07585	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
LQF30_RS07590	COG4496	protein, YerC YecD
LQF30_RS07595	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LQF30_RS07605	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
LQF30_RS07610	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
LQF30_RS07615	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LQF30_RS07625	COG0077	Prephenate dehydratase
LQF30_RS07635	COG1335	isochorismatase
LQF30_RS07640	COG1227	inorganic diphosphatase activity
LQF30_RS07645	COG1012	belongs to the aldehyde dehydrogenase family
LQF30_RS07650	COG2706	6-phosphogluconolactonase activity
LQF30_RS07695	COG1131	(ABC) transporter
LQF30_RS07705	COG1131	(ABC) transporter
LQF30_RS07710	COG1725	Transcriptional regulator
LQF30_RS07765	COG0459	protein refolding
LQF30_RS07770	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
LQF30_RS07805	COG3290	protein histidine kinase activity
LQF30_RS07810	COG3279	Response regulator of the LytR AlgR family
LQF30_RS07815	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LQF30_RS07820	COG1621	beta-fructofuranosidase activity
LQF30_RS07825	COG1609	Transcriptional regulator
LQF30_RS07830	COG0004	ammonium transporteR
LQF30_RS07835	COG0425	Belongs to the sulfur carrier protein TusA family
LQF30_RS07840	COG2391	methyltransferase activity
LQF30_RS07850	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
LQF30_RS07855	COG0488	(ABC) transporter
LQF30_RS07860	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
LQF30_RS07865	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
LQF30_RS07870	COG0456	acetyltransferase
LQF30_RS07875	COG1214	PFAM Peptidase M22, glycoprotease
LQF30_RS07880	COG0802	atpase or kinase
LQF30_RS07885	COG0129	dihydroxy-acid dehydratase activity
LQF30_RS07890	COG0028	Belongs to the TPP enzyme family
LQF30_RS07900	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
LQF30_RS07905	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LQF30_RS07910	COG0473	3-isopropylmalate dehydrogenase activity
LQF30_RS07915	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
LQF30_RS07920	COG0066	3-isopropylmalate dehydratase activity
LQF30_RS07925	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LQF30_RS07955	COG3091	SprT-like family
LQF30_RS07960	COG2183	response to ionizing radiation
LQF30_RS07965	COG1191	sigma factor activity
LQF30_RS07980	COG2208	phosphoserine phosphatase activity
LQF30_RS07985	COG2337	Toxic component of a toxin-antitoxin (TA) module
LQF30_RS07995	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LQF30_RS08000	COG0736	holo-[acyl-carrier-protein] synthase activity
LQF30_RS08005	COG3402	PFAM membrane-flanked domain
LQF30_RS08010	COG3428	Bacterial PH domain
LQF30_RS08020	COG0513	Belongs to the DEAD box helicase family
LQF30_RS08025	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LQF30_RS08030	COG1181	Belongs to the D-alanine--D-alanine ligase family
LQF30_RS08035	COG0772	Belongs to the SEDS family
LQF30_RS08050	COG1937	Protein conserved in bacteria
LQF30_RS08055	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LQF30_RS08060	COG1418	mRNA catabolic process
LQF30_RS08065	COG0706	membrane insertase activity
LQF30_RS08070	COG0352	thiamine-phosphate diphosphorylase activity
LQF30_RS08075	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
LQF30_RS08085	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LQF30_RS08090	COG1388	LysM domain
LQF30_RS08095	COG0629	single-stranded DNA binding
LQF30_RS08105	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LQF30_RS08110	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LQF30_RS08120	COG0355	proton-transporting ATP synthase activity, rotational mechanism
LQF30_RS08125	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
LQF30_RS08130	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
LQF30_RS08135	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
LQF30_RS08140	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
LQF30_RS08145	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
LQF30_RS08155	COG0356	it plays a direct role in the translocation of protons across the membrane
LQF30_RS08165	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LQF30_RS08170	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
LQF30_RS08175	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
LQF30_RS08180	COG4475	Protein of unknown function (DUF436)
LQF30_RS08185	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LQF30_RS08190	COG0009	L-threonylcarbamoyladenylate synthase
LQF30_RS08195	COG2890	protein-(glutamine-N5) methyltransferase activity
LQF30_RS08200	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
LQF30_RS08205	COG1435	thymidine kinase activity
LQF30_RS08210	COG0254	rRNA binding
LQF30_RS08215	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LQF30_RS08220	COG1012	belongs to the aldehyde dehydrogenase family
LQF30_RS08225	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
LQF30_RS08230	COG0191	fructose-bisphosphate aldolase activity
LQF30_RS08240	COG0504	CTP synthase activity
LQF30_RS08245	COG3343	RNA polymerase activity
LQF30_RS08255	COG5146	pantothenate kinase activity
LQF30_RS08275	COG1854	S-ribosylhomocysteine lyase activity
LQF30_RS08285	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
LQF30_RS08290	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LQF30_RS08295	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
LQF30_RS08300	COG0813	purine-nucleoside phosphorylase activity
LQF30_RS08305	COG0783	Belongs to the Dps family
LQF30_RS08325	COG1482	cell wall glycoprotein biosynthetic process
LQF30_RS08330	COG0702	epimerase
LQF30_RS08335	COG0640	Transcriptional regulator
LQF30_RS08355	COG0561	phosphatase activity
LQF30_RS08360	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
LQF30_RS08365	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LQF30_RS08375	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LQF30_RS08425	COG0489	protein tyrosine kinase activity
LQF30_RS08430	COG2814	Major facilitator Superfamily
LQF30_RS08450	COG4284	Utp--glucose-1-phosphate uridylyltransferase
LQF30_RS08455	COG1988	membrane-bound metal-dependent
LQF30_RS08465	COG2329	Antibiotic biosynthesis monooxygenase
LQF30_RS08470	COG3314	Sporulation integral membrane protein YlbJ
LQF30_RS08475	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LQF30_RS08480	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LQF30_RS08485	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
LQF30_RS08490	COG3457	Alanine racemase
LQF30_RS08495	COG4264	IucA IucC family
LQF30_RS08500	COG2814	Major facilitator Superfamily
LQF30_RS08505	COG4264	IucA IucC family
LQF30_RS08510	COG1302	Protein conserved in bacteria
LQF30_RS08525	COG0604	alcohol dehydrogenase
LQF30_RS08530	COG2130	NADP-dependent
LQF30_RS08535	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LQF30_RS08545	COG2723	6-phospho-beta-galactosidase activity
LQF30_RS08550	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LQF30_RS08550	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LQF30_RS08555	COG1447	Phosphotransferase system cellobiose-specific component IIA
LQF30_RS08560	COG3684	Belongs to the aldolase LacD family
LQF30_RS08565	COG1105	Belongs to the carbohydrate kinase PfkB family
LQF30_RS08570	COG0698	ribose 5-phosphate isomerase
LQF30_RS08575	COG0698	ribose 5-phosphate isomerase
LQF30_RS08580	COG1349	DNA-binding transcription factor activity
LQF30_RS08585	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
LQF30_RS08590	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
LQF30_RS08595	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
LQF30_RS08600	COG0101	tRNA pseudouridine synthase activity
LQF30_RS08610	COG1122	ATPase activity
LQF30_RS08615	COG1122	ATPase activity
LQF30_RS08620	COG0203	ribosomal protein L17
LQF30_RS08625	COG0202	RNA polymerase activity
LQF30_RS08630	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
LQF30_RS08635	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LQF30_RS08640	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LQF30_RS08645	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
LQF30_RS08650	COG0563	adenylate kinase activity
LQF30_RS08655	COG0201	protein transport
LQF30_RS08660	COG0200	Binds to the 23S rRNA
LQF30_RS08665	COG1841	ribosomal large subunit assembly
LQF30_RS08670	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
LQF30_RS08675	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
LQF30_RS08680	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
LQF30_RS08685	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
LQF30_RS08690	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
LQF30_RS08695	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
LQF30_RS08700	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
LQF30_RS08705	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
LQF30_RS08710	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
LQF30_RS08720	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
LQF30_RS08725	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
LQF30_RS08730	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
LQF30_RS08735	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
LQF30_RS08740	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
LQF30_RS08745	COG0089	rRNA binding
LQF30_RS08750	COG0088	Forms part of the polypeptide exit tunnel
LQF30_RS08755	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
LQF30_RS08770	COG2252	PERMEase
LQF30_RS08775	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LQF30_RS08775	COG0551	DNA topoisomerase type I activity
LQF30_RS08780	COG4975	Glucose uptake
LQF30_RS08785	COG1028	Short-chain dehydrogenase reductase Sdr
LQF30_RS08805	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LQF30_RS08810	COG2348	transferase activity, transferring amino-acyl groups
LQF30_RS08830	COG2814	Major facilitator Superfamily
LQF30_RS08855	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LQF30_RS08860	COG0746	molybdenum cofactor guanylyltransferase activity
LQF30_RS08870	COG0314	molybdopterin synthase activity
LQF30_RS08880	COG0303	'Molybdopterin
LQF30_RS08885	COG0315	cyclic pyranopterin monophosphate synthase activity
LQF30_RS08890	COG0521	Mo-molybdopterin cofactor biosynthetic process
LQF30_RS08895	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LQF30_RS08900	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
LQF30_RS08905	COG4149	molybdate abc transporter
LQF30_RS08910	COG0725	ABC transporter, periplasmic molybdate-binding protein
LQF30_RS08925	COG1268	BioY protein
LQF30_RS08930	COG1957	nucleoside hydrolase
LQF30_RS08935	COG1960	acyl-CoA dehydrogenase activity
LQF30_RS08945	COG0831	urea catabolic process
LQF30_RS08950	COG0832	Belongs to the urease beta subunit family
LQF30_RS08955	COG0804	urea catabolic process
LQF30_RS08960	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
LQF30_RS08965	COG0830	nickel cation binding
LQF30_RS08970	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
LQF30_RS08975	COG0829	nickel cation binding
LQF30_RS09000	COG3942	CHAP domain
LQF30_RS09005	COG1757	Na H antiporter
LQF30_RS09020	COG3942	CHAP domain
LQF30_RS09025	COG2076	Multidrug Resistance protein
LQF30_RS09030	COG2076	Multidrug Resistance protein
LQF30_RS09035	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LQF30_RS09055	COG1316	TRANSCRIPTIONal
LQF30_RS09060	COG0483	inositol monophosphate 1-phosphatase activity
LQF30_RS09065	COG2378	regulation of single-species biofilm formation
LQF30_RS09070	COG1266	CAAX protease self-immunity
LQF30_RS09085	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
LQF30_RS09090	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LQF30_RS09090	COG1263	PTS System
LQF30_RS09100	COG1113	amino acid transport
LQF30_RS09120	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LQF30_RS09130	COG1263	PTS System
LQF30_RS09130	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LQF30_RS09135	COG1737	Transcriptional regulator
LQF30_RS09160	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LQF30_RS09165	COG1028	Short-chain dehydrogenase reductase Sdr
LQF30_RS09170	COG1473	amidohydrolase
LQF30_RS09175	COG0010	Belongs to the arginase family
LQF30_RS09180	COG1266	CAAX protease self-immunity
LQF30_RS09190	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
LQF30_RS09195	COG2258	MOSC domain
LQF30_RS09200	COG2017	converts alpha-aldose to the beta-anomer
LQF30_RS09205	COG1069	ribulokinase activity
LQF30_RS09215	COG2094	Belongs to the DNA glycosylase MPG family
LQF30_RS09235	COG0786	glutamate:sodium symporter activity
LQF30_RS09240	COG1304	FMN binding
LQF30_RS09245	COG0598	Magnesium transport protein CorA
LQF30_RS09260	COG0657	acetylesterase activity
LQF30_RS09270	COG2814	Major facilitator Superfamily
LQF30_RS09275	COG1566	PFAM secretion protein HlyD family protein
LQF30_RS09285	COG2814	Major facilitator Superfamily
LQF30_RS09290	COG4640	response to antibiotic
LQF30_RS09305	COG1136	(ABC) transporter
LQF30_RS09310	COG0577	efflux transmembrane transporter activity
LQF30_RS09315	COG0745	RESPONSE REGULATOR receiver
LQF30_RS09320	COG3850	Histidine kinase
LQF30_RS09320	COG5002	protein histidine kinase activity
LQF30_RS09325	COG0579	oxidoreductase
LQF30_RS09330	COG0438	transferase activity, transferring glycosyl groups
LQF30_RS09335	COG1620	l-lactate permease
LQF30_RS09340	COG0463	Glycosyl transferase, family 2
LQF30_RS09340	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LQF30_RS09350	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LQF30_RS09350	COG0463	Glycosyl transferase, family 2
LQF30_RS09355	COG0456	acetyltransferase
LQF30_RS09360	COG0604	alcohol dehydrogenase
LQF30_RS09395	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LQF30_RS09395	COG1263	PTS System
LQF30_RS09410	COG3871	stress protein (general stress protein 26)
LQF30_RS09430	COG0778	Nitroreductase
LQF30_RS09435	COG1846	Transcriptional regulator
LQF30_RS09440	COG2223	nitrite transmembrane transporter activity
LQF30_RS09445	COG2197	response regulator
LQF30_RS09450	COG4585	Histidine kinase
LQF30_RS09460	COG2181	nitrate reductase activity
LQF30_RS09470	COG1140	nitrate reductase beta subunit
LQF30_RS09475	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
LQF30_RS09485	COG2146	nitrite reductase [NAD(P)H] activity
LQF30_RS09490	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LQF30_RS09500	COG0747	negative chemotaxis
LQF30_RS09510	COG0454	-acetyltransferase
LQF30_RS09515	COG2116	formate transmembrane transporter activity
LQF30_RS09535	COG2348	transferase activity, transferring amino-acyl groups
LQF30_RS09545	COG1126	abc transporter atp-binding protein
LQF30_RS09550	COG0765	amino acid transport
LQF30_RS09555	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LQF30_RS09565	COG0588	phosphoglycerate mutase activity
LQF30_RS09570	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LQF30_RS09585	COG1929	Belongs to the glycerate kinase type-1 family
LQF30_RS09610	COG1113	amino acid transport
LQF30_RS09615	COG0531	amino acid
LQF30_RS09625	COG0706	membrane insertase activity
LQF30_RS09630	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LQF30_RS09640	COG3275	phosphorelay sensor kinase activity
LQF30_RS09645	COG3279	Response regulator of the LytR AlgR family
LQF30_RS09650	COG1380	Effector of murein hydrolase LrgA
LQF30_RS09655	COG1346	cytolysis
LQF30_RS09660	COG1174	glycine betaine transport
LQF30_RS09680	COG1063	alcohol dehydrogenase
LQF30_RS09690	COG0531	amino acid
LQF30_RS09695	COG2272	Belongs to the type-B carboxylesterase lipase family
LQF30_RS09700	COG2814	Major facilitator Superfamily
LQF30_RS09705	COG0390	transport system, permease component
LQF30_RS09710	COG4619	ABC transporter
LQF30_RS09725	COG0069	glutamate synthase activity
LQF30_RS09735	COG1363	Peptidase, m42
LQF30_RS09745	COG1028	Short-chain dehydrogenase reductase Sdr
LQF30_RS09750	COG0248	Ppx GppA phosphatase
LQF30_RS09755	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LQF30_RS09760	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LQF30_RS09765	COG4221	oxidoreductase activity
LQF30_RS09780	COG0556	nucleotide-excision repair
LQF30_RS09785	COG0494	nUDIX hydrolase
LQF30_RS09795	COG1215	transferase activity, transferring glycosyl groups
LQF30_RS09795	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LQF30_RS09800	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LQF30_RS09805	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LQF30_RS09810	COG2610	gluconate transmembrane transporter activity
LQF30_RS09820	COG1802	Transcriptional regulator
LQF30_RS09825	COG2271	Major facilitator Superfamily
LQF30_RS09830	COG0789	Transcriptional regulator
LQF30_RS09850	COG2357	RelA SpoT domain protein
LQF30_RS09855	COG4876	unkown
LQF30_RS09870	COG2271	Major facilitator Superfamily
LQF30_RS09880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LQF30_RS09890	COG2022	thiamine diphosphate biosynthetic process
LQF30_RS09895	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LQF30_RS09900	COG0586	Pfam SNARE associated Golgi protein
LQF30_RS09905	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
LQF30_RS09915	COG3949	Membrane
LQF30_RS09920	COG1012	belongs to the aldehyde dehydrogenase family
LQF30_RS09935	COG2514	catechol 2,3-dioxygenase activity
LQF30_RS09945	COG1012	belongs to the aldehyde dehydrogenase family
LQF30_RS09955	COG0778	Nitroreductase
LQF30_RS09960	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LQF30_RS09970	COG3764	Sortase (surface protein transpeptidase)
LQF30_RS09990	COG1760	l-serine dehydratase
LQF30_RS09995	COG1760	l-serine dehydratase
LQF30_RS10010	COG1070	Carbohydrate kinase
LQF30_RS10025	COG1869	D-ribose catabolic process
LQF30_RS10030	COG4975	Glucose uptake
LQF30_RS10045	COG2843	Capsule synthesis protein
LQF30_RS10055	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
LQF30_RS10070	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LQF30_RS10080	COG1063	alcohol dehydrogenase
LQF30_RS10090	COG2190	(PTS) system
LQF30_RS10090	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LQF30_RS10090	COG1263	PTS System
LQF30_RS10095	COG0028	Belongs to the TPP enzyme family
LQF30_RS10100	COG1346	cytolysis
LQF30_RS10105	COG1380	Effector of murein hydrolase LrgA
LQF30_RS10110	COG0583	DNA-binding transcription factor activity
LQF30_RS10130	COG3425	synthase
LQF30_RS10135	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LQF30_RS10160	COG1012	belongs to the aldehyde dehydrogenase family
LQF30_RS10165	COG1028	Short-chain dehydrogenase reductase Sdr
LQF30_RS10175	COG2217	Heavy metal translocating P-type atpase
LQF30_RS10180	COG2608	mercury ion transmembrane transporter activity
LQF30_RS10190	COG0436	Aminotransferase
LQF30_RS10195	COG3942	CHAP domain
LQF30_RS10205	COG0741	lytic transglycosylase activity
LQF30_RS10220	COG1113	amino acid transport
LQF30_RS10225	COG3001	Fructosamine kinase
LQF30_RS10230	COG0167	dihydroorotate dehydrogenase activity
LQF30_RS10245	COG1636	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LQF30_RS10260	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
LQF30_RS10265	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
LQF30_RS10270	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
LQF30_RS10280	COG3527	Alpha-acetolactate decarboxylase
LQF30_RS10285	COG0028	Belongs to the TPP enzyme family
LQF30_RS10290	COG0039	L-malate dehydrogenase activity
LQF30_RS10295	COG0583	DNA-binding transcription factor activity
LQF30_RS10300	COG0531	amino acid
LQF30_RS10330	COG0446	pyridine nucleotide-disulphide oxidoreductase
LQF30_RS10335	COG3588	fructose-bisphosphate aldolase
LQF30_RS10350	COG0579	oxidoreductase
LQF30_RS10355	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
LQF30_RS10360	COG0574	Belongs to the PEP-utilizing enzyme family
LQF30_RS10360	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
LQF30_RS10365	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LQF30_RS10380	COG1473	amidohydrolase
LQF30_RS10385	COG2303	Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
LQF30_RS10390	COG1012	belongs to the aldehyde dehydrogenase family
LQF30_RS10395	COG1510	regulation of RNA biosynthetic process
LQF30_RS10405	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LQF30_RS10410	COG0602	queuosine metabolic process
LQF30_RS10415	COG1328	CTP reductase activity
LQF30_RS10425	COG0529	Catalyzes the synthesis of activated sulfate
LQF30_RS10430	COG2046	Belongs to the sulfate adenylyltransferase family
LQF30_RS10435	COG0730	response to heat
LQF30_RS10450	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LQF30_RS10455	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
LQF30_RS10460	COG0175	sulfate reduction
LQF30_RS10470	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LQF30_RS10475	COG1846	Transcriptional regulator
LQF30_RS10500	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LQF30_RS10515	COG1136	(ABC) transporter
LQF30_RS10520	COG2205	protein histidine kinase activity
LQF30_RS10535	COG1785	Belongs to the alkaline phosphatase family
LQF30_RS10540	COG0702	epimerase
LQF30_RS10545	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
LQF30_RS10585	COG1397	ADP-ribosylglycohydrolase
LQF30_RS10640	COG3961	Belongs to the TPP enzyme family
LQF30_RS10645	COG2843	Capsule synthesis protein
LQF30_RS10655	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LQF30_RS10665	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LQF30_RS10670	COG2235	arginine
LQF30_RS10675	COG1438	arginine binding
LQF30_RS10680	COG3227	Zinc metalloprotease (Elastase)
LQF30_RS10685	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LQF30_RS10715	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LQF30_RS10715	COG3711	transcriptional antiterminator
LQF30_RS10720	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LQF30_RS10720	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LQF30_RS10720	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LQF30_RS10725	COG1482	cell wall glycoprotein biosynthetic process
LQF30_RS10735	COG1705	Flagellar rod assembly protein muramidase FlgJ
LQF30_RS10735	COG3942	CHAP domain
LQF30_RS10745	COG1764	response to oxidative stress
LQF30_RS10760	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LQF30_RS10765	COG2814	Major facilitator Superfamily
LQF30_RS10790	COG0438	transferase activity, transferring glycosyl groups
LQF30_RS10795	COG0653	protein targeting
LQF30_RS10805	COG1073	alpha beta
LQF30_RS10815	COG0201	protein transport
LQF30_RS10835	COG3639	organic phosphonate transmembrane transporter activity
LQF30_RS10840	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
LQF30_RS10855	COG0737	Belongs to the 5'-nucleotidase family
LQF30_RS10860	COG2814	Major facilitator Superfamily
LQF30_RS10880	COG2162	N-hydroxyarylamine O-acetyltransferase activity
LQF30_RS10885	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
LQF30_RS10885	COG0140	phosphoribosyl-ATP diphosphatase activity
LQF30_RS10890	COG0107	imidazoleglycerol-phosphate synthase activity
LQF30_RS10895	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
LQF30_RS10900	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
LQF30_RS10905	COG0131	Imidazoleglycerol-phosphate dehydratase
LQF30_RS10910	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
LQF30_RS10915	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
LQF30_RS10920	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
LQF30_RS10945	COG0579	oxidoreductase
LQF30_RS10950	COG2353	YceI-like domain
LQF30_RS10955	COG3386	PFAM SMP-30 Gluconolaconase
LQF30_RS10960	COG1054	Belongs to the UPF0176 family
LQF30_RS10965	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
LQF30_RS10990	COG0508	dehydrogenase complex catalyzes the overall conversion of
LQF30_RS10995	COG0022	dehydrogenase e1 component
LQF30_RS11000	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LQF30_RS11005	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LQF30_RS11010	COG0471	metal ion transport
LQF30_RS11020	COG2962	Rard protein
LQF30_RS11035	COG2814	Major facilitator Superfamily
LQF30_RS11065	COG2814	Major facilitator Superfamily
LQF30_RS11075	COG0583	DNA-binding transcription factor activity
LQF30_RS11080	COG2814	Major facilitator Superfamily
LQF30_RS11090	COG3412	dihydroxyacetone kinase, phosphotransfer subunit
LQF30_RS11095	COG1461	Dihydroxyacetone kinase
LQF30_RS11100	COG2376	Dihydroxyacetone kinase
LQF30_RS11110	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
LQF30_RS11115	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
LQF30_RS11130	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LQF30_RS11135	COG0549	Belongs to the carbamate kinase family
LQF30_RS11140	COG1288	antiporter activity
LQF30_RS11175	COG1250	3-hydroxyacyl-CoA dehydrogenase
LQF30_RS11180	COG3246	L-lysine catabolic process to acetate
LQF30_RS11185	COG1309	transcriptional regulator
LQF30_RS11190	COG1114	Component of the transport system for branched-chain amino acids
LQF30_RS11195	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LQF30_RS11200	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LQF30_RS11205	COG1882	Formate acetyltransferase
LQF30_RS11215	COG1124	(ABC) transporter
LQF30_RS11220	COG0444	Belongs to the ABC transporter superfamily
LQF30_RS11230	COG0601	transmembrane transport
LQF30_RS11265	COG1028	Short-chain dehydrogenase reductase Sdr
LQF30_RS11275	COG0431	NADPH-dependent FMN reductase
LQF30_RS11275	COG1053	succinate dehydrogenase
LQF30_RS11275	COG3976	FMN-binding domain protein
LQF30_RS11300	COG0523	cobalamin synthesis protein
LQF30_RS11325	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
LQF30_RS11330	COG0156	8-amino-7-oxononanoate synthase activity
LQF30_RS11335	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LQF30_RS11340	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
LQF30_RS11355	COG1755	Isoprenylcysteine carboxyl methyltransferase
LQF30_RS11365	COG0579	oxidoreductase
LQF30_RS11370	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LQF30_RS11400	COG0561	phosphatase activity
LQF30_RS11405	COG0668	transmembrane transport
LQF30_RS11425	COG0640	Transcriptional regulator
LQF30_RS11445	COG0446	pyridine nucleotide-disulphide oxidoreductase
LQF30_RS11455	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LQF30_RS11460	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LQF30_RS11465	COG0730	response to heat
LQF30_RS11470	COG1937	Protein conserved in bacteria
LQF30_RS11475	COG2210	Belongs to the sulfur carrier protein TusA family
LQF30_RS11480	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LQF30_RS11485	COG1388	LysM domain
LQF30_RS11490	COG2132	Multicopper oxidase
LQF30_RS11495	COG2217	Heavy metal translocating P-type atpase
LQF30_RS11510	COG5002	protein histidine kinase activity
LQF30_RS11515	COG0745	RESPONSE REGULATOR receiver
LQF30_RS11530	COG1131	(ABC) transporter
LQF30_RS11540	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LQF30_RS11695	COG1438	arginine binding
LQF30_RS11700	COG2235	arginine
LQF30_RS11710	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LQF30_RS11715	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
LQF30_RS11720	COG0549	Belongs to the carbamate kinase family
LQF30_RS11820	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
LQF30_RS11825	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LQF30_RS11835	COG4863	YycH protein
LQF30_RS11840	COG5002	protein histidine kinase activity
LQF30_RS11845	COG0745	RESPONSE REGULATOR receiver
LQF30_RS11860	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
LQF30_RS11865	COG0305	Participates in initiation and elongation during chromosome replication
LQF30_RS11870	COG0359	binds to the 23S rRNA
LQF30_RS11875	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
LQF30_RS11885	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LQF30_RS11905	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
LQF30_RS11910	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
LQF30_RS11915	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LQF30_RS11920	COG0187	DNA topoisomerase II activity
LQF30_RS11925	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LQF30_RS11930	COG2501	S4 domain
LQF30_RS11935	COG0592	DNA-directed DNA polymerase activity
LQF30_RS11940	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
LQF30_RS11975	COG1132	(ABC) transporter
LQF30_RS11980	COG1132	(ABC) transporter
LQF30_RS11985	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
LQF30_RS12015	COG1192	Involved in chromosome partitioning
LQF30_RS12070	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system