locus-tag class description JQC88_RS00005 PF00308 Bacterial dnaA protein JQC88_RS00005 PF11638 DnaA N-terminal domain JQC88_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix JQC88_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JQC88_RS00010 PF02767 DNA polymerase III beta subunit, central domain JQC88_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JQC88_RS00020 PF02463 RecF/RecN/SMC N terminal domain JQC88_RS00025 PF01751 Toprim domain JQC88_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus JQC88_RS00025 PF00204 DNA gyrase B JQC88_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A JQC88_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller JQC88_RS00035 PF01256 Carbohydrate kinase JQC88_RS00040 PF02403 Seryl-tRNA synthetase N-terminal domain JQC88_RS00040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JQC88_RS00045 PF03372 Endonuclease/Exonuclease/phosphatase family JQC88_RS00060 PF00561 alpha/beta hydrolase fold JQC88_RS00070 PF02272 DHHA1 domain JQC88_RS00070 PF01368 DHH family JQC88_RS00075 PF03948 Ribosomal protein L9, C-terminal domain JQC88_RS00075 PF01281 Ribosomal protein L9, N-terminal domain JQC88_RS00080 PF00772 DnaB-like helicase N terminal domain JQC88_RS00080 PF03796 DnaB-like helicase C terminal domain JQC88_RS00085 PF00709 Adenylosuccinate synthetase JQC88_RS00100 PF00072 Response regulator receiver domain JQC88_RS00100 PF00486 Transcriptional regulatory protein, C terminal JQC88_RS00105 PF00989 PAS fold JQC88_RS00105 PF00512 His Kinase A (phospho-acceptor) domain JQC88_RS00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS00105 PF00672 HAMP domain JQC88_RS00110 PF07435 YycH protein JQC88_RS00120 PF00753 Metallo-beta-lactamase superfamily JQC88_RS00125 PF02590 Predicted SPOUT methyltransferase JQC88_RS00140 PF13610 DDE domain JQC88_RS00150 PF03009 Glycerophosphoryl diester phosphodiesterase family JQC88_RS00155 PF01575 MaoC like domain JQC88_RS00160 PF00905 Penicillin binding protein transpeptidase domain JQC88_RS00160 PF05223 NTF2-like N-terminal transpeptidase domain JQC88_RS00160 PF03717 Penicillin-binding Protein dimerisation domain JQC88_RS00165 PF05569 BlaR1 peptidase M56 JQC88_RS00165 PF00905 Penicillin binding protein transpeptidase domain JQC88_RS00220 PF17191 RecG wedge domain JQC88_RS00220 PF00270 DEAD/DEAH box helicase JQC88_RS00220 PF13749 Putative ATP-dependent DNA helicase recG C-terminal JQC88_RS00230 PF13686 DsrE/DsrF/DrsH-like family JQC88_RS00235 PF02583 Metal-sensitive transcriptional repressor JQC88_RS00240 PF01925 Sulfite exporter TauE/SafE JQC88_RS00245 PF01451 Low molecular weight phosphotyrosine protein phosphatase JQC88_RS00250 PF02040 Arsenical pump membrane protein JQC88_RS00255 PF01022 Bacterial regulatory protein, arsR family JQC88_RS00260 PF02374 Anion-transporting ATPase JQC88_RS00265 PF06953 Arsenical resistance operon trans-acting repressor ArsD JQC88_RS00270 PF01022 Bacterial regulatory protein, arsR family JQC88_RS00275 PF03773 Predicted permease JQC88_RS00280 PF04507 Csa1 family JQC88_RS00285 PF04507 Csa1 family JQC88_RS00290 PF00924 Mechanosensitive ion channel JQC88_RS00295 PF05116 Sucrose-6F-phosphate phosphohydrolase JQC88_RS00325 PF01207 Dihydrouridine synthase (Dus) JQC88_RS00330 PF06039 Malate:quinone oxidoreductase (Mqo) JQC88_RS00345 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family JQC88_RS00350 PF07690 Major Facilitator Superfamily JQC88_RS00355 PF12833 Helix-turn-helix domain JQC88_RS00355 PF00072 Response regulator receiver domain JQC88_RS00360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS00360 PF06580 Histidine kinase JQC88_RS00410 PF17041 E domain JQC88_RS00410 PF04650 YSIRK type signal peptide JQC88_RS00410 PF00746 LPXTG cell wall anchor motif JQC88_RS00410 PF07501 G5 domain JQC88_RS00425 PF00202 Aminotransferase class-III JQC88_RS00430 PF00155 Aminotransferase class I and II JQC88_RS00435 PF03744 6-carboxyhexanoate--CoA ligase JQC88_RS00445 PF05543 Staphopain peptidase C47 JQC88_RS00445 PF14731 Staphopain proregion JQC88_RS00450 PF04650 YSIRK type signal peptide JQC88_RS00455 PF04507 Csa1 family JQC88_RS00460 PF02492 CobW/HypB/UreG, nucleotide-binding domain JQC88_RS00460 PF07683 Cobalamin synthesis protein cobW C-terminal domain JQC88_RS00480 PF02424 ApbE family JQC88_RS00485 PF00890 FAD binding domain JQC88_RS00485 PF04205 FMN-binding domain JQC88_RS00485 PF03358 NADPH-dependent FMN reductase JQC88_RS00490 PF07690 Major Facilitator Superfamily JQC88_RS00500 PF00005 ABC transporter JQC88_RS00520 PF10100 Staphylopine dehydrogenase JQC88_RS00525 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JQC88_RS00530 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS00535 PF12911 N-terminal TM domain of oligopeptide transport permease C JQC88_RS00535 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS00540 PF00005 ABC transporter JQC88_RS00545 PF00005 ABC transporter JQC88_RS00550 PF07690 Major Facilitator Superfamily JQC88_RS00555 PF01228 Glycine radical JQC88_RS00555 PF02901 Pyruvate formate lyase-like JQC88_RS00560 PF04055 Radical SAM superfamily JQC88_RS00565 PF07687 Peptidase dimerisation domain JQC88_RS00565 PF01546 Peptidase family M20/M25/M40 JQC88_RS00570 PF05525 Branched-chain amino acid transport protein JQC88_RS00575 PF17932 Tetracyclin repressor-like, C-terminal domain JQC88_RS00575 PF00440 Bacterial regulatory proteins, tetR family JQC88_RS00580 PF05853 beta-keto acid cleavage enzyme JQC88_RS00585 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JQC88_RS00585 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JQC88_RS00595 PF00571 CBS domain JQC88_RS00595 PF00005 ABC transporter JQC88_RS00600 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS00605 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JQC88_RS00610 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS00615 PF01476 LysM domain JQC88_RS00615 PF00756 Putative esterase JQC88_RS00620 PF03606 C4-dicarboxylate anaerobic carrier JQC88_RS00625 PF00696 Amino acid kinase family JQC88_RS00630 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JQC88_RS00630 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JQC88_RS00645 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) JQC88_RS00650 PF04055 Radical SAM superfamily JQC88_RS00650 PF06968 Biotin and Thiamin Synthesis associated domain JQC88_RS00655 PF00465 Iron-containing alcohol dehydrogenase JQC88_RS00660 PF02733 Dak1 domain JQC88_RS00665 PF02734 DAK2 domain JQC88_RS00670 PF03610 PTS system fructose IIA component JQC88_RS00685 PF07690 Major Facilitator Superfamily JQC88_RS00700 PF00975 Thioesterase domain JQC88_RS00700 PF00550 Phosphopantetheine attachment site JQC88_RS00700 PF00501 AMP-binding enzyme JQC88_RS00700 PF13193 AMP-binding enzyme C-terminal domain JQC88_RS00700 PF00668 Condensation domain JQC88_RS00710 PF04650 YSIRK type signal peptide JQC88_RS00715 PF00083 Sugar (and other) transporter JQC88_RS00730 PF00892 EamA-like transporter family JQC88_RS00735 PF09084 NMT1/THI5 like JQC88_RS00740 PF00939 Sodium:sulfate symporter transmembrane region JQC88_RS00745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQC88_RS00745 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS00750 PF00676 Dehydrogenase E1 component JQC88_RS00755 PF02780 Transketolase, C-terminal domain JQC88_RS00755 PF02779 Transketolase, pyrimidine binding domain JQC88_RS00760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JQC88_RS00760 PF02817 e3 binding domain JQC88_RS00760 PF00364 Biotin-requiring enzyme JQC88_RS00775 PF02028 BCCT, betaine/carnitine/choline family transporter JQC88_RS00785 PF01470 Pyroglutamyl peptidase JQC88_RS00790 PF12368 Rhodanase C-terminal JQC88_RS00790 PF17773 UPF0176 acylphosphatase like domain JQC88_RS00790 PF00581 Rhodanese-like domain JQC88_RS00795 PF08450 SMP-30/Gluconolactonase/LRE-like region JQC88_RS00800 PF04264 YceI-like domain JQC88_RS00805 PF06039 Malate:quinone oxidoreductase (Mqo) JQC88_RS00815 PF13393 Histidyl-tRNA synthetase JQC88_RS00820 PF01634 ATP phosphoribosyltransferase JQC88_RS00825 PF00815 Histidinol dehydrogenase JQC88_RS00830 PF00475 Imidazoleglycerol-phosphate dehydratase JQC88_RS00835 PF00117 Glutamine amidotransferase class-I JQC88_RS00840 PF00977 Histidine biosynthesis protein JQC88_RS00845 PF00977 Histidine biosynthesis protein JQC88_RS00850 PF01502 Phosphoribosyl-AMP cyclohydrolase JQC88_RS00850 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JQC88_RS00855 PF00797 N-acetyltransferase JQC88_RS00860 PF04650 YSIRK type signal peptide JQC88_RS00875 PF07690 Major Facilitator Superfamily JQC88_RS00880 PF02872 5'-nucleotidase, C-terminal domain JQC88_RS00880 PF00149 Calcineurin-like phosphoesterase JQC88_RS00895 PF00005 ABC transporter JQC88_RS00900 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS00905 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS00915 PF00746 LPXTG cell wall anchor motif JQC88_RS00920 PF00344 SecY translocase JQC88_RS00925 PF16993 Accessory Sec system protein Asp1 JQC88_RS00930 PF16929 Accessory Sec system GspB-transporter JQC88_RS00940 PF07517 SecA DEAD-like domain JQC88_RS00940 PF01043 SecA preprotein cross-linking domain JQC88_RS00940 PF07516 SecA Wing and Scaffold domain JQC88_RS00945 PF00534 Glycosyl transferases group 1 JQC88_RS00960 PF01641 SelR domain JQC88_RS00960 PF01625 Peptide methionine sulfoxide reductase JQC88_RS00970 PF07690 Major Facilitator Superfamily JQC88_RS00990 PF02566 OsmC-like protein JQC88_RS00995 PF01468 GA module JQC88_RS01000 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JQC88_RS01000 PF05257 CHAP domain JQC88_RS01005 PF01061 ABC-2 type transporter JQC88_RS01010 PF01238 Phosphomannose isomerase type I JQC88_RS01015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JQC88_RS01015 PF02378 Phosphotransferase system, EIIC JQC88_RS01015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JQC88_RS01020 PF08279 HTH domain JQC88_RS01020 PF05043 Mga helix-turn-helix domain JQC88_RS01020 PF00874 PRD domain JQC88_RS01020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JQC88_RS01055 PF01546 Peptidase family M20/M25/M40 JQC88_RS01055 PF07687 Peptidase dimerisation domain JQC88_RS01060 PF03413 Peptidase propeptide and YPEB domain JQC88_RS01060 PF02868 Thermolysin metallopeptidase, alpha-helical domain JQC88_RS01060 PF07504 Fungalysin/Thermolysin Propeptide Motif JQC88_RS01060 PF01447 Thermolysin metallopeptidase, catalytic domain JQC88_RS01065 PF02863 Arginine repressor, C-terminal domain JQC88_RS01065 PF01316 Arginine repressor, DNA binding domain JQC88_RS01075 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JQC88_RS01075 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JQC88_RS01080 PF13520 Amino acid permease JQC88_RS01085 PF13545 Crp-like helix-turn-helix domain JQC88_RS01085 PF00027 Cyclic nucleotide-binding domain JQC88_RS01095 PF09587 Bacterial capsule synthesis protein PGA_cap JQC88_RS01100 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQC88_RS01100 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQC88_RS01100 PF00205 Thiamine pyrophosphate enzyme, central domain JQC88_RS01110 PF01797 Transposase IS200 like JQC88_RS01120 PF00239 Resolvase, N terminal domain JQC88_RS01120 PF02796 Helix-turn-helix domain of resolvase JQC88_RS01130 PF00916 Sulfate permease family JQC88_RS01130 PF01740 STAS domain JQC88_RS01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQC88_RS01155 PF03466 LysR substrate binding domain JQC88_RS01175 PF01446 Replication protein JQC88_RS01195 PF00403 Heavy-metal-associated domain JQC88_RS01200 PF01022 Bacterial regulatory protein, arsR family JQC88_RS01215 PF01022 Bacterial regulatory protein, arsR family JQC88_RS01235 PF03747 ADP-ribosylglycohydrolase JQC88_RS01260 PF05908 Poly-gamma-glutamate hydrolase JQC88_RS01270 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JQC88_RS01275 PF13460 NAD(P)H-binding JQC88_RS01275 PF11066 Protein of unknown function (DUF2867) JQC88_RS01280 PF00245 Alkaline phosphatase JQC88_RS01290 PF00486 Transcriptional regulatory protein, C terminal JQC88_RS01290 PF00072 Response regulator receiver domain JQC88_RS01295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS01300 PF00005 ABC transporter JQC88_RS01315 PF00474 Sodium:solute symporter family JQC88_RS01340 PF01047 MarR family JQC88_RS01345 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS01345 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQC88_RS01350 PF00255 Glutathione peroxidase JQC88_RS01355 PF01507 Phosphoadenosine phosphosulfate reductase family JQC88_RS01360 PF00667 FAD binding domain JQC88_RS01360 PF00175 Oxidoreductase NAD-binding domain JQC88_RS01360 PF00258 Flavodoxin JQC88_RS01365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JQC88_RS01365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JQC88_RS01370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQC88_RS01375 PF14824 Sirohaem biosynthesis protein central JQC88_RS01380 PF01925 Sulfite exporter TauE/SafE JQC88_RS01385 PF01747 ATP-sulfurylase JQC88_RS01385 PF14306 PUA-like domain JQC88_RS01400 PF13597 Anaerobic ribonucleoside-triphosphate reductase JQC88_RS01400 PF03477 ATP cone domain JQC88_RS01410 PF03605 Anaerobic c4-dicarboxylate membrane transporter JQC88_RS01415 PF02028 BCCT, betaine/carnitine/choline family transporter JQC88_RS01425 PF00171 Aldehyde dehydrogenase family JQC88_RS01430 PF00732 GMC oxidoreductase JQC88_RS01430 PF05199 GMC oxidoreductase JQC88_RS01435 PF07687 Peptidase dimerisation domain JQC88_RS01435 PF01546 Peptidase family M20/M25/M40 JQC88_RS01450 PF13193 AMP-binding enzyme C-terminal domain JQC88_RS01450 PF00501 AMP-binding enzyme JQC88_RS01455 PF00391 PEP-utilising enzyme, mobile domain JQC88_RS01455 PF02896 PEP-utilising enzyme, TIM barrel domain JQC88_RS01455 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JQC88_RS01460 PF03618 Kinase/pyrophosphorylase JQC88_RS01465 PF06039 Malate:quinone oxidoreductase (Mqo) JQC88_RS01475 PF00274 Fructose-bisphosphate aldolase class-I JQC88_RS01480 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS01480 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQC88_RS01505 PF00202 Aminotransferase class-III JQC88_RS01510 PF13520 Amino acid permease JQC88_RS01515 PF03466 LysR substrate binding domain JQC88_RS01515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQC88_RS01520 PF00056 lactate/malate dehydrogenase, NAD binding domain JQC88_RS01520 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JQC88_RS01525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQC88_RS01525 PF00205 Thiamine pyrophosphate enzyme, central domain JQC88_RS01525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQC88_RS01530 PF03306 Alpha-acetolactate decarboxylase JQC88_RS01535 PF02558 Ketopantoate reductase PanE/ApbA JQC88_RS01535 PF08546 Ketopantoate reductase PanE/ApbA C terminal JQC88_RS01540 PF02548 Ketopantoate hydroxymethyltransferase JQC88_RS01545 PF02569 Pantoate-beta-alanine ligase JQC88_RS01550 PF02261 Aspartate decarboxylase JQC88_RS01565 PF02677 Epoxyqueuosine reductase QueH JQC88_RS01580 PF01180 Dihydroorotate dehydrogenase JQC88_RS01590 PF00324 Amino acid permease JQC88_RS01600 PF03976 Polyphosphate kinase 2 (PPK2) JQC88_RS01605 PF06737 Transglycosylase-like domain JQC88_RS01610 PF01757 Acyltransferase family JQC88_RS01615 PF05257 CHAP domain JQC88_RS01620 PF00155 Aminotransferase class I and II JQC88_RS01630 PF00403 Heavy-metal-associated domain JQC88_RS01635 PF00403 Heavy-metal-associated domain JQC88_RS01650 PF00171 Aldehyde dehydrogenase family JQC88_RS01660 PF07664 Ferrous iron transport protein B C terminus JQC88_RS01660 PF07670 Nucleoside recognition JQC88_RS01660 PF17910 FeoB cytosolic helical domain JQC88_RS01660 PF02421 Ferrous iron transport protein B JQC88_RS01675 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JQC88_RS01675 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JQC88_RS01680 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal JQC88_RS01680 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal JQC88_RS01685 PF00368 Hydroxymethylglutaryl-coenzyme A reductase JQC88_RS01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQC88_RS01700 PF03466 LysR substrate binding domain JQC88_RS01705 PF03788 LrgA family JQC88_RS01710 PF04172 LrgB-like family JQC88_RS01715 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQC88_RS01715 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQC88_RS01715 PF00205 Thiamine pyrophosphate enzyme, central domain JQC88_RS01720 PF02378 Phosphotransferase system, EIIC JQC88_RS01720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JQC88_RS01720 PF00367 phosphotransferase system, EIIB JQC88_RS01730 PF00107 Zinc-binding dehydrogenase JQC88_RS01730 PF13823 Alcohol dehydrogenase GroES-associated JQC88_RS01730 PF08240 Alcohol dehydrogenase GroES-like domain JQC88_RS01740 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JQC88_RS01740 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JQC88_RS01745 PF07859 alpha/beta hydrolase fold JQC88_RS01755 PF08245 Mur ligase middle domain JQC88_RS01760 PF14102 Capsule biosynthesis CapC JQC88_RS01765 PF09587 Bacterial capsule synthesis protein PGA_cap JQC88_RS01780 PF06800 Sugar transport protein JQC88_RS01785 PF05025 RbsD / FucU transport protein family JQC88_RS01790 PF00294 pfkB family carbohydrate kinase JQC88_RS01800 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JQC88_RS01800 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JQC88_RS01815 PF01842 ACT domain JQC88_RS01815 PF03315 Serine dehydratase beta chain JQC88_RS01820 PF03313 Serine dehydratase alpha chain JQC88_RS01840 PF04203 Sortase domain JQC88_RS01855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JQC88_RS01855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JQC88_RS01860 PF00881 Nitroreductase family JQC88_RS01865 PF00171 Aldehyde dehydrogenase family JQC88_RS01875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JQC88_RS01890 PF00171 Aldehyde dehydrogenase family JQC88_RS01905 PF06874 Firmicute fructose-1,6-bisphosphatase JQC88_RS01910 PF09335 SNARE associated Golgi protein JQC88_RS01915 PF00899 ThiF family JQC88_RS01920 PF05690 Thiazole biosynthesis protein ThiG JQC88_RS01930 PF01266 FAD dependent oxidoreductase JQC88_RS01940 PF07690 Major Facilitator Superfamily JQC88_RS01955 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) JQC88_RS01960 PF04607 Region found in RelA / SpoT proteins JQC88_RS01970 PF00561 alpha/beta hydrolase fold JQC88_RS01975 PF13411 MerR HTH family regulatory protein JQC88_RS01980 PF07690 Major Facilitator Superfamily JQC88_RS01985 PF07729 FCD domain JQC88_RS01985 PF00392 Bacterial regulatory proteins, gntR family JQC88_RS01990 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JQC88_RS01990 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JQC88_RS01995 PF02447 GntP family permease JQC88_RS02000 PF00483 Nucleotidyl transferase JQC88_RS02005 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JQC88_RS02005 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JQC88_RS02005 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JQC88_RS02005 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JQC88_RS02010 PF09318 Glycosyl transferase 1 domain A JQC88_RS02010 PF00534 Glycosyl transferases group 1 JQC88_RS02015 PF02976 DNA mismatch repair enzyme MutH JQC88_RS02020 PF00145 C-5 cytosine-specific DNA methylase JQC88_RS02035 PF00106 short chain dehydrogenase JQC88_RS02040 PF07687 Peptidase dimerisation domain JQC88_RS02040 PF01546 Peptidase family M20/M25/M40 JQC88_RS02045 PF02503 Polyphosphate kinase middle domain JQC88_RS02045 PF13090 Polyphosphate kinase C-terminal domain 2 JQC88_RS02045 PF17941 Polyphosphate kinase C-terminal domain 1 JQC88_RS02045 PF13089 Polyphosphate kinase N-terminal domain JQC88_RS02065 PF05343 M42 glutamyl aminopeptidase JQC88_RS02070 PF06998 Protein of unknown function (DUF1307) JQC88_RS02075 PF01645 Conserved region in glutamate synthase JQC88_RS02095 PF00005 ABC transporter JQC88_RS02100 PF03649 Uncharacterised protein family (UPF0014) JQC88_RS02105 PF07690 Major Facilitator Superfamily JQC88_RS02110 PF00135 Carboxylesterase family JQC88_RS02115 PF13520 Amino acid permease JQC88_RS02125 PF08240 Alcohol dehydrogenase GroES-like domain JQC88_RS02125 PF00107 Zinc-binding dehydrogenase JQC88_RS02130 PF00005 ABC transporter JQC88_RS02130 PF00571 CBS domain JQC88_RS02135 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS02140 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JQC88_RS02145 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS02150 PF04172 LrgB-like family JQC88_RS02155 PF03788 LrgA family JQC88_RS02160 PF04397 LytTr DNA-binding domain JQC88_RS02160 PF00072 Response regulator receiver domain JQC88_RS02165 PF13492 GAF domain JQC88_RS02165 PF07694 5TMR of 5TMR-LYT JQC88_RS02165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS02165 PF06580 Histidine kinase JQC88_RS02170 PF07690 Major Facilitator Superfamily JQC88_RS02175 PF08546 Ketopantoate reductase PanE/ApbA C terminal JQC88_RS02175 PF02558 Ketopantoate reductase PanE/ApbA JQC88_RS02180 PF02096 60Kd inner membrane protein JQC88_RS02185 PF00144 Beta-lactamase JQC88_RS02190 PF13520 Amino acid permease JQC88_RS02195 PF00324 Amino acid permease JQC88_RS02210 PF07690 Major Facilitator Superfamily JQC88_RS02220 PF02595 Glycerate kinase family JQC88_RS02235 PF01545 Cation efflux family JQC88_RS02235 PF16916 Dimerisation domain of Zinc Transporter JQC88_RS02240 PF00300 Histidine phosphatase superfamily (branch 1) JQC88_RS02250 PF00497 Bacterial extracellular solute-binding proteins, family 3 JQC88_RS02255 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS02260 PF00005 ABC transporter JQC88_RS02270 PF02388 FemAB family JQC88_RS02295 PF00583 Acetyltransferase (GNAT) family JQC88_RS02305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JQC88_RS02315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JQC88_RS02315 PF04324 BFD-like [2Fe-2S] binding domain JQC88_RS02315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JQC88_RS02315 PF18267 Rubredoxin NAD+ reductase C-terminal domain JQC88_RS02315 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS02320 PF00355 Rieske [2Fe-2S] domain JQC88_RS02325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQC88_RS02330 PF14710 Respiratory nitrate reductase alpha N-terminal JQC88_RS02330 PF00384 Molybdopterin oxidoreductase JQC88_RS02330 PF01568 Molydopterin dinucleotide binding domain JQC88_RS02335 PF14711 Respiratory nitrate reductase beta C-terminal JQC88_RS02335 PF13247 4Fe-4S dicluster domain JQC88_RS02345 PF02665 Nitrate reductase gamma subunit JQC88_RS02355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS02355 PF07730 Histidine kinase JQC88_RS02360 PF00072 Response regulator receiver domain JQC88_RS02360 PF00196 Bacterial regulatory proteins, luxR family JQC88_RS02365 PF07690 Major Facilitator Superfamily JQC88_RS02370 PF01047 MarR family JQC88_RS02375 PF00881 Nitroreductase family JQC88_RS02385 PF00375 Sodium:dicarboxylate symporter family JQC88_RS02395 PF16242 Pyridoxamine 5'-phosphate oxidase like JQC88_RS02410 PF00367 phosphotransferase system, EIIB JQC88_RS02410 PF02378 Phosphotransferase system, EIIC JQC88_RS02445 PF00107 Zinc-binding dehydrogenase JQC88_RS02445 PF08240 Alcohol dehydrogenase GroES-like domain JQC88_RS02450 PF00583 Acetyltransferase (GNAT) family JQC88_RS02455 PF00535 Glycosyl transferase family 2 JQC88_RS02455 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JQC88_RS02465 PF00535 Glycosyl transferase family 2 JQC88_RS02465 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JQC88_RS02470 PF02652 L-lactate permease JQC88_RS02475 PF00534 Glycosyl transferases group 1 JQC88_RS02475 PF13439 Glycosyltransferase Family 4 JQC88_RS02480 PF06039 Malate:quinone oxidoreductase (Mqo) JQC88_RS02485 PF00512 His Kinase A (phospho-acceptor) domain JQC88_RS02485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS02485 PF00672 HAMP domain JQC88_RS02490 PF00486 Transcriptional regulatory protein, C terminal JQC88_RS02490 PF00072 Response regulator receiver domain JQC88_RS02495 PF02687 FtsX-like permease family JQC88_RS02500 PF00005 ABC transporter JQC88_RS02510 PF12802 MarR family JQC88_RS02515 PF13240 zinc-ribbon domain JQC88_RS02520 PF07690 Major Facilitator Superfamily JQC88_RS02535 PF07690 Major Facilitator Superfamily JQC88_RS02545 PF07859 alpha/beta hydrolase fold JQC88_RS02545 PF00934 PE family JQC88_RS02560 PF01544 CorA-like Mg2+ transporter protein JQC88_RS02565 PF01070 FMN-dependent dehydrogenase JQC88_RS02570 PF03616 Sodium/glutamate symporter JQC88_RS02590 PF02245 Methylpurine-DNA glycosylase (MPG) JQC88_RS02600 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JQC88_RS02600 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JQC88_RS02605 PF01263 Aldose 1-epimerase JQC88_RS02610 PF03473 MOSC domain JQC88_RS02615 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JQC88_RS02625 PF02517 CPBP intramembrane metalloprotease JQC88_RS02630 PF00491 Arginase family JQC88_RS02635 PF01546 Peptidase family M20/M25/M40 JQC88_RS02635 PF07687 Peptidase dimerisation domain JQC88_RS02645 PF01613 Flavin reductase like domain JQC88_RS02675 PF01418 Helix-turn-helix domain, rpiR family JQC88_RS02675 PF01380 SIS domain JQC88_RS02680 PF02378 Phosphotransferase system, EIIC JQC88_RS02680 PF00367 phosphotransferase system, EIIB JQC88_RS02690 PF13419 Haloacid dehalogenase-like hydrolase JQC88_RS02710 PF00324 Amino acid permease JQC88_RS02720 PF00367 phosphotransferase system, EIIB JQC88_RS02720 PF02378 Phosphotransferase system, EIIC JQC88_RS02725 PF01380 SIS domain JQC88_RS02740 PF02517 CPBP intramembrane metalloprotease JQC88_RS02745 PF13280 WYL domain JQC88_RS02745 PF08279 HTH domain JQC88_RS02750 PF00459 Inositol monophosphatase family JQC88_RS02755 PF03816 Cell envelope-related transcriptional attenuator domain JQC88_RS02765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JQC88_RS02765 PF13457 GW (Gly-Tryp) dipeptide domain JQC88_RS02770 PF01494 FAD binding domain JQC88_RS02775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JQC88_RS02775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JQC88_RS02780 PF00893 Small Multidrug Resistance protein JQC88_RS02785 PF00893 Small Multidrug Resistance protein JQC88_RS02790 PF05257 CHAP domain JQC88_RS02800 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain JQC88_RS02800 PF02558 Ketopantoate reductase PanE/ApbA JQC88_RS02805 PF03553 Na+/H+ antiporter family JQC88_RS02810 PF05257 CHAP domain JQC88_RS02835 PF01774 UreD urease accessory protein JQC88_RS02840 PF02492 CobW/HypB/UreG, nucleotide-binding domain JQC88_RS02845 PF01730 UreF JQC88_RS02850 PF05194 UreE urease accessory protein, C-terminal domain JQC88_RS02850 PF02814 UreE urease accessory protein, N-terminal domain JQC88_RS02855 PF01979 Amidohydrolase family JQC88_RS02855 PF00449 Urease alpha-subunit, N-terminal domain JQC88_RS02860 PF00699 Urease beta subunit JQC88_RS02865 PF00547 Urease, gamma subunit JQC88_RS02875 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JQC88_RS02875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JQC88_RS02875 PF02770 Acyl-CoA dehydrogenase, middle domain JQC88_RS02880 PF01156 Inosine-uridine preferring nucleoside hydrolase JQC88_RS02885 PF02632 BioY family JQC88_RS02905 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS02910 PF03459 TOBE domain JQC88_RS02910 PF00005 ABC transporter JQC88_RS02915 PF00899 ThiF family JQC88_RS02920 PF00994 Probable molybdopterin binding domain JQC88_RS02925 PF01967 MoaC family JQC88_RS02930 PF03454 MoeA C-terminal region (domain IV) JQC88_RS02930 PF00994 Probable molybdopterin binding domain JQC88_RS02930 PF03453 MoeA N-terminal region (domain I and II) JQC88_RS02940 PF02391 MoaE protein JQC88_RS02945 PF02597 ThiS family JQC88_RS02950 PF12804 MobA-like NTP transferase domain JQC88_RS02955 PF04055 Radical SAM superfamily JQC88_RS02955 PF06463 Molybdenum Cofactor Synthesis C JQC88_RS02960 PF01047 MarR family JQC88_RS02980 PF01047 MarR family JQC88_RS02990 PF02388 FemAB family JQC88_RS02995 PF00873 AcrB/AcrD/AcrF family JQC88_RS03020 PF06800 Sugar transport protein JQC88_RS03025 PF01131 DNA topoisomerase JQC88_RS03025 PF01751 Toprim domain JQC88_RS03030 PF00860 Permease family JQC88_RS03040 PF00338 Ribosomal protein S10p/S20e JQC88_RS03045 PF00297 Ribosomal protein L3 JQC88_RS03050 PF00573 Ribosomal protein L4/L1 family JQC88_RS03055 PF00276 Ribosomal protein L23 JQC88_RS03060 PF00181 Ribosomal Proteins L2, RNA binding domain JQC88_RS03060 PF03947 Ribosomal Proteins L2, C-terminal domain JQC88_RS03065 PF00203 Ribosomal protein S19 JQC88_RS03070 PF00237 Ribosomal protein L22p/L17e JQC88_RS03075 PF07650 KH domain JQC88_RS03075 PF00189 Ribosomal protein S3, C-terminal domain JQC88_RS03080 PF00252 Ribosomal protein L16p/L10e JQC88_RS03085 PF00831 Ribosomal L29 protein JQC88_RS03090 PF00366 Ribosomal protein S17 JQC88_RS03095 PF00238 Ribosomal protein L14p/L23e JQC88_RS03100 PF00467 KOW motif JQC88_RS03100 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JQC88_RS03105 PF00281 Ribosomal protein L5 JQC88_RS03105 PF00673 ribosomal L5P family C-terminus JQC88_RS03110 PF00253 Ribosomal protein S14p/S29e JQC88_RS03115 PF00410 Ribosomal protein S8 JQC88_RS03120 PF00347 Ribosomal protein L6 JQC88_RS03125 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JQC88_RS03130 PF00333 Ribosomal protein S5, N-terminal domain JQC88_RS03130 PF03719 Ribosomal protein S5, C-terminal domain JQC88_RS03135 PF00327 Ribosomal protein L30p/L7e JQC88_RS03140 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JQC88_RS03145 PF00344 SecY translocase JQC88_RS03150 PF05191 Adenylate kinase, active site lid JQC88_RS03155 PF01176 Translation initiation factor 1A / IF-1 JQC88_RS03160 PF00444 Ribosomal protein L36 JQC88_RS03165 PF00416 Ribosomal protein S13/S18 JQC88_RS03170 PF00411 Ribosomal protein S11 JQC88_RS03175 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JQC88_RS03175 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JQC88_RS03175 PF01000 RNA polymerase Rpb3/RpoA insert domain JQC88_RS03180 PF01196 Ribosomal protein L17 JQC88_RS03185 PF00005 ABC transporter JQC88_RS03190 PF00005 ABC transporter JQC88_RS03195 PF02361 Cobalt transport protein JQC88_RS03200 PF01416 tRNA pseudouridine synthase JQC88_RS03205 PF00572 Ribosomal protein L13 JQC88_RS03210 PF00380 Ribosomal protein S9/S16 JQC88_RS03215 PF02146 Sir2 family JQC88_RS03220 PF08220 DeoR-like helix-turn-helix domain JQC88_RS03220 PF00455 DeoR C terminal sensor domain JQC88_RS03225 PF02502 Ribose/Galactose Isomerase JQC88_RS03230 PF02502 Ribose/Galactose Isomerase JQC88_RS03235 PF00294 pfkB family carbohydrate kinase JQC88_RS03240 PF01791 DeoC/LacD family aldolase JQC88_RS03245 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JQC88_RS03250 PF02378 Phosphotransferase system, EIIC JQC88_RS03250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JQC88_RS03255 PF00232 Glycosyl hydrolase family 1 JQC88_RS03265 PF00296 Luciferase-like monooxygenase JQC88_RS03270 PF00107 Zinc-binding dehydrogenase JQC88_RS03270 PF16884 N-terminal domain of oxidoreductase JQC88_RS03275 PF08240 Alcohol dehydrogenase GroES-like domain JQC88_RS03275 PF00107 Zinc-binding dehydrogenase JQC88_RS03290 PF03780 Asp23 family, cell envelope-related function JQC88_RS03295 PF04183 IucA / IucC family JQC88_RS03295 PF06276 Ferric iron reductase FhuF-like transporter JQC88_RS03300 PF05977 Transmembrane secretion effector JQC88_RS03305 PF06276 Ferric iron reductase FhuF-like transporter JQC88_RS03305 PF04183 IucA / IucC family JQC88_RS03310 PF01168 Alanine racemase, N-terminal domain JQC88_RS03315 PF01497 Periplasmic binding protein JQC88_RS03320 PF01032 FecCD transport family JQC88_RS03325 PF01032 FecCD transport family JQC88_RS03330 PF07670 Nucleoside recognition JQC88_RS03335 PF03992 Antibiotic biosynthesis monooxygenase JQC88_RS03345 PF04307 LexA-binding, inner membrane-associated putative hydrolase JQC88_RS03350 PF01704 UTP--glucose-1-phosphate uridylyltransferase JQC88_RS03360 PF07690 Major Facilitator Superfamily JQC88_RS03365 PF17080 Multidrug Resistance efflux pump JQC88_RS03370 PF07690 Major Facilitator Superfamily JQC88_RS03375 PF10609 NUBPL iron-transfer P-loop NTPase JQC88_RS03425 PF02457 DisA bacterial checkpoint controller nucleotide-binding JQC88_RS03435 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JQC88_RS03435 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JQC88_RS03435 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JQC88_RS03435 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JQC88_RS03440 PF01380 SIS domain JQC88_RS03460 PF01545 Cation efflux family JQC88_RS03460 PF16916 Dimerisation domain of Zinc Transporter JQC88_RS03465 PF01022 Bacterial regulatory protein, arsR family JQC88_RS03470 PF13460 NAD(P)H-binding JQC88_RS03475 PF01238 Phosphomannose isomerase type I JQC88_RS03495 PF00210 Ferritin-like domain JQC88_RS03500 PF01048 Phosphorylase superfamily JQC88_RS03505 PF01791 DeoC/LacD family aldolase JQC88_RS03510 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JQC88_RS03510 PF00591 Glycosyl transferase family, a/b domain JQC88_RS03510 PF02885 Glycosyl transferase family, helical bundle domain JQC88_RS03515 PF01676 Metalloenzyme superfamily JQC88_RS03525 PF02664 S-Ribosylhomocysteinase (LuxS) JQC88_RS03545 PF03630 Fumble JQC88_RS03555 PF05066 HB1, ASXL, restriction endonuclease HTH domain JQC88_RS03560 PF00117 Glutamine amidotransferase class-I JQC88_RS03560 PF06418 CTP synthase N-terminus JQC88_RS03570 PF01116 Fructose-bisphosphate aldolase class-II JQC88_RS03575 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JQC88_RS03580 PF00171 Aldehyde dehydrogenase family JQC88_RS03585 PF07497 Rho termination factor, RNA-binding domain JQC88_RS03585 PF07498 Rho termination factor, N-terminal domain JQC88_RS03585 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JQC88_RS03590 PF01197 Ribosomal protein L31 JQC88_RS03595 PF00265 Thymidine kinase JQC88_RS03600 PF03462 PCRF domain JQC88_RS03600 PF00472 RF-1 domain JQC88_RS03605 PF05175 Methyltransferase small domain JQC88_RS03605 PF17827 PrmC N-terminal domain JQC88_RS03610 PF01300 Telomere recombination JQC88_RS03610 PF03481 Putative GTP-binding controlling metal-binding JQC88_RS03615 PF01451 Low molecular weight phosphotyrosine protein phosphatase JQC88_RS03620 PF04260 Protein of unknown function (DUF436) JQC88_RS03625 PF00464 Serine hydroxymethyltransferase JQC88_RS03635 PF02350 UDP-N-acetylglucosamine 2-epimerase JQC88_RS03645 PF00119 ATP synthase A chain JQC88_RS03650 PF00137 ATP synthase subunit C JQC88_RS03655 PF00430 ATP synthase B/B' CF(0) JQC88_RS03660 PF00213 ATP synthase delta (OSCP) subunit JQC88_RS03665 PF02874 ATP synthase alpha/beta family, beta-barrel domain JQC88_RS03665 PF00306 ATP synthase alpha/beta chain, C terminal domain JQC88_RS03665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JQC88_RS03670 PF00231 ATP synthase JQC88_RS03675 PF02874 ATP synthase alpha/beta family, beta-barrel domain JQC88_RS03675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JQC88_RS03680 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JQC88_RS03680 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JQC88_RS03690 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JQC88_RS03695 PF07977 FabA-like domain JQC88_RS03705 PF00436 Single-strand binding protein family JQC88_RS03710 PF06737 Transglycosylase-like domain JQC88_RS03715 PF03070 TENA/THI-4/PQQC family JQC88_RS03720 PF08543 Phosphomethylpyrimidine kinase JQC88_RS03725 PF02110 Hydroxyethylthiazole kinase family JQC88_RS03730 PF02581 Thiamine monophosphate synthase JQC88_RS03735 PF02096 60Kd inner membrane protein JQC88_RS03740 PF01966 HD domain JQC88_RS03745 PF13396 Phospholipase_D-nuclease N-terminal JQC88_RS03745 PF13091 PLD-like domain JQC88_RS03750 PF02583 Metal-sensitive transcriptional repressor JQC88_RS03765 PF01098 Cell cycle protein JQC88_RS03770 PF07478 D-ala D-ala ligase C-terminus JQC88_RS03770 PF01820 D-ala D-ala ligase N-terminus JQC88_RS03775 PF01225 Mur ligase family, catalytic domain JQC88_RS03775 PF02875 Mur ligase family, glutamate ligase domain JQC88_RS03775 PF08245 Mur ligase middle domain JQC88_RS03780 PF00271 Helicase conserved C-terminal domain JQC88_RS03780 PF00270 DEAD/DEAH box helicase JQC88_RS03790 PF03703 Bacterial PH domain JQC88_RS03795 PF03703 Bacterial PH domain JQC88_RS03800 PF01648 4'-phosphopantetheinyl transferase superfamily JQC88_RS03805 PF01168 Alanine racemase, N-terminal domain JQC88_RS03805 PF00842 Alanine racemase, C-terminal domain JQC88_RS03815 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JQC88_RS03820 PF07228 Stage II sporulation protein E (SpoIIE) JQC88_RS03820 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain JQC88_RS03825 PF01740 STAS domain JQC88_RS03830 PF13581 Histidine kinase-like ATPase domain JQC88_RS03835 PF04542 Sigma-70 region 2 JQC88_RS03835 PF04539 Sigma-70 region 3 JQC88_RS03835 PF04545 Sigma-70, region 4 JQC88_RS03840 PF09371 Tex-like protein N-terminal domain JQC88_RS03840 PF00575 S1 RNA binding domain JQC88_RS03840 PF16921 Tex protein YqgF-like domain JQC88_RS03840 PF17674 HHH domain JQC88_RS03845 PF10263 SprT-like family JQC88_RS03875 PF00291 Pyridoxal-phosphate dependent enzyme JQC88_RS03875 PF00585 C-terminal regulatory domain of Threonine dehydratase JQC88_RS03880 PF00694 Aconitase C-terminal domain JQC88_RS03885 PF00330 Aconitase family (aconitate hydratase) JQC88_RS03890 PF00180 Isocitrate/isopropylmalate dehydrogenase JQC88_RS03895 PF00682 HMGL-like JQC88_RS03895 PF08502 LeuA allosteric (dimerisation) domain JQC88_RS03900 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JQC88_RS03900 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JQC88_RS03910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQC88_RS03910 PF00205 Thiamine pyrophosphate enzyme, central domain JQC88_RS03910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQC88_RS03915 PF00920 Dehydratase family JQC88_RS03920 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JQC88_RS03925 PF00814 Glycoprotease family JQC88_RS03930 PF00583 Acetyltransferase (GNAT) family JQC88_RS03935 PF00814 Glycoprotease family JQC88_RS03940 PF00488 MutS domain V JQC88_RS03940 PF01624 MutS domain I JQC88_RS03940 PF05190 MutS family domain IV JQC88_RS03940 PF05188 MutS domain II JQC88_RS03940 PF05192 MutS domain III JQC88_RS03945 PF16326 ABC transporter C-terminal domain JQC88_RS03945 PF00005 ABC transporter JQC88_RS03945 PF12848 ABC transporter JQC88_RS03950 PF02629 CoA binding domain JQC88_RS03950 PF06971 Putative DNA-binding protein N-terminus JQC88_RS03960 PF04143 Sulphur transport JQC88_RS03965 PF01206 Sulfurtransferase TusA JQC88_RS03970 PF00909 Ammonium Transporter Family JQC88_RS03975 PF13407 Periplasmic binding protein domain JQC88_RS03975 PF00356 Bacterial regulatory proteins, lacI family JQC88_RS03980 PF08244 Glycosyl hydrolases family 32 C terminal JQC88_RS03980 PF00251 Glycosyl hydrolases family 32 N-terminal domain JQC88_RS03985 PF00294 pfkB family carbohydrate kinase JQC88_RS03990 PF04397 LytTr DNA-binding domain JQC88_RS03990 PF00072 Response regulator receiver domain JQC88_RS03995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS03995 PF00989 PAS fold JQC88_RS03995 PF17203 Single cache domain 3 JQC88_RS03995 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JQC88_RS04005 PF04647 Accessory gene regulator B JQC88_RS04010 PF05372 Delta lysin family JQC88_RS04015 PF00795 Carbon-nitrogen hydrolase JQC88_RS04025 PF02517 CPBP intramembrane metalloprotease JQC88_RS04030 PF00166 Chaperonin 10 Kd subunit JQC88_RS04035 PF00118 TCP-1/cpn60 chaperonin family JQC88_RS04040 PF00589 Phage integrase family JQC88_RS04040 PF14659 Phage integrase, N-terminal SAM-like domain JQC88_RS04045 PF01381 Helix-turn-helix JQC88_RS04055 PF02498 BRO family, N-terminal domain JQC88_RS04055 PF10548 P22AR C-terminal domain JQC88_RS04170 PF00392 Bacterial regulatory proteins, gntR family JQC88_RS04175 PF00005 ABC transporter JQC88_RS04185 PF00005 ABC transporter JQC88_RS04230 PF02899 Phage integrase, N-terminal SAM-like domain JQC88_RS04230 PF00589 Phage integrase family JQC88_RS04235 PF00589 Phage integrase family JQC88_RS04235 PF02899 Phage integrase, N-terminal SAM-like domain JQC88_RS04250 PF08863 YolD-like protein JQC88_RS04255 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JQC88_RS04260 PF05569 BlaR1 peptidase M56 JQC88_RS04260 PF00905 Penicillin binding protein transpeptidase domain JQC88_RS04265 PF03965 Penicillinase repressor JQC88_RS04270 PF10282 Lactonase, 7-bladed beta-propeller JQC88_RS04275 PF00171 Aldehyde dehydrogenase family JQC88_RS04280 PF01368 DHH family JQC88_RS04280 PF02833 DHHA2 domain JQC88_RS04285 PF00857 Isochorismatase family JQC88_RS04295 PF00800 Prephenate dehydratase JQC88_RS04295 PF01842 ACT domain JQC88_RS04300 PF02898 Nitric oxide synthase, oxygenase domain JQC88_RS04305 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JQC88_RS04305 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JQC88_RS04305 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JQC88_RS04310 PF02540 NAD synthase JQC88_RS04315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JQC88_RS04320 PF14044 NETI protein JQC88_RS04325 PF10397 Adenylosuccinate lyase C-terminus JQC88_RS04325 PF00206 Lyase JQC88_RS04330 PF01371 Trp repressor protein JQC88_RS04335 PF01884 PcrB family JQC88_RS04340 PF13361 UvrD-like helicase C-terminal domain JQC88_RS04340 PF00580 UvrD/REP helicase N-terminal domain JQC88_RS04345 PF03120 NAD-dependent DNA ligase OB-fold domain JQC88_RS04345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JQC88_RS04345 PF00533 BRCA1 C Terminus (BRCT) domain JQC88_RS04345 PF12826 Helix-hairpin-helix motif JQC88_RS04345 PF01653 NAD-dependent DNA ligase adenylation domain JQC88_RS04350 PF07537 CamS sex pheromone cAM373 precursor JQC88_RS04355 PF00474 Sodium:solute symporter family JQC88_RS04360 PF02686 Glu-tRNAGln amidotransferase C subunit JQC88_RS04365 PF01425 Amidase JQC88_RS04370 PF02637 GatB domain JQC88_RS04370 PF02934 GatB/GatE catalytic domain JQC88_RS04375 PF00781 Diacylglycerol kinase catalytic domain JQC88_RS04380 PF05958 tRNA (Uracil-5-)-methyltransferase JQC88_RS04390 PF11799 impB/mucB/samB family C-terminal domain JQC88_RS04390 PF00817 impB/mucB/samB family JQC88_RS04400 PF00210 Ferritin-like domain JQC88_RS04405 PF08353 Domain of unknown function (DUF1727) JQC88_RS04405 PF08245 Mur ligase middle domain JQC88_RS04410 PF07685 CobB/CobQ-like glutamine amidotransferase domain JQC88_RS04420 PF06081 Aromatic acid exporter family member 1 JQC88_RS04425 PF00557 Metallopeptidase family M24 JQC88_RS04440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS04440 PF07730 Histidine kinase JQC88_RS04445 PF00196 Bacterial regulatory proteins, luxR family JQC88_RS04445 PF00072 Response regulator receiver domain JQC88_RS04450 PF03631 Virulence factor BrkB JQC88_RS04460 PF01451 Low molecular weight phosphotyrosine protein phosphatase JQC88_RS04465 PF06569 Protein of unknown function (DUF1128) JQC88_RS04470 PF02073 Thermophilic metalloprotease (M29) JQC88_RS04475 PF03061 Thioesterase superfamily JQC88_RS04480 PF08756 YfkB-like domain JQC88_RS04480 PF04055 Radical SAM superfamily JQC88_RS04490 PF01965 DJ-1/PfpI family JQC88_RS04495 PF00912 Transglycosylase JQC88_RS04500 PF02631 RecX family JQC88_RS04510 PF01476 LysM domain JQC88_RS04510 PF00005 ABC transporter JQC88_RS04520 PF04307 LexA-binding, inner membrane-associated putative hydrolase JQC88_RS04525 PF00730 HhH-GPD superfamily base excision DNA repair protein JQC88_RS04525 PF14815 NUDIX domain JQC88_RS04525 PF00633 Helix-hairpin-helix motif JQC88_RS04530 PF04167 Protein of unknown function (DUF402) JQC88_RS04535 PF00005 ABC transporter JQC88_RS04535 PF00664 ABC transporter transmembrane region JQC88_RS04540 PF06081 Aromatic acid exporter family member 1 JQC88_RS04545 PF00202 Aminotransferase class-III JQC88_RS04550 PF00578 AhpC/TSA family JQC88_RS04555 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JQC88_RS04555 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JQC88_RS04560 PF01475 Ferric uptake regulator family JQC88_RS04730 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS04735 PF00005 ABC transporter JQC88_RS04745 PF08331 Domain of unknown function (DUF1730) JQC88_RS04750 PF00588 SpoU rRNA Methylase family JQC88_RS04770 PF00206 Lyase JQC88_RS04770 PF10415 Fumarase C C-terminus JQC88_RS04775 PF00849 RNA pseudouridylate synthase JQC88_RS04775 PF01479 S4 domain JQC88_RS04780 PF07730 Histidine kinase JQC88_RS04780 PF13185 GAF domain JQC88_RS04785 PF00196 Bacterial regulatory proteins, luxR family JQC88_RS04785 PF00072 Response regulator receiver domain JQC88_RS04795 PF04286 Protein of unknown function (DUF445) JQC88_RS04800 PF06133 Control of competence regulator ComK, YlbF/YmcA JQC88_RS04805 PF00149 Calcineurin-like phosphoesterase JQC88_RS04815 PF01966 HD domain JQC88_RS04825 PF00639 PPIC-type PPIASE domain JQC88_RS04840 PF01230 HIT domain JQC88_RS04845 PF00005 ABC transporter JQC88_RS04850 PF05975 Bacterial ABC transporter protein EcsB JQC88_RS04865 PF01208 Uroporphyrinogen decarboxylase (URO-D) JQC88_RS04870 PF00762 Ferrochelatase JQC88_RS04875 PF01593 Flavin containing amine oxidoreductase JQC88_RS04950 PF00501 AMP-binding enzyme JQC88_RS04950 PF13193 AMP-binding enzyme C-terminal domain JQC88_RS04960 PF01809 Putative membrane protein insertion efficiency factor JQC88_RS04965 PF00293 NUDIX domain JQC88_RS04970 PF00326 Prolyl oligopeptidase family JQC88_RS04975 PF01293 Phosphoenolpyruvate carboxykinase JQC88_RS04980 PF00438 S-adenosylmethionine synthetase, N-terminal domain JQC88_RS04980 PF02772 S-adenosylmethionine synthetase, central domain JQC88_RS04980 PF02773 S-adenosylmethionine synthetase, C-terminal domain JQC88_RS04990 PF00248 Aldo/keto reductase family JQC88_RS05000 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JQC88_RS05005 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JQC88_RS05015 PF00923 Transaldolase/Fructose-6-phosphate aldolase JQC88_RS05030 PF00196 Bacterial regulatory proteins, luxR family JQC88_RS05030 PF04542 Sigma-70 region 2 JQC88_RS05040 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JQC88_RS05040 PF13457 GW (Gly-Tryp) dipeptide domain JQC88_RS05050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JQC88_RS05050 PF01872 RibD C-terminal domain JQC88_RS05055 PF00677 Lumazine binding domain JQC88_RS05060 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JQC88_RS05060 PF00925 GTP cyclohydrolase II JQC88_RS05065 PF00885 6,7-dimethyl-8-ribityllumazine synthase JQC88_RS05070 PF01619 Proline dehydrogenase JQC88_RS05075 PF12146 Serine aminopeptidase, S33 JQC88_RS05080 PF01047 MarR family JQC88_RS05085 PF06962 Putative rRNA methylase JQC88_RS05090 PF16199 Radical_SAM C-terminal domain JQC88_RS05090 PF04055 Radical SAM superfamily JQC88_RS05095 PF07690 Major Facilitator Superfamily JQC88_RS05100 PF13603 Leucyl-tRNA synthetase, Domain 2 JQC88_RS05100 PF08264 Anticodon-binding domain of tRNA JQC88_RS05100 PF00133 tRNA synthetases class I (I, L, M and V) JQC88_RS05100 PF09334 tRNA synthetases class I (M) JQC88_RS05110 PF01468 GA module JQC88_RS05110 PF07564 Domain of Unknown Function (DUF1542) JQC88_RS05110 PF01468 GA module JQC88_RS05110 PF04650 YSIRK type signal peptide JQC88_RS05110 PF07564 Domain of Unknown Function (DUF1542) JQC88_RS05110 PF04650 YSIRK type signal peptide JQC88_RS05120 PF14667 Polysaccharide biosynthesis C-terminal domain JQC88_RS05120 PF01943 Polysaccharide biosynthesis protein JQC88_RS05125 PF00849 RNA pseudouridylate synthase JQC88_RS05125 PF01479 S4 domain JQC88_RS05135 PF01546 Peptidase family M20/M25/M40 JQC88_RS05140 PF01063 Amino-transferase class IV JQC88_RS05145 PF01636 Phosphotransferase enzyme family JQC88_RS05150 PF02390 Putative methyltransferase JQC88_RS05160 PF05343 M42 glutamyl aminopeptidase JQC88_RS05165 PF00085 Thioredoxin JQC88_RS05170 PF07285 Protein of unknown function (DUF1444) JQC88_RS05175 PF14794 Domain of unknown function (DUF4479) JQC88_RS05175 PF01588 Putative tRNA binding domain JQC88_RS05180 PF17854 FtsK alpha domain JQC88_RS05180 PF01580 FtsK/SpoIIIE family JQC88_RS05180 PF09397 Ftsk gamma domain JQC88_RS05185 PF02875 Mur ligase family, glutamate ligase domain JQC88_RS05185 PF08245 Mur ligase middle domain JQC88_RS05185 PF01225 Mur ligase family, catalytic domain JQC88_RS05190 PF06103 Bacterial protein of unknown function (DUF948) JQC88_RS05200 PF01817 Chorismate mutase type II JQC88_RS05200 PF00793 DAHP synthetase I family JQC88_RS05205 PF00356 Bacterial regulatory proteins, lacI family JQC88_RS05210 PF01268 Formate--tetrahydrofolate ligase JQC88_RS05215 PF00905 Penicillin binding protein transpeptidase domain JQC88_RS05215 PF00912 Transglycosylase JQC88_RS05220 PF00579 tRNA synthetases class I (W and Y) JQC88_RS05220 PF01479 S4 domain JQC88_RS05225 PF13180 PDZ domain JQC88_RS05230 PF01553 Acyltransferase JQC88_RS05235 PF02378 Phosphotransferase system, EIIC JQC88_RS05235 PF00367 phosphotransferase system, EIIB JQC88_RS05245 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JQC88_RS05245 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JQC88_RS05245 PF01842 ACT domain JQC88_RS05250 PF00266 Aminotransferase class-V JQC88_RS05255 PF02566 OsmC-like protein JQC88_RS05260 PF03009 Glycerophosphoryl diester phosphodiesterase family JQC88_RS05265 PF01479 S4 domain JQC88_RS05265 PF00163 Ribosomal protein S4/S9 N-terminal domain JQC88_RS05270 PF13185 GAF domain JQC88_RS05275 PF06160 Septation ring formation regulator, EzrA JQC88_RS05280 PF00266 Aminotransferase class-V JQC88_RS05285 PF02568 Thiamine biosynthesis protein (ThiI) JQC88_RS05285 PF02926 THUMP domain JQC88_RS05290 PF01925 Sulfite exporter TauE/SafE JQC88_RS05295 PF08534 Redoxin JQC88_RS05300 PF02384 N-6 DNA Methylase JQC88_RS05305 PF00871 Acetokinase family JQC88_RS05315 PF00582 Universal stress protein family JQC88_RS05320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JQC88_RS05320 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JQC88_RS05325 PF00557 Metallopeptidase family M24 JQC88_RS05325 PF01321 Creatinase/Prolidase N-terminal domain JQC88_RS05340 PF00571 CBS domain JQC88_RS05340 PF07085 DRTGG domain JQC88_RS05340 PF00392 Bacterial regulatory proteins, gntR family JQC88_RS05340 PF03061 Thioesterase superfamily JQC88_RS05345 PF01368 DHH family JQC88_RS05345 PF02272 DHHA1 domain JQC88_RS05350 PF07733 Bacterial DNA polymerase III alpha NTPase domain JQC88_RS05350 PF02811 PHP domain JQC88_RS05350 PF14579 Helix-hairpin-helix motif JQC88_RS05350 PF01336 OB-fold nucleic acid binding domain JQC88_RS05350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JQC88_RS05355 PF00390 Malic enzyme, N-terminal domain JQC88_RS05355 PF03949 Malic enzyme, NAD binding domain JQC88_RS05360 PF17848 Acetyl-coA carboxylase zinc finger domain JQC88_RS05360 PF01039 Carboxyl transferase domain JQC88_RS05365 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JQC88_RS05370 PF00365 Phosphofructokinase JQC88_RS05375 PF00391 PEP-utilising enzyme, mobile domain JQC88_RS05375 PF00224 Pyruvate kinase, barrel domain JQC88_RS05375 PF02887 Pyruvate kinase, alpha/beta domain JQC88_RS05380 PF00324 Amino acid permease JQC88_RS05385 PF00285 Citrate synthase, C-terminal domain JQC88_RS05390 PF00180 Isocitrate/isopropylmalate dehydrogenase JQC88_RS05395 PF00072 Response regulator receiver domain JQC88_RS05395 PF00486 Transcriptional regulatory protein, C terminal JQC88_RS05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS05400 PF00989 PAS fold JQC88_RS05400 PF00512 His Kinase A (phospho-acceptor) domain JQC88_RS05400 PF16736 Single Cache-like JQC88_RS05405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JQC88_RS05405 PF00476 DNA polymerase family A JQC88_RS05405 PF01367 5'-3' exonuclease, C-terminal SAM fold JQC88_RS05410 PF06827 Zinc finger found in FPG and IleRS JQC88_RS05410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JQC88_RS05410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JQC88_RS05415 PF01121 Dephospho-CoA kinase JQC88_RS05425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JQC88_RS05425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JQC88_RS05435 PF03477 ATP cone domain JQC88_RS05440 PF07261 Replication initiation and membrane attachment JQC88_RS05445 PF01695 IstB-like ATP binding protein JQC88_RS05445 PF07319 Primosomal protein DnaI N-terminus JQC88_RS05450 PF03129 Anticodon binding domain JQC88_RS05450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JQC88_RS05450 PF02824 TGS domain JQC88_RS05450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JQC88_RS05455 PF00324 Amino acid permease JQC88_RS05460 PF05198 Translation initiation factor IF-3, N-terminal domain JQC88_RS05460 PF00707 Translation initiation factor IF-3, C-terminal domain JQC88_RS05465 PF01632 Ribosomal protein L35 JQC88_RS05470 PF00453 Ribosomal protein L20 JQC88_RS05485 PF05697 Bacterial trigger factor protein (TF) JQC88_RS05485 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JQC88_RS05485 PF05698 Bacterial trigger factor protein (TF) C-terminus JQC88_RS05490 PF06689 ClpX C4-type zinc finger JQC88_RS05490 PF10431 C-terminal, D2-small domain, of ClpB protein JQC88_RS05490 PF07724 AAA domain (Cdc48 subfamily) JQC88_RS05495 PF01926 50S ribosome-binding GTPase JQC88_RS05500 PF01488 Shikimate / quinate 5-dehydrogenase JQC88_RS05500 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JQC88_RS05500 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JQC88_RS05510 PF03900 Porphobilinogen deaminase, C-terminal domain JQC88_RS05510 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JQC88_RS05515 PF02602 Uroporphyrinogen-III synthase HemD JQC88_RS05515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQC88_RS05520 PF00490 Delta-aminolevulinic acid dehydratase JQC88_RS05525 PF00202 Aminotransferase class-III JQC88_RS05535 PF03352 Methyladenine glycosylase JQC88_RS05540 PF10458 Valyl tRNA synthetase tRNA binding arm JQC88_RS05540 PF00133 tRNA synthetases class I (I, L, M and V) JQC88_RS05540 PF08264 Anticodon-binding domain of tRNA JQC88_RS05545 PF08245 Mur ligase middle domain JQC88_RS05545 PF02875 Mur ligase family, glutamate ligase domain JQC88_RS05555 PF04002 RadC-like JAB domain JQC88_RS05575 PF04085 rod shape-determining protein MreC JQC88_RS05585 PF00829 Ribosomal prokaryotic L21 protein JQC88_RS05590 PF04327 Cysteine protease Prp JQC88_RS05595 PF01016 Ribosomal L27 protein JQC88_RS05600 PF09269 Domain of unknown function (DUF1967) JQC88_RS05600 PF01926 50S ribosome-binding GTPase JQC88_RS05600 PF01018 GTP1/OBG JQC88_RS05610 PF07499 RuvA, C-terminal domain JQC88_RS05610 PF01330 RuvA N terminal domain JQC88_RS05615 PF05496 Holliday junction DNA helicase RuvB P-loop domain JQC88_RS05615 PF05491 RuvB C-terminal winged helix domain JQC88_RS05615 PF17864 RuvB AAA lid domain JQC88_RS05620 PF02547 Queuosine biosynthesis protein JQC88_RS05625 PF01702 Queuine tRNA-ribosyltransferase JQC88_RS05630 PF02699 Preprotein translocase subunit JQC88_RS05635 PF02355 Protein export membrane protein JQC88_RS05635 PF07549 SecD/SecF GG Motif JQC88_RS05640 PF01368 DHH family JQC88_RS05640 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JQC88_RS05640 PF17768 RecJ OB domain JQC88_RS05640 PF02272 DHHA1 domain JQC88_RS05645 PF00156 Phosphoribosyl transferase domain JQC88_RS05650 PF13291 ACT domain JQC88_RS05650 PF04607 Region found in RelA / SpoT proteins JQC88_RS05650 PF02824 TGS domain JQC88_RS05655 PF02580 D-Tyr-tRNA(Tyr) deacylase JQC88_RS05660 PF08239 Bacterial SH3 domain JQC88_RS05660 PF01520 N-acetylmuramoyl-L-alanine amidase JQC88_RS05665 PF03129 Anticodon binding domain JQC88_RS05665 PF13393 Histidyl-tRNA synthetase JQC88_RS05670 PF02938 GAD domain JQC88_RS05670 PF00152 tRNA synthetases class II (D, K and N) JQC88_RS05670 PF01336 OB-fold nucleic acid binding domain JQC88_RS05680 PF00899 ThiF family JQC88_RS05685 PF16193 AAA C-terminal domain JQC88_RS05685 PF12002 MgsA AAA+ ATPase C terminal JQC88_RS05685 PF05496 Holliday junction DNA helicase RuvB P-loop domain JQC88_RS05690 PF02082 Transcriptional regulator JQC88_RS05700 PF00296 Luciferase-like monooxygenase JQC88_RS05705 PF00266 Aminotransferase class-V JQC88_RS05720 PF14490 Helix-hairpin-helix containing domain JQC88_RS05720 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JQC88_RS05720 PF13538 UvrD-like helicase C-terminal domain JQC88_RS05725 PF02272 DHHA1 domain JQC88_RS05725 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JQC88_RS05725 PF01411 tRNA synthetases class II (A) JQC88_RS05730 PF06135 IreB regulatory phosphoprotein JQC88_RS05735 PF03652 Holliday junction resolvase JQC88_RS05740 PF06949 Protein of unknown function (DUF1292) JQC88_RS05750 PF01136 Peptidase family U32 JQC88_RS05755 PF16325 Peptidase family U32 C-terminal domain JQC88_RS05755 PF01136 Peptidase family U32 JQC88_RS05760 PF00485 Phosphoribulokinase / Uridine kinase family JQC88_RS05765 PF03449 Transcription elongation factor, N-terminal JQC88_RS05765 PF01272 Transcription elongation factor, GreA/GreB, C-term JQC88_RS05770 PF01797 Transposase IS200 like JQC88_RS05775 PF02682 Carboxyltransferase domain, subdomain C and D JQC88_RS05780 PF02626 Carboxyltransferase domain, subdomain A and B JQC88_RS05785 PF00364 Biotin-requiring enzyme JQC88_RS05790 PF02785 Biotin carboxylase C-terminal domain JQC88_RS05790 PF00289 Biotin carboxylase, N-terminal domain JQC88_RS05790 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQC88_RS05795 PF03746 LamB/YcsF family JQC88_RS05800 PF01566 Natural resistance-associated macrophage protein JQC88_RS05805 PF01048 Phosphorylase superfamily JQC88_RS05815 PF01926 50S ribosome-binding GTPase JQC88_RS05820 PF01488 Shikimate / quinate 5-dehydrogenase JQC88_RS05820 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JQC88_RS05820 PF08501 Shikimate dehydrogenase substrate binding domain JQC88_RS05825 PF01985 CRS1 / YhbY (CRM) domain JQC88_RS05830 PF01467 Cytidylyltransferase-like JQC88_RS05835 PF01966 HD domain JQC88_RS05845 PF13649 Methyltransferase domain JQC88_RS05855 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JQC88_RS05860 PF03772 Competence protein JQC88_RS05860 PF13567 Domain of unknown function (DUF4131) JQC88_RS05860 PF00753 Metallo-beta-lactamase superfamily JQC88_RS05865 PF06144 DNA polymerase III, delta subunit JQC88_RS05870 PF01649 Ribosomal protein S20 JQC88_RS05875 PF00679 Elongation factor G C-terminus JQC88_RS05875 PF14492 Elongation Factor G, domain II JQC88_RS05875 PF03144 Elongation factor Tu domain 2 JQC88_RS05875 PF06421 GTP-binding protein LepA C-terminus JQC88_RS05875 PF00009 Elongation factor Tu GTP binding domain JQC88_RS05880 PF06969 HemN C-terminal domain JQC88_RS05880 PF04055 Radical SAM superfamily JQC88_RS05885 PF01628 HrcA protein C terminal domain JQC88_RS05890 PF01025 GrpE JQC88_RS05895 PF00012 Hsp70 protein JQC88_RS05900 PF01556 DnaJ C terminal domain JQC88_RS05900 PF00226 DnaJ domain JQC88_RS05900 PF00684 DnaJ central domain JQC88_RS05910 PF04452 RNA methyltransferase JQC88_RS05915 PF04055 Radical SAM superfamily JQC88_RS05915 PF01938 TRAM domain JQC88_RS05915 PF00919 Uncharacterized protein family UPF0004 JQC88_RS05920 PF01165 Ribosomal protein S21 JQC88_RS05925 PF01957 NfeD-like C-terminal, partner-binding JQC88_RS05925 PF01972 Serine dehydrogenase proteinase JQC88_RS05930 PF12127 SigmaW regulon antibacterial JQC88_RS05940 PF02562 PhoH-like protein JQC88_RS05945 PF02130 Uncharacterized protein family UPF0054 JQC88_RS05950 PF01219 Prokaryotic diacylglycerol kinase JQC88_RS05955 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JQC88_RS05960 PF07650 KH domain JQC88_RS05960 PF01926 50S ribosome-binding GTPase JQC88_RS05965 PF11967 Recombination protein O N terminal JQC88_RS05965 PF02565 Recombination protein O C terminal JQC88_RS05970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JQC88_RS05970 PF03129 Anticodon binding domain JQC88_RS05975 PF08279 HTH domain JQC88_RS05975 PF00571 CBS domain JQC88_RS05980 PF03618 Kinase/pyrophosphorylase JQC88_RS05985 PF01807 CHC2 zinc finger JQC88_RS05985 PF08275 DNA primase catalytic core, N-terminal domain JQC88_RS05985 PF00772 DnaB-like helicase N terminal domain JQC88_RS05985 PF13662 Toprim domain JQC88_RS05990 PF03979 Sigma-70 factor, region 1.1 JQC88_RS05990 PF00140 Sigma-70 factor, region 1.2 JQC88_RS05990 PF04542 Sigma-70 region 2 JQC88_RS05990 PF04539 Sigma-70 region 3 JQC88_RS05990 PF04545 Sigma-70, region 4 JQC88_RS05995 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JQC88_RS06000 PF01784 NIF3 (NGG1p interacting factor 3) JQC88_RS06005 PF00271 Helicase conserved C-terminal domain JQC88_RS06005 PF00270 DEAD/DEAH box helicase JQC88_RS06010 PF01261 Xylose isomerase-like TIM barrel JQC88_RS06015 PF00005 ABC transporter JQC88_RS06020 PF00950 ABC 3 transport family JQC88_RS06025 PF01475 Ferric uptake regulator family JQC88_RS06030 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JQC88_RS06030 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JQC88_RS06035 PF03717 Penicillin-binding Protein dimerisation domain JQC88_RS06035 PF00905 Penicillin binding protein transpeptidase domain JQC88_RS06040 PF00471 Ribosomal protein L33 JQC88_RS06045 PF01812 5-formyltetrahydrofolate cyclo-ligase family JQC88_RS06050 PF01694 Rhomboid family JQC88_RS06055 PF06014 Bacterial protein of unknown function (DUF910) JQC88_RS06060 PF00480 ROK family JQC88_RS06065 PF01910 Thiamine-binding protein JQC88_RS06070 PF00753 Metallo-beta-lactamase superfamily JQC88_RS06075 PF00437 Type II/IV secretion system protein JQC88_RS06080 PF00482 Type II secretion system (T2SS), protein F JQC88_RS06085 PF07963 Prokaryotic N-terminal methylation motif JQC88_RS06105 PF01202 Shikimate kinase JQC88_RS06110 PF01571 Aminomethyltransferase folate-binding domain JQC88_RS06110 PF08669 Glycine cleavage T-protein C-terminal barrel domain JQC88_RS06115 PF02347 Glycine cleavage system P-protein JQC88_RS06120 PF02347 Glycine cleavage system P-protein JQC88_RS06130 PF00581 Rhodanese-like domain JQC88_RS06135 PF03099 Biotin/lipoate A/B protein ligase family JQC88_RS06150 PF00557 Metallopeptidase family M24 JQC88_RS06150 PF01321 Creatinase/Prolidase N-terminal domain JQC88_RS06155 PF08207 Elongation factor P (EF-P) KOW-like domain JQC88_RS06155 PF01132 Elongation factor P (EF-P) OB domain JQC88_RS06155 PF09285 Elongation factor P, C-terminal JQC88_RS06160 PF02774 Semialdehyde dehydrogenase, dimerisation domain JQC88_RS06160 PF01118 Semialdehyde dehydrogenase, NAD binding domain JQC88_RS06165 PF01960 ArgJ family JQC88_RS06170 PF00696 Amino acid kinase family JQC88_RS06175 PF00202 Aminotransferase class-III JQC88_RS06180 PF00364 Biotin-requiring enzyme JQC88_RS06185 PF02785 Biotin carboxylase C-terminal domain JQC88_RS06185 PF00289 Biotin carboxylase, N-terminal domain JQC88_RS06185 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQC88_RS06190 PF03780 Asp23 family, cell envelope-related function JQC88_RS06195 PF01029 NusB family JQC88_RS06200 PF13742 OB-fold nucleic acid binding domain JQC88_RS06200 PF02601 Exonuclease VII, large subunit JQC88_RS06205 PF02609 Exonuclease VII small subunit JQC88_RS06210 PF00348 Polyprenyl synthetase JQC88_RS06215 PF02863 Arginine repressor, C-terminal domain JQC88_RS06215 PF01316 Arginine repressor, DNA binding domain JQC88_RS06220 PF13476 AAA domain JQC88_RS06225 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS06225 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQC88_RS06230 PF00676 Dehydrogenase E1 component JQC88_RS06235 PF02780 Transketolase, C-terminal domain JQC88_RS06235 PF02779 Transketolase, pyrimidine binding domain JQC88_RS06240 PF02817 e3 binding domain JQC88_RS06240 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JQC88_RS06240 PF00364 Biotin-requiring enzyme JQC88_RS06245 PF06491 Disulphide isomerase JQC88_RS06250 PF06081 Aromatic acid exporter family member 1 JQC88_RS06250 PF11728 Putative aromatic acid exporter C-terminal domain JQC88_RS06260 PF01546 Peptidase family M20/M25/M40 JQC88_RS06260 PF07687 Peptidase dimerisation domain JQC88_RS06265 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JQC88_RS06265 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JQC88_RS06270 PF16657 Maltogenic Amylase, C-terminal domain JQC88_RS06270 PF00128 Alpha amylase, catalytic domain JQC88_RS06280 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JQC88_RS06280 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JQC88_RS06285 PF12706 Beta-lactamase superfamily domain JQC88_RS06290 PF14748 Pyrroline-5-carboxylate reductase dimerisation JQC88_RS06290 PF03807 NADP oxidoreductase coenzyme F420-dependent JQC88_RS06295 PF00106 short chain dehydrogenase JQC88_RS06300 PF00248 Aldo/keto reductase family JQC88_RS06305 PF00293 NUDIX domain JQC88_RS06310 PF01475 Ferric uptake regulator family JQC88_RS06315 PF02899 Phage integrase, N-terminal SAM-like domain JQC88_RS06315 PF00589 Phage integrase family JQC88_RS06320 PF03745 Domain of unknown function (DUF309) JQC88_RS06325 PF02616 Segregation and condensation protein ScpA JQC88_RS06330 PF04079 Segregation and condensation complex subunit ScpB JQC88_RS06335 PF01479 S4 domain JQC88_RS06335 PF00849 RNA pseudouridylate synthase JQC88_RS06340 PF00486 Transcriptional regulatory protein, C terminal JQC88_RS06340 PF00072 Response regulator receiver domain JQC88_RS06345 PF18698 Histidine kinase sensor domain JQC88_RS06345 PF00512 His Kinase A (phospho-acceptor) domain JQC88_RS06345 PF00672 HAMP domain JQC88_RS06345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS06350 PF12822 ECF transporter, substrate-specific component JQC88_RS06365 PF00271 Helicase conserved C-terminal domain JQC88_RS06365 PF00270 DEAD/DEAH box helicase JQC88_RS06370 PF01476 LysM domain JQC88_RS06380 PF00710 Asparaginase, N-terminal JQC88_RS06380 PF17763 Glutaminase/Asparaginase C-terminal domain JQC88_RS06385 PF02224 Cytidylate kinase JQC88_RS06390 PF00575 S1 RNA binding domain JQC88_RS06395 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JQC88_RS06395 PF01926 50S ribosome-binding GTPase JQC88_RS06400 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JQC88_RS06400 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JQC88_RS06405 PF00216 Bacterial DNA-binding protein JQC88_RS06415 PF01209 ubiE/COQ5 methyltransferase family JQC88_RS06420 PF00348 Polyprenyl synthetase JQC88_RS06425 PF00334 Nucleoside diphosphate kinase JQC88_RS06430 PF01264 Chorismate synthase JQC88_RS06435 PF01761 3-dehydroquinate synthase JQC88_RS06440 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JQC88_RS06450 PF08858 IDEAL domain JQC88_RS06450 PF08864 UPF0302 domain JQC88_RS06455 PF07187 Protein of unknown function (DUF1405) JQC88_RS06460 PF04298 Putative neutral zinc metallopeptidase JQC88_RS06465 PF03819 MazG nucleotide pyrophosphohydrolase domain JQC88_RS06470 PF00534 Glycosyl transferases group 1 JQC88_RS06470 PF13439 Glycosyltransferase Family 4 JQC88_RS06475 PF13735 tRNA nucleotidyltransferase domain 2 putative JQC88_RS06475 PF12627 Probable RNA and SrmB- binding site of polymerase A JQC88_RS06475 PF01743 Poly A polymerase head domain JQC88_RS06480 PF03099 Biotin/lipoate A/B protein ligase family JQC88_RS06480 PF08279 HTH domain JQC88_RS06480 PF02237 Biotin protein ligase C terminal domain JQC88_RS06485 PF00929 Exonuclease JQC88_RS06485 PF04851 Type III restriction enzyme, res subunit JQC88_RS06485 PF13307 Helicase C-terminal domain JQC88_RS06490 PF00152 tRNA synthetases class II (D, K and N) JQC88_RS06490 PF01336 OB-fold nucleic acid binding domain JQC88_RS06495 PF07261 Replication initiation and membrane attachment JQC88_RS06500 PF00730 HhH-GPD superfamily base excision DNA repair protein JQC88_RS06500 PF10576 Iron-sulfur binding domain of endonuclease III JQC88_RS06500 PF00633 Helix-hairpin-helix motif JQC88_RS06510 PF00912 Transglycosylase JQC88_RS06510 PF00905 Penicillin binding protein transpeptidase domain JQC88_RS06515 PF03838 Recombination protein U JQC88_RS06525 PF06908 YspA SLOG family JQC88_RS06530 PF05103 DivIVA protein JQC88_RS06540 PF02926 THUMP domain JQC88_RS06540 PF01170 Putative RNA methylase family UPF0020 JQC88_RS06550 PF00350 Dynamin family JQC88_RS06555 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JQC88_RS06555 PF01367 5'-3' exonuclease, C-terminal SAM fold JQC88_RS06560 PF07564 Domain of Unknown Function (DUF1542) JQC88_RS06560 PF01468 GA module JQC88_RS06570 PF02592 Putative vitamin uptake transporter JQC88_RS06575 PF10782 Zinc-finger JQC88_RS06580 PF13769 Virulence factor JQC88_RS06580 PF08712 Scaffold protein Nfu/NifU N terminal JQC88_RS06585 PF06491 Disulphide isomerase JQC88_RS06595 PF00005 ABC transporter JQC88_RS06600 PF00303 Thymidylate synthase JQC88_RS06605 PF00186 Dihydrofolate reductase JQC88_RS06610 PF02645 Uncharacterised protein, DegV family COG1307 JQC88_RS06615 PF01625 Peptide methionine sulfoxide reductase JQC88_RS06620 PF01641 SelR domain JQC88_RS06625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JQC88_RS06630 PF06855 YozE SAM-like fold JQC88_RS06635 PF01471 Putative peptidoglycan binding domain JQC88_RS06635 PF03572 Peptidase family S41 JQC88_RS06635 PF17820 PDZ domain JQC88_RS06645 PF04101 Glycosyltransferase family 28 C-terminal domain JQC88_RS06645 PF03033 Glycosyltransferase family 28 N-terminal domain JQC88_RS06650 PF01569 PAP2 superfamily JQC88_RS06655 PF03459 TOBE domain JQC88_RS06655 PF17912 MalK OB fold domain JQC88_RS06655 PF00005 ABC transporter JQC88_RS06660 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS06670 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS06680 PF01554 MatE JQC88_RS06685 PF08220 DeoR-like helix-turn-helix domain JQC88_RS06685 PF00455 DeoR C terminal sensor domain JQC88_RS06690 PF00486 Transcriptional regulatory protein, C terminal JQC88_RS06690 PF00072 Response regulator receiver domain JQC88_RS06695 PF18719 ArlS sensor domain JQC88_RS06695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS06695 PF00512 His Kinase A (phospho-acceptor) domain JQC88_RS06700 PF00676 Dehydrogenase E1 component JQC88_RS06700 PF16870 2-oxoglutarate dehydrogenase C-terminal JQC88_RS06700 PF02779 Transketolase, pyrimidine binding domain JQC88_RS06705 PF02817 e3 binding domain JQC88_RS06705 PF00364 Biotin-requiring enzyme JQC88_RS06705 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JQC88_RS06725 PF08406 CbbQ/NirQ/NorQ C-terminal JQC88_RS06725 PF07728 AAA domain (dynein-related subfamily) JQC88_RS06730 PF00092 von Willebrand factor type A domain JQC88_RS06735 PF05525 Branched-chain amino acid transport protein JQC88_RS06740 PF05816 Toxic anion resistance protein (TelA) JQC88_RS06750 PF00708 Acylphosphatase JQC88_RS06760 PF00313 'Cold-shock' DNA-binding domain JQC88_RS06775 PF00005 ABC transporter JQC88_RS06785 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JQC88_RS06785 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JQC88_RS06790 PF00842 Alanine racemase, C-terminal domain JQC88_RS06790 PF01168 Alanine racemase, N-terminal domain JQC88_RS06795 PF01546 Peptidase family M20/M25/M40 JQC88_RS06795 PF07687 Peptidase dimerisation domain JQC88_RS06800 PF00132 Bacterial transferase hexapeptide (six repeats) JQC88_RS06800 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JQC88_RS06800 PF14602 Hexapeptide repeat of succinyl-transferase JQC88_RS06805 PF01113 Dihydrodipicolinate reductase, N-terminus JQC88_RS06805 PF05173 Dihydrodipicolinate reductase, C-terminus JQC88_RS06810 PF00701 Dihydrodipicolinate synthetase family JQC88_RS06815 PF02774 Semialdehyde dehydrogenase, dimerisation domain JQC88_RS06815 PF01118 Semialdehyde dehydrogenase, NAD binding domain JQC88_RS06820 PF01842 ACT domain JQC88_RS06820 PF13840 ACT domain JQC88_RS06820 PF00696 Amino acid kinase family JQC88_RS06830 PF12848 ABC transporter JQC88_RS06830 PF00005 ABC transporter JQC88_RS06835 PF17783 CvfB-like winged helix domain JQC88_RS06835 PF13509 S1 domain JQC88_RS06840 PF12849 PBP superfamily domain JQC88_RS06845 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS06850 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS06855 PF00005 ABC transporter JQC88_RS06860 PF01895 PhoU domain JQC88_RS06875 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS06880 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS06885 PF00005 ABC transporter JQC88_RS06890 PF00005 ABC transporter JQC88_RS06895 PF01497 Periplasmic binding protein JQC88_RS06905 PF02388 FemAB family JQC88_RS06910 PF02388 FemAB family JQC88_RS06920 PF00290 Tryptophan synthase alpha chain JQC88_RS06925 PF00291 Pyridoxal-phosphate dependent enzyme JQC88_RS06930 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JQC88_RS06935 PF00218 Indole-3-glycerol phosphate synthase JQC88_RS06940 PF00591 Glycosyl transferase family, a/b domain JQC88_RS06945 PF02885 Glycosyl transferase family, helical bundle domain JQC88_RS06945 PF00591 Glycosyl transferase family, a/b domain JQC88_RS06945 PF00117 Glutamine amidotransferase class-I JQC88_RS06950 PF04715 Anthranilate synthase component I, N terminal region JQC88_RS06950 PF00425 chorismate binding enzyme JQC88_RS06955 PF02153 Prephenate dehydrogenase JQC88_RS06955 PF01842 ACT domain JQC88_RS06960 PF11798 IMS family HHH motif JQC88_RS06960 PF11799 impB/mucB/samB family C-terminal domain JQC88_RS06960 PF00817 impB/mucB/samB family JQC88_RS06965 PF01361 Tautomerase enzyme JQC88_RS06970 PF03816 Cell envelope-related transcriptional attenuator domain JQC88_RS06975 PF01625 Peptide methionine sulfoxide reductase JQC88_RS06980 PF09924 Uncharacterised conserved protein (DUF2156) JQC88_RS06980 PF03706 Lysylphosphatidylglycerol synthase TM region JQC88_RS06985 PF01594 AI-2E family transporter JQC88_RS06990 PF03123 CAT RNA binding domain JQC88_RS06990 PF00874 PRD domain JQC88_RS06995 PF01235 Sodium:alanine symporter family JQC88_RS07000 PF00521 DNA gyrase/topoisomerase IV, subunit A JQC88_RS07000 PF03989 DNA gyrase C-terminal domain, beta-propeller JQC88_RS07005 PF00986 DNA gyrase B subunit, carboxyl terminus JQC88_RS07005 PF01751 Toprim domain JQC88_RS07005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS07005 PF00204 DNA gyrase B JQC88_RS07010 PF02660 Glycerol-3-phosphate acyltransferase JQC88_RS07020 PF03061 Thioesterase superfamily JQC88_RS07025 PF00330 Aconitase family (aconitate hydratase) JQC88_RS07025 PF00694 Aconitase C-terminal domain JQC88_RS07030 PF02028 BCCT, betaine/carnitine/choline family transporter JQC88_RS07035 PF01741 Large-conductance mechanosensitive channel, MscL JQC88_RS07040 PF13476 AAA domain JQC88_RS07045 PF00149 Calcineurin-like phosphoesterase JQC88_RS07045 PF12320 Type 5 capsule protein repressor C-terminal domain JQC88_RS07050 PF07301 Protein of unknown function (DUF1453) JQC88_RS07060 PF02779 Transketolase, pyrimidine binding domain JQC88_RS07060 PF02780 Transketolase, C-terminal domain JQC88_RS07060 PF00456 Transketolase, thiamine diphosphate binding domain JQC88_RS07065 PF05979 Bacterial protein of unknown function (DUF896) JQC88_RS07075 PF01726 LexA DNA binding domain JQC88_RS07075 PF00717 Peptidase S24-like JQC88_RS07085 PF00478 IMP dehydrogenase / GMP reductase domain JQC88_RS07090 PF00253 Ribosomal protein S14p/S29e JQC88_RS07095 PF00471 Ribosomal protein L33 JQC88_RS07100 PF06628 Catalase-related immune-responsive JQC88_RS07100 PF00199 Catalase JQC88_RS07105 PF00324 Amino acid permease JQC88_RS07120 PF00288 GHMP kinases N terminal domain JQC88_RS07120 PF08544 GHMP kinases C terminal JQC88_RS07125 PF00291 Pyridoxal-phosphate dependent enzyme JQC88_RS07130 PF01842 ACT domain JQC88_RS07130 PF00742 Homoserine dehydrogenase JQC88_RS07130 PF03447 Homoserine dehydrogenase, NAD binding domain JQC88_RS07135 PF13840 ACT domain JQC88_RS07135 PF00696 Amino acid kinase family JQC88_RS07150 PF00565 Staphylococcal nuclease homologue JQC88_RS07160 PF00196 Bacterial regulatory proteins, luxR family JQC88_RS07160 PF00072 Response regulator receiver domain JQC88_RS07165 PF07730 Histidine kinase JQC88_RS07175 PF00005 ABC transporter JQC88_RS07180 PF13396 Phospholipase_D-nuclease N-terminal JQC88_RS07180 PF13091 PLD-like domain JQC88_RS07235 PF05105 Bacteriophage holin family JQC88_RS07330 PF17288 Terminase RNAseH like domain JQC88_RS07330 PF04466 Phage terminase large subunit JQC88_RS07355 PF00692 dUTPase JQC88_RS07435 PF00120 Glutamine synthetase, catalytic domain JQC88_RS07435 PF03951 Glutamine synthetase, beta-Grasp domain JQC88_RS07440 PF13411 MerR HTH family regulatory protein JQC88_RS07445 PF06838 Methionine gamma-lyase JQC88_RS07450 PF16360 GTP-binding GTPase Middle Region JQC88_RS07450 PF01926 50S ribosome-binding GTPase JQC88_RS07450 PF13167 GTP-binding GTPase N-terminal JQC88_RS07455 PF00255 Glutathione peroxidase JQC88_RS07460 PF17209 Hfq protein JQC88_RS07470 PF00561 alpha/beta hydrolase fold JQC88_RS07475 PF01266 FAD dependent oxidoreductase JQC88_RS07475 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JQC88_RS07480 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JQC88_RS07480 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JQC88_RS07485 PF00230 Major intrinsic protein JQC88_RS07490 PF04309 Glycerol-3-phosphate responsive antiterminator JQC88_RS07495 PF08676 MutL C terminal dimerisation domain JQC88_RS07495 PF01119 DNA mismatch repair protein, C-terminal domain JQC88_RS07500 PF05192 MutS domain III JQC88_RS07500 PF05188 MutS domain II JQC88_RS07500 PF05190 MutS family domain IV JQC88_RS07500 PF01624 MutS domain I JQC88_RS07500 PF00488 MutS domain V JQC88_RS07510 PF06133 Control of competence regulator ComK, YlbF/YmcA JQC88_RS07515 PF04055 Radical SAM superfamily JQC88_RS07515 PF01938 TRAM domain JQC88_RS07515 PF00919 Uncharacterized protein family UPF0004 JQC88_RS07525 PF05908 Poly-gamma-glutamate hydrolase JQC88_RS07530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQC88_RS07535 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JQC88_RS07535 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JQC88_RS07535 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JQC88_RS07540 PF13277 YmdB-like protein JQC88_RS07550 PF01966 HD domain JQC88_RS07550 PF00013 KH domain JQC88_RS07550 PF12072 Domain of unknown function (DUF3552) JQC88_RS07555 PF00154 recA bacterial DNA recombination protein JQC88_RS07560 PF00994 Probable molybdopterin binding domain JQC88_RS07560 PF02464 Competence-damaged protein JQC88_RS07560 PF18146 Damage-inducible protein CinA KH domain JQC88_RS07565 PF01066 CDP-alcohol phosphatidyltransferase JQC88_RS07575 PF11868 Protein of unknown function (DUF3388) JQC88_RS07585 PF00675 Insulinase (Peptidase family M16) JQC88_RS07585 PF05193 Peptidase M16 inactive domain JQC88_RS07590 PF05193 Peptidase M16 inactive domain JQC88_RS07595 PF07702 UTRA domain JQC88_RS07595 PF00392 Bacterial regulatory proteins, gntR family JQC88_RS07600 PF09397 Ftsk gamma domain JQC88_RS07600 PF17854 FtsK alpha domain JQC88_RS07600 PF01580 FtsK/SpoIIIE family JQC88_RS07605 PF17770 Ribonuclease J C-terminal domain JQC88_RS07605 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JQC88_RS07605 PF00753 Metallo-beta-lactamase superfamily JQC88_RS07610 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JQC88_RS07610 PF01138 3' exoribonuclease family, domain 1 JQC88_RS07610 PF03725 3' exoribonuclease family, domain 2 JQC88_RS07610 PF00575 S1 RNA binding domain JQC88_RS07610 PF00013 KH domain JQC88_RS07615 PF00312 Ribosomal protein S15 JQC88_RS07620 PF06574 FAD synthetase JQC88_RS07620 PF01687 Riboflavin kinase JQC88_RS07625 PF01509 TruB family pseudouridylate synthase (N terminal domain) JQC88_RS07625 PF16198 tRNA pseudouridylate synthase B C-terminal domain JQC88_RS07630 PF02033 Ribosome-binding factor A JQC88_RS07635 PF04760 Translation initiation factor IF-2, N-terminal region JQC88_RS07635 PF11987 Translation-initiation factor 2 JQC88_RS07635 PF00009 Elongation factor Tu GTP binding domain JQC88_RS07640 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JQC88_RS07645 PF04296 Protein of unknown function (DUF448) JQC88_RS07650 PF00575 S1 RNA binding domain JQC88_RS07650 PF08529 NusA N-terminal domain JQC88_RS07650 PF13184 NusA-like KH domain JQC88_RS07655 PF02576 RimP N-terminal domain JQC88_RS07655 PF17384 RimP C-terminal SH3 domain JQC88_RS07660 PF11490 DNA polymerase III polC-type N-terminus II JQC88_RS07660 PF14579 Helix-hairpin-helix motif JQC88_RS07660 PF07733 Bacterial DNA polymerase III alpha NTPase domain JQC88_RS07660 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JQC88_RS07660 PF14480 DNA polymerase III polC-type N-terminus I JQC88_RS07660 PF02811 PHP domain JQC88_RS07660 PF00929 Exonuclease JQC88_RS07665 PF03129 Anticodon binding domain JQC88_RS07665 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JQC88_RS07665 PF04073 Aminoacyl-tRNA editing domain JQC88_RS07670 PF13180 PDZ domain JQC88_RS07670 PF02163 Peptidase family M50 JQC88_RS07680 PF01255 Putative undecaprenyl diphosphate synthase JQC88_RS07685 PF01765 Ribosome recycling factor JQC88_RS07690 PF00696 Amino acid kinase family JQC88_RS07695 PF00889 Elongation factor TS JQC88_RS07700 PF00318 Ribosomal protein S2 JQC88_RS07705 PF06018 CodY GAF-like domain JQC88_RS07705 PF08222 CodY helix-turn-helix domain JQC88_RS07710 PF00004 ATPase family associated with various cellular activities (AAA) JQC88_RS07710 PF07724 AAA domain (Cdc48 subfamily) JQC88_RS07710 PF10431 C-terminal, D2-small domain, of ClpB protein JQC88_RS07715 PF00227 Proteasome subunit JQC88_RS07720 PF00589 Phage integrase family JQC88_RS07720 PF02899 Phage integrase, N-terminal SAM-like domain JQC88_RS07725 PF01134 Glucose inhibited division protein A JQC88_RS07730 PF01751 Toprim domain JQC88_RS07730 PF01396 Topoisomerase DNA binding C4 zinc finger JQC88_RS07730 PF01131 DNA topoisomerase JQC88_RS07735 PF02481 DNA recombination-mediator protein A JQC88_RS07740 PF02629 CoA binding domain JQC88_RS07740 PF00549 CoA-ligase JQC88_RS07745 PF00549 CoA-ligase JQC88_RS07745 PF08442 ATP-grasp domain JQC88_RS07750 PF01351 Ribonuclease HII JQC88_RS07755 PF01926 50S ribosome-binding GTPase JQC88_RS07765 PF09586 Bacterial membrane protein YfhO JQC88_RS07775 PF01245 Ribosomal protein L19 JQC88_RS07780 PF01746 tRNA (Guanine-1)-methyltransferase JQC88_RS07785 PF05239 PRC-barrel domain JQC88_RS07785 PF01782 RimM N-terminal domain JQC88_RS07790 PF00886 Ribosomal protein S16 JQC88_RS07795 PF02881 SRP54-type protein, helical bundle domain JQC88_RS07795 PF02978 Signal peptide binding domain JQC88_RS07795 PF00448 SRP54-type protein, GTPase domain JQC88_RS07800 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JQC88_RS07805 PF02881 SRP54-type protein, helical bundle domain JQC88_RS07805 PF00448 SRP54-type protein, GTPase domain JQC88_RS07810 PF06470 SMC proteins Flexible Hinge Domain JQC88_RS07810 PF02463 RecF/RecN/SMC N terminal domain JQC88_RS07815 PF00035 Double-stranded RNA binding motif JQC88_RS07815 PF14622 Ribonuclease-III-like JQC88_RS07820 PF00550 Phosphopantetheine attachment site JQC88_RS07830 PF00698 Acyl transferase domain JQC88_RS07835 PF02504 Fatty acid synthesis protein JQC88_RS07845 PF00270 DEAD/DEAH box helicase JQC88_RS07845 PF17191 RecG wedge domain JQC88_RS07845 PF00271 Helicase conserved C-terminal domain JQC88_RS07850 PF13684 Dihydroxyacetone kinase family JQC88_RS07850 PF02734 DAK2 domain JQC88_RS07855 PF03780 Asp23 family, cell envelope-related function JQC88_RS07860 PF00830 Ribosomal L28 family JQC88_RS07870 PF00834 Ribulose-phosphate 3 epimerase family JQC88_RS07875 PF16745 RsgA N-terminal domain JQC88_RS07875 PF03193 RsgA GTPase JQC88_RS07880 PF03793 PASTA domain JQC88_RS07880 PF00069 Protein kinase domain JQC88_RS07890 PF04055 Radical SAM superfamily JQC88_RS07895 PF01029 NusB family JQC88_RS07895 PF01189 16S rRNA methyltransferase RsmB/F JQC88_RS07900 PF00551 Formyl transferase JQC88_RS07900 PF02911 Formyl transferase, C-terminal domain JQC88_RS07905 PF01327 Polypeptide deformylase JQC88_RS07915 PF17764 3′ DNA-binding domain (3′BD) JQC88_RS07915 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JQC88_RS07915 PF04851 Type III restriction enzyme, res subunit JQC88_RS07915 PF00271 Helicase conserved C-terminal domain JQC88_RS07915 PF18074 Primosomal protein N C-terminal domain JQC88_RS07920 PF02441 Flavoprotein JQC88_RS07920 PF04127 DNA / pantothenate metabolism flavoprotein JQC88_RS07925 PF01192 RNA polymerase Rpb6 JQC88_RS07930 PF00625 Guanylate kinase JQC88_RS07935 PF05670 NFACT protein RNA binding domain JQC88_RS07950 PF00156 Phosphoribosyl transferase domain JQC88_RS07955 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JQC88_RS07960 PF02142 MGS-like domain JQC88_RS07960 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JQC88_RS07960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQC88_RS07965 PF00117 Glutamine amidotransferase class-I JQC88_RS07965 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JQC88_RS07970 PF01979 Amidohydrolase family JQC88_RS07975 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JQC88_RS07975 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JQC88_RS07980 PF00860 Permease family JQC88_RS07985 PF00156 Phosphoribosyl transferase domain JQC88_RS07990 PF00849 RNA pseudouridylate synthase JQC88_RS07990 PF01479 S4 domain JQC88_RS07995 PF01252 Signal peptidase (SPase) II JQC88_RS08000 PF05257 CHAP domain JQC88_RS08000 PF01476 LysM domain JQC88_RS08010 PF08264 Anticodon-binding domain of tRNA JQC88_RS08010 PF00133 tRNA synthetases class I (I, L, M and V) JQC88_RS08010 PF06827 Zinc finger found in FPG and IleRS JQC88_RS08015 PF05103 DivIVA protein JQC88_RS08025 PF02325 YGGT family JQC88_RS08030 PF04472 Cell division protein SepF JQC88_RS08035 PF01168 Alanine racemase, N-terminal domain JQC88_RS08040 PF02578 Multi-copper polyphenol oxidoreductase laccase JQC88_RS08045 PF00091 Tubulin/FtsZ family, GTPase domain JQC88_RS08045 PF12327 FtsZ family, C-terminal domain JQC88_RS08050 PF02491 SHS2 domain inserted in FTSA JQC88_RS08055 PF08478 POTRA domain, FtsQ-type JQC88_RS08055 PF03799 Cell division protein FtsQ JQC88_RS08060 PF08245 Mur ligase middle domain JQC88_RS08060 PF02875 Mur ligase family, glutamate ligase domain JQC88_RS08065 PF00953 Glycosyl transferase family 4 JQC88_RS08070 PF03717 Penicillin-binding Protein dimerisation domain JQC88_RS08070 PF00905 Penicillin binding protein transpeptidase domain JQC88_RS08070 PF03793 PASTA domain JQC88_RS08075 PF04977 Septum formation initiator JQC88_RS08080 PF01795 MraW methylase family JQC88_RS08085 PF02381 MraZ protein, putative antitoxin-like JQC88_RS08090 PF10079 Bacillithiol biosynthesis BshC JQC88_RS08095 PF13673 Acetyltransferase (GNAT) domain JQC88_RS08100 PF13419 Haloacid dehalogenase-like hydrolase JQC88_RS08105 PF05480 Staphylococcus haemolytic protein JQC88_RS08110 PF05480 Staphylococcus haemolytic protein JQC88_RS08135 PF01725 Ham1 family JQC88_RS08140 PF01177 Asp/Glu/Hydantoin racemase JQC88_RS08145 PF13183 4Fe-4S dicluster domain JQC88_RS08145 PF13085 2Fe-2S iron-sulfur cluster binding domain JQC88_RS08150 PF02910 Fumarate reductase flavoprotein C-term JQC88_RS08150 PF00890 FAD binding domain JQC88_RS08155 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JQC88_RS08160 PF01541 GIY-YIG catalytic domain JQC88_RS08160 PF02151 UvrB/uvrC motif JQC88_RS08160 PF08459 UvrC Helix-hairpin-helix N-terminal JQC88_RS08165 PF00085 Thioredoxin JQC88_RS08170 PF00488 MutS domain V JQC88_RS08170 PF01713 Smr domain JQC88_RS08175 PF14716 Helix-hairpin-helix domain JQC88_RS08175 PF14791 DNA polymerase beta thumb JQC88_RS08175 PF02811 PHP domain JQC88_RS08185 PF05164 Cell division protein ZapA JQC88_RS08190 PF11858 Domain of unknown function (DUF3378) JQC88_RS08190 PF01351 Ribonuclease HII JQC88_RS08195 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JQC88_RS08195 PF03483 B3/4 domain JQC88_RS08195 PF03484 tRNA synthetase B5 domain JQC88_RS08195 PF03147 Ferredoxin-fold anticodon binding domain JQC88_RS08195 PF01588 Putative tRNA binding domain JQC88_RS08200 PF01409 tRNA synthetases class II core domain (F) JQC88_RS08200 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JQC88_RS08205 PF08032 RNA 2'-O ribose methyltransferase substrate binding JQC88_RS08205 PF00588 SpoU rRNA Methylase family JQC88_RS08210 PF04650 YSIRK type signal peptide JQC88_RS08210 PF17041 E domain JQC88_RS08210 PF07501 G5 domain JQC88_RS08210 PF00746 LPXTG cell wall anchor motif JQC88_RS08215 PF01783 Ribosomal L32p protein family JQC88_RS08225 PF05636 HIGH Nucleotidyl Transferase JQC88_RS08230 PF01467 Cytidylyltransferase-like JQC88_RS08245 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JQC88_RS08250 PF03009 Glycerophosphoryl diester phosphodiesterase family JQC88_RS08255 PF06133 Control of competence regulator ComK, YlbF/YmcA JQC88_RS08260 PF14504 CAP-associated N-terminal JQC88_RS08260 PF00188 Cysteine-rich secretory protein family JQC88_RS08270 PF01040 UbiA prenyltransferase family JQC88_RS08275 PF02628 Cytochrome oxidase assembly protein JQC88_RS08280 PF00364 Biotin-requiring enzyme JQC88_RS08280 PF02436 Conserved carboxylase domain JQC88_RS08280 PF00289 Biotin carboxylase, N-terminal domain JQC88_RS08280 PF02785 Biotin carboxylase C-terminal domain JQC88_RS08280 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JQC88_RS08280 PF00682 HMGL-like JQC88_RS08285 PF01098 Cell cycle protein JQC88_RS08290 PF07408 Protein of unknown function (DUF1507) JQC88_RS08300 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JQC88_RS08315 PF00009 Elongation factor Tu GTP binding domain JQC88_RS08315 PF03144 Elongation factor Tu domain 2 JQC88_RS08315 PF14492 Elongation Factor G, domain II JQC88_RS08315 PF00679 Elongation factor G C-terminus JQC88_RS08325 PF00459 Inositol monophosphatase family JQC88_RS08330 PF06335 Protein of unknown function (DUF1054) JQC88_RS08335 PF01566 Natural resistance-associated macrophage protein JQC88_RS08350 PF13416 Bacterial extracellular solute-binding protein JQC88_RS08360 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS08365 PF08402 TOBE domain JQC88_RS08365 PF00005 ABC transporter JQC88_RS08375 PF05256 Uncharacterised protein family (UPF0223) JQC88_RS08380 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS08380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQC88_RS08385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JQC88_RS08385 PF00364 Biotin-requiring enzyme JQC88_RS08385 PF02817 e3 binding domain JQC88_RS08390 PF02779 Transketolase, pyrimidine binding domain JQC88_RS08390 PF02780 Transketolase, C-terminal domain JQC88_RS08395 PF00676 Dehydrogenase E1 component JQC88_RS08405 PF01327 Polypeptide deformylase JQC88_RS08410 PF07288 Protein of unknown function (DUF1447) JQC88_RS08415 PF00753 Metallo-beta-lactamase superfamily JQC88_RS08415 PF17770 Ribonuclease J C-terminal domain JQC88_RS08415 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JQC88_RS08420 PF02080 TrkA-C domain JQC88_RS08420 PF02254 TrkA-N domain JQC88_RS08425 PF02322 Cytochrome bd terminal oxidase subunit II JQC88_RS08430 PF01654 Cytochrome bd terminal oxidase subunit I JQC88_RS08440 PF05524 PEP-utilising enzyme, N-terminal JQC88_RS08440 PF00391 PEP-utilising enzyme, mobile domain JQC88_RS08440 PF02896 PEP-utilising enzyme, TIM barrel domain JQC88_RS08445 PF00381 PTS HPr component phosphorylation site JQC88_RS08455 PF17785 PUA-like domain JQC88_RS08455 PF10672 S-adenosylmethionine-dependent methyltransferase JQC88_RS08470 PF06100 MCRA family JQC88_RS08480 PF00005 ABC transporter JQC88_RS08485 PF02361 Cobalt transport protein JQC88_RS08490 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JQC88_RS08490 PF02844 Phosphoribosylglycinamide synthetase, N domain JQC88_RS08490 PF02843 Phosphoribosylglycinamide synthetase, C domain JQC88_RS08495 PF01808 AICARFT/IMPCHase bienzyme JQC88_RS08495 PF02142 MGS-like domain JQC88_RS08500 PF00551 Formyl transferase JQC88_RS08505 PF00586 AIR synthase related protein, N-terminal domain JQC88_RS08505 PF02769 AIR synthase related protein, C-terminal domain JQC88_RS08510 PF13537 Glutamine amidotransferase domain JQC88_RS08510 PF00156 Phosphoribosyl transferase domain JQC88_RS08515 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JQC88_RS08515 PF02769 AIR synthase related protein, C-terminal domain JQC88_RS08515 PF00586 AIR synthase related protein, N-terminal domain JQC88_RS08525 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JQC88_RS08530 PF01259 SAICAR synthetase JQC88_RS08535 PF02222 ATP-grasp domain JQC88_RS08535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JQC88_RS08535 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JQC88_RS08540 PF00731 AIR carboxylase JQC88_RS08545 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JQC88_RS08545 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JQC88_RS08555 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JQC88_RS08560 PF00115 Cytochrome C and Quinol oxidase polypeptide I JQC88_RS08565 PF00510 Cytochrome c oxidase subunit III JQC88_RS08570 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JQC88_RS08575 PF01156 Inosine-uridine preferring nucleoside hydrolase JQC88_RS08580 PF00144 Beta-lactamase JQC88_RS08585 PF03816 Cell envelope-related transcriptional attenuator domain JQC88_RS08590 PF10804 Protein of unknown function (DUF2538) JQC88_RS08595 PF13673 Acetyltransferase (GNAT) domain JQC88_RS08600 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JQC88_RS08600 PF13457 GW (Gly-Tryp) dipeptide domain JQC88_RS08605 PF01047 MarR family JQC88_RS08610 PF01757 Acyltransferase family JQC88_RS08615 PF00155 Aminotransferase class I and II JQC88_RS08620 PF00378 Enoyl-CoA hydratase/isomerase JQC88_RS08625 PF12697 Alpha/beta hydrolase family JQC88_RS08630 PF16582 Middle domain of thiamine pyrophosphate JQC88_RS08630 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JQC88_RS08630 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JQC88_RS08635 PF00425 chorismate binding enzyme JQC88_RS08640 PF01040 UbiA prenyltransferase family JQC88_RS08645 PF13302 Acetyltransferase (GNAT) domain JQC88_RS08650 PF05154 TM2 domain JQC88_RS08675 PF01076 Plasmid recombination enzyme JQC88_RS08685 PF08460 Bacterial SH3 domain JQC88_RS08685 PF01520 N-acetylmuramoyl-L-alanine amidase JQC88_RS08685 PF05257 CHAP domain JQC88_RS08705 PF13457 GW (Gly-Tryp) dipeptide domain JQC88_RS08705 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JQC88_RS08730 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain JQC88_RS08730 PF12708 Pectate lyase superfamily protein JQC88_RS08815 PF17288 Terminase RNAseH like domain JQC88_RS08815 PF04466 Phage terminase large subunit JQC88_RS08865 PF00692 dUTPase JQC88_RS08905 PF00436 Single-strand binding protein family JQC88_RS08990 PF00589 Phage integrase family JQC88_RS09015 PF03099 Biotin/lipoate A/B protein ligase family JQC88_RS09015 PF10437 Bacterial lipoate protein ligase C-terminus JQC88_RS09020 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JQC88_RS09030 PF02872 5'-nucleotidase, C-terminal domain JQC88_RS09030 PF00149 Calcineurin-like phosphoesterase JQC88_RS09035 PF02386 Cation transport protein JQC88_RS09040 PF13180 PDZ domain JQC88_RS09045 PF03741 Integral membrane protein TerC family JQC88_RS09050 PF03144 Elongation factor Tu domain 2 JQC88_RS09050 PF16658 Class II release factor RF3, C-terminal domain JQC88_RS09050 PF00009 Elongation factor Tu GTP binding domain JQC88_RS09060 PF01225 Mur ligase family, catalytic domain JQC88_RS09060 PF02875 Mur ligase family, glutamate ligase domain JQC88_RS09060 PF08245 Mur ligase middle domain JQC88_RS09065 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JQC88_RS09065 PF04101 Glycosyltransferase family 28 C-terminal domain JQC88_RS09070 PF07690 Major Facilitator Superfamily JQC88_RS09080 PF00756 Putative esterase JQC88_RS09085 PF01594 AI-2E family transporter JQC88_RS09115 PF17760 UvrA interaction domain JQC88_RS09115 PF17755 UvrA DNA-binding domain JQC88_RS09145 PF00999 Sodium/hydrogen exchanger family JQC88_RS09145 PF02080 TrkA-C domain JQC88_RS09145 PF02254 TrkA-N domain JQC88_RS09150 PF00571 CBS domain JQC88_RS09150 PF01769 Divalent cation transporter JQC88_RS09150 PF03448 MgtE intracellular N domain JQC88_RS09155 PF00849 RNA pseudouridylate synthase JQC88_RS09160 PF01513 ATP-NAD kinase JQC88_RS09165 PF04607 Region found in RelA / SpoT proteins JQC88_RS09180 PF01152 Bacterial-like globin JQC88_RS09190 PF08439 Oligopeptidase F JQC88_RS09190 PF01432 Peptidase family M3 JQC88_RS09200 PF05389 Negative regulator of genetic competence (MecA) JQC88_RS09210 PF03960 ArsC family JQC88_RS09215 PF00579 tRNA synthetases class I (W and Y) JQC88_RS09220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JQC88_RS09225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JQC88_RS09225 PF00005 ABC transporter JQC88_RS09230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JQC88_RS09230 PF00005 ABC transporter JQC88_RS09235 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS09235 PF12911 N-terminal TM domain of oligopeptide transport permease C JQC88_RS09240 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS09250 PF00109 Beta-ketoacyl synthase, N-terminal domain JQC88_RS09250 PF02801 Beta-ketoacyl synthase, C-terminal domain JQC88_RS09255 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JQC88_RS09255 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JQC88_RS09265 PF17871 AAA lid domain JQC88_RS09265 PF07724 AAA domain (Cdc48 subfamily) JQC88_RS09265 PF00004 ATPase family associated with various cellular activities (AAA) JQC88_RS09265 PF02861 Clp amino terminal domain, pathogenicity island component JQC88_RS09265 PF10431 C-terminal, D2-small domain, of ClpB protein JQC88_RS09270 PF01757 Acyltransferase family JQC88_RS09275 PF01883 Iron-sulfur cluster assembly protein JQC88_RS09285 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS09285 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQC88_RS09300 PF07457 Protein of unknown function (DUF1516) JQC88_RS09305 PF01557 Fumarylacetoacetate (FAA) hydrolase family JQC88_RS09310 PF00580 UvrD/REP helicase N-terminal domain JQC88_RS09310 PF13361 UvrD-like helicase C-terminal domain JQC88_RS09310 PF12705 PD-(D/E)XK nuclease superfamily JQC88_RS09315 PF12705 PD-(D/E)XK nuclease superfamily JQC88_RS09315 PF13361 UvrD-like helicase C-terminal domain JQC88_RS09320 PF10502 Signal peptidase, peptidase S26 JQC88_RS09325 PF10502 Signal peptidase, peptidase S26 JQC88_RS09330 PF09335 SNARE associated Golgi protein JQC88_RS09335 PF00342 Phosphoglucose isomerase JQC88_RS09340 PF00764 Arginosuccinate synthase JQC88_RS09345 PF00206 Lyase JQC88_RS09345 PF14698 Argininosuccinate lyase C-terminal JQC88_RS09350 PF03009 Glycerophosphoryl diester phosphodiesterase family JQC88_RS09355 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JQC88_RS09355 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JQC88_RS09360 PF00202 Aminotransferase class-III JQC88_RS09375 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JQC88_RS09380 PF00575 S1 RNA binding domain JQC88_RS09385 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JQC88_RS09395 PF00361 Proton-conducting membrane transporter JQC88_RS09395 PF13244 Domain of unknown function (DUF4040) JQC88_RS09395 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JQC88_RS09400 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JQC88_RS09405 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JQC88_RS09410 PF00361 Proton-conducting membrane transporter JQC88_RS09415 PF01899 Na+/H+ ion antiporter subunit JQC88_RS09420 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JQC88_RS09425 PF03334 Na+/H+ antiporter subunit JQC88_RS09435 PF03061 Thioesterase superfamily JQC88_RS09440 PF13726 Na+-H+ antiporter family JQC88_RS09440 PF03553 Na+/H+ antiporter family JQC88_RS09445 PF02789 Cytosol aminopeptidase family, N-terminal domain JQC88_RS09445 PF00883 Cytosol aminopeptidase family, catalytic domain JQC88_RS09450 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS09455 PF01521 Iron-sulphur cluster biosynthesis JQC88_RS09460 PF07293 Protein of unknown function (DUF1450) JQC88_RS09465 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS09470 PF07315 Protein of unknown function (DUF1462) JQC88_RS09475 PF01106 NifU-like domain JQC88_RS09480 PF04914 DltD protein JQC88_RS09485 PF00550 Phosphopantetheine attachment site JQC88_RS09490 PF03062 MBOAT, membrane-bound O-acyltransferase family JQC88_RS09495 PF00501 AMP-binding enzyme JQC88_RS09495 PF13193 AMP-binding enzyme C-terminal domain JQC88_RS09505 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JQC88_RS09505 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JQC88_RS09510 PF13344 Haloacid dehalogenase-like hydrolase JQC88_RS09515 PF01934 Protein of unknown function DUF86 JQC88_RS09525 PF06265 Protein of unknown function (DUF1027) JQC88_RS09530 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JQC88_RS09530 PF04055 Radical SAM superfamily JQC88_RS09535 PF02872 5'-nucleotidase, C-terminal domain JQC88_RS09540 PF01925 Sulfite exporter TauE/SafE JQC88_RS09545 PF01904 Protein of unknown function DUF72 JQC88_RS09550 PF00571 CBS domain JQC88_RS09550 PF01595 Cyclin M transmembrane N-terminal domain JQC88_RS09550 PF03471 Transporter associated domain JQC88_RS09580 PF01458 Uncharacterized protein family (UPF0051) JQC88_RS09585 PF01592 NifU-like N terminal domain JQC88_RS09590 PF00266 Aminotransferase class-V JQC88_RS09595 PF01458 Uncharacterized protein family (UPF0051) JQC88_RS09600 PF00005 ABC transporter JQC88_RS09610 PF05532 CsbD-like JQC88_RS09620 PF03180 NLPA lipoprotein JQC88_RS09625 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS09630 PF09383 NIL domain JQC88_RS09630 PF00005 ABC transporter JQC88_RS09640 PF01751 Toprim domain JQC88_RS09645 PF01597 Glycine cleavage H-protein JQC88_RS09650 PF03960 ArsC family JQC88_RS09655 PF00085 Thioredoxin JQC88_RS09665 PF01487 Type I 3-dehydroquinase JQC88_RS09670 PF02566 OsmC-like protein JQC88_RS09685 PF00300 Histidine phosphatase superfamily (branch 1) JQC88_RS09715 PF05908 Poly-gamma-glutamate hydrolase JQC88_RS09730 PF00313 'Cold-shock' DNA-binding domain JQC88_RS09740 PF16916 Dimerisation domain of Zinc Transporter JQC88_RS09740 PF01545 Cation efflux family JQC88_RS09760 PF02386 Cation transport protein JQC88_RS09790 PF01668 SmpB protein JQC88_RS09795 PF00575 S1 RNA binding domain JQC88_RS09795 PF08206 Ribonuclease B OB domain JQC88_RS09795 PF17876 Cold shock domain JQC88_RS09795 PF00773 RNB domain JQC88_RS09800 PF12146 Serine aminopeptidase, S33 JQC88_RS09805 PF03840 Preprotein translocase SecG subunit JQC88_RS09815 PF03952 Enolase, N-terminal domain JQC88_RS09815 PF00113 Enolase, C-terminal TIM barrel domain JQC88_RS09820 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JQC88_RS09820 PF01676 Metalloenzyme superfamily JQC88_RS09825 PF00121 Triosephosphate isomerase JQC88_RS09830 PF00162 Phosphoglycerate kinase JQC88_RS09835 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JQC88_RS09835 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JQC88_RS09840 PF04198 Putative sugar-binding domain JQC88_RS09855 PF08338 Domain of unknown function (DUF1731) JQC88_RS09855 PF01370 NAD dependent epimerase/dehydratase family JQC88_RS09865 PF00574 Clp protease JQC88_RS09875 PF10298 WhiA N-terminal LAGLIDADG-like domain JQC88_RS09875 PF02650 WhiA C-terminal HTH domain JQC88_RS09875 PF14527 WhiA LAGLIDADG-like domain JQC88_RS09880 PF01933 Uncharacterised protein family UPF0052 JQC88_RS09885 PF03668 P-loop ATPase protein family JQC88_RS09890 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS09900 PF14602 Hexapeptide repeat of succinyl-transferase JQC88_RS09905 PF01790 Prolipoprotein diacylglyceryl transferase JQC88_RS09910 PF02603 HPr Serine kinase N terminus JQC88_RS09910 PF07475 HPr Serine kinase C-terminal domain JQC88_RS09915 PF17760 UvrA interaction domain JQC88_RS09915 PF17755 UvrA DNA-binding domain JQC88_RS09915 PF00005 ABC transporter JQC88_RS09920 PF02151 UvrB/uvrC motif JQC88_RS09920 PF17757 UvrB interaction domain JQC88_RS09920 PF04851 Type III restriction enzyme, res subunit JQC88_RS09920 PF00271 Helicase conserved C-terminal domain JQC88_RS09920 PF12344 Ultra-violet resistance protein B JQC88_RS09935 PF01476 LysM domain JQC88_RS09935 PF05257 CHAP domain JQC88_RS09945 PF07517 SecA DEAD-like domain JQC88_RS09945 PF01043 SecA preprotein cross-linking domain JQC88_RS09945 PF02810 SEC-C motif JQC88_RS09945 PF07516 SecA Wing and Scaffold domain JQC88_RS09950 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JQC88_RS09950 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JQC88_RS09960 PF04851 Type III restriction enzyme, res subunit JQC88_RS09960 PF00271 Helicase conserved C-terminal domain JQC88_RS09965 PF02645 Uncharacterised protein, DegV family COG1307 JQC88_RS09970 PF09186 Domain of unknown function (DUF1949) JQC88_RS09970 PF01205 Uncharacterized protein family UPF0029 JQC88_RS09975 PF00953 Glycosyl transferase family 4 JQC88_RS09980 PF07694 5TMR of 5TMR-LYT JQC88_RS09980 PF00990 Diguanylate cyclase, GGDEF domain JQC88_RS09995 PF07687 Peptidase dimerisation domain JQC88_RS09995 PF01546 Peptidase family M20/M25/M40 JQC88_RS10000 PF02595 Glycerate kinase family JQC88_RS10020 PF01565 FAD binding domain JQC88_RS10020 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JQC88_RS10035 PF00005 ABC transporter JQC88_RS10040 PF01032 FecCD transport family JQC88_RS10045 PF01032 FecCD transport family JQC88_RS10055 PF00268 Ribonucleotide reductase, small chain JQC88_RS10060 PF08343 Ribonucleotide reductase N-terminal JQC88_RS10060 PF02867 Ribonucleotide reductase, barrel domain JQC88_RS10060 PF00317 Ribonucleotide reductase, all-alpha domain JQC88_RS10065 PF07972 NrdI Flavodoxin like JQC88_RS10075 PF14489 QueF-like protein JQC88_RS10080 PF00854 POT family JQC88_RS10090 PF00781 Diacylglycerol kinase catalytic domain JQC88_RS10095 PF00171 Aldehyde dehydrogenase family JQC88_RS10095 PF00465 Iron-containing alcohol dehydrogenase JQC88_RS10100 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) JQC88_RS10105 PF00155 Aminotransferase class I and II JQC88_RS10110 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS10115 PF00005 ABC transporter JQC88_RS10115 PF00571 CBS domain JQC88_RS10120 PF00270 DEAD/DEAH box helicase JQC88_RS10120 PF16124 RecQ zinc-binding JQC88_RS10120 PF00271 Helicase conserved C-terminal domain JQC88_RS10120 PF09382 RQC domain JQC88_RS10120 PF00570 HRDC domain JQC88_RS10125 PF12848 ABC transporter JQC88_RS10125 PF16326 ABC transporter C-terminal domain JQC88_RS10125 PF00005 ABC transporter JQC88_RS10130 PF02535 ZIP Zinc transporter JQC88_RS10140 PF00884 Sulfatase JQC88_RS10150 PF02682 Carboxyltransferase domain, subdomain C and D JQC88_RS10165 PF04715 Anthranilate synthase component I, N terminal region JQC88_RS10165 PF00425 chorismate binding enzyme JQC88_RS10170 PF00117 Glutamine amidotransferase class-I JQC88_RS10175 PF06508 Queuosine biosynthesis protein QueC JQC88_RS10180 PF01242 6-pyruvoyl tetrahydropterin synthase JQC88_RS10185 PF04055 Radical SAM superfamily JQC88_RS10210 PF00486 Transcriptional regulatory protein, C terminal JQC88_RS10210 PF00072 Response regulator receiver domain JQC88_RS10215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS10215 PF00512 His Kinase A (phospho-acceptor) domain JQC88_RS10220 PF00535 Glycosyl transferase family 2 JQC88_RS10225 PF00248 Aldo/keto reductase family JQC88_RS10230 PF03471 Transporter associated domain JQC88_RS10230 PF01595 Cyclin M transmembrane N-terminal domain JQC88_RS10230 PF00571 CBS domain JQC88_RS10235 PF01979 Amidohydrolase family JQC88_RS10240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JQC88_RS10240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JQC88_RS10245 PF00294 pfkB family carbohydrate kinase JQC88_RS10250 PF00455 DeoR C terminal sensor domain JQC88_RS10250 PF08220 DeoR-like helix-turn-helix domain JQC88_RS10255 PF04073 Aminoacyl-tRNA editing domain JQC88_RS10265 PF07690 Major Facilitator Superfamily JQC88_RS10280 PF00875 DNA photolyase JQC88_RS10280 PF03441 FAD binding domain of DNA photolyase JQC88_RS10285 PF00939 Sodium:sulfate symporter transmembrane region JQC88_RS10290 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JQC88_RS10290 PF00056 lactate/malate dehydrogenase, NAD binding domain JQC88_RS10300 PF02492 CobW/HypB/UreG, nucleotide-binding domain JQC88_RS10300 PF07683 Cobalamin synthesis protein cobW C-terminal domain JQC88_RS10305 PF01047 MarR family JQC88_RS10310 PF00664 ABC transporter transmembrane region JQC88_RS10310 PF00005 ABC transporter JQC88_RS10315 PF00005 ABC transporter JQC88_RS10315 PF00664 ABC transporter transmembrane region JQC88_RS10320 PF02673 Bacitracin resistance protein BacA JQC88_RS10335 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JQC88_RS10340 PF03641 Possible lysine decarboxylase JQC88_RS10365 PF04306 Protein of unknown function (DUF456) JQC88_RS10370 PF07690 Major Facilitator Superfamily JQC88_RS10375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQC88_RS10375 PF03466 LysR substrate binding domain JQC88_RS10390 PF00042 Globin JQC88_RS10390 PF00175 Oxidoreductase NAD-binding domain JQC88_RS10390 PF00970 Oxidoreductase FAD-binding domain JQC88_RS10395 PF04405 Domain of Unknown function (DUF542) JQC88_RS10395 PF01814 Hemerythrin HHE cation binding domain JQC88_RS10405 PF01709 Transcriptional regulator JQC88_RS10425 PF05257 CHAP domain JQC88_RS10425 PF01476 LysM domain JQC88_RS10430 PF01384 Phosphate transporter family JQC88_RS10435 PF01865 Protein of unknown function DUF47 JQC88_RS10440 PF02687 FtsX-like permease family JQC88_RS10445 PF00005 ABC transporter JQC88_RS10450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JQC88_RS10455 PF00486 Transcriptional regulatory protein, C terminal JQC88_RS10455 PF00072 Response regulator receiver domain JQC88_RS10460 PF01370 NAD dependent epimerase/dehydratase family JQC88_RS10485 PF00005 ABC transporter JQC88_RS10490 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JQC88_RS10490 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JQC88_RS10495 PF01773 Na+ dependent nucleoside transporter N-terminus JQC88_RS10495 PF07662 Na+ dependent nucleoside transporter C-terminus JQC88_RS10500 PF00005 ABC transporter JQC88_RS10500 PF00664 ABC transporter transmembrane region JQC88_RS10505 PF01467 Cytidylyltransferase-like JQC88_RS10510 PF00535 Glycosyl transferase family 2 JQC88_RS10515 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JQC88_RS10520 PF01061 ABC-2 type transporter JQC88_RS10525 PF00005 ABC transporter JQC88_RS10530 PF03808 Glycosyl transferase WecB/TagA/CpsF family JQC88_RS10540 PF02742 Iron dependent repressor, metal binding and dimerisation domain JQC88_RS10540 PF01325 Iron dependent repressor, N-terminal DNA binding domain JQC88_RS10540 PF18357 Diphteria toxin repressor SH3 domain JQC88_RS10545 PF00005 ABC transporter JQC88_RS10550 PF00950 ABC 3 transport family JQC88_RS10555 PF01297 Zinc-uptake complex component A periplasmic JQC88_RS10560 PF00999 Sodium/hydrogen exchanger family JQC88_RS10565 PF03334 Na+/H+ antiporter subunit JQC88_RS10570 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) JQC88_RS10575 PF01899 Na+/H+ ion antiporter subunit JQC88_RS10580 PF00361 Proton-conducting membrane transporter JQC88_RS10585 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JQC88_RS10590 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter JQC88_RS10595 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JQC88_RS10595 PF00361 Proton-conducting membrane transporter JQC88_RS10595 PF13244 Domain of unknown function (DUF4040) JQC88_RS10625 PF00561 alpha/beta hydrolase fold JQC88_RS10645 PF13419 Haloacid dehalogenase-like hydrolase JQC88_RS10650 PF01032 FecCD transport family JQC88_RS10655 PF01497 Periplasmic binding protein JQC88_RS10660 PF13411 MerR HTH family regulatory protein JQC88_RS10660 PF07739 TipAS antibiotic-recognition domain JQC88_RS10665 PF00633 Helix-hairpin-helix motif JQC88_RS10665 PF10576 Iron-sulfur binding domain of endonuclease III JQC88_RS10665 PF00730 HhH-GPD superfamily base excision DNA repair protein JQC88_RS10670 PF03485 Arginyl tRNA synthetase N terminal domain JQC88_RS10670 PF05746 DALR anticodon binding domain JQC88_RS10670 PF00750 tRNA synthetases class I (R) JQC88_RS10685 PF00107 Zinc-binding dehydrogenase JQC88_RS10685 PF08240 Alcohol dehydrogenase GroES-like domain JQC88_RS10690 PF09861 Lactate racemase N-terminal domain JQC88_RS10695 PF02540 NAD synthase JQC88_RS10700 PF00731 AIR carboxylase JQC88_RS10705 PF01969 Protein of unknown function DUF111 JQC88_RS10710 PF08741 YwhD family JQC88_RS10715 PF01966 HD domain JQC88_RS10725 PF00248 Aldo/keto reductase family JQC88_RS10735 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS10735 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JQC88_RS10740 PF07293 Protein of unknown function (DUF1450) JQC88_RS10745 PF08544 GHMP kinases C terminal JQC88_RS10745 PF00288 GHMP kinases N terminal domain JQC88_RS10755 PF00288 GHMP kinases N terminal domain JQC88_RS10760 PF03099 Biotin/lipoate A/B protein ligase family JQC88_RS10765 PF01515 Phosphate acetyl/butaryl transferase JQC88_RS10770 PF06778 Chlorite dismutase JQC88_RS10790 PF13520 Amino acid permease JQC88_RS10795 PF04241 Protein of unknown function (DUF423) JQC88_RS10805 PF03167 Uracil DNA glycosylase superfamily JQC88_RS10815 PF08543 Phosphomethylpyrimidine kinase JQC88_RS10820 PF17412 Family of unknown function JQC88_RS10835 PF00108 Thiolase, N-terminal domain JQC88_RS10835 PF02803 Thiolase, C-terminal domain JQC88_RS10840 PF00501 AMP-binding enzyme JQC88_RS10850 PF01380 SIS domain JQC88_RS10855 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JQC88_RS10860 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JQC88_RS10870 PF02585 GlcNAc-PI de-N-acetylase JQC88_RS10875 PF02649 Type I GTP cyclohydrolase folE2 JQC88_RS10895 PF04650 YSIRK type signal peptide JQC88_RS10895 PF17210 SdrD B-like domain JQC88_RS10895 PF00746 LPXTG cell wall anchor motif JQC88_RS10895 PF17961 Bacterial Ig domain JQC88_RS10895 PF10425 C-terminus of bacterial fibrinogen-binding adhesin JQC88_RS10900 PF03358 NADPH-dependent FMN reductase JQC88_RS10910 PF14437 MafB19-like deaminase JQC88_RS10915 PF01712 Deoxynucleoside kinase JQC88_RS10920 PF01712 Deoxynucleoside kinase JQC88_RS10930 PF00296 Luciferase-like monooxygenase JQC88_RS10935 PF13419 Haloacid dehalogenase-like hydrolase JQC88_RS10940 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JQC88_RS10945 PF08240 Alcohol dehydrogenase GroES-like domain JQC88_RS10945 PF00107 Zinc-binding dehydrogenase JQC88_RS10950 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JQC88_RS10955 PF01063 Amino-transferase class IV JQC88_RS10960 PF01370 NAD dependent epimerase/dehydratase family JQC88_RS10970 PF02423 Ornithine cyclodeaminase/mu-crystallin family JQC88_RS10980 PF01546 Peptidase family M20/M25/M40 JQC88_RS10980 PF07687 Peptidase dimerisation domain JQC88_RS10985 PF00009 Elongation factor Tu GTP binding domain JQC88_RS10985 PF03144 Elongation factor Tu domain 2 JQC88_RS10985 PF03143 Elongation factor Tu C-terminal domain JQC88_RS10990 PF00009 Elongation factor Tu GTP binding domain JQC88_RS10990 PF03144 Elongation factor Tu domain 2 JQC88_RS10990 PF14492 Elongation Factor G, domain II JQC88_RS10990 PF00679 Elongation factor G C-terminus JQC88_RS10990 PF03764 Elongation factor G, domain IV JQC88_RS10995 PF00177 Ribosomal protein S7p/S5e JQC88_RS11000 PF00164 Ribosomal protein S12/S23 JQC88_RS11005 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JQC88_RS11010 PF00623 RNA polymerase Rpb1, domain 2 JQC88_RS11010 PF04983 RNA polymerase Rpb1, domain 3 JQC88_RS11010 PF04998 RNA polymerase Rpb1, domain 5 JQC88_RS11010 PF04997 RNA polymerase Rpb1, domain 1 JQC88_RS11010 PF05000 RNA polymerase Rpb1, domain 4 JQC88_RS11015 PF04560 RNA polymerase Rpb2, domain 7 JQC88_RS11015 PF00562 RNA polymerase Rpb2, domain 6 JQC88_RS11015 PF10385 RNA polymerase beta subunit external 1 domain JQC88_RS11015 PF04565 RNA polymerase Rpb2, domain 3 JQC88_RS11015 PF04561 RNA polymerase Rpb2, domain 2 JQC88_RS11015 PF04563 RNA polymerase beta subunit JQC88_RS11020 PF05175 Methyltransferase small domain JQC88_RS11025 PF16320 Ribosomal protein L7/L12 dimerisation domain JQC88_RS11025 PF00542 Ribosomal protein L7/L12 C-terminal domain JQC88_RS11030 PF00466 Ribosomal protein L10 JQC88_RS11035 PF00687 Ribosomal protein L1p/L10e family JQC88_RS11040 PF00298 Ribosomal protein L11, RNA binding domain JQC88_RS11040 PF03946 Ribosomal protein L11, N-terminal domain JQC88_RS11045 PF02357 Transcription termination factor nusG JQC88_RS11050 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JQC88_RS11055 PF00471 Ribosomal protein L33 JQC88_RS11065 PF05991 YacP-like NYN domain JQC88_RS11070 PF00588 SpoU rRNA Methylase family JQC88_RS11070 PF08032 RNA 2'-O ribose methyltransferase substrate binding JQC88_RS11075 PF00636 Ribonuclease III domain JQC88_RS11080 PF01406 tRNA synthetases class I (C) catalytic domain JQC88_RS11080 PF09190 DALR domain JQC88_RS11085 PF00132 Bacterial transferase hexapeptide (six repeats) JQC88_RS11090 PF00749 tRNA synthetases class I (E and Q), catalytic domain JQC88_RS11100 PF18073 Rubredoxin metal binding domain JQC88_RS11105 PF07724 AAA domain (Cdc48 subfamily) JQC88_RS11105 PF17871 AAA lid domain JQC88_RS11105 PF00004 ATPase family associated with various cellular activities (AAA) JQC88_RS11105 PF02861 Clp amino terminal domain, pathogenicity island component JQC88_RS11105 PF10431 C-terminal, D2-small domain, of ClpB protein JQC88_RS11110 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JQC88_RS11120 PF05848 CtsR N-terminal HTH domain JQC88_RS11120 PF17727 CtsR C-terminal dimerization domain JQC88_RS11125 PF07662 Na+ dependent nucleoside transporter C-terminus JQC88_RS11125 PF01773 Na+ dependent nucleoside transporter N-terminus JQC88_RS11135 PF01174 SNO glutamine amidotransferase family JQC88_RS11140 PF01680 SOR/SNZ family JQC88_RS11145 PF00392 Bacterial regulatory proteins, gntR family JQC88_RS11145 PF00155 Aminotransferase class I and II JQC88_RS11230 PF01336 OB-fold nucleic acid binding domain JQC88_RS11230 PF00152 tRNA synthetases class II (D, K and N) JQC88_RS11235 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JQC88_RS11240 PF02152 Dihydroneopterin aldolase JQC88_RS11245 PF00809 Pterin binding enzyme JQC88_RS11250 PF00291 Pyridoxal-phosphate dependent enzyme JQC88_RS11255 PF01430 Hsp33 protein JQC88_RS11260 PF06480 FtsH Extracellular JQC88_RS11260 PF01434 Peptidase family M41 JQC88_RS11260 PF00004 ATPase family associated with various cellular activities (AAA) JQC88_RS11260 PF17862 AAA+ lid domain JQC88_RS11265 PF00156 Phosphoribosyl transferase domain JQC88_RS11270 PF01171 PP-loop family JQC88_RS11270 PF11734 TilS substrate C-terminal domain JQC88_RS11275 PF00575 S1 RNA binding domain JQC88_RS11285 PF01479 S4 domain JQC88_RS11290 PF03819 MazG nucleotide pyrophosphohydrolase domain JQC88_RS11290 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQC88_RS11295 PF14667 Polysaccharide biosynthesis C-terminal domain JQC88_RS11295 PF01943 Polysaccharide biosynthesis protein JQC88_RS11300 PF03461 TRCF domain JQC88_RS11300 PF17757 UvrB interaction domain JQC88_RS11300 PF02559 CarD-like/TRCF domain JQC88_RS11300 PF00271 Helicase conserved C-terminal domain JQC88_RS11300 PF00270 DEAD/DEAH box helicase JQC88_RS11305 PF01195 Peptidyl-tRNA hydrolase JQC88_RS11310 PF01386 Ribosomal L25p family JQC88_RS11310 PF14693 Ribosomal protein TL5, C-terminal domain JQC88_RS11315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JQC88_RS11315 PF14572 Phosphoribosyl synthetase-associated domain JQC88_RS11320 PF00483 Nucleotidyl transferase JQC88_RS11320 PF00132 Bacterial transferase hexapeptide (six repeats) JQC88_RS11325 PF04026 SpoVG JQC88_RS11330 PF01042 Endoribonuclease L-PSP JQC88_RS11335 PF09182 Bacterial purine repressor, N-terminal JQC88_RS11335 PF00156 Phosphoribosyl transferase domain JQC88_RS11340 PF00288 GHMP kinases N terminal domain JQC88_RS11340 PF08544 GHMP kinases C terminal JQC88_RS11345 PF06257 Biofilm formation stimulator VEG JQC88_RS11350 PF00398 Ribosomal RNA adenine dimethylase JQC88_RS11355 PF13331 Domain of unknown function (DUF4093) JQC88_RS11355 PF01751 Toprim domain JQC88_RS11360 PF01026 TatD related DNase JQC88_RS11365 PF01588 Putative tRNA binding domain JQC88_RS11365 PF09334 tRNA synthetases class I (M) JQC88_RS11365 PF08264 Anticodon-binding domain of tRNA JQC88_RS11370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JQC88_RS11375 PF01541 GIY-YIG catalytic domain JQC88_RS11380 PF05175 Methyltransferase small domain JQC88_RS11385 PF06156 Initiation control protein YabA JQC88_RS11390 PF04468 PSP1 C-terminal conserved region JQC88_RS11395 PF09115 DNA polymerase III, delta subunit, C terminal JQC88_RS11400 PF06153 Cyclic-di-AMP receptor JQC88_RS11405 PF02223 Thymidylate kinase JQC88_RS11410 PF01276 Orn/Lys/Arg decarboxylase, major domain JQC88_RS11410 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JQC88_RS11415 PF13302 Acetyltransferase (GNAT) domain JQC88_RS11435 PF02132 RecR protein JQC88_RS11435 PF13662 Toprim domain JQC88_RS11440 PF02575 YbaB/EbfC DNA-binding family JQC88_RS11445 PF12169 DNA polymerase III subunits gamma and tau domain III JQC88_RS11460 PF03601 Conserved hypothetical protein 698 JQC88_RS11465 PF03466 LysR substrate binding domain JQC88_RS11465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQC88_RS11475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JQC88_RS11475 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS11480 PF01493 GXGXG motif JQC88_RS11480 PF01645 Conserved region in glutamate synthase JQC88_RS11480 PF00310 Glutamine amidotransferases class-II JQC88_RS11480 PF04898 Glutamate synthase central domain JQC88_RS11485 PF03466 LysR substrate binding domain JQC88_RS11485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JQC88_RS11500 PF00293 NUDIX domain JQC88_RS11510 PF00534 Glycosyl transferases group 1 JQC88_RS11510 PF09318 Glycosyl transferase 1 domain A JQC88_RS11515 PF05257 CHAP domain JQC88_RS11515 PF01476 LysM domain JQC88_RS11520 PF03180 NLPA lipoprotein JQC88_RS11525 PF00528 Binding-protein-dependent transport system inner membrane component JQC88_RS11530 PF00005 ABC transporter JQC88_RS11530 PF09383 NIL domain JQC88_RS11535 PF01053 Cys/Met metabolism PLP-dependent enzyme JQC88_RS11540 PF00291 Pyridoxal-phosphate dependent enzyme JQC88_RS11550 PF00209 Sodium:neurotransmitter symporter family JQC88_RS11560 PF12146 Serine aminopeptidase, S33 JQC88_RS11575 PF10057 Uncharacterized conserved protein (DUF2294) JQC88_RS11580 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JQC88_RS11585 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JQC88_RS11585 PF00361 Proton-conducting membrane transporter JQC88_RS11605 PF02492 CobW/HypB/UreG, nucleotide-binding domain JQC88_RS11605 PF07683 Cobalamin synthesis protein cobW C-terminal domain JQC88_RS11625 PF01022 Bacterial regulatory protein, arsR family JQC88_RS11665 PF00117 Glutamine amidotransferase class-I JQC88_RS11665 PF00958 GMP synthase C terminal domain JQC88_RS11670 PF00571 CBS domain JQC88_RS11670 PF00478 IMP dehydrogenase / GMP reductase domain JQC88_RS11675 PF00860 Permease family JQC88_RS11685 PF11181 Heat induced stress protein YflT JQC88_RS11700 PF00375 Sodium:dicarboxylate symporter family JQC88_RS11705 PF00881 Nitroreductase family JQC88_RS11715 PF00578 AhpC/TSA family JQC88_RS11720 PF07992 Pyridine nucleotide-disulphide oxidoreductase JQC88_RS11720 PF13192 Thioredoxin domain JQC88_RS11735 PF00300 Histidine phosphatase superfamily (branch 1) JQC88_RS11740 PF01810 LysE type translocator JQC88_RS11755 PF01084 Ribosomal protein S18 JQC88_RS11760 PF00436 Single-strand binding protein family JQC88_RS11765 PF01250 Ribosomal protein S6 JQC88_RS11780 PF06071 Protein of unknown function (DUF933) JQC88_RS11780 PF01926 50S ribosome-binding GTPase JQC88_RS11785 PF06107 Bacterial protein of unknown function (DUF951) JQC88_RS11790 PF00924 Mechanosensitive ion channel JQC88_RS11795 PF17762 HTH domain found in ParB protein JQC88_RS11795 PF02195 ParB-like nuclease domain JQC88_RS11800 PF01053 Cys/Met metabolism PLP-dependent enzyme JQC88_RS11805 PF01053 Cys/Met metabolism PLP-dependent enzyme JQC88_RS11810 PF02574 Homocysteine S-methyltransferase JQC88_RS11810 PF02219 Methylenetetrahydrofolate reductase JQC88_RS11815 PF01717 Cobalamin-independent synthase, Catalytic domain JQC88_RS11815 PF08267 Cobalamin-independent synthase, N-terminal domain JQC88_RS11825 PF00108 Thiolase, N-terminal domain JQC88_RS11825 PF02803 Thiolase, C-terminal domain JQC88_RS11840 PF01381 Helix-turn-helix JQC88_RS11855 PF17210 SdrD B-like domain JQC88_RS11855 PF17961 Bacterial Ig domain JQC88_RS11855 PF00746 LPXTG cell wall anchor motif JQC88_RS11855 PF04650 YSIRK type signal peptide JQC88_RS11865 PF10502 Signal peptidase, peptidase S26 JQC88_RS11880 PF00005 ABC transporter JQC88_RS11885 PF02687 FtsX-like permease family JQC88_RS11895 PF04650 YSIRK type signal peptide JQC88_RS11900 PF12704 MacB-like periplasmic core domain JQC88_RS11900 PF02687 FtsX-like permease family JQC88_RS11905 PF00005 ABC transporter JQC88_RS11940 PF17762 HTH domain found in ParB protein JQC88_RS11940 PF02195 ParB-like nuclease domain JQC88_RS11945 PF02527 rRNA small subunit methyltransferase G JQC88_RS11950 PF01134 Glucose inhibited division protein A JQC88_RS11950 PF13932 GidA associated domain JQC88_RS11955 PF10396 GTP-binding protein TrmE N-terminus JQC88_RS11955 PF01926 50S ribosome-binding GTPase JQC88_RS11955 PF12631 MnmE helical domain JQC88_RS11960 PF00825 Ribonuclease P JQC88_RS11965 PF00468 Ribosomal protein L34 JQC88_RS11990 PF01446 Replication protein JQC88_RS11995 PF10706 Aminoglycoside-2''-adenylyltransferase JQC88_RS12005 PF07827 KNTase C-terminal domain JQC88_RS12010 PF13610 DDE domain JQC88_RS12015 PF01022 Bacterial regulatory protein, arsR family JQC88_RS12050 PF00664 ABC transporter transmembrane region JQC88_RS12050 PF03412 Peptidase C39 family JQC88_RS12050 PF00005 ABC transporter JQC88_RS12055 PF02796 Helix-turn-helix domain of resolvase JQC88_RS12055 PF00239 Resolvase, N terminal domain JQC88_RS12060 PF13610 DDE domain JQC88_RS12070 PF00583 Acetyltransferase (GNAT) family JQC88_RS12075 PF01636 Phosphotransferase enzyme family JQC88_RS12080 PF13610 DDE domain JQC88_RS12085 PF08360 QacR-like protein, C-terminal region JQC88_RS12085 PF00440 Bacterial regulatory proteins, tetR family JQC88_RS12090 PF07690 Major Facilitator Superfamily JQC88_RS12110 PF08264 Anticodon-binding domain of tRNA JQC88_RS12110 PF00133 tRNA synthetases class I (I, L, M and V) JQC88_RS12115 PF03881 Fructosamine kinase JQC88_RS12120 PF07690 Major Facilitator Superfamily JQC88_RS12125 PF13610 DDE domain JQC88_RS12145 PF02796 Helix-turn-helix domain of resolvase JQC88_RS12145 PF00239 Resolvase, N terminal domain JQC88_RS12175 PF01446 Replication protein JQC88_RS12190 PF01381 Helix-turn-helix JQC88_RS12220 PF01051 Initiator Replication protein JQC88_RS12225 PF10502 Signal peptidase, peptidase S26 JQC88_RS12270 PF01076 Plasmid recombination enzyme