locus-tag class description CYD28_RS00005 IPR013317 Chromosomal replication initiator protein DnaA CYD28_RS00005 IPR010921 Trp repressor/replication initiator CYD28_RS00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00005 IPR038454 DnaA, N-terminal domain superfamily CYD28_RS00005 IPR024633 DnaA N-terminal domain CYD28_RS00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal CYD28_RS00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CYD28_RS00005 IPR001957 Chromosomal replication control, initiator DnaA CYD28_RS00005 IPR003593 AAA+ ATPase domain CYD28_RS00005 IPR020591 Chromosomal replication control, initiator DnaA-like CYD28_RS00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal CYD28_RS00010 IPR022637 DNA polymerase III, beta sliding clamp, central CYD28_RS00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal CYD28_RS00010 IPR001001 DNA polymerase III, beta sliding clamp CYD28_RS00015 IPR014330 RNA-binding S4-related,YaaA CYD28_RS00015 IPR002942 RNA-binding S4 domain CYD28_RS00015 IPR036986 RNA-binding S4 domain superfamily CYD28_RS00020 IPR042174 DNA-binding RecF, domain 2 CYD28_RS00020 IPR003395 RecF/RecN/SMC, N-terminal CYD28_RS00020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00020 IPR018078 DNA-binding, RecF, conserved site CYD28_RS00020 IPR001238 DNA-binding, RecF CYD28_RS00025 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS00025 IPR011557 DNA gyrase, subunit B CYD28_RS00025 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS00025 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS00025 IPR002288 DNA gyrase B subunit, C-terminal CYD28_RS00025 IPR001241 DNA topoisomerase, type IIA CYD28_RS00025 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CYD28_RS00025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS00025 IPR034160 DNA gyrase subunit B, TOPRIM domain CYD28_RS00025 IPR006171 TOPRIM domain CYD28_RS00025 IPR018522 DNA topoisomerase, type IIA, conserved site CYD28_RS00025 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CYD28_RS00025 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CYD28_RS00030 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CYD28_RS00030 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CYD28_RS00030 IPR005743 DNA gyrase, subunit A CYD28_RS00030 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CYD28_RS00030 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CYD28_RS00030 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CYD28_RS00030 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CYD28_RS00035 IPR029056 Ribokinase-like CYD28_RS00035 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase CYD28_RS00035 IPR017953 Carbohydrate kinase, predicted, conserved site CYD28_RS00040 IPR033729 Serine-tRNA ligase catalytic core domain CYD28_RS00040 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CYD28_RS00040 IPR006195 Aminoacyl-tRNA synthetase, class II CYD28_RS00040 IPR002317 Serine-tRNA ligase, type1 CYD28_RS00040 IPR015866 Serine-tRNA synthetase, type1, N-terminal CYD28_RS00040 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily CYD28_RS00040 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CYD28_RS00045 IPR004471 Branched-chain amino acid transport, AzlC CYD28_RS00045 IPR011606 Branched-chain amino acid transport, permease CYD28_RS00055 IPR000073 Alpha/beta hydrolase fold-1 CYD28_RS00055 IPR029058 Alpha/Beta hydrolase fold CYD28_RS00055 IPR008220 Homoserine/serine acetyltransferase MetX-like CYD28_RS00065 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA CYD28_RS00065 IPR000160 GGDEF domain CYD28_RS00065 IPR001667 DDH domain CYD28_RS00065 IPR003156 DHHA1 domain CYD28_RS00065 IPR038763 DHH phosphoesterase superfamily CYD28_RS00070 IPR020594 Ribosomal protein L9, bacteria/chloroplast CYD28_RS00070 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CYD28_RS00070 IPR036791 Ribosomal protein L9, C-terminal domain superfamily CYD28_RS00070 IPR020070 Ribosomal protein L9, N-terminal CYD28_RS00070 IPR036935 Ribosomal protein L9, N-terminal domain superfamily CYD28_RS00070 IPR000244 Ribosomal protein L9 CYD28_RS00070 IPR020069 Ribosomal protein L9, C-terminal CYD28_RS00075 IPR007693 DNA helicase, DnaB-like, N-terminal CYD28_RS00075 IPR007694 DNA helicase, DnaB-like, C-terminal CYD28_RS00075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00075 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CYD28_RS00075 IPR007692 DNA helicase, DnaB type CYD28_RS00075 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CYD28_RS00075 IPR003593 AAA+ ATPase domain CYD28_RS00080 IPR018220 Adenylosuccinate synthase, GTP-binding site CYD28_RS00080 IPR042110 Adenylosuccinate synthetase, domain 2 CYD28_RS00080 IPR033128 Adenylosuccinate synthase, active site CYD28_RS00080 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00080 IPR001114 Adenylosuccinate synthetase CYD28_RS00080 IPR042111 Adenylosuccinate synthetase, domain 3 CYD28_RS00080 IPR042109 Adenylosuccinate synthetase, domain 1 CYD28_RS00095 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS00095 IPR039420 Transcriptional regulatory protein WalR-like CYD28_RS00095 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00095 IPR001867 OmpR/PhoB-type DNA-binding domain CYD28_RS00095 IPR011006 CheY-like superfamily CYD28_RS00095 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS00100 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CYD28_RS00100 IPR000700 PAS-associated, C-terminal CYD28_RS00100 IPR029151 Periplasmic sensor-like domain superfamily CYD28_RS00100 IPR013767 PAS fold CYD28_RS00100 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS00100 IPR003660 HAMP domain CYD28_RS00100 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS00100 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CYD28_RS00100 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CYD28_RS00100 IPR000014 PAS domain CYD28_RS00100 IPR005467 Histidine kinase domain CYD28_RS00100 IPR035965 PAS domain superfamily CYD28_RS00105 IPR009996 Regulatory protein YycH CYD28_RS00105 IPR042274 Regulatory protein YycH/YycI , domain 2 CYD28_RS00115 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CYD28_RS00115 IPR001279 Metallo-beta-lactamase CYD28_RS00120 IPR029028 Alpha/beta knot methyltransferases CYD28_RS00120 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYD28_RS00120 IPR003742 RNA methyltransferase RlmH CYD28_RS00125 IPR041405 Type III R-M EcoP15I, C-terminal CYD28_RS00125 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class CYD28_RS00125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS00125 IPR002941 DNA methylase N-4/N-6 CYD28_RS00125 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CYD28_RS00130 IPR014883 VRR-NUC domain CYD28_RS00130 IPR006935 Helicase/UvrB, N-terminal CYD28_RS00130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00170 IPR008276 Concentrative nucleoside transporter CYD28_RS00170 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CYD28_RS00170 IPR002668 Concentrative nucleoside transporter N-terminal domain CYD28_RS00170 IPR011657 Concentrative nucleoside transporter C-terminal domain CYD28_RS00175 IPR022830 Indigoidine synthase A-like CYD28_RS00175 IPR007342 Pseudouridine-5'-phosphate glycosidase CYD28_RS00210 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS00210 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00210 IPR001845 HTH ArsR-type DNA-binding domain CYD28_RS00210 IPR011991 ArsR-like helix-turn-helix domain CYD28_RS00220 IPR023214 HAD superfamily CYD28_RS00220 IPR018303 P-type ATPase, phosphorylation site CYD28_RS00220 IPR036412 HAD-like superfamily CYD28_RS00220 IPR023299 P-type ATPase, cytoplasmic domain N CYD28_RS00220 IPR027256 P-type ATPase, subfamily IB CYD28_RS00220 IPR008250 P-type ATPase, A domain superfamily CYD28_RS00220 IPR001757 P-type ATPase CYD28_RS00220 IPR023298 P-type ATPase, transmembrane domain superfamily CYD28_RS00225 IPR017782 Hydroxyacylglutathione hydrolase CYD28_RS00225 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain CYD28_RS00225 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain CYD28_RS00225 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CYD28_RS00225 IPR001279 Metallo-beta-lactamase CYD28_RS00230 IPR027396 DsrEFH-like CYD28_RS00230 IPR032836 DsrE2-like family CYD28_RS00235 IPR003735 Metal-sensitive transcriptional repressor CYD28_RS00235 IPR038390 Metal-sensitive transcriptional repressor superfamily CYD28_RS00240 IPR002781 Transmembrane protein TauE-like CYD28_RS00250 IPR011438 Domain of unknown function DUF1541 CYD28_RS00255 IPR005502 ADP-ribosylation/Crystallin J1 CYD28_RS00255 IPR036705 ADP-ribosylation/Crystallin J1 superfamily CYD28_RS00265 IPR022463 Fructose 1-phosphate kinase CYD28_RS00265 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CYD28_RS00265 IPR017583 Tagatose/fructose phosphokinase CYD28_RS00265 IPR029056 Ribokinase-like CYD28_RS00265 IPR011611 Carbohydrate kinase PfkB CYD28_RS00270 IPR032874 DDE domain CYD28_RS00270 IPR001584 Integrase, catalytic core CYD28_RS00270 IPR012337 Ribonuclease H-like superfamily CYD28_RS00270 IPR036397 Ribonuclease H superfamily CYD28_RS00310 IPR001845 HTH ArsR-type DNA-binding domain CYD28_RS00310 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00310 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS00310 IPR011991 ArsR-like helix-turn-helix domain CYD28_RS00310 IPR018334 ArsR-type transcription regulator, HTH motif CYD28_RS00315 IPR014064 Arsenate reductase ArsC CYD28_RS00315 IPR023485 Phosphotyrosine protein phosphatase I CYD28_RS00315 IPR036196 Phosphotyrosine protein phosphatase I superfamily CYD28_RS00320 IPR000802 Arsenical pump membrane protein, ArsB CYD28_RS00325 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00325 IPR001845 HTH ArsR-type DNA-binding domain CYD28_RS00325 IPR018334 ArsR-type transcription regulator, HTH motif CYD28_RS00325 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS00325 IPR011991 ArsR-like helix-turn-helix domain CYD28_RS00330 IPR032874 DDE domain CYD28_RS00330 IPR001584 Integrase, catalytic core CYD28_RS00330 IPR012337 Ribonuclease H-like superfamily CYD28_RS00330 IPR036397 Ribonuclease H superfamily CYD28_RS00335 IPR001460 Penicillin-binding protein, transpeptidase CYD28_RS00335 IPR005311 Penicillin-binding protein, dimerisation domain CYD28_RS00335 IPR036138 Penicillin-binding protein, dimerisation domain superfamily CYD28_RS00335 IPR007887 NTF2-like N-terminal transpeptidase CYD28_RS00335 IPR012338 Beta-lactamase/transpeptidase-like CYD28_RS00335 IPR032710 NTF2-like domain superfamily CYD28_RS00340 IPR029069 HotDog domain superfamily CYD28_RS00340 IPR002539 MaoC-like dehydratase domain CYD28_RS00345 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CYD28_RS00345 IPR030395 Glycerophosphodiester phosphodiesterase domain CYD28_RS00355 IPR016039 Thiolase-like CYD28_RS00355 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal CYD28_RS00355 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain CYD28_RS00355 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic CYD28_RS00360 IPR036397 Ribonuclease H superfamily CYD28_RS00360 IPR012337 Ribonuclease H-like superfamily CYD28_RS00360 IPR001584 Integrase, catalytic core CYD28_RS00360 IPR032874 DDE domain CYD28_RS00365 IPR023299 P-type ATPase, cytoplasmic domain N CYD28_RS00365 IPR001757 P-type ATPase CYD28_RS00365 IPR023298 P-type ATPase, transmembrane domain superfamily CYD28_RS00365 IPR027256 P-type ATPase, subfamily IB CYD28_RS00365 IPR023214 HAD superfamily CYD28_RS00365 IPR036412 HAD-like superfamily CYD28_RS00365 IPR018303 P-type ATPase, phosphorylation site CYD28_RS00365 IPR008250 P-type ATPase, A domain superfamily CYD28_RS00370 IPR011438 Domain of unknown function DUF1541 CYD28_RS00395 IPR000551 MerR-type HTH domain CYD28_RS00395 IPR011788 Zn(II)-responsive transcriptional regulator CYD28_RS00395 IPR009061 Putative DNA-binding domain superfamily CYD28_RS00405 IPR036291 NAD(P)-binding domain superfamily CYD28_RS00405 IPR016040 NAD(P)-binding domain CYD28_RS00410 IPR011032 GroES-like superfamily CYD28_RS00410 IPR020843 Polyketide synthase, enoylreductase domain CYD28_RS00410 IPR013149 Alcohol dehydrogenase, C-terminal CYD28_RS00410 IPR041694 Oxidoreductase, N-terminal domain CYD28_RS00410 IPR036291 NAD(P)-binding domain superfamily CYD28_RS00425 IPR011991 ArsR-like helix-turn-helix domain CYD28_RS00425 IPR018334 ArsR-type transcription regulator, HTH motif CYD28_RS00425 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS00425 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00425 IPR001845 HTH ArsR-type DNA-binding domain CYD28_RS00430 IPR014064 Arsenate reductase ArsC CYD28_RS00430 IPR023485 Phosphotyrosine protein phosphatase I CYD28_RS00430 IPR036196 Phosphotyrosine protein phosphatase I superfamily CYD28_RS00435 IPR000802 Arsenical pump membrane protein, ArsB CYD28_RS00440 IPR011991 ArsR-like helix-turn-helix domain CYD28_RS00440 IPR018334 ArsR-type transcription regulator, HTH motif CYD28_RS00440 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS00440 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00440 IPR001845 HTH ArsR-type DNA-binding domain CYD28_RS00450 IPR010920 LSM domain superfamily CYD28_RS00450 IPR011066 Mechanosensitive ion channel MscS, C-terminal CYD28_RS00450 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CYD28_RS00450 IPR023408 Mechanosensitive ion channel MscS domain superfamily CYD28_RS00450 IPR006685 Mechanosensitive ion channel MscS CYD28_RS00465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00465 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CYD28_RS00465 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CYD28_RS00470 IPR006128 Adhesion lipoprotein CYD28_RS00470 IPR006129 Adhesin B CYD28_RS00470 IPR006127 Periplasmic solute binding protein, ZnuA-like CYD28_RS00480 IPR023048 NADH-azoreductase, FMN-dependent CYD28_RS00480 IPR003680 Flavodoxin-like fold CYD28_RS00480 IPR029039 Flavoprotein-like superfamily CYD28_RS00490 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CYD28_RS00490 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS00490 IPR002933 Peptidase M20 CYD28_RS00490 IPR011650 Peptidase M20, dimerisation domain CYD28_RS00490 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase CYD28_RS00500 IPR012675 Beta-grasp domain superfamily CYD28_RS00500 IPR004095 TGS CYD28_RS00500 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CYD28_RS00500 IPR012676 TGS-like CYD28_RS00500 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CYD28_RS00500 IPR002320 Threonine-tRNA ligase, class IIa CYD28_RS00500 IPR036621 Anticodon-binding domain superfamily CYD28_RS00500 IPR004154 Anticodon-binding CYD28_RS00500 IPR006195 Aminoacyl-tRNA synthetase, class II CYD28_RS00500 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CYD28_RS00500 IPR033728 Threonine-tRNA ligase catalytic core domain CYD28_RS00505 IPR003439 ABC transporter-like CYD28_RS00505 IPR003593 AAA+ ATPase domain CYD28_RS00505 IPR017871 ABC transporter, conserved site CYD28_RS00505 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00525 IPR002656 Acyltransferase 3 CYD28_RS00530 IPR041038 TarS beta-glycosyltransferase C-terminal domain 1 CYD28_RS00530 IPR029044 Nucleotide-diphospho-sugar transferases CYD28_RS00530 IPR001173 Glycosyltransferase 2-like CYD28_RS00535 IPR006127 Periplasmic solute binding protein, ZnuA-like CYD28_RS00535 IPR006128 Adhesion lipoprotein CYD28_RS00535 IPR006129 Adhesin B CYD28_RS00540 IPR001626 ABC transporter, TroCD-like CYD28_RS00540 IPR037294 ABC transporter, BtuC-like CYD28_RS00545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00545 IPR003439 ABC transporter-like CYD28_RS00545 IPR003593 AAA+ ATPase domain CYD28_RS00545 IPR017871 ABC transporter, conserved site CYD28_RS00550 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CYD28_RS00550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00550 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CYD28_RS00555 IPR004685 Branched-chain amino acid transport system II carrier protein CYD28_RS00570 IPR039424 Solute-binding protein family 5 CYD28_RS00570 IPR000914 Solute-binding protein family 5 domain CYD28_RS00570 IPR030678 Peptide/nickel binding protein, MppA-type CYD28_RS00575 IPR035906 MetI-like superfamily CYD28_RS00575 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS00580 IPR035906 MetI-like superfamily CYD28_RS00580 IPR014157 Nickel ABC transporter, permease subunit NikC CYD28_RS00580 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS00585 IPR003593 AAA+ ATPase domain CYD28_RS00585 IPR017871 ABC transporter, conserved site CYD28_RS00585 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CYD28_RS00585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00585 IPR003439 ABC transporter-like CYD28_RS00590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00590 IPR014137 Nickel import ATP-binding protein NikE CYD28_RS00590 IPR015858 ABC transporter, nickel import, NikE CYD28_RS00590 IPR003439 ABC transporter-like CYD28_RS00590 IPR003593 AAA+ ATPase domain CYD28_RS00590 IPR017871 ABC transporter, conserved site CYD28_RS00610 IPR020846 Major facilitator superfamily domain CYD28_RS00610 IPR011701 Major facilitator superfamily CYD28_RS00610 IPR036259 MFS transporter superfamily CYD28_RS00615 IPR009061 Putative DNA-binding domain superfamily CYD28_RS00615 IPR000551 MerR-type HTH domain CYD28_RS00625 IPR002550 CNNM, transmembrane domain CYD28_RS00625 IPR036318 FAD-binding, type PCMH-like superfamily CYD28_RS00625 IPR016169 FAD-binding, type PCMH, subdomain 2 CYD28_RS00625 IPR005170 Transporter-associated domain CYD28_RS00625 IPR000644 CBS domain CYD28_RS00630 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS00630 IPR000944 Transcription regulator Rrf2-type CYD28_RS00630 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00635 IPR036291 NAD(P)-binding domain superfamily CYD28_RS00635 IPR016040 NAD(P)-binding domain CYD28_RS00655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00655 IPR003593 AAA+ ATPase domain CYD28_RS00655 IPR003439 ABC transporter-like CYD28_RS00660 IPR004841 Amino acid permease/ SLC12A domain CYD28_RS00660 IPR004840 Amino acid permease, conserved site CYD28_RS00685 IPR005877 YSIRK Gram-positive signal peptide CYD28_RS00685 IPR029058 Alpha/Beta hydrolase fold CYD28_RS00710 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CYD28_RS00710 IPR028082 Periplasmic binding protein-like I CYD28_RS00710 IPR000843 LacI-type HTH domain CYD28_RS00715 IPR029056 Ribokinase-like CYD28_RS00715 IPR002139 Ribokinase/fructokinase CYD28_RS00715 IPR011611 Carbohydrate kinase PfkB CYD28_RS00715 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CYD28_RS00715 IPR011877 Ribokinase CYD28_RS00720 IPR023064 D-ribose pyranase CYD28_RS00720 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU CYD28_RS00720 IPR023750 RbsD-like superfamily CYD28_RS00725 IPR003593 AAA+ ATPase domain CYD28_RS00725 IPR015861 ABC transporter, ribose import, RbsA CYD28_RS00725 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00725 IPR017871 ABC transporter, conserved site CYD28_RS00725 IPR003439 ABC transporter-like CYD28_RS00730 IPR001851 ABC transporter, permease CYD28_RS00735 IPR025997 Periplasmic binding protein CYD28_RS00735 IPR028082 Periplasmic binding protein-like I CYD28_RS00740 IPR036291 NAD(P)-binding domain superfamily CYD28_RS00740 IPR013332 Ketopantoate reductase, N-terminal domain CYD28_RS00740 IPR013752 Ketopantoate reductase, C-terminal domain CYD28_RS00740 IPR003710 Ketopantoate reductase ApbA/PanE CYD28_RS00740 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CYD28_RS00740 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CYD28_RS00745 IPR040442 Pyruvate kinase-like domain superfamily CYD28_RS00745 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CYD28_RS00745 IPR003700 Ketopantoate hydroxymethyltransferase CYD28_RS00750 IPR004821 Cytidyltransferase-like domain CYD28_RS00750 IPR003721 Pantoate-beta-alanine ligase CYD28_RS00750 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain CYD28_RS00750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS00755 IPR003190 Aspartate decarboxylase CYD28_RS00755 IPR009010 Aspartate decarboxylase-like domain superfamily CYD28_RS00765 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily CYD28_RS00765 IPR003709 Peptidase M15B CYD28_RS00770 IPR009057 Homeobox-like domain superfamily CYD28_RS00770 IPR000281 Helix-turn-helix protein RpiR CYD28_RS00770 IPR035472 RpiR-like, SIS domain CYD28_RS00770 IPR001347 Sugar isomerase (SIS) CYD28_RS00770 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00775 IPR036095 PTS system IIB component-like superfamily CYD28_RS00775 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CYD28_RS00775 IPR013012 Phosphotransferase system, EIIB component, type 3 CYD28_RS00780 IPR004501 Phosphotransferase system, EIIC component, type 3 CYD28_RS00780 IPR004796 Phosphotransferase system, cellobiose-type IIC component CYD28_RS00780 IPR003352 Phosphotransferase system, EIIC CYD28_RS00785 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit CYD28_RS00785 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily CYD28_RS00800 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CYD28_RS00810 IPR008523 Protein of unknown function DUF805 CYD28_RS00820 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CYD28_RS00820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS00820 IPR036678 MutS, connector domain superfamily CYD28_RS00820 IPR007860 DNA mismatch repair protein MutS, connector domain CYD28_RS00820 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CYD28_RS00820 IPR016151 DNA mismatch repair protein MutS, N-terminal CYD28_RS00820 IPR007696 DNA mismatch repair protein MutS, core CYD28_RS00820 IPR017261 DNA mismatch repair protein MutS/MSH CYD28_RS00820 IPR007861 DNA mismatch repair protein MutS, clamp CYD28_RS00820 IPR005748 DNA mismatch repair protein MutS CYD28_RS00820 IPR000432 DNA mismatch repair protein MutS, C-terminal CYD28_RS00825 IPR016787 Uncharacterised conserved protein UCP021328 CYD28_RS00830 IPR000802 Arsenical pump membrane protein, ArsB CYD28_RS00835 IPR029039 Flavoprotein-like superfamily CYD28_RS00835 IPR003680 Flavodoxin-like fold CYD28_RS00840 IPR018385 C4-dicarboxylate anaerobic carrier-like CYD28_RS00855 IPR023774 Putative metal-dependent hydrolase YfiT CYD28_RS00855 IPR034660 DinB/YfiT-like putative metalloenzymes CYD28_RS00855 IPR024775 DinB-like domain CYD28_RS00870 IPR004748 Polyol permease CYD28_RS00870 IPR020846 Major facilitator superfamily domain CYD28_RS00870 IPR011701 Major facilitator superfamily CYD28_RS00870 IPR036259 MFS transporter superfamily CYD28_RS00875 IPR036291 NAD(P)-binding domain superfamily CYD28_RS00875 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS00875 IPR020904 Short-chain dehydrogenase/reductase, conserved site CYD28_RS00890 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CYD28_RS00890 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS00890 IPR014614 Uncharacterised conserved protein UCP036654 CYD28_RS00895 IPR016161 Aldehyde/histidinol dehydrogenase CYD28_RS00895 IPR016162 Aldehyde dehydrogenase, N-terminal CYD28_RS00895 IPR016160 Aldehyde dehydrogenase, cysteine active site CYD28_RS00895 IPR016163 Aldehyde dehydrogenase, C-terminal CYD28_RS00895 IPR010102 Succinate semialdehyde dehydrogenase CYD28_RS00895 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CYD28_RS00895 IPR015590 Aldehyde dehydrogenase domain CYD28_RS00900 IPR013149 Alcohol dehydrogenase, C-terminal CYD28_RS00900 IPR013154 Alcohol dehydrogenase, N-terminal CYD28_RS00900 IPR011032 GroES-like superfamily CYD28_RS00900 IPR036291 NAD(P)-binding domain superfamily CYD28_RS00900 IPR020843 Polyketide synthase, enoylreductase domain CYD28_RS00900 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CYD28_RS00905 IPR000835 MarR-type HTH domain CYD28_RS00905 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS00905 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00910 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS00910 IPR023753 FAD/NAD(P)-binding domain CYD28_RS00910 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CYD28_RS00910 IPR006258 Dihydrolipoamide dehydrogenase CYD28_RS00910 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CYD28_RS00910 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD28_RS00910 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CYD28_RS00925 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS00925 IPR027619 Putative C-S lyase CYD28_RS00925 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS00925 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS00925 IPR004839 Aminotransferase, class I/classII CYD28_RS00935 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CYD28_RS00935 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD28_RS00935 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CYD28_RS00935 IPR006258 Dihydrolipoamide dehydrogenase CYD28_RS00935 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CYD28_RS00935 IPR023753 FAD/NAD(P)-binding domain CYD28_RS00935 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS00940 IPR029061 Thiamin diphosphate-binding fold CYD28_RS00940 IPR001017 Dehydrogenase, E1 component CYD28_RS00945 IPR033248 Transketolase, C-terminal domain CYD28_RS00945 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CYD28_RS00945 IPR029061 Thiamin diphosphate-binding fold CYD28_RS00945 IPR005475 Transketolase-like, pyrimidine-binding domain CYD28_RS00950 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CYD28_RS00950 IPR036625 E3-binding domain superfamily CYD28_RS00950 IPR004167 Peripheral subunit-binding domain CYD28_RS00950 IPR011053 Single hybrid motif CYD28_RS00950 IPR000089 Biotin/lipoyl attachment CYD28_RS00950 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CYD28_RS00955 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CYD28_RS00955 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS00955 IPR023753 FAD/NAD(P)-binding domain CYD28_RS00955 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CYD28_RS00955 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD28_RS00955 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CYD28_RS00955 IPR006258 Dihydrolipoamide dehydrogenase CYD28_RS00960 IPR005149 Transcription regulator PadR, N-terminal CYD28_RS00960 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00960 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS00970 IPR020904 Short-chain dehydrogenase/reductase, conserved site CYD28_RS00970 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS00970 IPR036291 NAD(P)-binding domain superfamily CYD28_RS00970 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CYD28_RS00975 IPR036291 NAD(P)-binding domain superfamily CYD28_RS00975 IPR013131 Mannitol dehydrogenase, N-terminal CYD28_RS00975 IPR023028 Mannitol-1-phosphate 5-dehydrogenase CYD28_RS00975 IPR000669 Mannitol dehydrogenase CYD28_RS00975 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CYD28_RS00975 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CYD28_RS00975 IPR013118 Mannitol dehydrogenase, C-terminal CYD28_RS00975 IPR023027 Mannitol dehydrogenase, conserved site CYD28_RS00980 IPR016152 Phosphotransferase/anion transporter CYD28_RS00980 IPR002178 PTS EIIA type-2 domain CYD28_RS00985 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CYD28_RS00985 IPR013196 Helix-turn-helix, type 11 CYD28_RS00985 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS00985 IPR011608 PRD domain CYD28_RS00985 IPR036634 PRD domain superfamily CYD28_RS00985 IPR016152 Phosphotransferase/anion transporter CYD28_RS00985 IPR002178 PTS EIIA type-2 domain CYD28_RS00985 IPR013011 Phosphotransferase system, EIIB component, type 2 CYD28_RS00985 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS00985 IPR007737 Mga helix-turn-helix domain CYD28_RS00985 IPR036095 PTS system IIB component-like superfamily CYD28_RS00990 IPR003352 Phosphotransferase system, EIIC CYD28_RS00990 IPR036095 PTS system IIB component-like superfamily CYD28_RS00990 IPR013011 Phosphotransferase system, EIIB component, type 2 CYD28_RS00990 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CYD28_RS00990 IPR029503 Phosphotransferase system EIIB component, mannitol-specific CYD28_RS00990 IPR013014 Phosphotransferase system, EIIC component, type 2 CYD28_RS00990 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC CYD28_RS01005 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon CYD28_RS01010 IPR000620 EamA domain CYD28_RS01010 IPR004626 RarD protein CYD28_RS01020 IPR007554 CDP-glycerol glycerophosphotransferase CYD28_RS01035 IPR003395 RecF/RecN/SMC, N-terminal CYD28_RS01035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01035 IPR042174 DNA-binding RecF, domain 2 CYD28_RS01035 IPR018078 DNA-binding, RecF, conserved site CYD28_RS01035 IPR001238 DNA-binding, RecF CYD28_RS01045 IPR023095 Adenine-specific methyltransferase, domain 2 CYD28_RS01045 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CYD28_RS01045 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS01045 IPR012327 D12 class N6 adenine-specific DNA methyltransferase CYD28_RS01045 IPR012263 Adenine modification methylase, M.EcoRV-type CYD28_RS01060 IPR005877 YSIRK Gram-positive signal peptide CYD28_RS01060 IPR011098 G5 domain CYD28_RS01060 IPR019948 Gram-positive LPXTG cell wall anchor CYD28_RS01060 IPR031477 E domain CYD28_RS01060 IPR019931 LPXTG cell wall anchor domain CYD28_RS01075 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator CYD28_RS01075 IPR000551 MerR-type HTH domain CYD28_RS01075 IPR009061 Putative DNA-binding domain superfamily CYD28_RS01080 IPR003680 Flavodoxin-like fold CYD28_RS01080 IPR029039 Flavoprotein-like superfamily CYD28_RS01080 IPR023048 NADH-azoreductase, FMN-dependent CYD28_RS01100 IPR007829 TM2 domain CYD28_RS01110 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CYD28_RS01110 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CYD28_RS01110 IPR006130 Aspartate/ornithine carbamoyltransferase CYD28_RS01110 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CYD28_RS01110 IPR002292 Ornithine/putrescine carbamoyltransferase CYD28_RS01110 IPR024904 Ornithine carbamoyltransferase CYD28_RS01115 IPR003964 Carbamate kinase CYD28_RS01115 IPR036393 Acetylglutamate kinase-like superfamily CYD28_RS01115 IPR001048 Aspartate/glutamate/uridylate kinase CYD28_RS01125 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CYD28_RS01125 IPR001387 Cro/C1-type helix-turn-helix domain CYD28_RS01125 IPR013430 Toxin-antitoxin system, antidote protein, HigA CYD28_RS01135 IPR004562 Lipoyltransferase/lipoate-protein ligase CYD28_RS01135 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CYD28_RS01135 IPR019491 Lipoate protein ligase, C-terminal CYD28_RS01140 IPR026590 Sirtuin family, catalytic core domain CYD28_RS01140 IPR026591 Sirtuin, catalytic core small domain superfamily CYD28_RS01140 IPR029035 DHS-like NAD/FAD-binding domain superfamily CYD28_RS01145 IPR002589 Macro domain CYD28_RS01145 IPR035801 Protein-ADP-ribose hydrolase, macro domain CYD28_RS01150 IPR000089 Biotin/lipoyl attachment CYD28_RS01150 IPR033753 Glycine cleavage system H-protein/Simiate CYD28_RS01150 IPR011053 Single hybrid motif CYD28_RS01150 IPR002930 Glycine cleavage system H-protein CYD28_RS01155 IPR036661 Luciferase-like domain superfamily CYD28_RS01155 IPR019949 Luciferase family oxidoreductase, group 1 CYD28_RS01155 IPR011251 Luciferase-like domain CYD28_RS01160 IPR013785 Aldolase-type TIM barrel CYD28_RS01160 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CYD28_RS01165 IPR010722 Biotin and thiamin synthesis-associated domain CYD28_RS01165 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CYD28_RS01165 IPR007197 Radical SAM CYD28_RS01165 IPR024177 Biotin synthase CYD28_RS01165 IPR006638 Elp3/MiaB/NifB CYD28_RS01165 IPR013785 Aldolase-type TIM barrel CYD28_RS01175 IPR030676 Citrate carrier CitT-related CYD28_RS01175 IPR001898 Solute carrier family 13 CYD28_RS01180 IPR008537 Protein of unknown function DUF819 CYD28_RS01185 IPR009906 D-glutamate cyclase CYD28_RS01185 IPR038021 Putative hydro-lyase CYD28_RS01185 IPR016938 Uncharacterised protein family UPF0317 CYD28_RS01195 IPR000060 BCCT transporter family CYD28_RS01200 IPR011059 Metal-dependent hydrolase, composite domain superfamily CYD28_RS01200 IPR006680 Amidohydrolase-related CYD28_RS01200 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CYD28_RS01200 IPR032466 Metal-dependent hydrolase CYD28_RS01210 IPR037171 NagB/RpiA transferase-like CYD28_RS01210 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CYD28_RS01210 IPR004547 Glucosamine-6-phosphate isomerase CYD28_RS01215 IPR011060 Ribulose-phosphate binding barrel CYD28_RS01215 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase CYD28_RS01215 IPR013785 Aldolase-type TIM barrel CYD28_RS01220 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS01220 IPR000281 Helix-turn-helix protein RpiR CYD28_RS01220 IPR001347 Sugar isomerase (SIS) CYD28_RS01220 IPR009057 Homeobox-like domain superfamily CYD28_RS01220 IPR035472 RpiR-like, SIS domain CYD28_RS01225 IPR004654 Glucokinase ROK CYD28_RS01225 IPR000600 ROK family CYD28_RS01230 IPR020625 Schiff base-forming aldolase, active site CYD28_RS01230 IPR005264 N-acetylneuraminate lyase CYD28_RS01230 IPR013785 Aldolase-type TIM barrel CYD28_RS01230 IPR002220 DapA-like CYD28_RS01235 IPR038377 Sodium/glucose symporter superfamily CYD28_RS01235 IPR001734 Sodium/solute symporter CYD28_RS01255 IPR003675 CAAX prenyl protease 2 CYD28_RS01260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01260 IPR014137 Nickel import ATP-binding protein NikE CYD28_RS01260 IPR015858 ABC transporter, nickel import, NikE CYD28_RS01260 IPR017871 ABC transporter, conserved site CYD28_RS01260 IPR003593 AAA+ ATPase domain CYD28_RS01260 IPR003439 ABC transporter-like CYD28_RS01265 IPR003439 ABC transporter-like CYD28_RS01265 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CYD28_RS01265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01265 IPR017871 ABC transporter, conserved site CYD28_RS01265 IPR003593 AAA+ ATPase domain CYD28_RS01270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS01270 IPR035906 MetI-like superfamily CYD28_RS01280 IPR023765 Solute-binding protein family 5, conserved site CYD28_RS01280 IPR030678 Peptide/nickel binding protein, MppA-type CYD28_RS01280 IPR039424 Solute-binding protein family 5 CYD28_RS01280 IPR000914 Solute-binding protein family 5 domain CYD28_RS01280 IPR011980 Nickel ABC transporter, substrate-binding protein NikA CYD28_RS01285 IPR029762 Pyroglutamyl peptidase I, bacterial-type CYD28_RS01285 IPR033694 Pyroglutamyl peptidase I, Cys active site CYD28_RS01285 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily CYD28_RS01285 IPR000816 Peptidase C15, pyroglutamyl peptidase I CYD28_RS01285 IPR033693 Pyroglutamyl peptidase I, Glu active site CYD28_RS01285 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CYD28_RS01300 IPR011701 Major facilitator superfamily CYD28_RS01300 IPR020846 Major facilitator superfamily domain CYD28_RS01300 IPR036259 MFS transporter superfamily CYD28_RS01305 IPR029132 Choloylglycine hydrolase/NAAA C-terminal CYD28_RS01305 IPR029055 Nucleophile aminohydrolases, N-terminal CYD28_RS01320 IPR011042 Six-bladed beta-propeller, TolB-like CYD28_RS01320 IPR013658 SMP-30/Gluconolactonase/LRE-like region CYD28_RS01325 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CYD28_RS01325 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CYD28_RS01325 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CYD28_RS01325 IPR005843 Alpha-D-phosphohexomutase, C-terminal CYD28_RS01325 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CYD28_RS01325 IPR016066 Alpha-D-phosphohexomutase, conserved site CYD28_RS01325 IPR005841 Alpha-D-phosphohexomutase superfamily CYD28_RS01325 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CYD28_RS01345 IPR010354 Oleate hydratase CYD28_RS01345 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS01350 IPR041552 UvrA DNA-binding domain CYD28_RS01350 IPR041102 UvrA, interaction domain CYD28_RS01350 IPR017871 ABC transporter, conserved site CYD28_RS01350 IPR003439 ABC transporter-like CYD28_RS01350 IPR004602 UvrABC system subunit A CYD28_RS01350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01350 IPR003593 AAA+ ATPase domain CYD28_RS01365 IPR003593 AAA+ ATPase domain CYD28_RS01365 IPR003439 ABC transporter-like CYD28_RS01365 IPR017871 ABC transporter, conserved site CYD28_RS01365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01375 IPR001387 Cro/C1-type helix-turn-helix domain CYD28_RS01375 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CYD28_RS01380 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS01380 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS01380 IPR000944 Transcription regulator Rrf2-type CYD28_RS01380 IPR030489 Transcription regulator Rrf2-type, conserved site CYD28_RS01385 IPR000620 EamA domain CYD28_RS01390 IPR036259 MFS transporter superfamily CYD28_RS01390 IPR020846 Major facilitator superfamily domain CYD28_RS01390 IPR011701 Major facilitator superfamily CYD28_RS01400 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CYD28_RS01400 IPR006179 5'-Nucleotidase/apyrase CYD28_RS01400 IPR006146 5'-Nucleotidase, conserved site CYD28_RS01400 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CYD28_RS01400 IPR008334 5'-Nucleotidase, C-terminal CYD28_RS01400 IPR041827 CpdB, N-terminal metallophosphatase domain CYD28_RS01400 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase CYD28_RS01400 IPR029052 Metallo-dependent phosphatase-like CYD28_RS01405 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein CYD28_RS01410 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01410 IPR003593 AAA+ ATPase domain CYD28_RS01410 IPR017871 ABC transporter, conserved site CYD28_RS01410 IPR012693 ABC transporter, phosphonate import, PhnC CYD28_RS01410 IPR003439 ABC transporter-like CYD28_RS01415 IPR035906 MetI-like superfamily CYD28_RS01415 IPR005769 ABC transporter, permease PhnE/PtxC CYD28_RS01415 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS01420 IPR005769 ABC transporter, permease PhnE/PtxC CYD28_RS01420 IPR035906 MetI-like superfamily CYD28_RS01420 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS01440 IPR019948 Gram-positive LPXTG cell wall anchor CYD28_RS01440 IPR022263 KxYKxGKxW signal peptide CYD28_RS01440 IPR019931 LPXTG cell wall anchor domain CYD28_RS01445 IPR014269 Accessory Sec system protein translocase subunit SecY2 CYD28_RS01445 IPR023201 SecY domain superfamily CYD28_RS01445 IPR002208 SecY/SEC61-alpha family CYD28_RS01450 IPR022372 Accessory secretory system protein Asp1 CYD28_RS01455 IPR029058 Alpha/Beta hydrolase fold CYD28_RS01455 IPR022267 Accessory Sec system protein Asp2 CYD28_RS01460 IPR022259 Accessory Sec system protein Asp3 CYD28_RS01465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01465 IPR011130 SecA, preprotein cross-linking domain CYD28_RS01465 IPR022490 Protein translocase subunit SecA2 CYD28_RS01465 IPR011115 SecA DEAD-like, N-terminal CYD28_RS01465 IPR000185 Protein translocase subunit SecA CYD28_RS01465 IPR036670 SecA, preprotein cross-linking domain superfamily CYD28_RS01465 IPR036266 SecA, Wing/Scaffold superfamily CYD28_RS01465 IPR014018 SecA motor DEAD CYD28_RS01465 IPR011116 SecA Wing/Scaffold CYD28_RS01470 IPR001296 Glycosyl transferase, family 1 CYD28_RS01470 IPR014267 Glycosyltransferase Gtf1 CYD28_RS01475 IPR014268 Glycosyltransferase-stabilising protein Gtf2 CYD28_RS01480 IPR003660 HAMP domain CYD28_RS01480 IPR005467 Histidine kinase domain CYD28_RS01480 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CYD28_RS01480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS01480 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CYD28_RS01485 IPR001867 OmpR/PhoB-type DNA-binding domain CYD28_RS01485 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS01485 IPR039420 Transcriptional regulatory protein WalR-like CYD28_RS01485 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS01485 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS01485 IPR011006 CheY-like superfamily CYD28_RS01505 IPR002569 Peptide methionine sulphoxide reductase MsrA CYD28_RS01505 IPR028427 Peptide methionine sulfoxide reductase CYD28_RS01505 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CYD28_RS01525 IPR004734 Multidrug resistance protein CYD28_RS01525 IPR011701 Major facilitator superfamily CYD28_RS01525 IPR036259 MFS transporter superfamily CYD28_RS01525 IPR020846 Major facilitator superfamily domain CYD28_RS01535 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CYD28_RS01540 IPR004869 Membrane transport protein MMPL domain CYD28_RS01540 IPR000731 Sterol-sensing domain CYD28_RS01545 IPR000847 Transcription regulator HTH, LysR CYD28_RS01545 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS01545 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS01545 IPR005119 LysR, substrate-binding CYD28_RS01550 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) CYD28_RS01550 IPR029052 Metallo-dependent phosphatase-like CYD28_RS01550 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CYD28_RS01555 IPR002988 Protein G-related albumin-binding (GA) module CYD28_RS01560 IPR018385 C4-dicarboxylate anaerobic carrier-like CYD28_RS01565 IPR001996 Phosphotransferase system, IIB component, type 1 CYD28_RS01565 IPR036878 Glucose permease domain IIB CYD28_RS01565 IPR011299 PTS system glucose-specific IIBC component CYD28_RS01565 IPR013013 Phosphotransferase system, EIIC component, type 1 CYD28_RS01565 IPR003352 Phosphotransferase system, EIIC CYD28_RS01565 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CYD28_RS01565 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CYD28_RS01565 IPR011055 Duplicated hybrid motif CYD28_RS01570 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CYD28_RS01570 IPR007921 CHAP domain CYD28_RS01570 IPR007921 CHAP domain CYD28_RS01570 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CYD28_RS01570 IPR038765 Papain-like cysteine peptidase superfamily CYD28_RS01570 IPR038765 Papain-like cysteine peptidase superfamily CYD28_RS01575 IPR013525 ABC-2 type transporter CYD28_RS01575 IPR017500 Phage infection protein, YhgE, N-terminal CYD28_RS01575 IPR017501 Phage infection protein, YhgE, C-terminal CYD28_RS01600 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS01600 IPR020900 Arginine repressor, DNA-binding domain CYD28_RS01600 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS01600 IPR020899 Arginine repressor, C-terminal CYD28_RS01600 IPR001669 Arginine repressor CYD28_RS01600 IPR036251 Arginine repressor, C-terminal domain superfamily CYD28_RS01605 IPR003876 Arginine deiminase CYD28_RS01610 IPR022461 Arginine/ornithine antiporter CYD28_RS01610 IPR004754 Amino acid antiporter CYD28_RS01610 IPR002293 Amino acid/polyamine transporter I CYD28_RS01615 IPR000595 Cyclic nucleotide-binding domain CYD28_RS01615 IPR018490 Cyclic nucleotide-binding-like CYD28_RS01615 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS01625 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CYD28_RS01625 IPR000843 LacI-type HTH domain CYD28_RS01625 IPR006377 Catabolite control protein A CYD28_RS01625 IPR028082 Periplasmic binding protein-like I CYD28_RS01635 IPR013154 Alcohol dehydrogenase, N-terminal CYD28_RS01635 IPR013149 Alcohol dehydrogenase, C-terminal CYD28_RS01635 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CYD28_RS01635 IPR011032 GroES-like superfamily CYD28_RS01635 IPR036291 NAD(P)-binding domain superfamily CYD28_RS01635 IPR014183 Alcohol dehydrogenase class III CYD28_RS01640 IPR025962 SdpI/YhfL protein family CYD28_RS01650 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CYD28_RS01650 IPR012000 Thiamine pyrophosphate enzyme, central domain CYD28_RS01650 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CYD28_RS01650 IPR000399 TPP-binding enzyme, conserved site CYD28_RS01650 IPR029061 Thiamin diphosphate-binding fold CYD28_RS01650 IPR017764 Indole-3-pyruvate decarboxylase, Enterobacteriaceae CYD28_RS01650 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme CYD28_RS01650 IPR029035 DHS-like NAD/FAD-binding domain superfamily CYD28_RS01660 IPR003680 Flavodoxin-like fold CYD28_RS01660 IPR029039 Flavoprotein-like superfamily CYD28_RS01660 IPR023048 NADH-azoreductase, FMN-dependent CYD28_RS01670 IPR005701 Polysaccharide export protein MPA1-like CYD28_RS01670 IPR003856 Polysaccharide chain length determinant N-terminal domain CYD28_RS01675 IPR025669 AAA domain CYD28_RS01675 IPR005702 Exopolysaccharide synthesis protein CYD28_RS01675 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01680 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC CYD28_RS01680 IPR016195 Polymerase/histidinol phosphatase-like CYD28_RS01685 IPR036291 NAD(P)-binding domain superfamily CYD28_RS01685 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS01685 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CYD28_RS01690 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CYD28_RS01690 IPR036291 NAD(P)-binding domain superfamily CYD28_RS01690 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain CYD28_RS01695 IPR001509 NAD-dependent epimerase/dehydratase CYD28_RS01695 IPR036291 NAD(P)-binding domain superfamily CYD28_RS01695 IPR011051 RmlC-like cupin domain superfamily CYD28_RS01695 IPR014710 RmlC-like jelly roll fold CYD28_RS01700 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CYD28_RS01700 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CYD28_RS01705 IPR001451 Hexapeptide repeat CYD28_RS01705 IPR018357 Hexapeptide transferase, conserved site CYD28_RS01705 IPR011004 Trimeric LpxA-like superfamily CYD28_RS01725 IPR001296 Glycosyl transferase, family 1 CYD28_RS01725 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CYD28_RS01725 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI CYD28_RS01730 IPR003362 Bacterial sugar transferase CYD28_RS01735 IPR036291 NAD(P)-binding domain superfamily CYD28_RS01735 IPR001509 NAD-dependent epimerase/dehydratase CYD28_RS01740 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CYD28_RS01740 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CYD28_RS01740 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CYD28_RS01740 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CYD28_RS01740 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CYD28_RS01740 IPR036291 NAD(P)-binding domain superfamily CYD28_RS01740 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CYD28_RS01740 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily CYD28_RS01745 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CYD28_RS01745 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CYD28_RS01750 IPR004474 Cell envelope-related transcriptional attenuator domain CYD28_RS01750 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU CYD28_RS01755 IPR001952 Alkaline phosphatase CYD28_RS01755 IPR018299 Alkaline phosphatase, active site CYD28_RS01755 IPR017850 Alkaline-phosphatase-like, core domain superfamily CYD28_RS01760 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS01760 IPR039420 Transcriptional regulatory protein WalR-like CYD28_RS01760 IPR011006 CheY-like superfamily CYD28_RS01760 IPR001867 OmpR/PhoB-type DNA-binding domain CYD28_RS01760 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS01760 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS01765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CYD28_RS01765 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS01765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS01765 IPR005467 Histidine kinase domain CYD28_RS01765 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CYD28_RS01770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01770 IPR017871 ABC transporter, conserved site CYD28_RS01770 IPR003439 ABC transporter-like CYD28_RS01770 IPR003593 AAA+ ATPase domain CYD28_RS01800 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase CYD28_RS01800 IPR002500 Phosphoadenosine phosphosulphate reductase CYD28_RS01800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS01800 IPR011798 Adenosine 5'-phosphosulphate reductase CYD28_RS01805 IPR001433 Oxidoreductase FAD/NAD(P)-binding CYD28_RS01805 IPR017938 Riboflavin synthase-like beta-barrel CYD28_RS01805 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily CYD28_RS01805 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CYD28_RS01805 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain CYD28_RS01805 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding CYD28_RS01805 IPR001094 Flavodoxin-like CYD28_RS01805 IPR008254 Flavodoxin/nitric oxide synthase CYD28_RS01805 IPR029039 Flavoprotein-like superfamily CYD28_RS01805 IPR017927 FAD-binding domain, ferredoxin reductase-type CYD28_RS01805 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CYD28_RS01810 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit CYD28_RS01810 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CYD28_RS01810 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CYD28_RS01810 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CYD28_RS01810 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CYD28_RS01815 IPR000878 Tetrapyrrole methylase CYD28_RS01815 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CYD28_RS01815 IPR006366 Uroporphyrin-III C-methyltransferase CYD28_RS01815 IPR014776 Tetrapyrrole methylase, subdomain 2 CYD28_RS01815 IPR014777 Tetrapyrrole methylase, subdomain 1 CYD28_RS01815 IPR035996 Tetrapyrrole methylase superfamily CYD28_RS01820 IPR028281 Siroheme synthase, central domain CYD28_RS01820 IPR036291 NAD(P)-binding domain superfamily CYD28_RS01820 IPR028161 Siroheme biosynthesis protein Met8 CYD28_RS01820 IPR006367 Sirohaem synthase, N-terminal CYD28_RS01825 IPR002781 Transmembrane protein TauE-like CYD28_RS01830 IPR002650 Sulphate adenylyltransferase CYD28_RS01830 IPR020792 Sulphate adenylyltransferase, prokaryotic-type CYD28_RS01830 IPR024951 Sulphate adenylyltransferase catalytic domain CYD28_RS01830 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS01830 IPR015947 PUA-like superfamily CYD28_RS01830 IPR025980 ATP-sulfurylase PUA-like domain CYD28_RS01835 IPR002891 Adenylyl-sulfate kinase CYD28_RS01835 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01840 IPR004680 Citrate transporter-like domain CYD28_RS01840 IPR014738 Citrate transporter CYD28_RS01845 IPR007921 CHAP domain CYD28_RS01845 IPR038765 Papain-like cysteine peptidase superfamily CYD28_RS01855 IPR004668 Anaerobic c4-dicarboxylate membrane transporter CYD28_RS01860 IPR018093 BCCT transporter, conserved site CYD28_RS01860 IPR000060 BCCT transporter family CYD28_RS01865 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS01865 IPR026282 DNA-binding protein, MJ1563 type CYD28_RS01865 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS01875 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal CYD28_RS01875 IPR011533 Oxygen-dependent choline dehydrogenase CYD28_RS01875 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal CYD28_RS01875 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS01875 IPR012132 Glucose-methanol-choline oxidoreductase CYD28_RS01875 IPR027424 Glucose Oxidase, domain 2 CYD28_RS01880 IPR020449 Transcription regulator HTH, AraC- type CYD28_RS01880 IPR018060 DNA binding HTH domain, AraC-type CYD28_RS01880 IPR009057 Homeobox-like domain superfamily CYD28_RS01880 IPR017853 Glycoside hydrolase superfamily CYD28_RS01880 IPR037923 Transcription regulator HTH-like CYD28_RS01885 IPR017439 Amidohydrolase CYD28_RS01885 IPR002933 Peptidase M20 CYD28_RS01885 IPR011650 Peptidase M20, dimerisation domain CYD28_RS01885 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS01890 IPR020846 Major facilitator superfamily domain CYD28_RS01890 IPR036259 MFS transporter superfamily CYD28_RS01890 IPR011701 Major facilitator superfamily CYD28_RS01895 IPR017439 Amidohydrolase CYD28_RS01895 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS01895 IPR002933 Peptidase M20 CYD28_RS01895 IPR011650 Peptidase M20, dimerisation domain CYD28_RS01910 IPR042099 AMP-dependent synthetase-like superfamily CYD28_RS01910 IPR025110 AMP-binding enzyme, C-terminal domain CYD28_RS01910 IPR020845 AMP-binding, conserved site CYD28_RS01910 IPR000873 AMP-dependent synthetase/ligase CYD28_RS01920 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS01920 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS01920 IPR005119 LysR, substrate-binding CYD28_RS01920 IPR000847 Transcription regulator HTH, LysR CYD28_RS01930 IPR036637 Phosphohistidine domain superfamily CYD28_RS01930 IPR013815 ATP-grasp fold, subdomain 1 CYD28_RS01930 IPR008279 PEP-utilising enzyme, mobile domain CYD28_RS01930 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CYD28_RS01930 IPR023151 PEP-utilising enzyme, conserved site CYD28_RS01930 IPR000121 PEP-utilising enzyme, C-terminal CYD28_RS01930 IPR010121 Pyruvate, phosphate dikinase CYD28_RS01930 IPR018274 PEP-utilising enzyme, active site CYD28_RS01930 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CYD28_RS01930 IPR040442 Pyruvate kinase-like domain superfamily CYD28_RS01935 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein CYD28_RS01935 IPR005177 Bifunctional kinase-pyrophosphorylase CYD28_RS01940 IPR006231 Malate:quinone-oxidoreductase CYD28_RS01940 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS01950 IPR017853 Glycoside hydrolase superfamily CYD28_RS01950 IPR001360 Glycoside hydrolase family 1 CYD28_RS01950 IPR018120 Glycoside hydrolase family 1, active site CYD28_RS01950 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CYD28_RS01970 IPR013785 Aldolase-type TIM barrel CYD28_RS01970 IPR000741 Fructose-bisphosphate aldolase, class-I CYD28_RS01970 IPR023014 Fructose-bisphosphate aldolase class I, Gram positive bacteria-type CYD28_RS01975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS01975 IPR033690 Adenylate kinase, conserved site CYD28_RS01975 IPR000850 Adenylate kinase/UMP-CMP kinase CYD28_RS01975 IPR006259 Adenylate kinase subfamily CYD28_RS02000 IPR004872 Lipoprotein NlpA family CYD28_RS02005 IPR005814 Aminotransferase class-III CYD28_RS02005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS02005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS02005 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS02010 IPR002293 Amino acid/polyamine transporter I CYD28_RS02015 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CYD28_RS02015 IPR029035 DHS-like NAD/FAD-binding domain superfamily CYD28_RS02015 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CYD28_RS02015 IPR012000 Thiamine pyrophosphate enzyme, central domain CYD28_RS02015 IPR029061 Thiamin diphosphate-binding fold CYD28_RS02015 IPR012782 Acetolactate synthase, catabolic CYD28_RS02015 IPR000399 TPP-binding enzyme, conserved site CYD28_RS02020 IPR005128 Alpha-acetolactate decarboxylase CYD28_RS02040 IPR001584 Integrase, catalytic core CYD28_RS02040 IPR012337 Ribonuclease H-like superfamily CYD28_RS02040 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS02055 IPR003828 Epoxyqueuosine reductase QueH CYD28_RS02065 IPR001295 Dihydroorotate dehydrogenase, conserved site CYD28_RS02065 IPR005719 Dihydroorotate dehydrogenase, class 2 CYD28_RS02065 IPR013785 Aldolase-type TIM barrel CYD28_RS02065 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CYD28_RS02065 IPR005720 Dihydroorotate dehydrogenase domain CYD28_RS02100 IPR009242 Protein of unknown function DUF896 CYD28_RS02105 IPR011251 Luciferase-like domain CYD28_RS02105 IPR019945 F420-dependent glucose-6-phosphate dehydrogenase-related CYD28_RS02105 IPR019944 F420-dependent glucose-6-phosphate dehydrogenase CYD28_RS02105 IPR036661 Luciferase-like domain superfamily CYD28_RS02115 IPR011055 Duplicated hybrid motif CYD28_RS02115 IPR016047 Peptidase M23 CYD28_RS02125 IPR022488 Polyphosphate kinase-2-related CYD28_RS02125 IPR022489 Polyphosphate:AMP phosphotransferase CYD28_RS02125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS02130 IPR023346 Lysozyme-like domain superfamily CYD28_RS02140 IPR002937 Amine oxidase CYD28_RS02140 IPR014105 Carotenoid/retinoid oxidoreductase CYD28_RS02140 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS02145 IPR029044 Nucleotide-diphospho-sugar transferases CYD28_RS02145 IPR001173 Glycosyltransferase 2-like CYD28_RS02150 IPR019845 Squalene/phytoene synthase, conserved site CYD28_RS02150 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head CYD28_RS02150 IPR008949 Isoprenoid synthase domain superfamily CYD28_RS02155 IPR002937 Amine oxidase CYD28_RS02155 IPR014105 Carotenoid/retinoid oxidoreductase CYD28_RS02155 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS02160 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS02160 IPR004839 Aminotransferase, class I/classII CYD28_RS02160 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS02160 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS02165 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYD28_RS02165 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CYD28_RS02165 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CYD28_RS02165 IPR036291 NAD(P)-binding domain superfamily CYD28_RS02165 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CYD28_RS02170 IPR036163 Heavy metal-associated domain superfamily CYD28_RS02170 IPR000428 Copper ion binding protein CYD28_RS02170 IPR017969 Heavy-metal-associated, conserved site CYD28_RS02170 IPR006122 Heavy metal-associated domain, copper ion-binding CYD28_RS02170 IPR006121 Heavy metal-associated domain, HMA CYD28_RS02175 IPR023299 P-type ATPase, cytoplasmic domain N CYD28_RS02175 IPR036412 HAD-like superfamily CYD28_RS02175 IPR018303 P-type ATPase, phosphorylation site CYD28_RS02175 IPR027256 P-type ATPase, subfamily IB CYD28_RS02175 IPR006121 Heavy metal-associated domain, HMA CYD28_RS02175 IPR036163 Heavy metal-associated domain superfamily CYD28_RS02175 IPR023214 HAD superfamily CYD28_RS02175 IPR008250 P-type ATPase, A domain superfamily CYD28_RS02175 IPR023298 P-type ATPase, transmembrane domain superfamily CYD28_RS02175 IPR001757 P-type ATPase CYD28_RS02175 IPR006122 Heavy metal-associated domain, copper ion-binding CYD28_RS02175 IPR017969 Heavy-metal-associated, conserved site CYD28_RS02185 IPR020904 Short-chain dehydrogenase/reductase, conserved site CYD28_RS02185 IPR036291 NAD(P)-binding domain superfamily CYD28_RS02185 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS02190 IPR011004 Trimeric LpxA-like superfamily CYD28_RS02190 IPR024688 Maltose/galactoside acetyltransferase CYD28_RS02190 IPR001451 Hexapeptide repeat CYD28_RS02195 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CYD28_RS02195 IPR016162 Aldehyde dehydrogenase, N-terminal CYD28_RS02195 IPR015590 Aldehyde dehydrogenase domain CYD28_RS02195 IPR005932 1-pyrroline-5-carboxylate dehydrogenase CYD28_RS02195 IPR016160 Aldehyde dehydrogenase, cysteine active site CYD28_RS02195 IPR016163 Aldehyde dehydrogenase, C-terminal CYD28_RS02195 IPR016161 Aldehyde/histidinol dehydrogenase CYD28_RS02215 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CYD28_RS02215 IPR004488 Magnesium/cobalt transport protein CorA CYD28_RS02225 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CYD28_RS02225 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS02225 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CYD28_RS02225 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily CYD28_RS02225 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CYD28_RS02225 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain CYD28_RS02225 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CYD28_RS02230 IPR011554 Hydroxymethylglutaryl-CoA synthase, prokaryotic CYD28_RS02230 IPR013528 Hydroxymethylglutaryl-coenzyme A synthase, N-terminal CYD28_RS02230 IPR016039 Thiolase-like CYD28_RS02230 IPR013746 Hydroxymethylglutaryl-coenzyme A synthase C-terminal domain CYD28_RS02235 IPR020613 Thiolase, conserved site CYD28_RS02235 IPR020617 Thiolase, C-terminal CYD28_RS02235 IPR020610 Thiolase, active site CYD28_RS02235 IPR020615 Thiolase, acyl-enzyme intermediate active site CYD28_RS02235 IPR016039 Thiolase-like CYD28_RS02235 IPR002155 Thiolase CYD28_RS02235 IPR020616 Thiolase, N-terminal CYD28_RS02240 IPR004553 Hydroxymethylglutaryl-CoA reductase, bacterial-type CYD28_RS02240 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II CYD28_RS02240 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site CYD28_RS02240 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily CYD28_RS02240 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily CYD28_RS02240 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily CYD28_RS02245 IPR038765 Papain-like cysteine peptidase superfamily CYD28_RS02245 IPR018392 LysM domain CYD28_RS02245 IPR007921 CHAP domain CYD28_RS02245 IPR036779 LysM domain superfamily CYD28_RS02255 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS02255 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS02255 IPR000847 Transcription regulator HTH, LysR CYD28_RS02255 IPR005119 LysR, substrate-binding CYD28_RS02265 IPR023760 Holin-like protein CidA CYD28_RS02265 IPR005538 LrgA/CidA family CYD28_RS02270 IPR007300 CidB/LrgB family CYD28_RS02275 IPR029035 DHS-like NAD/FAD-binding domain superfamily CYD28_RS02275 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CYD28_RS02275 IPR000399 TPP-binding enzyme, conserved site CYD28_RS02275 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CYD28_RS02275 IPR012000 Thiamine pyrophosphate enzyme, central domain CYD28_RS02275 IPR029061 Thiamin diphosphate-binding fold CYD28_RS02280 IPR001584 Integrase, catalytic core CYD28_RS02280 IPR012337 Ribonuclease H-like superfamily CYD28_RS02280 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS02285 IPR036878 Glucose permease domain IIB CYD28_RS02285 IPR011055 Duplicated hybrid motif CYD28_RS02285 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CYD28_RS02285 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CYD28_RS02285 IPR013013 Phosphotransferase system, EIIC component, type 1 CYD28_RS02285 IPR011299 PTS system glucose-specific IIBC component CYD28_RS02285 IPR001996 Phosphotransferase system, IIB component, type 1 CYD28_RS02285 IPR003352 Phosphotransferase system, EIIC CYD28_RS02290 IPR036291 NAD(P)-binding domain superfamily CYD28_RS02290 IPR013149 Alcohol dehydrogenase, C-terminal CYD28_RS02290 IPR013154 Alcohol dehydrogenase, N-terminal CYD28_RS02290 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CYD28_RS02290 IPR020843 Polyketide synthase, enoylreductase domain CYD28_RS02290 IPR011032 GroES-like superfamily CYD28_RS02300 IPR013766 Thioredoxin domain CYD28_RS02300 IPR036249 Thioredoxin-like superfamily CYD28_RS02305 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CYD28_RS02305 IPR011304 L-lactate dehydrogenase CYD28_RS02305 IPR018177 L-lactate dehydrogenase, active site CYD28_RS02305 IPR022383 Lactate/malate dehydrogenase, C-terminal CYD28_RS02305 IPR001236 Lactate/malate dehydrogenase, N-terminal CYD28_RS02305 IPR036291 NAD(P)-binding domain superfamily CYD28_RS02305 IPR001557 L-lactate/malate dehydrogenase CYD28_RS02310 IPR029058 Alpha/Beta hydrolase fold CYD28_RS02310 IPR013094 Alpha/beta hydrolase fold-3 CYD28_RS02315 IPR000620 EamA domain CYD28_RS02325 IPR003313 AraC-type arabinose-binding/dimerisation domain CYD28_RS02325 IPR009057 Homeobox-like domain superfamily CYD28_RS02325 IPR037923 Transcription regulator HTH-like CYD28_RS02325 IPR020449 Transcription regulator HTH, AraC- type CYD28_RS02325 IPR018060 DNA binding HTH domain, AraC-type CYD28_RS02325 IPR014710 RmlC-like jelly roll fold CYD28_RS02325 IPR018062 HTH domain AraC-type, conserved site CYD28_RS02335 IPR008337 Capsule biosynthesis protein CapB CYD28_RS02335 IPR036565 Mur-like, catalytic domain superfamily CYD28_RS02335 IPR013221 Mur ligase, central CYD28_RS02340 IPR008338 Capsule biosynthesis protein CapC CYD28_RS02350 IPR029055 Nucleophile aminohydrolases, N-terminal CYD28_RS02355 IPR018483 Carbohydrate kinase, FGGY, conserved site CYD28_RS02355 IPR018484 Carbohydrate kinase, FGGY, N-terminal CYD28_RS02355 IPR000577 Carbohydrate kinase, FGGY CYD28_RS02355 IPR006000 Xylulokinase CYD28_RS02355 IPR018485 Carbohydrate kinase, FGGY, C-terminal CYD28_RS02365 IPR005131 Serine dehydratase beta chain CYD28_RS02365 IPR002912 ACT domain CYD28_RS02365 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit CYD28_RS02365 IPR029009 Allosteric substrate binding domain superfamily CYD28_RS02370 IPR004642 Serine dehydratase, alpha subunit CYD28_RS02370 IPR005130 Serine dehydratase-like, alpha subunit CYD28_RS02380 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS02380 IPR000182 GNAT domain CYD28_RS02385 IPR005754 Sortase family CYD28_RS02385 IPR042007 Sortase A CYD28_RS02385 IPR023365 Sortase domain superfamily CYD28_RS02390 IPR036412 HAD-like superfamily CYD28_RS02390 IPR000150 Cof family CYD28_RS02390 IPR023938 HMP-PP phosphatase CYD28_RS02390 IPR006379 HAD-superfamily hydrolase, subfamily IIB CYD28_RS02395 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CYD28_RS02395 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CYD28_RS02395 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CYD28_RS02395 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYD28_RS02395 IPR036291 NAD(P)-binding domain superfamily CYD28_RS02405 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CYD28_RS02405 IPR016162 Aldehyde dehydrogenase, N-terminal CYD28_RS02405 IPR015590 Aldehyde dehydrogenase domain CYD28_RS02405 IPR016163 Aldehyde dehydrogenase, C-terminal CYD28_RS02405 IPR016161 Aldehyde/histidinol dehydrogenase CYD28_RS02405 IPR016160 Aldehyde dehydrogenase, cysteine active site CYD28_RS02415 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II CYD28_RS02415 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYD28_RS02415 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYD28_RS02415 IPR037523 Vicinal oxygen chelate (VOC) domain CYD28_RS02430 IPR016163 Aldehyde dehydrogenase, C-terminal CYD28_RS02430 IPR016161 Aldehyde/histidinol dehydrogenase CYD28_RS02430 IPR016160 Aldehyde dehydrogenase, cysteine active site CYD28_RS02430 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CYD28_RS02430 IPR015590 Aldehyde dehydrogenase domain CYD28_RS02430 IPR016162 Aldehyde dehydrogenase, N-terminal CYD28_RS02435 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS02435 IPR023187 Transcriptional regulator MarR-type, conserved site CYD28_RS02435 IPR000835 MarR-type HTH domain CYD28_RS02435 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS02440 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYD28_RS02440 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYD28_RS02440 IPR037523 Vicinal oxygen chelate (VOC) domain CYD28_RS02445 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYD28_RS02445 IPR037523 Vicinal oxygen chelate (VOC) domain CYD28_RS02445 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYD28_RS02450 IPR029058 Alpha/Beta hydrolase fold CYD28_RS02450 IPR002925 Dienelactone hydrolase CYD28_RS02455 IPR038728 Uncharacterized membrane protein YkvI CYD28_RS02465 IPR009164 Fructose-1,6-bisphosphatase class 3 CYD28_RS02470 IPR032816 SNARE associated Golgi protein CYD28_RS02475 IPR012730 Molybdopterin synthase sulfurylase MoeB CYD28_RS02475 IPR000594 THIF-type NAD/FAD binding fold CYD28_RS02475 IPR035985 Ubiquitin-activating enzyme CYD28_RS02480 IPR008867 Thiazole synthase CYD28_RS02480 IPR033983 Thiazole synthase ThiG CYD28_RS02480 IPR013785 Aldolase-type TIM barrel CYD28_RS02485 IPR008867 Thiazole synthase CYD28_RS02485 IPR003749 Sulfur carrier ThiS/MoaD-like CYD28_RS02485 IPR010035 ThiS, thiamine-biosynthesis CYD28_RS02485 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CYD28_RS02485 IPR012675 Beta-grasp domain superfamily CYD28_RS02485 IPR013785 Aldolase-type TIM barrel CYD28_RS02485 IPR033983 Thiazole synthase ThiG CYD28_RS02490 IPR012727 Glycine oxidase ThiO CYD28_RS02490 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS02490 IPR006076 FAD dependent oxidoreductase CYD28_RS02500 IPR020846 Major facilitator superfamily domain CYD28_RS02500 IPR036259 MFS transporter superfamily CYD28_RS02500 IPR011701 Major facilitator superfamily CYD28_RS02500 IPR000849 Sugar phosphate transporter CYD28_RS02515 IPR018691 Protein of unknown function DUF2188 CYD28_RS02520 IPR007685 RelA/SpoT CYD28_RS02535 IPR008920 Transcription regulator FadR/GntR, C-terminal CYD28_RS02535 IPR011711 GntR, C-terminal CYD28_RS02535 IPR000524 Transcription regulator HTH, GntR CYD28_RS02535 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS02535 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS02540 IPR018484 Carbohydrate kinase, FGGY, N-terminal CYD28_RS02540 IPR018485 Carbohydrate kinase, FGGY, C-terminal CYD28_RS02540 IPR000577 Carbohydrate kinase, FGGY CYD28_RS02540 IPR018483 Carbohydrate kinase, FGGY, conserved site CYD28_RS02540 IPR006002 Gluconate kinase CYD28_RS02545 IPR003474 Gluconate transporter CYD28_RS02555 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CYD28_RS02555 IPR005835 Nucleotidyl transferase domain CYD28_RS02555 IPR029044 Nucleotide-diphospho-sugar transferases CYD28_RS02560 IPR000086 NUDIX hydrolase domain CYD28_RS02560 IPR015797 NUDIX hydrolase-like domain superfamily CYD28_RS02560 IPR020084 NUDIX hydrolase, conserved site CYD28_RS02560 IPR020476 NUDIX hydrolase CYD28_RS02585 IPR036291 NAD(P)-binding domain superfamily CYD28_RS02585 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS02590 IPR002933 Peptidase M20 CYD28_RS02590 IPR011650 Peptidase M20, dimerisation domain CYD28_RS02590 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS02590 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase CYD28_RS02595 IPR003414 Polyphosphate kinase CYD28_RS02595 IPR024953 Polyphosphate kinase middle domain CYD28_RS02595 IPR036830 Polyphosphate kinase middle domain superfamily CYD28_RS02595 IPR025200 Polyphosphate kinase C-terminal domain 2 CYD28_RS02595 IPR025198 Polyphosphate kinase N-terminal domain CYD28_RS02595 IPR041108 Polyphosphate kinase, C-terminal domain 1 CYD28_RS02595 IPR036832 Polyphosphate kinase N-terminal domain superfamily CYD28_RS02600 IPR003695 Ppx/GppA phosphatase CYD28_RS02605 IPR011540 AbgT, Proteobacteria CYD28_RS02605 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT CYD28_RS02610 IPR036291 NAD(P)-binding domain superfamily CYD28_RS02610 IPR020904 Short-chain dehydrogenase/reductase, conserved site CYD28_RS02610 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS02615 IPR023367 Peptidase M42, domain 2 CYD28_RS02615 IPR008007 Peptidase M42 CYD28_RS02625 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS02625 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS02625 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS02625 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CYD28_RS02625 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CYD28_RS02630 IPR013785 Aldolase-type TIM barrel CYD28_RS02630 IPR024188 Glutamate synthase large subunit-like protein CYD28_RS02630 IPR002932 Glutamate synthase domain CYD28_RS02630 IPR027283 Glutamate synthase large subunit-like protein, bacteria CYD28_RS02645 IPR003593 AAA+ ATPase domain CYD28_RS02645 IPR003439 ABC transporter-like CYD28_RS02645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS02645 IPR017871 ABC transporter, conserved site CYD28_RS02650 IPR005226 UPF0014 family CYD28_RS02655 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CYD28_RS02655 IPR005467 Histidine kinase domain CYD28_RS02655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS02655 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CYD28_RS02655 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS02655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CYD28_RS02660 IPR011006 CheY-like superfamily CYD28_RS02660 IPR001867 OmpR/PhoB-type DNA-binding domain CYD28_RS02660 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS02660 IPR039420 Transcriptional regulatory protein WalR-like CYD28_RS02660 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS02660 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS02670 IPR036259 MFS transporter superfamily CYD28_RS02670 IPR020846 Major facilitator superfamily domain CYD28_RS02670 IPR011701 Major facilitator superfamily CYD28_RS02675 IPR029058 Alpha/Beta hydrolase fold CYD28_RS02675 IPR002018 Carboxylesterase, type B CYD28_RS02675 IPR019826 Carboxylesterase type B, active site CYD28_RS02675 IPR019819 Carboxylesterase type B, conserved site CYD28_RS02675 IPR000997 Cholinesterase CYD28_RS02680 IPR002293 Amino acid/polyamine transporter I CYD28_RS02685 IPR016786 Uncharacterised protein YdeI, bacterial CYD28_RS02685 IPR014922 Domain of unknown function DUF1801 CYD28_RS02690 IPR013154 Alcohol dehydrogenase, N-terminal CYD28_RS02690 IPR013149 Alcohol dehydrogenase, C-terminal CYD28_RS02690 IPR011032 GroES-like superfamily CYD28_RS02690 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CYD28_RS02690 IPR020843 Polyketide synthase, enoylreductase domain CYD28_RS02690 IPR036291 NAD(P)-binding domain superfamily CYD28_RS02695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS02695 IPR005892 Glycine betaine transport ATP-binding subunit CYD28_RS02695 IPR017871 ABC transporter, conserved site CYD28_RS02695 IPR000644 CBS domain CYD28_RS02695 IPR003593 AAA+ ATPase domain CYD28_RS02695 IPR003439 ABC transporter-like CYD28_RS02700 IPR035906 MetI-like superfamily CYD28_RS02700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS02705 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CYD28_RS02710 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS02710 IPR035906 MetI-like superfamily CYD28_RS02715 IPR007300 CidB/LrgB family CYD28_RS02715 IPR024891 Antiholin-like protein LrgB CYD28_RS02720 IPR005538 LrgA/CidA family CYD28_RS02720 IPR023736 Antiholin-like protein LrgA CYD28_RS02725 IPR011006 CheY-like superfamily CYD28_RS02725 IPR007492 LytTR DNA-binding domain CYD28_RS02725 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS02730 IPR003018 GAF domain CYD28_RS02730 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CYD28_RS02730 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS02730 IPR010559 Signal transduction histidine kinase, internal region CYD28_RS02730 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS02735 IPR011701 Major facilitator superfamily CYD28_RS02735 IPR020846 Major facilitator superfamily domain CYD28_RS02735 IPR036259 MFS transporter superfamily CYD28_RS02740 IPR013752 Ketopantoate reductase, C-terminal domain CYD28_RS02740 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CYD28_RS02740 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CYD28_RS02740 IPR036291 NAD(P)-binding domain superfamily CYD28_RS02740 IPR013332 Ketopantoate reductase, N-terminal domain CYD28_RS02740 IPR003710 Ketopantoate reductase ApbA/PanE CYD28_RS02745 IPR009898 Protein of unknown function DUF1440 CYD28_RS02755 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes CYD28_RS02755 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CYD28_RS02755 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CYD28_RS02760 IPR012338 Beta-lactamase/transpeptidase-like CYD28_RS02760 IPR001466 Beta-lactamase-related CYD28_RS02765 IPR002293 Amino acid/polyamine transporter I CYD28_RS02770 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria CYD28_RS02770 IPR018422 Cation/H+ exchanger, CPA1 family CYD28_RS02770 IPR006153 Cation/H+ exchanger CYD28_RS02775 IPR004841 Amino acid permease/ SLC12A domain CYD28_RS02775 IPR004840 Amino acid permease, conserved site CYD28_RS02795 IPR041698 Methyltransferase domain 25 CYD28_RS02795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS02800 IPR012312 Haemerythrin-like CYD28_RS02800 IPR023551 Iron-sulfur cluster repair protein ScdA CYD28_RS02800 IPR038062 ScdA-like, N-terminal domain superfamily CYD28_RS02800 IPR019903 Repair of iron centres family CYD28_RS02805 IPR004734 Multidrug resistance protein CYD28_RS02805 IPR036259 MFS transporter superfamily CYD28_RS02805 IPR020846 Major facilitator superfamily domain CYD28_RS02805 IPR011701 Major facilitator superfamily CYD28_RS02805 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CYD28_RS02815 IPR004381 Glycerate kinase CYD28_RS02815 IPR036129 Glycerate kinase superfamily CYD28_RS02815 IPR018193 Glycerate kinase, flavodoxin-like fold CYD28_RS02815 IPR018197 Glycerate kinase, restriction-enzyme-like fold CYD28_RS02830 IPR027469 Cation efflux transmembrane domain superfamily CYD28_RS02830 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CYD28_RS02830 IPR027470 Cation efflux protein, cytoplasmic domain CYD28_RS02830 IPR002524 Cation efflux protein CYD28_RS02835 IPR023346 Lysozyme-like domain superfamily CYD28_RS02840 IPR029033 Histidine phosphatase superfamily CYD28_RS02840 IPR005952 Phosphoglycerate mutase 1 CYD28_RS02840 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CYD28_RS02840 IPR013078 Histidine phosphatase superfamily, clade-1 CYD28_RS02850 IPR020846 Major facilitator superfamily domain CYD28_RS02850 IPR036259 MFS transporter superfamily CYD28_RS02850 IPR004638 Drug resistance transporter EmrB-like CYD28_RS02850 IPR011701 Major facilitator superfamily CYD28_RS02855 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CYD28_RS02855 IPR018313 Solute-binding protein family 3, conserved site CYD28_RS02860 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CYD28_RS02860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS02860 IPR035906 MetI-like superfamily CYD28_RS02865 IPR003439 ABC transporter-like CYD28_RS02865 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CYD28_RS02865 IPR017871 ABC transporter, conserved site CYD28_RS02865 IPR003593 AAA+ ATPase domain CYD28_RS02865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS02870 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS02870 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CYD28_RS02870 IPR003447 FemABX peptidyl transferase CYD28_RS02885 IPR006129 Adhesin B CYD28_RS02885 IPR012674 Calycin CYD28_RS02885 IPR006128 Adhesion lipoprotein CYD28_RS02885 IPR015304 ZinT domain CYD28_RS02885 IPR006127 Periplasmic solute binding protein, ZnuA-like CYD28_RS02890 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily CYD28_RS02890 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CYD28_RS02915 IPR007419 BFD-like [2Fe-2S]-binding domain CYD28_RS02915 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily CYD28_RS02915 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CYD28_RS02915 IPR017121 Nitrite reductase [NAD(P)H], large subunit CYD28_RS02915 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB CYD28_RS02915 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site CYD28_RS02915 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily CYD28_RS02915 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal CYD28_RS02915 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CYD28_RS02915 IPR023753 FAD/NAD(P)-binding domain CYD28_RS02915 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS02915 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CYD28_RS02920 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type CYD28_RS02920 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CYD28_RS02920 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily CYD28_RS02925 IPR014776 Tetrapyrrole methylase, subdomain 2 CYD28_RS02925 IPR014777 Tetrapyrrole methylase, subdomain 1 CYD28_RS02925 IPR035996 Tetrapyrrole methylase superfamily CYD28_RS02925 IPR000878 Tetrapyrrole methylase CYD28_RS02925 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CYD28_RS02925 IPR006366 Uroporphyrin-III C-methyltransferase CYD28_RS02930 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CYD28_RS02930 IPR006468 Nitrate reductase, alpha subunit CYD28_RS02930 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CYD28_RS02930 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CYD28_RS02930 IPR006656 Molybdopterin oxidoreductase CYD28_RS02930 IPR006657 Molybdopterin dinucleotide-binding domain CYD28_RS02930 IPR037943 Nitrate reductase alpha subunit-like, MopB domain CYD28_RS02930 IPR009010 Aspartate decarboxylase-like domain superfamily CYD28_RS02930 IPR028189 Nitrate reductase, alpha subunit, N-terminal CYD28_RS02935 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYD28_RS02935 IPR029263 Respiratory nitrate reductase beta, C-terminal CYD28_RS02935 IPR038262 Nitrate reductase beta, C-terminal domain superfamily CYD28_RS02935 IPR006547 Nitrate reductase, beta subunit CYD28_RS02940 IPR036411 TorD-like superfamily CYD28_RS02940 IPR003765 Nitrate reductase chaperone, NarJ CYD28_RS02940 IPR042290 Nitrate reductase chaperone, NarJ, domain 1 CYD28_RS02940 IPR020945 DMSO/Nitrate reductase chaperone CYD28_RS02940 IPR042291 Nitrate reductase chaperone, NarJ, domain 2 CYD28_RS02945 IPR003816 Nitrate reductase, gamma subunit CYD28_RS02945 IPR036197 NarG-like superfamily CYD28_RS02945 IPR023234 NarG-like domain CYD28_RS02955 IPR017203 Signal transduction histidine kinase, NreB CYD28_RS02955 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS02955 IPR005467 Histidine kinase domain CYD28_RS02955 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CYD28_RS02955 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CYD28_RS02955 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS02960 IPR000792 Transcription regulator LuxR, C-terminal CYD28_RS02960 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS02960 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS02960 IPR011006 CheY-like superfamily CYD28_RS02965 IPR011701 Major facilitator superfamily CYD28_RS02965 IPR020846 Major facilitator superfamily domain CYD28_RS02965 IPR036259 MFS transporter superfamily CYD28_RS02970 IPR008978 HSP20-like chaperone CYD28_RS02970 IPR002068 Alpha crystallin/Hsp20 domain CYD28_RS02970 IPR031107 Small heat shock protein HSP20 CYD28_RS02975 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS02975 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS02975 IPR000835 MarR-type HTH domain CYD28_RS02985 IPR001991 Sodium:dicarboxylate symporter CYD28_RS02985 IPR018107 Sodium:dicarboxylate symporter, conserved site CYD28_RS02985 IPR033380 Glutamate-aspartate symport protein GltP/GltT CYD28_RS02985 IPR036458 Sodium:dicarboxylate symporter superfamily CYD28_RS02990 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS02990 IPR012337 Ribonuclease H-like superfamily CYD28_RS02990 IPR001584 Integrase, catalytic core CYD28_RS03000 IPR012349 FMN-binding split barrel CYD28_RS03000 IPR038725 General stress protein, FMN-binding split barrel domain CYD28_RS03005 IPR018062 HTH domain AraC-type, conserved site CYD28_RS03005 IPR018060 DNA binding HTH domain, AraC-type CYD28_RS03005 IPR020449 Transcription regulator HTH, AraC- type CYD28_RS03005 IPR009057 Homeobox-like domain superfamily CYD28_RS03015 IPR013013 Phosphotransferase system, EIIC component, type 1 CYD28_RS03015 IPR036878 Glucose permease domain IIB CYD28_RS03015 IPR010973 Phosphotransferase system, sucrose-specific IIBC component CYD28_RS03015 IPR001996 Phosphotransferase system, IIB component, type 1 CYD28_RS03015 IPR003352 Phosphotransferase system, EIIC CYD28_RS03015 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CYD28_RS03030 IPR017501 Phage infection protein, YhgE, C-terminal CYD28_RS03030 IPR017500 Phage infection protein, YhgE, N-terminal CYD28_RS03030 IPR023908 xxxLxxG heptad repeat CYD28_RS03060 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS03060 IPR023753 FAD/NAD(P)-binding domain CYD28_RS03060 IPR022890 Ferredoxin--NADP reductase, type 2 CYD28_RS03065 IPR006464 N-acetyltransferase RimI/Ard1 CYD28_RS03065 IPR000182 GNAT domain CYD28_RS03065 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS03070 IPR013149 Alcohol dehydrogenase, C-terminal CYD28_RS03070 IPR020843 Polyketide synthase, enoylreductase domain CYD28_RS03070 IPR036291 NAD(P)-binding domain superfamily CYD28_RS03070 IPR011032 GroES-like superfamily CYD28_RS03070 IPR013154 Alcohol dehydrogenase, N-terminal CYD28_RS03070 IPR014188 Acrylyl-CoA reductase AcuI CYD28_RS03075 IPR018976 Imelysin-like domain CYD28_RS03075 IPR034981 EfeO/Algp7, imelysin-like domain CYD28_RS03075 IPR038352 Imelysin-like domain superfamily CYD28_RS03080 IPR006314 Dyp-type peroxidase CYD28_RS03080 IPR006313 Deferrochelatase/peroxidase EfeB CYD28_RS03080 IPR006311 Twin-arginine translocation pathway, signal sequence CYD28_RS03080 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CYD28_RS03080 IPR011008 Dimeric alpha-beta barrel CYD28_RS03085 IPR004923 Iron permease FTR1/Fip1/EfeU CYD28_RS03090 IPR002033 Sec-independent periplasmic protein translocase TatC CYD28_RS03090 IPR019820 Sec-independent periplasmic protein translocase, conserved site CYD28_RS03095 IPR003369 Sec-independent protein translocase protein TatA/B/E CYD28_RS03095 IPR006312 Sec-independent protein translocase protein TatA/E CYD28_RS03100 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS03100 IPR000182 GNAT domain CYD28_RS03105 IPR029044 Nucleotide-diphospho-sugar transferases CYD28_RS03105 IPR001173 Glycosyltransferase 2-like CYD28_RS03105 IPR007554 CDP-glycerol glycerophosphotransferase CYD28_RS03110 IPR003804 L-lactate permease CYD28_RS03115 IPR031356 Stealth protein CR4, conserved region 4 CYD28_RS03115 IPR031358 Stealth protein CR1, conserved region 1 CYD28_RS03115 IPR001296 Glycosyl transferase, family 1 CYD28_RS03115 IPR021520 Stealth protein CR2, conserved region 2 CYD28_RS03115 IPR031357 Stealth protein CR3, conserved region 3 CYD28_RS03120 IPR006231 Malate:quinone-oxidoreductase CYD28_RS03120 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS03130 IPR007492 LytTR DNA-binding domain CYD28_RS03135 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CYD28_RS03135 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CYD28_RS03135 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CYD28_RS03135 IPR005467 Histidine kinase domain CYD28_RS03135 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS03135 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS03135 IPR003660 HAMP domain CYD28_RS03140 IPR011006 CheY-like superfamily CYD28_RS03140 IPR001867 OmpR/PhoB-type DNA-binding domain CYD28_RS03140 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS03140 IPR039420 Transcriptional regulatory protein WalR-like CYD28_RS03140 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS03145 IPR003838 ABC transporter permease protein domain CYD28_RS03150 IPR003593 AAA+ ATPase domain CYD28_RS03150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS03150 IPR003439 ABC transporter-like CYD28_RS03160 IPR011991 ArsR-like helix-turn-helix domain CYD28_RS03160 IPR000835 MarR-type HTH domain CYD28_RS03160 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS03160 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS03165 IPR023599 Membrane-associated protein TcaA CYD28_RS03170 IPR036259 MFS transporter superfamily CYD28_RS03170 IPR004812 Drug resistance transporter Bcr/CmlA subfamily CYD28_RS03170 IPR011701 Major facilitator superfamily CYD28_RS03170 IPR020846 Major facilitator superfamily domain CYD28_RS03180 IPR011053 Single hybrid motif CYD28_RS03185 IPR004638 Drug resistance transporter EmrB-like CYD28_RS03185 IPR011701 Major facilitator superfamily CYD28_RS03185 IPR036259 MFS transporter superfamily CYD28_RS03185 IPR020846 Major facilitator superfamily domain CYD28_RS03210 IPR004488 Magnesium/cobalt transport protein CorA CYD28_RS03210 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CYD28_RS03215 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent CYD28_RS03215 IPR013785 Aldolase-type TIM barrel CYD28_RS03215 IPR000262 FMN-dependent dehydrogenase CYD28_RS03220 IPR004445 Sodium/glutamate symport carrier protein GltS CYD28_RS03225 IPR011034 Formyl transferase-like, C-terminal domain superfamily CYD28_RS03225 IPR003180 Methylpurine-DNA glycosylase CYD28_RS03225 IPR036995 Methylpurine-DNA glycosylase superfamily CYD28_RS03230 IPR001387 Cro/C1-type helix-turn-helix domain CYD28_RS03230 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CYD28_RS03240 IPR003844 Uncharacterised protein family UPF0060 CYD28_RS03245 IPR014718 Glycoside hydrolase-type carbohydrate-binding CYD28_RS03245 IPR015443 Aldose 1-epimerase CYD28_RS03245 IPR011013 Galactose mutarotase-like domain superfamily CYD28_RS03245 IPR018052 Aldose 1-epimerase, conserved site CYD28_RS03245 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase CYD28_RS03250 IPR005302 Molybdenum cofactor sulfurase, C-terminal CYD28_RS03250 IPR005163 3-alpha domain CYD28_RS03250 IPR011037 Pyruvate kinase-like, insert domain superfamily CYD28_RS03255 IPR037171 NagB/RpiA transferase-like CYD28_RS03255 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup CYD28_RS03255 IPR004788 Ribose 5-phosphate isomerase, type A CYD28_RS03260 IPR001584 Integrase, catalytic core CYD28_RS03260 IPR012337 Ribonuclease H-like superfamily CYD28_RS03260 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS03265 IPR003675 CAAX prenyl protease 2 CYD28_RS03270 IPR005923 Formiminoglutamase CYD28_RS03270 IPR006035 Ureohydrolase CYD28_RS03270 IPR023696 Ureohydrolase domain superfamily CYD28_RS03280 IPR011650 Peptidase M20, dimerisation domain CYD28_RS03280 IPR017439 Amidohydrolase CYD28_RS03280 IPR002933 Peptidase M20 CYD28_RS03280 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS03285 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS03285 IPR020904 Short-chain dehydrogenase/reductase, conserved site CYD28_RS03285 IPR036291 NAD(P)-binding domain superfamily CYD28_RS03290 IPR002563 Flavin reductase like domain CYD28_RS03290 IPR012349 FMN-binding split barrel CYD28_RS03305 IPR000281 Helix-turn-helix protein RpiR CYD28_RS03305 IPR035472 RpiR-like, SIS domain CYD28_RS03305 IPR001347 Sugar isomerase (SIS) CYD28_RS03305 IPR009057 Homeobox-like domain superfamily CYD28_RS03305 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS03310 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CYD28_RS03310 IPR036878 Glucose permease domain IIB CYD28_RS03310 IPR003352 Phosphotransferase system, EIIC CYD28_RS03310 IPR013013 Phosphotransferase system, EIIC component, type 1 CYD28_RS03310 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CYD28_RS03310 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component CYD28_RS03310 IPR001996 Phosphotransferase system, IIB component, type 1 CYD28_RS03320 IPR006439 HAD hydrolase, subfamily IA CYD28_RS03320 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CYD28_RS03320 IPR023214 HAD superfamily CYD28_RS03320 IPR041492 Haloacid dehalogenase-like hydrolase CYD28_RS03320 IPR036412 HAD-like superfamily CYD28_RS03340 IPR004841 Amino acid permease/ SLC12A domain CYD28_RS03340 IPR004840 Amino acid permease, conserved site CYD28_RS03345 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS03345 IPR001584 Integrase, catalytic core CYD28_RS03345 IPR012337 Ribonuclease H-like superfamily CYD28_RS03350 IPR022821 Transcription regulator HTH, MurR CYD28_RS03350 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS03350 IPR001347 Sugar isomerase (SIS) CYD28_RS03350 IPR009057 Homeobox-like domain superfamily CYD28_RS03350 IPR035472 RpiR-like, SIS domain CYD28_RS03350 IPR000281 Helix-turn-helix protein RpiR CYD28_RS03355 IPR003352 Phosphotransferase system, EIIC CYD28_RS03355 IPR036878 Glucose permease domain IIB CYD28_RS03355 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CYD28_RS03355 IPR013013 Phosphotransferase system, EIIC component, type 1 CYD28_RS03355 IPR001996 Phosphotransferase system, IIB component, type 1 CYD28_RS03360 IPR001347 Sugar isomerase (SIS) CYD28_RS03360 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein CYD28_RS03360 IPR005486 Glucokinase regulatory protein, conserved site CYD28_RS03360 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ CYD28_RS03375 IPR028349 Protein PafC CYD28_RS03375 IPR013196 Helix-turn-helix, type 11 CYD28_RS03375 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS03375 IPR001034 DeoR-type HTH domain CYD28_RS03375 IPR026881 WYL domain CYD28_RS03375 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS03390 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CYD28_RS03390 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site CYD28_RS03390 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain CYD28_RS03390 IPR006478 Formate dehydrogenase, alpha subunit CYD28_RS03390 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain CYD28_RS03390 IPR036010 2Fe-2S ferredoxin-like superfamily CYD28_RS03390 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYD28_RS03390 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site CYD28_RS03390 IPR009010 Aspartate decarboxylase-like domain superfamily CYD28_RS03390 IPR041924 Formate dehydrogenase H, N-terminal CYD28_RS03390 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYD28_RS03390 IPR006657 Molybdopterin dinucleotide-binding domain CYD28_RS03390 IPR006656 Molybdopterin oxidoreductase CYD28_RS03395 IPR003593 AAA+ ATPase domain CYD28_RS03395 IPR003959 ATPase, AAA-type, core CYD28_RS03395 IPR019489 Clp ATPase, C-terminal CYD28_RS03395 IPR004487 Clp protease, ATP-binding subunit ClpX CYD28_RS03395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS03395 IPR010603 Zinc finger, ClpX C4-type CYD28_RS03395 IPR038366 Zinc finger, ClpX C4-type superfamily CYD28_RS03410 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS03410 IPR002938 FAD-binding domain CYD28_RS03415 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CYD28_RS03415 IPR036291 NAD(P)-binding domain superfamily CYD28_RS03415 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CYD28_RS03415 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYD28_RS03420 IPR000390 Small multidrug resistance protein family CYD28_RS03425 IPR000390 Small multidrug resistance protein family CYD28_RS03430 IPR038765 Papain-like cysteine peptidase superfamily CYD28_RS03430 IPR007921 CHAP domain CYD28_RS03440 IPR003421 Opine dehydrogenase CYD28_RS03440 IPR013332 Ketopantoate reductase, N-terminal domain CYD28_RS03440 IPR036291 NAD(P)-binding domain superfamily CYD28_RS03440 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CYD28_RS03440 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CYD28_RS03445 IPR004770 Na+/H+ antiporter NhaC CYD28_RS03445 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CYD28_RS03450 IPR012337 Ribonuclease H-like superfamily CYD28_RS03450 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS03450 IPR001584 Integrase, catalytic core CYD28_RS03455 IPR007921 CHAP domain CYD28_RS03455 IPR038765 Papain-like cysteine peptidase superfamily CYD28_RS03465 IPR001207 Transposase, mutator type CYD28_RS03485 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS03485 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS03485 IPR010166 Transcriptional regulator SarA/Rot CYD28_RS03490 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain CYD28_RS03490 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CYD28_RS03490 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal CYD28_RS03490 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CYD28_RS03490 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily CYD28_RS03490 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily CYD28_RS03495 IPR002491 ABC transporter periplasmic binding domain CYD28_RS03500 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site CYD28_RS03500 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CYD28_RS03500 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CYD28_RS03500 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA CYD28_RS03500 IPR036452 Ribonucleoside hydrolase-like CYD28_RS03505 IPR003784 BioY protein CYD28_RS03515 IPR016193 Cytidine deaminase-like CYD28_RS03515 IPR003786 Sulfur carrier protein FdhD CYD28_RS03520 IPR005950 Molybdate ABC transporter, substrate-binding protein CYD28_RS03520 IPR041879 YvgL-like, substrate binding domain CYD28_RS03525 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS03525 IPR035906 MetI-like superfamily CYD28_RS03525 IPR011867 Molybdate ABC transporter, permease protein CYD28_RS03530 IPR003593 AAA+ ATPase domain CYD28_RS03530 IPR003439 ABC transporter-like CYD28_RS03530 IPR008995 Molybdate/tungstate binding, C-terminal CYD28_RS03530 IPR011868 Molybdate ABC transporter, ATP-binding protein CYD28_RS03530 IPR015852 ABC transporter, molybdenum import, ModC CYD28_RS03530 IPR005116 Transport-associated OB, type 1 CYD28_RS03530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS03530 IPR004606 Molybdenum-pterin binding CYD28_RS03530 IPR017871 ABC transporter, conserved site CYD28_RS03535 IPR000594 THIF-type NAD/FAD binding fold CYD28_RS03535 IPR035985 Ubiquitin-activating enzyme CYD28_RS03540 IPR008284 Molybdenum cofactor biosynthesis, conserved site CYD28_RS03540 IPR001453 MoaB/Mog domain CYD28_RS03540 IPR012245 Molybdenum cofactor biosynthesis protein MoaB CYD28_RS03540 IPR036425 MoaB/Mog-like domain superfamily CYD28_RS03545 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CYD28_RS03545 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily CYD28_RS03545 IPR023045 Molybdenum cofactor biosynthesis C CYD28_RS03550 IPR038987 Molybdopterin biosynthesis protein MoeA-like CYD28_RS03550 IPR036135 MoeA, N-terminal and linker domain superfamily CYD28_RS03550 IPR005110 MoeA, N-terminal and linker domain CYD28_RS03550 IPR005111 MoeA, C-terminal, domain IV CYD28_RS03550 IPR036688 MoeA, C-terminal, domain IV superfamily CYD28_RS03550 IPR036425 MoaB/Mog-like domain superfamily CYD28_RS03550 IPR001453 MoaB/Mog domain CYD28_RS03560 IPR003448 Molybdopterin biosynthesis MoaE CYD28_RS03560 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily CYD28_RS03565 IPR003749 Sulfur carrier ThiS/MoaD-like CYD28_RS03565 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CYD28_RS03565 IPR012675 Beta-grasp domain superfamily CYD28_RS03570 IPR025877 MobA-like NTP transferase CYD28_RS03570 IPR029044 Nucleotide-diphospho-sugar transferases CYD28_RS03570 IPR013482 Molybdenum cofactor guanylyltransferase CYD28_RS03575 IPR010505 Molybdenum cofactor synthesis C-terminal CYD28_RS03575 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CYD28_RS03575 IPR007197 Radical SAM CYD28_RS03575 IPR013785 Aldolase-type TIM barrel CYD28_RS03575 IPR006638 Elp3/MiaB/NifB CYD28_RS03575 IPR013483 Molybdenum cofactor biosynthesis protein A CYD28_RS03580 IPR000835 MarR-type HTH domain CYD28_RS03580 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS03580 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS03580 IPR010166 Transcriptional regulator SarA/Rot CYD28_RS03590 IPR000835 MarR-type HTH domain CYD28_RS03590 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS03590 IPR023187 Transcriptional regulator MarR-type, conserved site CYD28_RS03590 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS03605 IPR003447 FemABX peptidyl transferase CYD28_RS03605 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS03610 IPR001036 Acriflavin resistance protein CYD28_RS03610 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CYD28_RS03625 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS03625 IPR020904 Short-chain dehydrogenase/reductase, conserved site CYD28_RS03625 IPR036291 NAD(P)-binding domain superfamily CYD28_RS03630 IPR010651 Sugar transport protein CYD28_RS03640 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CYD28_RS03640 IPR023406 DNA topoisomerase, type IA, active site CYD28_RS03640 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CYD28_RS03640 IPR005738 DNA topoisomerase III CYD28_RS03640 IPR000380 DNA topoisomerase, type IA CYD28_RS03640 IPR013497 DNA topoisomerase, type IA, central CYD28_RS03640 IPR003601 DNA topoisomerase, type IA, domain 2 CYD28_RS03640 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CYD28_RS03640 IPR006171 TOPRIM domain CYD28_RS03640 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CYD28_RS03640 IPR023405 DNA topoisomerase, type IA, core domain CYD28_RS03640 IPR034144 DNA topoisomerase 3-like, TOPRIM domain CYD28_RS03645 IPR006043 Xanthine/uracil/vitamin C permease CYD28_RS03645 IPR026033 Azaguanine-like transporters CYD28_RS03655 IPR036838 Ribosomal protein S10 domain superfamily CYD28_RS03655 IPR027486 Ribosomal protein S10 domain CYD28_RS03655 IPR001848 Ribosomal protein S10 CYD28_RS03655 IPR018268 Ribosomal protein S10, conserved site CYD28_RS03660 IPR009000 Translation protein, beta-barrel domain superfamily CYD28_RS03660 IPR019926 Ribosomal protein L3, conserved site CYD28_RS03660 IPR000597 Ribosomal protein L3 CYD28_RS03660 IPR019927 Ribosomal protein L3, bacterial/organelle-type CYD28_RS03665 IPR023574 Ribosomal protein L4 domain superfamily CYD28_RS03665 IPR013005 50S ribosomal protein uL4 CYD28_RS03665 IPR002136 Ribosomal protein L4/L1e CYD28_RS03670 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily CYD28_RS03670 IPR012678 Ribosomal protein L23/L15e core domain superfamily CYD28_RS03670 IPR013025 Ribosomal protein L25/L23 CYD28_RS03675 IPR022666 Ribosomal Proteins L2, RNA binding domain CYD28_RS03675 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS03675 IPR008991 Translation protein SH3-like domain superfamily CYD28_RS03675 IPR014722 Ribosomal protein L2, domain 2 CYD28_RS03675 IPR002171 Ribosomal protein L2 CYD28_RS03675 IPR022671 Ribosomal protein L2, conserved site CYD28_RS03675 IPR022669 Ribosomal protein L2, C-terminal CYD28_RS03675 IPR005880 Ribosomal protein L2, bacterial/organellar-type CYD28_RS03675 IPR014726 Ribosomal protein L2, domain 3 CYD28_RS03680 IPR005732 Ribosomal protein S19, bacterial-type CYD28_RS03680 IPR002222 Ribosomal protein S19/S15 CYD28_RS03680 IPR020934 Ribosomal protein S19 conserved site CYD28_RS03680 IPR023575 Ribosomal protein S19, superfamily CYD28_RS03685 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CYD28_RS03685 IPR018260 Ribosomal protein L22/L17, conserved site CYD28_RS03685 IPR036394 Ribosomal protein L22/L17 superfamily CYD28_RS03685 IPR001063 Ribosomal protein L22/L17 CYD28_RS03690 IPR005704 Ribosomal protein S3, bacterial-type CYD28_RS03690 IPR004087 K Homology domain CYD28_RS03690 IPR015946 K homology domain-like, alpha/beta CYD28_RS03690 IPR018280 Ribosomal protein S3, conserved site CYD28_RS03690 IPR004044 K Homology domain, type 2 CYD28_RS03690 IPR009019 K homology domain superfamily, prokaryotic type CYD28_RS03690 IPR036419 Ribosomal protein S3, C-terminal domain superfamily CYD28_RS03690 IPR001351 Ribosomal protein S3, C-terminal CYD28_RS03695 IPR020798 Ribosomal protein L16, conserved site CYD28_RS03695 IPR000114 Ribosomal protein L16 CYD28_RS03695 IPR036920 Ribosomal protein L10e/L16 superfamily CYD28_RS03695 IPR016180 Ribosomal protein L10e/L16 CYD28_RS03700 IPR036049 Ribosomal protein L29/L35 superfamily CYD28_RS03700 IPR001854 Ribosomal protein L29/L35 CYD28_RS03705 IPR000266 Ribosomal protein S17/S11 CYD28_RS03705 IPR019984 30S ribosomal protein S17 CYD28_RS03705 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS03705 IPR019979 Ribosomal protein S17, conserved site CYD28_RS03710 IPR036853 Ribosomal protein L14 superfamily CYD28_RS03710 IPR000218 Ribosomal protein L14P CYD28_RS03710 IPR005745 Ribosomal protein L14P, bacterial-type CYD28_RS03710 IPR019972 Ribosomal protein L14P, conserved site CYD28_RS03715 IPR005825 Ribosomal protein L24/L26, conserved site CYD28_RS03715 IPR005824 KOW CYD28_RS03715 IPR041988 Ribosomal Protein L26/L24, KOW domain CYD28_RS03715 IPR008991 Translation protein SH3-like domain superfamily CYD28_RS03715 IPR003256 Ribosomal protein L24 CYD28_RS03715 IPR014722 Ribosomal protein L2, domain 2 CYD28_RS03720 IPR022803 Ribosomal protein L5 domain superfamily CYD28_RS03720 IPR002132 Ribosomal protein L5 CYD28_RS03720 IPR020930 Ribosomal protein L5, bacterial-type CYD28_RS03720 IPR031309 Ribosomal protein L5, C-terminal CYD28_RS03720 IPR031310 Ribosomal protein L5, N-terminal CYD28_RS03720 IPR020929 Ribosomal protein L5, conserved site CYD28_RS03725 IPR018271 Ribosomal protein S14, conserved site CYD28_RS03725 IPR023053 Ribosomal protein S14, type Z CYD28_RS03725 IPR001209 Ribosomal protein S14 CYD28_RS03730 IPR000630 Ribosomal protein S8 CYD28_RS03730 IPR035987 Ribosomal protein S8 superfamily CYD28_RS03735 IPR019906 Ribosomal protein L6, bacterial-type CYD28_RS03735 IPR000702 Ribosomal protein L6 CYD28_RS03735 IPR020040 Ribosomal protein L6, alpha-beta domain CYD28_RS03735 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily CYD28_RS03735 IPR002358 Ribosomal protein L6, conserved site CYD28_RS03740 IPR004389 Ribosomal protein L18, bacterial-type CYD28_RS03740 IPR005484 Ribosomal protein L18 CYD28_RS03745 IPR018192 Ribosomal protein S5, N-terminal, conserved site CYD28_RS03745 IPR013810 Ribosomal protein S5, N-terminal CYD28_RS03745 IPR000851 Ribosomal protein S5 CYD28_RS03745 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS03745 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS03745 IPR005324 Ribosomal protein S5, C-terminal CYD28_RS03745 IPR005712 Ribosomal protein S5, bacterial-type CYD28_RS03750 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CYD28_RS03750 IPR005996 Ribosomal protein L30, bacterial-type CYD28_RS03750 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily CYD28_RS03755 IPR001196 Ribosomal protein L15, conserved site CYD28_RS03755 IPR030878 Ribosomal protein L15 CYD28_RS03755 IPR005749 Ribosomal protein L15, bacterial-type CYD28_RS03755 IPR021131 Ribosomal protein L18e/L15P CYD28_RS03755 IPR036227 Ribosomal L18e/L15P superfamily CYD28_RS03760 IPR002208 SecY/SEC61-alpha family CYD28_RS03760 IPR030659 SecY conserved site CYD28_RS03760 IPR023201 SecY domain superfamily CYD28_RS03760 IPR026593 Protein translocase subunit SecY CYD28_RS03765 IPR006259 Adenylate kinase subfamily CYD28_RS03765 IPR000850 Adenylate kinase/UMP-CMP kinase CYD28_RS03765 IPR033690 Adenylate kinase, conserved site CYD28_RS03765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS03765 IPR007862 Adenylate kinase, active site lid domain CYD28_RS03765 IPR008144 Guanylate kinase-like domain CYD28_RS03770 IPR004368 Translation initiation factor IF-1 CYD28_RS03770 IPR022967 RNA-binding domain, S1 CYD28_RS03770 IPR006196 RNA-binding domain, S1, IF1 type CYD28_RS03770 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS03775 IPR035977 Ribosomal protein L36 superfamily CYD28_RS03775 IPR000473 Ribosomal protein L36 CYD28_RS03780 IPR010979 Ribosomal protein S13-like, H2TH CYD28_RS03780 IPR027437 30s ribosomal protein S13, C-terminal CYD28_RS03780 IPR001892 Ribosomal protein S13 CYD28_RS03780 IPR019980 Ribosomal protein S13, bacterial-type CYD28_RS03780 IPR018269 Ribosomal protein S13, conserved site CYD28_RS03785 IPR001971 Ribosomal protein S11 CYD28_RS03785 IPR019981 Ribosomal protein S11, bacterial-type CYD28_RS03785 IPR018102 Ribosomal S11, conserved site CYD28_RS03785 IPR036967 Ribosomal protein S11 superfamily CYD28_RS03790 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CYD28_RS03790 IPR036643 DNA-directed RNA polymerase, insert domain superfamily CYD28_RS03790 IPR036603 RNA polymerase, RBP11-like subunit CYD28_RS03790 IPR011260 RNA polymerase, alpha subunit, C-terminal CYD28_RS03790 IPR011773 DNA-directed RNA polymerase, alpha subunit CYD28_RS03790 IPR011262 DNA-directed RNA polymerase, insert domain CYD28_RS03795 IPR000456 Ribosomal protein L17 CYD28_RS03795 IPR036373 Ribosomal protein L17 superfamily CYD28_RS03800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS03800 IPR003593 AAA+ ATPase domain CYD28_RS03800 IPR003439 ABC transporter-like CYD28_RS03800 IPR017871 ABC transporter, conserved site CYD28_RS03800 IPR015856 ABC transporter, CbiO/EcfA subunit CYD28_RS03800 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 CYD28_RS03805 IPR015856 ABC transporter, CbiO/EcfA subunit CYD28_RS03805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS03805 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 CYD28_RS03805 IPR017871 ABC transporter, conserved site CYD28_RS03805 IPR003593 AAA+ ATPase domain CYD28_RS03805 IPR003439 ABC transporter-like CYD28_RS03810 IPR003339 ABC/ECF transporter, transmembrane component CYD28_RS03810 IPR024919 ECF transporter transmembrane protein EcfT CYD28_RS03815 IPR020095 Pseudouridine synthase I, TruA, C-terminal CYD28_RS03815 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CYD28_RS03815 IPR001406 Pseudouridine synthase I, TruA CYD28_RS03815 IPR020103 Pseudouridine synthase, catalytic domain superfamily CYD28_RS03820 IPR005822 Ribosomal protein L13 CYD28_RS03820 IPR005823 Ribosomal protein L13, bacterial-type CYD28_RS03820 IPR023563 Ribosomal protein L13, conserved site CYD28_RS03820 IPR036899 Ribosomal protein L13 superfamily CYD28_RS03825 IPR020574 Ribosomal protein S9, conserved site CYD28_RS03825 IPR023035 Ribosomal protein S9, bacterial/plastid CYD28_RS03825 IPR000754 Ribosomal protein S9 CYD28_RS03825 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS03825 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS03830 IPR026590 Sirtuin family, catalytic core domain CYD28_RS03830 IPR029035 DHS-like NAD/FAD-binding domain superfamily CYD28_RS03830 IPR026591 Sirtuin, catalytic core small domain superfamily CYD28_RS03830 IPR028628 Sirtuin, class U CYD28_RS03830 IPR003000 Sirtuin family CYD28_RS03835 IPR014036 DeoR C-terminal sensor domain CYD28_RS03835 IPR001034 DeoR-type HTH domain CYD28_RS03835 IPR037171 NagB/RpiA transferase-like CYD28_RS03835 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CYD28_RS03835 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS03835 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS03845 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily CYD28_RS03845 IPR004783 Galactose-6-phosphate isomerase subunit LacA CYD28_RS03845 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CYD28_RS03850 IPR004784 Galactose-6-phosphate isomerase subunit LacB CYD28_RS03850 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily CYD28_RS03850 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CYD28_RS03855 IPR017583 Tagatose/fructose phosphokinase CYD28_RS03855 IPR029056 Ribokinase-like CYD28_RS03855 IPR011611 Carbohydrate kinase PfkB CYD28_RS03855 IPR005926 Tagatose-6-phosphate kinase CYD28_RS03855 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CYD28_RS03860 IPR005927 Tagatose 1,6-diphosphate aldolase CYD28_RS03860 IPR002915 DeoC/FbaB/ lacD aldolase CYD28_RS03860 IPR013785 Aldolase-type TIM barrel CYD28_RS03865 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily CYD28_RS03865 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit CYD28_RS03870 IPR003352 Phosphotransferase system, EIIC CYD28_RS03870 IPR041713 PTS system lactose-specific EIICB component, IIB domain CYD28_RS03870 IPR013012 Phosphotransferase system, EIIB component, type 3 CYD28_RS03870 IPR036095 PTS system IIB component-like superfamily CYD28_RS03870 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CYD28_RS03870 IPR004501 Phosphotransferase system, EIIC component, type 3 CYD28_RS03870 IPR004801 Phosphotransferase system, lactose-specific IIC component CYD28_RS03875 IPR005928 6-phospho-beta-galactosidase CYD28_RS03875 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CYD28_RS03875 IPR017853 Glycoside hydrolase superfamily CYD28_RS03875 IPR001360 Glycoside hydrolase family 1 CYD28_RS03875 IPR018120 Glycoside hydrolase family 1, active site CYD28_RS03885 IPR019949 Luciferase family oxidoreductase, group 1 CYD28_RS03885 IPR036661 Luciferase-like domain superfamily CYD28_RS03885 IPR011251 Luciferase-like domain CYD28_RS03890 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 CYD28_RS03890 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site CYD28_RS03890 IPR036291 NAD(P)-binding domain superfamily CYD28_RS03890 IPR011032 GroES-like superfamily CYD28_RS03890 IPR013149 Alcohol dehydrogenase, C-terminal CYD28_RS03890 IPR013154 Alcohol dehydrogenase, N-terminal CYD28_RS03890 IPR020843 Polyketide synthase, enoylreductase domain CYD28_RS03895 IPR018093 BCCT transporter, conserved site CYD28_RS03895 IPR000060 BCCT transporter family CYD28_RS03910 IPR005531 Alkaline shock protein Asp23 CYD28_RS03920 IPR022770 Ferric iron reductase FhuF domain CYD28_RS03920 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CYD28_RS03920 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CYD28_RS03925 IPR036259 MFS transporter superfamily CYD28_RS03925 IPR020846 Major facilitator superfamily domain CYD28_RS03925 IPR010290 Transmembrane secretion effector CYD28_RS03930 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal CYD28_RS03930 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like CYD28_RS03930 IPR022770 Ferric iron reductase FhuF domain CYD28_RS03935 IPR029066 PLP-binding barrel CYD28_RS03935 IPR001608 Alanine racemase, N-terminal CYD28_RS03940 IPR002491 ABC transporter periplasmic binding domain CYD28_RS03945 IPR037294 ABC transporter, BtuC-like CYD28_RS03945 IPR000522 ABC transporter, permease protein, BtuC-like CYD28_RS03950 IPR000522 ABC transporter, permease protein, BtuC-like CYD28_RS03950 IPR037294 ABC transporter, BtuC-like CYD28_RS03960 IPR007138 Antibiotic biosynthesis monooxygenase domain CYD28_RS03960 IPR023953 Heme oxygenase IsdG CYD28_RS03960 IPR011008 Dimeric alpha-beta barrel CYD28_RS03970 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CYD28_RS03975 IPR002618 UDPGP family CYD28_RS03975 IPR029044 Nucleotide-diphospho-sugar transferases CYD28_RS03975 IPR039741 UDP-sugar pyrophosphorylase CYD28_RS03980 IPR004254 AdipoR/Haemolysin-III-related CYD28_RS03980 IPR005744 Hly-III CYD28_RS03985 IPR011701 Major facilitator superfamily CYD28_RS03985 IPR020846 Major facilitator superfamily domain CYD28_RS03985 IPR036259 MFS transporter superfamily CYD28_RS03990 IPR031396 Multidrug resistance efflux pump SepA CYD28_RS03995 IPR036259 MFS transporter superfamily CYD28_RS03995 IPR004638 Drug resistance transporter EmrB-like CYD28_RS03995 IPR011701 Major facilitator superfamily CYD28_RS03995 IPR020846 Major facilitator superfamily domain CYD28_RS04000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04000 IPR000808 Mrp, conserved site CYD28_RS04000 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CYD28_RS04000 IPR019591 Mrp/NBP35 ATP-binding protein CYD28_RS04005 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS04005 IPR001584 Integrase, catalytic core CYD28_RS04005 IPR012337 Ribonuclease H-like superfamily CYD28_RS04055 IPR034701 Diadenylate cyclase CdaA CYD28_RS04055 IPR003390 DNA integrity scanning protein, DisA, N-terminal CYD28_RS04055 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily CYD28_RS04055 IPR014046 Diadenylate cyclase CYD28_RS04065 IPR006352 Phosphoglucosamine mutase, bacterial type CYD28_RS04065 IPR005841 Alpha-D-phosphohexomutase superfamily CYD28_RS04065 IPR016066 Alpha-D-phosphohexomutase, conserved site CYD28_RS04065 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily CYD28_RS04065 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CYD28_RS04065 IPR005843 Alpha-D-phosphohexomutase, C-terminal CYD28_RS04065 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CYD28_RS04065 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CYD28_RS04065 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CYD28_RS04070 IPR001347 Sugar isomerase (SIS) CYD28_RS04070 IPR029055 Nucleophile aminohydrolases, N-terminal CYD28_RS04070 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CYD28_RS04070 IPR035490 GlmS/FrlB, SIS domain 2 CYD28_RS04070 IPR035466 GlmS/AgaS, SIS domain 1 CYD28_RS04070 IPR017932 Glutamine amidotransferase type 2 domain CYD28_RS04075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04075 IPR017871 ABC transporter, conserved site CYD28_RS04075 IPR003439 ABC transporter-like CYD28_RS04075 IPR003593 AAA+ ATPase domain CYD28_RS04080 IPR023214 HAD superfamily CYD28_RS04080 IPR036412 HAD-like superfamily CYD28_RS04080 IPR006379 HAD-superfamily hydrolase, subfamily IIB CYD28_RS04100 IPR027469 Cation efflux transmembrane domain superfamily CYD28_RS04100 IPR002524 Cation efflux protein CYD28_RS04100 IPR036837 Cation efflux protein, cytoplasmic domain superfamily CYD28_RS04100 IPR027470 Cation efflux protein, cytoplasmic domain CYD28_RS04105 IPR011991 ArsR-like helix-turn-helix domain CYD28_RS04105 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS04105 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS04105 IPR001845 HTH ArsR-type DNA-binding domain CYD28_RS04110 IPR016040 NAD(P)-binding domain CYD28_RS04110 IPR036291 NAD(P)-binding domain superfamily CYD28_RS04115 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form CYD28_RS04115 IPR001250 Mannose-6-phosphate isomerase, type I CYD28_RS04115 IPR014710 RmlC-like jelly roll fold CYD28_RS04115 IPR011051 RmlC-like cupin domain superfamily CYD28_RS04130 IPR012337 Ribonuclease H-like superfamily CYD28_RS04130 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS04130 IPR001584 Integrase, catalytic core CYD28_RS04140 IPR002177 DNA-binding protein Dps CYD28_RS04140 IPR012347 Ferritin-like CYD28_RS04140 IPR009078 Ferritin-like superfamily CYD28_RS04140 IPR008331 Ferritin/DPS protein domain CYD28_RS04140 IPR023188 DNA-binding protein Dps, conserved site CYD28_RS04150 IPR013785 Aldolase-type TIM barrel CYD28_RS04150 IPR028581 Deoxyribose-phosphate aldolase type I CYD28_RS04150 IPR002915 DeoC/FbaB/ lacD aldolase CYD28_RS04150 IPR011343 Deoxyribose-phosphate aldolase CYD28_RS04155 IPR017459 Glycosyl transferase family 3, N-terminal domain CYD28_RS04155 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal CYD28_RS04155 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase CYD28_RS04155 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic CYD28_RS04155 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CYD28_RS04155 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily CYD28_RS04155 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CYD28_RS04155 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site CYD28_RS04155 IPR000312 Glycosyl transferase, family 3 CYD28_RS04160 IPR017850 Alkaline-phosphatase-like, core domain superfamily CYD28_RS04160 IPR006124 Metalloenzyme CYD28_RS04160 IPR010045 Phosphopentomutase CYD28_RS04160 IPR024052 Phosphopentomutase DeoB cap domain superfamily CYD28_RS04170 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily CYD28_RS04170 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CYD28_RS04170 IPR003815 S-ribosylhomocysteinase (LuxS) CYD28_RS04190 IPR011602 Type II pantothenate kinase, bacterial CYD28_RS04190 IPR004567 Type II pantothenate kinase CYD28_RS04200 IPR007759 HB1/Asxl, restriction endonuclease HTH domain CYD28_RS04200 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily CYD28_RS04200 IPR029757 DNA-directed RNA polymerase subunit delta CYD28_RS04205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04205 IPR033828 CTP synthase GATase domain CYD28_RS04205 IPR017926 Glutamine amidotransferase CYD28_RS04205 IPR017456 CTP synthase, N-terminal CYD28_RS04205 IPR029062 Class I glutamine amidotransferase-like CYD28_RS04205 IPR004468 CTP synthase CYD28_RS04215 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 CYD28_RS04215 IPR000771 Fructose-bisphosphate aldolase, class-II CYD28_RS04215 IPR013785 Aldolase-type TIM barrel CYD28_RS04220 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CYD28_RS04220 IPR001986 Enolpyruvate transferase domain CYD28_RS04220 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CYD28_RS04220 IPR036968 Enolpyruvate transferase domain superfamily CYD28_RS04230 IPR016161 Aldehyde/histidinol dehydrogenase CYD28_RS04230 IPR016163 Aldehyde dehydrogenase, C-terminal CYD28_RS04230 IPR016162 Aldehyde dehydrogenase, N-terminal CYD28_RS04230 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CYD28_RS04230 IPR015590 Aldehyde dehydrogenase domain CYD28_RS04230 IPR016160 Aldehyde dehydrogenase, cysteine active site CYD28_RS04235 IPR011113 Rho termination factor, RNA-binding domain CYD28_RS04235 IPR003593 AAA+ ATPase domain CYD28_RS04235 IPR041703 Transcription termination factor Rho, ATP binding domain CYD28_RS04235 IPR011112 Rho termination factor, N-terminal CYD28_RS04235 IPR036269 Rho termination factor, N-terminal domain superfamily CYD28_RS04235 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CYD28_RS04235 IPR011129 Cold shock domain CYD28_RS04235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04235 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS04235 IPR004665 Transcription termination factor Rho CYD28_RS04240 IPR034704 L28p-like CYD28_RS04240 IPR002150 Ribosomal protein L31 CYD28_RS04240 IPR027493 Ribosomal protein L31 type B CYD28_RS04240 IPR042105 Ribosomal protein L31 superfamily CYD28_RS04245 IPR001267 Thymidine kinase CYD28_RS04245 IPR020633 Thymidine kinase, conserved site CYD28_RS04245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04250 IPR005139 Peptide chain release factor CYD28_RS04250 IPR004373 Peptide chain release factor 1 CYD28_RS04250 IPR000352 Peptide chain release factor class I CYD28_RS04255 IPR007848 Methyltransferase small domain CYD28_RS04255 IPR040758 Release factor glutamine methyltransferase, N-terminal domain CYD28_RS04255 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CYD28_RS04255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS04255 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CYD28_RS04255 IPR004556 Methyltransferase HemK-like CYD28_RS04260 IPR006070 YrdC-like domain CYD28_RS04260 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CYD28_RS04260 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CYD28_RS04260 IPR005145 Putative GTP-binding controlling metal-binding domain CYD28_RS04260 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily CYD28_RS04265 IPR023485 Phosphotyrosine protein phosphatase I CYD28_RS04265 IPR036196 Phosphotyrosine protein phosphatase I superfamily CYD28_RS04265 IPR017867 Protein-tyrosine phosphatase, low molecular weight CYD28_RS04270 IPR006340 Protein of unknown function DUF436 CYD28_RS04270 IPR028345 Aminoglycoside 3-N-acetyltransferase-like CYD28_RS04275 IPR039429 Serine hydroxymethyltransferase-like domain CYD28_RS04275 IPR001085 Serine hydroxymethyltransferase CYD28_RS04275 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CYD28_RS04275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS04275 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS04275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS04280 IPR005765 Uracil phosphoribosyl transferase CYD28_RS04280 IPR000836 Phosphoribosyltransferase domain CYD28_RS04280 IPR029057 Phosphoribosyltransferase-like CYD28_RS04280 IPR034332 Uracil phosphoribosyltransferase, bacterial-type CYD28_RS04285 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like CYD28_RS04285 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain CYD28_RS04295 IPR000568 ATP synthase, F0 complex, subunit A CYD28_RS04295 IPR023011 ATP synthase, F0 complex, subunit A, active site CYD28_RS04295 IPR035908 ATP synthase, F0 complex, subunit A superfamily CYD28_RS04300 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast CYD28_RS04300 IPR000454 ATP synthase, F0 complex, subunit C CYD28_RS04300 IPR035921 F/V-ATP synthase subunit C superfamily CYD28_RS04300 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site CYD28_RS04300 IPR038662 F1F0 ATP synthase subunit C superfamily CYD28_RS04300 IPR002379 V-ATPase proteolipid subunit C-like domain CYD28_RS04305 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast CYD28_RS04305 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily CYD28_RS04305 IPR005864 ATP synthase, F0 complex, subunit b, bacterial CYD28_RS04310 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily CYD28_RS04310 IPR020781 ATPase, OSCP/delta subunit, conserved site CYD28_RS04310 IPR000711 ATPase, OSCP/delta subunit CYD28_RS04315 IPR000793 ATP synthase, alpha subunit, C-terminal CYD28_RS04315 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CYD28_RS04315 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily CYD28_RS04315 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain CYD28_RS04315 IPR005294 ATP synthase, F1 complex, alpha subunit CYD28_RS04315 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CYD28_RS04315 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CYD28_RS04315 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CYD28_RS04315 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CYD28_RS04315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04320 IPR000131 ATP synthase, F1 complex, gamma subunit CYD28_RS04320 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily CYD28_RS04325 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CYD28_RS04325 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain CYD28_RS04325 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal CYD28_RS04325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04325 IPR005722 ATP synthase, F1 complex, beta subunit CYD28_RS04325 IPR003593 AAA+ ATPase domain CYD28_RS04325 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CYD28_RS04325 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily CYD28_RS04330 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily CYD28_RS04330 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CYD28_RS04330 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain CYD28_RS04330 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal CYD28_RS04330 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal CYD28_RS04340 IPR001986 Enolpyruvate transferase domain CYD28_RS04340 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CYD28_RS04340 IPR036968 Enolpyruvate transferase domain superfamily CYD28_RS04340 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CYD28_RS04345 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CYD28_RS04345 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CYD28_RS04345 IPR029069 HotDog domain superfamily CYD28_RS04355 IPR000424 Primosome PriB/single-strand DNA-binding CYD28_RS04355 IPR011344 Single-stranded DNA-binding protein CYD28_RS04355 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS04360 IPR010618 Transglycosylase-like CYD28_RS04360 IPR023346 Lysozyme-like domain superfamily CYD28_RS04365 IPR027574 Thiaminase II CYD28_RS04365 IPR016084 Haem oxygenase-like, multi-helical CYD28_RS04365 IPR004305 Thiaminase-2/PQQC CYD28_RS04370 IPR029056 Ribokinase-like CYD28_RS04370 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CYD28_RS04370 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CYD28_RS04375 IPR000417 Hydroxyethylthiazole kinase CYD28_RS04375 IPR029056 Ribokinase-like CYD28_RS04380 IPR036206 Thiamin phosphate synthase superfamily CYD28_RS04380 IPR034291 Thiamine phosphate synthase CYD28_RS04380 IPR022998 Thiamine phosphate synthase/TenI CYD28_RS04380 IPR013785 Aldolase-type TIM barrel CYD28_RS04385 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes CYD28_RS04385 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 CYD28_RS04385 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CYD28_RS04390 IPR012337 Ribonuclease H-like superfamily CYD28_RS04390 IPR001584 Integrase, catalytic core CYD28_RS04390 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS04395 IPR006674 HD domain CYD28_RS04395 IPR003607 HD/PDEase domain CYD28_RS04400 IPR030874 Cardiolipin synthase, Firmicutes-type CYD28_RS04400 IPR022924 Cardiolipin synthase CYD28_RS04400 IPR027379 Cardiolipin synthase N-terminal CYD28_RS04400 IPR025202 Phospholipase D-like domain CYD28_RS04400 IPR001736 Phospholipase D/Transphosphatidylase CYD28_RS04405 IPR003735 Metal-sensitive transcriptional repressor CYD28_RS04405 IPR038390 Metal-sensitive transcriptional repressor superfamily CYD28_RS04425 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CYD28_RS04425 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CYD28_RS04425 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB CYD28_RS04430 IPR005905 D-alanine--D-alanine ligase CYD28_RS04430 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CYD28_RS04430 IPR016185 Pre-ATP-grasp domain superfamily CYD28_RS04430 IPR011095 D-alanine--D-alanine ligase, C-terminal CYD28_RS04430 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CYD28_RS04430 IPR013815 ATP-grasp fold, subdomain 1 CYD28_RS04430 IPR011761 ATP-grasp fold CYD28_RS04435 IPR036565 Mur-like, catalytic domain superfamily CYD28_RS04435 IPR004101 Mur ligase, C-terminal CYD28_RS04435 IPR013221 Mur ligase, central CYD28_RS04435 IPR000713 Mur ligase, N-terminal catalytic domain CYD28_RS04435 IPR035911 MurE/MurF, N-terminal CYD28_RS04435 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase CYD28_RS04435 IPR036615 Mur ligase, C-terminal domain superfamily CYD28_RS04440 IPR014014 RNA helicase, DEAD-box type, Q motif CYD28_RS04440 IPR011545 DEAD/DEAH box helicase domain CYD28_RS04440 IPR030880 DEAD-box ATP-dependent RNA helicase CshA CYD28_RS04440 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYD28_RS04440 IPR001650 Helicase, C-terminal CYD28_RS04440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04440 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CYD28_RS04450 IPR005182 Domain of unknown function DUF304 CYD28_RS04450 IPR014529 Uncharacterised conserved protein UCP026631 CYD28_RS04460 IPR008278 4'-phosphopantetheinyl transferase domain CYD28_RS04460 IPR037143 4'-phosphopantetheinyl transferase domain superfamily CYD28_RS04460 IPR002582 Holo-[acyl carrier protein] synthase CYD28_RS04460 IPR004568 Phosphopantetheine-protein transferase domain CYD28_RS04465 IPR000821 Alanine racemase CYD28_RS04465 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CYD28_RS04465 IPR011079 Alanine racemase, C-terminal CYD28_RS04465 IPR001608 Alanine racemase, N-terminal CYD28_RS04465 IPR029066 PLP-binding barrel CYD28_RS04465 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CYD28_RS04470 IPR013321 Arc-type ribbon-helix-helix CYD28_RS04475 IPR003477 mRNA interferase PemK-like CYD28_RS04475 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CYD28_RS04480 IPR014787 Phosphoserine phosphatase RsbU, N-terminal CYD28_RS04480 IPR001932 PPM-type phosphatase domain CYD28_RS04480 IPR036457 PPM-type phosphatase domain superfamily CYD28_RS04480 IPR017944 KaiA/RbsU helical domain superfamily CYD28_RS04485 IPR002645 STAS domain CYD28_RS04485 IPR003658 Anti-sigma factor antagonist CYD28_RS04485 IPR036513 STAS domain superfamily CYD28_RS04490 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS04490 IPR010193 Serine-protein kinase RsbW CYD28_RS04490 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS04495 IPR014322 RNA polymerase sigma-B/F/G type CYD28_RS04495 IPR014284 RNA polymerase sigma-70 like domain CYD28_RS04495 IPR014288 RNA polymerase sigma-B factor CYD28_RS04495 IPR000943 RNA polymerase sigma-70 CYD28_RS04495 IPR007624 RNA polymerase sigma-70 region 3 CYD28_RS04495 IPR013325 RNA polymerase sigma factor, region 2 CYD28_RS04495 IPR007627 RNA polymerase sigma-70 region 2 CYD28_RS04495 IPR013324 RNA polymerase sigma factor, region 3/4-like CYD28_RS04495 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS04495 IPR007630 RNA polymerase sigma-70 region 4 CYD28_RS04500 IPR037027 YqgF/RNase H-like domain superfamily CYD28_RS04500 IPR032639 Tex protein, YqgF-like domain CYD28_RS04500 IPR006641 YqgF/RNase H-like domain CYD28_RS04500 IPR003029 S1 domain CYD28_RS04500 IPR041692 HHH domain 9 CYD28_RS04500 IPR018974 Tex-like protein, N-terminal CYD28_RS04500 IPR023319 Tex-like protein, HTH domain superfamily CYD28_RS04500 IPR023323 Tex-like domain superfamily CYD28_RS04500 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS04500 IPR012337 Ribonuclease H-like superfamily CYD28_RS04500 IPR010994 RuvA domain 2-like CYD28_RS04500 IPR022967 RNA-binding domain, S1 CYD28_RS04505 IPR006640 SprT-like CYD28_RS04505 IPR035240 SprT-like, zinc ribbon domain CYD28_RS04505 IPR023524 Uncharacterised protein family SprT-like CYD28_RS04540 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CYD28_RS04540 IPR001926 Pyridoxal-phosphate dependent enzyme CYD28_RS04540 IPR011820 L-threonine dehydratase biosynthetic IlvA CYD28_RS04540 IPR001721 Threonine dehydratase, ACT-like domain CYD28_RS04540 IPR038110 Threonine dehydratase, ACT-like domain superfamily CYD28_RS04540 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYD28_RS04545 IPR033940 3-isopropylmalate dehydratase, swivel domain CYD28_RS04545 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CYD28_RS04545 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CYD28_RS04545 IPR004431 3-isopropylmalate dehydratase, small subunit CYD28_RS04550 IPR036008 Aconitase, iron-sulfur domain CYD28_RS04550 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CYD28_RS04550 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CYD28_RS04550 IPR004430 3-isopropylmalate dehydratase, large subunit CYD28_RS04550 IPR033941 3-Isopropylmalate dehydratase, catalytic domain CYD28_RS04550 IPR018136 Aconitase family, 4Fe-4S cluster binding site CYD28_RS04555 IPR004429 Isopropylmalate dehydrogenase CYD28_RS04555 IPR024084 Isopropylmalate dehydrogenase-like domain CYD28_RS04555 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CYD28_RS04560 IPR000891 Pyruvate carboxyltransferase CYD28_RS04560 IPR005671 2-isopropylmalate synthase, bacterial-type CYD28_RS04560 IPR013785 Aldolase-type TIM barrel CYD28_RS04560 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain CYD28_RS04560 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily CYD28_RS04565 IPR036291 NAD(P)-binding domain superfamily CYD28_RS04565 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CYD28_RS04565 IPR013023 Ketol-acid reductoisomerase CYD28_RS04565 IPR000506 Ketol-acid reductoisomerase, C-terminal CYD28_RS04565 IPR014359 Ketol-acid reductoisomerase, prokaryotic CYD28_RS04565 IPR013116 Ketol-acid reductoisomerase, N-terminal CYD28_RS04570 IPR004789 Acetolactate synthase, small subunit CYD28_RS04570 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal CYD28_RS04570 IPR002912 ACT domain CYD28_RS04570 IPR019455 Acetolactate synthase, small subunit, C-terminal CYD28_RS04570 IPR039557 AHAS, ACT domain CYD28_RS04575 IPR039368 Acetolactate synthase large subunit, TPP binding domain CYD28_RS04575 IPR029035 DHS-like NAD/FAD-binding domain superfamily CYD28_RS04575 IPR012846 Acetolactate synthase, large subunit, biosynthetic CYD28_RS04575 IPR012000 Thiamine pyrophosphate enzyme, central domain CYD28_RS04575 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CYD28_RS04575 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CYD28_RS04575 IPR029061 Thiamin diphosphate-binding fold CYD28_RS04580 IPR037237 IlvD/EDD, N-terminal domain CYD28_RS04580 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CYD28_RS04580 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CYD28_RS04580 IPR004404 Dihydroxy-acid dehydratase CYD28_RS04580 IPR042096 Dihydroxy-acid dehydratase, C-terminal CYD28_RS04585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04585 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CYD28_RS04590 IPR000905 Gcp-like domain CYD28_RS04590 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB CYD28_RS04595 IPR000182 GNAT domain CYD28_RS04595 IPR006464 N-acetyltransferase RimI/Ard1 CYD28_RS04595 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS04600 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CYD28_RS04600 IPR017861 Kae1/TsaD family CYD28_RS04600 IPR000905 Gcp-like domain CYD28_RS04600 IPR017860 Peptidase M22, conserved site CYD28_RS04605 IPR017871 ABC transporter, conserved site CYD28_RS04605 IPR032524 ABC transporter Uup, C-terminal CYD28_RS04605 IPR032781 ABC-transporter extension domain CYD28_RS04605 IPR003439 ABC transporter-like CYD28_RS04605 IPR003593 AAA+ ATPase domain CYD28_RS04605 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CYD28_RS04605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04610 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS04610 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS04610 IPR022876 Redox-sensing transcriptional repressor Rex CYD28_RS04610 IPR009718 Rex DNA-binding, C-terminal domain CYD28_RS04610 IPR036291 NAD(P)-binding domain superfamily CYD28_RS04610 IPR003781 CoA-binding CYD28_RS04615 IPR007272 Sulphur transport domain CYD28_RS04620 IPR001455 TusA-like domain CYD28_RS04620 IPR036868 TusA-like domain superfamily CYD28_RS04625 IPR024041 Ammonium transporter AmtB-like domain CYD28_RS04625 IPR001905 Ammonium transporter CYD28_RS04625 IPR018047 Ammonium transporter, conserved site CYD28_RS04625 IPR029020 Ammonium/urea transporter CYD28_RS04630 IPR025997 Periplasmic binding protein CYD28_RS04630 IPR028082 Periplasmic binding protein-like I CYD28_RS04630 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CYD28_RS04630 IPR000843 LacI-type HTH domain CYD28_RS04635 IPR013148 Glycosyl hydrolase family 32, N-terminal CYD28_RS04635 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily CYD28_RS04635 IPR018053 Glycoside hydrolase, family 32, active site CYD28_RS04635 IPR013189 Glycosyl hydrolase family 32, C-terminal CYD28_RS04635 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily CYD28_RS04635 IPR006232 Sucrose-6-phosphate hydrolase CYD28_RS04635 IPR001362 Glycoside hydrolase, family 32 CYD28_RS04640 IPR029056 Ribokinase-like CYD28_RS04640 IPR011611 Carbohydrate kinase PfkB CYD28_RS04640 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CYD28_RS04645 IPR007492 LytTR DNA-binding domain CYD28_RS04645 IPR011006 CheY-like superfamily CYD28_RS04645 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS04660 IPR006741 Accessory gene regulator B CYD28_RS04665 IPR003010 Carbon-nitrogen hydrolase CYD28_RS04665 IPR036526 Carbon-nitrogen hydrolase superfamily CYD28_RS04665 IPR001110 Uncharacterised protein family UPF0012, conserved site CYD28_RS04680 IPR003675 CAAX prenyl protease 2 CYD28_RS04685 IPR037124 GroES chaperonin superfamily CYD28_RS04685 IPR011032 GroES-like superfamily CYD28_RS04685 IPR020818 GroES chaperonin family CYD28_RS04685 IPR018369 Chaperonin GroES, conserved site CYD28_RS04690 IPR027410 TCP-1-like chaperonin intermediate domain superfamily CYD28_RS04690 IPR027413 GroEL-like equatorial domain superfamily CYD28_RS04690 IPR002423 Chaperonin Cpn60/TCP-1 family CYD28_RS04690 IPR001844 Chaperonin Cpn60 CYD28_RS04690 IPR018370 Chaperonin Cpn60, conserved site CYD28_RS04690 IPR027409 GroEL-like apical domain superfamily CYD28_RS04695 IPR002104 Integrase, catalytic domain CYD28_RS04695 IPR013762 Integrase-like, catalytic domain superfamily CYD28_RS04695 IPR011010 DNA breaking-rejoining enzyme, catalytic core CYD28_RS04695 IPR010998 Integrase/recombinase, N-terminal CYD28_RS04695 IPR004107 Integrase, SAM-like, N-terminal CYD28_RS04755 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS04755 IPR000524 Transcription regulator HTH, GntR CYD28_RS04755 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS04760 IPR003593 AAA+ ATPase domain CYD28_RS04760 IPR003439 ABC transporter-like CYD28_RS04760 IPR017871 ABC transporter, conserved site CYD28_RS04760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04770 IPR017871 ABC transporter, conserved site CYD28_RS04770 IPR003593 AAA+ ATPase domain CYD28_RS04770 IPR003439 ABC transporter-like CYD28_RS04810 IPR015943 WD40/YVTN repeat-like-containing domain superfamily CYD28_RS04810 IPR019405 Lactonase, 7-bladed beta propeller CYD28_RS04810 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily CYD28_RS04815 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CYD28_RS04815 IPR016163 Aldehyde dehydrogenase, C-terminal CYD28_RS04815 IPR016160 Aldehyde dehydrogenase, cysteine active site CYD28_RS04815 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CYD28_RS04815 IPR016162 Aldehyde dehydrogenase, N-terminal CYD28_RS04815 IPR015590 Aldehyde dehydrogenase domain CYD28_RS04815 IPR016161 Aldehyde/histidinol dehydrogenase CYD28_RS04820 IPR038222 DHHA2 domain superfamily CYD28_RS04820 IPR001667 DDH domain CYD28_RS04820 IPR038763 DHH phosphoesterase superfamily CYD28_RS04820 IPR004097 DHHA2 domain CYD28_RS04820 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable CYD28_RS04825 IPR036380 Isochorismatase-like superfamily CYD28_RS04825 IPR000868 Isochorismatase-like CYD28_RS04835 IPR010952 Chorismate mutase, gammaproteobacteria CYD28_RS04835 IPR002701 Chorismate mutase II, prokaryotic-type CYD28_RS04835 IPR036263 Chorismate mutase type II superfamily CYD28_RS04835 IPR001086 Prephenate dehydratase CYD28_RS04835 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase CYD28_RS04835 IPR002912 ACT domain CYD28_RS04835 IPR036979 Chorismate mutase domain superfamily CYD28_RS04835 IPR018528 Prephenate dehydratase, conserved site CYD28_RS04840 IPR036119 Nitric oxide synthase, N-terminal domain superfamily CYD28_RS04840 IPR004030 Nitric oxide synthase, N-terminal CYD28_RS04840 IPR017142 Nitric oxide synthase, oxygenase subunit CYD28_RS04845 IPR006405 Nicotinate phosphoribosyltransferase pncB-type CYD28_RS04845 IPR007229 Nicotinate phosphoribosyltransferase family CYD28_RS04845 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain CYD28_RS04845 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain CYD28_RS04845 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase CYD28_RS04845 IPR013785 Aldolase-type TIM barrel CYD28_RS04845 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal CYD28_RS04850 IPR003694 NAD(+) synthetase CYD28_RS04850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS04850 IPR022926 NH(3)-dependent NAD(+) synthetase CYD28_RS04850 IPR022310 NAD/GMP synthase CYD28_RS04855 IPR019264 Domain of unknown function DUF2179 CYD28_RS04855 IPR022930 Protein of unknown function UPF0316 CYD28_RS04860 IPR025930 NETI protein CYD28_RS04865 IPR024083 Fumarase/histidase, N-terminal CYD28_RS04865 IPR020557 Fumarate lyase, conserved site CYD28_RS04865 IPR000362 Fumarate lyase family CYD28_RS04865 IPR022761 Fumarate lyase, N-terminal CYD28_RS04865 IPR008948 L-Aspartase-like CYD28_RS04865 IPR004769 Adenylosuccinate lyase CYD28_RS04865 IPR019468 Adenylosuccinate lyase C-terminal CYD28_RS04870 IPR000831 Trp repressor CYD28_RS04870 IPR010921 Trp repressor/replication initiator CYD28_RS04870 IPR038116 TrpR-like superfamily CYD28_RS04870 IPR013368 TrpR homologue YerC/YecD CYD28_RS04875 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase CYD28_RS04875 IPR039074 GGGP/HepGP synthase group I CYD28_RS04875 IPR038597 GGGP/HepGP synthase superfamily CYD28_RS04880 IPR000212 DNA helicase, UvrD/REP type CYD28_RS04880 IPR034739 UvrD/AddA helicase, N-terminal CYD28_RS04880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS04880 IPR014016 UvrD-like helicase, ATP-binding domain CYD28_RS04880 IPR005751 ATP-dependent DNA helicase PcrA CYD28_RS04880 IPR013986 DExx box DNA helicase domain superfamily CYD28_RS04880 IPR014017 UvrD-like DNA helicase, C-terminal CYD28_RS04885 IPR018239 NAD-dependent DNA ligase, active site CYD28_RS04885 IPR004150 NAD-dependent DNA ligase, OB-fold CYD28_RS04885 IPR010994 RuvA domain 2-like CYD28_RS04885 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type CYD28_RS04885 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CYD28_RS04885 IPR033136 NAD-dependent DNA ligase, conserved site CYD28_RS04885 IPR036420 BRCT domain superfamily CYD28_RS04885 IPR041663 DisA/LigA, helix-hairpin-helix motif CYD28_RS04885 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS04885 IPR001357 BRCT domain CYD28_RS04885 IPR013840 NAD-dependent DNA ligase, N-terminal CYD28_RS04885 IPR013839 NAD-dependent DNA ligase, adenylation CYD28_RS04885 IPR001679 NAD-dependent DNA ligase CYD28_RS04890 IPR011426 CamS sex pheromone cAM373 CYD28_RS04895 IPR038377 Sodium/glucose symporter superfamily CYD28_RS04895 IPR011851 Sodium/proline symporter CYD28_RS04895 IPR001734 Sodium/solute symporter CYD28_RS04895 IPR018212 Sodium/solute symporter, conserved site CYD28_RS04900 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C CYD28_RS04900 IPR003837 Glu-tRNAGln amidotransferase C subunit CYD28_RS04905 IPR000120 Amidase CYD28_RS04905 IPR023631 Amidase signature domain CYD28_RS04905 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CYD28_RS04905 IPR020556 Amidase, conserved site CYD28_RS04905 IPR036928 Amidase signature (AS) superfamily CYD28_RS04910 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 CYD28_RS04910 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CYD28_RS04910 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CYD28_RS04910 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 CYD28_RS04910 IPR018027 Asn/Gln amidotransferase CYD28_RS04910 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CYD28_RS04910 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E CYD28_RS04910 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like CYD28_RS04910 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CYD28_RS04915 IPR005218 Diacylglycerol/lipid kinase CYD28_RS04915 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CYD28_RS04915 IPR001206 Diacylglycerol kinase, catalytic domain CYD28_RS04915 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CYD28_RS04920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS04920 IPR002792 TRAM domain CYD28_RS04920 IPR010280 (Uracil-5)-methyltransferase family CYD28_RS04920 IPR030390 RNA methyltransferase TrmA, active site CYD28_RS04920 IPR030391 RNA methyltransferase TrmA, conserved site CYD28_RS04920 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS04930 IPR001126 UmuC domain CYD28_RS04930 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CYD28_RS04930 IPR022880 DNA polymerase IV CYD28_RS04930 IPR017961 DNA polymerase, Y-family, little finger domain CYD28_RS04940 IPR001519 Ferritin CYD28_RS04940 IPR009040 Ferritin-like diiron domain CYD28_RS04940 IPR009078 Ferritin-like superfamily CYD28_RS04940 IPR008331 Ferritin/DPS protein domain CYD28_RS04940 IPR041719 Ferritin, prokaryotic-type CYD28_RS04940 IPR012347 Ferritin-like CYD28_RS04945 IPR013564 Domain of unknown function DUF1727 CYD28_RS04945 IPR013221 Mur ligase, central CYD28_RS04945 IPR036565 Mur-like, catalytic domain superfamily CYD28_RS04950 IPR017929 CobB/CobQ glutamine amidotransferase CYD28_RS04950 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 CYD28_RS04950 IPR011698 CobB/CobQ-like glutamine amidotransferase CYD28_RS04950 IPR029062 Class I glutamine amidotransferase-like CYD28_RS04955 IPR010343 Aromatic acid exporter family member 1 CYD28_RS04960 IPR001714 Peptidase M24, methionine aminopeptidase CYD28_RS04960 IPR000994 Peptidase M24 CYD28_RS04960 IPR036005 Creatinase/aminopeptidase-like CYD28_RS04960 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CYD28_RS04965 IPR036291 NAD(P)-binding domain superfamily CYD28_RS04965 IPR020904 Short-chain dehydrogenase/reductase, conserved site CYD28_RS04965 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS04985 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS04985 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS04985 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CYD28_RS04985 IPR017202 Sensor histidine kinase LiaS/VraS CYD28_RS04990 IPR000792 Transcription regulator LuxR, C-terminal CYD28_RS04990 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS04990 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS04990 IPR011006 CheY-like superfamily CYD28_RS04995 IPR017039 Virulence factor BrkB CYD28_RS05005 IPR017867 Protein-tyrosine phosphatase, low molecular weight CYD28_RS05005 IPR023485 Phosphotyrosine protein phosphatase I CYD28_RS05005 IPR036196 Phosphotyrosine protein phosphatase I superfamily CYD28_RS05010 IPR009507 Protein of unknown function UPF0435 CYD28_RS05015 IPR000787 Peptidase M29 CYD28_RS05015 IPR035097 Peptidase M29, N-terminal CYD28_RS05020 IPR006683 Thioesterase domain CYD28_RS05020 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain CYD28_RS05020 IPR029069 HotDog domain superfamily CYD28_RS05020 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase CYD28_RS05030 IPR013785 Aldolase-type TIM barrel CYD28_RS05030 IPR007197 Radical SAM CYD28_RS05030 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB CYD28_RS05030 IPR014866 YfkB-like domain CYD28_RS05040 IPR002818 DJ-1/PfpI CYD28_RS05040 IPR006286 Deglycase PfpI CYD28_RS05040 IPR029062 Class I glutamine amidotransferase-like CYD28_RS05045 IPR022978 Monofunctional glycosyl transferase CYD28_RS05045 IPR001264 Glycosyl transferase, family 51 CYD28_RS05045 IPR023346 Lysozyme-like domain superfamily CYD28_RS05045 IPR036950 Penicillin binding protein transglycosylase domain CYD28_RS05050 IPR003783 Regulatory protein RecX CYD28_RS05050 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS05060 IPR003439 ABC transporter-like CYD28_RS05060 IPR017871 ABC transporter, conserved site CYD28_RS05060 IPR015860 ABC transporter, teichoic acids export, TagH CYD28_RS05060 IPR018392 LysM domain CYD28_RS05060 IPR036779 LysM domain superfamily CYD28_RS05060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS05060 IPR003593 AAA+ ATPase domain CYD28_RS05070 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CYD28_RS05075 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CYD28_RS05075 IPR003265 HhH-GPD domain CYD28_RS05075 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CYD28_RS05075 IPR015797 NUDIX hydrolase-like domain superfamily CYD28_RS05075 IPR005760 A/G-specific adenine glycosylase MutY CYD28_RS05075 IPR011257 DNA glycosylase CYD28_RS05075 IPR029119 MutY, C-terminal CYD28_RS05080 IPR016882 Uncharacterised protein family UPF0374 CYD28_RS05080 IPR035930 FomD-like superfamily CYD28_RS05080 IPR007295 Domain of unknown function DUF402 CYD28_RS05085 IPR039421 Type I protein exporter CYD28_RS05085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS05085 IPR017871 ABC transporter, conserved site CYD28_RS05085 IPR003439 ABC transporter-like CYD28_RS05085 IPR011527 ABC transporter type 1, transmembrane domain CYD28_RS05085 IPR036640 ABC transporter type 1, transmembrane domain superfamily CYD28_RS05085 IPR003593 AAA+ ATPase domain CYD28_RS05090 IPR010343 Aromatic acid exporter family member 1 CYD28_RS05095 IPR005814 Aminotransferase class-III CYD28_RS05095 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CYD28_RS05095 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS05095 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS05095 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS05100 IPR036249 Thioredoxin-like superfamily CYD28_RS05100 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CYD28_RS05100 IPR013766 Thioredoxin domain CYD28_RS05100 IPR024706 Peroxiredoxin, AhpC-type CYD28_RS05105 IPR036291 NAD(P)-binding domain superfamily CYD28_RS05105 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CYD28_RS05105 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CYD28_RS05105 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CYD28_RS05105 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYD28_RS05110 IPR002481 Ferric-uptake regulator CYD28_RS05110 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS05110 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS05270 IPR035906 MetI-like superfamily CYD28_RS05270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS05270 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain CYD28_RS05275 IPR003439 ABC transporter-like CYD28_RS05275 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type CYD28_RS05275 IPR003593 AAA+ ATPase domain CYD28_RS05275 IPR017871 ABC transporter, conserved site CYD28_RS05275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS05280 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYD28_RS05280 IPR013542 Domain of unknown function DUF1730 CYD28_RS05280 IPR004453 Epoxyqueuosine reductase QueG CYD28_RS05280 IPR016024 Armadillo-type fold CYD28_RS05280 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYD28_RS05280 IPR011989 Armadillo-like helical CYD28_RS05285 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYD28_RS05285 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CYD28_RS05285 IPR001537 tRNA/rRNA methyltransferase, SpoU type CYD28_RS05285 IPR029028 Alpha/beta knot methyltransferases CYD28_RS05290 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CYD28_RS05290 IPR004547 Glucosamine-6-phosphate isomerase CYD28_RS05290 IPR037171 NagB/RpiA transferase-like CYD28_RS05290 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CYD28_RS05305 IPR024083 Fumarase/histidase, N-terminal CYD28_RS05305 IPR008948 L-Aspartase-like CYD28_RS05305 IPR022761 Fumarate lyase, N-terminal CYD28_RS05305 IPR000362 Fumarate lyase family CYD28_RS05305 IPR020557 Fumarate lyase, conserved site CYD28_RS05305 IPR018951 Fumarase C, C-terminal CYD28_RS05305 IPR005677 Fumarate hydratase, class II CYD28_RS05310 IPR006225 Pseudouridine synthase, RluC/RluD CYD28_RS05310 IPR006145 Pseudouridine synthase, RsuA/RluA CYD28_RS05310 IPR002942 RNA-binding S4 domain CYD28_RS05310 IPR020103 Pseudouridine synthase, catalytic domain superfamily CYD28_RS05310 IPR036986 RNA-binding S4 domain superfamily CYD28_RS05310 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CYD28_RS05315 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CYD28_RS05315 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS05315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS05315 IPR003018 GAF domain CYD28_RS05315 IPR029016 GAF-like domain superfamily CYD28_RS05320 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS05320 IPR011006 CheY-like superfamily CYD28_RS05320 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS05320 IPR000792 Transcription regulator LuxR, C-terminal CYD28_RS05330 IPR007383 Protein of unknown function DUF445 CYD28_RS05330 IPR016991 Protein of unknown function UCP032178 CYD28_RS05335 IPR023378 YheA/YmcA-like domain superfamily CYD28_RS05335 IPR010368 Control of competence regulator ComK, YlbF/YmcA CYD28_RS05345 IPR038734 Uncharacterized protein YhaN, AAA domain CYD28_RS05345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS05350 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CYD28_RS05350 IPR020873 3'-5' exoribonuclease YhaM CYD28_RS05350 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS05350 IPR006674 HD domain CYD28_RS05350 IPR003607 HD/PDEase domain CYD28_RS05355 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CYD28_RS05355 IPR023059 Foldase protein PrsA CYD28_RS05355 IPR027304 Trigger factor/SurA domain superfamily CYD28_RS05370 IPR036265 HIT-like superfamily CYD28_RS05370 IPR039384 HINT family CYD28_RS05370 IPR019808 Histidine triad, conserved site CYD28_RS05370 IPR001310 Histidine triad (HIT) protein CYD28_RS05370 IPR011146 HIT-like domain CYD28_RS05375 IPR003593 AAA+ ATPase domain CYD28_RS05375 IPR003439 ABC transporter-like CYD28_RS05375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS05380 IPR010288 Bacterial ABC transporter EcsB CYD28_RS05395 IPR007138 Antibiotic biosynthesis monooxygenase domain CYD28_RS05395 IPR011008 Dimeric alpha-beta barrel CYD28_RS05400 IPR038071 UROD/MetE-like superfamily CYD28_RS05400 IPR006361 Uroporphyrinogen decarboxylase HemE CYD28_RS05400 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CYD28_RS05420 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS05420 IPR001584 Integrase, catalytic core CYD28_RS05420 IPR012337 Ribonuclease H-like superfamily CYD28_RS05465 IPR010192 2-succinylbenzoate--CoA ligase CYD28_RS05465 IPR042099 AMP-dependent synthetase-like superfamily CYD28_RS05465 IPR000873 AMP-dependent synthetase/ligase CYD28_RS05465 IPR025110 AMP-binding enzyme, C-terminal domain CYD28_RS05475 IPR002696 Putative membrane protein insertion efficiency factor CYD28_RS05480 IPR020476 NUDIX hydrolase CYD28_RS05480 IPR015797 NUDIX hydrolase-like domain superfamily CYD28_RS05480 IPR020084 NUDIX hydrolase, conserved site CYD28_RS05480 IPR000086 NUDIX hydrolase domain CYD28_RS05480 IPR022927 RNA pyrophosphohydrolase RppH CYD28_RS05485 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain CYD28_RS05485 IPR029058 Alpha/Beta hydrolase fold CYD28_RS05485 IPR002471 Peptidase S9, serine active site CYD28_RS05490 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site CYD28_RS05490 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal CYD28_RS05490 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal CYD28_RS05490 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising CYD28_RS05495 IPR022629 S-adenosylmethionine synthetase, central domain CYD28_RS05495 IPR022636 S-adenosylmethionine synthetase superfamily CYD28_RS05495 IPR022628 S-adenosylmethionine synthetase, N-terminal CYD28_RS05495 IPR002133 S-adenosylmethionine synthetase CYD28_RS05495 IPR022631 S-adenosylmethionine synthetase, conserved site CYD28_RS05495 IPR022630 S-adenosylmethionine synthetase, C-terminal CYD28_RS05505 IPR020471 Aldo/keto reductase CYD28_RS05505 IPR018170 Aldo/keto reductase, conserved site CYD28_RS05505 IPR023210 NADP-dependent oxidoreductase domain CYD28_RS05505 IPR036812 NADP-dependent oxidoreductase domain superfamily CYD28_RS05510 IPR003691 Putative fluoride ion transporter CrcB CYD28_RS05515 IPR003691 Putative fluoride ion transporter CrcB CYD28_RS05525 IPR013785 Aldolase-type TIM barrel CYD28_RS05525 IPR001585 Transaldolase/Fructose-6-phosphate aldolase CYD28_RS05525 IPR018225 Transaldolase, active site CYD28_RS05525 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial CYD28_RS05525 IPR022999 Transaldolase type 3B, putative CYD28_RS05525 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase CYD28_RS05540 IPR014284 RNA polymerase sigma-70 like domain CYD28_RS05540 IPR007627 RNA polymerase sigma-70 region 2 CYD28_RS05540 IPR013325 RNA polymerase sigma factor, region 2 CYD28_RS05540 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS05540 IPR000792 Transcription regulator LuxR, C-terminal CYD28_RS05540 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS05550 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CYD28_RS05550 IPR038200 GW domain superfamily CYD28_RS05550 IPR025987 GW domain CYD28_RS05550 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CYD28_RS05550 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CYD28_RS05555 IPR001584 Integrase, catalytic core CYD28_RS05555 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS05555 IPR012337 Ribonuclease H-like superfamily CYD28_RS05565 IPR016193 Cytidine deaminase-like CYD28_RS05565 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CYD28_RS05565 IPR002125 Cytidine and deoxycytidylate deaminase domain CYD28_RS05565 IPR011549 Riboflavin-specific deaminase, C-terminal CYD28_RS05565 IPR004794 Riboflavin biosynthesis protein RibD CYD28_RS05565 IPR024072 Dihydrofolate reductase-like domain superfamily CYD28_RS05565 IPR016192 APOBEC/CMP deaminase, zinc-binding CYD28_RS05570 IPR017938 Riboflavin synthase-like beta-barrel CYD28_RS05570 IPR026017 Lumazine-binding domain CYD28_RS05570 IPR001783 Lumazine-binding protein CYD28_RS05570 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily CYD28_RS05575 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CYD28_RS05575 IPR016299 Riboflavin biosynthesis protein RibBA CYD28_RS05575 IPR036144 RibA-like superfamily CYD28_RS05575 IPR000926 GTP cyclohydrolase II, RibA CYD28_RS05575 IPR032677 GTP cyclohydrolase II CYD28_RS05575 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily CYD28_RS05580 IPR002180 Lumazine/riboflavin synthase CYD28_RS05580 IPR034964 Lumazine synthase CYD28_RS05580 IPR036467 Lumazine/riboflavin synthase superfamily CYD28_RS05585 IPR008219 Proline dehydrogenase, bacteria and archaea CYD28_RS05585 IPR015659 Proline oxidase family CYD28_RS05585 IPR029041 FAD-linked oxidoreductase-like CYD28_RS05585 IPR002872 Proline dehydrogenase domain CYD28_RS05590 IPR022742 Serine aminopeptidase, S33 CYD28_RS05590 IPR000073 Alpha/beta hydrolase fold-1 CYD28_RS05590 IPR029058 Alpha/Beta hydrolase fold CYD28_RS05600 IPR001207 Transposase, mutator type CYD28_RS05605 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS05605 IPR000835 MarR-type HTH domain CYD28_RS05605 IPR010166 Transcriptional regulator SarA/Rot CYD28_RS05605 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS05605 IPR016998 HTH-type transcriptional regulator Rot CYD28_RS05610 IPR010719 Putative rRNA methylase CYD28_RS05610 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS05615 IPR039661 ELP3/YhcC CYD28_RS05615 IPR005911 Protein YhcC-like CYD28_RS05615 IPR023404 Radical SAM, alpha/beta horseshoe CYD28_RS05615 IPR007197 Radical SAM CYD28_RS05615 IPR032432 Radical SAM, C-terminal extension CYD28_RS05615 IPR006638 Elp3/MiaB/NifB CYD28_RS05620 IPR011701 Major facilitator superfamily CYD28_RS05620 IPR036259 MFS transporter superfamily CYD28_RS05620 IPR020846 Major facilitator superfamily domain CYD28_RS05625 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CYD28_RS05625 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CYD28_RS05625 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CYD28_RS05625 IPR002300 Aminoacyl-tRNA synthetase, class Ia CYD28_RS05625 IPR025709 Leucyl-tRNA synthetase, editing domain CYD28_RS05625 IPR002302 Leucine-tRNA ligase CYD28_RS05625 IPR015413 Methionyl/Leucyl tRNA synthetase CYD28_RS05625 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CYD28_RS05625 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS05635 IPR009063 Immunoglobulin/albumin-binding domain superfamily CYD28_RS05635 IPR026361 Extracellular matrix-binding protein Ebh domain CYD28_RS05635 IPR005877 YSIRK Gram-positive signal peptide CYD28_RS05635 IPR002988 Protein G-related albumin-binding (GA) module CYD28_RS05635 IPR020840 Extracellular matrix-binding protein ebh, GA module CYD28_RS05645 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like CYD28_RS05645 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS05645 IPR023166 HI0933-like insert domain superfamily CYD28_RS05650 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CYD28_RS05650 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type CYD28_RS05650 IPR002797 Polysaccharide biosynthesis protein CYD28_RS05655 IPR006145 Pseudouridine synthase, RsuA/RluA CYD28_RS05655 IPR020103 Pseudouridine synthase, catalytic domain superfamily CYD28_RS05655 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CYD28_RS05655 IPR002942 RNA-binding S4 domain CYD28_RS05655 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain CYD28_RS05655 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CYD28_RS05655 IPR036986 RNA-binding S4 domain superfamily CYD28_RS05665 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS05665 IPR010964 Peptidase M20A, peptidase V-related CYD28_RS05665 IPR002933 Peptidase M20 CYD28_RS05670 IPR018300 Aminotransferase, class IV, conserved site CYD28_RS05670 IPR036038 Aminotransferase-like, PLP-dependent enzymes CYD28_RS05670 IPR005784 D-amino acid aminotransferase CYD28_RS05670 IPR001544 Aminotransferase class IV CYD28_RS05675 IPR011009 Protein kinase-like domain superfamily CYD28_RS05675 IPR002575 Aminoglycoside phosphotransferase CYD28_RS05680 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type CYD28_RS05680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS05685 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS05685 IPR001584 Integrase, catalytic core CYD28_RS05685 IPR012337 Ribonuclease H-like superfamily CYD28_RS05690 IPR001279 Metallo-beta-lactamase CYD28_RS05690 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CYD28_RS05700 IPR023367 Peptidase M42, domain 2 CYD28_RS05700 IPR008007 Peptidase M42 CYD28_RS05705 IPR036249 Thioredoxin-like superfamily CYD28_RS05705 IPR013766 Thioredoxin domain CYD28_RS05710 IPR010838 Protein of unknown unction DUF1444 CYD28_RS05715 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS05715 IPR002547 tRNA-binding domain CYD28_RS05715 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CYD28_RS05715 IPR037154 YtpR-like superfamily CYD28_RS05715 IPR027855 Domain of unknown function DUF4479 CYD28_RS05720 IPR018541 FtsK gamma domain CYD28_RS05720 IPR002543 FtsK domain CYD28_RS05720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS05720 IPR041027 FtsK alpha domain CYD28_RS05720 IPR003593 AAA+ ATPase domain CYD28_RS05720 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS05720 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS05725 IPR036615 Mur ligase, C-terminal domain superfamily CYD28_RS05725 IPR004101 Mur ligase, C-terminal CYD28_RS05725 IPR000713 Mur ligase, N-terminal catalytic domain CYD28_RS05725 IPR005758 UDP-N-acetylmuramate--L-alanine ligase CYD28_RS05725 IPR013221 Mur ligase, central CYD28_RS05725 IPR036565 Mur-like, catalytic domain superfamily CYD28_RS05730 IPR009293 Uncharacterised protein family UPF0478 CYD28_RS05740 IPR036979 Chorismate mutase domain superfamily CYD28_RS05740 IPR013785 Aldolase-type TIM barrel CYD28_RS05740 IPR010954 Chorismate mutase, Firmicutes/Deinococcus CYD28_RS05740 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 CYD28_RS05740 IPR006218 DAHP synthetase I/KDSA CYD28_RS05740 IPR002701 Chorismate mutase II, prokaryotic-type CYD28_RS05745 IPR028082 Periplasmic binding protein-like I CYD28_RS05745 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CYD28_RS05745 IPR000843 LacI-type HTH domain CYD28_RS05745 IPR006377 Catabolite control protein A CYD28_RS05750 IPR023801 Histone deacetylase domain CYD28_RS05750 IPR003085 Acetoin utilization protein AcuC CYD28_RS05750 IPR023696 Ureohydrolase domain superfamily CYD28_RS05750 IPR000286 Histone deacetylase family CYD28_RS05750 IPR037138 Histone deacetylase domain superfamily CYD28_RS05755 IPR000182 GNAT domain CYD28_RS05755 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS05755 IPR024699 Acetoin utilization protein AcuA CYD28_RS05760 IPR025110 AMP-binding enzyme, C-terminal domain CYD28_RS05760 IPR020845 AMP-binding, conserved site CYD28_RS05760 IPR000873 AMP-dependent synthetase/ligase CYD28_RS05760 IPR042099 AMP-dependent synthetase-like superfamily CYD28_RS05775 IPR017925 Dihydrofolate reductase conserved site CYD28_RS05775 IPR001796 Dihydrofolate reductase domain CYD28_RS05775 IPR024072 Dihydrofolate reductase-like domain superfamily CYD28_RS05775 IPR012259 Dihydrofolate reductase CYD28_RS05780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS05780 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site CYD28_RS05780 IPR000559 Formate-tetrahydrofolate ligase, FTHFS CYD28_RS05785 IPR023346 Lysozyme-like domain superfamily CYD28_RS05785 IPR001460 Penicillin-binding protein, transpeptidase CYD28_RS05785 IPR001264 Glycosyl transferase, family 51 CYD28_RS05785 IPR036950 Penicillin binding protein transglycosylase domain CYD28_RS05785 IPR012338 Beta-lactamase/transpeptidase-like CYD28_RS05790 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CYD28_RS05790 IPR002305 Aminoacyl-tRNA synthetase, class Ic CYD28_RS05790 IPR024088 Tyrosine-tRNA ligase, bacterial-type CYD28_RS05790 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 CYD28_RS05790 IPR002307 Tyrosine-tRNA ligase CYD28_RS05790 IPR036986 RNA-binding S4 domain superfamily CYD28_RS05790 IPR002942 RNA-binding S4 domain CYD28_RS05790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS05800 IPR036259 MFS transporter superfamily CYD28_RS05800 IPR004638 Drug resistance transporter EmrB-like CYD28_RS05800 IPR020846 Major facilitator superfamily domain CYD28_RS05800 IPR011701 Major facilitator superfamily CYD28_RS05805 IPR009003 Peptidase S1, PA clan CYD28_RS05805 IPR036034 PDZ superfamily CYD28_RS05805 IPR001940 Peptidase S1C CYD28_RS05805 IPR001478 PDZ domain CYD28_RS05810 IPR002123 Phospholipid/glycerol acyltransferase CYD28_RS05810 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CYD28_RS05815 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CYD28_RS05815 IPR003352 Phosphotransferase system, EIIC CYD28_RS05815 IPR036878 Glucose permease domain IIB CYD28_RS05815 IPR001996 Phosphotransferase system, IIB component, type 1 CYD28_RS05815 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component CYD28_RS05815 IPR013013 Phosphotransferase system, EIIC component, type 1 CYD28_RS05825 IPR002912 ACT domain CYD28_RS05825 IPR029009 Allosteric substrate binding domain superfamily CYD28_RS05825 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYD28_RS05825 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CYD28_RS05825 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CYD28_RS05825 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CYD28_RS05825 IPR006236 D-3-phosphoglycerate dehydrogenase CYD28_RS05825 IPR036291 NAD(P)-binding domain superfamily CYD28_RS05830 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS05830 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CYD28_RS05830 IPR000192 Aminotransferase class V domain CYD28_RS05830 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS05830 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS05830 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CYD28_RS05835 IPR036102 OsmC/Ohr superfamily CYD28_RS05835 IPR003718 OsmC/Ohr family CYD28_RS05835 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes CYD28_RS05835 IPR015946 K homology domain-like, alpha/beta CYD28_RS05840 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CYD28_RS05840 IPR030395 Glycerophosphodiester phosphodiesterase domain CYD28_RS05845 IPR001912 Ribosomal protein S4/S9, N-terminal CYD28_RS05845 IPR036986 RNA-binding S4 domain superfamily CYD28_RS05845 IPR002942 RNA-binding S4 domain CYD28_RS05845 IPR018079 Ribosomal protein S4, conserved site CYD28_RS05845 IPR005709 Ribosomal protein S4, bacterial-type CYD28_RS05845 IPR022801 Ribosomal protein S4/S9 CYD28_RS05855 IPR000614 Free Met sulfoxide reductase conserved site CYD28_RS05855 IPR003018 GAF domain CYD28_RS05855 IPR029016 GAF-like domain superfamily CYD28_RS05860 IPR010379 Septation ring formation regulator EzrA CYD28_RS05865 IPR000192 Aminotransferase class V domain CYD28_RS05865 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CYD28_RS05865 IPR016454 Cysteine desulfurase CYD28_RS05865 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS05865 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS05865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS05870 IPR004114 THUMP domain CYD28_RS05870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS05870 IPR020536 Thil, AANH domain CYD28_RS05870 IPR003720 tRNA sulfurtransferase ThiI CYD28_RS05875 IPR002781 Transmembrane protein TauE-like CYD28_RS05880 IPR013740 Redoxin CYD28_RS05880 IPR036249 Thioredoxin-like superfamily CYD28_RS05880 IPR013766 Thioredoxin domain CYD28_RS05880 IPR002065 Thiol peroxidase Tpx CYD28_RS05880 IPR018219 Thiol peroxidase conserved site CYD28_RS05885 IPR003356 DNA methylase, adenine-specific CYD28_RS05885 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted CYD28_RS05885 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS05890 IPR023865 Aliphatic acid kinase, short-chain, conserved site CYD28_RS05890 IPR000890 Aliphatic acid kinase, short-chain CYD28_RS05890 IPR004372 Acetate/propionate kinase CYD28_RS05895 IPR006015 Universal stress protein A family CYD28_RS05895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS05895 IPR006016 UspA CYD28_RS05900 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 CYD28_RS05900 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CYD28_RS05900 IPR036291 NAD(P)-binding domain superfamily CYD28_RS05900 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 CYD28_RS05900 IPR008141 Alanine dehydrogenase CYD28_RS05900 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CYD28_RS05905 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CYD28_RS05905 IPR000587 Creatinase, N-terminal CYD28_RS05905 IPR036005 Creatinase/aminopeptidase-like CYD28_RS05905 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CYD28_RS05905 IPR000994 Peptidase M24 CYD28_RS05910 IPR022877 Protein of unknown funcion UPF0173 CYD28_RS05910 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CYD28_RS05910 IPR001279 Metallo-beta-lactamase CYD28_RS05920 IPR000524 Transcription regulator HTH, GntR CYD28_RS05920 IPR006683 Thioesterase domain CYD28_RS05920 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CYD28_RS05920 IPR029069 HotDog domain superfamily CYD28_RS05920 IPR000644 CBS domain CYD28_RS05920 IPR010766 DRTGG CYD28_RS05920 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS05920 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS05925 IPR003156 DHHA1 domain CYD28_RS05925 IPR001667 DDH domain CYD28_RS05925 IPR038763 DHH phosphoesterase superfamily CYD28_RS05930 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CYD28_RS05930 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain CYD28_RS05930 IPR040982 DNA polymerase III alpha subunit finger domain CYD28_RS05930 IPR029460 DNA polymerase, helix-hairpin-helix motif CYD28_RS05930 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CYD28_RS05930 IPR004805 DNA polymerase III, alpha subunit CYD28_RS05930 IPR016195 Polymerase/histidinol phosphatase-like CYD28_RS05930 IPR003141 Polymerase/histidinol phosphatase, N-terminal CYD28_RS05930 IPR004013 PHP domain CYD28_RS05935 IPR036291 NAD(P)-binding domain superfamily CYD28_RS05935 IPR001891 Malic oxidoreductase CYD28_RS05935 IPR012301 Malic enzyme, N-terminal domain CYD28_RS05935 IPR015884 Malic enzyme, conserved site CYD28_RS05935 IPR037062 Malic enzyme, N-terminal domain superfamily CYD28_RS05935 IPR012302 Malic enzyme, NAD-binding CYD28_RS05940 IPR041010 Acetyl-coA carboxylase zinc finger domain CYD28_RS05940 IPR029045 ClpP/crotonase-like domain superfamily CYD28_RS05940 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CYD28_RS05940 IPR034733 Acetyl-CoA carboxylase CYD28_RS05940 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal CYD28_RS05945 IPR001095 Acetyl-CoA carboxylase, alpha subunit CYD28_RS05945 IPR029045 ClpP/crotonase-like domain superfamily CYD28_RS05945 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal CYD28_RS05950 IPR015912 Phosphofructokinase, conserved site CYD28_RS05950 IPR000023 Phosphofructokinase domain CYD28_RS05950 IPR022953 ATP-dependent 6-phosphofructokinase CYD28_RS05950 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic CYD28_RS05950 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type CYD28_RS05950 IPR035966 Phosphofructokinase superfamily CYD28_RS05955 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CYD28_RS05955 IPR015793 Pyruvate kinase, barrel CYD28_RS05955 IPR015795 Pyruvate kinase, C-terminal CYD28_RS05955 IPR036918 Pyruvate kinase, C-terminal domain superfamily CYD28_RS05955 IPR008279 PEP-utilising enzyme, mobile domain CYD28_RS05955 IPR015806 Pyruvate kinase, insert domain superfamily CYD28_RS05955 IPR040442 Pyruvate kinase-like domain superfamily CYD28_RS05955 IPR011037 Pyruvate kinase-like, insert domain superfamily CYD28_RS05955 IPR036637 Phosphohistidine domain superfamily CYD28_RS05955 IPR001697 Pyruvate kinase CYD28_RS05960 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CYD28_RS05960 IPR013785 Aldolase-type TIM barrel CYD28_RS05960 IPR018517 tRNA-dihydrouridine synthase, conserved site CYD28_RS05960 IPR001269 tRNA-dihydrouridine synthase CYD28_RS05960 IPR035587 DUS-like, FMN-binding domain CYD28_RS05965 IPR004841 Amino acid permease/ SLC12A domain CYD28_RS05965 IPR004840 Amino acid permease, conserved site CYD28_RS05970 IPR024176 Citrate synthase, bacterial-type CYD28_RS05970 IPR019810 Citrate synthase active site CYD28_RS05970 IPR011278 2-methylcitrate synthase/citrate synthase type I CYD28_RS05970 IPR016142 Citrate synthase-like, large alpha subdomain CYD28_RS05970 IPR036969 Citrate synthase superfamily CYD28_RS05970 IPR016143 Citrate synthase-like, small alpha subdomain CYD28_RS05970 IPR002020 Citrate synthase CYD28_RS05975 IPR024084 Isopropylmalate dehydrogenase-like domain CYD28_RS05975 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic CYD28_RS05975 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CYD28_RS05980 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS05980 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS05980 IPR039420 Transcriptional regulatory protein WalR-like CYD28_RS05980 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS05980 IPR011006 CheY-like superfamily CYD28_RS05980 IPR001867 OmpR/PhoB-type DNA-binding domain CYD28_RS05985 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CYD28_RS05985 IPR000014 PAS domain CYD28_RS05985 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CYD28_RS05985 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CYD28_RS05985 IPR035965 PAS domain superfamily CYD28_RS05985 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS05985 IPR031967 PhoR, single Cache-like domain CYD28_RS05985 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS05985 IPR005467 Histidine kinase domain CYD28_RS05985 IPR013767 PAS fold CYD28_RS05990 IPR002298 DNA polymerase A CYD28_RS05990 IPR018320 DNA polymerase 1 CYD28_RS05990 IPR002562 3'-5' exonuclease domain CYD28_RS05990 IPR008918 Helix-hairpin-helix motif, class 2 CYD28_RS05990 IPR020045 DNA polymerase I-like, H3TH domain CYD28_RS05990 IPR001098 DNA-directed DNA polymerase, family A, palm domain CYD28_RS05990 IPR036397 Ribonuclease H superfamily CYD28_RS05990 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CYD28_RS05990 IPR019760 DNA-directed DNA polymerase, family A, conserved site CYD28_RS05990 IPR012337 Ribonuclease H-like superfamily CYD28_RS05990 IPR002421 5'-3' exonuclease, N-terminal CYD28_RS05990 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CYD28_RS05990 IPR029060 PIN-like domain superfamily CYD28_RS05995 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site CYD28_RS05995 IPR020629 Formamidopyrimidine-DNA glycosylase CYD28_RS05995 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain CYD28_RS05995 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding CYD28_RS05995 IPR035937 MutM-like, N-terminal CYD28_RS05995 IPR010979 Ribosomal protein S13-like, H2TH CYD28_RS05995 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type CYD28_RS05995 IPR010663 Zinc finger, FPG/IleRS-type CYD28_RS06000 IPR001977 Dephospho-CoA kinase CYD28_RS06000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06005 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CYD28_RS06005 IPR036291 NAD(P)-binding domain superfamily CYD28_RS06005 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CYD28_RS06005 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CYD28_RS06005 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CYD28_RS06005 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CYD28_RS06010 IPR003796 Ribonucleotide reductase regulator NrdR-like CYD28_RS06010 IPR005144 ATP-cone domain CYD28_RS06020 IPR003593 AAA+ ATPase domain CYD28_RS06020 IPR009928 Primosomal DnaI, N-terminal CYD28_RS06020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06020 IPR002611 IstB-like ATP-binding protein CYD28_RS06025 IPR036621 Anticodon-binding domain superfamily CYD28_RS06025 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CYD28_RS06025 IPR033728 Threonine-tRNA ligase catalytic core domain CYD28_RS06025 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CYD28_RS06025 IPR002320 Threonine-tRNA ligase, class IIa CYD28_RS06025 IPR012675 Beta-grasp domain superfamily CYD28_RS06025 IPR004154 Anticodon-binding CYD28_RS06025 IPR012676 TGS-like CYD28_RS06025 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CYD28_RS06025 IPR004095 TGS CYD28_RS06025 IPR006195 Aminoacyl-tRNA synthetase, class II CYD28_RS06030 IPR004841 Amino acid permease/ SLC12A domain CYD28_RS06035 IPR019814 Translation initiation factor 3, N-terminal CYD28_RS06035 IPR019815 Translation initiation factor 3, C-terminal CYD28_RS06035 IPR001288 Translation initiation factor 3 CYD28_RS06035 IPR019813 Translation initiation factor 3, conserved site CYD28_RS06035 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily CYD28_RS06035 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily CYD28_RS06040 IPR001706 Ribosomal protein L35, non-mitochondrial CYD28_RS06040 IPR021137 Ribosomal protein L35 CYD28_RS06040 IPR037229 Ribosomal protein L35 superfamily CYD28_RS06040 IPR018265 Ribosomal protein L35, conserved site CYD28_RS06045 IPR035566 Ribosomal protein L20, C-terminal CYD28_RS06045 IPR005813 Ribosomal protein L20 CYD28_RS06050 IPR015797 NUDIX hydrolase-like domain superfamily CYD28_RS06060 IPR008881 Trigger factor, ribosome-binding, bacterial CYD28_RS06060 IPR036611 Trigger factor ribosome-binding domain superfamily CYD28_RS06060 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CYD28_RS06060 IPR005215 Trigger factor CYD28_RS06060 IPR008880 Trigger factor, C-terminal CYD28_RS06060 IPR037041 Trigger factor, C-terminal domain superfamily CYD28_RS06060 IPR027304 Trigger factor/SurA domain superfamily CYD28_RS06065 IPR019489 Clp ATPase, C-terminal CYD28_RS06065 IPR004487 Clp protease, ATP-binding subunit ClpX CYD28_RS06065 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06065 IPR010603 Zinc finger, ClpX C4-type CYD28_RS06065 IPR038366 Zinc finger, ClpX C4-type superfamily CYD28_RS06065 IPR003593 AAA+ ATPase domain CYD28_RS06065 IPR003959 ATPase, AAA-type, core CYD28_RS06070 IPR001584 Integrase, catalytic core CYD28_RS06070 IPR012337 Ribonuclease H-like superfamily CYD28_RS06070 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS06075 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06075 IPR006073 GTP binding domain CYD28_RS06075 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CYD28_RS06075 IPR030393 EngB-type guanine nucleotide-binding (G) domain CYD28_RS06080 IPR018214 Glutamyl-tRNA reductase, conserved site CYD28_RS06080 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain CYD28_RS06080 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily CYD28_RS06080 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase CYD28_RS06080 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily CYD28_RS06080 IPR036291 NAD(P)-binding domain superfamily CYD28_RS06080 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal CYD28_RS06080 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CYD28_RS06085 IPR002541 Cytochrome c assembly protein CYD28_RS06090 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site CYD28_RS06090 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily CYD28_RS06090 IPR022418 Porphobilinogen deaminase, C-terminal CYD28_RS06090 IPR022417 Porphobilinogen deaminase, N-terminal CYD28_RS06090 IPR000860 Porphobilinogen deaminase CYD28_RS06100 IPR013785 Aldolase-type TIM barrel CYD28_RS06100 IPR030656 Delta-aminolevulinic acid dehydratase, active site CYD28_RS06100 IPR001731 Delta-aminolevulinic acid dehydratase CYD28_RS06105 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS06105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS06105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS06105 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase CYD28_RS06105 IPR005814 Aminotransferase class-III CYD28_RS06115 IPR005019 Methyladenine glycosylase CYD28_RS06115 IPR004597 DNA-3-methyladenine glycosylase I CYD28_RS06115 IPR011257 DNA glycosylase CYD28_RS06120 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CYD28_RS06120 IPR033705 Valyl tRNA synthetase, anticodon-binding domain CYD28_RS06120 IPR002300 Aminoacyl-tRNA synthetase, class Ia CYD28_RS06120 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CYD28_RS06120 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CYD28_RS06120 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CYD28_RS06120 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CYD28_RS06120 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CYD28_RS06120 IPR002303 Valine-tRNA ligase CYD28_RS06120 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS06120 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CYD28_RS06125 IPR001645 Folylpolyglutamate synthetase CYD28_RS06125 IPR018109 Folylpolyglutamate synthetase, conserved site CYD28_RS06125 IPR004101 Mur ligase, C-terminal CYD28_RS06125 IPR036615 Mur ligase, C-terminal domain superfamily CYD28_RS06125 IPR013221 Mur ligase, central CYD28_RS06125 IPR036565 Mur-like, catalytic domain superfamily CYD28_RS06135 IPR037518 MPN domain CYD28_RS06135 IPR010994 RuvA domain 2-like CYD28_RS06135 IPR001405 Uncharacterised protein family UPF0758 CYD28_RS06135 IPR020891 Uncharacterised protein family UPF0758, conserved site CYD28_RS06135 IPR025657 RadC-like JAB domain CYD28_RS06160 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 CYD28_RS06160 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 CYD28_RS06160 IPR007221 Rod shape-determining protein MreC CYD28_RS06170 IPR036164 L21-like superfamily CYD28_RS06170 IPR028909 Ribosomal protein L21-like CYD28_RS06170 IPR001787 Ribosomal protein L21 CYD28_RS06175 IPR007422 Cysteine protease Prp CYD28_RS06175 IPR036764 Cysteine protease Prp superfamily CYD28_RS06180 IPR018261 Ribosomal protein L27, conserved site CYD28_RS06180 IPR001684 Ribosomal protein L27 CYD28_RS06185 IPR006073 GTP binding domain CYD28_RS06185 IPR031167 OBG-type guanine nucleotide-binding (G) domain CYD28_RS06185 IPR036726 GTP1/OBG domain superfamily CYD28_RS06185 IPR006169 GTP1/OBG domain CYD28_RS06185 IPR015349 GTP-binding protein OBG, C-terminal CYD28_RS06185 IPR014100 GTP-binding protein Obg/CgtA CYD28_RS06185 IPR006074 GTP1/OBG, conserved site CYD28_RS06185 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily CYD28_RS06185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06190 IPR008310 UPF0735 ACT domain-containing protein CYD28_RS06190 IPR002912 ACT domain CYD28_RS06195 IPR011114 Holliday junction DNA helicase RuvA, C-terminal CYD28_RS06195 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CYD28_RS06195 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS06195 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CYD28_RS06195 IPR010994 RuvA domain 2-like CYD28_RS06195 IPR000085 Bacterial DNA recombination protein RuvA CYD28_RS06195 IPR036267 RuvA, C-terminal domain superfamily CYD28_RS06200 IPR041445 RuvB, AAA lid domain CYD28_RS06200 IPR004605 DNA helicase, Holliday junction RuvB-type CYD28_RS06200 IPR003593 AAA+ ATPase domain CYD28_RS06200 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS06200 IPR008823 RuvB C-terminal winged helix domain CYD28_RS06200 IPR008824 RuvB-like P-loop domain CYD28_RS06200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06200 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS06205 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily CYD28_RS06205 IPR042119 QueA, domain 2 CYD28_RS06205 IPR042118 QueA, domain 1 CYD28_RS06205 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CYD28_RS06210 IPR002616 tRNA-guanine(15) transglycosylase-like CYD28_RS06210 IPR036511 Queuine tRNA-ribosyltransferase-like CYD28_RS06210 IPR004803 tRNA-guanine transglycosylase CYD28_RS06215 IPR003849 Preprotein translocase YajC CYD28_RS06220 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CYD28_RS06220 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CYD28_RS06220 IPR005791 Protein translocase subunit SecD CYD28_RS06220 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CYD28_RS06220 IPR005665 Protein-export membrane protein SecF, bacterial CYD28_RS06225 IPR003156 DHHA1 domain CYD28_RS06225 IPR041122 RecJ, OB domain CYD28_RS06225 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal CYD28_RS06225 IPR004610 Bacterial RecJ exonuclease CYD28_RS06225 IPR038763 DHH phosphoesterase superfamily CYD28_RS06225 IPR001667 DDH domain CYD28_RS06230 IPR000836 Phosphoribosyltransferase domain CYD28_RS06230 IPR029057 Phosphoribosyltransferase-like CYD28_RS06230 IPR005764 Adenine phosphoribosyl transferase CYD28_RS06235 IPR004811 RelA/SpoT family CYD28_RS06235 IPR012675 Beta-grasp domain superfamily CYD28_RS06235 IPR002912 ACT domain CYD28_RS06235 IPR033655 RelA, TGS domain CYD28_RS06235 IPR012676 TGS-like CYD28_RS06235 IPR004095 TGS CYD28_RS06235 IPR007685 RelA/SpoT CYD28_RS06235 IPR003607 HD/PDEase domain CYD28_RS06240 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily CYD28_RS06240 IPR003732 D-aminoacyl-tRNA deacylase DTD CYD28_RS06245 IPR017273 Probable cell wall amidase LytH CYD28_RS06245 IPR003646 SH3-like domain, bacterial-type CYD28_RS06245 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain CYD28_RS06250 IPR033656 Histidyl-anticodon-binding CYD28_RS06250 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain CYD28_RS06250 IPR015807 Histidine-tRNA ligase CYD28_RS06250 IPR036621 Anticodon-binding domain superfamily CYD28_RS06250 IPR004154 Anticodon-binding CYD28_RS06250 IPR006195 Aminoacyl-tRNA synthetase, class II CYD28_RS06250 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CYD28_RS06255 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CYD28_RS06255 IPR006195 Aminoacyl-tRNA synthetase, class II CYD28_RS06255 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CYD28_RS06255 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS06255 IPR029351 GAD domain CYD28_RS06255 IPR004115 GAD-like domain superfamily CYD28_RS06255 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CYD28_RS06255 IPR004524 Aspartate-tRNA ligase, type 1 CYD28_RS06265 IPR035985 Ubiquitin-activating enzyme CYD28_RS06265 IPR000594 THIF-type NAD/FAD binding fold CYD28_RS06270 IPR003593 AAA+ ATPase domain CYD28_RS06270 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CYD28_RS06270 IPR021886 MgsA AAA+ ATPase C-terminal CYD28_RS06270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06270 IPR032423 AAA C-terminal domain CYD28_RS06270 IPR008824 RuvB-like P-loop domain CYD28_RS06275 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS06275 IPR030489 Transcription regulator Rrf2-type, conserved site CYD28_RS06275 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS06275 IPR000944 Transcription regulator Rrf2-type CYD28_RS06280 IPR019949 Luciferase family oxidoreductase, group 1 CYD28_RS06280 IPR036661 Luciferase-like domain superfamily CYD28_RS06280 IPR011251 Luciferase-like domain CYD28_RS06285 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CYD28_RS06285 IPR016454 Cysteine desulfurase CYD28_RS06285 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS06285 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS06285 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS06285 IPR000192 Aminotransferase class V domain CYD28_RS06290 IPR004506 tRNA-specific 2-thiouridylase CYD28_RS06290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS06290 IPR023382 Adenine nucleotide alpha hydrolase-like domains CYD28_RS06300 IPR029493 RecD helicase-like helix-hairpin-helix domain CYD28_RS06300 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06300 IPR027785 UvrD-like helicase C-terminal domain CYD28_RS06300 IPR041451 RecD-like DNA helicase, SH3 domain CYD28_RS06300 IPR006345 RecD-like DNA helicase CYD28_RS06300 IPR003593 AAA+ ATPase domain CYD28_RS06305 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain CYD28_RS06305 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CYD28_RS06305 IPR009000 Translation protein, beta-barrel domain superfamily CYD28_RS06305 IPR000253 Forkhead-associated (FHA) domain CYD28_RS06305 IPR003156 DHHA1 domain CYD28_RS06305 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CYD28_RS06305 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily CYD28_RS06305 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily CYD28_RS06305 IPR002318 Alanine-tRNA ligase, class IIc CYD28_RS06305 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CYD28_RS06310 IPR009309 IreB regulatory phosphoprotein CYD28_RS06315 IPR005227 Putative pre-16S rRNA nuclease CYD28_RS06315 IPR012337 Ribonuclease H-like superfamily CYD28_RS06315 IPR006641 YqgF/RNase H-like domain CYD28_RS06315 IPR037027 YqgF/RNase H-like domain superfamily CYD28_RS06320 IPR009711 Uncharacterised protein family UPF0473 CYD28_RS06340 IPR000764 Uridine kinase-like CYD28_RS06340 IPR026008 Uridine kinase CYD28_RS06340 IPR006083 Phosphoribulokinase/uridine kinase CYD28_RS06340 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06345 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily CYD28_RS06345 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CYD28_RS06345 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CYD28_RS06345 IPR023459 Transcription elongation factor GreA/GreB family CYD28_RS06345 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily CYD28_RS06345 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CYD28_RS06345 IPR006359 Transcription elongation factor GreA CYD28_RS06345 IPR028624 Transcription elongation factor GreA/GreB CYD28_RS06350 IPR029000 Cyclophilin-like domain superfamily CYD28_RS06350 IPR003833 Carboxyltransferase domain, subdomain C and D CYD28_RS06350 IPR010016 KipI family CYD28_RS06355 IPR029000 Cyclophilin-like domain superfamily CYD28_RS06355 IPR003778 Carboxyltransferase domain, subdomain A and B CYD28_RS06360 IPR011053 Single hybrid motif CYD28_RS06360 IPR001249 Acetyl-CoA biotin carboxyl carrier CYD28_RS06360 IPR001882 Biotin-binding site CYD28_RS06360 IPR000089 Biotin/lipoyl attachment CYD28_RS06365 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CYD28_RS06365 IPR016185 Pre-ATP-grasp domain superfamily CYD28_RS06365 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CYD28_RS06365 IPR005482 Biotin carboxylase, C-terminal CYD28_RS06365 IPR005481 Biotin carboxylase-like, N-terminal domain CYD28_RS06365 IPR011761 ATP-grasp fold CYD28_RS06365 IPR011054 Rudiment single hybrid motif CYD28_RS06365 IPR011764 Biotin carboxylation domain CYD28_RS06370 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CYD28_RS06370 IPR005501 LamB/YcsF/PxpA-like CYD28_RS06375 IPR001046 NRAMP family CYD28_RS06380 IPR010049 MTA/SAH nucleosidase CYD28_RS06380 IPR035994 Nucleoside phosphorylase superfamily CYD28_RS06380 IPR000845 Nucleoside phosphorylase domain CYD28_RS06385 IPR036412 HAD-like superfamily CYD28_RS06385 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CYD28_RS06385 IPR010021 HAD-superfamily phosphatase, YqeG-like CYD28_RS06385 IPR006439 HAD hydrolase, subfamily IA CYD28_RS06385 IPR023214 HAD superfamily CYD28_RS06390 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH CYD28_RS06390 IPR006073 GTP binding domain CYD28_RS06390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06390 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CYD28_RS06395 IPR036291 NAD(P)-binding domain superfamily CYD28_RS06395 IPR041121 SDH, C-terminal CYD28_RS06395 IPR011342 Shikimate dehydrogenase CYD28_RS06395 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CYD28_RS06395 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CYD28_RS06395 IPR022893 Shikimate dehydrogenase family CYD28_RS06400 IPR001890 RNA-binding, CRM domain CYD28_RS06400 IPR035920 YhbY-like superfamily CYD28_RS06400 IPR017924 RNA-binding protein YhbY CYD28_RS06405 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase CYD28_RS06405 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS06405 IPR004821 Cytidyltransferase-like domain CYD28_RS06410 IPR006674 HD domain CYD28_RS06410 IPR003607 HD/PDEase domain CYD28_RS06410 IPR005249 Conserved hypothetical protein CHP00488 CYD28_RS06415 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CYD28_RS06420 IPR041698 Methyltransferase domain 25 CYD28_RS06420 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS06425 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CYD28_RS06425 IPR004787 Competence protein ComEA CYD28_RS06425 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CYD28_RS06425 IPR010994 RuvA domain 2-like CYD28_RS06425 IPR019554 Soluble ligand binding domain CYD28_RS06430 IPR016192 APOBEC/CMP deaminase, zinc-binding CYD28_RS06430 IPR013404 Competence operon E, ComEB CYD28_RS06430 IPR016193 Cytidine deaminase-like CYD28_RS06430 IPR015517 Deoxycytidylate deaminase-related CYD28_RS06430 IPR035105 Deoxycytidylate deaminase domain CYD28_RS06430 IPR002125 Cytidine and deoxycytidylate deaminase domain CYD28_RS06435 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CYD28_RS06435 IPR035681 ComA-like, MBL domain CYD28_RS06435 IPR004477 ComEC/Rec2-related protein CYD28_RS06435 IPR025405 Domain of unknown function DUF4131 CYD28_RS06435 IPR004797 Competence protein ComEC/Rec2 CYD28_RS06435 IPR001279 Metallo-beta-lactamase CYD28_RS06440 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CYD28_RS06440 IPR005790 DNA polymerase III, delta subunit CYD28_RS06440 IPR010372 DNA polymerase III delta, N-terminal CYD28_RS06440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06450 IPR036510 Ribosomal protein S20 superfamily CYD28_RS06450 IPR002583 Ribosomal protein S20 CYD28_RS06455 IPR000795 Transcription factor, GTP-binding domain CYD28_RS06455 IPR004161 Translation elongation factor EFTu-like, domain 2 CYD28_RS06455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06455 IPR005225 Small GTP-binding protein domain CYD28_RS06455 IPR013842 GTP-binding protein LepA, C-terminal CYD28_RS06455 IPR000640 Elongation factor EFG, domain V-like CYD28_RS06455 IPR038363 LepA, C-terminal domain superfamily CYD28_RS06455 IPR035647 EF-G domain III/V-like CYD28_RS06455 IPR031157 Tr-type G domain, conserved site CYD28_RS06455 IPR006297 Elongation factor 4 CYD28_RS06455 IPR035654 Elongation factor 4, domain IV CYD28_RS06460 IPR010723 HemN, C-terminal CYD28_RS06460 IPR007197 Radical SAM CYD28_RS06460 IPR023404 Radical SAM, alpha/beta horseshoe CYD28_RS06460 IPR004559 Heme chaperone HemW-like CYD28_RS06460 IPR034505 Anaerobic coproporphyrinogen-III oxidase CYD28_RS06460 IPR006638 Elp3/MiaB/NifB CYD28_RS06465 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal CYD28_RS06465 IPR029016 GAF-like domain superfamily CYD28_RS06465 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS06465 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS06465 IPR002571 Heat-inducible transcription repressor HrcA CYD28_RS06465 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily CYD28_RS06470 IPR000740 GrpE nucleotide exchange factor CYD28_RS06470 IPR013805 GrpE nucleotide exchange factor, coiled-coil CYD28_RS06470 IPR009012 GrpE nucleotide exchange factor, head CYD28_RS06475 IPR012725 Chaperone DnaK CYD28_RS06475 IPR018181 Heat shock protein 70, conserved site CYD28_RS06475 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily CYD28_RS06475 IPR013126 Heat shock protein 70 family CYD28_RS06475 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily CYD28_RS06480 IPR036869 Chaperone J-domain superfamily CYD28_RS06480 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily CYD28_RS06480 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CYD28_RS06480 IPR008971 HSP40/DnaJ peptide-binding CYD28_RS06480 IPR001623 DnaJ domain CYD28_RS06480 IPR018253 DnaJ domain, conserved site CYD28_RS06480 IPR002939 Chaperone DnaJ, C-terminal CYD28_RS06480 IPR012724 Chaperone DnaJ CYD28_RS06485 IPR004498 Ribosomal protein L11 methyltransferase CYD28_RS06485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS06490 IPR015947 PUA-like superfamily CYD28_RS06490 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYD28_RS06490 IPR029028 Alpha/beta knot methyltransferases CYD28_RS06490 IPR006700 Ribosomal RNA small subunit methyltransferase E CYD28_RS06495 IPR005839 Methylthiotransferase CYD28_RS06495 IPR023404 Radical SAM, alpha/beta horseshoe CYD28_RS06495 IPR006467 MiaB-like tRNA modifying enzyme CYD28_RS06495 IPR006638 Elp3/MiaB/NifB CYD28_RS06495 IPR002792 TRAM domain CYD28_RS06495 IPR020612 Methylthiotransferase, conserved site CYD28_RS06495 IPR013848 Methylthiotransferase, N-terminal CYD28_RS06495 IPR038135 Methylthiotransferase, N-terminal domain superfamily CYD28_RS06495 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase CYD28_RS06495 IPR007197 Radical SAM CYD28_RS06500 IPR001911 Ribosomal protein S21 CYD28_RS06500 IPR018278 Ribosomal protein S21, conserved site CYD28_RS06500 IPR038380 Ribosomal protein S21 superfamily CYD28_RS06505 IPR029045 ClpP/crotonase-like domain superfamily CYD28_RS06505 IPR002810 NfeD-like, C-terminal domain CYD28_RS06505 IPR002825 Peptidase S49, serine-peptidase prokaryotes CYD28_RS06510 IPR022853 Uncharacterised protein family YdfA-immunity CYD28_RS06520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06520 IPR003714 PhoH-like protein CYD28_RS06525 IPR020549 Endoribonuclease YbeY, conserved site CYD28_RS06525 IPR002036 Endoribonuclease YbeY CYD28_RS06525 IPR023091 Metalloprotease catalytic domain superfamily, predicted CYD28_RS06530 IPR036945 Diacylglycerol kinase (DAGK) superfamily CYD28_RS06530 IPR033717 Undecaprenol kinase CYD28_RS06530 IPR000829 DAGK family CYD28_RS06535 IPR006262 Cytidine deaminase, homotetrameric CYD28_RS06535 IPR002125 Cytidine and deoxycytidylate deaminase domain CYD28_RS06535 IPR016193 Cytidine deaminase-like CYD28_RS06540 IPR004044 K Homology domain, type 2 CYD28_RS06540 IPR015946 K homology domain-like, alpha/beta CYD28_RS06540 IPR006073 GTP binding domain CYD28_RS06540 IPR005662 GTP-binding protein Era CYD28_RS06540 IPR030388 Era-type guanine nucleotide-binding (G) domain CYD28_RS06540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06540 IPR009019 K homology domain superfamily, prokaryotic type CYD28_RS06540 IPR005225 Small GTP-binding protein domain CYD28_RS06545 IPR022572 DNA replication/recombination mediator RecO, N-terminal CYD28_RS06545 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS06545 IPR037278 ARFGAP/RecO-like zinc finger CYD28_RS06545 IPR003717 Recombination protein O, RecO CYD28_RS06550 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 CYD28_RS06550 IPR036621 Anticodon-binding domain superfamily CYD28_RS06550 IPR004154 Anticodon-binding CYD28_RS06550 IPR006195 Aminoacyl-tRNA synthetase, class II CYD28_RS06550 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CYD28_RS06550 IPR002315 Glycyl-tRNA synthetase CYD28_RS06550 IPR033731 Glycyl-tRNA synthetase-like core domain CYD28_RS06550 IPR022961 Glycine-tRNA ligase, bacterial CYD28_RS06555 IPR000644 CBS domain CYD28_RS06555 IPR013196 Helix-turn-helix, type 11 CYD28_RS06555 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS06555 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS06555 IPR016842 Protein of unknown function UCP026546, HtH-CBS CYD28_RS06560 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein CYD28_RS06560 IPR005177 Bifunctional kinase-pyrophosphorylase CYD28_RS06565 IPR007693 DNA helicase, DnaB-like, N-terminal CYD28_RS06565 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CYD28_RS06565 IPR002694 Zinc finger, CHC2-type CYD28_RS06565 IPR030846 DNA primase DnaG, bacteria CYD28_RS06565 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily CYD28_RS06565 IPR013264 DNA primase, catalytic core, N-terminal CYD28_RS06565 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily CYD28_RS06565 IPR006295 DNA primase, DnaG CYD28_RS06565 IPR034151 Bacterial DnaG primase, TOPRIM domain CYD28_RS06565 IPR006171 TOPRIM domain CYD28_RS06565 IPR036977 DNA Primase, CHC2-type zinc finger CYD28_RS06570 IPR028630 RNA polymerase sigma factor RpoD CYD28_RS06570 IPR007127 RNA polymerase sigma factor 70, region 1.1 CYD28_RS06570 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CYD28_RS06570 IPR013324 RNA polymerase sigma factor, region 3/4-like CYD28_RS06570 IPR013325 RNA polymerase sigma factor, region 2 CYD28_RS06570 IPR042189 Sigma-70 factor, region 1.1 superfamily CYD28_RS06570 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS06570 IPR007630 RNA polymerase sigma-70 region 4 CYD28_RS06570 IPR007624 RNA polymerase sigma-70 region 3 CYD28_RS06570 IPR007627 RNA polymerase sigma-70 region 2 CYD28_RS06570 IPR009042 RNA polymerase sigma-70 region 1.2 CYD28_RS06570 IPR014284 RNA polymerase sigma-70 like domain CYD28_RS06570 IPR000943 RNA polymerase sigma-70 CYD28_RS06575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS06575 IPR006901 tRNA methyltransferase TrmK CYD28_RS06580 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CYD28_RS06580 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily CYD28_RS06580 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria CYD28_RS06580 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CYD28_RS06585 IPR011545 DEAD/DEAH box helicase domain CYD28_RS06585 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYD28_RS06585 IPR030881 DEAD-box ATP-dependent RNA helicase CshB CYD28_RS06585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06585 IPR014014 RNA helicase, DEAD-box type, Q motif CYD28_RS06585 IPR001650 Helicase, C-terminal CYD28_RS06590 IPR036237 Xylose isomerase-like superfamily CYD28_RS06590 IPR018246 AP endonuclease 2, zinc binding site CYD28_RS06590 IPR001719 AP endonuclease 2 CYD28_RS06590 IPR013022 Xylose isomerase-like, TIM barrel domain CYD28_RS06595 IPR017871 ABC transporter, conserved site CYD28_RS06595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06595 IPR003593 AAA+ ATPase domain CYD28_RS06595 IPR003439 ABC transporter-like CYD28_RS06600 IPR037294 ABC transporter, BtuC-like CYD28_RS06600 IPR001626 ABC transporter, TroCD-like CYD28_RS06605 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS06605 IPR002481 Ferric-uptake regulator CYD28_RS06605 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS06610 IPR001207 Transposase, mutator type CYD28_RS06615 IPR019832 Manganese/iron superoxide dismutase, C-terminal CYD28_RS06615 IPR019831 Manganese/iron superoxide dismutase, N-terminal CYD28_RS06615 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily CYD28_RS06615 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily CYD28_RS06615 IPR001189 Manganese/iron superoxide dismutase CYD28_RS06615 IPR019833 Manganese/iron superoxide dismutase, binding site CYD28_RS06625 IPR038584 Ribosomal protein L33 superfamily CYD28_RS06625 IPR001705 Ribosomal protein L33 CYD28_RS06625 IPR018264 Ribosomal protein L33, conserved site CYD28_RS06625 IPR011332 Zinc-binding ribosomal protein CYD28_RS06630 IPR002698 5-formyltetrahydrofolate cyclo-ligase CYD28_RS06630 IPR037171 NagB/RpiA transferase-like CYD28_RS06630 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily CYD28_RS06640 IPR009256 Protein of unknown function DUF910 CYD28_RS06640 IPR023164 YqgQ-like superfamily CYD28_RS06645 IPR000600 ROK family CYD28_RS06645 IPR004654 Glucokinase ROK CYD28_RS06650 IPR029756 MTH1187/YkoF-like CYD28_RS06650 IPR002767 Thiamine-binding protein CYD28_RS06655 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CYD28_RS06655 IPR001279 Metallo-beta-lactamase CYD28_RS06660 IPR003593 AAA+ ATPase domain CYD28_RS06660 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06660 IPR001482 Type II/IV secretion system protein CYD28_RS06665 IPR003004 GspF/PilC family CYD28_RS06665 IPR001992 Type II secretion system conserved site CYD28_RS06665 IPR018076 Type II secretion system F domain CYD28_RS06665 IPR042094 Type II secretion system F domain superfamily CYD28_RS06670 IPR012902 Prokaryotic N-terminal methylation site CYD28_RS06670 IPR000983 Bacterial general secretion pathway protein G-type pilin CYD28_RS06670 IPR016940 ComG operon protein C CYD28_RS06695 IPR000623 Shikimate kinase/Threonine synthase-like 1 CYD28_RS06695 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06695 IPR031322 Shikimate kinase/gluconokinase CYD28_RS06695 IPR023000 Shikimate kinase, conserved site CYD28_RS06700 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CYD28_RS06700 IPR006223 Glycine cleavage system T protein CYD28_RS06700 IPR022903 Glycine cleavage system T protein, bacteria CYD28_RS06700 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CYD28_RS06700 IPR006222 Aminomethyltransferase, folate-binding domain CYD28_RS06700 IPR028896 Aminomethyltransferase-like CYD28_RS06700 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal CYD28_RS06705 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS06705 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 CYD28_RS06705 IPR020581 Glycine cleavage system P protein CYD28_RS06705 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS06705 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS06710 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS06710 IPR020581 Glycine cleavage system P protein CYD28_RS06710 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 CYD28_RS06710 IPR000192 Aminotransferase class V domain CYD28_RS06710 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS06710 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS06715 IPR001763 Rhodanese-like domain CYD28_RS06715 IPR036873 Rhodanese-like domain superfamily CYD28_RS06720 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CYD28_RS06720 IPR024898 Octanoyltransferase LipM CYD28_RS06735 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CYD28_RS06735 IPR001714 Peptidase M24, methionine aminopeptidase CYD28_RS06735 IPR036005 Creatinase/aminopeptidase-like CYD28_RS06735 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CYD28_RS06735 IPR000587 Creatinase, N-terminal CYD28_RS06735 IPR000994 Peptidase M24 CYD28_RS06740 IPR020599 Translation elongation factor P/YeiP CYD28_RS06740 IPR014722 Ribosomal protein L2, domain 2 CYD28_RS06740 IPR001059 Translation elongation factor P/YeiP, central CYD28_RS06740 IPR013185 Translation elongation factor, KOW-like CYD28_RS06740 IPR008991 Translation protein SH3-like domain superfamily CYD28_RS06740 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS06740 IPR011768 Translation elongation factor P CYD28_RS06740 IPR013852 Translation elongation factor P/YeiP, conserved site CYD28_RS06740 IPR015365 Elongation factor P, C-terminal CYD28_RS06745 IPR001882 Biotin-binding site CYD28_RS06745 IPR001249 Acetyl-CoA biotin carboxyl carrier CYD28_RS06745 IPR011053 Single hybrid motif CYD28_RS06745 IPR000089 Biotin/lipoyl attachment CYD28_RS06750 IPR011764 Biotin carboxylation domain CYD28_RS06750 IPR011761 ATP-grasp fold CYD28_RS06750 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CYD28_RS06750 IPR011054 Rudiment single hybrid motif CYD28_RS06750 IPR016185 Pre-ATP-grasp domain superfamily CYD28_RS06750 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CYD28_RS06750 IPR005482 Biotin carboxylase, C-terminal CYD28_RS06750 IPR005481 Biotin carboxylase-like, N-terminal domain CYD28_RS06755 IPR005531 Alkaline shock protein Asp23 CYD28_RS06760 IPR006027 NusB/RsmB/TIM44 CYD28_RS06760 IPR011605 NusB antitermination factor CYD28_RS06760 IPR035926 NusB-like superfamily CYD28_RS06765 IPR003753 Exonuclease VII, large subunit CYD28_RS06765 IPR025824 OB-fold nucleic acid binding domain CYD28_RS06765 IPR020579 Exonuclease VII, large subunit, C-terminal CYD28_RS06770 IPR003761 Exonuclease VII, small subunit CYD28_RS06770 IPR037004 Exonuclease VII, small subunit superfamily CYD28_RS06775 IPR000092 Polyprenyl synthetase CYD28_RS06775 IPR008949 Isoprenoid synthase domain superfamily CYD28_RS06775 IPR033749 Polyprenyl synthetase, conserved site CYD28_RS06780 IPR036251 Arginine repressor, C-terminal domain superfamily CYD28_RS06780 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS06780 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS06780 IPR020900 Arginine repressor, DNA-binding domain CYD28_RS06780 IPR001669 Arginine repressor CYD28_RS06780 IPR020899 Arginine repressor, C-terminal CYD28_RS06785 IPR004604 DNA recombination/repair protein RecN CYD28_RS06785 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06785 IPR038729 Rad50/SbcC-type AAA domain CYD28_RS06790 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS06790 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD28_RS06790 IPR023753 FAD/NAD(P)-binding domain CYD28_RS06790 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CYD28_RS06790 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CYD28_RS06790 IPR006258 Dihydrolipoamide dehydrogenase CYD28_RS06790 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CYD28_RS06795 IPR029061 Thiamin diphosphate-binding fold CYD28_RS06795 IPR001017 Dehydrogenase, E1 component CYD28_RS06800 IPR029061 Thiamin diphosphate-binding fold CYD28_RS06800 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CYD28_RS06800 IPR005475 Transketolase-like, pyrimidine-binding domain CYD28_RS06800 IPR033248 Transketolase, C-terminal domain CYD28_RS06805 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CYD28_RS06805 IPR036625 E3-binding domain superfamily CYD28_RS06805 IPR004167 Peripheral subunit-binding domain CYD28_RS06805 IPR000089 Biotin/lipoyl attachment CYD28_RS06805 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CYD28_RS06805 IPR011053 Single hybrid motif CYD28_RS06805 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CYD28_RS06810 IPR009474 Putative bacilliredoxin, YphP/YqiW family CYD28_RS06810 IPR036249 Thioredoxin-like superfamily CYD28_RS06815 IPR010343 Aromatic acid exporter family member 1 CYD28_RS06815 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily CYD28_RS06815 IPR021062 Putative aromatic acid exporter, C-terminal CYD28_RS06825 IPR002933 Peptidase M20 CYD28_RS06825 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS06825 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CYD28_RS06825 IPR011650 Peptidase M20, dimerisation domain CYD28_RS06825 IPR008007 Peptidase M42 CYD28_RS06825 IPR010162 Peptidase M20B, peptidase T-like CYD28_RS06830 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CYD28_RS06830 IPR036291 NAD(P)-binding domain superfamily CYD28_RS06830 IPR006184 6-phosphogluconate-binding site CYD28_RS06830 IPR006183 6-phosphogluconate dehydrogenase CYD28_RS06830 IPR006114 6-phosphogluconate dehydrogenase, C-terminal CYD28_RS06830 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CYD28_RS06830 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating CYD28_RS06830 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding CYD28_RS06835 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CYD28_RS06835 IPR028082 Periplasmic binding protein-like I CYD28_RS06835 IPR000843 LacI-type HTH domain CYD28_RS06840 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CYD28_RS06840 IPR013780 Glycosyl hydrolase, all-beta CYD28_RS06840 IPR017853 Glycoside hydrolase superfamily CYD28_RS06840 IPR032091 Maltogenic Amylase, C-terminal CYD28_RS06850 IPR019796 Glucose-6-phosphate dehydrogenase, active site CYD28_RS06850 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding CYD28_RS06850 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal CYD28_RS06850 IPR036291 NAD(P)-binding domain superfamily CYD28_RS06850 IPR001282 Glucose-6-phosphate dehydrogenase CYD28_RS06855 IPR013471 Ribonuclease Z/BN CYD28_RS06855 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CYD28_RS06855 IPR001279 Metallo-beta-lactamase CYD28_RS06860 IPR000304 Pyrroline-5-carboxylate reductase CYD28_RS06860 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CYD28_RS06860 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CYD28_RS06860 IPR036291 NAD(P)-binding domain superfamily CYD28_RS06860 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CYD28_RS06865 IPR036291 NAD(P)-binding domain superfamily CYD28_RS06865 IPR020904 Short-chain dehydrogenase/reductase, conserved site CYD28_RS06865 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS06875 IPR036812 NADP-dependent oxidoreductase domain superfamily CYD28_RS06875 IPR020471 Aldo/keto reductase CYD28_RS06875 IPR023210 NADP-dependent oxidoreductase domain CYD28_RS06880 IPR020476 NUDIX hydrolase CYD28_RS06880 IPR015797 NUDIX hydrolase-like domain superfamily CYD28_RS06880 IPR020084 NUDIX hydrolase, conserved site CYD28_RS06880 IPR000086 NUDIX hydrolase domain CYD28_RS06885 IPR002481 Ferric-uptake regulator CYD28_RS06885 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS06885 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS06890 IPR011010 DNA breaking-rejoining enzyme, catalytic core CYD28_RS06890 IPR013762 Integrase-like, catalytic domain superfamily CYD28_RS06890 IPR002104 Integrase, catalytic domain CYD28_RS06890 IPR010998 Integrase/recombinase, N-terminal CYD28_RS06890 IPR004107 Integrase, SAM-like, N-terminal CYD28_RS06890 IPR011932 Tyrosine recombinase XerD CYD28_RS06890 IPR023009 Tyrosine recombinase XerC/XerD CYD28_RS06900 IPR003768 Segregation and condensation protein A CYD28_RS06905 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS06905 IPR005234 Chromosome segregation/condensation protein ScpB CYD28_RS06905 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS06915 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS06915 IPR001867 OmpR/PhoB-type DNA-binding domain CYD28_RS06915 IPR011006 CheY-like superfamily CYD28_RS06915 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS06915 IPR039420 Transcriptional regulatory protein WalR-like CYD28_RS06920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CYD28_RS06920 IPR041328 ResE, histidine kinase sensor domain CYD28_RS06920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CYD28_RS06920 IPR005467 Histidine kinase domain CYD28_RS06920 IPR003660 HAMP domain CYD28_RS06920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS06920 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS06920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CYD28_RS06925 IPR024529 ECF transporter, substrate-specific component CYD28_RS06925 IPR025720 ECF transporter, Riboflavin transporter RibU CYD28_RS06930 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYD28_RS06930 IPR001080 3Fe-4S ferredoxin CYD28_RS06940 IPR011545 DEAD/DEAH box helicase domain CYD28_RS06940 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06940 IPR001650 Helicase, C-terminal CYD28_RS06940 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYD28_RS06940 IPR004589 DNA helicase, ATP-dependent, RecQ type CYD28_RS06940 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site CYD28_RS06945 IPR018392 LysM domain CYD28_RS06945 IPR036779 LysM domain superfamily CYD28_RS06955 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA CYD28_RS06955 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS06960 IPR037152 L-asparaginase, N-terminal domain superfamily CYD28_RS06960 IPR040919 Asparaginase/glutaminase, C-terminal CYD28_RS06960 IPR027475 Asparaginase/glutaminase, active site 2 CYD28_RS06960 IPR020827 Asparaginase/glutaminase, active site 1 CYD28_RS06960 IPR006034 Asparaginase/glutaminase-like CYD28_RS06960 IPR036152 Asparaginase/glutaminase-like superfamily CYD28_RS06960 IPR004550 L-asparaginase, type II CYD28_RS06960 IPR027473 L-asparaginase, C-terminal CYD28_RS06960 IPR027474 L-asparaginase, N-terminal CYD28_RS06965 IPR011994 Cytidylate kinase domain CYD28_RS06965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06965 IPR003136 Cytidylate kinase CYD28_RS06970 IPR003029 S1 domain CYD28_RS06970 IPR022967 RNA-binding domain, S1 CYD28_RS06970 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS06975 IPR005225 Small GTP-binding protein domain CYD28_RS06975 IPR016484 GTP-binding protein EngA CYD28_RS06975 IPR006073 GTP binding domain CYD28_RS06975 IPR032859 GTPase Der, C-terminal KH-domain-like CYD28_RS06975 IPR015946 K homology domain-like, alpha/beta CYD28_RS06975 IPR031166 EngA-type guanine nucleotide-binding (G) domain CYD28_RS06975 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS06980 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CYD28_RS06980 IPR013328 6-phosphogluconate dehydrogenase, domain 2 CYD28_RS06980 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CYD28_RS06980 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CYD28_RS06980 IPR036291 NAD(P)-binding domain superfamily CYD28_RS06980 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CYD28_RS06985 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily CYD28_RS06985 IPR000119 Histone-like DNA-binding protein CYD28_RS06985 IPR020816 Histone-like DNA-binding protein, conserved site CYD28_RS07000 IPR004033 UbiE/COQ5 methyltransferase CYD28_RS07000 IPR023576 UbiE/COQ5 methyltransferase, conserved site CYD28_RS07000 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS07005 IPR014119 Heptaprenyl diphosphate synthase component II CYD28_RS07005 IPR008949 Isoprenoid synthase domain superfamily CYD28_RS07005 IPR033749 Polyprenyl synthetase, conserved site CYD28_RS07005 IPR000092 Polyprenyl synthetase CYD28_RS07010 IPR001564 Nucleoside diphosphate kinase CYD28_RS07010 IPR036850 Nucleoside diphosphate kinase-like domain superfamily CYD28_RS07010 IPR023005 Nucleoside diphosphate kinase, active site CYD28_RS07010 IPR034907 Nucleoside diphosphate kinase-like domain CYD28_RS07015 IPR000453 Chorismate synthase CYD28_RS07015 IPR035904 Chorismate synthase AroC superfamily CYD28_RS07015 IPR020541 Chorismate synthase, conserved site CYD28_RS07020 IPR030963 3-dehydroquinate synthase family CYD28_RS07020 IPR030960 3-dehydroquinate synthase domain CYD28_RS07020 IPR016037 3-dehydroquinate synthase AroB CYD28_RS07025 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CYD28_RS07025 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CYD28_RS07025 IPR001986 Enolpyruvate transferase domain CYD28_RS07025 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CYD28_RS07025 IPR036968 Enolpyruvate transferase domain superfamily CYD28_RS07035 IPR014957 IDEAL domain CYD28_RS07035 IPR014963 Uncharacterised domain UPF0302, N-terminal CYD28_RS07035 IPR011188 Uncharacterised protein family UPF0302 CYD28_RS07035 IPR038091 UPF0302, N-terminal domain superfamily CYD28_RS07040 IPR009845 Protein of unknown function DUF1405 CYD28_RS07045 IPR007395 Putative neutral zinc metallopeptidase CYD28_RS07050 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CYD28_RS07050 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD CYD28_RS07055 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA CYD28_RS07055 IPR001296 Glycosyl transferase, family 1 CYD28_RS07055 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain CYD28_RS07060 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain CYD28_RS07060 IPR032810 CCA-adding enzyme, C-terminal CYD28_RS07060 IPR023068 CCA-adding enzyme, firmicutes CYD28_RS07060 IPR002646 Poly A polymerase, head domain CYD28_RS07065 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CYD28_RS07065 IPR003142 Biotin protein ligase, C-terminal CYD28_RS07065 IPR004409 Biotin operon repressor, helix-turn-helix domain CYD28_RS07065 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS07065 IPR008988 Transcriptional repressor, C-terminal CYD28_RS07065 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CYD28_RS07065 IPR013196 Helix-turn-helix, type 11 CYD28_RS07065 IPR030855 Bifunctional ligase/repressor BirA CYD28_RS07065 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS07070 IPR012337 Ribonuclease H-like superfamily CYD28_RS07070 IPR036397 Ribonuclease H superfamily CYD28_RS07070 IPR013520 Exonuclease, RNase T/DNA polymerase III CYD28_RS07070 IPR001650 Helicase, C-terminal CYD28_RS07070 IPR006555 ATP-dependent helicase, C-terminal CYD28_RS07070 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS07070 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CYD28_RS07070 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type CYD28_RS07070 IPR006935 Helicase/UvrB, N-terminal CYD28_RS07070 IPR006310 3'-5' exonuclease DinG CYD28_RS07075 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS07075 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CYD28_RS07075 IPR006195 Aminoacyl-tRNA synthetase, class II CYD28_RS07075 IPR004522 Asparagine-tRNA ligase CYD28_RS07075 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CYD28_RS07075 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CYD28_RS07080 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS07080 IPR034829 DnaD-like domain superfamily CYD28_RS07080 IPR006343 DnaD domain CYD28_RS07085 IPR011257 DNA glycosylase CYD28_RS07085 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CYD28_RS07085 IPR000445 Helix-hairpin-helix motif CYD28_RS07085 IPR004036 Endonuclease III-like, conserved site-2 CYD28_RS07085 IPR003265 HhH-GPD domain CYD28_RS07085 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CYD28_RS07085 IPR005759 Endonuclease III CYD28_RS07085 IPR004035 Endonuclease III, iron-sulphur binding site CYD28_RS07095 IPR036116 Fibronectin type III superfamily CYD28_RS07095 IPR012338 Beta-lactamase/transpeptidase-like CYD28_RS07095 IPR003961 Fibronectin type III CYD28_RS07095 IPR013783 Immunoglobulin-like fold CYD28_RS07095 IPR023346 Lysozyme-like domain superfamily CYD28_RS07095 IPR036950 Penicillin binding protein transglycosylase domain CYD28_RS07095 IPR001460 Penicillin-binding protein, transpeptidase CYD28_RS07095 IPR001264 Glycosyl transferase, family 51 CYD28_RS07100 IPR004612 Holliday junction resolvase RecU CYD28_RS07100 IPR011856 tRNA endonuclease-like domain superfamily CYD28_RS07100 IPR011335 Restriction endonuclease type II-like CYD28_RS07110 IPR010697 YspA SLOG family CYD28_RS07115 IPR019933 DivIVA domain CYD28_RS07115 IPR007793 DivIVA family CYD28_RS07115 IPR011229 Cell cycle protein GpsB CYD28_RS07125 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS07125 IPR000241 Putative RNA methylase domain CYD28_RS07125 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CYD28_RS07125 IPR004114 THUMP domain CYD28_RS07135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS07135 IPR027094 Mitofusin family CYD28_RS07135 IPR022812 Dynamin superfamily CYD28_RS07140 IPR029060 PIN-like domain superfamily CYD28_RS07140 IPR008918 Helix-hairpin-helix motif, class 2 CYD28_RS07140 IPR038969 Flap endonuclease CYD28_RS07140 IPR020045 DNA polymerase I-like, H3TH domain CYD28_RS07140 IPR036279 5'-3' exonuclease, C-terminal domain superfamily CYD28_RS07140 IPR002421 5'-3' exonuclease, N-terminal CYD28_RS07140 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CYD28_RS07145 IPR005877 YSIRK Gram-positive signal peptide CYD28_RS07145 IPR009063 Immunoglobulin/albumin-binding domain superfamily CYD28_RS07145 IPR002988 Protein G-related albumin-binding (GA) module CYD28_RS07145 IPR026361 Extracellular matrix-binding protein Ebh domain CYD28_RS07145 IPR020840 Extracellular matrix-binding protein ebh, GA module CYD28_RS07150 IPR005877 YSIRK Gram-positive signal peptide CYD28_RS07150 IPR009063 Immunoglobulin/albumin-binding domain superfamily CYD28_RS07150 IPR002988 Protein G-related albumin-binding (GA) module CYD28_RS07150 IPR020840 Extracellular matrix-binding protein ebh, GA module CYD28_RS07150 IPR026361 Extracellular matrix-binding protein Ebh domain CYD28_RS07150 IPR011439 Domain of unknown function DUF1542 CYD28_RS07165 IPR003744 Queuosine precursor transporter CYD28_RS07175 IPR004155 PBS lyase HEAT-like repeat CYD28_RS07175 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily CYD28_RS07175 IPR014824 Scaffold protein Nfu/NifU, N-terminal CYD28_RS07175 IPR011989 Armadillo-like helical CYD28_RS07175 IPR025989 Virulence factor domain CYD28_RS07175 IPR016024 Armadillo-type fold CYD28_RS07180 IPR004155 PBS lyase HEAT-like repeat CYD28_RS07180 IPR025989 Virulence factor domain CYD28_RS07180 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily CYD28_RS07180 IPR014824 Scaffold protein Nfu/NifU, N-terminal CYD28_RS07180 IPR016024 Armadillo-type fold CYD28_RS07180 IPR011989 Armadillo-like helical CYD28_RS07185 IPR036249 Thioredoxin-like superfamily CYD28_RS07185 IPR009474 Putative bacilliredoxin, YphP/YqiW family CYD28_RS07190 IPR000398 Thymidylate synthase CYD28_RS07190 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily CYD28_RS07190 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CYD28_RS07190 IPR020940 Thymidylate synthase, active site CYD28_RS07195 IPR001796 Dihydrofolate reductase domain CYD28_RS07195 IPR017925 Dihydrofolate reductase conserved site CYD28_RS07195 IPR024072 Dihydrofolate reductase-like domain superfamily CYD28_RS07195 IPR012259 Dihydrofolate reductase CYD28_RS07200 IPR003797 DegV CYD28_RS07205 IPR002569 Peptide methionine sulphoxide reductase MsrA CYD28_RS07205 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CYD28_RS07210 IPR011057 Mss4-like superfamily CYD28_RS07210 IPR002579 Peptide methionine sulphoxide reductase MrsB CYD28_RS07210 IPR028427 Peptide methionine sulfoxide reductase CYD28_RS07215 IPR011055 Duplicated hybrid motif CYD28_RS07215 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CYD28_RS07220 IPR023089 YozE SAM-like domain CYD28_RS07220 IPR010673 Protein of unknown function UPF0346 CYD28_RS07220 IPR036806 YozE SAM-like superfamily CYD28_RS07225 IPR005151 Tail specific protease CYD28_RS07225 IPR036034 PDZ superfamily CYD28_RS07225 IPR036366 PGBD superfamily CYD28_RS07225 IPR041489 PDZ domain 6 CYD28_RS07225 IPR036365 PGBD-like superfamily CYD28_RS07225 IPR002477 Peptidoglycan binding-like CYD28_RS07225 IPR004447 C-terminal-processing peptidase S41A CYD28_RS07225 IPR001478 PDZ domain CYD28_RS07225 IPR029045 ClpP/crotonase-like domain superfamily CYD28_RS07235 IPR004276 Glycosyltransferase family 28, N-terminal domain CYD28_RS07235 IPR007235 Glycosyl transferase, family 28, C-terminal CYD28_RS07235 IPR006009 N-acetylglucosaminyltransferase, MurG CYD28_RS07240 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CYD28_RS07240 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CYD28_RS07245 IPR039420 Transcriptional regulatory protein WalR-like CYD28_RS07245 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS07245 IPR011006 CheY-like superfamily CYD28_RS07245 IPR001867 OmpR/PhoB-type DNA-binding domain CYD28_RS07245 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS07245 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS07250 IPR005467 Histidine kinase domain CYD28_RS07250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS07250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CYD28_RS07250 IPR041610 ArlS, sensor domain CYD28_RS07250 IPR003660 HAMP domain CYD28_RS07250 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS07250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CYD28_RS07250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain CYD28_RS07255 IPR011603 2-oxoglutarate dehydrogenase E1 component CYD28_RS07255 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal CYD28_RS07255 IPR005475 Transketolase-like, pyrimidine-binding domain CYD28_RS07255 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial CYD28_RS07255 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily CYD28_RS07255 IPR001017 Dehydrogenase, E1 component CYD28_RS07255 IPR029061 Thiamin diphosphate-binding fold CYD28_RS07260 IPR006255 Dihydrolipoamide succinyltransferase CYD28_RS07260 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CYD28_RS07260 IPR000089 Biotin/lipoyl attachment CYD28_RS07260 IPR036625 E3-binding domain superfamily CYD28_RS07260 IPR004167 Peripheral subunit-binding domain CYD28_RS07260 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CYD28_RS07260 IPR011053 Single hybrid motif CYD28_RS07260 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CYD28_RS07280 IPR003593 AAA+ ATPase domain CYD28_RS07280 IPR013615 CbbQ/NirQ/NorQ, C-terminal CYD28_RS07280 IPR011704 ATPase, dynein-related, AAA domain CYD28_RS07280 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS07280 IPR001270 ClpA/B family CYD28_RS07285 IPR002035 von Willebrand factor, type A CYD28_RS07285 IPR036465 von Willebrand factor A-like domain superfamily CYD28_RS07290 IPR004685 Branched-chain amino acid transport system II carrier protein CYD28_RS07295 IPR008863 Toxic anion resistance CYD28_RS07305 IPR001792 Acylphosphatase-like domain CYD28_RS07305 IPR036046 Acylphosphatase-like domain superfamily CYD28_RS07305 IPR017968 Acylphosphatase, conserved site CYD28_RS07315 IPR012156 Cold shock, CspA CYD28_RS07315 IPR019844 Cold-shock (CSD) domain CYD28_RS07315 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS07315 IPR011129 Cold shock domain CYD28_RS07315 IPR002059 Cold-shock protein, DNA-binding CYD28_RS07320 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS07320 IPR001584 Integrase, catalytic core CYD28_RS07320 IPR012337 Ribonuclease H-like superfamily CYD28_RS07325 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CYD28_RS07325 IPR002986 Diaminopimelate decarboxylase, LysA CYD28_RS07325 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CYD28_RS07325 IPR029066 PLP-binding barrel CYD28_RS07325 IPR000183 Ornithine/DAP/Arg decarboxylase CYD28_RS07325 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CYD28_RS07325 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CYD28_RS07330 IPR001608 Alanine racemase, N-terminal CYD28_RS07330 IPR029066 PLP-binding barrel CYD28_RS07330 IPR011079 Alanine racemase, C-terminal CYD28_RS07330 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CYD28_RS07330 IPR000821 Alanine racemase CYD28_RS07335 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS07335 IPR017439 Amidohydrolase CYD28_RS07335 IPR002933 Peptidase M20 CYD28_RS07340 IPR011004 Trimeric LpxA-like superfamily CYD28_RS07340 IPR018357 Hexapeptide transferase, conserved site CYD28_RS07340 IPR001451 Hexapeptide repeat CYD28_RS07340 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal CYD28_RS07340 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH CYD28_RS07345 IPR022664 Dihydrodipicolinate reductase, conserved site CYD28_RS07345 IPR022663 Dihydrodipicolinate reductase, C-terminal CYD28_RS07345 IPR000846 Dihydrodipicolinate reductase, N-terminal CYD28_RS07345 IPR036291 NAD(P)-binding domain superfamily CYD28_RS07345 IPR023940 Dihydrodipicolinate reductase CYD28_RS07350 IPR002220 DapA-like CYD28_RS07350 IPR020625 Schiff base-forming aldolase, active site CYD28_RS07350 IPR013785 Aldolase-type TIM barrel CYD28_RS07350 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CYD28_RS07355 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type CYD28_RS07355 IPR012080 Aspartate-semialdehyde dehydrogenase CYD28_RS07355 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CYD28_RS07355 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site CYD28_RS07355 IPR036291 NAD(P)-binding domain superfamily CYD28_RS07355 IPR000534 Semialdehyde dehydrogenase, NAD-binding CYD28_RS07360 IPR036393 Acetylglutamate kinase-like superfamily CYD28_RS07360 IPR002912 ACT domain CYD28_RS07360 IPR027795 CASTOR, ACT domain CYD28_RS07360 IPR001048 Aspartate/glutamate/uridylate kinase CYD28_RS07360 IPR041740 Aspartokinase catalytic domain CYD28_RS07360 IPR018042 Aspartate kinase, conserved site CYD28_RS07360 IPR005260 Aspartate kinase, monofunctional class CYD28_RS07360 IPR001341 Aspartate kinase CYD28_RS07365 IPR032781 ABC-transporter extension domain CYD28_RS07365 IPR003439 ABC transporter-like CYD28_RS07365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS07365 IPR003593 AAA+ ATPase domain CYD28_RS07370 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS07370 IPR040764 Conserved virulence factor B-like, winged helix domain CYD28_RS07370 IPR039566 Conserved virulence factor B, S1 domain CYD28_RS07370 IPR014464 Conserved virulence factor B CYD28_RS07375 IPR024370 PBP domain CYD28_RS07375 IPR011862 Phosphate binding protein CYD28_RS07380 IPR011864 Phosphate ABC transporter, permease protein PstC CYD28_RS07380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS07380 IPR035906 MetI-like superfamily CYD28_RS07385 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS07385 IPR005672 Phosphate transport system permease protein PstA CYD28_RS07385 IPR035906 MetI-like superfamily CYD28_RS07390 IPR017871 ABC transporter, conserved site CYD28_RS07390 IPR015850 ABC transporter, phosphate import, PstB CYD28_RS07390 IPR005670 Phosphate transport system permease protein 1 CYD28_RS07390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS07390 IPR003439 ABC transporter-like CYD28_RS07390 IPR003593 AAA+ ATPase domain CYD28_RS07395 IPR038078 PhoU-like domain superfamily CYD28_RS07395 IPR028366 Phosphate transport system protein PhoU CYD28_RS07395 IPR026022 PhoU domain CYD28_RS07400 IPR001567 Peptidase M3A/M3B catalytic domain CYD28_RS07400 IPR013647 Oligopeptidase F, N-terminal domain CYD28_RS07400 IPR004438 Peptidase M3B, oligoendopeptidase F CYD28_RS07400 IPR042088 Oligoendopeptidase F, C-terminal domain CYD28_RS07410 IPR002491 ABC transporter periplasmic binding domain CYD28_RS07410 IPR033870 FatB domain CYD28_RS07415 IPR023214 HAD superfamily CYD28_RS07415 IPR006379 HAD-superfamily hydrolase, subfamily IIB CYD28_RS07415 IPR036412 HAD-like superfamily CYD28_RS07415 IPR000150 Cof family CYD28_RS07420 IPR003447 FemABX peptidyl transferase CYD28_RS07420 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS07425 IPR003447 FemABX peptidyl transferase CYD28_RS07425 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS07425 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CYD28_RS07435 IPR013785 Aldolase-type TIM barrel CYD28_RS07435 IPR018204 Tryptophan synthase, alpha chain, active site CYD28_RS07435 IPR002028 Tryptophan synthase, alpha chain CYD28_RS07435 IPR011060 Ribulose-phosphate binding barrel CYD28_RS07440 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYD28_RS07440 IPR023026 Tryptophan synthase beta chain/beta chain-like CYD28_RS07440 IPR006654 Tryptophan synthase, beta chain CYD28_RS07440 IPR006653 Tryptophan synthase, beta chain, conserved site CYD28_RS07440 IPR001926 Pyridoxal-phosphate dependent enzyme CYD28_RS07445 IPR011060 Ribulose-phosphate binding barrel CYD28_RS07445 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) CYD28_RS07445 IPR013785 Aldolase-type TIM barrel CYD28_RS07450 IPR011060 Ribulose-phosphate binding barrel CYD28_RS07450 IPR013785 Aldolase-type TIM barrel CYD28_RS07450 IPR013798 Indole-3-glycerol phosphate synthase CYD28_RS07450 IPR001468 Indole-3-glycerol phosphate synthase, conserved site CYD28_RS07455 IPR005940 Anthranilate phosphoribosyl transferase CYD28_RS07455 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CYD28_RS07455 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CYD28_RS07455 IPR000312 Glycosyl transferase, family 3 CYD28_RS07460 IPR029062 Class I glutamine amidotransferase-like CYD28_RS07460 IPR017926 Glutamine amidotransferase CYD28_RS07460 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CYD28_RS07465 IPR015890 Chorismate-utilising enzyme, C-terminal CYD28_RS07465 IPR005801 ADC synthase CYD28_RS07465 IPR005256 Anthranilate synthase component I, PabB-like CYD28_RS07465 IPR006805 Anthranilate synthase component I, N-terminal CYD28_RS07465 IPR019999 Anthranilate synthase component I-like CYD28_RS07470 IPR008007 Peptidase M42 CYD28_RS07470 IPR023367 Peptidase M42, domain 2 CYD28_RS07475 IPR036291 NAD(P)-binding domain superfamily CYD28_RS07475 IPR003099 Prephenate dehydrogenase CYD28_RS07475 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily CYD28_RS07475 IPR002912 ACT domain CYD28_RS07480 IPR001126 UmuC domain CYD28_RS07480 IPR017961 DNA polymerase, Y-family, little finger domain CYD28_RS07480 IPR036775 DNA polymerase, Y-family, little finger domain superfamily CYD28_RS07480 IPR024728 DNA polymerase type-Y, HhH motif CYD28_RS07485 IPR004370 4-oxalocrotonate tautomerase CYD28_RS07485 IPR014347 Tautomerase/MIF superfamily CYD28_RS07485 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type CYD28_RS07490 IPR004474 Cell envelope-related transcriptional attenuator domain CYD28_RS07495 IPR002569 Peptide methionine sulphoxide reductase MsrA CYD28_RS07495 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily CYD28_RS07500 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS07500 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal CYD28_RS07500 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CYD28_RS07505 IPR002549 Transmembrane protein TqsA-like CYD28_RS07510 IPR001550 Transcription antiterminator, conserved site CYD28_RS07510 IPR004341 CAT RNA-binding domain CYD28_RS07510 IPR036650 CAT RNA-binding domain superfamily CYD28_RS07510 IPR036634 PRD domain superfamily CYD28_RS07510 IPR011608 PRD domain CYD28_RS07515 IPR001463 Sodium:alanine symporter CYD28_RS07520 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat CYD28_RS07520 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CYD28_RS07520 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CYD28_RS07520 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily CYD28_RS07520 IPR005741 DNA topoisomerase IV subunit A, Gram-positive CYD28_RS07520 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CYD28_RS07520 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CYD28_RS07525 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS07525 IPR002288 DNA gyrase B subunit, C-terminal CYD28_RS07525 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS07525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS07525 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes CYD28_RS07525 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS07525 IPR006171 TOPRIM domain CYD28_RS07525 IPR018522 DNA topoisomerase, type IIA, conserved site CYD28_RS07525 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CYD28_RS07525 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal CYD28_RS07525 IPR013760 DNA topoisomerase, type IIA-like domain superfamily CYD28_RS07525 IPR001241 DNA topoisomerase, type IIA CYD28_RS07530 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY CYD28_RS07535 IPR008326 Uncharacterised conserved protein UCP034852 CYD28_RS07535 IPR035903 HesB-like domain superfamily CYD28_RS07540 IPR006683 Thioesterase domain CYD28_RS07540 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CYD28_RS07540 IPR029069 HotDog domain superfamily CYD28_RS07545 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain CYD28_RS07545 IPR036008 Aconitase, iron-sulfur domain CYD28_RS07545 IPR018136 Aconitase family, 4Fe-4S cluster binding site CYD28_RS07545 IPR006249 Aconitase/Iron-responsive element-binding protein 2 CYD28_RS07545 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CYD28_RS07545 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CYD28_RS07545 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain CYD28_RS07550 IPR018093 BCCT transporter, conserved site CYD28_RS07550 IPR000060 BCCT transporter family CYD28_RS07555 IPR001185 Large-conductance mechanosensitive channel CYD28_RS07555 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L CYD28_RS07555 IPR036019 Gated mechanosensitive channel CYD28_RS07555 IPR019823 Large-conductance mechanosensitive channel, conserved site CYD28_RS07560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS07560 IPR038729 Rad50/SbcC-type AAA domain CYD28_RS07565 IPR029052 Metallo-dependent phosphatase-like CYD28_RS07565 IPR004593 Nuclease SbcCD subunit D CYD28_RS07565 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain CYD28_RS07565 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CYD28_RS07570 IPR031306 CcdC protein CYD28_RS07580 IPR029061 Thiamin diphosphate-binding fold CYD28_RS07580 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CYD28_RS07580 IPR005474 Transketolase, N-terminal CYD28_RS07580 IPR005475 Transketolase-like, pyrimidine-binding domain CYD28_RS07580 IPR005478 Transketolase, bacterial-like CYD28_RS07580 IPR020826 Transketolase binding site CYD28_RS07580 IPR033248 Transketolase, C-terminal domain CYD28_RS07580 IPR033247 Transketolase family CYD28_RS07585 IPR009242 Protein of unknown function DUF896 CYD28_RS07595 IPR006200 Transcription regulator LexA CYD28_RS07595 IPR036286 LexA/Signal peptidase-like superfamily CYD28_RS07595 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS07595 IPR006199 LexA repressor, DNA-binding domain CYD28_RS07595 IPR011991 ArsR-like helix-turn-helix domain CYD28_RS07595 IPR006197 Peptidase S24, LexA-like CYD28_RS07595 IPR015927 Peptidase S24/S26A/S26B/S26C CYD28_RS07595 IPR039418 LexA-like CYD28_RS07595 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS07600 IPR035940 CAP superfamily CYD28_RS07600 IPR014044 CAP domain CYD28_RS07600 IPR029410 CAP-associated domain CYD28_RS07605 IPR013785 Aldolase-type TIM barrel CYD28_RS07605 IPR005994 Guanosine monophosphate reductase, type2 CYD28_RS07605 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CYD28_RS07605 IPR001093 IMP dehydrogenase/GMP reductase CYD28_RS07610 IPR018271 Ribosomal protein S14, conserved site CYD28_RS07610 IPR023036 Ribosomal protein S14, bacterial/plastid CYD28_RS07610 IPR001209 Ribosomal protein S14 CYD28_RS07615 IPR038584 Ribosomal protein L33 superfamily CYD28_RS07615 IPR001705 Ribosomal protein L33 CYD28_RS07615 IPR018264 Ribosomal protein L33, conserved site CYD28_RS07615 IPR011332 Zinc-binding ribosomal protein CYD28_RS07620 IPR002226 Catalase haem-binding site CYD28_RS07620 IPR010582 Catalase immune-responsive domain CYD28_RS07620 IPR020835 Catalase superfamily CYD28_RS07620 IPR037060 Catalase core domain superfamily CYD28_RS07620 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 CYD28_RS07620 IPR024708 Catalase active site CYD28_RS07620 IPR040333 Catalase, clade 3 CYD28_RS07620 IPR018028 Catalase, mono-functional, haem-containing CYD28_RS07620 IPR011614 Catalase core domain CYD28_RS07625 IPR004841 Amino acid permease/ SLC12A domain CYD28_RS07635 IPR006379 HAD-superfamily hydrolase, subfamily IIB CYD28_RS07635 IPR036412 HAD-like superfamily CYD28_RS07635 IPR000150 Cof family CYD28_RS07640 IPR036554 GHMP kinase, C-terminal domain superfamily CYD28_RS07640 IPR013750 GHMP kinase, C-terminal domain CYD28_RS07640 IPR006204 GHMP kinase N-terminal domain CYD28_RS07640 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS07640 IPR000870 Homoserine kinase CYD28_RS07640 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS07640 IPR006203 GHMP kinase, ATP-binding, conserved site CYD28_RS07645 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYD28_RS07645 IPR026260 Threonine synthase, bacterial/archaeal CYD28_RS07645 IPR004450 Threonine synthase-like CYD28_RS07645 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CYD28_RS07645 IPR001926 Pyridoxal-phosphate dependent enzyme CYD28_RS07650 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CYD28_RS07650 IPR002912 ACT domain CYD28_RS07650 IPR036291 NAD(P)-binding domain superfamily CYD28_RS07650 IPR019811 Homoserine dehydrogenase, conserved site CYD28_RS07650 IPR016204 Homoserine dehydrogenase CYD28_RS07650 IPR001342 Homoserine dehydrogenase, catalytic CYD28_RS07655 IPR035804 Aspartokinase 3, N-terminal CYD28_RS07655 IPR018042 Aspartate kinase, conserved site CYD28_RS07655 IPR001341 Aspartate kinase CYD28_RS07655 IPR005260 Aspartate kinase, monofunctional class CYD28_RS07655 IPR001048 Aspartate/glutamate/uridylate kinase CYD28_RS07655 IPR002912 ACT domain CYD28_RS07655 IPR036393 Acetylglutamate kinase-like superfamily CYD28_RS07655 IPR027795 CASTOR, ACT domain CYD28_RS07670 IPR002071 Thermonuclease active site CYD28_RS07670 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CYD28_RS07670 IPR035437 SNase-like, OB-fold superfamily CYD28_RS07685 IPR011006 CheY-like superfamily CYD28_RS07685 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS07685 IPR000792 Transcription regulator LuxR, C-terminal CYD28_RS07685 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS07685 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS07690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS07690 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS07690 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CYD28_RS07700 IPR003439 ABC transporter-like CYD28_RS07700 IPR017871 ABC transporter, conserved site CYD28_RS07700 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS07700 IPR003593 AAA+ ATPase domain CYD28_RS07705 IPR027379 Cardiolipin synthase N-terminal CYD28_RS07705 IPR030874 Cardiolipin synthase, Firmicutes-type CYD28_RS07705 IPR022924 Cardiolipin synthase CYD28_RS07705 IPR001736 Phospholipase D/Transphosphatidylase CYD28_RS07705 IPR025202 Phospholipase D-like domain CYD28_RS07775 IPR006480 Bacteriophage holin family CYD28_RS07810 IPR023346 Lysozyme-like domain superfamily CYD28_RS07810 IPR008258 Transglycosylase SLT domain 1 CYD28_RS07855 IPR033135 ClpP, histidine active site CYD28_RS07855 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CYD28_RS07855 IPR001907 ATP-dependent Clp protease proteolytic subunit CYD28_RS07855 IPR018215 ClpP, Ser active site CYD28_RS07855 IPR029045 ClpP/crotonase-like domain superfamily CYD28_RS07940 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS07940 IPR002611 IstB-like ATP-binding protein CYD28_RS07940 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CYD28_RS07965 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS07965 IPR000424 Primosome PriB/single-strand DNA-binding CYD28_RS07965 IPR011344 Single-stranded DNA-binding protein CYD28_RS08005 IPR001207 Transposase, mutator type CYD28_RS08025 IPR008146 Glutamine synthetase, catalytic domain CYD28_RS08025 IPR027303 Glutamine synthetase, glycine-rich site CYD28_RS08025 IPR036651 Glutamine synthetase, N-terminal domain superfamily CYD28_RS08025 IPR004809 Glutamine synthetase type I CYD28_RS08025 IPR008147 Glutamine synthetase, beta-Grasp domain CYD28_RS08025 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CYD28_RS08025 IPR027302 Glutamine synthetase, N-terminal conserved site CYD28_RS08030 IPR009061 Putative DNA-binding domain superfamily CYD28_RS08030 IPR000551 MerR-type HTH domain CYD28_RS08035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS08035 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS08035 IPR009651 Putative methionine gamma-lyase CYD28_RS08045 IPR029760 Glutathione peroxidase conserved site CYD28_RS08045 IPR000889 Glutathione peroxidase CYD28_RS08045 IPR036249 Thioredoxin-like superfamily CYD28_RS08050 IPR010920 LSM domain superfamily CYD28_RS08050 IPR005001 RNA-binding protein Hfq CYD28_RS08055 IPR039657 Dimethylallyltransferase CYD28_RS08055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08055 IPR018022 IPP transferase CYD28_RS08065 IPR031656 Alpha-glycerophosphate oxidase, C-terminal CYD28_RS08065 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily CYD28_RS08065 IPR006076 FAD dependent oxidoreductase CYD28_RS08065 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS08065 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase CYD28_RS08070 IPR005999 Glycerol kinase CYD28_RS08070 IPR000577 Carbohydrate kinase, FGGY CYD28_RS08070 IPR018485 Carbohydrate kinase, FGGY, C-terminal CYD28_RS08070 IPR018483 Carbohydrate kinase, FGGY, conserved site CYD28_RS08070 IPR018484 Carbohydrate kinase, FGGY, N-terminal CYD28_RS08075 IPR022357 Major intrinsic protein, conserved site CYD28_RS08075 IPR000425 Major intrinsic protein CYD28_RS08075 IPR023271 Aquaporin-like CYD28_RS08085 IPR014790 MutL, C-terminal, dimerisation CYD28_RS08085 IPR013507 DNA mismatch repair protein, S5 domain 2-like CYD28_RS08085 IPR002099 DNA mismatch repair protein family, N-terminal CYD28_RS08085 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS08085 IPR020667 DNA mismatch repair protein, MutL CYD28_RS08085 IPR037198 MutL, C-terminal domain superfamily CYD28_RS08085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS08085 IPR014762 DNA mismatch repair, conserved site CYD28_RS08085 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS08085 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms CYD28_RS08085 IPR042121 MutL, C-terminal domain, regulatory subdomain CYD28_RS08085 IPR042120 MutL, C-terminal domain, dimerisation subdomain CYD28_RS08090 IPR016151 DNA mismatch repair protein MutS, N-terminal CYD28_RS08090 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CYD28_RS08090 IPR007860 DNA mismatch repair protein MutS, connector domain CYD28_RS08090 IPR007696 DNA mismatch repair protein MutS, core CYD28_RS08090 IPR007861 DNA mismatch repair protein MutS, clamp CYD28_RS08090 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CYD28_RS08090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08090 IPR017261 DNA mismatch repair protein MutS/MSH CYD28_RS08090 IPR000432 DNA mismatch repair protein MutS, C-terminal CYD28_RS08090 IPR005748 DNA mismatch repair protein MutS CYD28_RS08090 IPR036678 MutS, connector domain superfamily CYD28_RS08100 IPR023378 YheA/YmcA-like domain superfamily CYD28_RS08100 IPR010368 Control of competence regulator ComK, YlbF/YmcA CYD28_RS08100 IPR016783 Biofilm formation YmcA CYD28_RS08105 IPR006638 Elp3/MiaB/NifB CYD28_RS08105 IPR007197 Radical SAM CYD28_RS08105 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB CYD28_RS08105 IPR013848 Methylthiotransferase, N-terminal CYD28_RS08105 IPR038135 Methylthiotransferase, N-terminal domain superfamily CYD28_RS08105 IPR002792 TRAM domain CYD28_RS08105 IPR023404 Radical SAM, alpha/beta horseshoe CYD28_RS08105 IPR005839 Methylthiotransferase CYD28_RS08105 IPR020612 Methylthiotransferase, conserved site CYD28_RS08115 IPR038128 Poly-gamma-glutamate hydrolase superfamily CYD28_RS08115 IPR008585 Poly-gamma-glutamate hydrolase CYD28_RS08120 IPR029061 Thiamin diphosphate-binding fold CYD28_RS08120 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CYD28_RS08125 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CYD28_RS08125 IPR029061 Thiamin diphosphate-binding fold CYD28_RS08125 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit CYD28_RS08125 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CYD28_RS08125 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CYD28_RS08125 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CYD28_RS08125 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CYD28_RS08130 IPR029052 Metallo-dependent phosphatase-like CYD28_RS08130 IPR005235 Metallophosphoesterase, YmdB-like CYD28_RS08140 IPR006675 HDIG domain CYD28_RS08140 IPR006674 HD domain CYD28_RS08140 IPR004088 K Homology domain, type 1 CYD28_RS08140 IPR036612 K Homology domain, type 1 superfamily CYD28_RS08140 IPR017705 Ribonuclease Y CYD28_RS08140 IPR022711 Ribonuclease Y, N-terminal CYD28_RS08140 IPR004087 K Homology domain CYD28_RS08140 IPR003607 HD/PDEase domain CYD28_RS08145 IPR001207 Transposase, mutator type CYD28_RS08150 IPR011009 Protein kinase-like domain superfamily CYD28_RS08150 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS08150 IPR002575 Aminoglycoside phosphotransferase CYD28_RS08150 IPR000182 GNAT domain CYD28_RS08155 IPR006464 N-acetyltransferase RimI/Ard1 CYD28_RS08155 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS08155 IPR000182 GNAT domain CYD28_RS08160 IPR001207 Transposase, mutator type CYD28_RS08165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08165 IPR023400 DNA recombination and repair protein RecA, C-terminal CYD28_RS08165 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface CYD28_RS08165 IPR003593 AAA+ ATPase domain CYD28_RS08165 IPR020584 DNA recombination/repair protein RecA, conserved site CYD28_RS08165 IPR013765 DNA recombination and repair protein RecA CYD28_RS08165 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CYD28_RS08170 IPR001453 MoaB/Mog domain CYD28_RS08170 IPR036425 MoaB/Mog-like domain superfamily CYD28_RS08170 IPR008135 Competence-induced protein CinA CYD28_RS08170 IPR041424 CinA, KH domain CYD28_RS08170 IPR008136 CinA, C-terminal CYD28_RS08170 IPR036653 CinA-like, C-terminal CYD28_RS08175 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CYD28_RS08175 IPR000462 CDP-alcohol phosphatidyltransferase CYD28_RS08185 IPR002912 ACT domain CYD28_RS08185 IPR024514 Domain of unknown function DUF3388 CYD28_RS08185 IPR016784 Uncharacterised protein UCP021288 with ACT domain CYD28_RS08190 IPR036291 NAD(P)-binding domain superfamily CYD28_RS08190 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS08195 IPR011765 Peptidase M16, N-terminal CYD28_RS08195 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CYD28_RS08195 IPR007863 Peptidase M16, C-terminal CYD28_RS08200 IPR007863 Peptidase M16, C-terminal CYD28_RS08200 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CYD28_RS08205 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CYD28_RS08205 IPR011663 UbiC transcription regulator-associated CYD28_RS08205 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS08205 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS08205 IPR000524 Transcription regulator HTH, GntR CYD28_RS08210 IPR003593 AAA+ ATPase domain CYD28_RS08210 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08210 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS08210 IPR041027 FtsK alpha domain CYD28_RS08210 IPR002543 FtsK domain CYD28_RS08210 IPR018541 FtsK gamma domain CYD28_RS08210 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS08210 IPR036259 MFS transporter superfamily CYD28_RS08215 IPR004613 Ribonuclease J CYD28_RS08215 IPR041636 Ribonuclease J, C-terminal CYD28_RS08215 IPR030854 Ribonuclease J, bacteria CYD28_RS08215 IPR042173 Ribonuclease J, domain 2 CYD28_RS08215 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CYD28_RS08215 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CYD28_RS08215 IPR001279 Metallo-beta-lactamase CYD28_RS08220 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CYD28_RS08220 IPR003029 S1 domain CYD28_RS08220 IPR027408 PNPase/RNase PH domain superfamily CYD28_RS08220 IPR022967 RNA-binding domain, S1 CYD28_RS08220 IPR036612 K Homology domain, type 1 superfamily CYD28_RS08220 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS08220 IPR036345 Exoribonuclease, PH domain 2 superfamily CYD28_RS08220 IPR004087 K Homology domain CYD28_RS08220 IPR004088 K Homology domain, type 1 CYD28_RS08220 IPR012162 Polyribonucleotide nucleotidyltransferase CYD28_RS08220 IPR015847 Exoribonuclease, phosphorolytic domain 2 CYD28_RS08220 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily CYD28_RS08220 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS08220 IPR001247 Exoribonuclease, phosphorolytic domain 1 CYD28_RS08225 IPR005290 Ribosomal protein S15, bacterial-type CYD28_RS08225 IPR009068 S15/NS1, RNA-binding CYD28_RS08225 IPR000589 Ribosomal protein S15 CYD28_RS08230 IPR004821 Cytidyltransferase-like domain CYD28_RS08230 IPR015864 FAD synthetase CYD28_RS08230 IPR023468 Riboflavin kinase CYD28_RS08230 IPR002606 Riboflavin kinase, bacterial CYD28_RS08230 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CYD28_RS08230 IPR023465 Riboflavin kinase domain superfamily CYD28_RS08230 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS08235 IPR020103 Pseudouridine synthase, catalytic domain superfamily CYD28_RS08235 IPR032819 tRNA pseudouridylate synthase B, C-terminal CYD28_RS08235 IPR002501 Pseudouridine synthase II, N-terminal CYD28_RS08235 IPR014780 tRNA pseudouridine synthase II, TruB CYD28_RS08240 IPR015946 K homology domain-like, alpha/beta CYD28_RS08240 IPR020053 Ribosome-binding factor A, conserved site CYD28_RS08240 IPR023799 Ribosome-binding factor A domain superfamily CYD28_RS08240 IPR000238 Ribosome-binding factor A CYD28_RS08245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08245 IPR005225 Small GTP-binding protein domain CYD28_RS08245 IPR000795 Transcription factor, GTP-binding domain CYD28_RS08245 IPR009000 Translation protein, beta-barrel domain superfamily CYD28_RS08245 IPR036925 Translation initiation factor IF-2, domain 3 superfamily CYD28_RS08245 IPR023115 Translation initiation factor IF- 2, domain 3 CYD28_RS08245 IPR015760 Translation initiation factor IF- 2 CYD28_RS08245 IPR000178 Translation initiation factor aIF-2, bacterial-like CYD28_RS08245 IPR006847 Translation initiation factor IF-2, N-terminal CYD28_RS08250 IPR004037 Ribosomal protein L7Ae conserved site CYD28_RS08250 IPR039107 Ribosomal protein YlxQ CYD28_RS08250 IPR039109 Ribosomal protein L30/YlxQ CYD28_RS08250 IPR029064 50S ribosomal protein L30e-like CYD28_RS08250 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CYD28_RS08255 IPR007393 Domain of unknown function DUF448 CYD28_RS08255 IPR037465 Uncharacterized protein YlxR CYD28_RS08255 IPR035931 YlxR-like superfamily CYD28_RS08260 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS08260 IPR009019 K homology domain superfamily, prokaryotic type CYD28_RS08260 IPR004087 K Homology domain CYD28_RS08260 IPR025249 KH domain, NusA-like CYD28_RS08260 IPR030842 Transcription termination/antitermination protein NusA, bacterial CYD28_RS08260 IPR036555 NusA, N-terminal domain superfamily CYD28_RS08260 IPR022967 RNA-binding domain, S1 CYD28_RS08260 IPR003029 S1 domain CYD28_RS08260 IPR013735 Transcription factor NusA, N-terminal CYD28_RS08260 IPR010213 Transcription termination factor NusA CYD28_RS08260 IPR015946 K homology domain-like, alpha/beta CYD28_RS08265 IPR035956 RimP, N-terminal domain superfamily CYD28_RS08265 IPR028989 Ribosome maturation factor RimP, N-terminal CYD28_RS08265 IPR003728 Ribosome maturation factor RimP CYD28_RS08265 IPR028998 Ribosome maturation factor RimP, C-terminal CYD28_RS08265 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily CYD28_RS08270 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type CYD28_RS08270 IPR003141 Polymerase/histidinol phosphatase, N-terminal CYD28_RS08270 IPR004013 PHP domain CYD28_RS08270 IPR013520 Exonuclease, RNase T/DNA polymerase III CYD28_RS08270 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain CYD28_RS08270 IPR012337 Ribonuclease H-like superfamily CYD28_RS08270 IPR036397 Ribonuclease H superfamily CYD28_RS08270 IPR029460 DNA polymerase, helix-hairpin-helix motif CYD28_RS08270 IPR028112 DNA polymerase III polC-type, N-terminal domain I CYD28_RS08270 IPR040982 DNA polymerase III alpha subunit finger domain CYD28_RS08270 IPR024754 DNA polymerase III polC-like, N-terminal domain II CYD28_RS08270 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain CYD28_RS08275 IPR006195 Aminoacyl-tRNA synthetase, class II CYD28_RS08275 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 CYD28_RS08275 IPR033730 Prokaryote proline-tRNA ligase core domain CYD28_RS08275 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CYD28_RS08275 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CYD28_RS08275 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type CYD28_RS08275 IPR002316 Proline-tRNA ligase, class IIa CYD28_RS08275 IPR004154 Anticodon-binding CYD28_RS08275 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) CYD28_RS08275 IPR036621 Anticodon-binding domain superfamily CYD28_RS08280 IPR001478 PDZ domain CYD28_RS08280 IPR036034 PDZ superfamily CYD28_RS08280 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CYD28_RS08280 IPR008915 Peptidase M50 CYD28_RS08285 IPR000374 Phosphatidate cytidylyltransferase CYD28_RS08290 IPR001441 Decaprenyl diphosphate synthase-like CYD28_RS08290 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CYD28_RS08290 IPR036424 Decaprenyl diphosphate synthase-like superfamily CYD28_RS08295 IPR002661 Ribosome recycling factor CYD28_RS08295 IPR036191 RRF superfamily CYD28_RS08295 IPR023584 Ribosome recycling factor domain CYD28_RS08300 IPR036393 Acetylglutamate kinase-like superfamily CYD28_RS08300 IPR001048 Aspartate/glutamate/uridylate kinase CYD28_RS08300 IPR015963 Uridylate kinase, bacteria CYD28_RS08300 IPR011817 Uridylate kinase CYD28_RS08305 IPR009060 UBA-like superfamily CYD28_RS08305 IPR036402 Elongation factor Ts, dimerisation domain superfamily CYD28_RS08305 IPR018101 Translation elongation factor Ts, conserved site CYD28_RS08305 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CYD28_RS08305 IPR001816 Translation elongation factor EFTs/EF1B CYD28_RS08310 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily CYD28_RS08310 IPR018130 Ribosomal protein S2, conserved site CYD28_RS08310 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CYD28_RS08310 IPR001865 Ribosomal protein S2 CYD28_RS08315 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY CYD28_RS08315 IPR029016 GAF-like domain superfamily CYD28_RS08315 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal CYD28_RS08315 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS08315 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal CYD28_RS08315 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS08320 IPR003959 ATPase, AAA-type, core CYD28_RS08320 IPR004491 Heat shock protein HslU CYD28_RS08320 IPR019489 Clp ATPase, C-terminal CYD28_RS08320 IPR003593 AAA+ ATPase domain CYD28_RS08320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08325 IPR001353 Proteasome, subunit alpha/beta CYD28_RS08325 IPR029055 Nucleophile aminohydrolases, N-terminal CYD28_RS08325 IPR023333 Proteasome B-type subunit CYD28_RS08325 IPR022281 ATP-dependent protease, HslV subunit CYD28_RS08330 IPR011010 DNA breaking-rejoining enzyme, catalytic core CYD28_RS08330 IPR002104 Integrase, catalytic domain CYD28_RS08330 IPR010998 Integrase/recombinase, N-terminal CYD28_RS08330 IPR013762 Integrase-like, catalytic domain superfamily CYD28_RS08330 IPR023009 Tyrosine recombinase XerC/XerD CYD28_RS08330 IPR004107 Integrase, SAM-like, N-terminal CYD28_RS08330 IPR011931 Tyrosine recombinase XerC CYD28_RS08335 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CYD28_RS08335 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS08335 IPR020595 MnmG-related, conserved site CYD28_RS08335 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO CYD28_RS08340 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CYD28_RS08340 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 CYD28_RS08340 IPR023405 DNA topoisomerase, type IA, core domain CYD28_RS08340 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CYD28_RS08340 IPR013498 DNA topoisomerase, type IA, zn finger CYD28_RS08340 IPR005733 DNA topoisomerase I, bacterial-type CYD28_RS08340 IPR023406 DNA topoisomerase, type IA, active site CYD28_RS08340 IPR028612 DNA topoisomerase I, type IA CYD28_RS08340 IPR006171 TOPRIM domain CYD28_RS08340 IPR034149 DNA topoisomerase 1, TOPRIM domain CYD28_RS08340 IPR013497 DNA topoisomerase, type IA, central CYD28_RS08340 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CYD28_RS08340 IPR000380 DNA topoisomerase, type IA CYD28_RS08340 IPR003601 DNA topoisomerase, type IA, domain 2 CYD28_RS08345 IPR003488 DNA recombination-mediator protein A CYD28_RS08350 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS08350 IPR003447 FemABX peptidyl transferase CYD28_RS08350 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CYD28_RS08355 IPR016102 Succinyl-CoA synthetase-like CYD28_RS08355 IPR003781 CoA-binding CYD28_RS08355 IPR005810 Succinyl-CoA ligase, alpha subunit CYD28_RS08355 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CYD28_RS08355 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CYD28_RS08355 IPR036291 NAD(P)-binding domain superfamily CYD28_RS08355 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CYD28_RS08360 IPR005809 Succinate--CoA synthetase, beta subunit CYD28_RS08360 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site CYD28_RS08360 IPR013815 ATP-grasp fold, subdomain 1 CYD28_RS08360 IPR005811 ATP-citrate lyase/succinyl-CoA ligase CYD28_RS08360 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type CYD28_RS08360 IPR011761 ATP-grasp fold CYD28_RS08360 IPR016102 Succinyl-CoA synthetase-like CYD28_RS08365 IPR036397 Ribonuclease H superfamily CYD28_RS08365 IPR012337 Ribonuclease H-like superfamily CYD28_RS08365 IPR001352 Ribonuclease HII/HIII CYD28_RS08365 IPR022898 Ribonuclease HII CYD28_RS08365 IPR024567 Ribonuclease HII/HIII domain CYD28_RS08370 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CYD28_RS08370 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily CYD28_RS08370 IPR019991 GTP-binding protein, ribosome biogenesis CYD28_RS08370 IPR016478 GTPase, MTG1 CYD28_RS08370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08370 IPR006073 GTP binding domain CYD28_RS08375 IPR018580 Uncharacterised protein family YfhO CYD28_RS08385 IPR008991 Translation protein SH3-like domain superfamily CYD28_RS08385 IPR018257 Ribosomal protein L19, conserved site CYD28_RS08385 IPR001857 Ribosomal protein L19 CYD28_RS08385 IPR038657 Ribosomal protein L19 superfamily CYD28_RS08390 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CYD28_RS08390 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CYD28_RS08390 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CYD28_RS08390 IPR029028 Alpha/beta knot methyltransferases CYD28_RS08390 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYD28_RS08395 IPR027275 PRC-barrel domain CYD28_RS08395 IPR011033 PRC-barrel-like superfamily CYD28_RS08395 IPR002676 RimM, N-terminal CYD28_RS08395 IPR036976 RimM, N-terminal domain superfamily CYD28_RS08395 IPR011961 16S rRNA processing protein RimM CYD28_RS08395 IPR009000 Translation protein, beta-barrel domain superfamily CYD28_RS08400 IPR000307 Ribosomal protein S16 CYD28_RS08400 IPR023803 Ribosomal protein S16 domain superfamily CYD28_RS08405 IPR004780 Signal recognition particle protein CYD28_RS08405 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CYD28_RS08405 IPR013822 Signal recognition particle SRP54, helical bundle CYD28_RS08405 IPR003593 AAA+ ATPase domain CYD28_RS08405 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CYD28_RS08405 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CYD28_RS08405 IPR022941 Signal recognition particle, SRP54 subunit CYD28_RS08405 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily CYD28_RS08405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08410 IPR013324 RNA polymerase sigma factor, region 3/4-like CYD28_RS08410 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS08410 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like CYD28_RS08415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08415 IPR003593 AAA+ ATPase domain CYD28_RS08415 IPR013822 Signal recognition particle SRP54, helical bundle CYD28_RS08415 IPR036225 SRP/SRP receptor, N-terminal CYD28_RS08415 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CYD28_RS08415 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily CYD28_RS08415 IPR004390 Signal-recognition particle receptor FtsY CYD28_RS08420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08420 IPR003395 RecF/RecN/SMC, N-terminal CYD28_RS08420 IPR024704 Structural maintenance of chromosomes protein CYD28_RS08420 IPR010935 SMCs flexible hinge CYD28_RS08420 IPR036277 SMCs flexible hinge superfamily CYD28_RS08420 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CYD28_RS08425 IPR014720 Double-stranded RNA-binding domain CYD28_RS08425 IPR011907 Ribonuclease III CYD28_RS08425 IPR000999 Ribonuclease III domain CYD28_RS08425 IPR036389 Ribonuclease III, endonuclease domain superfamily CYD28_RS08430 IPR003231 Acyl carrier protein (ACP) CYD28_RS08430 IPR036736 ACP-like superfamily CYD28_RS08430 IPR006162 Phosphopantetheine attachment site CYD28_RS08430 IPR009081 Phosphopantetheine binding ACP domain CYD28_RS08435 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CYD28_RS08435 IPR036291 NAD(P)-binding domain superfamily CYD28_RS08435 IPR020904 Short-chain dehydrogenase/reductase, conserved site CYD28_RS08435 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS08440 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CYD28_RS08440 IPR001227 Acyl transferase domain superfamily CYD28_RS08440 IPR024925 Malonyl CoA-acyl carrier protein transacylase CYD28_RS08440 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CYD28_RS08440 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CYD28_RS08440 IPR014043 Acyl transferase CYD28_RS08445 IPR003664 Fatty acid synthesis PlsX protein CYD28_RS08445 IPR012281 Phospholipid biosynthesis protein, PlsX-like CYD28_RS08450 IPR002539 MaoC-like dehydratase domain CYD28_RS08450 IPR017275 Transcription factor FapR CYD28_RS08450 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS08450 IPR029069 HotDog domain superfamily CYD28_RS08455 IPR004609 ATP-dependent DNA helicase RecG CYD28_RS08455 IPR011545 DEAD/DEAH box helicase domain CYD28_RS08455 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYD28_RS08455 IPR001650 Helicase, C-terminal CYD28_RS08455 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS08455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08455 IPR033454 RecG, wedge domain CYD28_RS08460 IPR002071 Thermonuclease active site CYD28_RS08460 IPR035437 SNase-like, OB-fold superfamily CYD28_RS08460 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CYD28_RS08465 IPR019986 DAK2 domain-containing protein YloV CYD28_RS08465 IPR004007 DhaL domain CYD28_RS08465 IPR036117 DhaL domain superfamily CYD28_RS08465 IPR033470 Uncharacterised protein, DhaK domain CYD28_RS08470 IPR005531 Alkaline shock protein Asp23 CYD28_RS08475 IPR001383 Ribosomal protein L28 CYD28_RS08475 IPR037147 Ribosomal protein L28/L24 superfamily CYD28_RS08475 IPR026569 Ribosomal protein L28/L24 CYD28_RS08475 IPR034704 L28p-like CYD28_RS08480 IPR006282 Thiamin pyrophosphokinase CYD28_RS08480 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain CYD28_RS08480 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily CYD28_RS08480 IPR007371 Thiamin pyrophosphokinase, catalytic domain CYD28_RS08480 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily CYD28_RS08485 IPR026019 Ribulose-phosphate 3-epimerase CYD28_RS08485 IPR011060 Ribulose-phosphate binding barrel CYD28_RS08485 IPR000056 Ribulose-phosphate 3-epimerase-like CYD28_RS08485 IPR013785 Aldolase-type TIM barrel CYD28_RS08490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08490 IPR004881 Ribosome biogenesis GTPase RsgA CYD28_RS08490 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS08490 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain CYD28_RS08490 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal CYD28_RS08490 IPR010914 RsgA GTPase domain CYD28_RS08495 IPR005543 PASTA domain CYD28_RS08495 IPR000719 Protein kinase domain CYD28_RS08495 IPR017441 Protein kinase, ATP binding site CYD28_RS08495 IPR008271 Serine/threonine-protein kinase, active site CYD28_RS08495 IPR011009 Protein kinase-like domain superfamily CYD28_RS08500 IPR036457 PPM-type phosphatase domain superfamily CYD28_RS08500 IPR001932 PPM-type phosphatase domain CYD28_RS08500 IPR015655 Protein phosphatase 2C family CYD28_RS08505 IPR040072 Methyltransferase (Class A) CYD28_RS08505 IPR007197 Radical SAM CYD28_RS08505 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CYD28_RS08505 IPR027492 Dual-specificity RNA methyltransferase RlmN CYD28_RS08505 IPR013785 Aldolase-type TIM barrel CYD28_RS08510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS08510 IPR004573 rRNA small subunit methyltransferase B CYD28_RS08510 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site CYD28_RS08510 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type CYD28_RS08510 IPR035926 NusB-like superfamily CYD28_RS08510 IPR023267 RNA (C5-cytosine) methyltransferase CYD28_RS08510 IPR006027 NusB/RsmB/TIM44 CYD28_RS08515 IPR037022 Formyl transferase, C-terminal domain superfamily CYD28_RS08515 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain CYD28_RS08515 IPR002376 Formyl transferase, N-terminal CYD28_RS08515 IPR011034 Formyl transferase-like, C-terminal domain superfamily CYD28_RS08515 IPR005794 Methionyl-tRNA formyltransferase CYD28_RS08515 IPR005793 Formyl transferase, C-terminal CYD28_RS08515 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CYD28_RS08515 IPR036477 Formyl transferase, N-terminal domain superfamily CYD28_RS08520 IPR023635 Peptide deformylase CYD28_RS08520 IPR036821 Peptide deformylase superfamily CYD28_RS08530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08530 IPR041222 Primosomal protein N', 3' DNA-binding domain CYD28_RS08530 IPR005259 Primosomal protein N' CYD28_RS08530 IPR001650 Helicase, C-terminal CYD28_RS08530 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYD28_RS08530 IPR006935 Helicase/UvrB, N-terminal CYD28_RS08530 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily CYD28_RS08530 IPR041236 Primosomal protein N, C-terminal domain CYD28_RS08530 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain CYD28_RS08535 IPR036551 Flavin prenyltransferase-like CYD28_RS08535 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CYD28_RS08535 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CYD28_RS08535 IPR035929 CoaB-like superfamily CYD28_RS08535 IPR003382 Flavoprotein CYD28_RS08540 IPR012293 RNA polymerase subunit, RPB6/omega CYD28_RS08540 IPR003716 DNA-directed RNA polymerase, omega subunit CYD28_RS08540 IPR006110 RNA polymerase, subunit omega/K/RPB6 CYD28_RS08540 IPR036161 RPB6/omega subunit-like superfamily CYD28_RS08545 IPR017665 Guanylate kinase CYD28_RS08545 IPR008144 Guanylate kinase-like domain CYD28_RS08545 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08545 IPR020590 Guanylate kinase, conserved site CYD28_RS08545 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CYD28_RS08565 IPR023031 Orotate phosphoribosyltransferase CYD28_RS08565 IPR004467 Orotate phosphoribosyl transferase domain CYD28_RS08565 IPR000836 Phosphoribosyltransferase domain CYD28_RS08565 IPR029057 Phosphoribosyltransferase-like CYD28_RS08570 IPR011060 Ribulose-phosphate binding barrel CYD28_RS08570 IPR001754 Orotidine 5'-phosphate decarboxylase domain CYD28_RS08570 IPR018089 Orotidine 5'-phosphate decarboxylase, active site CYD28_RS08570 IPR014732 Orotidine 5'-phosphate decarboxylase CYD28_RS08570 IPR013785 Aldolase-type TIM barrel CYD28_RS08575 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CYD28_RS08575 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily CYD28_RS08575 IPR016185 Pre-ATP-grasp domain superfamily CYD28_RS08575 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CYD28_RS08575 IPR006275 Carbamoyl-phosphate synthase, large subunit CYD28_RS08575 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain CYD28_RS08575 IPR036914 Methylglyoxal synthase-like domain superfamily CYD28_RS08575 IPR011607 Methylglyoxal synthase-like domain CYD28_RS08575 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CYD28_RS08575 IPR011761 ATP-grasp fold CYD28_RS08580 IPR006274 Carbamoyl-phosphate synthase, small subunit CYD28_RS08580 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily CYD28_RS08580 IPR029062 Class I glutamine amidotransferase-like CYD28_RS08580 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain CYD28_RS08580 IPR017926 Glutamine amidotransferase CYD28_RS08580 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain CYD28_RS08585 IPR004722 Dihydroorotase CYD28_RS08585 IPR002195 Dihydroorotase, conserved site CYD28_RS08585 IPR011059 Metal-dependent hydrolase, composite domain superfamily CYD28_RS08585 IPR032466 Metal-dependent hydrolase CYD28_RS08585 IPR006680 Amidohydrolase-related CYD28_RS08590 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CYD28_RS08590 IPR006130 Aspartate/ornithine carbamoyltransferase CYD28_RS08590 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily CYD28_RS08590 IPR002082 Aspartate carbamoyltransferase CYD28_RS08590 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CYD28_RS08595 IPR006042 Xanthine/uracil permease CYD28_RS08595 IPR029935 Uracil permease CYD28_RS08595 IPR006043 Xanthine/uracil/vitamin C permease CYD28_RS08600 IPR023050 Bifunctional protein PyrR CYD28_RS08600 IPR000836 Phosphoribosyltransferase domain CYD28_RS08600 IPR029057 Phosphoribosyltransferase-like CYD28_RS08605 IPR020103 Pseudouridine synthase, catalytic domain superfamily CYD28_RS08605 IPR006225 Pseudouridine synthase, RluC/RluD CYD28_RS08605 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CYD28_RS08605 IPR006145 Pseudouridine synthase, RsuA/RluA CYD28_RS08605 IPR002942 RNA-binding S4 domain CYD28_RS08605 IPR036986 RNA-binding S4 domain superfamily CYD28_RS08610 IPR001872 Peptidase A8, signal peptidase II CYD28_RS08615 IPR038765 Papain-like cysteine peptidase superfamily CYD28_RS08615 IPR036779 LysM domain superfamily CYD28_RS08615 IPR018392 LysM domain CYD28_RS08615 IPR007921 CHAP domain CYD28_RS08625 IPR021295 Protein of unknown function DUF2867 CYD28_RS08625 IPR016040 NAD(P)-binding domain CYD28_RS08625 IPR036291 NAD(P)-binding domain superfamily CYD28_RS08630 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CYD28_RS08630 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CYD28_RS08630 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CYD28_RS08630 IPR010663 Zinc finger, FPG/IleRS-type CYD28_RS08630 IPR023585 Isoleucine-tRNA ligase, type 1 CYD28_RS08630 IPR002301 Isoleucine-tRNA ligase CYD28_RS08630 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain CYD28_RS08630 IPR002300 Aminoacyl-tRNA synthetase, class Ia CYD28_RS08630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS08630 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CYD28_RS08635 IPR019933 DivIVA domain CYD28_RS08635 IPR007793 DivIVA family CYD28_RS08645 IPR003425 CCB3/YggT CYD28_RS08650 IPR038594 SepF-like superfamily CYD28_RS08650 IPR007561 Cell division protein SepF/SepF-related CYD28_RS08650 IPR023052 Cell division protein SepF CYD28_RS08655 IPR001608 Alanine racemase, N-terminal CYD28_RS08655 IPR029066 PLP-binding barrel CYD28_RS08655 IPR011078 Pyridoxal phosphate homeostasis protein CYD28_RS08665 IPR003008 Tubulin/FtsZ, GTPase domain CYD28_RS08665 IPR036525 Tubulin/FtsZ, GTPase domain superfamily CYD28_RS08665 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily CYD28_RS08665 IPR000158 Cell division protein FtsZ CYD28_RS08665 IPR020805 Cell division protein FtsZ, conserved site CYD28_RS08665 IPR024757 Cell division protein FtsZ, C-terminal CYD28_RS08665 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CYD28_RS08665 IPR008280 Tubulin/FtsZ, C-terminal CYD28_RS08670 IPR003494 SHS2 domain inserted in FtsA CYD28_RS08670 IPR020823 Cell division protein FtsA CYD28_RS08675 IPR005548 Cell division protein FtsQ/DivIB CYD28_RS08675 IPR034746 POTRA domain CYD28_RS08675 IPR026580 Cell division protein DivIB CYD28_RS08675 IPR013685 POTRA domain, FtsQ-type CYD28_RS08680 IPR036565 Mur-like, catalytic domain superfamily CYD28_RS08680 IPR004101 Mur ligase, C-terminal CYD28_RS08680 IPR036615 Mur ligase, C-terminal domain superfamily CYD28_RS08680 IPR013221 Mur ligase, central CYD28_RS08680 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CYD28_RS08685 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CYD28_RS08685 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CYD28_RS08685 IPR000715 Glycosyl transferase, family 4 CYD28_RS08695 IPR007060 Septum formation initiator FtsL/DivIC CYD28_RS08695 IPR011922 Cell division protein FtsL CYD28_RS08700 IPR002903 Ribosomal RNA small subunit methyltransferase H CYD28_RS08700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS08700 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily CYD28_RS08705 IPR037914 SpoVT-AbrB domain superfamily CYD28_RS08705 IPR038619 MraZ superfamily CYD28_RS08705 IPR035642 MraZ, N-terminal CYD28_RS08705 IPR020603 MraZ domain CYD28_RS08705 IPR035644 MraZ, C-terminal CYD28_RS08705 IPR003444 Transcriptional regulator MraZ CYD28_RS08705 IPR007159 SpoVT-AbrB domain CYD28_RS08710 IPR011199 Bacillithiol biosynthesis BshC CYD28_RS08715 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS08715 IPR017274 Putative N-acetyltransferase YlbP CYD28_RS08720 IPR006439 HAD hydrolase, subfamily IA CYD28_RS08720 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB CYD28_RS08720 IPR041492 Haloacid dehalogenase-like hydrolase CYD28_RS08720 IPR036412 HAD-like superfamily CYD28_RS08720 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CYD28_RS08720 IPR023214 HAD superfamily CYD28_RS08725 IPR008846 Staphylococcal hemolytic protein family CYD28_RS08730 IPR008846 Staphylococcal hemolytic protein family CYD28_RS08735 IPR008846 Staphylococcal hemolytic protein family CYD28_RS08740 IPR008846 Staphylococcal hemolytic protein family CYD28_RS08745 IPR008846 Staphylococcal hemolytic protein family CYD28_RS08755 IPR000979 Phosphodiesterase MJ0936/Vps29 CYD28_RS08755 IPR020935 Phosphodiesterase YfcE, conserved site CYD28_RS08755 IPR029052 Metallo-dependent phosphatase-like CYD28_RS08755 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type CYD28_RS08760 IPR029001 Inosine triphosphate pyrophosphatase-like CYD28_RS08760 IPR020922 dITP/XTP pyrophosphatase CYD28_RS08760 IPR002637 Ham1-like protein CYD28_RS08765 IPR015942 Asp/Glu/hydantoin racemase CYD28_RS08765 IPR033134 Asp/Glu racemase, active site 2 CYD28_RS08765 IPR001920 Asp/Glu racemase CYD28_RS08765 IPR018187 Asp/Glu racemase, active site 1 CYD28_RS08765 IPR004391 Glutamate racemase CYD28_RS08770 IPR036010 2Fe-2S ferredoxin-like superfamily CYD28_RS08770 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CYD28_RS08770 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CYD28_RS08770 IPR009051 Alpha-helical ferredoxin CYD28_RS08770 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein CYD28_RS08770 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal CYD28_RS08770 IPR012675 Beta-grasp domain superfamily CYD28_RS08775 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain CYD28_RS08775 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily CYD28_RS08775 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS08775 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site CYD28_RS08775 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily CYD28_RS08775 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal CYD28_RS08775 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria CYD28_RS08780 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit CYD28_RS08780 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit CYD28_RS08780 IPR011138 Succinate dehydrogenase cytochrome b558 subunit CYD28_RS08780 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute CYD28_RS08785 IPR000305 GIY-YIG endonuclease CYD28_RS08785 IPR035901 GIY-YIG endonuclease superfamily CYD28_RS08785 IPR004791 UvrABC system, subunit C CYD28_RS08785 IPR010994 RuvA domain 2-like CYD28_RS08785 IPR001943 UVR domain CYD28_RS08785 IPR036876 UVR domain superfamily CYD28_RS08785 IPR001162 UvrC family homology region CYD28_RS08785 IPR038476 UvrC homology region 2 superfamily CYD28_RS08790 IPR013766 Thioredoxin domain CYD28_RS08790 IPR005746 Thioredoxin CYD28_RS08790 IPR036249 Thioredoxin-like superfamily CYD28_RS08790 IPR017937 Thioredoxin, conserved site CYD28_RS08795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08795 IPR005747 Endonuclease MutS2 CYD28_RS08795 IPR036187 DNA mismatch repair protein MutS, core domain superfamily CYD28_RS08795 IPR007696 DNA mismatch repair protein MutS, core CYD28_RS08795 IPR000432 DNA mismatch repair protein MutS, C-terminal CYD28_RS08795 IPR002625 Smr domain CYD28_RS08795 IPR036063 Smr domain superfamily CYD28_RS08800 IPR002054 DNA-directed DNA polymerase X CYD28_RS08800 IPR022311 Uncharacterised conserved protein UCP005047, YshC CYD28_RS08800 IPR010996 DNA polymerase beta-like, N-terminal domain CYD28_RS08800 IPR027421 DNA polymerase lambda lyase domain superfamily CYD28_RS08800 IPR037160 DNA polymerase, thumb domain superfamily CYD28_RS08800 IPR029398 DNA polymerase beta, thumb domain CYD28_RS08800 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CYD28_RS08800 IPR016195 Polymerase/histidinol phosphatase-like CYD28_RS08800 IPR003141 Polymerase/histidinol phosphatase, N-terminal CYD28_RS08800 IPR004013 PHP domain CYD28_RS08810 IPR036192 Cell division protein ZapA-like superfamily CYD28_RS08810 IPR023688 Cell division protein ZapA, firmicutes CYD28_RS08810 IPR007838 Cell division protein ZapA-like CYD28_RS08815 IPR004641 Ribonuclease HIII CYD28_RS08815 IPR012337 Ribonuclease H-like superfamily CYD28_RS08815 IPR024567 Ribonuclease HII/HIII domain CYD28_RS08815 IPR001352 Ribonuclease HII/HIII CYD28_RS08815 IPR036397 Ribonuclease H superfamily CYD28_RS08815 IPR024568 Ribonuclease HIII, N-terminal CYD28_RS08815 IPR012295 TBP domain superfamily CYD28_RS08820 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS08820 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CYD28_RS08820 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily CYD28_RS08820 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CYD28_RS08820 IPR005147 tRNA synthetase, B5-domain CYD28_RS08820 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain CYD28_RS08820 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain CYD28_RS08820 IPR009061 Putative DNA-binding domain superfamily CYD28_RS08820 IPR005146 B3/B4 tRNA-binding domain CYD28_RS08820 IPR002547 tRNA-binding domain CYD28_RS08820 IPR005121 Ferrodoxin-fold anticodon-binding domain CYD28_RS08825 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm CYD28_RS08825 IPR002319 Phenylalanyl-tRNA synthetase CYD28_RS08825 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CYD28_RS08825 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CYD28_RS08825 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CYD28_RS08825 IPR006195 Aminoacyl-tRNA synthetase, class II CYD28_RS08830 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYD28_RS08830 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CYD28_RS08830 IPR001537 tRNA/rRNA methyltransferase, SpoU type CYD28_RS08830 IPR029064 50S ribosomal protein L30e-like CYD28_RS08830 IPR029028 Alpha/beta knot methyltransferases CYD28_RS08835 IPR011332 Zinc-binding ribosomal protein CYD28_RS08835 IPR002677 Ribosomal protein L32p CYD28_RS08850 IPR008513 tRNA(Met) cytidine acetate ligase CYD28_RS08850 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS08855 IPR004821 Cytidyltransferase-like domain CYD28_RS08855 IPR001980 Phosphopantetheine adenylyltransferase CYD28_RS08855 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS08860 IPR004398 RNA methyltransferase, RsmD CYD28_RS08860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS08870 IPR016979 Protein of unknown function DUF2129 CYD28_RS08875 IPR030395 Glycerophosphodiester phosphodiesterase domain CYD28_RS08875 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CYD28_RS08880 IPR023378 YheA/YmcA-like domain superfamily CYD28_RS08880 IPR010368 Control of competence regulator ComK, YlbF/YmcA CYD28_RS08885 IPR029410 CAP-associated domain CYD28_RS08885 IPR035940 CAP superfamily CYD28_RS08885 IPR014044 CAP domain CYD28_RS08895 IPR006369 Protohaem IX farnesyltransferase CYD28_RS08895 IPR000537 UbiA prenyltransferase family CYD28_RS08900 IPR003780 COX15/CtaA family CYD28_RS08900 IPR023755 Heme A synthase, type 1 CYD28_RS08905 IPR005482 Biotin carboxylase, C-terminal CYD28_RS08905 IPR011054 Rudiment single hybrid motif CYD28_RS08905 IPR005930 Pyruvate carboxylase CYD28_RS08905 IPR011761 ATP-grasp fold CYD28_RS08905 IPR013785 Aldolase-type TIM barrel CYD28_RS08905 IPR005481 Biotin carboxylase-like, N-terminal domain CYD28_RS08905 IPR011764 Biotin carboxylation domain CYD28_RS08905 IPR011053 Single hybrid motif CYD28_RS08905 IPR000089 Biotin/lipoyl attachment CYD28_RS08905 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CYD28_RS08905 IPR003379 Carboxylase, conserved domain CYD28_RS08905 IPR000891 Pyruvate carboxyltransferase CYD28_RS08905 IPR016185 Pre-ATP-grasp domain superfamily CYD28_RS08910 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA CYD28_RS08910 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CYD28_RS08915 IPR036270 UPF0358 superfamily CYD28_RS08915 IPR009983 Uncharacterised protein family UPF0358 CYD28_RS08925 IPR019241 Protein of unknown function DUF2197 CYD28_RS08940 IPR020583 Inositol monophosphatase, metal-binding site CYD28_RS08940 IPR000760 Inositol monophosphatase-like CYD28_RS08940 IPR020550 Inositol monophosphatase, conserved site CYD28_RS08945 IPR009403 Protein of unknown function UPF0637 CYD28_RS08950 IPR001046 NRAMP family CYD28_RS08965 IPR006059 Bacterial extracellular solute-binding protein CYD28_RS08965 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CYD28_RS08970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS08970 IPR035906 MetI-like superfamily CYD28_RS08975 IPR035906 MetI-like superfamily CYD28_RS08975 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS08980 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS08980 IPR008995 Molybdate/tungstate binding, C-terminal CYD28_RS08980 IPR017871 ABC transporter, conserved site CYD28_RS08980 IPR003439 ABC transporter-like CYD28_RS08980 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA CYD28_RS08980 IPR003593 AAA+ ATPase domain CYD28_RS08980 IPR013611 Transport-associated OB, type 2 CYD28_RS08985 IPR001387 Cro/C1-type helix-turn-helix domain CYD28_RS08985 IPR018653 Domain of unknown function DUF2083,transcriptional regulator CYD28_RS08985 IPR026281 HTH-type transcriptional regulator RamB CYD28_RS08985 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CYD28_RS08985 IPR010359 IrrE N-terminal-like domain CYD28_RS08990 IPR007920 Protein of unknown function UPF0223 CYD28_RS08990 IPR023324 BH2638-like superfamily CYD28_RS08995 IPR006258 Dihydrolipoamide dehydrogenase CYD28_RS08995 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD28_RS08995 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS08995 IPR023753 FAD/NAD(P)-binding domain CYD28_RS08995 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CYD28_RS08995 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CYD28_RS08995 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CYD28_RS09000 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CYD28_RS09000 IPR004167 Peripheral subunit-binding domain CYD28_RS09000 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily CYD28_RS09000 IPR000089 Biotin/lipoyl attachment CYD28_RS09000 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CYD28_RS09000 IPR011053 Single hybrid motif CYD28_RS09000 IPR036625 E3-binding domain superfamily CYD28_RS09005 IPR029061 Thiamin diphosphate-binding fold CYD28_RS09005 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II CYD28_RS09005 IPR005475 Transketolase-like, pyrimidine-binding domain CYD28_RS09005 IPR033248 Transketolase, C-terminal domain CYD28_RS09010 IPR001017 Dehydrogenase, E1 component CYD28_RS09010 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha CYD28_RS09010 IPR029061 Thiamin diphosphate-binding fold CYD28_RS09020 IPR023635 Peptide deformylase CYD28_RS09020 IPR036821 Peptide deformylase superfamily CYD28_RS09030 IPR004613 Ribonuclease J CYD28_RS09030 IPR042173 Ribonuclease J, domain 2 CYD28_RS09030 IPR001587 Ribonuclease J, conserved site CYD28_RS09030 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like CYD28_RS09030 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain CYD28_RS09030 IPR001279 Metallo-beta-lactamase CYD28_RS09030 IPR041636 Ribonuclease J, C-terminal CYD28_RS09030 IPR030854 Ribonuclease J, bacteria CYD28_RS09040 IPR007401 Protein of unknown function DUF454 CYD28_RS09045 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CYD28_RS09045 IPR003148 Regulator of K+ conductance, N-terminal CYD28_RS09045 IPR036291 NAD(P)-binding domain superfamily CYD28_RS09045 IPR006037 Regulator of K+ conductance, C-terminal CYD28_RS09050 IPR003317 Cytochrome ubiquinol oxidase subunit 2 CYD28_RS09055 IPR002585 Cytochrome ubiquinol oxidase subunit 1 CYD28_RS09075 IPR018274 PEP-utilising enzyme, active site CYD28_RS09075 IPR000121 PEP-utilising enzyme, C-terminal CYD28_RS09075 IPR023151 PEP-utilising enzyme, conserved site CYD28_RS09075 IPR036637 Phosphohistidine domain superfamily CYD28_RS09075 IPR008731 Phosphotransferase system, enzyme I N-terminal CYD28_RS09075 IPR006318 Phosphotransferase system, enzyme I-like CYD28_RS09075 IPR036618 PtsI, HPr-binding domain superfamily CYD28_RS09075 IPR040442 Pyruvate kinase-like domain superfamily CYD28_RS09075 IPR008279 PEP-utilising enzyme, mobile domain CYD28_RS09075 IPR024692 Phosphotransferase system, enzyme I CYD28_RS09075 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily CYD28_RS09080 IPR035895 HPr-like superfamily CYD28_RS09080 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CYD28_RS09080 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CYD28_RS09080 IPR000032 Phosphocarrier protein HPr-like CYD28_RS09090 IPR036974 PUA domain superfamily CYD28_RS09090 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS09090 IPR019614 S-adenosylmethionine-dependent methyltransferase CYD28_RS09090 IPR041532 RlmI, PUA-like domain CYD28_RS09090 IPR015947 PUA-like superfamily CYD28_RS09090 IPR002478 PUA domain CYD28_RS09110 IPR017871 ABC transporter, conserved site CYD28_RS09110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS09110 IPR003593 AAA+ ATPase domain CYD28_RS09110 IPR003439 ABC transporter-like CYD28_RS09115 IPR024919 ECF transporter transmembrane protein EcfT CYD28_RS09115 IPR003339 ABC/ECF transporter, transmembrane component CYD28_RS09120 IPR013815 ATP-grasp fold, subdomain 1 CYD28_RS09120 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CYD28_RS09120 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CYD28_RS09120 IPR011054 Rudiment single hybrid motif CYD28_RS09120 IPR000115 Phosphoribosylglycinamide synthetase CYD28_RS09120 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CYD28_RS09120 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily CYD28_RS09120 IPR011761 ATP-grasp fold CYD28_RS09120 IPR020559 Phosphoribosylglycinamide synthetase, conserved site CYD28_RS09120 IPR016185 Pre-ATP-grasp domain superfamily CYD28_RS09125 IPR024051 AICAR transformylase, duplicated domain superfamily CYD28_RS09125 IPR011607 Methylglyoxal synthase-like domain CYD28_RS09125 IPR016193 Cytidine deaminase-like CYD28_RS09125 IPR036914 Methylglyoxal synthase-like domain superfamily CYD28_RS09125 IPR002695 Bifunctional purine biosynthesis protein PurH-like CYD28_RS09130 IPR036477 Formyl transferase, N-terminal domain superfamily CYD28_RS09130 IPR004607 Phosphoribosylglycinamide formyltransferase CYD28_RS09130 IPR002376 Formyl transferase, N-terminal CYD28_RS09135 IPR036676 PurM-like, C-terminal domain superfamily CYD28_RS09135 IPR036921 PurM-like, N-terminal domain superfamily CYD28_RS09135 IPR016188 PurM-like, N-terminal domain CYD28_RS09135 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CYD28_RS09135 IPR010918 PurM-like, C-terminal domain CYD28_RS09140 IPR035584 Amidophosphoribosyltransferase, N-terminal CYD28_RS09140 IPR005854 Amidophosphoribosyltransferase CYD28_RS09140 IPR029057 Phosphoribosyltransferase-like CYD28_RS09140 IPR000836 Phosphoribosyltransferase domain CYD28_RS09140 IPR017932 Glutamine amidotransferase type 2 domain CYD28_RS09140 IPR029055 Nucleophile aminohydrolases, N-terminal CYD28_RS09145 IPR036921 PurM-like, N-terminal domain superfamily CYD28_RS09145 IPR036676 PurM-like, C-terminal domain superfamily CYD28_RS09145 IPR010918 PurM-like, C-terminal domain CYD28_RS09145 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain CYD28_RS09145 IPR010074 Phosphoribosylformylglycinamidine subunit PurL CYD28_RS09145 IPR016188 PurM-like, N-terminal domain CYD28_RS09150 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ CYD28_RS09150 IPR017926 Glutamine amidotransferase CYD28_RS09150 IPR029062 Class I glutamine amidotransferase-like CYD28_RS09155 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily CYD28_RS09155 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS CYD28_RS09160 IPR018236 SAICAR synthetase, conserved site CYD28_RS09160 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CYD28_RS09160 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase CYD28_RS09160 IPR028923 SAICAR synthetase/ADE2, N-terminal CYD28_RS09165 IPR011054 Rudiment single hybrid motif CYD28_RS09165 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain CYD28_RS09165 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit CYD28_RS09165 IPR016185 Pre-ATP-grasp domain superfamily CYD28_RS09165 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CYD28_RS09165 IPR013815 ATP-grasp fold, subdomain 1 CYD28_RS09165 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CYD28_RS09165 IPR011761 ATP-grasp fold CYD28_RS09170 IPR033747 Class I PurE CYD28_RS09170 IPR035893 PurE domain superfamily CYD28_RS09170 IPR000031 PurE domain CYD28_RS09170 IPR024694 PurE, prokaryotic type CYD28_RS09175 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CYD28_RS09175 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CYD28_RS09175 IPR036291 NAD(P)-binding domain superfamily CYD28_RS09175 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CYD28_RS09190 IPR009050 Globin-like superfamily CYD28_RS09190 IPR000971 Globin CYD28_RS09190 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain CYD28_RS09190 IPR012292 Globin/Protoglobin CYD28_RS09190 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase CYD28_RS09190 IPR017927 FAD-binding domain, ferredoxin reductase-type CYD28_RS09190 IPR023950 Flavohemoprotein CYD28_RS09190 IPR017938 Riboflavin synthase-like beta-barrel CYD28_RS09190 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain CYD28_RS09190 IPR001433 Oxidoreductase FAD/NAD(P)-binding CYD28_RS09200 IPR002429 Cytochrome c oxidase subunit II-like C-terminal CYD28_RS09200 IPR008972 Cupredoxin CYD28_RS09200 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain CYD28_RS09200 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily CYD28_RS09200 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain CYD28_RS09200 IPR006332 Quinol oxidase subunit II CYD28_RS09205 IPR014233 Quinol oxidase subunit I CYD28_RS09205 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site CYD28_RS09205 IPR000883 Cytochrome c oxidase subunit I CYD28_RS09205 IPR036927 Cytochrome c oxidase-like, subunit I superfamily CYD28_RS09205 IPR023616 Cytochrome c oxidase-like, subunit I domain CYD28_RS09210 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle CYD28_RS09210 IPR024791 Cytochrome c oxidase subunit III CYD28_RS09210 IPR000298 Cytochrome c oxidase subunit III-like CYD28_RS09210 IPR033946 Ubiquinol oxidase subunit III domain CYD28_RS09210 IPR014246 Quinol oxidase subunit III CYD28_RS09210 IPR035973 Cytochrome c oxidase subunit III-like superfamily CYD28_RS09215 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes CYD28_RS09215 IPR014250 Quinol oxidase subunit IV CYD28_RS09220 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CYD28_RS09220 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CYD28_RS09220 IPR022976 Non-specific ribonucleoside hydrolase RihC CYD28_RS09220 IPR036452 Ribonucleoside hydrolase-like CYD28_RS09220 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site CYD28_RS09225 IPR012338 Beta-lactamase/transpeptidase-like CYD28_RS09225 IPR001466 Beta-lactamase-related CYD28_RS09230 IPR004474 Cell envelope-related transcriptional attenuator domain CYD28_RS09235 IPR024469 Protein of unknown function DUF2538 CYD28_RS09240 IPR000182 GNAT domain CYD28_RS09240 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS09240 IPR039143 Glucosamine 6-phosphate N-acetyltransferase CYD28_RS09245 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CYD28_RS09245 IPR025987 GW domain CYD28_RS09245 IPR038200 GW domain superfamily CYD28_RS09245 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CYD28_RS09245 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily CYD28_RS09260 IPR002656 Acyltransferase 3 CYD28_RS09265 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS09265 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS09265 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS09265 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CYD28_RS09265 IPR004839 Aminotransferase, class I/classII CYD28_RS09270 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CYD28_RS09270 IPR001753 Enoyl-CoA hydratase/isomerase CYD28_RS09270 IPR014748 Enoyl-CoA hydratase, C-terminal CYD28_RS09270 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB CYD28_RS09270 IPR029045 ClpP/crotonase-like domain superfamily CYD28_RS09275 IPR029058 Alpha/Beta hydrolase fold CYD28_RS09275 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase CYD28_RS09275 IPR000073 Alpha/beta hydrolase fold-1 CYD28_RS09280 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase CYD28_RS09280 IPR032264 Menaquinone biosynthesis protein MenD, middle domain CYD28_RS09280 IPR029061 Thiamin diphosphate-binding fold CYD28_RS09280 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain CYD28_RS09280 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CYD28_RS09280 IPR029035 DHS-like NAD/FAD-binding domain superfamily CYD28_RS09285 IPR015890 Chorismate-utilising enzyme, C-terminal CYD28_RS09285 IPR004561 Isochorismate synthase CYD28_RS09285 IPR034681 Isochorismate synthase MenF CYD28_RS09285 IPR005801 ADC synthase CYD28_RS09290 IPR026046 UbiA prenyltransferase domain containing protein 1 CYD28_RS09290 IPR000537 UbiA prenyltransferase family CYD28_RS09290 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase CYD28_RS09340 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CYD28_RS09340 IPR019491 Lipoate protein ligase, C-terminal CYD28_RS09340 IPR004562 Lipoyltransferase/lipoate-protein ligase CYD28_RS09345 IPR018690 Protein of unknown function DUF2187 CYD28_RS09365 IPR003445 Cation transporter CYD28_RS09370 IPR036034 PDZ superfamily CYD28_RS09370 IPR001478 PDZ domain CYD28_RS09370 IPR009003 Peptidase S1, PA clan CYD28_RS09370 IPR001940 Peptidase S1C CYD28_RS09375 IPR022493 Integral membrane YkoY CYD28_RS09375 IPR036259 MFS transporter superfamily CYD28_RS09375 IPR005496 Integral membrane protein TerC CYD28_RS09380 IPR035647 EF-G domain III/V-like CYD28_RS09380 IPR004161 Translation elongation factor EFTu-like, domain 2 CYD28_RS09380 IPR031157 Tr-type G domain, conserved site CYD28_RS09380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS09380 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily CYD28_RS09380 IPR032090 Peptide chain release factor 3, C-terminal CYD28_RS09380 IPR041732 Peptide chain release factor 3, GTP-binding domain CYD28_RS09380 IPR005225 Small GTP-binding protein domain CYD28_RS09380 IPR000795 Transcription factor, GTP-binding domain CYD28_RS09380 IPR009000 Translation protein, beta-barrel domain superfamily CYD28_RS09380 IPR004548 Peptide chain release factor 3 CYD28_RS09390 IPR036565 Mur-like, catalytic domain superfamily CYD28_RS09390 IPR036615 Mur ligase, C-terminal domain superfamily CYD28_RS09390 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CYD28_RS09390 IPR013221 Mur ligase, central CYD28_RS09390 IPR000713 Mur ligase, N-terminal catalytic domain CYD28_RS09390 IPR035911 MurE/MurF, N-terminal CYD28_RS09390 IPR004101 Mur ligase, C-terminal CYD28_RS09395 IPR007235 Glycosyl transferase, family 28, C-terminal CYD28_RS09395 IPR009695 Diacylglycerol glucosyltransferase, N-terminal CYD28_RS09395 IPR023589 Processive diacylglycerol beta-glucosyltransferase CYD28_RS09400 IPR011701 Major facilitator superfamily CYD28_RS09400 IPR036259 MFS transporter superfamily CYD28_RS09400 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CYD28_RS09400 IPR020846 Major facilitator superfamily domain CYD28_RS09405 IPR001584 Integrase, catalytic core CYD28_RS09405 IPR012337 Ribonuclease H-like superfamily CYD28_RS09405 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS09410 IPR022932 Putative phosphoesterase YjcG CYD28_RS09410 IPR009097 Cyclic phosphodiesterase CYD28_RS09415 IPR029058 Alpha/Beta hydrolase fold CYD28_RS09415 IPR000801 Putative esterase CYD28_RS09420 IPR002549 Transmembrane protein TqsA-like CYD28_RS09425 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS09425 IPR036291 NAD(P)-binding domain superfamily CYD28_RS09425 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) CYD28_RS09430 IPR003148 Regulator of K+ conductance, N-terminal CYD28_RS09430 IPR006037 Regulator of K+ conductance, C-terminal CYD28_RS09430 IPR036291 NAD(P)-binding domain superfamily CYD28_RS09430 IPR038770 Sodium/solute symporter superfamily CYD28_RS09430 IPR006153 Cation/H+ exchanger CYD28_RS09430 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily CYD28_RS09435 IPR000644 CBS domain CYD28_RS09435 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily CYD28_RS09435 IPR038048 Magnesium transporter MgtE, transmembrane domain CYD28_RS09435 IPR038076 MgtE, N-terminal domain superfamily CYD28_RS09435 IPR006669 Magnesium transporter MgtE CYD28_RS09435 IPR006667 SLC41 divalent cation transporters, integral membrane domain CYD28_RS09435 IPR006668 Magnesium transporter, MgtE intracellular domain CYD28_RS09440 IPR020103 Pseudouridine synthase, catalytic domain superfamily CYD28_RS09440 IPR006145 Pseudouridine synthase, RsuA/RluA CYD28_RS09440 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CYD28_RS09440 IPR006225 Pseudouridine synthase, RluC/RluD CYD28_RS09440 IPR002942 RNA-binding S4 domain CYD28_RS09445 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CYD28_RS09445 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CYD28_RS09445 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal CYD28_RS09445 IPR002504 NAD kinase CYD28_RS09450 IPR007685 RelA/SpoT CYD28_RS09455 IPR020908 Uncharacterised protein family UPF0738 CYD28_RS09460 IPR023577 CYTH domain CYD28_RS09460 IPR009195 Uncharacterised protein family YjbK CYD28_RS09460 IPR033469 CYTH-like domain superfamily CYD28_RS09465 IPR012292 Globin/Protoglobin CYD28_RS09465 IPR009050 Globin-like superfamily CYD28_RS09465 IPR001486 Truncated hemoglobin CYD28_RS09465 IPR019795 Globin, bacterial-like, conserved site CYD28_RS09475 IPR001567 Peptidase M3A/M3B catalytic domain CYD28_RS09475 IPR013647 Oligopeptidase F, N-terminal domain CYD28_RS09475 IPR004438 Peptidase M3B, oligoendopeptidase F CYD28_RS09475 IPR042088 Oligoendopeptidase F, C-terminal domain CYD28_RS09485 IPR038471 MecA, C-terminal domain superfamily CYD28_RS09485 IPR008681 Negative regulator of genetic competence, MecA CYD28_RS09490 IPR023731 Regulatory protein Spx CYD28_RS09490 IPR006660 Arsenate reductase-like CYD28_RS09490 IPR006504 Transcriptional regulator Spx/MgsR CYD28_RS09490 IPR036249 Thioredoxin-like superfamily CYD28_RS09495 IPR002306 Tryptophan-tRNA ligase CYD28_RS09495 IPR024109 Tryptophan-tRNA ligase, bacterial-type CYD28_RS09495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS09495 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CYD28_RS09495 IPR002305 Aminoacyl-tRNA synthetase, class Ic CYD28_RS09505 IPR039424 Solute-binding protein family 5 CYD28_RS09505 IPR023765 Solute-binding protein family 5, conserved site CYD28_RS09505 IPR000914 Solute-binding protein family 5 domain CYD28_RS09505 IPR030678 Peptide/nickel binding protein, MppA-type CYD28_RS09510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS09510 IPR017871 ABC transporter, conserved site CYD28_RS09510 IPR003439 ABC transporter-like CYD28_RS09510 IPR003593 AAA+ ATPase domain CYD28_RS09510 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CYD28_RS09515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS09515 IPR003439 ABC transporter-like CYD28_RS09515 IPR003593 AAA+ ATPase domain CYD28_RS09515 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CYD28_RS09515 IPR017871 ABC transporter, conserved site CYD28_RS09520 IPR035906 MetI-like superfamily CYD28_RS09520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS09520 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CYD28_RS09525 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS09525 IPR035906 MetI-like superfamily CYD28_RS09535 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CYD28_RS09535 IPR014030 Beta-ketoacyl synthase, N-terminal CYD28_RS09535 IPR000794 Beta-ketoacyl synthase CYD28_RS09535 IPR018201 Beta-ketoacyl synthase, active site CYD28_RS09535 IPR014031 Beta-ketoacyl synthase, C-terminal CYD28_RS09535 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CYD28_RS09535 IPR016039 Thiolase-like CYD28_RS09540 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal CYD28_RS09540 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CYD28_RS09540 IPR016039 Thiolase-like CYD28_RS09540 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CYD28_RS09550 IPR028299 ClpA/B, conserved site 2 CYD28_RS09550 IPR001270 ClpA/B family CYD28_RS09550 IPR041546 ClpA/ClpB, AAA lid domain CYD28_RS09550 IPR004176 Clp, N-terminal CYD28_RS09550 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS09550 IPR017730 Chaperonin ClpB CYD28_RS09550 IPR003593 AAA+ ATPase domain CYD28_RS09550 IPR003959 ATPase, AAA-type, core CYD28_RS09550 IPR018368 ClpA/B, conserved site 1 CYD28_RS09550 IPR019489 Clp ATPase, C-terminal CYD28_RS09550 IPR036628 Clp, N-terminal domain superfamily CYD28_RS09555 IPR002656 Acyltransferase 3 CYD28_RS09555 IPR036514 SGNH hydrolase superfamily CYD28_RS09560 IPR002744 MIP18 family-like CYD28_RS09560 IPR034904 Fe-S cluster assembly domain superfamily CYD28_RS09565 IPR036412 HAD-like superfamily CYD28_RS09565 IPR000150 Cof family CYD28_RS09565 IPR006379 HAD-superfamily hydrolase, subfamily IIB CYD28_RS09565 IPR023214 HAD superfamily CYD28_RS09570 IPR017758 Coenzyme A disulphide reductase CYD28_RS09570 IPR023753 FAD/NAD(P)-binding domain CYD28_RS09570 IPR023536 Coenzyme A disulphide reductase, staphyolococci CYD28_RS09570 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CYD28_RS09570 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS09570 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD28_RS09575 IPR010899 Protein of unknown function UPF0344 CYD28_RS09585 IPR011234 Fumarylacetoacetase-like, C-terminal CYD28_RS09585 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily CYD28_RS09585 IPR000403 Phosphatidylinositol 3-/4-kinase, catalytic domain CYD28_RS09590 IPR000212 DNA helicase, UvrD/REP type CYD28_RS09590 IPR014017 UvrD-like DNA helicase, C-terminal CYD28_RS09590 IPR011604 Exonuclease, phage-type/RecB, C-terminal CYD28_RS09590 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CYD28_RS09590 IPR011335 Restriction endonuclease type II-like CYD28_RS09590 IPR014016 UvrD-like helicase, ATP-binding domain CYD28_RS09590 IPR014152 DNA helicase subunit AddA CYD28_RS09590 IPR034739 UvrD/AddA helicase, N-terminal CYD28_RS09590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS09595 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS09595 IPR000212 DNA helicase, UvrD/REP type CYD28_RS09595 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type CYD28_RS09595 IPR014017 UvrD-like DNA helicase, C-terminal CYD28_RS09595 IPR014140 DNA helicase subunit AddB CYD28_RS09595 IPR014016 UvrD-like helicase, ATP-binding domain CYD28_RS09600 IPR019756 Peptidase S26A, signal peptidase I, serine active site CYD28_RS09600 IPR019533 Peptidase S26 CYD28_RS09600 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CYD28_RS09600 IPR019758 Peptidase S26A, signal peptidase I, conserved site CYD28_RS09600 IPR000223 Peptidase S26A, signal peptidase I CYD28_RS09600 IPR036286 LexA/Signal peptidase-like superfamily CYD28_RS09605 IPR036286 LexA/Signal peptidase-like superfamily CYD28_RS09605 IPR000223 Peptidase S26A, signal peptidase I CYD28_RS09605 IPR019533 Peptidase S26 CYD28_RS09610 IPR015414 Transmembrane protein TMEM64 CYD28_RS09610 IPR032816 SNARE associated Golgi protein CYD28_RS09615 IPR001672 Phosphoglucose isomerase (PGI) CYD28_RS09615 IPR035482 Phosphoglucose isomerase, SIS domain 2 CYD28_RS09615 IPR035476 Phosphoglucose isomerase, SIS domain 1 CYD28_RS09615 IPR018189 Phosphoglucose isomerase, conserved site CYD28_RS09620 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CYD28_RS09620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS09620 IPR023434 Argininosuccinate synthase, type 1 subfamily CYD28_RS09620 IPR018223 Argininosuccinate synthase, conserved site CYD28_RS09620 IPR001518 Argininosuccinate synthase CYD28_RS09625 IPR000362 Fumarate lyase family CYD28_RS09625 IPR029419 Argininosuccinate lyase, C-terminal CYD28_RS09625 IPR009049 Argininosuccinate lyase CYD28_RS09625 IPR024083 Fumarase/histidase, N-terminal CYD28_RS09625 IPR022761 Fumarate lyase, N-terminal CYD28_RS09625 IPR020557 Fumarate lyase, conserved site CYD28_RS09625 IPR008948 L-Aspartase-like CYD28_RS09630 IPR030395 Glycerophosphodiester phosphodiesterase domain CYD28_RS09630 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily CYD28_RS09635 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CYD28_RS09635 IPR014362 Glutamate dehydrogenase CYD28_RS09635 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CYD28_RS09635 IPR036291 NAD(P)-binding domain superfamily CYD28_RS09635 IPR033922 NAD(P) binding domain of glutamate dehydrogenase CYD28_RS09635 IPR033524 Leu/Phe/Val dehydrogenases active site CYD28_RS09635 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CYD28_RS09640 IPR010164 Ornithine aminotransferase CYD28_RS09640 IPR005814 Aminotransferase class-III CYD28_RS09640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS09640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS09640 IPR034757 Ornithine aminotransferase, bacterial type CYD28_RS09640 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS09645 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CYD28_RS09645 IPR013785 Aldolase-type TIM barrel CYD28_RS09650 IPR022967 RNA-binding domain, S1 CYD28_RS09650 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS09650 IPR003029 S1 domain CYD28_RS09655 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CYD28_RS09655 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CYD28_RS09655 IPR029000 Cyclophilin-like domain superfamily CYD28_RS09665 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup CYD28_RS09665 IPR005663 Monovalent cation proton antiporter subunit A CYD28_RS09665 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CYD28_RS09665 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CYD28_RS09665 IPR025383 Domain of unknown function DUF4040 CYD28_RS09670 IPR005281 Monovalent cation:proton antiporter, subunit B CYD28_RS09670 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CYD28_RS09675 IPR006673 Mnh complex subunit C1 CYD28_RS09675 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CYD28_RS09680 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CYD28_RS09680 IPR003918 NADH:ubiquinone oxidoreductase CYD28_RS09685 IPR002758 Na+/H+ antiporter subunit E CYD28_RS09690 IPR007208 Na(+)/H(+) antiporter subunit F-like CYD28_RS09695 IPR005133 Na+/H+ antiporter subunit G CYD28_RS09705 IPR006683 Thioesterase domain CYD28_RS09705 IPR003736 Phenylacetic acid degradation-related domain CYD28_RS09705 IPR029069 HotDog domain superfamily CYD28_RS09710 IPR032813 Putative Na+/H+ antiporter, N-terminal CYD28_RS09710 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal CYD28_RS09715 IPR023042 Peptidase M17, leucine aminopeptidase CYD28_RS09715 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal CYD28_RS09715 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B CYD28_RS09715 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal CYD28_RS09720 IPR023753 FAD/NAD(P)-binding domain CYD28_RS09720 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS09725 IPR000361 FeS cluster biogenesis CYD28_RS09725 IPR035903 HesB-like domain superfamily CYD28_RS09725 IPR016092 FeS cluster insertion protein CYD28_RS09725 IPR017870 FeS cluster insertion, C-terminal, conserved site CYD28_RS09730 IPR009910 Protein of unknown function DUF1450 CYD28_RS09730 IPR022916 Protein of unknown function UPF0349 CYD28_RS09735 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS09735 IPR023753 FAD/NAD(P)-binding domain CYD28_RS09740 IPR038218 YuzD-like superfamily CYD28_RS09740 IPR009190 Protein of unknown function DUF1462 CYD28_RS09740 IPR036249 Thioredoxin-like superfamily CYD28_RS09745 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal CYD28_RS09745 IPR034904 Fe-S cluster assembly domain superfamily CYD28_RS09755 IPR006998 DltD CYD28_RS09755 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes CYD28_RS09760 IPR036736 ACP-like superfamily CYD28_RS09760 IPR003230 D-alanyl carrier protein CYD28_RS09760 IPR009081 Phosphopantetheine binding ACP domain CYD28_RS09765 IPR004299 Membrane bound O-acyl transferase, MBOAT CYD28_RS09765 IPR024024 D-alanyl transfer protein DltB CYD28_RS09765 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CYD28_RS09770 IPR000873 AMP-dependent synthetase/ligase CYD28_RS09770 IPR042099 AMP-dependent synthetase-like superfamily CYD28_RS09770 IPR025110 AMP-binding enzyme, C-terminal domain CYD28_RS09770 IPR010072 D-alanine--D-alanyl carrier protein ligase CYD28_RS09770 IPR010071 Amino acid adenylation domain CYD28_RS09780 IPR036291 NAD(P)-binding domain superfamily CYD28_RS09780 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CYD28_RS09780 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CYD28_RS09780 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CYD28_RS09780 IPR023756 Glyoxylate/hydroxypyruvate reductase B CYD28_RS09785 IPR036412 HAD-like superfamily CYD28_RS09785 IPR006357 HAD-superfamily hydrolase, subfamily IIA CYD28_RS09785 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 CYD28_RS09785 IPR023214 HAD superfamily CYD28_RS09790 IPR037038 Bsu32300-like superfamily CYD28_RS09790 IPR008201 Protein of unknown function DUF86 CYD28_RS09800 IPR009370 Protein of unknown function DUF1027 CYD28_RS09800 IPR038141 YutD-like superfamily CYD28_RS09805 IPR031691 Lipoyl synthase, N-terminal CYD28_RS09805 IPR013785 Aldolase-type TIM barrel CYD28_RS09805 IPR003698 Lipoyl synthase CYD28_RS09805 IPR006638 Elp3/MiaB/NifB CYD28_RS09805 IPR007197 Radical SAM CYD28_RS09810 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CYD28_RS09810 IPR011240 Phosphoesterase-related protein YunD CYD28_RS09810 IPR029052 Metallo-dependent phosphatase-like CYD28_RS09810 IPR006179 5'-Nucleotidase/apyrase CYD28_RS09810 IPR008334 5'-Nucleotidase, C-terminal CYD28_RS09815 IPR002781 Transmembrane protein TauE-like CYD28_RS09820 IPR036520 UPF0759 superfamily CYD28_RS09820 IPR002763 Protein of unknown function DUF72 CYD28_RS09825 IPR004136 Nitronate monooxygenase CYD28_RS09825 IPR013785 Aldolase-type TIM barrel CYD28_RS09835 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CYD28_RS09835 IPR010231 SUF system FeS cluster assembly, SufB CYD28_RS09835 IPR000825 SUF system FeS cluster assembly, SufBD CYD28_RS09840 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CYD28_RS09845 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS09845 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS09845 IPR000192 Aminotransferase class V domain CYD28_RS09845 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS09845 IPR016454 Cysteine desulfurase CYD28_RS09845 IPR010970 Cysteine desulfurase, SufS CYD28_RS09850 IPR011542 SUF system FeS cluster assembly, SufD CYD28_RS09850 IPR037284 SUF system FeS cluster assembly, SufBD superfamily CYD28_RS09850 IPR000825 SUF system FeS cluster assembly, SufBD CYD28_RS09855 IPR003439 ABC transporter-like CYD28_RS09855 IPR003593 AAA+ ATPase domain CYD28_RS09855 IPR017871 ABC transporter, conserved site CYD28_RS09855 IPR010230 FeS cluster assembly SUF system, ATPase SufC CYD28_RS09855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS09870 IPR008462 CsbD-like domain CYD28_RS09870 IPR036629 YjbJ superfamily CYD28_RS09875 IPR004872 Lipoprotein NlpA family CYD28_RS09880 IPR035906 MetI-like superfamily CYD28_RS09880 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS09885 IPR018449 NIL domain CYD28_RS09885 IPR003439 ABC transporter-like CYD28_RS09885 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal CYD28_RS09885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS09885 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain CYD28_RS09885 IPR017871 ABC transporter, conserved site CYD28_RS09885 IPR003593 AAA+ ATPase domain CYD28_RS09895 IPR034141 Ribonuclease M5-like, TOPRIM domain CYD28_RS09895 IPR006171 TOPRIM domain CYD28_RS09900 IPR017453 Glycine cleavage system H-protein, subgroup CYD28_RS09900 IPR002930 Glycine cleavage system H-protein CYD28_RS09900 IPR000089 Biotin/lipoyl attachment CYD28_RS09900 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CYD28_RS09900 IPR011053 Single hybrid motif CYD28_RS09900 IPR033753 Glycine cleavage system H-protein/Simiate CYD28_RS09905 IPR006504 Transcriptional regulator Spx/MgsR CYD28_RS09905 IPR036249 Thioredoxin-like superfamily CYD28_RS09905 IPR006660 Arsenate reductase-like CYD28_RS09910 IPR013766 Thioredoxin domain CYD28_RS09910 IPR036249 Thioredoxin-like superfamily CYD28_RS09910 IPR005746 Thioredoxin CYD28_RS09920 IPR013785 Aldolase-type TIM barrel CYD28_RS09920 IPR001381 3-dehydroquinate dehydratase type I CYD28_RS09925 IPR015946 K homology domain-like, alpha/beta CYD28_RS09925 IPR019953 Organic hydroperoxide resistance protein famiy CYD28_RS09925 IPR036102 OsmC/Ohr superfamily CYD28_RS09925 IPR003718 OsmC/Ohr family CYD28_RS09935 IPR001123 Amino acid exporter protein, LeuE-type CYD28_RS09940 IPR013078 Histidine phosphatase superfamily, clade-1 CYD28_RS09940 IPR029033 Histidine phosphatase superfamily CYD28_RS09940 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CYD28_RS09940 IPR023086 Phosphoglycerate mutase, GpmB, probable CYD28_RS09980 IPR017813 Mycothiol acetyltransferase CYD28_RS09980 IPR000182 GNAT domain CYD28_RS09980 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS09985 IPR038128 Poly-gamma-glutamate hydrolase superfamily CYD28_RS09985 IPR008585 Poly-gamma-glutamate hydrolase CYD28_RS10015 IPR000037 SsrA-binding protein CYD28_RS10015 IPR023620 Small protein B CYD28_RS10015 IPR020081 SsrA-binding protein, conserved site CYD28_RS10020 IPR040476 RNase II/RNase R, cold shock domain CYD28_RS10020 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS10020 IPR013223 Ribonuclease B, N-terminal OB domain CYD28_RS10020 IPR001900 Ribonuclease II/R CYD28_RS10020 IPR022966 Ribonuclease II/R, conserved site CYD28_RS10020 IPR011129 Cold shock domain CYD28_RS10020 IPR004476 Ribonuclease II/ribonuclease R CYD28_RS10020 IPR003029 S1 domain CYD28_RS10020 IPR022967 RNA-binding domain, S1 CYD28_RS10020 IPR011805 Ribonuclease R CYD28_RS10025 IPR012354 Esterase/lipase CYD28_RS10025 IPR022742 Serine aminopeptidase, S33 CYD28_RS10025 IPR029058 Alpha/Beta hydrolase fold CYD28_RS10030 IPR004692 Preprotein translocase SecG subunit CYD28_RS10040 IPR020809 Enolase, conserved site CYD28_RS10040 IPR000941 Enolase CYD28_RS10040 IPR029017 Enolase-like, N-terminal CYD28_RS10040 IPR036849 Enolase-like, C-terminal domain superfamily CYD28_RS10040 IPR020811 Enolase, N-terminal CYD28_RS10040 IPR020810 Enolase, C-terminal TIM barrel domain CYD28_RS10045 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily CYD28_RS10045 IPR017850 Alkaline-phosphatase-like, core domain superfamily CYD28_RS10045 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent CYD28_RS10045 IPR011258 BPG-independent PGAM, N-terminal CYD28_RS10045 IPR006124 Metalloenzyme CYD28_RS10050 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CYD28_RS10050 IPR000652 Triosephosphate isomerase CYD28_RS10050 IPR035990 Triosephosphate isomerase superfamily CYD28_RS10050 IPR013785 Aldolase-type TIM barrel CYD28_RS10050 IPR020861 Triosephosphate isomerase, active site CYD28_RS10055 IPR015824 Phosphoglycerate kinase, N-terminal CYD28_RS10055 IPR001576 Phosphoglycerate kinase CYD28_RS10055 IPR036043 Phosphoglycerate kinase superfamily CYD28_RS10060 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CYD28_RS10060 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CYD28_RS10060 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CYD28_RS10060 IPR036291 NAD(P)-binding domain superfamily CYD28_RS10060 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CYD28_RS10060 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CYD28_RS10065 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS10065 IPR037171 NagB/RpiA transferase-like CYD28_RS10065 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS10065 IPR007324 Sugar-binding domain, putative CYD28_RS10085 IPR013549 Domain of unknown function DUF1731 CYD28_RS10085 IPR001509 NAD-dependent epimerase/dehydratase CYD28_RS10085 IPR036291 NAD(P)-binding domain superfamily CYD28_RS10085 IPR010099 Epimerase family protein SDR39U1 CYD28_RS10095 IPR001907 ATP-dependent Clp protease proteolytic subunit CYD28_RS10095 IPR033135 ClpP, histidine active site CYD28_RS10095 IPR018215 ClpP, Ser active site CYD28_RS10095 IPR029045 ClpP/crotonase-like domain superfamily CYD28_RS10095 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CYD28_RS10105 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS10105 IPR023054 Sporulation regulator WhiA, C-terminal CYD28_RS10105 IPR027434 Homing endonuclease CYD28_RS10105 IPR003802 Sporulation regulator WhiA CYD28_RS10105 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain CYD28_RS10105 IPR039518 WhiA, LAGLIDADG-like domain CYD28_RS10110 IPR038136 Gluconeogenesis factor superfamily CYD28_RS10110 IPR010119 Gluconeogenesis factor CYD28_RS10110 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CYD28_RS10115 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10115 IPR005337 RapZ-like family CYD28_RS10120 IPR005982 Thioredoxin reductase CYD28_RS10120 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CYD28_RS10120 IPR023753 FAD/NAD(P)-binding domain CYD28_RS10120 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS10130 IPR001451 Hexapeptide repeat CYD28_RS10130 IPR018357 Hexapeptide transferase, conserved site CYD28_RS10130 IPR011004 Trimeric LpxA-like superfamily CYD28_RS10135 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt CYD28_RS10140 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal CYD28_RS10140 IPR011104 HPr kinase/phosphorylase, C-terminal CYD28_RS10140 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily CYD28_RS10140 IPR003755 HPr(Ser) kinase/phosphorylase CYD28_RS10145 IPR041552 UvrA DNA-binding domain CYD28_RS10145 IPR041102 UvrA, interaction domain CYD28_RS10145 IPR017871 ABC transporter, conserved site CYD28_RS10145 IPR003439 ABC transporter-like CYD28_RS10145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10145 IPR004602 UvrABC system subunit A CYD28_RS10150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10150 IPR024759 UvrB, YAD/RRR-motif-containing domain CYD28_RS10150 IPR004807 UvrABC system, subunit B CYD28_RS10150 IPR006935 Helicase/UvrB, N-terminal CYD28_RS10150 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYD28_RS10150 IPR001650 Helicase, C-terminal CYD28_RS10150 IPR001943 UVR domain CYD28_RS10150 IPR041471 UvrB, interaction domain CYD28_RS10150 IPR036876 UVR domain superfamily CYD28_RS10165 IPR002347 Short-chain dehydrogenase/reductase SDR CYD28_RS10165 IPR020904 Short-chain dehydrogenase/reductase, conserved site CYD28_RS10165 IPR036291 NAD(P)-binding domain superfamily CYD28_RS10170 IPR038765 Papain-like cysteine peptidase superfamily CYD28_RS10170 IPR007921 CHAP domain CYD28_RS10170 IPR018392 LysM domain CYD28_RS10170 IPR036779 LysM domain superfamily CYD28_RS10180 IPR011116 SecA Wing/Scaffold CYD28_RS10180 IPR011130 SecA, preprotein cross-linking domain CYD28_RS10180 IPR014018 SecA motor DEAD CYD28_RS10180 IPR011115 SecA DEAD-like, N-terminal CYD28_RS10180 IPR020937 SecA conserved site CYD28_RS10180 IPR000185 Protein translocase subunit SecA CYD28_RS10180 IPR004027 SEC-C motif CYD28_RS10180 IPR036670 SecA, preprotein cross-linking domain superfamily CYD28_RS10180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10180 IPR036266 SecA, Wing/Scaffold superfamily CYD28_RS10185 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily CYD28_RS10185 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal CYD28_RS10185 IPR034694 Ribosome hibernation promoting factor, long/plastid CYD28_RS10185 IPR036567 Ribosome hibernation promotion factor-like CYD28_RS10185 IPR003489 Ribosome hibernation promoting factor/RaiA CYD28_RS10190 IPR029057 Phosphoribosyltransferase-like CYD28_RS10190 IPR005222 Competence protein ComF CYD28_RS10190 IPR000836 Phosphoribosyltransferase domain CYD28_RS10195 IPR001650 Helicase, C-terminal CYD28_RS10195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10195 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYD28_RS10195 IPR006935 Helicase/UvrB, N-terminal CYD28_RS10200 IPR003797 DegV CYD28_RS10205 IPR015796 Impact family, bacterial/archaeal CYD28_RS10205 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CYD28_RS10205 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CYD28_RS10205 IPR001498 Impact, N-terminal CYD28_RS10205 IPR036956 Impact, N-terminal domain superfamily CYD28_RS10205 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS10205 IPR023582 Impact family CYD28_RS10205 IPR035647 EF-G domain III/V-like CYD28_RS10210 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CYD28_RS10210 IPR000715 Glycosyl transferase, family 4 CYD28_RS10215 IPR029787 Nucleotide cyclase CYD28_RS10215 IPR000160 GGDEF domain CYD28_RS10230 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CYD28_RS10230 IPR002933 Peptidase M20 CYD28_RS10230 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS10230 IPR011650 Peptidase M20, dimerisation domain CYD28_RS10230 IPR010161 Peptidase M20B, tripeptide aminopeptidase CYD28_RS10235 IPR036129 Glycerate kinase superfamily CYD28_RS10235 IPR018197 Glycerate kinase, restriction-enzyme-like fold CYD28_RS10235 IPR004381 Glycerate kinase CYD28_RS10235 IPR018193 Glycerate kinase, flavodoxin-like fold CYD28_RS10255 IPR006094 FAD linked oxidase, N-terminal CYD28_RS10255 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CYD28_RS10255 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CYD28_RS10255 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily CYD28_RS10255 IPR016167 FAD-binding, type PCMH, subdomain 1 CYD28_RS10255 IPR036318 FAD-binding, type PCMH-like superfamily CYD28_RS10255 IPR016169 FAD-binding, type PCMH, subdomain 2 CYD28_RS10255 IPR016166 FAD-binding domain, PCMH-type CYD28_RS10270 IPR033870 FatB domain CYD28_RS10270 IPR002491 ABC transporter periplasmic binding domain CYD28_RS10275 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10275 IPR003439 ABC transporter-like CYD28_RS10275 IPR017871 ABC transporter, conserved site CYD28_RS10275 IPR003593 AAA+ ATPase domain CYD28_RS10280 IPR000522 ABC transporter, permease protein, BtuC-like CYD28_RS10280 IPR037294 ABC transporter, BtuC-like CYD28_RS10285 IPR000522 ABC transporter, permease protein, BtuC-like CYD28_RS10285 IPR037294 ABC transporter, BtuC-like CYD28_RS10290 IPR033909 Ribonucleotide reductase small subunit CYD28_RS10290 IPR009078 Ferritin-like superfamily CYD28_RS10290 IPR000358 Ribonucleotide reductase small subunit family CYD28_RS10290 IPR012348 Ribonucleotide reductase-like CYD28_RS10290 IPR030475 Ribonucleotide reductase small subunit, acitve site CYD28_RS10290 IPR026494 Ribonucleoside reductase subunit beta, NrdF CYD28_RS10295 IPR000788 Ribonucleotide reductase large subunit, C-terminal CYD28_RS10295 IPR013346 Ribonucleotide reductase, class I , alpha subunit CYD28_RS10295 IPR013509 Ribonucleotide reductase large subunit, N-terminal CYD28_RS10295 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE CYD28_RS10295 IPR013554 Ribonucleotide reductase N-terminal CYD28_RS10295 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CYD28_RS10295 IPR039718 Ribonucleoside-diphosphate reductase large subunit CYD28_RS10300 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CYD28_RS10300 IPR004465 Ribonucleotide reductase Class Ib, NrdI CYD28_RS10300 IPR029039 Flavoprotein-like superfamily CYD28_RS10310 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 CYD28_RS10310 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF CYD28_RS10315 IPR020846 Major facilitator superfamily domain CYD28_RS10315 IPR005279 Dipeptide/tripeptide permease CYD28_RS10315 IPR000109 Proton-dependent oligopeptide transporter family CYD28_RS10315 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CYD28_RS10315 IPR036259 MFS transporter superfamily CYD28_RS10320 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily CYD28_RS10320 IPR001206 Diacylglycerol kinase, catalytic domain CYD28_RS10320 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal CYD28_RS10320 IPR005218 Diacylglycerol/lipid kinase CYD28_RS10325 IPR023214 HAD superfamily CYD28_RS10325 IPR010708 5'(3')-deoxyribonucleotidase CYD28_RS10325 IPR036412 HAD-like superfamily CYD28_RS10330 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS10330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS10330 IPR005861 Histidinol-phosphate aminotransferase family CYD28_RS10330 IPR004839 Aminotransferase, class I/classII CYD28_RS10330 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CYD28_RS10330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS10335 IPR036259 MFS transporter superfamily CYD28_RS10335 IPR020846 Major facilitator superfamily domain CYD28_RS10335 IPR005279 Dipeptide/tripeptide permease CYD28_RS10335 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CYD28_RS10335 IPR000109 Proton-dependent oligopeptide transporter family CYD28_RS10340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like CYD28_RS10340 IPR035906 MetI-like superfamily CYD28_RS10345 IPR000644 CBS domain CYD28_RS10345 IPR005892 Glycine betaine transport ATP-binding subunit CYD28_RS10345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10345 IPR003593 AAA+ ATPase domain CYD28_RS10345 IPR003439 ABC transporter-like CYD28_RS10345 IPR017871 ABC transporter, conserved site CYD28_RS10350 IPR011545 DEAD/DEAH box helicase domain CYD28_RS10350 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS10350 IPR004589 DNA helicase, ATP-dependent, RecQ type CYD28_RS10350 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CYD28_RS10350 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYD28_RS10350 IPR001650 Helicase, C-terminal CYD28_RS10350 IPR010997 HRDC-like superfamily CYD28_RS10350 IPR018982 RQC domain CYD28_RS10350 IPR002121 HRDC domain CYD28_RS10350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10350 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS10350 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CYD28_RS10355 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CYD28_RS10355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10355 IPR017871 ABC transporter, conserved site CYD28_RS10355 IPR003593 AAA+ ATPase domain CYD28_RS10355 IPR032781 ABC-transporter extension domain CYD28_RS10355 IPR032524 ABC transporter Uup, C-terminal CYD28_RS10355 IPR003439 ABC transporter-like CYD28_RS10360 IPR003689 Zinc/iron permease CYD28_RS10365 IPR000917 Sulfatase, N-terminal CYD28_RS10365 IPR017850 Alkaline-phosphatase-like, core domain superfamily CYD28_RS10365 IPR012160 Lipoteichoic acid synthase-like CYD28_RS10370 IPR003778 Carboxyltransferase domain, subdomain A and B CYD28_RS10370 IPR029000 Cyclophilin-like domain superfamily CYD28_RS10375 IPR010016 KipI family CYD28_RS10375 IPR029000 Cyclophilin-like domain superfamily CYD28_RS10375 IPR003833 Carboxyltransferase domain, subdomain C and D CYD28_RS10390 IPR005802 Aminodeoxychorismate synthase, component I CYD28_RS10390 IPR005801 ADC synthase CYD28_RS10390 IPR015890 Chorismate-utilising enzyme, C-terminal CYD28_RS10390 IPR006805 Anthranilate synthase component I, N-terminal CYD28_RS10390 IPR019999 Anthranilate synthase component I-like CYD28_RS10395 IPR005940 Anthranilate phosphoribosyl transferase CYD28_RS10395 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain CYD28_RS10395 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily CYD28_RS10395 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily CYD28_RS10395 IPR017459 Glycosyl transferase family 3, N-terminal domain CYD28_RS10395 IPR000312 Glycosyl transferase, family 3 CYD28_RS10395 IPR029062 Class I glutamine amidotransferase-like CYD28_RS10395 IPR017926 Glutamine amidotransferase CYD28_RS10400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS10400 IPR018317 Queuosine biosynthesis protein QueC CYD28_RS10405 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily CYD28_RS10405 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family CYD28_RS10410 IPR013785 Aldolase-type TIM barrel CYD28_RS10410 IPR007197 Radical SAM CYD28_RS10410 IPR024924 7-carboxy-7-deazaguanine synthase-like CYD28_RS10410 IPR017742 7-carboxy-7-deazaguanine synthase CYD28_RS10420 IPR001173 Glycosyltransferase 2-like CYD28_RS10420 IPR029044 Nucleotide-diphospho-sugar transferases CYD28_RS10425 IPR012337 Ribonuclease H-like superfamily CYD28_RS10425 IPR001584 Integrase, catalytic core CYD28_RS10425 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS10430 IPR018170 Aldo/keto reductase, conserved site CYD28_RS10430 IPR023210 NADP-dependent oxidoreductase domain CYD28_RS10430 IPR036812 NADP-dependent oxidoreductase domain superfamily CYD28_RS10430 IPR020471 Aldo/keto reductase CYD28_RS10435 IPR036318 FAD-binding, type PCMH-like superfamily CYD28_RS10435 IPR000644 CBS domain CYD28_RS10435 IPR002550 CNNM, transmembrane domain CYD28_RS10435 IPR016169 FAD-binding, type PCMH, subdomain 2 CYD28_RS10435 IPR005170 Transporter-associated domain CYD28_RS10440 IPR006327 Phosphotransferase system, fructose IIC component CYD28_RS10440 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CYD28_RS10440 IPR013011 Phosphotransferase system, EIIB component, type 2 CYD28_RS10440 IPR004715 Phosphotransferase system, IIA component fructose subfamily CYD28_RS10440 IPR013014 Phosphotransferase system, EIIC component, type 2 CYD28_RS10440 IPR002178 PTS EIIA type-2 domain CYD28_RS10440 IPR036095 PTS system IIB component-like superfamily CYD28_RS10440 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CYD28_RS10440 IPR016152 Phosphotransferase/anion transporter CYD28_RS10445 IPR022463 Fructose 1-phosphate kinase CYD28_RS10445 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CYD28_RS10445 IPR011611 Carbohydrate kinase PfkB CYD28_RS10445 IPR017583 Tagatose/fructose phosphokinase CYD28_RS10445 IPR029056 Ribokinase-like CYD28_RS10450 IPR001034 DeoR-type HTH domain CYD28_RS10450 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS10450 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CYD28_RS10450 IPR037171 NagB/RpiA transferase-like CYD28_RS10450 IPR014036 DeoR C-terminal sensor domain CYD28_RS10455 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CYD28_RS10455 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily CYD28_RS10455 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CYD28_RS10465 IPR011701 Major facilitator superfamily CYD28_RS10465 IPR036259 MFS transporter superfamily CYD28_RS10465 IPR004734 Multidrug resistance protein CYD28_RS10465 IPR020846 Major facilitator superfamily domain CYD28_RS10465 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG CYD28_RS10495 IPR030676 Citrate carrier CitT-related CYD28_RS10495 IPR001898 Solute carrier family 13 CYD28_RS10505 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10505 IPR036627 CobW-like, C-terminal domain superfamily CYD28_RS10505 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CYD28_RS10505 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CYD28_RS10510 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS10510 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS10510 IPR023187 Transcriptional regulator MarR-type, conserved site CYD28_RS10510 IPR000835 MarR-type HTH domain CYD28_RS10515 IPR003439 ABC transporter-like CYD28_RS10515 IPR036640 ABC transporter type 1, transmembrane domain superfamily CYD28_RS10515 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC CYD28_RS10515 IPR003593 AAA+ ATPase domain CYD28_RS10515 IPR011527 ABC transporter type 1, transmembrane domain CYD28_RS10515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10515 IPR017871 ABC transporter, conserved site CYD28_RS10520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10520 IPR017871 ABC transporter, conserved site CYD28_RS10520 IPR003439 ABC transporter-like CYD28_RS10520 IPR036640 ABC transporter type 1, transmembrane domain superfamily CYD28_RS10520 IPR011527 ABC transporter type 1, transmembrane domain CYD28_RS10520 IPR003593 AAA+ ATPase domain CYD28_RS10520 IPR039421 Type I protein exporter CYD28_RS10520 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD CYD28_RS10525 IPR003824 Undecaprenyl-diphosphatase UppP CYD28_RS10535 IPR003791 Protein of unknown function UPF0178 CYD28_RS10540 IPR031100 LOG family CYD28_RS10540 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CYD28_RS10545 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS10545 IPR000182 GNAT domain CYD28_RS10560 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS10560 IPR000182 GNAT domain CYD28_RS10570 IPR007403 Protein of unknown function DUF456 CYD28_RS10575 IPR020846 Major facilitator superfamily domain CYD28_RS10575 IPR036259 MFS transporter superfamily CYD28_RS10575 IPR004750 Sugar efflux CYD28_RS10575 IPR011701 Major facilitator superfamily CYD28_RS10580 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS10580 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS10580 IPR000847 Transcription regulator HTH, LysR CYD28_RS10580 IPR005119 LysR, substrate-binding CYD28_RS10590 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CYD28_RS10590 IPR038071 UROD/MetE-like superfamily CYD28_RS10605 IPR002876 Transcriptional regulator TACO1-like CYD28_RS10605 IPR017856 Integrase-like, N-terminal CYD28_RS10605 IPR026564 Transcriptional regulator TACO1-like, domain 3 CYD28_RS10605 IPR029072 YebC-like CYD28_RS10605 IPR026562 Probable transcriptional regulatory protein YeeN CYD28_RS10610 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS10610 IPR010166 Transcriptional regulator SarA/Rot CYD28_RS10610 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS10615 IPR018060 DNA binding HTH domain, AraC-type CYD28_RS10615 IPR009057 Homeobox-like domain superfamily CYD28_RS10615 IPR020449 Transcription regulator HTH, AraC- type CYD28_RS10615 IPR018062 HTH domain AraC-type, conserved site CYD28_RS10625 IPR007921 CHAP domain CYD28_RS10625 IPR038765 Papain-like cysteine peptidase superfamily CYD28_RS10625 IPR036779 LysM domain superfamily CYD28_RS10625 IPR018392 LysM domain CYD28_RS10630 IPR001204 Phosphate transporter CYD28_RS10635 IPR018445 Putative phosphate transport regulator CYD28_RS10635 IPR038078 PhoU-like domain superfamily CYD28_RS10640 IPR027022 ABC transporter permease protein, BceB-type CYD28_RS10640 IPR003838 ABC transporter permease protein domain CYD28_RS10645 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10645 IPR003593 AAA+ ATPase domain CYD28_RS10645 IPR003439 ABC transporter-like CYD28_RS10650 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CYD28_RS10650 IPR036890 Histidine kinase/HSP90-like ATPase superfamily CYD28_RS10650 IPR005467 Histidine kinase domain CYD28_RS10650 IPR003594 Histidine kinase/HSP90-like ATPase CYD28_RS10650 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily CYD28_RS10655 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS10655 IPR016032 Signal transduction response regulator, C-terminal effector CYD28_RS10655 IPR011006 CheY-like superfamily CYD28_RS10655 IPR001789 Signal transduction response regulator, receiver domain CYD28_RS10655 IPR001867 OmpR/PhoB-type DNA-binding domain CYD28_RS10655 IPR039420 Transcriptional regulatory protein WalR-like CYD28_RS10675 IPR038728 Uncharacterized membrane protein YkvI CYD28_RS10685 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain CYD28_RS10685 IPR039643 Dihydroxyacetone kinase phosphotransferase subunit DhaM CYD28_RS10685 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily CYD28_RS10685 IPR004701 Phosphotransferase system, mannose-type IIA component CYD28_RS10690 IPR036117 DhaL domain superfamily CYD28_RS10690 IPR004007 DhaL domain CYD28_RS10690 IPR012737 Dihydroxyacetone kinase, subunit L CYD28_RS10695 IPR004006 DhaK domain CYD28_RS10695 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 CYD28_RS10700 IPR000522 ABC transporter, permease protein, BtuC-like CYD28_RS10700 IPR037294 ABC transporter, BtuC-like CYD28_RS10705 IPR000522 ABC transporter, permease protein, BtuC-like CYD28_RS10705 IPR037294 ABC transporter, BtuC-like CYD28_RS10710 IPR003593 AAA+ ATPase domain CYD28_RS10710 IPR003439 ABC transporter-like CYD28_RS10710 IPR017871 ABC transporter, conserved site CYD28_RS10710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10715 IPR003740 Uncharacterised membrane protein YitT CYD28_RS10715 IPR019264 Domain of unknown function DUF2179 CYD28_RS10715 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CYD28_RS10720 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CYD28_RS10720 IPR008276 Concentrative nucleoside transporter CYD28_RS10720 IPR011657 Concentrative nucleoside transporter C-terminal domain CYD28_RS10720 IPR002668 Concentrative nucleoside transporter N-terminal domain CYD28_RS10725 IPR007554 CDP-glycerol glycerophosphotransferase CYD28_RS10725 IPR001173 Glycosyltransferase 2-like CYD28_RS10725 IPR029044 Nucleotide-diphospho-sugar transferases CYD28_RS10735 IPR036640 ABC transporter type 1, transmembrane domain superfamily CYD28_RS10735 IPR011527 ABC transporter type 1, transmembrane domain CYD28_RS10735 IPR003439 ABC transporter-like CYD28_RS10735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10735 IPR039421 Type I protein exporter CYD28_RS10735 IPR003593 AAA+ ATPase domain CYD28_RS10735 IPR017871 ABC transporter, conserved site CYD28_RS10740 IPR001207 Transposase, mutator type CYD28_RS10745 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CYD28_RS10745 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CYD28_RS10745 IPR015956 Penicillin-binding protein, C-terminal domain superfamily CYD28_RS10745 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CYD28_RS10745 IPR012338 Beta-lactamase/transpeptidase-like CYD28_RS10745 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily CYD28_RS10750 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS10750 IPR006409 Glycerol-3-phosphate cytidylyltransferase CYD28_RS10750 IPR004821 Cytidyltransferase-like domain CYD28_RS10755 IPR029044 Nucleotide-diphospho-sugar transferases CYD28_RS10755 IPR001173 Glycosyltransferase 2-like CYD28_RS10760 IPR007554 CDP-glycerol glycerophosphotransferase CYD28_RS10765 IPR013525 ABC-2 type transporter CYD28_RS10765 IPR000412 ABC-2 transporter CYD28_RS10770 IPR003593 AAA+ ATPase domain CYD28_RS10770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS10770 IPR015860 ABC transporter, teichoic acids export, TagH CYD28_RS10770 IPR017871 ABC transporter, conserved site CYD28_RS10770 IPR003439 ABC transporter-like CYD28_RS10775 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase CYD28_RS10775 IPR004629 Glycosyl transferase WecB/TagA/CpsF CYD28_RS10785 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS10785 IPR012337 Ribonuclease H-like superfamily CYD28_RS10785 IPR001584 Integrase, catalytic core CYD28_RS10790 IPR001367 Iron dependent repressor, metal binding and dimerisation domain CYD28_RS10790 IPR007167 Ferrous iron transporter FeoA domain CYD28_RS10790 IPR040767 Diphteria toxin repressor, SH3 domain CYD28_RS10790 IPR038157 Ferrous iron transporter, core domain CYD28_RS10790 IPR022687 DTXR-type HTH domain CYD28_RS10790 IPR022689 Iron dependent repressor CYD28_RS10790 IPR008988 Transcriptional repressor, C-terminal CYD28_RS10790 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS10790 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS10790 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily CYD28_RS10795 IPR002014 VHS domain CYD28_RS10795 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria CYD28_RS10795 IPR018422 Cation/H+ exchanger, CPA1 family CYD28_RS10795 IPR006153 Cation/H+ exchanger CYD28_RS10800 IPR011650 Peptidase M20, dimerisation domain CYD28_RS10800 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase CYD28_RS10800 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CYD28_RS10800 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS10800 IPR002933 Peptidase M20 CYD28_RS10815 IPR005133 Na+/H+ antiporter subunit G CYD28_RS10820 IPR007208 Na(+)/H(+) antiporter subunit F-like CYD28_RS10825 IPR002758 Na+/H+ antiporter subunit E CYD28_RS10830 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CYD28_RS10830 IPR003918 NADH:ubiquinone oxidoreductase CYD28_RS10835 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like CYD28_RS10840 IPR007182 Na+/H+ antiporter MnhB subunit-related protein CYD28_RS10845 IPR025383 Domain of unknown function DUF4040 CYD28_RS10845 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CYD28_RS10845 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CYD28_RS10850 IPR002104 Integrase, catalytic domain CYD28_RS10850 IPR011010 DNA breaking-rejoining enzyme, catalytic core CYD28_RS10850 IPR010998 Integrase/recombinase, N-terminal CYD28_RS10850 IPR004107 Integrase, SAM-like, N-terminal CYD28_RS10850 IPR013762 Integrase-like, catalytic domain superfamily CYD28_RS10875 IPR010166 Transcriptional regulator SarA/Rot CYD28_RS10875 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS10875 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS10880 IPR012337 Ribonuclease H-like superfamily CYD28_RS10880 IPR001584 Integrase, catalytic core CYD28_RS10880 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS10885 IPR029058 Alpha/Beta hydrolase fold CYD28_RS10885 IPR000073 Alpha/beta hydrolase fold-1 CYD28_RS10885 IPR002410 Peptidase S33 CYD28_RS10885 IPR005945 Proline-specific peptidase CYD28_RS10905 IPR041492 Haloacid dehalogenase-like hydrolase CYD28_RS10905 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CYD28_RS10905 IPR037512 Phosphoglycolate phosphatase, prokaryotic CYD28_RS10905 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic CYD28_RS10905 IPR006439 HAD hydrolase, subfamily IA CYD28_RS10905 IPR036412 HAD-like superfamily CYD28_RS10905 IPR023198 Phosphoglycolate phosphatase-like, domain 2 CYD28_RS10905 IPR023214 HAD superfamily CYD28_RS10910 IPR037294 ABC transporter, BtuC-like CYD28_RS10910 IPR000522 ABC transporter, permease protein, BtuC-like CYD28_RS10915 IPR002491 ABC transporter periplasmic binding domain CYD28_RS10930 IPR004036 Endonuclease III-like, conserved site-2 CYD28_RS10930 IPR005759 Endonuclease III CYD28_RS10930 IPR011257 DNA glycosylase CYD28_RS10930 IPR004035 Endonuclease III, iron-sulphur binding site CYD28_RS10930 IPR003265 HhH-GPD domain CYD28_RS10930 IPR000445 Helix-hairpin-helix motif CYD28_RS10930 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CYD28_RS10930 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CYD28_RS10935 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CYD28_RS10935 IPR001278 Arginine-tRNA ligase CYD28_RS10935 IPR005148 Arginyl tRNA synthetase N-terminal domain CYD28_RS10935 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily CYD28_RS10935 IPR008909 DALR anticodon binding CYD28_RS10935 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS10935 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CYD28_RS10935 IPR035684 Arginyl-tRNA synthetase, catalytic core domain CYD28_RS10980 IPR001207 Transposase, mutator type CYD28_RS10985 IPR006464 N-acetyltransferase RimI/Ard1 CYD28_RS10985 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS10985 IPR000182 GNAT domain CYD28_RS10990 IPR011009 Protein kinase-like domain superfamily CYD28_RS10990 IPR000182 GNAT domain CYD28_RS10990 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS10990 IPR002575 Aminoglycoside phosphotransferase CYD28_RS10995 IPR001207 Transposase, mutator type CYD28_RS11005 IPR003593 AAA+ ATPase domain CYD28_RS11005 IPR017871 ABC transporter, conserved site CYD28_RS11005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11005 IPR003439 ABC transporter-like CYD28_RS11010 IPR003593 AAA+ ATPase domain CYD28_RS11010 IPR000014 PAS domain CYD28_RS11010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11010 IPR003439 ABC transporter-like CYD28_RS11010 IPR017871 ABC transporter, conserved site CYD28_RS11015 IPR011009 Protein kinase-like domain superfamily CYD28_RS11015 IPR002575 Aminoglycoside phosphotransferase CYD28_RS11020 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CYD28_RS11020 IPR006120 Resolvase, HTH domain CYD28_RS11020 IPR006118 Recombinase, conserved site CYD28_RS11020 IPR006119 Resolvase, N-terminal catalytic domain CYD28_RS11025 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CYD28_RS11025 IPR013571 Transcription regulator QacR, C-terminal CYD28_RS11025 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CYD28_RS11025 IPR001647 DNA-binding HTH domain, TetR-type CYD28_RS11025 IPR009057 Homeobox-like domain superfamily CYD28_RS11030 IPR005829 Sugar transporter, conserved site CYD28_RS11030 IPR011701 Major facilitator superfamily CYD28_RS11030 IPR020846 Major facilitator superfamily domain CYD28_RS11030 IPR036259 MFS transporter superfamily CYD28_RS11040 IPR001207 Transposase, mutator type CYD28_RS11070 IPR011991 ArsR-like helix-turn-helix domain CYD28_RS11070 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS11070 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS11070 IPR018334 ArsR-type transcription regulator, HTH motif CYD28_RS11070 IPR001845 HTH ArsR-type DNA-binding domain CYD28_RS11075 IPR012337 Ribonuclease H-like superfamily CYD28_RS11075 IPR036397 Ribonuclease H superfamily CYD28_RS11075 IPR001584 Integrase, catalytic core CYD28_RS11075 IPR032874 DDE domain CYD28_RS11080 IPR014852 Uncharacterised protein YwhD CYD28_RS11085 IPR003607 HD/PDEase domain CYD28_RS11085 IPR006674 HD domain CYD28_RS11095 IPR005025 NADPH-dependent FMN reductase-like CYD28_RS11095 IPR029039 Flavoprotein-like superfamily CYD28_RS11100 IPR020471 Aldo/keto reductase CYD28_RS11100 IPR023210 NADP-dependent oxidoreductase domain CYD28_RS11100 IPR036812 NADP-dependent oxidoreductase domain superfamily CYD28_RS11100 IPR018170 Aldo/keto reductase, conserved site CYD28_RS11110 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I CYD28_RS11110 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CYD28_RS11110 IPR023753 FAD/NAD(P)-binding domain CYD28_RS11110 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily CYD28_RS11110 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS11110 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CYD28_RS11115 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS11115 IPR012156 Cold shock, CspA CYD28_RS11115 IPR002059 Cold-shock protein, DNA-binding CYD28_RS11115 IPR019844 Cold-shock (CSD) domain CYD28_RS11115 IPR011129 Cold shock domain CYD28_RS11120 IPR009910 Protein of unknown function DUF1450 CYD28_RS11120 IPR020880 Protein of unknown function UPF0741 CYD28_RS11125 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS11125 IPR001584 Integrase, catalytic core CYD28_RS11125 IPR012337 Ribonuclease H-like superfamily CYD28_RS11130 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS11130 IPR036554 GHMP kinase, C-terminal domain superfamily CYD28_RS11130 IPR035102 Phosphomevalonate kinase CYD28_RS11130 IPR013750 GHMP kinase, C-terminal domain CYD28_RS11130 IPR005917 Phosphomevalonate kinase, bacteria CYD28_RS11130 IPR006204 GHMP kinase N-terminal domain CYD28_RS11130 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS11140 IPR006203 GHMP kinase, ATP-binding, conserved site CYD28_RS11140 IPR000870 Homoserine kinase CYD28_RS11140 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS11140 IPR006204 GHMP kinase N-terminal domain CYD28_RS11140 IPR036554 GHMP kinase, C-terminal domain superfamily CYD28_RS11140 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS11140 IPR013750 GHMP kinase, C-terminal domain CYD28_RS11145 IPR024897 Octanoyltransferase LipL CYD28_RS11145 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain CYD28_RS11150 IPR012147 Phosphate acetyl/butyryltransferase CYD28_RS11150 IPR002505 Phosphate acetyl/butaryl transferase CYD28_RS11150 IPR042112 Phosphate acetyltransferase, domain 2 CYD28_RS11150 IPR042113 Phosphate acetyltransferase, domain 1 CYD28_RS11150 IPR004614 Phosphate acetyltransferase CYD28_RS11160 IPR010619 Putative threonine/serine exporter CYD28_RS11170 IPR002293 Amino acid/polyamine transporter I CYD28_RS11175 IPR006696 Protein of unknown function DUF423 CYD28_RS11185 IPR005122 Uracil-DNA glycosylase-like CYD28_RS11185 IPR036895 Uracil-DNA glycosylase-like domain superfamily CYD28_RS11185 IPR002043 Uracil-DNA glycosylase family 1 CYD28_RS11185 IPR018085 Uracil-DNA glycosylase, active site CYD28_RS11190 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CYD28_RS11190 IPR029056 Ribokinase-like CYD28_RS11190 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CYD28_RS11195 IPR035374 Protein VraX CYD28_RS11210 IPR016994 Uncharacterised conserved protein UCP032370, VraC CYD28_RS11215 IPR002155 Thiolase CYD28_RS11215 IPR020616 Thiolase, N-terminal CYD28_RS11215 IPR016039 Thiolase-like CYD28_RS11215 IPR020613 Thiolase, conserved site CYD28_RS11215 IPR020617 Thiolase, C-terminal CYD28_RS11220 IPR025110 AMP-binding enzyme, C-terminal domain CYD28_RS11220 IPR042099 AMP-dependent synthetase-like superfamily CYD28_RS11220 IPR000873 AMP-dependent synthetase/ligase CYD28_RS11220 IPR020845 AMP-binding, conserved site CYD28_RS11225 IPR019079 Capsule synthesis protein, CapA CYD28_RS11225 IPR029052 Metallo-dependent phosphatase-like CYD28_RS11270 IPR001207 Transposase, mutator type CYD28_RS11275 IPR001347 Sugar isomerase (SIS) CYD28_RS11275 IPR017552 3-hexulose-6-phosphate isomerase CYD28_RS11280 IPR041710 HPS/KGPDC domain CYD28_RS11280 IPR013785 Aldolase-type TIM barrel CYD28_RS11280 IPR017553 3-hexulose-6-phosphate synthase CYD28_RS11280 IPR011060 Ribulose-phosphate binding barrel CYD28_RS11280 IPR001754 Orotidine 5'-phosphate decarboxylase domain CYD28_RS11290 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 CYD28_RS11290 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CYD28_RS11290 IPR024078 Putative deacetylase LmbE-like domain superfamily CYD28_RS11295 IPR022838 GTP cyclohydrolase FolE2 CYD28_RS11295 IPR003801 GTP cyclohydrolase FolE2/MptA CYD28_RS11325 IPR041171 SDR-like Ig domain CYD28_RS11325 IPR041171 SDR-like Ig domain CYD28_RS11325 IPR019931 LPXTG cell wall anchor domain CYD28_RS11325 IPR033764 SD-repeat containing protein, B domain CYD28_RS11325 IPR005877 YSIRK Gram-positive signal peptide CYD28_RS11325 IPR011266 Fibrinogen-binding domain 2 CYD28_RS11325 IPR013783 Immunoglobulin-like fold CYD28_RS11325 IPR019948 Gram-positive LPXTG cell wall anchor CYD28_RS11325 IPR011252 Fibrogen-binding domain 1 CYD28_RS11325 IPR005877 YSIRK Gram-positive signal peptide CYD28_RS11325 IPR008966 Adhesion domain superfamily CYD28_RS11325 IPR033764 SD-repeat containing protein, B domain CYD28_RS11325 IPR019931 LPXTG cell wall anchor domain CYD28_RS11325 IPR013783 Immunoglobulin-like fold CYD28_RS11325 IPR019948 Gram-positive LPXTG cell wall anchor CYD28_RS11325 IPR011252 Fibrogen-binding domain 1 CYD28_RS11325 IPR008966 Adhesion domain superfamily CYD28_RS11325 IPR011266 Fibrinogen-binding domain 2 CYD28_RS11335 IPR029039 Flavoprotein-like superfamily CYD28_RS11335 IPR005025 NADPH-dependent FMN reductase-like CYD28_RS11340 IPR023214 HAD superfamily CYD28_RS11340 IPR000150 Cof family CYD28_RS11340 IPR006379 HAD-superfamily hydrolase, subfamily IIB CYD28_RS11340 IPR036412 HAD-like superfamily CYD28_RS11345 IPR016192 APOBEC/CMP deaminase, zinc-binding CYD28_RS11345 IPR028883 tRNA-specific adenosine deaminase CYD28_RS11345 IPR002125 Cytidine and deoxycytidylate deaminase domain CYD28_RS11345 IPR016193 Cytidine deaminase-like CYD28_RS11350 IPR002624 Deoxynucleoside kinase CYD28_RS11350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11350 IPR031314 Deoxynucleoside kinase domain CYD28_RS11355 IPR031314 Deoxynucleoside kinase domain CYD28_RS11355 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11355 IPR002624 Deoxynucleoside kinase CYD28_RS11375 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS11375 IPR000182 GNAT domain CYD28_RS11400 IPR033939 Branched-chain aminotransferase CYD28_RS11400 IPR001544 Aminotransferase class IV CYD28_RS11400 IPR018300 Aminotransferase, class IV, conserved site CYD28_RS11400 IPR036038 Aminotransferase-like, PLP-dependent enzymes CYD28_RS11400 IPR005786 Branched-chain amino acid aminotransferase II CYD28_RS11405 IPR001509 NAD-dependent epimerase/dehydratase CYD28_RS11405 IPR036291 NAD(P)-binding domain superfamily CYD28_RS11410 IPR029052 Metallo-dependent phosphatase-like CYD28_RS11410 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type CYD28_RS11410 IPR006179 5'-Nucleotidase/apyrase CYD28_RS11410 IPR006146 5'-Nucleotidase, conserved site CYD28_RS11410 IPR008334 5'-Nucleotidase, C-terminal CYD28_RS11410 IPR036907 5'-Nucleotidase, C-terminal domain superfamily CYD28_RS11415 IPR036291 NAD(P)-binding domain superfamily CYD28_RS11415 IPR023401 Ornithine cyclodeaminase, N-terminal CYD28_RS11415 IPR003462 Ornithine cyclodeaminase/mu-crystallin CYD28_RS11420 IPR036412 HAD-like superfamily CYD28_RS11420 IPR006357 HAD-superfamily hydrolase, subfamily IIA CYD28_RS11420 IPR015797 NUDIX hydrolase-like domain superfamily CYD28_RS11420 IPR023214 HAD superfamily CYD28_RS11420 IPR020084 NUDIX hydrolase, conserved site CYD28_RS11420 IPR000086 NUDIX hydrolase domain CYD28_RS11420 IPR020476 NUDIX hydrolase CYD28_RS11430 IPR004839 Aminotransferase, class I/classII CYD28_RS11430 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type CYD28_RS11430 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS11430 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS11430 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CYD28_RS11430 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS11435 IPR011650 Peptidase M20, dimerisation domain CYD28_RS11435 IPR017439 Amidohydrolase CYD28_RS11435 IPR036264 Bacterial exopeptidase dimerisation domain CYD28_RS11435 IPR002933 Peptidase M20 CYD28_RS11440 IPR009000 Translation protein, beta-barrel domain superfamily CYD28_RS11440 IPR004161 Translation elongation factor EFTu-like, domain 2 CYD28_RS11440 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain CYD28_RS11440 IPR000795 Transcription factor, GTP-binding domain CYD28_RS11440 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CYD28_RS11440 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CYD28_RS11440 IPR005225 Small GTP-binding protein domain CYD28_RS11440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11440 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CYD28_RS11440 IPR031157 Tr-type G domain, conserved site CYD28_RS11440 IPR033720 Elongation factor Tu, domain 2 CYD28_RS11445 IPR004161 Translation elongation factor EFTu-like, domain 2 CYD28_RS11445 IPR000795 Transcription factor, GTP-binding domain CYD28_RS11445 IPR031157 Tr-type G domain, conserved site CYD28_RS11445 IPR035649 EFG, domain V CYD28_RS11445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11445 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS11445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS11445 IPR005225 Small GTP-binding protein domain CYD28_RS11445 IPR009022 Elongation factor G, domain III CYD28_RS11445 IPR000640 Elongation factor EFG, domain V-like CYD28_RS11445 IPR041095 Elongation Factor G, domain II CYD28_RS11445 IPR009000 Translation protein, beta-barrel domain superfamily CYD28_RS11445 IPR004540 Translation elongation factor EFG/EF2 CYD28_RS11445 IPR005517 Translation elongation factor EFG/EF2, domain IV CYD28_RS11445 IPR035647 EF-G domain III/V-like CYD28_RS11450 IPR020606 Ribosomal protein S7, conserved site CYD28_RS11450 IPR000235 Ribosomal protein S5/S7 CYD28_RS11450 IPR036823 Ribosomal protein S7 domain superfamily CYD28_RS11450 IPR005717 Ribosomal protein S7, bacterial/organellar-type CYD28_RS11450 IPR023798 Ribosomal protein S7 domain CYD28_RS11455 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS11455 IPR006032 Ribosomal protein S12/S23 CYD28_RS11455 IPR005679 Ribosomal protein S12, bacterial-type CYD28_RS11460 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CYD28_RS11460 IPR023460 Ribosomal protein L7Ae, putative CYD28_RS11460 IPR029064 50S ribosomal protein L30e-like CYD28_RS11465 IPR042102 RNA polymerase Rpb1, domain 3 superfamily CYD28_RS11465 IPR006592 RNA polymerase, N-terminal CYD28_RS11465 IPR007080 RNA polymerase Rpb1, domain 1 CYD28_RS11465 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CYD28_RS11465 IPR007083 RNA polymerase Rpb1, domain 4 CYD28_RS11465 IPR007066 RNA polymerase Rpb1, domain 3 CYD28_RS11465 IPR007081 RNA polymerase Rpb1, domain 5 CYD28_RS11465 IPR038120 RNA polymerase Rpb1, funnel domain superfamily CYD28_RS11465 IPR000722 RNA polymerase, alpha subunit CYD28_RS11470 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily CYD28_RS11470 IPR007642 RNA polymerase Rpb2, domain 2 CYD28_RS11470 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CYD28_RS11470 IPR037034 RNA polymerase Rpb2, domain 2 superfamily CYD28_RS11470 IPR015712 DNA-directed RNA polymerase, subunit 2 CYD28_RS11470 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain CYD28_RS11470 IPR007644 RNA polymerase, beta subunit, protrusion CYD28_RS11470 IPR007645 RNA polymerase Rpb2, domain 3 CYD28_RS11470 IPR007121 RNA polymerase, beta subunit, conserved site CYD28_RS11470 IPR007641 RNA polymerase Rpb2, domain 7 CYD28_RS11470 IPR014724 RNA polymerase Rpb2, OB-fold CYD28_RS11470 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type CYD28_RS11475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS11475 IPR007848 Methyltransferase small domain CYD28_RS11480 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily CYD28_RS11480 IPR008932 Ribosomal protein L7/L12, oligomerisation CYD28_RS11480 IPR013823 Ribosomal protein L7/L12, C-terminal CYD28_RS11480 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CYD28_RS11480 IPR000206 Ribosomal protein L7/L12 CYD28_RS11485 IPR022973 Ribosomal protein L10 CYD28_RS11485 IPR001790 Ribosomal protein L10P CYD28_RS11485 IPR002363 Ribosomal protein L10, eubacterial, conserved site CYD28_RS11490 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS11490 IPR012337 Ribonuclease H-like superfamily CYD28_RS11490 IPR001584 Integrase, catalytic core CYD28_RS11495 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CYD28_RS11495 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CYD28_RS11495 IPR002143 Ribosomal protein L1 CYD28_RS11495 IPR005878 Ribosomal protein L1, bacterial-type CYD28_RS11495 IPR023674 Ribosomal protein L1-like CYD28_RS11495 IPR023673 Ribosomal protein L1, conserved site CYD28_RS11500 IPR020784 Ribosomal protein L11, N-terminal CYD28_RS11500 IPR000911 Ribosomal protein L11/L12 CYD28_RS11500 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily CYD28_RS11500 IPR006519 Ribosomal protein L11, bacterial-type CYD28_RS11500 IPR020783 Ribosomal protein L11, C-terminal CYD28_RS11500 IPR036769 Ribosomal protein L11, C-terminal domain superfamily CYD28_RS11505 IPR001062 Transcription antitermination protein, NusG CYD28_RS11505 IPR014722 Ribosomal protein L2, domain 2 CYD28_RS11505 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CYD28_RS11505 IPR006645 NusG, N-terminal CYD28_RS11505 IPR036735 NusG, N-terminal domain superfamily CYD28_RS11505 IPR008991 Translation protein SH3-like domain superfamily CYD28_RS11510 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CYD28_RS11510 IPR005807 SecE subunit of protein translocation complex, bacterial-like CYD28_RS11510 IPR038379 SecE superfamily CYD28_RS11515 IPR038584 Ribosomal protein L33 superfamily CYD28_RS11515 IPR001705 Ribosomal protein L33 CYD28_RS11515 IPR018264 Ribosomal protein L33, conserved site CYD28_RS11515 IPR011332 Zinc-binding ribosomal protein CYD28_RS11525 IPR010298 Protein of unknown function DUF901 CYD28_RS11530 IPR029028 Alpha/beta knot methyltransferases CYD28_RS11530 IPR001537 tRNA/rRNA methyltransferase, SpoU type CYD28_RS11530 IPR004441 RNA methyltransferase TrmH family CYD28_RS11530 IPR029064 50S ribosomal protein L30e-like CYD28_RS11530 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CYD28_RS11530 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CYD28_RS11535 IPR036389 Ribonuclease III, endonuclease domain superfamily CYD28_RS11535 IPR000999 Ribonuclease III domain CYD28_RS11535 IPR008226 Mini-ribonuclease 3 family CYD28_RS11540 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CYD28_RS11540 IPR015803 Cysteine-tRNA ligase CYD28_RS11540 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS11540 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CYD28_RS11540 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CYD28_RS11540 IPR032678 tRNA synthetases class I, catalytic domain CYD28_RS11545 IPR042122 Serine acetyltransferase, N-terminal domain superfamily CYD28_RS11545 IPR018357 Hexapeptide transferase, conserved site CYD28_RS11545 IPR001451 Hexapeptide repeat CYD28_RS11545 IPR005881 Serine O-acetyltransferase CYD28_RS11545 IPR011004 Trimeric LpxA-like superfamily CYD28_RS11550 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CYD28_RS11550 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CYD28_RS11550 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CYD28_RS11550 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CYD28_RS11550 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CYD28_RS11550 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CYD28_RS11550 IPR033910 Glutamyl-tRNA synthetase CYD28_RS11550 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS11555 IPR002792 TRAM domain CYD28_RS11555 IPR029060 PIN-like domain superfamily CYD28_RS11555 IPR002716 PIN domain CYD28_RS11560 IPR003593 AAA+ ATPase domain CYD28_RS11560 IPR041166 LapB, rubredoxin metal binding domain CYD28_RS11560 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS11560 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain CYD28_RS11560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11560 IPR004504 DNA repair protein RadA CYD28_RS11560 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS11565 IPR028299 ClpA/B, conserved site 2 CYD28_RS11565 IPR041546 ClpA/ClpB, AAA lid domain CYD28_RS11565 IPR018368 ClpA/B, conserved site 1 CYD28_RS11565 IPR003959 ATPase, AAA-type, core CYD28_RS11565 IPR001270 ClpA/B family CYD28_RS11565 IPR004176 Clp, N-terminal CYD28_RS11565 IPR036628 Clp, N-terminal domain superfamily CYD28_RS11565 IPR019489 Clp ATPase, C-terminal CYD28_RS11565 IPR003593 AAA+ ATPase domain CYD28_RS11565 IPR001943 UVR domain CYD28_RS11565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11570 IPR022415 ATP:guanido phosphotransferase active site CYD28_RS11570 IPR000749 ATP:guanido phosphotransferase CYD28_RS11570 IPR023660 Protein arginine kinase CYD28_RS11570 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CYD28_RS11570 IPR022414 ATP:guanido phosphotransferase, catalytic domain CYD28_RS11575 IPR001510 Zinc finger, PARP-type CYD28_RS11575 IPR025542 YacH protein CYD28_RS11575 IPR001943 UVR domain CYD28_RS11580 IPR041473 CtsR, C-terminal dimerization domain CYD28_RS11580 IPR041902 CtsR, N-terminal domain superfamily CYD28_RS11580 IPR040465 CtsR, N-terminal HTH domain CYD28_RS11580 IPR041908 CtsR, C-terminal domain superfamily CYD28_RS11580 IPR008463 Transcriptional regulator CtsR CYD28_RS11585 IPR008276 Concentrative nucleoside transporter CYD28_RS11585 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CYD28_RS11585 IPR011657 Concentrative nucleoside transporter C-terminal domain CYD28_RS11585 IPR002668 Concentrative nucleoside transporter N-terminal domain CYD28_RS11590 IPR029062 Class I glutamine amidotransferase-like CYD28_RS11590 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO CYD28_RS11590 IPR021196 PdxT/SNO family, conserved site CYD28_RS11595 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ CYD28_RS11595 IPR033755 PdxS/SNZ N-terminal domain CYD28_RS11595 IPR013785 Aldolase-type TIM barrel CYD28_RS11595 IPR011060 Ribulose-phosphate binding barrel CYD28_RS11600 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS11600 IPR000524 Transcription regulator HTH, GntR CYD28_RS11600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS11600 IPR004839 Aminotransferase, class I/classII CYD28_RS11600 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS11600 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS11605 IPR032808 DoxX family CYD28_RS11690 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CYD28_RS11690 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CYD28_RS11690 IPR006195 Aminoacyl-tRNA synthetase, class II CYD28_RS11690 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CYD28_RS11690 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS11690 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II CYD28_RS11690 IPR002313 Lysine-tRNA ligase, class II CYD28_RS11695 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily CYD28_RS11695 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CYD28_RS11700 IPR006156 Dihydroneopterin aldolase CYD28_RS11700 IPR006157 Dihydroneopterin aldolase/epimerase domain CYD28_RS11705 IPR006390 Dihydropteroate synthase CYD28_RS11705 IPR011005 Dihydropteroate synthase-like CYD28_RS11705 IPR000489 Pterin-binding domain CYD28_RS11710 IPR005859 Cysteine synthase CysK CYD28_RS11710 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CYD28_RS11710 IPR005856 Cysteine synthase CYD28_RS11710 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYD28_RS11710 IPR001926 Pyridoxal-phosphate dependent enzyme CYD28_RS11715 IPR000397 Heat shock protein Hsp33 CYD28_RS11715 IPR016154 Heat shock protein Hsp33, C-terminal CYD28_RS11715 IPR016153 Heat shock protein Hsp33, N-terminal CYD28_RS11720 IPR003593 AAA+ ATPase domain CYD28_RS11720 IPR041569 AAA ATPase, AAA+ lid domain CYD28_RS11720 IPR003959 ATPase, AAA-type, core CYD28_RS11720 IPR003960 ATPase, AAA-type, conserved site CYD28_RS11720 IPR005936 Peptidase, FtsH CYD28_RS11720 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11720 IPR011546 Peptidase M41, FtsH extracellular CYD28_RS11720 IPR000642 Peptidase M41 CYD28_RS11720 IPR037219 Peptidase M41-like CYD28_RS11730 IPR012094 tRNA(Ile)-lysidine synthase CYD28_RS11730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS11730 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CYD28_RS11730 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal CYD28_RS11730 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal CYD28_RS11735 IPR022967 RNA-binding domain, S1 CYD28_RS11735 IPR003029 S1 domain CYD28_RS11735 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS11745 IPR036986 RNA-binding S4 domain superfamily CYD28_RS11745 IPR025490 RNA-binding protein, HP1423 type CYD28_RS11745 IPR002942 RNA-binding S4 domain CYD28_RS11750 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted CYD28_RS11750 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CYD28_RS11750 IPR035013 YabN, N-terminal CYD28_RS11750 IPR000878 Tetrapyrrole methylase CYD28_RS11750 IPR035996 Tetrapyrrole methylase superfamily CYD28_RS11750 IPR014777 Tetrapyrrole methylase, subdomain 1 CYD28_RS11750 IPR011551 NTP pyrophosphohydrolase MazG CYD28_RS11755 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CYD28_RS11755 IPR002797 Polysaccharide biosynthesis protein CYD28_RS11755 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type CYD28_RS11760 IPR004576 Transcription-repair coupling factor CYD28_RS11760 IPR041471 UvrB, interaction domain CYD28_RS11760 IPR005118 Transcription-repair-coupling factor, C-terminal domain CYD28_RS11760 IPR037235 TRCF-like, C-terminal domain CYD28_RS11760 IPR003711 CarD-like/TRCF domain CYD28_RS11760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11760 IPR014001 Helicase superfamily 1/2, ATP-binding domain CYD28_RS11760 IPR001650 Helicase, C-terminal CYD28_RS11760 IPR011545 DEAD/DEAH box helicase domain CYD28_RS11760 IPR036101 CarD-like/TRCF domain superfamily CYD28_RS11765 IPR001328 Peptidyl-tRNA hydrolase CYD28_RS11765 IPR018171 Peptidyl-tRNA hydrolase, conserved site CYD28_RS11765 IPR036416 Peptidyl-tRNA hydrolase superfamily CYD28_RS11770 IPR020057 Ribosomal protein L25, beta domain CYD28_RS11770 IPR037121 Ribosomal protein L25, C-terminal CYD28_RS11770 IPR001021 Ribosomal protein L25, long-form CYD28_RS11770 IPR029751 Ribosomal protein L25 CYD28_RS11770 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily CYD28_RS11770 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal CYD28_RS11775 IPR029057 Phosphoribosyltransferase-like CYD28_RS11775 IPR000836 Phosphoribosyltransferase domain CYD28_RS11775 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CYD28_RS11775 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CYD28_RS11775 IPR005946 Ribose-phosphate pyrophosphokinase CYD28_RS11775 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type CYD28_RS11780 IPR029044 Nucleotide-diphospho-sugar transferases CYD28_RS11780 IPR011004 Trimeric LpxA-like superfamily CYD28_RS11780 IPR018357 Hexapeptide transferase, conserved site CYD28_RS11780 IPR005835 Nucleotidyl transferase domain CYD28_RS11780 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CYD28_RS11780 IPR038009 GlmU, C-terminal LbH domain CYD28_RS11780 IPR001451 Hexapeptide repeat CYD28_RS11785 IPR007170 Stage V sporulation protein G CYD28_RS11785 IPR036751 Stage V sporulation protein G superfamily CYD28_RS11790 IPR019897 RidA, conserved site CYD28_RS11790 IPR035959 RutC-like superfamily CYD28_RS11790 IPR006175 YjgF/YER057c/UK114 family CYD28_RS11790 IPR006056 RidA family CYD28_RS11795 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS11795 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS11795 IPR000836 Phosphoribosyltransferase domain CYD28_RS11795 IPR010078 Pur operon repressor CYD28_RS11795 IPR015265 Bacterial purine repressor, N-terminal CYD28_RS11795 IPR029057 Phosphoribosyltransferase-like CYD28_RS11800 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CYD28_RS11800 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS11800 IPR036554 GHMP kinase, C-terminal domain superfamily CYD28_RS11800 IPR013750 GHMP kinase, C-terminal domain CYD28_RS11800 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS11800 IPR006204 GHMP kinase N-terminal domain CYD28_RS11805 IPR009366 Protein Veg CYD28_RS11810 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS11810 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CYD28_RS11810 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CYD28_RS11810 IPR011530 Ribosomal RNA adenine dimethylase CYD28_RS11810 IPR023165 rRNA adenine dimethylase-like CYD28_RS11810 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CYD28_RS11815 IPR025156 Ribonuclease M5, C-terminal domain CYD28_RS11815 IPR034141 Ribonuclease M5-like, TOPRIM domain CYD28_RS11815 IPR006171 TOPRIM domain CYD28_RS11815 IPR004466 Ribonuclease M5 CYD28_RS11820 IPR001130 TatD family CYD28_RS11820 IPR032466 Metal-dependent hydrolase CYD28_RS11820 IPR015991 Uncharacterised hydrolase TatD-type CYD28_RS11820 IPR018228 Deoxyribonuclease, TatD-related, conserved site CYD28_RS11825 IPR023457 Methionine-tRNA synthetase, type 2 CYD28_RS11825 IPR014758 Methionyl-tRNA synthetase CYD28_RS11825 IPR015413 Methionyl/Leucyl tRNA synthetase CYD28_RS11825 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal CYD28_RS11825 IPR002547 tRNA-binding domain CYD28_RS11825 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain CYD28_RS11825 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding CYD28_RS11825 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CYD28_RS11825 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS11825 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CYD28_RS11825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS11825 IPR033911 Methioninyl-tRNA synthetase core domain CYD28_RS11830 IPR035996 Tetrapyrrole methylase superfamily CYD28_RS11830 IPR014776 Tetrapyrrole methylase, subdomain 2 CYD28_RS11830 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CYD28_RS11830 IPR014777 Tetrapyrrole methylase, subdomain 1 CYD28_RS11830 IPR000878 Tetrapyrrole methylase CYD28_RS11830 IPR008189 rRNA small subunit methyltransferase I CYD28_RS11835 IPR000305 GIY-YIG endonuclease CYD28_RS11835 IPR035901 GIY-YIG endonuclease superfamily CYD28_RS11840 IPR007848 Methyltransferase small domain CYD28_RS11840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS11845 IPR010377 Initiation control protein YabA CYD28_RS11850 IPR007557 PSP1, C-terminal CYD28_RS11855 IPR004622 DNA polymerase III, delta prime subunit CYD28_RS11855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11855 IPR015199 DNA polymerase III, delta subunit, C-terminal CYD28_RS11860 IPR011322 Nitrogen regulatory PII-like, alpha/beta CYD28_RS11860 IPR010375 Cyclic-di-AMP receptor CYD28_RS11860 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CYD28_RS11865 IPR039430 Thymidylate kinase-like domain CYD28_RS11865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11865 IPR018094 Thymidylate kinase CYD28_RS11865 IPR018095 Thymidylate kinase, conserved site CYD28_RS11870 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CYD28_RS11870 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS11870 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS11870 IPR000310 Orn/Lys/Arg decarboxylase, major domain CYD28_RS11870 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily CYD28_RS11875 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS11875 IPR000182 GNAT domain CYD28_RS11895 IPR023628 Recombination protein RecR, C4-type zinc finger CYD28_RS11895 IPR015967 Recombination protein RecR, conserved site CYD28_RS11895 IPR000093 DNA recombination protein RecR CYD28_RS11895 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CYD28_RS11895 IPR034137 RecR, TOPRIM domain CYD28_RS11895 IPR023627 Recombination protein RecR CYD28_RS11895 IPR006171 TOPRIM domain CYD28_RS11900 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily CYD28_RS11900 IPR004401 Nucleoid-associated protein YbaB/EbfC family CYD28_RS11905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS11905 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CYD28_RS11905 IPR012763 DNA polymerase III, subunit gamma/ tau CYD28_RS11905 IPR003593 AAA+ ATPase domain CYD28_RS11905 IPR001270 ClpA/B family CYD28_RS11905 IPR022754 DNA polymerase III, gamma subunit, domain III CYD28_RS11920 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily CYD28_RS11920 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS11920 IPR012770 Trehalose operon transcriptional repressor CYD28_RS11920 IPR011663 UbiC transcription regulator-associated CYD28_RS11920 IPR000524 Transcription regulator HTH, GntR CYD28_RS11920 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS11925 IPR013780 Glycosyl hydrolase, all-beta CYD28_RS11925 IPR017853 Glycoside hydrolase superfamily CYD28_RS11925 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CYD28_RS11925 IPR032091 Maltogenic Amylase, C-terminal CYD28_RS11925 IPR012769 Trehalose-6-phosphate hydrolase CYD28_RS11930 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component CYD28_RS11930 IPR036878 Glucose permease domain IIB CYD28_RS11930 IPR003352 Phosphotransferase system, EIIC CYD28_RS11930 IPR013013 Phosphotransferase system, EIIC component, type 1 CYD28_RS11930 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CYD28_RS11930 IPR001996 Phosphotransferase system, IIB component, type 1 CYD28_RS11930 IPR011296 Phosphotransferase system, trehalose-specific IIBC component CYD28_RS11940 IPR023753 FAD/NAD(P)-binding domain CYD28_RS11940 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS11940 IPR009051 Alpha-helical ferredoxin CYD28_RS11940 IPR028261 Dihydroprymidine dehydrogenase domain II CYD28_RS11940 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 CYD28_RS11945 IPR002932 Glutamate synthase domain CYD28_RS11945 IPR013785 Aldolase-type TIM barrel CYD28_RS11945 IPR002489 Glutamate synthase, alpha subunit, C-terminal CYD28_RS11945 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily CYD28_RS11945 IPR006982 Glutamate synthase, central-N CYD28_RS11945 IPR017932 Glutamine amidotransferase type 2 domain CYD28_RS11945 IPR029055 Nucleophile aminohydrolases, N-terminal CYD28_RS11970 IPR020084 NUDIX hydrolase, conserved site CYD28_RS11970 IPR022927 RNA pyrophosphohydrolase RppH CYD28_RS11970 IPR000086 NUDIX hydrolase domain CYD28_RS11970 IPR015797 NUDIX hydrolase-like domain superfamily CYD28_RS11970 IPR020476 NUDIX hydrolase CYD28_RS11980 IPR036779 LysM domain superfamily CYD28_RS11980 IPR007921 CHAP domain CYD28_RS11980 IPR018392 LysM domain CYD28_RS11980 IPR038765 Papain-like cysteine peptidase superfamily CYD28_RS11985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS11985 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CYD28_RS11985 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS11985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS11990 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme CYD28_RS11990 IPR001926 Pyridoxal-phosphate dependent enzyme CYD28_RS11990 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CYD28_RS12005 IPR037272 Sodium:neurotransmitter symporter superfamily CYD28_RS12005 IPR000175 Sodium:neurotransmitter symporter CYD28_RS12020 IPR012354 Esterase/lipase CYD28_RS12020 IPR022742 Serine aminopeptidase, S33 CYD28_RS12020 IPR029058 Alpha/Beta hydrolase fold CYD28_RS12030 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CYD28_RS12030 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily CYD28_RS12040 IPR018745 Domain of unknown function DUF2294 CYD28_RS12045 IPR018752 Uncharacterised protein family UPF0753 CYD28_RS12050 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal CYD28_RS12050 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit CYD28_RS12060 IPR009732 Protein of unknown function DUF1304 CYD28_RS12070 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS12070 IPR000182 GNAT domain CYD28_RS12075 IPR003445 Cation transporter CYD28_RS12075 IPR004772 TrkH potassium transport family CYD28_RS12085 IPR005335 Terminase small subunit CYD28_RS12085 IPR038713 Terminase small subunit, N-terminal domain superfamily CYD28_RS12085 IPR018925 Phage terminase small subunit CYD28_RS12100 IPR012337 Ribonuclease H-like superfamily CYD28_RS12100 IPR032874 DDE domain CYD28_RS12100 IPR001584 Integrase, catalytic core CYD28_RS12100 IPR036397 Ribonuclease H superfamily CYD28_RS12105 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS12105 IPR000525 Initiator Rep protein CYD28_RS12115 IPR036397 Ribonuclease H superfamily CYD28_RS12115 IPR012337 Ribonuclease H-like superfamily CYD28_RS12115 IPR032874 DDE domain CYD28_RS12115 IPR001584 Integrase, catalytic core CYD28_RS12140 IPR011009 Protein kinase-like domain superfamily CYD28_RS12140 IPR024165 Aminoglycoside 3-phosphotransferase CYD28_RS12140 IPR002575 Aminoglycoside phosphotransferase CYD28_RS12145 IPR008125 Streptothricin acetyltransferase CYD28_RS12145 IPR000182 GNAT domain CYD28_RS12145 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS12165 IPR032874 DDE domain CYD28_RS12165 IPR012337 Ribonuclease H-like superfamily CYD28_RS12165 IPR036397 Ribonuclease H superfamily CYD28_RS12165 IPR001584 Integrase, catalytic core CYD28_RS12170 IPR041919 Plasmid replication protein, C-terminal domain superfamily CYD28_RS12170 IPR002631 Plasmid replication protein CYD28_RS12175 IPR000390 Small multidrug resistance protein family CYD28_RS12180 IPR032874 DDE domain CYD28_RS12180 IPR012337 Ribonuclease H-like superfamily CYD28_RS12180 IPR001584 Integrase, catalytic core CYD28_RS12180 IPR036397 Ribonuclease H superfamily CYD28_RS12190 IPR023650 Beta-lactamase, class-A active site CYD28_RS12190 IPR000871 Beta-lactamase, class-A CYD28_RS12190 IPR012338 Beta-lactamase/transpeptidase-like CYD28_RS12190 IPR012640 Membrane lipoprotein, lipid attachment site CYD28_RS12195 IPR008756 Peptidase M56 CYD28_RS12195 IPR012338 Beta-lactamase/transpeptidase-like CYD28_RS12195 IPR001460 Penicillin-binding protein, transpeptidase CYD28_RS12200 IPR005650 BlaI transcriptional regulatory family CYD28_RS12200 IPR036390 Winged helix DNA-binding domain superfamily CYD28_RS12200 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS12205 IPR006118 Recombinase, conserved site CYD28_RS12205 IPR009057 Homeobox-like domain superfamily CYD28_RS12205 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CYD28_RS12205 IPR006120 Resolvase, HTH domain CYD28_RS12205 IPR006119 Resolvase, N-terminal catalytic domain CYD28_RS12210 IPR016161 Aldehyde/histidinol dehydrogenase CYD28_RS12210 IPR016162 Aldehyde dehydrogenase, N-terminal CYD28_RS12210 IPR015590 Aldehyde dehydrogenase domain CYD28_RS12210 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CYD28_RS12210 IPR016163 Aldehyde dehydrogenase, C-terminal CYD28_RS12210 IPR016160 Aldehyde dehydrogenase, cysteine active site CYD28_RS12220 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CYD28_RS12220 IPR013785 Aldolase-type TIM barrel CYD28_RS12275 IPR004778 Homoserine/Threonine efflux protein CYD28_RS12275 IPR001123 Amino acid exporter protein, LeuE-type CYD28_RS12280 IPR017578 Alpha-ribazole phosphatase, CobC CYD28_RS12280 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CYD28_RS12280 IPR013078 Histidine phosphatase superfamily, clade-1 CYD28_RS12280 IPR029033 Histidine phosphatase superfamily CYD28_RS12290 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS12290 IPR012081 Alkyl hydroperoxide reductase subunit F CYD28_RS12290 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CYD28_RS12290 IPR012336 Thioredoxin-like fold CYD28_RS12290 IPR023753 FAD/NAD(P)-binding domain CYD28_RS12290 IPR036249 Thioredoxin-like superfamily CYD28_RS12295 IPR017559 Alkyl hydroperoxide reductase subunit C CYD28_RS12295 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CYD28_RS12295 IPR036249 Thioredoxin-like superfamily CYD28_RS12295 IPR013766 Thioredoxin domain CYD28_RS12295 IPR024706 Peroxiredoxin, AhpC-type CYD28_RS12305 IPR029479 Nitroreductase CYD28_RS12305 IPR000415 Nitroreductase-like CYD28_RS12305 IPR016446 Flavin oxidoreductase Frp family CYD28_RS12310 IPR001991 Sodium:dicarboxylate symporter CYD28_RS12310 IPR036458 Sodium:dicarboxylate symporter superfamily CYD28_RS12325 IPR025889 General stress protein 17M-like domain CYD28_RS12330 IPR000836 Phosphoribosyltransferase domain CYD28_RS12330 IPR029057 Phosphoribosyltransferase-like CYD28_RS12330 IPR010079 Xanthine phosphoribosyltransferase CYD28_RS12335 IPR017588 Uric acid permease UacT-like CYD28_RS12335 IPR006043 Xanthine/uracil/vitamin C permease CYD28_RS12335 IPR006042 Xanthine/uracil permease CYD28_RS12340 IPR001093 IMP dehydrogenase/GMP reductase CYD28_RS12340 IPR000644 CBS domain CYD28_RS12340 IPR013785 Aldolase-type TIM barrel CYD28_RS12340 IPR005990 Inosine-5'-monophosphate dehydrogenase CYD28_RS12340 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CYD28_RS12345 IPR017926 Glutamine amidotransferase CYD28_RS12345 IPR004739 GMP synthase, glutamine amidotransferase CYD28_RS12345 IPR025777 GMP synthetase ATP pyrophosphatase domain CYD28_RS12345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CYD28_RS12345 IPR022955 GMP synthase CYD28_RS12345 IPR001674 GMP synthase, C-terminal CYD28_RS12345 IPR029062 Class I glutamine amidotransferase-like CYD28_RS12350 IPR004107 Integrase, SAM-like, N-terminal CYD28_RS12350 IPR011010 DNA breaking-rejoining enzyme, catalytic core CYD28_RS12350 IPR010998 Integrase/recombinase, N-terminal CYD28_RS12350 IPR013762 Integrase-like, catalytic domain superfamily CYD28_RS12350 IPR002104 Integrase, catalytic domain CYD28_RS12370 IPR001584 Integrase, catalytic core CYD28_RS12370 IPR012337 Ribonuclease H-like superfamily CYD28_RS12370 IPR036397 Ribonuclease H superfamily CYD28_RS12370 IPR032874 DDE domain CYD28_RS12395 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain CYD28_RS12395 IPR012337 Ribonuclease H-like superfamily CYD28_RS12395 IPR001584 Integrase, catalytic core CYD28_RS12420 IPR018275 Ribosomal protein S18, conserved site CYD28_RS12420 IPR001648 Ribosomal protein S18 CYD28_RS12420 IPR036870 Ribosomal protein S18 superfamily CYD28_RS12425 IPR012340 Nucleic acid-binding, OB-fold CYD28_RS12425 IPR000424 Primosome PriB/single-strand DNA-binding CYD28_RS12425 IPR011344 Single-stranded DNA-binding protein CYD28_RS12430 IPR000529 Ribosomal protein S6 CYD28_RS12430 IPR020814 Ribosomal protein S6, plastid/chloroplast CYD28_RS12430 IPR035980 Ribosomal protein S6 superfamily CYD28_RS12430 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CYD28_RS12445 IPR004095 TGS CYD28_RS12445 IPR012676 TGS-like CYD28_RS12445 IPR023192 TGS-like domain superfamily CYD28_RS12445 IPR013029 YchF, C-terminal domain CYD28_RS12445 IPR041706 YchF, N-terminal CYD28_RS12445 IPR006073 GTP binding domain CYD28_RS12445 IPR012675 Beta-grasp domain superfamily CYD28_RS12445 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CYD28_RS12445 IPR031167 OBG-type guanine nucleotide-binding (G) domain CYD28_RS12445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS12450 IPR009296 Protein of unknown function DUF951 CYD28_RS12455 IPR006685 Mechanosensitive ion channel MscS CYD28_RS12455 IPR010920 LSM domain superfamily CYD28_RS12455 IPR011066 Mechanosensitive ion channel MscS, C-terminal CYD28_RS12455 IPR023408 Mechanosensitive ion channel MscS domain superfamily CYD28_RS12455 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CYD28_RS12460 IPR004437 ParB/RepB/Spo0J partition protein CYD28_RS12460 IPR003115 ParB/Sulfiredoxin CYD28_RS12460 IPR036086 ParB/Sulfiredoxin superfamily CYD28_RS12460 IPR041468 ParB/Spo0J, HTH domain CYD28_RS12465 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS12465 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS12465 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CYD28_RS12465 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS12470 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CYD28_RS12470 IPR015421 Pyridoxal phosphate-dependent transferase, major domain CYD28_RS12470 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 CYD28_RS12470 IPR015424 Pyridoxal phosphate-dependent transferase CYD28_RS12475 IPR036589 Homocysteine-binding domain superfamily CYD28_RS12475 IPR003726 Homocysteine-binding domain CYD28_RS12475 IPR003171 Methylenetetrahydrofolate reductase CYD28_RS12475 IPR029041 FAD-linked oxidoreductase-like CYD28_RS12480 IPR006276 Cobalamin-independent methionine synthase CYD28_RS12480 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal CYD28_RS12480 IPR038071 UROD/MetE-like superfamily CYD28_RS12480 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal CYD28_RS12495 IPR003439 ABC transporter-like CYD28_RS12495 IPR017871 ABC transporter, conserved site CYD28_RS12495 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily CYD28_RS12495 IPR032524 ABC transporter Uup, C-terminal CYD28_RS12495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS12495 IPR003593 AAA+ ATPase domain CYD28_RS12495 IPR032781 ABC-transporter extension domain CYD28_RS12505 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CYD28_RS12505 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CYD28_RS12505 IPR037523 Vicinal oxygen chelate (VOC) domain CYD28_RS12510 IPR000182 GNAT domain CYD28_RS12510 IPR016181 Acyl-CoA N-acyltransferase CYD28_RS12515 IPR023599 Membrane-associated protein TcaA CYD28_RS12525 IPR019756 Peptidase S26A, signal peptidase I, serine active site CYD28_RS12525 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CYD28_RS12525 IPR000223 Peptidase S26A, signal peptidase I CYD28_RS12525 IPR036286 LexA/Signal peptidase-like superfamily CYD28_RS12525 IPR019758 Peptidase S26A, signal peptidase I, conserved site CYD28_RS12525 IPR019533 Peptidase S26 CYD28_RS12535 IPR003593 AAA+ ATPase domain CYD28_RS12535 IPR003439 ABC transporter-like CYD28_RS12535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS12540 IPR003838 ABC transporter permease protein domain CYD28_RS12540 IPR027022 ABC transporter permease protein, BceB-type CYD28_RS12550 IPR041171 SDR-like Ig domain CYD28_RS12550 IPR008966 Adhesion domain superfamily CYD28_RS12550 IPR005877 YSIRK Gram-positive signal peptide CYD28_RS12550 IPR011252 Fibrogen-binding domain 1 CYD28_RS12550 IPR019948 Gram-positive LPXTG cell wall anchor CYD28_RS12550 IPR011266 Fibrinogen-binding domain 2 CYD28_RS12550 IPR019931 LPXTG cell wall anchor domain CYD28_RS12550 IPR013783 Immunoglobulin-like fold CYD28_RS12550 IPR033764 SD-repeat containing protein, B domain CYD28_RS12575 IPR036086 ParB/Sulfiredoxin superfamily CYD28_RS12575 IPR003115 ParB/Sulfiredoxin CYD28_RS12575 IPR004437 ParB/RepB/Spo0J partition protein CYD28_RS12575 IPR023705 Nucleoid occlusion protein CYD28_RS12575 IPR041468 ParB/Spo0J, HTH domain CYD28_RS12580 IPR003682 rRNA small subunit methyltransferase G CYD28_RS12580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CYD28_RS12585 IPR020595 MnmG-related, conserved site CYD28_RS12585 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG CYD28_RS12585 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related CYD28_RS12585 IPR026904 GidA associated domain 3 CYD28_RS12585 IPR036188 FAD/NAD(P)-binding domain superfamily CYD28_RS12590 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CYD28_RS12590 IPR005225 Small GTP-binding protein domain CYD28_RS12590 IPR031168 TrmE-type guanine nucleotide-binding domain CYD28_RS12590 IPR004520 tRNA modification GTPase MnmE CYD28_RS12590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS12590 IPR025867 MnmE, helical domain CYD28_RS12590 IPR006073 GTP binding domain CYD28_RS12590 IPR018948 GTP-binding protein TrmE, N-terminal CYD28_RS12590 IPR027368 tRNA modification GTPase MnmE domain 2 CYD28_RS12595 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CYD28_RS12595 IPR000100 Ribonuclease P CYD28_RS12595 IPR020539 Ribonuclease P, conserved site CYD28_RS12595 IPR020568 Ribosomal protein S5 domain 2-type fold CYD28_RS12600 IPR020939 Ribosomal protein L34, conserved site CYD28_RS12600 IPR000271 Ribosomal protein L34 CYD28_RS12655 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily CYD28_RS12655 IPR001647 DNA-binding HTH domain, TetR-type CYD28_RS12655 IPR039538 BetI-type transcriptional repressor, C-terminal CYD28_RS12655 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CYD28_RS12655 IPR009057 Homeobox-like domain superfamily CYD28_RS12660 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CYD28_RS12660 IPR006118 Recombinase, conserved site CYD28_RS12660 IPR006119 Resolvase, N-terminal catalytic domain CYD28_RS12660 IPR006120 Resolvase, HTH domain CYD28_RS12660 IPR009057 Homeobox-like domain superfamily CYD28_RS12665 IPR009004 Transposase, Mu, C-terminal CYD28_RS12665 IPR036397 Ribonuclease H superfamily CYD28_RS12665 IPR015378 Transposase-like, Mu, C-terminal CYD28_RS12665 IPR001584 Integrase, catalytic core CYD28_RS12665 IPR012337 Ribonuclease H-like superfamily CYD28_RS12665 IPR038965 Transposase InsF-like CYD28_RS12665 IPR009057 Homeobox-like domain superfamily CYD28_RS12670 IPR003593 AAA+ ATPase domain CYD28_RS12670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CYD28_RS12675 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily CYD28_RS12675 IPR006118 Recombinase, conserved site CYD28_RS12675 IPR006120 Resolvase, HTH domain CYD28_RS12675 IPR006119 Resolvase, N-terminal catalytic domain CYD28_RS12690 IPR010982 Lambda repressor-like, DNA-binding domain superfamily CYD28_RS12690 IPR013430 Toxin-antitoxin system, antidote protein, HigA CYD28_RS12690 IPR001387 Cro/C1-type helix-turn-helix domain CYD28_RS12725 IPR012318 Crp-type HTH domain CYD28_RS12725 IPR008813 Plasmid replication protein, RepL CYD28_RS12725 IPR036388 Winged helix-like DNA-binding domain superfamily CYD28_RS12725 IPR036390 Winged helix DNA-binding domain superfamily