SE1039_RS00020 SM01228 SE1039_RS00020 SE1039_RS00030 SM00470 ParB-like nuclease domain SE1039_RS00040 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS00065 SM00899 SE1039_RS00065 SE1039_RS00175 SM00422 helix_turn_helix, mercury resistance SE1039_RS00190 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain SE1039_RS00220 SM00345 helix_turn_helix gluconate operon transcriptional repressor SE1039_RS00220 SM00895 SE1039_RS00220 SE1039_RS00225 SM01329 SE1039_RS00225 SE1039_RS00265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SE1039_RS00315 SM00882 Coenzyme A transferase SE1039_RS00355 SM00850 LytTr DNA-binding domain SE1039_RS00385 SM00470 ParB-like nuclease domain SE1039_RS00465 SM00014 Acid phosphatase homologues SE1039_RS00485 SM00382 ATPases associated with a variety of cellular activities SE1039_RS00500 SM01060 SE1039_RS00500 SE1039_RS00515 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS00565 SM00382 ATPases associated with a variety of cellular activities SE1039_RS00605 SM00422 helix_turn_helix, mercury resistance SE1039_RS00625 SM00823 Phosphopantetheine attachment site SE1039_RS00640 SM00834 Putative regulatory protein SE1039_RS00705 SM00257 Lysin motif SE1039_RS00705 SM00644 SE1039_RS00705 SE1039_RS00790 SM00855 Phosphoglycerate mutase family SE1039_RS00820 SM00382 ATPases associated with a variety of cellular activities SE1039_RS00825 SM00850 LytTr DNA-binding domain SE1039_RS00830 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS00835 SM01060 SE1039_RS00835 SE1039_RS00890 SM00116 Domain in cystathionine beta-synthase and other proteins. SE1039_RS00890 SM01240 SE1039_RS00890 SE1039_RS00920 SM00901 SE1039_RS00920 SE1039_RS00935 SM00382 ATPases associated with a variety of cellular activities SE1039_RS00970 SM00357 Cold shock protein domain SE1039_RS01010 SM00855 Phosphoglycerate mutase family SE1039_RS01060 SM00257 Lysin motif SE1039_RS01115 SM00642 Alpha-amylase domain SE1039_RS01120 SM00345 helix_turn_helix gluconate operon transcriptional repressor SE1039_RS01120 SM00866 SE1039_RS01120 SE1039_RS01130 SM00382 ATPases associated with a variety of cellular activities SE1039_RS01140 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SE1039_RS01140 SM00493 SE1039_RS01140 SE1039_RS01215 SM00465 GIY-YIG type nucleases (URI domain) SE1039_RS01235 SM00493 SE1039_RS01235 SE1039_RS01240 SM00650 Ribosomal RNA adenine dimethylases SE1039_RS01275 SM01400 SE1039_RS01275 SE1039_RS01290 SM00487 DEAD-like helicases superfamily SE1039_RS01290 SM00490 helicase superfamily c-terminal domain SE1039_RS01290 SM00982 SE1039_RS01290 SE1039_RS01290 SM01058 CarD-like/TRCF domain SE1039_RS01305 SM00363 S4 RNA-binding domain SE1039_RS01315 SM00316 Ribosomal protein S1-like RNA-binding domain SE1039_RS01320 SM00977 TilS substrate C-terminal domain SE1039_RS01330 SM00382 ATPases associated with a variety of cellular activities SE1039_RS01350 SM00905 Dihydroneopterin aldolase SE1039_RS01445 SM00345 helix_turn_helix gluconate operon transcriptional repressor SE1039_RS01480 SM00382 ATPases associated with a variety of cellular activities SE1039_RS01480 SM01086 C-terminal, D2-small domain, of ClpB protein SE1039_RS01485 SM00382 ATPases associated with a variety of cellular activities SE1039_RS01490 SM00670 Large family of predicted nucleotide-binding domains SE1039_RS01505 SM00840 SE1039_RS01505 SE1039_RS01515 SM00967 RNA 2'-O ribose methyltransferase substrate binding SE1039_RS01535 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SE1039_RS01535 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SE1039_RS01540 SM00649 Ribosomal protein L11/L12 SE1039_RS01570 SM00663 RNA polymerase I subunit A N-terminus SE1039_RS01590 SM00838 Elongation factor G C-terminus SE1039_RS01590 SM00889 Elongation factor G, domain IV SE1039_RS01645 SM00882 Coenzyme A transferase SE1039_RS01650 SM00882 Coenzyme A transferase SE1039_RS01720 SM00354 helix_turn _helix lactose operon repressor SE1039_RS01765 SM00382 ATPases associated with a variety of cellular activities SE1039_RS01790 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SE1039_RS01835 SM00382 ATPases associated with a variety of cellular activities SE1039_RS01865 SM00344 helix_turn_helix ASNC type SE1039_RS01870 SM00849 Metallo-beta-lactamase superfamily SE1039_RS01910 SM00954 Region found in RelA / SpoT proteins SE1039_RS01955 SM00857 Resolvase, N terminal domain SE1039_RS01960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SE1039_RS02035 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SE1039_RS02070 SM01022 SE1039_RS02070 SE1039_RS02090 SM00986 Uracil DNA glycosylase superfamily SE1039_RS02090 SM00987 UreE urease accessory protein, C-terminal domain SE1039_RS02200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SE1039_RS02215 SM00836 DALR anticodon binding domain SE1039_RS02215 SM01016 Arginyl tRNA synthetase N terminal dom SE1039_RS02220 SM00478 endonuclease III SE1039_RS02225 SM00422 helix_turn_helix, mercury resistance SE1039_RS02265 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS02350 SM00382 ATPases associated with a variety of cellular activities SE1039_RS02355 SM00529 Helix-turn-helix diphteria tox regulatory element SE1039_RS02355 SM00899 SE1039_RS02355 SE1039_RS02370 SM00382 ATPases associated with a variety of cellular activities SE1039_RS02400 SM00382 ATPases associated with a variety of cellular activities SE1039_RS02415 SM00382 ATPases associated with a variety of cellular activities SE1039_RS02435 SM01120 SE1039_RS02435 SE1039_RS02470 SM00448 cheY-homologous receiver domain SE1039_RS02470 SM00862 Transcriptional regulatory protein, C terminal SE1039_RS02475 SM00387 Histidine kinase-like ATPases SE1039_RS02490 SM00257 Lysin motif SE1039_RS02595 SM00382 ATPases associated with a variety of cellular activities SE1039_RS02600 SM00382 ATPases associated with a variety of cellular activities SE1039_RS02605 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS02610 SM00833 Cobalamin synthesis protein cobW C-terminal domain SE1039_RS02665 SM00420 helix_turn_helix, Deoxyribose operon repressor SE1039_RS02665 SM01134 SE1039_RS02665 SE1039_RS02685 SM01091 Transporter associated domain SE1039_RS02745 SM00796 Allophanate hydrolase subunit 1 SE1039_RS02750 SM00797 Allophanate hydrolase subunit 2 SE1039_RS02765 SM00382 ATPases associated with a variety of cellular activities SE1039_RS02770 SM00341 Helicase and RNase D C-terminal SE1039_RS02770 SM00487 DEAD-like helicases superfamily SE1039_RS02770 SM00490 helicase superfamily c-terminal domain SE1039_RS02770 SM00956 SE1039_RS02770 SE1039_RS02775 SM00382 ATPases associated with a variety of cellular activities SE1039_RS02795 SM00046 Diacylglycerol kinase catalytic domain (presumed) SE1039_RS02845 SM00382 ATPases associated with a variety of cellular activities SE1039_RS02905 SM00267 diguanylate cyclase SE1039_RS02925 SM00487 DEAD-like helicases superfamily SE1039_RS02925 SM00490 helicase superfamily c-terminal domain SE1039_RS02940 SM00957 SecA DEAD-like domain SE1039_RS02940 SM00958 SecA preprotein cross-linking domain SE1039_RS02945 SM00937 SE1039_RS02945 SE1039_RS02965 SM00487 DEAD-like helicases superfamily SE1039_RS02965 SM00490 helicase superfamily c-terminal domain SE1039_RS02970 SM00382 ATPases associated with a variety of cellular activities SE1039_RS02990 SM00028 Tetratricopeptide repeats SE1039_RS03055 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SE1039_RS03075 SM01192 SE1039_RS03075 SE1039_RS03075 SM01193 SE1039_RS03075 SE1039_RS03095 SM00316 Ribosomal protein S1-like RNA-binding domain SE1039_RS03095 SM00357 Cold shock protein domain SE1039_RS03095 SM00955 SE1039_RS03095 SE1039_RS03200 SM00357 Cold shock protein domain SE1039_RS03345 SM00493 SE1039_RS03345 SE1039_RS03355 SM00382 ATPases associated with a variety of cellular activities SE1039_RS03355 SM00930 SE1039_RS03355 SE1039_RS03380 SM00382 ATPases associated with a variety of cellular activities SE1039_RS03430 SM00729 Elongator protein 3, MiaB family, Radical SAM SE1039_RS03575 SM01298 SE1039_RS03575 SE1039_RS03585 SM00316 Ribosomal protein S1-like RNA-binding domain SE1039_RS03600 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SE1039_RS03700 SM00382 ATPases associated with a variety of cellular activities SE1039_RS03700 SM01086 C-terminal, D2-small domain, of ClpB protein SE1039_RS03715 SM00825 Beta-ketoacyl synthase SE1039_RS03740 SM00382 ATPases associated with a variety of cellular activities SE1039_RS03745 SM00382 ATPases associated with a variety of cellular activities SE1039_RS03795 SM01118 SE1039_RS03795 SE1039_RS03805 SM00954 Region found in RelA / SpoT proteins SE1039_RS03820 SM00116 Domain in cystathionine beta-synthase and other proteins. SE1039_RS03820 SM00924 MgtE intracellular N domain SE1039_RS03885 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SE1039_RS03915 SM00914 SE1039_RS03915 SE1039_RS03935 SM00857 Resolvase, N terminal domain SE1039_RS03960 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SE1039_RS03975 SM00450 Rhodanese Homology Domain SE1039_RS03980 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SE1039_RS03990 SM00226 Low molecular weight phosphatase family SE1039_RS04035 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS04050 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS04055 SM00047 Lysozyme subfamily 2 SE1039_RS04055 SM00644 SE1039_RS04055 SE1039_RS04125 SM01001 AIR carboxylase SE1039_RS04145 SM01211 SE1039_RS04145 SE1039_RS04170 SM00798 AICARFT/IMPCHase bienzyme SE1039_RS04170 SM00851 MGS-like domain SE1039_RS04175 SM01209 SE1039_RS04175 SE1039_RS04175 SM01210 SE1039_RS04175 SE1039_RS04185 SM00382 ATPases associated with a variety of cellular activities SE1039_RS04240 SM00849 Metallo-beta-lactamase superfamily SE1039_RS04270 SM00861 Transketolase, pyrimidine binding domain SE1039_RS04290 SM00382 ATPases associated with a variety of cellular activities SE1039_RS04335 SM00838 Elongation factor G C-terminus SE1039_RS04355 SM00878 Biotin carboxylase C-terminal domain SE1039_RS04375 SM00382 ATPases associated with a variety of cellular activities SE1039_RS04435 SM00967 RNA 2'-O ribose methyltransferase substrate binding SE1039_RS04445 SM00873 B3/4 domain SE1039_RS04445 SM00874 tRNA synthetase B5 domain SE1039_RS04445 SM00896 Ferredoxin-fold anticodon binding domain SE1039_RS04465 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SE1039_RS04465 SM00481 DNA polymerase alpha chain like domain SE1039_RS04465 SM00483 DNA polymerase X family SE1039_RS04470 SM00463 Small MutS-related domain SE1039_RS04470 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SE1039_RS04470 SM00534 ATPase domain of DNA mismatch repair MUTS family SE1039_RS04480 SM00465 GIY-YIG type nucleases (URI domain) SE1039_RS04610 SM00740 SE1039_RS04610 SE1039_RS04630 SM00842 Cell division protein FtsA SE1039_RS04635 SM00864 Tubulin/FtsZ family, GTPase domain SE1039_RS04635 SM00865 Tubulin/FtsZ family, C-terminal domain SE1039_RS04660 SM00363 S4 RNA-binding domain SE1039_RS04690 SM00363 S4 RNA-binding domain SE1039_RS04715 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SE1039_RS04720 SM00851 MGS-like domain SE1039_RS04720 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SE1039_RS04720 SM01209 SE1039_RS04720 SE1039_RS04725 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SE1039_RS04755 SM00072 Guanylate kinase homologues. SE1039_RS04760 SM01409 SE1039_RS04760 SE1039_RS04770 SM00487 DEAD-like helicases superfamily SE1039_RS04770 SM00490 helicase superfamily c-terminal domain SE1039_RS04790 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS04860 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS05050 SM00287 Bacterial SH3 domain homologues SE1039_RS05050 SM00644 SE1039_RS05050 SE1039_RS05060 SM00014 Acid phosphatase homologues SE1039_RS05130 SM00331 Sigma factor PP2C-like phosphatases SE1039_RS05130 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SE1039_RS05135 SM00220 Serine/Threonine protein kinases, catalytic domain SE1039_RS05135 SM00740 SE1039_RS05135 SE1039_RS05155 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SE1039_RS05170 SM01120 SE1039_RS05170 SE1039_RS05170 SM01121 SE1039_RS05170 SE1039_RS05185 SM00487 DEAD-like helicases superfamily SE1039_RS05185 SM00490 helicase superfamily c-terminal domain SE1039_RS05205 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SE1039_RS05210 SM00822 SE1039_RS05210 SE1039_RS05220 SM00358 Double-stranded RNA binding motif SE1039_RS05220 SM00535 Ribonuclease III family SE1039_RS05225 SM00968 SMC proteins Flexible Hinge Domain SE1039_RS05230 SM00382 ATPases associated with a variety of cellular activities SE1039_RS05230 SM00962 SRP54-type protein, GTPase domain SE1039_RS05230 SM00963 SRP54-type protein, helical bundle domain SE1039_RS05240 SM00382 ATPases associated with a variety of cellular activities SE1039_RS05240 SM00962 SRP54-type protein, GTPase domain SE1039_RS05240 SM00963 SRP54-type protein, helical bundle domain SE1039_RS05300 SM00881 CoA binding domain SE1039_RS05310 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SE1039_RS05310 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SE1039_RS05310 SM00493 SE1039_RS05310 SE1039_RS05330 SM00382 ATPases associated with a variety of cellular activities SE1039_RS05330 SM01086 C-terminal, D2-small domain, of ClpB protein SE1039_RS05370 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SE1039_RS05380 SM00479 SE1039_RS05380 SE1039_RS05380 SM00481 DNA polymerase alpha chain like domain SE1039_RS05390 SM00316 Ribosomal protein S1-like RNA-binding domain SE1039_RS05390 SM00322 K homology RNA-binding domain SE1039_RS05430 SM00904 Riboflavin kinase SE1039_RS05435 SM01387 SE1039_RS05435 SE1039_RS05440 SM00316 Ribosomal protein S1-like RNA-binding domain SE1039_RS05440 SM00322 K homology RNA-binding domain SE1039_RS05445 SM00849 Metallo-beta-lactamase superfamily SE1039_RS05450 SM00382 ATPases associated with a variety of cellular activities SE1039_RS05450 SM00843 SE1039_RS05450 SE1039_RS05455 SM00866 SE1039_RS05455 SE1039_RS05480 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS05490 SM00852 Probable molybdopterin binding domain SE1039_RS05495 SM00382 ATPases associated with a variety of cellular activities SE1039_RS05500 SM00322 K homology RNA-binding domain SE1039_RS05500 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SE1039_RS05545 SM00729 Elongator protein 3, MiaB family, Radical SAM SE1039_RS05560 SM00342 helix_turn_helix, arabinose operon control protein SE1039_RS05575 SM01217 SE1039_RS05575 SE1039_RS05580 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SE1039_RS05580 SM00534 ATPase domain of DNA mismatch repair MUTS family SE1039_RS05585 SM00853 MutL C terminal dimerisation domain SE1039_RS05585 SM01340 SE1039_RS05585 SE1039_RS05660 SM00422 helix_turn_helix, mercury resistance SE1039_RS05665 SM01230 SE1039_RS05665 SE1039_RS05690 SM00318 Staphylococcal nuclease homologues SE1039_RS05745 SM01060 SE1039_RS05745 SE1039_RS05765 SM01240 SE1039_RS05765 SE1039_RS05790 SM00861 Transketolase, pyrimidine binding domain SE1039_RS05870 SM01207 SE1039_RS05870 SE1039_RS05875 SM00387 Histidine kinase-like ATPases SE1039_RS05875 SM00433 TopoisomeraseII SE1039_RS05880 SM00434 DNA Topoisomerase IV SE1039_RS05890 SM01061 CAT RNA binding domain SE1039_RS05920 SM00354 helix_turn _helix lactose operon repressor SE1039_RS05930 SM00382 ATPases associated with a variety of cellular activities SE1039_RS06095 SM00382 ATPases associated with a variety of cellular activities SE1039_RS06120 SM00382 ATPases associated with a variety of cellular activities SE1039_RS06135 SM00859 Semialdehyde dehydrogenase, NAD binding domain SE1039_RS06140 SM01130 SE1039_RS06140 SE1039_RS06160 SM01005 Alanine racemase, C-terminal domain SE1039_RS06170 SM00357 Cold shock protein domain SE1039_RS06205 SM00327 von Willebrand factor (vWF) type A domain SE1039_RS06210 SM00382 ATPases associated with a variety of cellular activities SE1039_RS06235 SM00382 ATPases associated with a variety of cellular activities SE1039_RS06265 SM00342 helix_turn_helix, arabinose operon control protein SE1039_RS06270 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS06285 SM00861 Transketolase, pyrimidine binding domain SE1039_RS06290 SM00387 Histidine kinase-like ATPases SE1039_RS06290 SM00388 His Kinase A (phosphoacceptor) domain SE1039_RS06295 SM00448 cheY-homologous receiver domain SE1039_RS06295 SM00862 Transcriptional regulatory protein, C terminal SE1039_RS06300 SM00014 Acid phosphatase homologues SE1039_RS06315 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SE1039_RS06315 SM00245 tail specific protease SE1039_RS06360 SM00567 E-Z type HEAT repeats SE1039_RS06360 SM00932 Scaffold protein Nfu/NifU N terminal SE1039_RS06365 SM00932 Scaffold protein Nfu/NifU N terminal SE1039_RS06390 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SE1039_RS06390 SM00475 5'-3' exonuclease SE1039_RS06410 SM00981 SE1039_RS06410 SE1039_RS06445 SM00478 endonuclease III SE1039_RS06445 SM00525 SE1039_RS06445 SE1039_RS06460 SM00479 SE1039_RS06460 SE1039_RS06460 SM00491 SE1039_RS06460 SE1039_RS06495 SM00914 SE1039_RS06495 SE1039_RS06500 SM00028 Tetratricopeptide repeats SE1039_RS06520 SM00562 SE1039_RS06520 SE1039_RS06540 SM00411 bacterial (prokaryotic) histone like domain SE1039_RS06555 SM00316 Ribosomal protein S1-like RNA-binding domain SE1039_RS06565 SM00870 SE1039_RS06565 SE1039_RS06575 SM00257 Lysin motif SE1039_RS06580 SM00487 DEAD-like helicases superfamily SE1039_RS06580 SM00490 helicase superfamily c-terminal domain SE1039_RS06600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SE1039_RS06600 SM00387 Histidine kinase-like ATPases SE1039_RS06600 SM00388 His Kinase A (phosphoacceptor) domain SE1039_RS06605 SM00448 cheY-homologous receiver domain SE1039_RS06605 SM00862 Transcriptional regulatory protein, C terminal SE1039_RS06610 SM00363 S4 RNA-binding domain SE1039_RS06670 SM00342 helix_turn_helix, arabinose operon control protein SE1039_RS06670 SM00871 Bacterial transcription activator, effector binding domain SE1039_RS06675 SM00642 Alpha-amylase domain SE1039_RS06680 SM00354 helix_turn _helix lactose operon repressor SE1039_RS06685 SM01350 SE1039_RS06685 SE1039_RS06710 SM00861 Transketolase, pyrimidine binding domain SE1039_RS06770 SM00878 Biotin carboxylase C-terminal domain SE1039_RS06780 SM00841 Elongation factor P, C-terminal SE1039_RS06780 SM01185 SE1039_RS06780 SE1039_RS06805 SM00450 Rhodanese Homology Domain SE1039_RS06865 SM00849 Metallo-beta-lactamase superfamily SE1039_RS06920 SM00382 ATPases associated with a variety of cellular activities SE1039_RS06925 SM00518 AP endonuclease family 2 SE1039_RS06930 SM00487 DEAD-like helicases superfamily SE1039_RS06930 SM00490 helicase superfamily c-terminal domain SE1039_RS06950 SM00400 zinc finger SE1039_RS06950 SM00493 SE1039_RS06950 SE1039_RS06960 SM00116 Domain in cystathionine beta-synthase and other proteins. SE1039_RS07030 SM00271 DnaJ molecular chaperone homology domain SE1039_RS07050 SM00729 Elongator protein 3, MiaB family, Radical SAM SE1039_RS07055 SM00838 Elongation factor G C-terminus SE1039_RS07070 SM00849 Metallo-beta-lactamase superfamily SE1039_RS07080 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SE1039_RS07095 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SE1039_RS07105 SM01103 SE1039_RS07105 SE1039_RS07140 SM00878 Biotin carboxylase C-terminal domain SE1039_RS07150 SM00797 Allophanate hydrolase subunit 2 SE1039_RS07155 SM00796 Allophanate hydrolase subunit 1 SE1039_RS07190 SM00732 Likely ribonuclease with RNase H fold. SE1039_RS07200 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SE1039_RS07205 SM00382 ATPases associated with a variety of cellular activities SE1039_RS07210 SM00028 Tetratricopeptide repeats SE1039_RS07225 SM00382 ATPases associated with a variety of cellular activities SE1039_RS07250 SM00382 ATPases associated with a variety of cellular activities SE1039_RS07270 SM00287 Bacterial SH3 domain homologues SE1039_RS07270 SM00646 SE1039_RS07270 SE1039_RS07280 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SE1039_RS07280 SM00954 Region found in RelA / SpoT proteins SE1039_RS07300 SM01323 SE1039_RS07300 SE1039_RS07315 SM00382 ATPases associated with a variety of cellular activities SE1039_RS07320 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SE1039_RS07420 SM01004 Delta-aminolevulinic acid dehydratase SE1039_RS07450 SM00382 ATPases associated with a variety of cellular activities SE1039_RS07450 SM00994 ClpX C4-type zinc finger SE1039_RS07450 SM01086 C-terminal, D2-small domain, of ClpB protein SE1039_RS07490 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SE1039_RS07510 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SE1039_RS07520 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SE1039_RS07520 SM01232 SE1039_RS07520 SE1039_RS07525 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SE1039_RS07525 SM00474 3'-5' exonuclease SE1039_RS07525 SM00475 5'-3' exonuclease SE1039_RS07525 SM00482 DNA polymerase A domain SE1039_RS07530 SM00387 Histidine kinase-like ATPases SE1039_RS07530 SM00388 His Kinase A (phosphoacceptor) domain SE1039_RS07535 SM00448 cheY-homologous receiver domain SE1039_RS07535 SM00862 Transcriptional regulatory protein, C terminal SE1039_RS07540 SM01329 SE1039_RS07540 SE1039_RS07575 SM00919 Malic enzyme, NAD binding domain SE1039_RS07575 SM01274 SE1039_RS07575 SE1039_RS07580 SM00481 DNA polymerase alpha chain like domain SE1039_RS07590 SM00116 Domain in cystathionine beta-synthase and other proteins. SE1039_RS07600 SM00849 Metallo-beta-lactamase superfamily SE1039_RS07615 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SE1039_RS07615 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SE1039_RS07660 SM00981 SE1039_RS07660 SE1039_RS07675 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SE1039_RS07680 SM00363 S4 RNA-binding domain SE1039_RS07680 SM01390 SE1039_RS07680 SE1039_RS07720 SM00563 Phosphate acyltransferases SE1039_RS07725 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SE1039_RS07730 SM00363 S4 RNA-binding domain SE1039_RS07760 SM00354 helix_turn _helix lactose operon repressor SE1039_RS07765 SM00830 Chorismate mutase type II SE1039_RS07785 SM00843 SE1039_RS07785 SE1039_RS07815 SM00849 Metallo-beta-lactamase superfamily SE1039_RS07845 SM00363 S4 RNA-binding domain SE1039_RS07860 SM00450 Rhodanese Homology Domain SE1039_RS07875 SM00729 Elongator protein 3, MiaB family, Radical SAM SE1039_RS07935 SM00047 Lysozyme subfamily 2 SE1039_RS08015 SM01234 SE1039_RS08015 SE1039_RS08120 SM00382 ATPases associated with a variety of cellular activities SE1039_RS08170 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS08195 SM00421 helix_turn_helix, Lux Regulon SE1039_RS08195 SM00448 cheY-homologous receiver domain SE1039_RS08235 SM00567 E-Z type HEAT repeats SE1039_RS08240 SM00382 ATPases associated with a variety of cellular activities SE1039_RS08245 SM00062 Bacterial periplasmic substrate-binding proteins SE1039_RS08245 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SE1039_RS08425 SM00382 ATPases associated with a variety of cellular activities SE1039_RS08435 SM00478 endonuclease III SE1039_RS08435 SM00525 SE1039_RS08435 SE1039_RS08450 SM00382 ATPases associated with a variety of cellular activities SE1039_RS08490 SM00226 Low molecular weight phosphatase family SE1039_RS08505 SM00421 helix_turn_helix, Lux Regulon SE1039_RS08505 SM00448 cheY-homologous receiver domain SE1039_RS08510 SM00387 Histidine kinase-like ATPases SE1039_RS08550 SM00479 SE1039_RS08550 SE1039_RS08570 SM00046 Diacylglycerol kinase catalytic domain (presumed) SE1039_RS08575 SM00845 GatB domain SE1039_RS08595 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SE1039_RS08595 SM00292 breast cancer carboxy-terminal domain SE1039_RS08595 SM00532 Ligase N family SE1039_RS08620 SM00998 Adenylosuccinate lyase C-terminus SE1039_RS08670 SM01131 SE1039_RS08670 SE1039_RS08720 SM00382 ATPases associated with a variety of cellular activities SE1039_RS08730 SM00382 ATPases associated with a variety of cellular activities SE1039_RS08735 SM00345 helix_turn_helix gluconate operon transcriptional repressor SE1039_RS08765 SM00883 Chaperonin 10 Kd subunit SE1039_RS08790 SM00793 Accessory gene regulator B SE1039_RS08795 SM00794 Staphylococcal AgrD protein SE1039_RS08805 SM00448 cheY-homologous receiver domain SE1039_RS08805 SM00850 LytTr DNA-binding domain SE1039_RS08815 SM00640 Glycosyl hydrolases family 32 SE1039_RS08820 SM00354 helix_turn _helix lactose operon repressor SE1039_RS08835 SM00881 CoA binding domain SE1039_RS08840 SM00382 ATPases associated with a variety of cellular activities SE1039_RS08845 SM00534 ATPase domain of DNA mismatch repair MUTS family SE1039_RS08895 SM00917 LeuA allosteric (dimerisation) domain SE1039_RS08900 SM01329 SE1039_RS08900 SE1039_RS08945 SM00731 SprT homologues. SE1039_RS08950 SM00316 Ribosomal protein S1-like RNA-binding domain SE1039_RS08950 SM00732 Likely ribonuclease with RNase H fold. SE1039_RS08970 SM00331 Sigma factor PP2C-like phosphatases SE1039_RS08970 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SE1039_RS08985 SM01005 Alanine racemase, C-terminal domain SE1039_RS09010 SM00487 DEAD-like helicases superfamily SE1039_RS09010 SM00490 helicase superfamily c-terminal domain SE1039_RS09040 SM00155 Phospholipase D. Active site motifs. SE1039_RS09045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SE1039_RS09110 SM00382 ATPases associated with a variety of cellular activities SE1039_RS09170 SM00226 Low molecular weight phosphatase family SE1039_RS09185 SM00937 SE1039_RS09185 SE1039_RS09200 SM00357 Cold shock protein domain SE1039_RS09200 SM00382 ATPases associated with a variety of cellular activities SE1039_RS09200 SM00959 Rho termination factor, N-terminal domain SE1039_RS09280 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SE1039_RS09285 SM01133 SE1039_RS09285 SE1039_RS09330 SM00345 helix_turn_helix gluconate operon transcriptional repressor SE1039_RS09330 SM00895 SE1039_RS09330 SE1039_RS09340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SE1039_RS09365 SM00382 ATPases associated with a variety of cellular activities SE1039_RS09565 SM00829 Enoylreductase SE1039_RS09570 SM00829 Enoylreductase SE1039_RS09605 SM00382 ATPases associated with a variety of cellular activities SE1039_RS09610 SM00382 ATPases associated with a variety of cellular activities SE1039_RS09620 SM00662 RNA polymerases D SE1039_RS09640 SM00316 Ribosomal protein S1-like RNA-binding domain SE1039_RS09695 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SE1039_RS09700 SM01374 SE1039_RS09700 SE1039_RS09720 SM00322 K homology RNA-binding domain SE1039_RS09735 SM01382 SE1039_RS09735 SE1039_RS09735 SM01383 SE1039_RS09735 SE1039_RS09755 SM01403 SE1039_RS09755 SE1039_RS09770 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SE1039_RS09770 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SE1039_RS09770 SM00493 SE1039_RS09770 SE1039_RS09820 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS09835 SM00729 Elongator protein 3, MiaB family, Radical SAM SE1039_RS09860 SM00852 Probable molybdopterin binding domain SE1039_RS09870 SM00852 Probable molybdopterin binding domain SE1039_RS09885 SM00382 ATPases associated with a variety of cellular activities SE1039_RS09915 SM00354 helix_turn _helix lactose operon repressor SE1039_RS09945 SM00382 ATPases associated with a variety of cellular activities SE1039_RS09950 SM00062 Bacterial periplasmic substrate-binding proteins SE1039_RS10035 SM00047 Lysozyme subfamily 2 SE1039_RS10050 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SE1039_RS10050 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SE1039_RS10065 SM00420 helix_turn_helix, Deoxyribose operon repressor SE1039_RS10095 SM00098 Alkaline phosphatase homologues SE1039_RS10160 SM00903 Flavin reductase like domain SE1039_RS10230 SM00382 ATPases associated with a variety of cellular activities SE1039_RS10310 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS10320 SM00382 ATPases associated with a variety of cellular activities SE1039_RS10330 SM00448 cheY-homologous receiver domain SE1039_RS10330 SM00862 Transcriptional regulatory protein, C terminal SE1039_RS10335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SE1039_RS10335 SM00387 Histidine kinase-like ATPases SE1039_RS10335 SM00388 His Kinase A (phosphoacceptor) domain SE1039_RS10370 SM00829 Enoylreductase SE1039_RS10410 SM01120 SE1039_RS10410 SE1039_RS10420 SM00829 Enoylreductase SE1039_RS10425 SM00420 helix_turn_helix, Deoxyribose operon repressor SE1039_RS10425 SM01134 SE1039_RS10425 SE1039_RS10470 SM00644 SE1039_RS10470 SE1039_RS10475 SM00342 helix_turn_helix, arabinose operon control protein SE1039_RS10490 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS10505 SM00421 helix_turn_helix, Lux Regulon SE1039_RS10505 SM00448 cheY-homologous receiver domain SE1039_RS10510 SM00387 Histidine kinase-like ATPases SE1039_RS10535 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SE1039_RS10600 SM00867 YceI-like domain SE1039_RS10620 SM01022 SE1039_RS10620 SE1039_RS10630 SM00382 ATPases associated with a variety of cellular activities SE1039_RS10640 SM00855 Phosphoglycerate mutase family SE1039_RS10665 SM00871 Bacterial transcription activator, effector binding domain SE1039_RS10715 SM00382 ATPases associated with a variety of cellular activities SE1039_RS10755 SM00116 Domain in cystathionine beta-synthase and other proteins. SE1039_RS10755 SM00382 ATPases associated with a variety of cellular activities SE1039_RS10800 SM00382 ATPases associated with a variety of cellular activities SE1039_RS10945 SM00342 helix_turn_helix, arabinose operon control protein SE1039_RS10965 SM00345 helix_turn_helix gluconate operon transcriptional repressor SE1039_RS10965 SM00895 SE1039_RS10965 SE1039_RS10970 SM00954 Region found in RelA / SpoT proteins SE1039_RS11040 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS11060 SM00382 ATPases associated with a variety of cellular activities SE1039_RS11065 SM00382 ATPases associated with a variety of cellular activities SE1039_RS11095 SM01130 SE1039_RS11095 SE1039_RS11130 SM00342 helix_turn_helix, arabinose operon control protein SE1039_RS11160 SM00854 Bacterial capsule synthesis protein PGA_cap SE1039_RS11315 SM00342 helix_turn_helix, arabinose operon control protein SE1039_RS11360 SM01266 SE1039_RS11360 SE1039_RS11395 SM00382 ATPases associated with a variety of cellular activities SE1039_RS11400 SM00822 SE1039_RS11400 SE1039_RS11410 SM00382 ATPases associated with a variety of cellular activities SE1039_RS11460 SM00478 endonuclease III SE1039_RS11520 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS11530 SM00382 ATPases associated with a variety of cellular activities SE1039_RS11535 SM00382 ATPases associated with a variety of cellular activities SE1039_RS11575 SM00988 UreE urease accessory protein, N-terminal domain SE1039_RS11710 SM00346 helix_turn_helix isocitrate lyase regulation SE1039_RS11850 SM00859 Semialdehyde dehydrogenase, NAD binding domain SE1039_RS11865 SM00382 ATPases associated with a variety of cellular activities SE1039_RS11895 SM00854 Bacterial capsule synthesis protein PGA_cap SE1039_RS11990 SM00345 helix_turn_helix gluconate operon transcriptional repressor SE1039_RS11995 SM00155 Phospholipase D. Active site motifs. SE1039_RS12005 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS12010 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS12065 SM01001 AIR carboxylase SE1039_RS12105 SM00506 Appr-1"-p processing enzyme SE1039_RS12135 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS12225 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS12245 SM00382 ATPases associated with a variety of cellular activities SE1039_RS12320 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS12330 SM00382 ATPases associated with a variety of cellular activities SE1039_RS12365 SM00345 helix_turn_helix gluconate operon transcriptional repressor SE1039_RS12365 SM00866 SE1039_RS12365 SE1039_RS12410 SM00354 helix_turn _helix lactose operon repressor SE1039_RS12420 SM00382 ATPases associated with a variety of cellular activities SE1039_RS12425 SM00450 Rhodanese Homology Domain SE1039_RS12425 SM00849 Metallo-beta-lactamase superfamily SE1039_RS12430 SM00450 Rhodanese Homology Domain SE1039_RS12465 SM01007 Class II Aldolase and Adducin N-terminal domain SE1039_RS12475 SM00345 helix_turn_helix gluconate operon transcriptional repressor SE1039_RS12480 SM00354 helix_turn _helix lactose operon repressor SE1039_RS12510 SM00450 Rhodanese Homology Domain SE1039_RS12575 SM00829 Enoylreductase SE1039_RS12580 SM00829 Enoylreductase SE1039_RS12645 SM00487 DEAD-like helicases superfamily SE1039_RS12645 SM00490 helicase superfamily c-terminal domain SE1039_RS12655 SM00470 ParB-like nuclease domain SE1039_RS12745 SM01038 Beta galactosidase small chain SE1039_RS12760 SM00342 helix_turn_helix, arabinose operon control protein SE1039_RS12770 SM00530 Helix-turn-helix XRE-family like proteins SE1039_RS12780 SM00382 ATPases associated with a variety of cellular activities SE1039_RS12810 SM00382 ATPases associated with a variety of cellular activities SE1039_RS12845 SM00422 helix_turn_helix, mercury resistance SE1039_RS12850 SM00829 Enoylreductase SE1039_RS12860 SM00729 Elongator protein 3, MiaB family, Radical SAM SE1039_RS12860 SM00876 Biotin and Thiamin Synthesis associated domain SE1039_RS12865 SM01209 SE1039_RS12865 SE1039_RS12915 SM00833 Cobalamin synthesis protein cobW C-terminal domain SE1039_RS12920 SM00919 Malic enzyme, NAD binding domain SE1039_RS12920 SM01274 SE1039_RS12920 SE1039_RS12930 SM00448 cheY-homologous receiver domain SE1039_RS12935 SM00387 Histidine kinase-like ATPases SE1039_RS12955 SM01061 CAT RNA binding domain SE1039_RS12960 SM00829 Enoylreductase SE1039_RS13060 SM00829 Enoylreductase SE1039_RS13075 SM00422 helix_turn_helix, mercury resistance SE1039_RS13090 SM00382 ATPases associated with a variety of cellular activities SE1039_RS13170 SM00487 DEAD-like helicases superfamily SE1039_RS13205 SM00857 Resolvase, N terminal domain SE1039_RS13325 SM00857 Resolvase, N terminal domain SE1039_RS13330 SM00857 Resolvase, N terminal domain SE1039_RS13380 SM00849 Metallo-beta-lactamase superfamily SE1039_RS13395 SM00091 PAS domain SE1039_RS13395 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SE1039_RS13395 SM00387 Histidine kinase-like ATPases SE1039_RS13395 SM00388 His Kinase A (phosphoacceptor) domain SE1039_RS13400 SM00448 cheY-homologous receiver domain SE1039_RS13400 SM00862 Transcriptional regulatory protein, C terminal SE1039_RS13410 SM00347 helix_turn_helix multiple antibiotic resistance protein SE1039_RS13430 SM00788 Adenylosuccinate synthetase SE1039_RS13445 SM00267 diguanylate cyclase SE1039_RS13485 SM00434 DNA Topoisomerase IV SE1039_RS13490 SM00387 Histidine kinase-like ATPases SE1039_RS13490 SM00433 TopoisomeraseII SE1039_RS13505 SM00480 DNA polymerase III beta subunit SE1039_RS13510 SM00382 ATPases associated with a variety of cellular activities SE1039_RS13510 SM00760 Bacterial dnaA protein helix-turn-helix domain