locus-tag class description ShL2_RS00005 PF11638 DnaA N-terminal domain ShL2_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix ShL2_RS00005 PF00308 Bacterial dnaA protein ShL2_RS00010 PF02767 DNA polymerase III beta subunit, central domain ShL2_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain ShL2_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain ShL2_RS00020 PF02463 RecF/RecN/SMC N terminal domain ShL2_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS00025 PF00204 DNA gyrase B ShL2_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus ShL2_RS00025 PF01751 Toprim domain ShL2_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A ShL2_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller ShL2_RS00035 PF01256 Carbohydrate kinase ShL2_RS00040 PF02403 Seryl-tRNA synthetase N-terminal domain ShL2_RS00040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ShL2_RS00045 PF03591 AzlC protein ShL2_RS00055 PF00561 alpha/beta hydrolase fold ShL2_RS00065 PF02272 DHHA1 domain ShL2_RS00065 PF01368 DHH family ShL2_RS00070 PF01281 Ribosomal protein L9, N-terminal domain ShL2_RS00070 PF03948 Ribosomal protein L9, C-terminal domain ShL2_RS00075 PF00772 DnaB-like helicase N terminal domain ShL2_RS00075 PF03796 DnaB-like helicase C terminal domain ShL2_RS00080 PF00709 Adenylosuccinate synthetase ShL2_RS00100 PF00486 Transcriptional regulatory protein, C terminal ShL2_RS00100 PF00072 Response regulator receiver domain ShL2_RS00105 PF00672 HAMP domain ShL2_RS00105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS00105 PF00512 His Kinase A (phospho-acceptor) domain ShL2_RS00105 PF00989 PAS fold ShL2_RS00110 PF07435 YycH protein ShL2_RS00120 PF00753 Metallo-beta-lactamase superfamily ShL2_RS00125 PF02590 Predicted SPOUT methyltransferase ShL2_RS00135 PF01022 Bacterial regulatory protein, arsR family ShL2_RS00140 PF01451 Low molecular weight phosphotyrosine protein phosphatase ShL2_RS00155 PF13610 DDE domain ShL2_RS00160 PF00905 Penicillin binding protein transpeptidase domain ShL2_RS00160 PF03717 Penicillin-binding Protein dimerisation domain ShL2_RS00160 PF05223 NTF2-like N-terminal transpeptidase domain ShL2_RS00165 PF01575 MaoC like domain ShL2_RS00170 PF03009 Glycerophosphoryl diester phosphodiesterase family ShL2_RS00180 PF13610 DDE domain ShL2_RS00190 PF07563 Protein of unknown function (DUF1541) ShL2_RS00215 PF13411 MerR HTH family regulatory protein ShL2_RS00225 PF13460 NAD(P)H-binding ShL2_RS00230 PF16884 N-terminal domain of oxidoreductase ShL2_RS00230 PF00107 Zinc-binding dehydrogenase ShL2_RS00245 PF01022 Bacterial regulatory protein, arsR family ShL2_RS00250 PF01451 Low molecular weight phosphotyrosine protein phosphatase ShL2_RS00255 PF02040 Arsenical pump membrane protein ShL2_RS00265 PF00924 Mechanosensitive ion channel ShL2_RS00280 PF02492 CobW/HypB/UreG, nucleotide-binding domain ShL2_RS00280 PF07683 Cobalamin synthesis protein cobW C-terminal domain ShL2_RS00285 PF01297 Zinc-uptake complex component A periplasmic ShL2_RS00305 PF01546 Peptidase family M20/M25/M40 ShL2_RS00305 PF07687 Peptidase dimerisation domain ShL2_RS00315 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ShL2_RS00315 PF03129 Anticodon binding domain ShL2_RS00315 PF02824 TGS domain ShL2_RS00315 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ShL2_RS00320 PF00005 ABC transporter ShL2_RS00340 PF01757 Acyltransferase family ShL2_RS00345 PF00535 Glycosyl transferase family 2 ShL2_RS00345 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 ShL2_RS00350 PF01297 Zinc-uptake complex component A periplasmic ShL2_RS00355 PF00950 ABC 3 transport family ShL2_RS00360 PF00005 ABC transporter ShL2_RS00365 PF02492 CobW/HypB/UreG, nucleotide-binding domain ShL2_RS00365 PF07683 Cobalamin synthesis protein cobW C-terminal domain ShL2_RS00370 PF05525 Branched-chain amino acid transport protein ShL2_RS00380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ShL2_RS00385 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS00390 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS00395 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ShL2_RS00395 PF00005 ABC transporter ShL2_RS00400 PF00005 ABC transporter ShL2_RS00420 PF07690 Major Facilitator Superfamily ShL2_RS00425 PF13411 MerR HTH family regulatory protein ShL2_RS00435 PF03471 Transporter associated domain ShL2_RS00435 PF01595 Cyclin M transmembrane N-terminal domain ShL2_RS00435 PF00571 CBS domain ShL2_RS00440 PF02082 Transcriptional regulator ShL2_RS00445 PF13460 NAD(P)H-binding ShL2_RS00460 PF00005 ABC transporter ShL2_RS00465 PF00324 Amino acid permease ShL2_RS00470 PF00881 Nitroreductase family ShL2_RS00490 PF04650 YSIRK type signal peptide ShL2_RS00515 PF00356 Bacterial regulatory proteins, lacI family ShL2_RS00520 PF00294 pfkB family carbohydrate kinase ShL2_RS00525 PF05025 RbsD / FucU transport protein family ShL2_RS00530 PF00005 ABC transporter ShL2_RS00535 PF02653 Branched-chain amino acid transport system / permease component ShL2_RS00540 PF13407 Periplasmic binding protein domain ShL2_RS00545 PF02558 Ketopantoate reductase PanE/ApbA ShL2_RS00545 PF08546 Ketopantoate reductase PanE/ApbA C terminal ShL2_RS00550 PF02548 Ketopantoate hydroxymethyltransferase ShL2_RS00555 PF02569 Pantoate-beta-alanine ligase ShL2_RS00560 PF02261 Aspartate decarboxylase ShL2_RS00570 PF02557 D-alanyl-D-alanine carboxypeptidase ShL2_RS00575 PF01418 Helix-turn-helix domain, rpiR family ShL2_RS00575 PF01380 SIS domain ShL2_RS00580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ShL2_RS00585 PF02378 Phosphotransferase system, EIIC ShL2_RS00590 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ShL2_RS00605 PF01869 BadF/BadG/BcrA/BcrD ATPase family ShL2_RS00615 PF05656 Protein of unknown function (DUF805) ShL2_RS00625 PF00488 MutS domain V ShL2_RS00625 PF05190 MutS family domain IV ShL2_RS00625 PF05192 MutS domain III ShL2_RS00625 PF05188 MutS domain II ShL2_RS00625 PF01624 MutS domain I ShL2_RS00630 PF11208 Protein of unknown function (DUF2992) ShL2_RS00635 PF02040 Arsenical pump membrane protein ShL2_RS00640 PF02525 Flavodoxin-like fold ShL2_RS00645 PF03606 C4-dicarboxylate anaerobic carrier ShL2_RS00660 PF12867 DinB superfamily ShL2_RS00680 PF07690 Major Facilitator Superfamily ShL2_RS00700 PF00890 FAD binding domain ShL2_RS00705 PF00171 Aldehyde dehydrogenase family ShL2_RS00710 PF00107 Zinc-binding dehydrogenase ShL2_RS00710 PF08240 Alcohol dehydrogenase GroES-like domain ShL2_RS00715 PF01047 MarR family ShL2_RS00720 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS00720 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ShL2_RS00735 PF00155 Aminotransferase class I and II ShL2_RS00745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ShL2_RS00745 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS00750 PF00676 Dehydrogenase E1 component ShL2_RS00755 PF02780 Transketolase, C-terminal domain ShL2_RS00755 PF02779 Transketolase, pyrimidine binding domain ShL2_RS00760 PF00364 Biotin-requiring enzyme ShL2_RS00760 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ShL2_RS00760 PF02817 e3 binding domain ShL2_RS00770 PF03551 Transcriptional regulator PadR-like family ShL2_RS00785 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) ShL2_RS00790 PF00892 EamA-like transporter family ShL2_RS00835 PF07501 G5 domain ShL2_RS00835 PF17041 E domain ShL2_RS00835 PF04650 YSIRK type signal peptide ShL2_RS00835 PF00746 LPXTG cell wall anchor motif ShL2_RS00845 PF13610 DDE domain ShL2_RS00855 PF13411 MerR HTH family regulatory protein ShL2_RS00860 PF02525 Flavodoxin-like fold ShL2_RS00895 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ShL2_RS00895 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ShL2_RS00900 PF00696 Amino acid kinase family ShL2_RS00910 PF01381 Helix-turn-helix ShL2_RS00920 PF10437 Bacterial lipoate protein ligase C-terminus ShL2_RS00920 PF03099 Biotin/lipoate A/B protein ligase family ShL2_RS00930 PF01661 Macro domain ShL2_RS00935 PF01597 Glycine cleavage H-protein ShL2_RS00940 PF00296 Luciferase-like monooxygenase ShL2_RS00945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ShL2_RS00950 PF04055 Radical SAM superfamily ShL2_RS00950 PF06968 Biotin and Thiamin Synthesis associated domain ShL2_RS00960 PF00939 Sodium:sulfate symporter transmembrane region ShL2_RS00965 PF05684 Protein of unknown function (DUF819) ShL2_RS00970 PF07286 Protein of unknown function (DUF1445) ShL2_RS00975 PF02028 BCCT, betaine/carnitine/choline family transporter ShL2_RS00980 PF01979 Amidohydrolase family ShL2_RS00990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ShL2_RS00995 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ShL2_RS01000 PF01380 SIS domain ShL2_RS01000 PF01418 Helix-turn-helix domain, rpiR family ShL2_RS01005 PF00480 ROK family ShL2_RS01010 PF00701 Dihydrodipicolinate synthetase family ShL2_RS01015 PF00474 Sodium:solute symporter family ShL2_RS01035 PF02517 CPBP intramembrane metalloprotease ShL2_RS01040 PF00005 ABC transporter ShL2_RS01045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ShL2_RS01045 PF00005 ABC transporter ShL2_RS01050 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS01055 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS01060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ShL2_RS01065 PF01470 Pyroglutamyl peptidase ShL2_RS01080 PF07690 Major Facilitator Superfamily ShL2_RS01085 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ShL2_RS01095 PF17773 UPF0176 acylphosphatase like domain ShL2_RS01095 PF00581 Rhodanese-like domain ShL2_RS01095 PF12368 Rhodanase C-terminal ShL2_RS01100 PF08450 SMP-30/Gluconolactonase/LRE-like region ShL2_RS01105 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ShL2_RS01105 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ShL2_RS01105 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ShL2_RS01105 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ShL2_RS01125 PF06100 MCRA family ShL2_RS01130 PF17760 UvrA interaction domain ShL2_RS01130 PF17755 UvrA DNA-binding domain ShL2_RS01145 PF00005 ABC transporter ShL2_RS01155 PF01381 Helix-turn-helix ShL2_RS01160 PF02082 Transcriptional regulator ShL2_RS01165 PF00892 EamA-like transporter family ShL2_RS01170 PF07690 Major Facilitator Superfamily ShL2_RS01180 PF00149 Calcineurin-like phosphoesterase ShL2_RS01180 PF02872 5'-nucleotidase, C-terminal domain ShL2_RS01190 PF00005 ABC transporter ShL2_RS01195 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS01200 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS01220 PF00746 LPXTG cell wall anchor motif ShL2_RS01240 PF00344 SecY translocase ShL2_RS01250 PF16929 Accessory Sec system GspB-transporter ShL2_RS01255 PF01043 SecA preprotein cross-linking domain ShL2_RS01255 PF07516 SecA Wing and Scaffold domain ShL2_RS01255 PF07517 SecA DEAD-like domain ShL2_RS01260 PF00534 Glycosyl transferases group 1 ShL2_RS01270 PF00672 HAMP domain ShL2_RS01270 PF00512 His Kinase A (phospho-acceptor) domain ShL2_RS01275 PF00486 Transcriptional regulatory protein, C terminal ShL2_RS01275 PF00072 Response regulator receiver domain ShL2_RS01295 PF01625 Peptide methionine sulfoxide reductase ShL2_RS01315 PF07690 Major Facilitator Superfamily ShL2_RS01325 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ShL2_RS01330 PF03176 MMPL family ShL2_RS01335 PF03466 LysR substrate binding domain ShL2_RS01335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ShL2_RS01340 PF00149 Calcineurin-like phosphoesterase ShL2_RS01345 PF01468 GA module ShL2_RS01350 PF03606 C4-dicarboxylate anaerobic carrier ShL2_RS01355 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ShL2_RS01355 PF02378 Phosphotransferase system, EIIC ShL2_RS01355 PF00367 phosphotransferase system, EIIB ShL2_RS01360 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ShL2_RS01360 PF05257 CHAP domain ShL2_RS01360 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ShL2_RS01360 PF05257 CHAP domain ShL2_RS01365 PF01061 ABC-2 type transporter ShL2_RS01390 PF01316 Arginine repressor, DNA binding domain ShL2_RS01390 PF02863 Arginine repressor, C-terminal domain ShL2_RS01400 PF13520 Amino acid permease ShL2_RS01405 PF00027 Cyclic nucleotide-binding domain ShL2_RS01415 PF00356 Bacterial regulatory proteins, lacI family ShL2_RS01430 PF13630 SdpI/YhfL protein family ShL2_RS01440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ShL2_RS01440 PF00205 Thiamine pyrophosphate enzyme, central domain ShL2_RS01440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ShL2_RS01450 PF02525 Flavodoxin-like fold ShL2_RS01455 PF02706 Chain length determinant protein ShL2_RS01460 PF13614 AAA domain ShL2_RS01470 PF02719 Polysaccharide biosynthesis protein ShL2_RS01475 PF08485 Polysaccharide biosynthesis protein C-terminal ShL2_RS01475 PF02719 Polysaccharide biosynthesis protein ShL2_RS01480 PF01370 NAD dependent epimerase/dehydratase family ShL2_RS01485 PF02350 UDP-N-acetylglucosamine 2-epimerase ShL2_RS01510 PF02397 Bacterial sugar transferase ShL2_RS01515 PF01370 NAD dependent epimerase/dehydratase family ShL2_RS01520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ShL2_RS01520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ShL2_RS01520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ShL2_RS01525 PF02350 UDP-N-acetylglucosamine 2-epimerase ShL2_RS01530 PF03816 Cell envelope-related transcriptional attenuator domain ShL2_RS01535 PF00245 Alkaline phosphatase ShL2_RS01540 PF00072 Response regulator receiver domain ShL2_RS01540 PF00486 Transcriptional regulatory protein, C terminal ShL2_RS01545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS01550 PF00005 ABC transporter ShL2_RS01585 PF00175 Oxidoreductase NAD-binding domain ShL2_RS01585 PF00258 Flavodoxin ShL2_RS01585 PF00667 FAD binding domain ShL2_RS01595 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ShL2_RS01600 PF14824 Sirohaem biosynthesis protein central ShL2_RS01605 PF01925 Sulfite exporter TauE/SafE ShL2_RS01610 PF01747 ATP-sulfurylase ShL2_RS01610 PF14306 PUA-like domain ShL2_RS01620 PF03600 Citrate transporter ShL2_RS01635 PF03605 Anaerobic c4-dicarboxylate membrane transporter ShL2_RS01640 PF02028 BCCT, betaine/carnitine/choline family transporter ShL2_RS01650 PF00171 Aldehyde dehydrogenase family ShL2_RS01655 PF05199 GMC oxidoreductase ShL2_RS01655 PF00732 GMC oxidoreductase ShL2_RS01660 PF12833 Helix-turn-helix domain ShL2_RS01665 PF01546 Peptidase family M20/M25/M40 ShL2_RS01665 PF07687 Peptidase dimerisation domain ShL2_RS01670 PF07690 Major Facilitator Superfamily ShL2_RS01675 PF01546 Peptidase family M20/M25/M40 ShL2_RS01675 PF07687 Peptidase dimerisation domain ShL2_RS01690 PF00501 AMP-binding enzyme ShL2_RS01690 PF13193 AMP-binding enzyme C-terminal domain ShL2_RS01700 PF03466 LysR substrate binding domain ShL2_RS01700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ShL2_RS01710 PF02896 PEP-utilising enzyme, TIM barrel domain ShL2_RS01710 PF00391 PEP-utilising enzyme, mobile domain ShL2_RS01710 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ShL2_RS01715 PF03618 Kinase/pyrophosphorylase ShL2_RS01720 PF06039 Malate:quinone oxidoreductase (Mqo) ShL2_RS01730 PF00232 Glycosyl hydrolase family 1 ShL2_RS01750 PF00274 Fructose-bisphosphate aldolase class-I ShL2_RS01780 PF03180 NLPA lipoprotein ShL2_RS01785 PF00202 Aminotransferase class-III ShL2_RS01790 PF13520 Amino acid permease ShL2_RS01795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ShL2_RS01795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ShL2_RS01795 PF00205 Thiamine pyrophosphate enzyme, central domain ShL2_RS01800 PF03306 Alpha-acetolactate decarboxylase ShL2_RS01835 PF02677 Epoxyqueuosine reductase QueH ShL2_RS01845 PF01180 Dihydroorotate dehydrogenase ShL2_RS01850 PF03881 Fructosamine kinase ShL2_RS01865 PF00561 alpha/beta hydrolase fold ShL2_RS01880 PF05979 Bacterial protein of unknown function (DUF896) ShL2_RS01885 PF00296 Luciferase-like monooxygenase ShL2_RS01895 PF01551 Peptidase family M23 ShL2_RS01905 PF03976 Polyphosphate kinase 2 (PPK2) ShL2_RS01920 PF01593 Flavin containing amine oxidoreductase ShL2_RS01925 PF00535 Glycosyl transferase family 2 ShL2_RS01935 PF01593 Flavin containing amine oxidoreductase ShL2_RS01940 PF00155 Aminotransferase class I and II ShL2_RS01945 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ShL2_RS01945 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ShL2_RS01950 PF00403 Heavy-metal-associated domain ShL2_RS01955 PF00403 Heavy-metal-associated domain ShL2_RS01970 PF12464 Maltose acetyltransferase ShL2_RS01970 PF14602 Hexapeptide repeat of succinyl-transferase ShL2_RS01975 PF00171 Aldehyde dehydrogenase family ShL2_RS01995 PF01544 CorA-like Mg2+ transporter protein ShL2_RS02005 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ShL2_RS02005 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ShL2_RS02010 PF08540 Hydroxymethylglutaryl-coenzyme A synthase C terminal ShL2_RS02010 PF01154 Hydroxymethylglutaryl-coenzyme A synthase N terminal ShL2_RS02015 PF00108 Thiolase, N-terminal domain ShL2_RS02015 PF02803 Thiolase, C-terminal domain ShL2_RS02020 PF00368 Hydroxymethylglutaryl-coenzyme A reductase ShL2_RS02025 PF01476 LysM domain ShL2_RS02025 PF05257 CHAP domain ShL2_RS02035 PF03466 LysR substrate binding domain ShL2_RS02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ShL2_RS02040 PF03788 LrgA family ShL2_RS02045 PF04172 LrgB-like family ShL2_RS02050 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ShL2_RS02050 PF00205 Thiamine pyrophosphate enzyme, central domain ShL2_RS02050 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ShL2_RS02055 PF01610 Transposase ShL2_RS02055 PF13683 Integrase core domain ShL2_RS02060 PF02378 Phosphotransferase system, EIIC ShL2_RS02060 PF00367 phosphotransferase system, EIIB ShL2_RS02060 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ShL2_RS02080 PF00056 lactate/malate dehydrogenase, NAD binding domain ShL2_RS02080 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ShL2_RS02085 PF07859 alpha/beta hydrolase fold ShL2_RS02090 PF00892 EamA-like transporter family ShL2_RS02100 PF02311 AraC-like ligand binding domain ShL2_RS02100 PF12833 Helix-turn-helix domain ShL2_RS02110 PF08245 Mur ligase middle domain ShL2_RS02115 PF14102 Capsule biosynthesis CapC ShL2_RS02130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ShL2_RS02130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ShL2_RS02140 PF01842 ACT domain ShL2_RS02140 PF03315 Serine dehydratase beta chain ShL2_RS02145 PF03313 Serine dehydratase alpha chain ShL2_RS02160 PF04203 Sortase domain ShL2_RS02170 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ShL2_RS02170 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ShL2_RS02190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ShL2_RS02205 PF00171 Aldehyde dehydrogenase family ShL2_RS02210 PF01047 MarR family ShL2_RS02215 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ShL2_RS02220 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ShL2_RS02225 PF01738 Dienelactone hydrolase family ShL2_RS02240 PF06874 Firmicute fructose-1,6-bisphosphatase ShL2_RS02245 PF09335 SNARE associated Golgi protein ShL2_RS02250 PF00899 ThiF family ShL2_RS02255 PF05690 Thiazole biosynthesis protein ThiG ShL2_RS02260 PF02597 ThiS family ShL2_RS02260 PF05690 Thiazole biosynthesis protein ThiG ShL2_RS02265 PF01266 FAD dependent oxidoreductase ShL2_RS02275 PF07690 Major Facilitator Superfamily ShL2_RS02290 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) ShL2_RS02295 PF04607 Region found in RelA / SpoT proteins ShL2_RS02310 PF07729 FCD domain ShL2_RS02310 PF00392 Bacterial regulatory proteins, gntR family ShL2_RS02315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ShL2_RS02315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ShL2_RS02320 PF02447 GntP family permease ShL2_RS02330 PF00483 Nucleotidyl transferase ShL2_RS02375 PF00106 short chain dehydrogenase ShL2_RS02380 PF01546 Peptidase family M20/M25/M40 ShL2_RS02380 PF07687 Peptidase dimerisation domain ShL2_RS02385 PF13090 Polyphosphate kinase C-terminal domain 2 ShL2_RS02385 PF17941 Polyphosphate kinase C-terminal domain 1 ShL2_RS02385 PF13089 Polyphosphate kinase N-terminal domain ShL2_RS02385 PF02503 Polyphosphate kinase middle domain ShL2_RS02390 PF02541 Ppx/GppA phosphatase family ShL2_RS02395 PF03806 AbgT putative transporter family ShL2_RS02405 PF05343 M42 glutamyl aminopeptidase ShL2_RS02415 PF01053 Cys/Met metabolism PLP-dependent enzyme ShL2_RS02420 PF01645 Conserved region in glutamate synthase ShL2_RS02435 PF00005 ABC transporter ShL2_RS02440 PF03649 Uncharacterised protein family (UPF0014) ShL2_RS02445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS02445 PF00512 His Kinase A (phospho-acceptor) domain ShL2_RS02450 PF00072 Response regulator receiver domain ShL2_RS02450 PF00486 Transcriptional regulatory protein, C terminal ShL2_RS02460 PF07690 Major Facilitator Superfamily ShL2_RS02465 PF00135 Carboxylesterase family ShL2_RS02470 PF13520 Amino acid permease ShL2_RS02475 PF08818 Domain of unknown function (DU1801) ShL2_RS02480 PF00107 Zinc-binding dehydrogenase ShL2_RS02480 PF08240 Alcohol dehydrogenase GroES-like domain ShL2_RS02485 PF00005 ABC transporter ShL2_RS02485 PF00571 CBS domain ShL2_RS02490 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS02495 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ShL2_RS02500 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS02505 PF04172 LrgB-like family ShL2_RS02510 PF03788 LrgA family ShL2_RS02515 PF00072 Response regulator receiver domain ShL2_RS02515 PF04397 LytTr DNA-binding domain ShL2_RS02525 PF07690 Major Facilitator Superfamily ShL2_RS02530 PF08546 Ketopantoate reductase PanE/ApbA C terminal ShL2_RS02530 PF02558 Ketopantoate reductase PanE/ApbA ShL2_RS02540 PF07274 Protein of unknown function (DUF1440) ShL2_RS02550 PF02096 60Kd inner membrane protein ShL2_RS02555 PF00144 Beta-lactamase ShL2_RS02560 PF13520 Amino acid permease ShL2_RS02570 PF00324 Amino acid permease ShL2_RS02590 PF13649 Methyltransferase domain ShL2_RS02595 PF01814 Hemerythrin HHE cation binding domain ShL2_RS02595 PF04405 Domain of Unknown function (DUF542) ShL2_RS02600 PF07690 Major Facilitator Superfamily ShL2_RS02610 PF02595 Glycerate kinase family ShL2_RS02625 PF16916 Dimerisation domain of Zinc Transporter ShL2_RS02625 PF01545 Cation efflux family ShL2_RS02635 PF00300 Histidine phosphatase superfamily (branch 1) ShL2_RS02640 PF07690 Major Facilitator Superfamily ShL2_RS02650 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS02655 PF00005 ABC transporter ShL2_RS02660 PF02388 FemAB family ShL2_RS02680 PF04264 YceI-like domain ShL2_RS02705 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS02705 PF04324 BFD-like [2Fe-2S] binding domain ShL2_RS02705 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ShL2_RS02705 PF18267 Rubredoxin NAD+ reductase C-terminal domain ShL2_RS02705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ShL2_RS02710 PF00355 Rieske [2Fe-2S] domain ShL2_RS02715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ShL2_RS02720 PF00384 Molybdopterin oxidoreductase ShL2_RS02720 PF01568 Molydopterin dinucleotide binding domain ShL2_RS02720 PF14710 Respiratory nitrate reductase alpha N-terminal ShL2_RS02725 PF13247 4Fe-4S dicluster domain ShL2_RS02725 PF14711 Respiratory nitrate reductase beta C-terminal ShL2_RS02730 PF02613 Nitrate reductase delta subunit ShL2_RS02735 PF02665 Nitrate reductase gamma subunit ShL2_RS02745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS02745 PF07730 Histidine kinase ShL2_RS02750 PF00196 Bacterial regulatory proteins, luxR family ShL2_RS02750 PF00072 Response regulator receiver domain ShL2_RS02755 PF07690 Major Facilitator Superfamily ShL2_RS02760 PF00011 Hsp20/alpha crystallin family ShL2_RS02765 PF01047 MarR family ShL2_RS02775 PF00375 Sodium:dicarboxylate symporter family ShL2_RS02790 PF16242 Pyridoxamine 5'-phosphate oxidase like ShL2_RS02795 PF12833 Helix-turn-helix domain ShL2_RS02805 PF00367 phosphotransferase system, EIIB ShL2_RS02805 PF02378 Phosphotransferase system, EIIC ShL2_RS02830 PF01554 MatE ShL2_RS02850 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS02855 PF00583 Acetyltransferase (GNAT) family ShL2_RS02860 PF00107 Zinc-binding dehydrogenase ShL2_RS02860 PF08240 Alcohol dehydrogenase GroES-like domain ShL2_RS02865 PF09375 Imelysin ShL2_RS02870 PF04261 Dyp-type peroxidase family ShL2_RS02870 PF10518 TAT (twin-arginine translocation) pathway signal sequence ShL2_RS02875 PF03239 Iron permease FTR1 family ShL2_RS02880 PF00902 Sec-independent protein translocase protein (TatC) ShL2_RS02885 PF02416 mttA/Hcf106 family ShL2_RS02890 PF13673 Acetyltransferase (GNAT) domain ShL2_RS02905 PF00534 Glycosyl transferases group 1 ShL2_RS02905 PF17101 Stealth protein CR1, conserved region 1 ShL2_RS02905 PF11380 Stealth protein CR2, conserved region 2 ShL2_RS02905 PF17102 Stealth protein CR3, conserved region 3 ShL2_RS02905 PF17103 Stealth protein CR4, conserved region 4 ShL2_RS02910 PF06039 Malate:quinone oxidoreductase (Mqo) ShL2_RS02920 PF04397 LytTr DNA-binding domain ShL2_RS02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS02925 PF00512 His Kinase A (phospho-acceptor) domain ShL2_RS02925 PF00672 HAMP domain ShL2_RS02930 PF00486 Transcriptional regulatory protein, C terminal ShL2_RS02930 PF00072 Response regulator receiver domain ShL2_RS02940 PF00005 ABC transporter ShL2_RS02950 PF12802 MarR family ShL2_RS02960 PF07690 Major Facilitator Superfamily ShL2_RS03000 PF01544 CorA-like Mg2+ transporter protein ShL2_RS03005 PF01070 FMN-dependent dehydrogenase ShL2_RS03010 PF03616 Sodium/glutamate symporter ShL2_RS03015 PF02245 Methylpurine-DNA glycosylase (MPG) ShL2_RS03020 PF01381 Helix-turn-helix ShL2_RS03030 PF02694 Uncharacterised BCR, YnfA/UPF0060 family ShL2_RS03035 PF01263 Aldose 1-epimerase ShL2_RS03040 PF03475 3-alpha domain ShL2_RS03040 PF03473 MOSC domain ShL2_RS03045 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ShL2_RS03050 PF01610 Transposase ShL2_RS03050 PF13683 Integrase core domain ShL2_RS03055 PF02517 CPBP intramembrane metalloprotease ShL2_RS03060 PF00491 Arginase family ShL2_RS03070 PF07687 Peptidase dimerisation domain ShL2_RS03070 PF01546 Peptidase family M20/M25/M40 ShL2_RS03080 PF01613 Flavin reductase like domain ShL2_RS03095 PF01418 Helix-turn-helix domain, rpiR family ShL2_RS03095 PF01380 SIS domain ShL2_RS03100 PF00367 phosphotransferase system, EIIB ShL2_RS03100 PF02378 Phosphotransferase system, EIIC ShL2_RS03110 PF13419 Haloacid dehalogenase-like hydrolase ShL2_RS03130 PF00324 Amino acid permease ShL2_RS03140 PF01418 Helix-turn-helix domain, rpiR family ShL2_RS03140 PF01380 SIS domain ShL2_RS03145 PF02378 Phosphotransferase system, EIIC ShL2_RS03145 PF00367 phosphotransferase system, EIIB ShL2_RS03150 PF01380 SIS domain ShL2_RS03165 PF13280 WYL domain ShL2_RS03165 PF08279 HTH domain ShL2_RS03175 PF03816 Cell envelope-related transcriptional attenuator domain ShL2_RS03180 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ShL2_RS03180 PF01568 Molydopterin dinucleotide binding domain ShL2_RS03180 PF00384 Molybdopterin oxidoreductase ShL2_RS03180 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ShL2_RS03180 PF12838 4Fe-4S dicluster domain ShL2_RS03185 PF06689 ClpX C4-type zinc finger ShL2_RS03185 PF10431 C-terminal, D2-small domain, of ClpB protein ShL2_RS03185 PF07724 AAA domain (Cdc48 subfamily) ShL2_RS03200 PF01494 FAD binding domain ShL2_RS03205 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ShL2_RS03205 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ShL2_RS03210 PF00893 Small Multidrug Resistance protein ShL2_RS03215 PF00893 Small Multidrug Resistance protein ShL2_RS03220 PF05257 CHAP domain ShL2_RS03230 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain ShL2_RS03230 PF02558 Ketopantoate reductase PanE/ApbA ShL2_RS03235 PF03553 Na+/H+ antiporter family ShL2_RS03240 PF01610 Transposase ShL2_RS03240 PF13683 Integrase core domain ShL2_RS03245 PF05257 CHAP domain ShL2_RS03270 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ShL2_RS03270 PF02770 Acyl-CoA dehydrogenase, middle domain ShL2_RS03270 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ShL2_RS03275 PF01497 Periplasmic binding protein ShL2_RS03280 PF01156 Inosine-uridine preferring nucleoside hydrolase ShL2_RS03285 PF02632 BioY family ShL2_RS03295 PF02634 FdhD/NarQ family ShL2_RS03305 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS03315 PF00899 ThiF family ShL2_RS03320 PF00994 Probable molybdopterin binding domain ShL2_RS03325 PF01967 MoaC family ShL2_RS03330 PF03453 MoeA N-terminal region (domain I and II) ShL2_RS03330 PF03454 MoeA C-terminal region (domain IV) ShL2_RS03330 PF00994 Probable molybdopterin binding domain ShL2_RS03340 PF02391 MoaE protein ShL2_RS03345 PF02597 ThiS family ShL2_RS03350 PF12804 MobA-like NTP transferase domain ShL2_RS03355 PF04055 Radical SAM superfamily ShL2_RS03355 PF06463 Molybdenum Cofactor Synthesis C ShL2_RS03360 PF01047 MarR family ShL2_RS03370 PF01047 MarR family ShL2_RS03380 PF02388 FemAB family ShL2_RS03385 PF00873 AcrB/AcrD/AcrF family ShL2_RS03405 PF06800 Sugar transport protein ShL2_RS03415 PF01751 Toprim domain ShL2_RS03415 PF01131 DNA topoisomerase ShL2_RS03420 PF00860 Permease family ShL2_RS03430 PF00338 Ribosomal protein S10p/S20e ShL2_RS03435 PF00297 Ribosomal protein L3 ShL2_RS03440 PF00573 Ribosomal protein L4/L1 family ShL2_RS03445 PF00276 Ribosomal protein L23 ShL2_RS03450 PF00181 Ribosomal Proteins L2, RNA binding domain ShL2_RS03450 PF03947 Ribosomal Proteins L2, C-terminal domain ShL2_RS03455 PF00203 Ribosomal protein S19 ShL2_RS03460 PF00237 Ribosomal protein L22p/L17e ShL2_RS03465 PF00189 Ribosomal protein S3, C-terminal domain ShL2_RS03465 PF07650 KH domain ShL2_RS03470 PF00252 Ribosomal protein L16p/L10e ShL2_RS03475 PF00831 Ribosomal L29 protein ShL2_RS03480 PF00366 Ribosomal protein S17 ShL2_RS03485 PF00238 Ribosomal protein L14p/L23e ShL2_RS03490 PF00467 KOW motif ShL2_RS03490 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ShL2_RS03495 PF00281 Ribosomal protein L5 ShL2_RS03495 PF00673 ribosomal L5P family C-terminus ShL2_RS03500 PF00253 Ribosomal protein S14p/S29e ShL2_RS03505 PF00410 Ribosomal protein S8 ShL2_RS03510 PF00347 Ribosomal protein L6 ShL2_RS03515 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ShL2_RS03520 PF03719 Ribosomal protein S5, C-terminal domain ShL2_RS03520 PF00333 Ribosomal protein S5, N-terminal domain ShL2_RS03525 PF00327 Ribosomal protein L30p/L7e ShL2_RS03530 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ShL2_RS03535 PF00344 SecY translocase ShL2_RS03540 PF05191 Adenylate kinase, active site lid ShL2_RS03545 PF01176 Translation initiation factor 1A / IF-1 ShL2_RS03550 PF00444 Ribosomal protein L36 ShL2_RS03555 PF00416 Ribosomal protein S13/S18 ShL2_RS03560 PF00411 Ribosomal protein S11 ShL2_RS03565 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ShL2_RS03565 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ShL2_RS03565 PF01000 RNA polymerase Rpb3/RpoA insert domain ShL2_RS03570 PF01196 Ribosomal protein L17 ShL2_RS03580 PF00005 ABC transporter ShL2_RS03585 PF02361 Cobalt transport protein ShL2_RS03590 PF01416 tRNA pseudouridine synthase ShL2_RS03595 PF00572 Ribosomal protein L13 ShL2_RS03600 PF00380 Ribosomal protein S9/S16 ShL2_RS03605 PF02146 Sir2 family ShL2_RS03610 PF00455 DeoR C terminal sensor domain ShL2_RS03610 PF08220 DeoR-like helix-turn-helix domain ShL2_RS03620 PF02502 Ribose/Galactose Isomerase ShL2_RS03625 PF02502 Ribose/Galactose Isomerase ShL2_RS03630 PF00294 pfkB family carbohydrate kinase ShL2_RS03635 PF01791 DeoC/LacD family aldolase ShL2_RS03640 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ShL2_RS03645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ShL2_RS03645 PF02378 Phosphotransferase system, EIIC ShL2_RS03650 PF00232 Glycosyl hydrolase family 1 ShL2_RS03660 PF00296 Luciferase-like monooxygenase ShL2_RS03665 PF00107 Zinc-binding dehydrogenase ShL2_RS03665 PF08240 Alcohol dehydrogenase GroES-like domain ShL2_RS03670 PF02028 BCCT, betaine/carnitine/choline family transporter ShL2_RS03685 PF03780 Asp23 family, cell envelope-related function ShL2_RS03700 PF04183 IucA / IucC family ShL2_RS03700 PF06276 Ferric iron reductase FhuF-like transporter ShL2_RS03705 PF05977 Transmembrane secretion effector ShL2_RS03710 PF06276 Ferric iron reductase FhuF-like transporter ShL2_RS03710 PF04183 IucA / IucC family ShL2_RS03715 PF01168 Alanine racemase, N-terminal domain ShL2_RS03720 PF01497 Periplasmic binding protein ShL2_RS03725 PF01032 FecCD transport family ShL2_RS03730 PF01032 FecCD transport family ShL2_RS03735 PF07670 Nucleoside recognition ShL2_RS03740 PF03992 Antibiotic biosynthesis monooxygenase ShL2_RS03750 PF04307 LexA-binding, inner membrane-associated putative hydrolase ShL2_RS03755 PF01704 UTP--glucose-1-phosphate uridylyltransferase ShL2_RS03760 PF03006 Haemolysin-III related ShL2_RS03765 PF07690 Major Facilitator Superfamily ShL2_RS03770 PF17080 Multidrug Resistance efflux pump ShL2_RS03775 PF07690 Major Facilitator Superfamily ShL2_RS03780 PF10609 NUBPL iron-transfer P-loop NTPase ShL2_RS03785 PF13683 Integrase core domain ShL2_RS03785 PF01610 Transposase ShL2_RS03835 PF02457 DisA bacterial checkpoint controller nucleotide-binding ShL2_RS03845 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ShL2_RS03845 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ShL2_RS03845 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ShL2_RS03845 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ShL2_RS03850 PF01380 SIS domain ShL2_RS03855 PF00005 ABC transporter ShL2_RS03880 PF01545 Cation efflux family ShL2_RS03880 PF16916 Dimerisation domain of Zinc Transporter ShL2_RS03885 PF01022 Bacterial regulatory protein, arsR family ShL2_RS03890 PF13460 NAD(P)H-binding ShL2_RS03895 PF01238 Phosphomannose isomerase type I ShL2_RS03915 PF00210 Ferritin-like domain ShL2_RS03920 PF01048 Phosphorylase superfamily ShL2_RS03925 PF01791 DeoC/LacD family aldolase ShL2_RS03935 PF01676 Metalloenzyme superfamily ShL2_RS03945 PF02664 S-Ribosylhomocysteinase (LuxS) ShL2_RS03965 PF03630 Fumble ShL2_RS03975 PF05066 HB1, ASXL, restriction endonuclease HTH domain ShL2_RS03980 PF00117 Glutamine amidotransferase class-I ShL2_RS03980 PF06418 CTP synthase N-terminus ShL2_RS03990 PF01116 Fructose-bisphosphate aldolase class-II ShL2_RS03995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ShL2_RS04005 PF00171 Aldehyde dehydrogenase family ShL2_RS04010 PF07497 Rho termination factor, RNA-binding domain ShL2_RS04010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ShL2_RS04010 PF07498 Rho termination factor, N-terminal domain ShL2_RS04015 PF01197 Ribosomal protein L31 ShL2_RS04020 PF00265 Thymidine kinase ShL2_RS04025 PF03462 PCRF domain ShL2_RS04025 PF00472 RF-1 domain ShL2_RS04030 PF17827 PrmC N-terminal domain ShL2_RS04030 PF05175 Methyltransferase small domain ShL2_RS04035 PF01300 Telomere recombination ShL2_RS04035 PF03481 Putative GTP-binding controlling metal-binding ShL2_RS04040 PF01451 Low molecular weight phosphotyrosine protein phosphatase ShL2_RS04045 PF04260 Protein of unknown function (DUF436) ShL2_RS04050 PF00464 Serine hydroxymethyltransferase ShL2_RS04060 PF02350 UDP-N-acetylglucosamine 2-epimerase ShL2_RS04070 PF00119 ATP synthase A chain ShL2_RS04075 PF00137 ATP synthase subunit C ShL2_RS04080 PF00430 ATP synthase B/B' CF(0) ShL2_RS04085 PF00213 ATP synthase delta (OSCP) subunit ShL2_RS04090 PF02874 ATP synthase alpha/beta family, beta-barrel domain ShL2_RS04090 PF00306 ATP synthase alpha/beta chain, C terminal domain ShL2_RS04090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ShL2_RS04095 PF00231 ATP synthase ShL2_RS04100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ShL2_RS04100 PF02874 ATP synthase alpha/beta family, beta-barrel domain ShL2_RS04105 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ShL2_RS04105 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ShL2_RS04115 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ShL2_RS04120 PF07977 FabA-like domain ShL2_RS04130 PF00436 Single-strand binding protein family ShL2_RS04135 PF06737 Transglycosylase-like domain ShL2_RS04140 PF03070 TENA/THI-4/PQQC family ShL2_RS04145 PF08543 Phosphomethylpyrimidine kinase ShL2_RS04150 PF02110 Hydroxyethylthiazole kinase family ShL2_RS04155 PF02581 Thiamine monophosphate synthase ShL2_RS04165 PF13683 Integrase core domain ShL2_RS04165 PF01610 Transposase ShL2_RS04175 PF13091 PLD-like domain ShL2_RS04175 PF13396 Phospholipase_D-nuclease N-terminal ShL2_RS04180 PF02583 Metal-sensitive transcriptional repressor ShL2_RS04195 PF01098 Cell cycle protein ShL2_RS04200 PF07478 D-ala D-ala ligase C-terminus ShL2_RS04200 PF01820 D-ala D-ala ligase N-terminus ShL2_RS04205 PF08245 Mur ligase middle domain ShL2_RS04205 PF02875 Mur ligase family, glutamate ligase domain ShL2_RS04205 PF01225 Mur ligase family, catalytic domain ShL2_RS04210 PF00270 DEAD/DEAH box helicase ShL2_RS04210 PF00271 Helicase conserved C-terminal domain ShL2_RS04220 PF03703 Bacterial PH domain ShL2_RS04225 PF03703 Bacterial PH domain ShL2_RS04230 PF01648 4'-phosphopantetheinyl transferase superfamily ShL2_RS04235 PF00842 Alanine racemase, C-terminal domain ShL2_RS04235 PF01168 Alanine racemase, N-terminal domain ShL2_RS04245 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ShL2_RS04250 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain ShL2_RS04250 PF07228 Stage II sporulation protein E (SpoIIE) ShL2_RS04255 PF01740 STAS domain ShL2_RS04260 PF13581 Histidine kinase-like ATPase domain ShL2_RS04265 PF04542 Sigma-70 region 2 ShL2_RS04265 PF04545 Sigma-70, region 4 ShL2_RS04265 PF04539 Sigma-70 region 3 ShL2_RS04270 PF17674 HHH domain ShL2_RS04270 PF00575 S1 RNA binding domain ShL2_RS04270 PF09371 Tex-like protein N-terminal domain ShL2_RS04270 PF16921 Tex protein YqgF-like domain ShL2_RS04275 PF10263 SprT-like family ShL2_RS04275 PF17283 SprT-like zinc ribbon domain ShL2_RS04310 PF00585 C-terminal regulatory domain of Threonine dehydratase ShL2_RS04310 PF00291 Pyridoxal-phosphate dependent enzyme ShL2_RS04315 PF00694 Aconitase C-terminal domain ShL2_RS04320 PF00330 Aconitase family (aconitate hydratase) ShL2_RS04325 PF00180 Isocitrate/isopropylmalate dehydrogenase ShL2_RS04330 PF00682 HMGL-like ShL2_RS04330 PF08502 LeuA allosteric (dimerisation) domain ShL2_RS04340 PF10369 Small subunit of acetolactate synthase ShL2_RS04345 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ShL2_RS04345 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ShL2_RS04345 PF00205 Thiamine pyrophosphate enzyme, central domain ShL2_RS04350 PF00920 Dehydratase family ShL2_RS04355 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ShL2_RS04360 PF00814 Glycoprotease family ShL2_RS04365 PF00583 Acetyltransferase (GNAT) family ShL2_RS04370 PF00814 Glycoprotease family ShL2_RS04375 PF00005 ABC transporter ShL2_RS04375 PF16326 ABC transporter C-terminal domain ShL2_RS04375 PF12848 ABC transporter ShL2_RS04380 PF06971 Putative DNA-binding protein N-terminus ShL2_RS04380 PF02629 CoA binding domain ShL2_RS04385 PF04143 Sulphur transport ShL2_RS04390 PF01206 Sulfurtransferase TusA ShL2_RS04400 PF13407 Periplasmic binding protein domain ShL2_RS04400 PF00356 Bacterial regulatory proteins, lacI family ShL2_RS04410 PF00294 pfkB family carbohydrate kinase ShL2_RS04415 PF04397 LytTr DNA-binding domain ShL2_RS04415 PF00072 Response regulator receiver domain ShL2_RS04430 PF04647 Accessory gene regulator B ShL2_RS04435 PF00795 Carbon-nitrogen hydrolase ShL2_RS04450 PF02517 CPBP intramembrane metalloprotease ShL2_RS04455 PF00166 Chaperonin 10 Kd subunit ShL2_RS04460 PF00118 TCP-1/cpn60 chaperonin family ShL2_RS04465 PF14659 Phage integrase, N-terminal SAM-like domain ShL2_RS04465 PF00589 Phage integrase family ShL2_RS04480 PF00872 Transposase, Mutator family ShL2_RS04525 PF00392 Bacterial regulatory proteins, gntR family ShL2_RS04530 PF00005 ABC transporter ShL2_RS04540 PF00005 ABC transporter ShL2_RS04575 PF10282 Lactonase, 7-bladed beta-propeller ShL2_RS04580 PF00171 Aldehyde dehydrogenase family ShL2_RS04585 PF01368 DHH family ShL2_RS04585 PF02833 DHHA2 domain ShL2_RS04590 PF00857 Isochorismatase family ShL2_RS04600 PF01817 Chorismate mutase type II ShL2_RS04600 PF00800 Prephenate dehydratase ShL2_RS04605 PF02898 Nitric oxide synthase, oxygenase domain ShL2_RS04610 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ShL2_RS04610 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ShL2_RS04610 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ShL2_RS04615 PF02540 NAD synthase ShL2_RS04620 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ShL2_RS04625 PF00206 Lyase ShL2_RS04625 PF10397 Adenylosuccinate lyase C-terminus ShL2_RS04630 PF01371 Trp repressor protein ShL2_RS04635 PF01884 PcrB family ShL2_RS04640 PF00580 UvrD/REP helicase N-terminal domain ShL2_RS04640 PF13361 UvrD-like helicase C-terminal domain ShL2_RS04645 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ShL2_RS04645 PF12826 Helix-hairpin-helix motif ShL2_RS04645 PF03120 NAD-dependent DNA ligase OB-fold domain ShL2_RS04645 PF00533 BRCA1 C Terminus (BRCT) domain ShL2_RS04645 PF01653 NAD-dependent DNA ligase adenylation domain ShL2_RS04650 PF07537 CamS sex pheromone cAM373 precursor ShL2_RS04655 PF00474 Sodium:solute symporter family ShL2_RS04660 PF02686 Glu-tRNAGln amidotransferase C subunit ShL2_RS04665 PF01425 Amidase ShL2_RS04670 PF02934 GatB/GatE catalytic domain ShL2_RS04670 PF02637 GatB domain ShL2_RS04675 PF00781 Diacylglycerol kinase catalytic domain ShL2_RS04680 PF05958 tRNA (Uracil-5-)-methyltransferase ShL2_RS04690 PF11799 impB/mucB/samB family C-terminal domain ShL2_RS04690 PF00817 impB/mucB/samB family ShL2_RS04700 PF00210 Ferritin-like domain ShL2_RS04705 PF08353 Domain of unknown function (DUF1727) ShL2_RS04705 PF08245 Mur ligase middle domain ShL2_RS04710 PF07685 CobB/CobQ-like glutamine amidotransferase domain ShL2_RS04715 PF01610 Transposase ShL2_RS04715 PF13683 Integrase core domain ShL2_RS04725 PF00557 Metallopeptidase family M24 ShL2_RS04730 PF00106 short chain dehydrogenase ShL2_RS04750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS04750 PF07730 Histidine kinase ShL2_RS04755 PF00196 Bacterial regulatory proteins, luxR family ShL2_RS04755 PF00072 Response regulator receiver domain ShL2_RS04760 PF03631 Virulence factor BrkB ShL2_RS04770 PF01451 Low molecular weight phosphotyrosine protein phosphatase ShL2_RS04775 PF06569 Protein of unknown function (DUF1128) ShL2_RS04780 PF02073 Thermophilic metalloprotease (M29) ShL2_RS04785 PF03061 Thioesterase superfamily ShL2_RS04805 PF01965 DJ-1/PfpI family ShL2_RS04810 PF00912 Transglycosylase ShL2_RS04825 PF00005 ABC transporter ShL2_RS04825 PF01476 LysM domain ShL2_RS04835 PF00872 Transposase, Mutator family ShL2_RS04840 PF04307 LexA-binding, inner membrane-associated putative hydrolase ShL2_RS04845 PF00730 HhH-GPD superfamily base excision DNA repair protein ShL2_RS04845 PF14815 NUDIX domain ShL2_RS04850 PF04167 Protein of unknown function (DUF402) ShL2_RS04855 PF00664 ABC transporter transmembrane region ShL2_RS04855 PF00005 ABC transporter ShL2_RS04865 PF06081 Aromatic acid exporter family member 1 ShL2_RS04870 PF00202 Aminotransferase class-III ShL2_RS04875 PF00578 AhpC/TSA family ShL2_RS04880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ShL2_RS04880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ShL2_RS04885 PF01475 Ferric uptake regulator family ShL2_RS05050 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS05055 PF00005 ABC transporter ShL2_RS05060 PF08331 Domain of unknown function (DUF1730) ShL2_RS05065 PF00588 SpoU rRNA Methylase family ShL2_RS05070 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ShL2_RS05080 PF10415 Fumarase C C-terminus ShL2_RS05080 PF00206 Lyase ShL2_RS05085 PF01479 S4 domain ShL2_RS05085 PF00849 RNA pseudouridylate synthase ShL2_RS05090 PF13185 GAF domain ShL2_RS05090 PF07730 Histidine kinase ShL2_RS05095 PF00072 Response regulator receiver domain ShL2_RS05095 PF00196 Bacterial regulatory proteins, luxR family ShL2_RS05105 PF04286 Protein of unknown function (DUF445) ShL2_RS05110 PF06133 Control of competence regulator ComK, YlbF/YmcA ShL2_RS05120 PF13514 AAA domain ShL2_RS05125 PF01336 OB-fold nucleic acid binding domain ShL2_RS05125 PF01966 HD domain ShL2_RS05145 PF01230 HIT domain ShL2_RS05150 PF00005 ABC transporter ShL2_RS05155 PF05975 Bacterial ABC transporter protein EcsB ShL2_RS05165 PF01208 Uroporphyrinogen decarboxylase (URO-D) ShL2_RS05170 PF00762 Ferrochelatase ShL2_RS05175 PF01593 Flavin containing amine oxidoreductase ShL2_RS05225 PF00501 AMP-binding enzyme ShL2_RS05225 PF13193 AMP-binding enzyme C-terminal domain ShL2_RS05235 PF01809 Putative membrane protein insertion efficiency factor ShL2_RS05240 PF00293 NUDIX domain ShL2_RS05245 PF00326 Prolyl oligopeptidase family ShL2_RS05250 PF01293 Phosphoenolpyruvate carboxykinase ShL2_RS05255 PF00438 S-adenosylmethionine synthetase, N-terminal domain ShL2_RS05255 PF02772 S-adenosylmethionine synthetase, central domain ShL2_RS05255 PF02773 S-adenosylmethionine synthetase, C-terminal domain ShL2_RS05265 PF00248 Aldo/keto reductase family ShL2_RS05285 PF00923 Transaldolase/Fructose-6-phosphate aldolase ShL2_RS05300 PF00196 Bacterial regulatory proteins, luxR family ShL2_RS05300 PF04542 Sigma-70 region 2 ShL2_RS05310 PF13457 GW (Gly-Tryp) dipeptide domain ShL2_RS05310 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ShL2_RS05325 PF01872 RibD C-terminal domain ShL2_RS05325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ShL2_RS05330 PF00677 Lumazine binding domain ShL2_RS05335 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ShL2_RS05335 PF00925 GTP cyclohydrolase II ShL2_RS05340 PF00885 6,7-dimethyl-8-ribityllumazine synthase ShL2_RS05345 PF01619 Proline dehydrogenase ShL2_RS05350 PF12146 Serine aminopeptidase, S33 ShL2_RS05355 PF00872 Transposase, Mutator family ShL2_RS05360 PF01047 MarR family ShL2_RS05365 PF06962 Putative rRNA methylase ShL2_RS05375 PF07690 Major Facilitator Superfamily ShL2_RS05380 PF08264 Anticodon-binding domain of tRNA ShL2_RS05380 PF00133 tRNA synthetases class I (I, L, M and V) ShL2_RS05380 PF13603 Leucyl-tRNA synthetase, Domain 2 ShL2_RS05380 PF09334 tRNA synthetases class I (M) ShL2_RS05395 PF07564 Domain of Unknown Function (DUF1542) ShL2_RS05395 PF01468 GA module ShL2_RS05405 PF14667 Polysaccharide biosynthesis C-terminal domain ShL2_RS05405 PF01943 Polysaccharide biosynthesis protein ShL2_RS05410 PF00849 RNA pseudouridylate synthase ShL2_RS05410 PF01479 S4 domain ShL2_RS05420 PF01546 Peptidase family M20/M25/M40 ShL2_RS05425 PF01063 Amino-transferase class IV ShL2_RS05430 PF01636 Phosphotransferase enzyme family ShL2_RS05435 PF02390 Putative methyltransferase ShL2_RS05445 PF00753 Metallo-beta-lactamase superfamily ShL2_RS05455 PF05343 M42 glutamyl aminopeptidase ShL2_RS05460 PF00085 Thioredoxin ShL2_RS05465 PF07285 Protein of unknown function (DUF1444) ShL2_RS05470 PF01588 Putative tRNA binding domain ShL2_RS05470 PF14794 Domain of unknown function (DUF4479) ShL2_RS05485 PF08245 Mur ligase middle domain ShL2_RS05485 PF01225 Mur ligase family, catalytic domain ShL2_RS05485 PF02875 Mur ligase family, glutamate ligase domain ShL2_RS05490 PF06103 Bacterial protein of unknown function (DUF948) ShL2_RS05505 PF01817 Chorismate mutase type II ShL2_RS05505 PF00793 DAHP synthetase I family ShL2_RS05510 PF00356 Bacterial regulatory proteins, lacI family ShL2_RS05515 PF00850 Histone deacetylase domain ShL2_RS05520 PF00583 Acetyltransferase (GNAT) family ShL2_RS05525 PF00501 AMP-binding enzyme ShL2_RS05525 PF13193 AMP-binding enzyme C-terminal domain ShL2_RS05530 PF01268 Formate--tetrahydrofolate ligase ShL2_RS05535 PF00905 Penicillin binding protein transpeptidase domain ShL2_RS05535 PF00912 Transglycosylase ShL2_RS05540 PF00579 tRNA synthetases class I (W and Y) ShL2_RS05540 PF01479 S4 domain ShL2_RS05550 PF07690 Major Facilitator Superfamily ShL2_RS05555 PF13180 PDZ domain ShL2_RS05560 PF01553 Acyltransferase ShL2_RS05565 PF00367 phosphotransferase system, EIIB ShL2_RS05565 PF02378 Phosphotransferase system, EIIC ShL2_RS05575 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ShL2_RS05575 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ShL2_RS05575 PF01842 ACT domain ShL2_RS05580 PF00266 Aminotransferase class-V ShL2_RS05585 PF02566 OsmC-like protein ShL2_RS05590 PF03009 Glycerophosphoryl diester phosphodiesterase family ShL2_RS05595 PF01479 S4 domain ShL2_RS05595 PF00163 Ribosomal protein S4/S9 N-terminal domain ShL2_RS05600 PF13185 GAF domain ShL2_RS05605 PF06160 Septation ring formation regulator, EzrA ShL2_RS05615 PF02568 Thiamine biosynthesis protein (ThiI) ShL2_RS05615 PF02926 THUMP domain ShL2_RS05620 PF01925 Sulfite exporter TauE/SafE ShL2_RS05625 PF08534 Redoxin ShL2_RS05630 PF02384 N-6 DNA Methylase ShL2_RS05640 PF00582 Universal stress protein family ShL2_RS05645 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ShL2_RS05645 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ShL2_RS05650 PF01321 Creatinase/Prolidase N-terminal domain ShL2_RS05650 PF00557 Metallopeptidase family M24 ShL2_RS05665 PF00571 CBS domain ShL2_RS05665 PF03061 Thioesterase superfamily ShL2_RS05665 PF07085 DRTGG domain ShL2_RS05665 PF00392 Bacterial regulatory proteins, gntR family ShL2_RS05670 PF02272 DHHA1 domain ShL2_RS05670 PF01368 DHH family ShL2_RS05675 PF01336 OB-fold nucleic acid binding domain ShL2_RS05675 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ShL2_RS05675 PF07733 Bacterial DNA polymerase III alpha NTPase domain ShL2_RS05675 PF14579 Helix-hairpin-helix motif ShL2_RS05675 PF02811 PHP domain ShL2_RS05680 PF03949 Malic enzyme, NAD binding domain ShL2_RS05680 PF00390 Malic enzyme, N-terminal domain ShL2_RS05685 PF17848 Acetyl-coA carboxylase zinc finger domain ShL2_RS05685 PF01039 Carboxyl transferase domain ShL2_RS05690 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ShL2_RS05695 PF00365 Phosphofructokinase ShL2_RS05700 PF02887 Pyruvate kinase, alpha/beta domain ShL2_RS05700 PF00391 PEP-utilising enzyme, mobile domain ShL2_RS05700 PF00224 Pyruvate kinase, barrel domain ShL2_RS05705 PF01207 Dihydrouridine synthase (Dus) ShL2_RS05710 PF00324 Amino acid permease ShL2_RS05715 PF00285 Citrate synthase, C-terminal domain ShL2_RS05720 PF00180 Isocitrate/isopropylmalate dehydrogenase ShL2_RS05725 PF00072 Response regulator receiver domain ShL2_RS05725 PF00486 Transcriptional regulatory protein, C terminal ShL2_RS05730 PF00512 His Kinase A (phospho-acceptor) domain ShL2_RS05730 PF00989 PAS fold ShL2_RS05730 PF16736 Single Cache-like ShL2_RS05730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS05735 PF00476 DNA polymerase family A ShL2_RS05735 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ShL2_RS05735 PF01367 5'-3' exonuclease, C-terminal SAM fold ShL2_RS05740 PF06827 Zinc finger found in FPG and IleRS ShL2_RS05740 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ShL2_RS05740 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ShL2_RS05745 PF01121 Dephospho-CoA kinase ShL2_RS05755 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ShL2_RS05755 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ShL2_RS05760 PF03477 ATP cone domain ShL2_RS05770 PF07319 Primosomal protein DnaI N-terminus ShL2_RS05770 PF01695 IstB-like ATP binding protein ShL2_RS05775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ShL2_RS05775 PF03129 Anticodon binding domain ShL2_RS05775 PF02824 TGS domain ShL2_RS05775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ShL2_RS05780 PF00324 Amino acid permease ShL2_RS05785 PF00707 Translation initiation factor IF-3, C-terminal domain ShL2_RS05785 PF05198 Translation initiation factor IF-3, N-terminal domain ShL2_RS05790 PF01632 Ribosomal protein L35 ShL2_RS05795 PF00453 Ribosomal protein L20 ShL2_RS05810 PF05698 Bacterial trigger factor protein (TF) C-terminus ShL2_RS05810 PF05697 Bacterial trigger factor protein (TF) ShL2_RS05810 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ShL2_RS05815 PF10431 C-terminal, D2-small domain, of ClpB protein ShL2_RS05815 PF07724 AAA domain (Cdc48 subfamily) ShL2_RS05815 PF06689 ClpX C4-type zinc finger ShL2_RS05820 PF01610 Transposase ShL2_RS05820 PF13683 Integrase core domain ShL2_RS05825 PF01926 50S ribosome-binding GTPase ShL2_RS05830 PF01488 Shikimate / quinate 5-dehydrogenase ShL2_RS05830 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ShL2_RS05830 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ShL2_RS05835 PF01578 Cytochrome C assembly protein ShL2_RS05840 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ShL2_RS05840 PF03900 Porphobilinogen deaminase, C-terminal domain ShL2_RS05850 PF00490 Delta-aminolevulinic acid dehydratase ShL2_RS05855 PF00202 Aminotransferase class-III ShL2_RS05865 PF03352 Methyladenine glycosylase ShL2_RS05870 PF10458 Valyl tRNA synthetase tRNA binding arm ShL2_RS05870 PF08264 Anticodon-binding domain of tRNA ShL2_RS05870 PF00133 tRNA synthetases class I (I, L, M and V) ShL2_RS05875 PF02875 Mur ligase family, glutamate ligase domain ShL2_RS05875 PF08245 Mur ligase middle domain ShL2_RS05880 PF04002 RadC-like JAB domain ShL2_RS05900 PF04085 rod shape-determining protein MreC ShL2_RS05910 PF00829 Ribosomal prokaryotic L21 protein ShL2_RS05915 PF04327 Cysteine protease Prp ShL2_RS05920 PF01016 Ribosomal L27 protein ShL2_RS05925 PF01926 50S ribosome-binding GTPase ShL2_RS05925 PF09269 Domain of unknown function (DUF1967) ShL2_RS05925 PF01018 GTP1/OBG ShL2_RS05935 PF07499 RuvA, C-terminal domain ShL2_RS05935 PF01330 RuvA N terminal domain ShL2_RS05940 PF05491 RuvB C-terminal winged helix domain ShL2_RS05940 PF05496 Holliday junction DNA helicase RuvB P-loop domain ShL2_RS05940 PF17864 RuvB AAA lid domain ShL2_RS05945 PF02547 Queuosine biosynthesis protein ShL2_RS05950 PF01702 Queuine tRNA-ribosyltransferase ShL2_RS05955 PF02699 Preprotein translocase subunit ShL2_RS05960 PF02355 Protein export membrane protein ShL2_RS05960 PF07549 SecD/SecF GG Motif ShL2_RS05965 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ShL2_RS05965 PF17768 RecJ OB domain ShL2_RS05965 PF02272 DHHA1 domain ShL2_RS05965 PF01368 DHH family ShL2_RS05970 PF00156 Phosphoribosyl transferase domain ShL2_RS05975 PF02824 TGS domain ShL2_RS05975 PF04607 Region found in RelA / SpoT proteins ShL2_RS05975 PF13291 ACT domain ShL2_RS05980 PF02580 D-Tyr-tRNA(Tyr) deacylase ShL2_RS05985 PF01520 N-acetylmuramoyl-L-alanine amidase ShL2_RS05985 PF08239 Bacterial SH3 domain ShL2_RS05990 PF13393 Histidyl-tRNA synthetase ShL2_RS05990 PF03129 Anticodon binding domain ShL2_RS05995 PF00152 tRNA synthetases class II (D, K and N) ShL2_RS05995 PF02938 GAD domain ShL2_RS05995 PF01336 OB-fold nucleic acid binding domain ShL2_RS06000 PF00899 ThiF family ShL2_RS06005 PF16193 AAA C-terminal domain ShL2_RS06005 PF05496 Holliday junction DNA helicase RuvB P-loop domain ShL2_RS06005 PF12002 MgsA AAA+ ATPase C terminal ShL2_RS06010 PF02082 Transcriptional regulator ShL2_RS06015 PF00296 Luciferase-like monooxygenase ShL2_RS06020 PF00266 Aminotransferase class-V ShL2_RS06035 PF13538 UvrD-like helicase C-terminal domain ShL2_RS06035 PF14490 Helix-hairpin-helix containing domain ShL2_RS06035 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ShL2_RS06040 PF01411 tRNA synthetases class II (A) ShL2_RS06040 PF02272 DHHA1 domain ShL2_RS06040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ShL2_RS06045 PF06135 IreB regulatory phosphoprotein ShL2_RS06050 PF03652 Holliday junction resolvase ShL2_RS06055 PF06949 Protein of unknown function (DUF1292) ShL2_RS06065 PF01136 Peptidase family U32 ShL2_RS06070 PF01136 Peptidase family U32 ShL2_RS06070 PF16325 Peptidase family U32 C-terminal domain ShL2_RS06075 PF00485 Phosphoribulokinase / Uridine kinase family ShL2_RS06080 PF01272 Transcription elongation factor, GreA/GreB, C-term ShL2_RS06080 PF03449 Transcription elongation factor, N-terminal ShL2_RS06085 PF02682 Carboxyltransferase domain, subdomain C and D ShL2_RS06090 PF02626 Carboxyltransferase domain, subdomain A and B ShL2_RS06095 PF00364 Biotin-requiring enzyme ShL2_RS06100 PF02785 Biotin carboxylase C-terminal domain ShL2_RS06100 PF00289 Biotin carboxylase, N-terminal domain ShL2_RS06100 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ShL2_RS06105 PF03746 LamB/YcsF family ShL2_RS06110 PF01566 Natural resistance-associated macrophage protein ShL2_RS06115 PF01048 Phosphorylase superfamily ShL2_RS06125 PF01926 50S ribosome-binding GTPase ShL2_RS06130 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ShL2_RS06130 PF01488 Shikimate / quinate 5-dehydrogenase ShL2_RS06130 PF08501 Shikimate dehydrogenase substrate binding domain ShL2_RS06135 PF01985 CRS1 / YhbY (CRM) domain ShL2_RS06140 PF01467 Cytidylyltransferase-like ShL2_RS06145 PF01966 HD domain ShL2_RS06155 PF13649 Methyltransferase domain ShL2_RS06165 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ShL2_RS06170 PF03772 Competence protein ShL2_RS06170 PF13567 Domain of unknown function (DUF4131) ShL2_RS06170 PF00753 Metallo-beta-lactamase superfamily ShL2_RS06175 PF06144 DNA polymerase III, delta subunit ShL2_RS06185 PF01649 Ribosomal protein S20 ShL2_RS06190 PF00679 Elongation factor G C-terminus ShL2_RS06190 PF03144 Elongation factor Tu domain 2 ShL2_RS06190 PF06421 GTP-binding protein LepA C-terminus ShL2_RS06190 PF00009 Elongation factor Tu GTP binding domain ShL2_RS06195 PF06969 HemN C-terminal domain ShL2_RS06195 PF04055 Radical SAM superfamily ShL2_RS06200 PF01628 HrcA protein C terminal domain ShL2_RS06205 PF01025 GrpE ShL2_RS06210 PF00012 Hsp70 protein ShL2_RS06215 PF00684 DnaJ central domain ShL2_RS06215 PF01556 DnaJ C terminal domain ShL2_RS06215 PF00226 DnaJ domain ShL2_RS06225 PF04452 RNA methyltransferase ShL2_RS06230 PF04055 Radical SAM superfamily ShL2_RS06230 PF01938 TRAM domain ShL2_RS06230 PF00919 Uncharacterized protein family UPF0004 ShL2_RS06235 PF01165 Ribosomal protein S21 ShL2_RS06240 PF01972 Serine dehydrogenase proteinase ShL2_RS06240 PF01957 NfeD-like C-terminal, partner-binding ShL2_RS06245 PF12127 SigmaW regulon antibacterial ShL2_RS06255 PF02562 PhoH-like protein ShL2_RS06260 PF02130 Uncharacterized protein family UPF0054 ShL2_RS06265 PF01219 Prokaryotic diacylglycerol kinase ShL2_RS06270 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ShL2_RS06275 PF01926 50S ribosome-binding GTPase ShL2_RS06275 PF07650 KH domain ShL2_RS06280 PF11967 Recombination protein O N terminal ShL2_RS06280 PF02565 Recombination protein O C terminal ShL2_RS06290 PF08279 HTH domain ShL2_RS06290 PF00571 CBS domain ShL2_RS06295 PF03618 Kinase/pyrophosphorylase ShL2_RS06300 PF00772 DnaB-like helicase N terminal domain ShL2_RS06300 PF01807 CHC2 zinc finger ShL2_RS06300 PF08275 DNA primase catalytic core, N-terminal domain ShL2_RS06305 PF04542 Sigma-70 region 2 ShL2_RS06305 PF03979 Sigma-70 factor, region 1.1 ShL2_RS06305 PF04539 Sigma-70 region 3 ShL2_RS06305 PF04545 Sigma-70, region 4 ShL2_RS06305 PF00140 Sigma-70 factor, region 1.2 ShL2_RS06310 PF04816 tRNA (adenine(22)-N(1))-methyltransferase ShL2_RS06315 PF01784 NIF3 (NGG1p interacting factor 3) ShL2_RS06320 PF00270 DEAD/DEAH box helicase ShL2_RS06320 PF00271 Helicase conserved C-terminal domain ShL2_RS06325 PF01261 Xylose isomerase-like TIM barrel ShL2_RS06330 PF00005 ABC transporter ShL2_RS06335 PF00950 ABC 3 transport family ShL2_RS06340 PF01475 Ferric uptake regulator family ShL2_RS06345 PF00872 Transposase, Mutator family ShL2_RS06350 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ShL2_RS06350 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ShL2_RS06355 PF03717 Penicillin-binding Protein dimerisation domain ShL2_RS06355 PF00905 Penicillin binding protein transpeptidase domain ShL2_RS06360 PF00471 Ribosomal protein L33 ShL2_RS06365 PF01812 5-formyltetrahydrofolate cyclo-ligase family ShL2_RS06375 PF06014 Bacterial protein of unknown function (DUF910) ShL2_RS06380 PF00480 ROK family ShL2_RS06385 PF01910 Thiamine-binding protein ShL2_RS06390 PF00753 Metallo-beta-lactamase superfamily ShL2_RS06395 PF00437 Type II/IV secretion system protein ShL2_RS06400 PF00482 Type II secretion system (T2SS), protein F ShL2_RS06405 PF07963 Prokaryotic N-terminal methylation motif ShL2_RS06425 PF01202 Shikimate kinase ShL2_RS06430 PF01571 Aminomethyltransferase folate-binding domain ShL2_RS06430 PF08669 Glycine cleavage T-protein C-terminal barrel domain ShL2_RS06435 PF02347 Glycine cleavage system P-protein ShL2_RS06440 PF00266 Aminotransferase class-V ShL2_RS06450 PF03099 Biotin/lipoate A/B protein ligase family ShL2_RS06465 PF00557 Metallopeptidase family M24 ShL2_RS06465 PF01321 Creatinase/Prolidase N-terminal domain ShL2_RS06470 PF01132 Elongation factor P (EF-P) OB domain ShL2_RS06470 PF08207 Elongation factor P (EF-P) KOW-like domain ShL2_RS06470 PF09285 Elongation factor P, C-terminal ShL2_RS06475 PF00364 Biotin-requiring enzyme ShL2_RS06480 PF02785 Biotin carboxylase C-terminal domain ShL2_RS06480 PF00289 Biotin carboxylase, N-terminal domain ShL2_RS06480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ShL2_RS06485 PF03780 Asp23 family, cell envelope-related function ShL2_RS06490 PF01029 NusB family ShL2_RS06495 PF02601 Exonuclease VII, large subunit ShL2_RS06495 PF13742 OB-fold nucleic acid binding domain ShL2_RS06500 PF02609 Exonuclease VII small subunit ShL2_RS06510 PF02863 Arginine repressor, C-terminal domain ShL2_RS06510 PF01316 Arginine repressor, DNA binding domain ShL2_RS06515 PF13476 AAA domain ShL2_RS06520 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS06520 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ShL2_RS06525 PF00676 Dehydrogenase E1 component ShL2_RS06530 PF02779 Transketolase, pyrimidine binding domain ShL2_RS06530 PF02780 Transketolase, C-terminal domain ShL2_RS06535 PF02817 e3 binding domain ShL2_RS06535 PF00364 Biotin-requiring enzyme ShL2_RS06535 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ShL2_RS06540 PF06491 Disulphide isomerase ShL2_RS06545 PF06081 Aromatic acid exporter family member 1 ShL2_RS06545 PF11728 Putative aromatic acid exporter C-terminal domain ShL2_RS06555 PF01546 Peptidase family M20/M25/M40 ShL2_RS06555 PF07687 Peptidase dimerisation domain ShL2_RS06560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ShL2_RS06560 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ShL2_RS06565 PF00356 Bacterial regulatory proteins, lacI family ShL2_RS06570 PF16657 Maltogenic Amylase, C-terminal domain ShL2_RS06570 PF00128 Alpha amylase, catalytic domain ShL2_RS06580 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ShL2_RS06580 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ShL2_RS06585 PF12706 Beta-lactamase superfamily domain ShL2_RS06590 PF03807 NADP oxidoreductase coenzyme F420-dependent ShL2_RS06590 PF14748 Pyrroline-5-carboxylate reductase dimerisation ShL2_RS06595 PF00186 Dihydrofolate reductase ShL2_RS06610 PF00106 short chain dehydrogenase ShL2_RS06620 PF00248 Aldo/keto reductase family ShL2_RS06625 PF00293 NUDIX domain ShL2_RS06630 PF01475 Ferric uptake regulator family ShL2_RS06635 PF00589 Phage integrase family ShL2_RS06635 PF02899 Phage integrase, N-terminal SAM-like domain ShL2_RS06645 PF02616 Segregation and condensation protein ScpA ShL2_RS06650 PF04079 Segregation and condensation complex subunit ScpB ShL2_RS06655 PF00849 RNA pseudouridylate synthase ShL2_RS06655 PF01479 S4 domain ShL2_RS06660 PF00486 Transcriptional regulatory protein, C terminal ShL2_RS06660 PF00072 Response regulator receiver domain ShL2_RS06665 PF18698 Histidine kinase sensor domain ShL2_RS06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS06665 PF00512 His Kinase A (phospho-acceptor) domain ShL2_RS06665 PF00672 HAMP domain ShL2_RS06670 PF12822 ECF transporter, substrate-specific component ShL2_RS06685 PF00271 Helicase conserved C-terminal domain ShL2_RS06685 PF00270 DEAD/DEAH box helicase ShL2_RS06690 PF01476 LysM domain ShL2_RS06710 PF17763 Glutaminase/Asparaginase C-terminal domain ShL2_RS06710 PF00710 Asparaginase, N-terminal ShL2_RS06715 PF02224 Cytidylate kinase ShL2_RS06720 PF00575 S1 RNA binding domain ShL2_RS06725 PF01926 50S ribosome-binding GTPase ShL2_RS06725 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ShL2_RS06730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ShL2_RS06730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ShL2_RS06735 PF00216 Bacterial DNA-binding protein ShL2_RS06750 PF01209 ubiE/COQ5 methyltransferase family ShL2_RS06760 PF00334 Nucleoside diphosphate kinase ShL2_RS06765 PF01264 Chorismate synthase ShL2_RS06770 PF01761 3-dehydroquinate synthase ShL2_RS06775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ShL2_RS06785 PF08858 IDEAL domain ShL2_RS06785 PF08864 UPF0302 domain ShL2_RS06790 PF07187 Protein of unknown function (DUF1405) ShL2_RS06795 PF04298 Putative neutral zinc metallopeptidase ShL2_RS06800 PF03819 MazG nucleotide pyrophosphohydrolase domain ShL2_RS06805 PF13439 Glycosyltransferase Family 4 ShL2_RS06805 PF00534 Glycosyl transferases group 1 ShL2_RS06810 PF01743 Poly A polymerase head domain ShL2_RS06810 PF12627 Probable RNA and SrmB- binding site of polymerase A ShL2_RS06810 PF13735 tRNA nucleotidyltransferase domain 2 putative ShL2_RS06815 PF03099 Biotin/lipoate A/B protein ligase family ShL2_RS06815 PF02237 Biotin protein ligase C terminal domain ShL2_RS06815 PF08279 HTH domain ShL2_RS06820 PF04851 Type III restriction enzyme, res subunit ShL2_RS06820 PF13307 Helicase C-terminal domain ShL2_RS06820 PF00929 Exonuclease ShL2_RS06825 PF01336 OB-fold nucleic acid binding domain ShL2_RS06825 PF00152 tRNA synthetases class II (D, K and N) ShL2_RS06830 PF07261 Replication initiation and membrane attachment ShL2_RS06835 PF10576 Iron-sulfur binding domain of endonuclease III ShL2_RS06835 PF00633 Helix-hairpin-helix motif ShL2_RS06835 PF00730 HhH-GPD superfamily base excision DNA repair protein ShL2_RS06845 PF00905 Penicillin binding protein transpeptidase domain ShL2_RS06845 PF00912 Transglycosylase ShL2_RS06850 PF03838 Recombination protein U ShL2_RS06860 PF06908 YspA SLOG family ShL2_RS06865 PF05103 DivIVA protein ShL2_RS06870 PF02926 THUMP domain ShL2_RS06870 PF01170 Putative RNA methylase family UPF0020 ShL2_RS06885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ShL2_RS06885 PF01367 5'-3' exonuclease, C-terminal SAM fold ShL2_RS06890 PF01468 GA module ShL2_RS06890 PF07564 Domain of Unknown Function (DUF1542) ShL2_RS06890 PF04650 YSIRK type signal peptide ShL2_RS06900 PF01468 GA module ShL2_RS06900 PF07564 Domain of Unknown Function (DUF1542) ShL2_RS06900 PF04650 YSIRK type signal peptide ShL2_RS06915 PF02592 Putative vitamin uptake transporter ShL2_RS06920 PF13769 Virulence factor ShL2_RS06920 PF08712 Scaffold protein Nfu/NifU N terminal ShL2_RS06925 PF13769 Virulence factor ShL2_RS06925 PF08712 Scaffold protein Nfu/NifU N terminal ShL2_RS06935 PF00303 Thymidylate synthase ShL2_RS06940 PF00186 Dihydrofolate reductase ShL2_RS06945 PF02645 Uncharacterised protein, DegV family COG1307 ShL2_RS06950 PF01625 Peptide methionine sulfoxide reductase ShL2_RS06955 PF01641 SelR domain ShL2_RS06960 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ShL2_RS06965 PF06855 YozE SAM-like fold ShL2_RS06970 PF03572 Peptidase family S41 ShL2_RS06970 PF17820 PDZ domain ShL2_RS06970 PF01471 Putative peptidoglycan binding domain ShL2_RS06980 PF03033 Glycosyltransferase family 28 N-terminal domain ShL2_RS06980 PF04101 Glycosyltransferase family 28 C-terminal domain ShL2_RS06985 PF01569 PAP2 superfamily ShL2_RS06990 PF00072 Response regulator receiver domain ShL2_RS06990 PF00486 Transcriptional regulatory protein, C terminal ShL2_RS06995 PF18719 ArlS sensor domain ShL2_RS06995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS06995 PF00512 His Kinase A (phospho-acceptor) domain ShL2_RS07000 PF02779 Transketolase, pyrimidine binding domain ShL2_RS07000 PF16870 2-oxoglutarate dehydrogenase C-terminal ShL2_RS07000 PF00676 Dehydrogenase E1 component ShL2_RS07005 PF00364 Biotin-requiring enzyme ShL2_RS07005 PF02817 e3 binding domain ShL2_RS07005 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ShL2_RS07025 PF08406 CbbQ/NirQ/NorQ C-terminal ShL2_RS07025 PF07728 AAA domain (dynein-related subfamily) ShL2_RS07035 PF05525 Branched-chain amino acid transport protein ShL2_RS07040 PF05816 Toxic anion resistance protein (TelA) ShL2_RS07050 PF00708 Acylphosphatase ShL2_RS07060 PF00313 'Cold-shock' DNA-binding domain ShL2_RS07070 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ShL2_RS07070 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ShL2_RS07075 PF01168 Alanine racemase, N-terminal domain ShL2_RS07075 PF00842 Alanine racemase, C-terminal domain ShL2_RS07080 PF01546 Peptidase family M20/M25/M40 ShL2_RS07085 PF00132 Bacterial transferase hexapeptide (six repeats) ShL2_RS07085 PF14602 Hexapeptide repeat of succinyl-transferase ShL2_RS07085 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ShL2_RS07090 PF01113 Dihydrodipicolinate reductase, N-terminus ShL2_RS07090 PF05173 Dihydrodipicolinate reductase, C-terminus ShL2_RS07095 PF00701 Dihydrodipicolinate synthetase family ShL2_RS07100 PF02774 Semialdehyde dehydrogenase, dimerisation domain ShL2_RS07100 PF01118 Semialdehyde dehydrogenase, NAD binding domain ShL2_RS07105 PF13840 ACT domain ShL2_RS07105 PF00696 Amino acid kinase family ShL2_RS07110 PF00005 ABC transporter ShL2_RS07110 PF12848 ABC transporter ShL2_RS07115 PF13509 S1 domain ShL2_RS07115 PF17783 CvfB-like winged helix domain ShL2_RS07120 PF12849 PBP superfamily domain ShL2_RS07125 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS07130 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS07135 PF00005 ABC transporter ShL2_RS07140 PF01895 PhoU domain ShL2_RS07145 PF01432 Peptidase family M3 ShL2_RS07145 PF08439 Oligopeptidase F ShL2_RS07155 PF01497 Periplasmic binding protein ShL2_RS07170 PF02388 FemAB family ShL2_RS07180 PF00290 Tryptophan synthase alpha chain ShL2_RS07185 PF00291 Pyridoxal-phosphate dependent enzyme ShL2_RS07190 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ShL2_RS07195 PF00218 Indole-3-glycerol phosphate synthase ShL2_RS07200 PF00591 Glycosyl transferase family, a/b domain ShL2_RS07205 PF00117 Glutamine amidotransferase class-I ShL2_RS07210 PF04715 Anthranilate synthase component I, N terminal region ShL2_RS07210 PF00425 chorismate binding enzyme ShL2_RS07215 PF05343 M42 glutamyl aminopeptidase ShL2_RS07220 PF02153 Prephenate dehydrogenase ShL2_RS07225 PF00817 impB/mucB/samB family ShL2_RS07225 PF11798 IMS family HHH motif ShL2_RS07225 PF11799 impB/mucB/samB family C-terminal domain ShL2_RS07230 PF01361 Tautomerase enzyme ShL2_RS07235 PF03816 Cell envelope-related transcriptional attenuator domain ShL2_RS07245 PF03706 Lysylphosphatidylglycerol synthase TM region ShL2_RS07245 PF09924 Uncharacterised conserved protein (DUF2156) ShL2_RS07250 PF01594 AI-2E family transporter ShL2_RS07255 PF03123 CAT RNA binding domain ShL2_RS07255 PF00874 PRD domain ShL2_RS07260 PF01235 Sodium:alanine symporter family ShL2_RS07265 PF03989 DNA gyrase C-terminal domain, beta-propeller ShL2_RS07265 PF00521 DNA gyrase/topoisomerase IV, subunit A ShL2_RS07270 PF00986 DNA gyrase B subunit, carboxyl terminus ShL2_RS07270 PF01751 Toprim domain ShL2_RS07270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS07270 PF00204 DNA gyrase B ShL2_RS07275 PF02660 Glycerol-3-phosphate acyltransferase ShL2_RS07285 PF03061 Thioesterase superfamily ShL2_RS07290 PF00694 Aconitase C-terminal domain ShL2_RS07290 PF00330 Aconitase family (aconitate hydratase) ShL2_RS07295 PF02028 BCCT, betaine/carnitine/choline family transporter ShL2_RS07300 PF01741 Large-conductance mechanosensitive channel, MscL ShL2_RS07305 PF13476 AAA domain ShL2_RS07310 PF00149 Calcineurin-like phosphoesterase ShL2_RS07315 PF07301 Protein of unknown function (DUF1453) ShL2_RS07325 PF02779 Transketolase, pyrimidine binding domain ShL2_RS07325 PF00456 Transketolase, thiamine diphosphate binding domain ShL2_RS07325 PF02780 Transketolase, C-terminal domain ShL2_RS07330 PF05979 Bacterial protein of unknown function (DUF896) ShL2_RS07340 PF00717 Peptidase S24-like ShL2_RS07340 PF01726 LexA DNA binding domain ShL2_RS07345 PF14504 CAP-associated N-terminal ShL2_RS07345 PF00188 Cysteine-rich secretory protein family ShL2_RS07350 PF00478 IMP dehydrogenase / GMP reductase domain ShL2_RS07355 PF00253 Ribosomal protein S14p/S29e ShL2_RS07360 PF00471 Ribosomal protein L33 ShL2_RS07365 PF06628 Catalase-related immune-responsive ShL2_RS07365 PF00199 Catalase ShL2_RS07370 PF00324 Amino acid permease ShL2_RS07390 PF00291 Pyridoxal-phosphate dependent enzyme ShL2_RS07395 PF03447 Homoserine dehydrogenase, NAD binding domain ShL2_RS07395 PF01842 ACT domain ShL2_RS07395 PF00742 Homoserine dehydrogenase ShL2_RS07400 PF13840 ACT domain ShL2_RS07400 PF00696 Amino acid kinase family ShL2_RS07415 PF00565 Staphylococcal nuclease homologue ShL2_RS07430 PF00072 Response regulator receiver domain ShL2_RS07430 PF00196 Bacterial regulatory proteins, luxR family ShL2_RS07435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS07435 PF07730 Histidine kinase ShL2_RS07445 PF00005 ABC transporter ShL2_RS07520 PF05105 Bacteriophage holin family ShL2_RS07615 PF00574 Clp protease ShL2_RS07705 PF01695 IstB-like ATP binding protein ShL2_RS07730 PF00436 Single-strand binding protein family ShL2_RS07790 PF03951 Glutamine synthetase, beta-Grasp domain ShL2_RS07790 PF00120 Glutamine synthetase, catalytic domain ShL2_RS07795 PF13411 MerR HTH family regulatory protein ShL2_RS07800 PF06838 Methionine gamma-lyase ShL2_RS07805 PF01926 50S ribosome-binding GTPase ShL2_RS07805 PF13167 GTP-binding GTPase N-terminal ShL2_RS07805 PF16360 GTP-binding GTPase Middle Region ShL2_RS07810 PF00255 Glutathione peroxidase ShL2_RS07815 PF17209 Hfq protein ShL2_RS07830 PF01266 FAD dependent oxidoreductase ShL2_RS07830 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ShL2_RS07835 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ShL2_RS07835 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ShL2_RS07840 PF00230 Major intrinsic protein ShL2_RS07850 PF01119 DNA mismatch repair protein, C-terminal domain ShL2_RS07850 PF08676 MutL C terminal dimerisation domain ShL2_RS07855 PF05190 MutS family domain IV ShL2_RS07855 PF05192 MutS domain III ShL2_RS07855 PF01624 MutS domain I ShL2_RS07855 PF05188 MutS domain II ShL2_RS07855 PF00488 MutS domain V ShL2_RS07865 PF06133 Control of competence regulator ComK, YlbF/YmcA ShL2_RS07870 PF04055 Radical SAM superfamily ShL2_RS07870 PF00919 Uncharacterized protein family UPF0004 ShL2_RS07870 PF01938 TRAM domain ShL2_RS07880 PF05908 Poly-gamma-glutamate hydrolase ShL2_RS07885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ShL2_RS07890 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II ShL2_RS07890 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg ShL2_RS07890 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase ShL2_RS07895 PF13277 YmdB-like protein ShL2_RS07905 PF01966 HD domain ShL2_RS07905 PF12072 Domain of unknown function (DUF3552) ShL2_RS07905 PF00013 KH domain ShL2_RS07910 PF00872 Transposase, Mutator family ShL2_RS07915 PF01636 Phosphotransferase enzyme family ShL2_RS07920 PF00583 Acetyltransferase (GNAT) family ShL2_RS07925 PF00872 Transposase, Mutator family ShL2_RS07930 PF00154 recA bacterial DNA recombination protein ShL2_RS07935 PF00994 Probable molybdopterin binding domain ShL2_RS07935 PF02464 Competence-damaged protein ShL2_RS07935 PF18146 Damage-inducible protein CinA KH domain ShL2_RS07940 PF01066 CDP-alcohol phosphatidyltransferase ShL2_RS07950 PF11868 Protein of unknown function (DUF3388) ShL2_RS07960 PF05193 Peptidase M16 inactive domain ShL2_RS07960 PF00675 Insulinase (Peptidase family M16) ShL2_RS07965 PF05193 Peptidase M16 inactive domain ShL2_RS07970 PF00392 Bacterial regulatory proteins, gntR family ShL2_RS07970 PF07702 UTRA domain ShL2_RS07975 PF01580 FtsK/SpoIIIE family ShL2_RS07975 PF09397 Ftsk gamma domain ShL2_RS07975 PF17854 FtsK alpha domain ShL2_RS07980 PF17770 Ribonuclease J C-terminal domain ShL2_RS07980 PF00753 Metallo-beta-lactamase superfamily ShL2_RS07980 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ShL2_RS07985 PF03725 3' exoribonuclease family, domain 2 ShL2_RS07985 PF01138 3' exoribonuclease family, domain 1 ShL2_RS07985 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ShL2_RS07985 PF00575 S1 RNA binding domain ShL2_RS07985 PF00013 KH domain ShL2_RS07990 PF00312 Ribosomal protein S15 ShL2_RS07995 PF01687 Riboflavin kinase ShL2_RS07995 PF06574 FAD synthetase ShL2_RS08000 PF16198 tRNA pseudouridylate synthase B C-terminal domain ShL2_RS08000 PF01509 TruB family pseudouridylate synthase (N terminal domain) ShL2_RS08005 PF02033 Ribosome-binding factor A ShL2_RS08010 PF04760 Translation initiation factor IF-2, N-terminal region ShL2_RS08010 PF00009 Elongation factor Tu GTP binding domain ShL2_RS08010 PF11987 Translation-initiation factor 2 ShL2_RS08020 PF04296 Protein of unknown function (DUF448) ShL2_RS08025 PF08529 NusA N-terminal domain ShL2_RS08025 PF13184 NusA-like KH domain ShL2_RS08025 PF00575 S1 RNA binding domain ShL2_RS08030 PF02576 RimP N-terminal domain ShL2_RS08030 PF17384 RimP C-terminal SH3 domain ShL2_RS08035 PF07733 Bacterial DNA polymerase III alpha NTPase domain ShL2_RS08035 PF00929 Exonuclease ShL2_RS08035 PF02811 PHP domain ShL2_RS08035 PF11490 DNA polymerase III polC-type N-terminus II ShL2_RS08035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ShL2_RS08035 PF14579 Helix-hairpin-helix motif ShL2_RS08035 PF14480 DNA polymerase III polC-type N-terminus I ShL2_RS08040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ShL2_RS08040 PF03129 Anticodon binding domain ShL2_RS08040 PF04073 Aminoacyl-tRNA editing domain ShL2_RS08045 PF02163 Peptidase family M50 ShL2_RS08045 PF13180 PDZ domain ShL2_RS08055 PF01255 Putative undecaprenyl diphosphate synthase ShL2_RS08065 PF00696 Amino acid kinase family ShL2_RS08070 PF00889 Elongation factor TS ShL2_RS08075 PF00318 Ribosomal protein S2 ShL2_RS08080 PF06018 CodY GAF-like domain ShL2_RS08080 PF08222 CodY helix-turn-helix domain ShL2_RS08085 PF10431 C-terminal, D2-small domain, of ClpB protein ShL2_RS08085 PF07724 AAA domain (Cdc48 subfamily) ShL2_RS08090 PF00227 Proteasome subunit ShL2_RS08095 PF00589 Phage integrase family ShL2_RS08095 PF02899 Phage integrase, N-terminal SAM-like domain ShL2_RS08100 PF01134 Glucose inhibited division protein A ShL2_RS08105 PF01396 Topoisomerase DNA binding C4 zinc finger ShL2_RS08105 PF01751 Toprim domain ShL2_RS08105 PF01131 DNA topoisomerase ShL2_RS08110 PF02481 DNA recombination-mediator protein A ShL2_RS08115 PF02388 FemAB family ShL2_RS08120 PF02629 CoA binding domain ShL2_RS08120 PF00549 CoA-ligase ShL2_RS08125 PF00549 CoA-ligase ShL2_RS08125 PF08442 ATP-grasp domain ShL2_RS08130 PF01351 Ribonuclease HII ShL2_RS08135 PF01926 50S ribosome-binding GTPase ShL2_RS08145 PF01245 Ribosomal protein L19 ShL2_RS08150 PF01746 tRNA (Guanine-1)-methyltransferase ShL2_RS08155 PF01782 RimM N-terminal domain ShL2_RS08155 PF05239 PRC-barrel domain ShL2_RS08160 PF00886 Ribosomal protein S16 ShL2_RS08165 PF00448 SRP54-type protein, GTPase domain ShL2_RS08165 PF02881 SRP54-type protein, helical bundle domain ShL2_RS08165 PF02978 Signal peptide binding domain ShL2_RS08170 PF04297 Putative helix-turn-helix protein, YlxM / p13 like ShL2_RS08175 PF02881 SRP54-type protein, helical bundle domain ShL2_RS08175 PF00448 SRP54-type protein, GTPase domain ShL2_RS08180 PF06470 SMC proteins Flexible Hinge Domain ShL2_RS08180 PF02463 RecF/RecN/SMC N terminal domain ShL2_RS08185 PF00035 Double-stranded RNA binding motif ShL2_RS08185 PF14622 Ribonuclease-III-like ShL2_RS08190 PF00550 Phosphopantetheine attachment site ShL2_RS08200 PF00698 Acyl transferase domain ShL2_RS08205 PF02504 Fatty acid synthesis protein ShL2_RS08210 PF01575 MaoC like domain ShL2_RS08215 PF00270 DEAD/DEAH box helicase ShL2_RS08215 PF00271 Helicase conserved C-terminal domain ShL2_RS08215 PF17191 RecG wedge domain ShL2_RS08220 PF00565 Staphylococcal nuclease homologue ShL2_RS08225 PF13684 Dihydroxyacetone kinase family ShL2_RS08225 PF02734 DAK2 domain ShL2_RS08230 PF03780 Asp23 family, cell envelope-related function ShL2_RS08235 PF00830 Ribosomal L28 family ShL2_RS08245 PF00834 Ribulose-phosphate 3 epimerase family ShL2_RS08250 PF16745 RsgA N-terminal domain ShL2_RS08250 PF03193 RsgA GTPase ShL2_RS08255 PF03793 PASTA domain ShL2_RS08255 PF00069 Protein kinase domain ShL2_RS08265 PF04055 Radical SAM superfamily ShL2_RS08270 PF01189 16S rRNA methyltransferase RsmB/F ShL2_RS08270 PF01029 NusB family ShL2_RS08275 PF02911 Formyl transferase, C-terminal domain ShL2_RS08275 PF00551 Formyl transferase ShL2_RS08290 PF00271 Helicase conserved C-terminal domain ShL2_RS08290 PF18074 Primosomal protein N C-terminal domain ShL2_RS08290 PF17764 3′ DNA-binding domain (3′BD) ShL2_RS08290 PF04851 Type III restriction enzyme, res subunit ShL2_RS08290 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ShL2_RS08295 PF04127 DNA / pantothenate metabolism flavoprotein ShL2_RS08295 PF02441 Flavoprotein ShL2_RS08300 PF01192 RNA polymerase Rpb6 ShL2_RS08305 PF00625 Guanylate kinase ShL2_RS08310 PF05670 NFACT protein RNA binding domain ShL2_RS08325 PF00156 Phosphoribosyl transferase domain ShL2_RS08330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ShL2_RS08335 PF02142 MGS-like domain ShL2_RS08335 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ShL2_RS08335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ShL2_RS08340 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ShL2_RS08340 PF00117 Glutamine amidotransferase class-I ShL2_RS08345 PF01979 Amidohydrolase family ShL2_RS08350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ShL2_RS08350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ShL2_RS08355 PF00860 Permease family ShL2_RS08360 PF00156 Phosphoribosyl transferase domain ShL2_RS08365 PF01479 S4 domain ShL2_RS08365 PF00849 RNA pseudouridylate synthase ShL2_RS08370 PF01252 Signal peptidase (SPase) II ShL2_RS08375 PF05257 CHAP domain ShL2_RS08375 PF01476 LysM domain ShL2_RS08385 PF11066 Protein of unknown function (DUF2867) ShL2_RS08385 PF13460 NAD(P)H-binding ShL2_RS08390 PF08264 Anticodon-binding domain of tRNA ShL2_RS08390 PF06827 Zinc finger found in FPG and IleRS ShL2_RS08390 PF00133 tRNA synthetases class I (I, L, M and V) ShL2_RS08395 PF05103 DivIVA protein ShL2_RS08405 PF02325 YGGT family ShL2_RS08410 PF04472 Cell division protein SepF ShL2_RS08415 PF01168 Alanine racemase, N-terminal domain ShL2_RS08420 PF02578 Multi-copper polyphenol oxidoreductase laccase ShL2_RS08425 PF12327 FtsZ family, C-terminal domain ShL2_RS08425 PF00091 Tubulin/FtsZ family, GTPase domain ShL2_RS08430 PF02491 SHS2 domain inserted in FTSA ShL2_RS08435 PF03799 Cell division protein FtsQ ShL2_RS08435 PF08478 POTRA domain, FtsQ-type ShL2_RS08440 PF08245 Mur ligase middle domain ShL2_RS08440 PF02875 Mur ligase family, glutamate ligase domain ShL2_RS08445 PF00953 Glycosyl transferase family 4 ShL2_RS08450 PF03717 Penicillin-binding Protein dimerisation domain ShL2_RS08450 PF03793 PASTA domain ShL2_RS08450 PF00905 Penicillin binding protein transpeptidase domain ShL2_RS08455 PF04977 Septum formation initiator ShL2_RS08460 PF01795 MraW methylase family ShL2_RS08465 PF02381 MraZ protein, putative antitoxin-like ShL2_RS08470 PF10079 Bacillithiol biosynthesis BshC ShL2_RS08480 PF13419 Haloacid dehalogenase-like hydrolase ShL2_RS08485 PF05480 Staphylococcus haemolytic protein ShL2_RS08490 PF05480 Staphylococcus haemolytic protein ShL2_RS08495 PF05480 Staphylococcus haemolytic protein ShL2_RS08500 PF05480 Staphylococcus haemolytic protein ShL2_RS08505 PF05480 Staphylococcus haemolytic protein ShL2_RS08515 PF12850 Calcineurin-like phosphoesterase superfamily domain ShL2_RS08520 PF01725 Ham1 family ShL2_RS08525 PF01177 Asp/Glu/Hydantoin racemase ShL2_RS08530 PF13085 2Fe-2S iron-sulfur cluster binding domain ShL2_RS08530 PF13183 4Fe-4S dicluster domain ShL2_RS08535 PF00890 FAD binding domain ShL2_RS08535 PF02910 Fumarate reductase flavoprotein C-term ShL2_RS08540 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ShL2_RS08555 PF00488 MutS domain V ShL2_RS08555 PF01713 Smr domain ShL2_RS08560 PF02811 PHP domain ShL2_RS08560 PF14716 Helix-hairpin-helix domain ShL2_RS08560 PF14791 DNA polymerase beta thumb ShL2_RS08570 PF05164 Cell division protein ZapA ShL2_RS08575 PF01351 Ribonuclease HII ShL2_RS08575 PF11858 Domain of unknown function (DUF3378) ShL2_RS08580 PF03484 tRNA synthetase B5 domain ShL2_RS08580 PF03147 Ferredoxin-fold anticodon binding domain ShL2_RS08580 PF03483 B3/4 domain ShL2_RS08580 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ShL2_RS08580 PF01588 Putative tRNA binding domain ShL2_RS08585 PF01409 tRNA synthetases class II core domain (F) ShL2_RS08585 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ShL2_RS08590 PF00588 SpoU rRNA Methylase family ShL2_RS08590 PF08032 RNA 2'-O ribose methyltransferase substrate binding ShL2_RS08595 PF01783 Ribosomal L32p protein family ShL2_RS08605 PF05636 HIGH Nucleotidyl Transferase ShL2_RS08610 PF01467 Cytidylyltransferase-like ShL2_RS08625 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) ShL2_RS08630 PF03009 Glycerophosphoryl diester phosphodiesterase family ShL2_RS08635 PF06133 Control of competence regulator ComK, YlbF/YmcA ShL2_RS08640 PF00188 Cysteine-rich secretory protein family ShL2_RS08640 PF14504 CAP-associated N-terminal ShL2_RS08650 PF01040 UbiA prenyltransferase family ShL2_RS08655 PF02628 Cytochrome oxidase assembly protein ShL2_RS08665 PF01098 Cell cycle protein ShL2_RS08670 PF07408 Protein of unknown function (DUF1507) ShL2_RS08680 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) ShL2_RS08685 PF14492 Elongation Factor G, domain II ShL2_RS08685 PF03144 Elongation factor Tu domain 2 ShL2_RS08685 PF00009 Elongation factor Tu GTP binding domain ShL2_RS08685 PF00679 Elongation factor G C-terminus ShL2_RS08695 PF00459 Inositol monophosphatase family ShL2_RS08700 PF06335 Protein of unknown function (DUF1054) ShL2_RS08705 PF01566 Natural resistance-associated macrophage protein ShL2_RS08720 PF13416 Bacterial extracellular solute-binding protein ShL2_RS08725 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS08730 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS08735 PF08402 TOBE domain ShL2_RS08735 PF00005 ABC transporter ShL2_RS08740 PF09856 Predicted transcriptional regulator (DUF2083) ShL2_RS08740 PF06114 IrrE N-terminal-like domain ShL2_RS08740 PF01381 Helix-turn-helix ShL2_RS08745 PF05256 Uncharacterised protein family (UPF0223) ShL2_RS08750 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS08750 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ShL2_RS08755 PF02817 e3 binding domain ShL2_RS08755 PF00364 Biotin-requiring enzyme ShL2_RS08755 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ShL2_RS08760 PF02780 Transketolase, C-terminal domain ShL2_RS08760 PF02779 Transketolase, pyrimidine binding domain ShL2_RS08765 PF00676 Dehydrogenase E1 component ShL2_RS08775 PF01327 Polypeptide deformylase ShL2_RS08780 PF07288 Protein of unknown function (DUF1447) ShL2_RS08785 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ShL2_RS08785 PF00753 Metallo-beta-lactamase superfamily ShL2_RS08785 PF17770 Ribonuclease J C-terminal domain ShL2_RS08795 PF04304 Protein of unknown function (DUF454) ShL2_RS08800 PF02254 TrkA-N domain ShL2_RS08800 PF02080 TrkA-C domain ShL2_RS08805 PF02322 Cytochrome bd terminal oxidase subunit II ShL2_RS08830 PF05524 PEP-utilising enzyme, N-terminal ShL2_RS08830 PF02896 PEP-utilising enzyme, TIM barrel domain ShL2_RS08830 PF00391 PEP-utilising enzyme, mobile domain ShL2_RS08835 PF00381 PTS HPr component phosphorylation site ShL2_RS08845 PF17785 PUA-like domain ShL2_RS08845 PF10672 S-adenosylmethionine-dependent methyltransferase ShL2_RS08860 PF00005 ABC transporter ShL2_RS08865 PF02361 Cobalt transport protein ShL2_RS08870 PF02844 Phosphoribosylglycinamide synthetase, N domain ShL2_RS08870 PF02843 Phosphoribosylglycinamide synthetase, C domain ShL2_RS08870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ShL2_RS08875 PF02142 MGS-like domain ShL2_RS08875 PF01808 AICARFT/IMPCHase bienzyme ShL2_RS08880 PF00551 Formyl transferase ShL2_RS08885 PF02769 AIR synthase related protein, C-terminal domain ShL2_RS08885 PF00586 AIR synthase related protein, N-terminal domain ShL2_RS08890 PF00156 Phosphoribosyl transferase domain ShL2_RS08890 PF13537 Glutamine amidotransferase domain ShL2_RS08895 PF00586 AIR synthase related protein, N-terminal domain ShL2_RS08895 PF02769 AIR synthase related protein, C-terminal domain ShL2_RS08895 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ShL2_RS08905 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ShL2_RS08910 PF01259 SAICAR synthetase ShL2_RS08915 PF02222 ATP-grasp domain ShL2_RS08915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ShL2_RS08915 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ShL2_RS08920 PF00731 AIR carboxylase ShL2_RS08925 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ShL2_RS08925 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ShL2_RS08930 PF00970 Oxidoreductase FAD-binding domain ShL2_RS08930 PF00042 Globin ShL2_RS08930 PF00175 Oxidoreductase NAD-binding domain ShL2_RS08940 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ShL2_RS08940 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ShL2_RS08945 PF00115 Cytochrome C and Quinol oxidase polypeptide I ShL2_RS08950 PF00510 Cytochrome c oxidase subunit III ShL2_RS08955 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ShL2_RS08960 PF01156 Inosine-uridine preferring nucleoside hydrolase ShL2_RS08965 PF00144 Beta-lactamase ShL2_RS08970 PF03816 Cell envelope-related transcriptional attenuator domain ShL2_RS08975 PF10804 Protein of unknown function (DUF2538) ShL2_RS08980 PF13673 Acetyltransferase (GNAT) domain ShL2_RS08985 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ShL2_RS08985 PF13457 GW (Gly-Tryp) dipeptide domain ShL2_RS09000 PF01757 Acyltransferase family ShL2_RS09005 PF00155 Aminotransferase class I and II ShL2_RS09010 PF00378 Enoyl-CoA hydratase/isomerase ShL2_RS09015 PF12697 Alpha/beta hydrolase family ShL2_RS09020 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ShL2_RS09020 PF16582 Middle domain of thiamine pyrophosphate ShL2_RS09020 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ShL2_RS09025 PF00425 chorismate binding enzyme ShL2_RS09030 PF01040 UbiA prenyltransferase family ShL2_RS09080 PF03099 Biotin/lipoate A/B protein ligase family ShL2_RS09080 PF10437 Bacterial lipoate protein ligase C-terminus ShL2_RS09100 PF02386 Cation transport protein ShL2_RS09105 PF13180 PDZ domain ShL2_RS09110 PF03741 Integral membrane protein TerC family ShL2_RS09125 PF08245 Mur ligase middle domain ShL2_RS09125 PF02875 Mur ligase family, glutamate ligase domain ShL2_RS09125 PF01225 Mur ligase family, catalytic domain ShL2_RS09130 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase ShL2_RS09130 PF04101 Glycosyltransferase family 28 C-terminal domain ShL2_RS09135 PF07690 Major Facilitator Superfamily ShL2_RS09145 PF00756 Putative esterase ShL2_RS09150 PF01594 AI-2E family transporter ShL2_RS09160 PF02254 TrkA-N domain ShL2_RS09160 PF02080 TrkA-C domain ShL2_RS09160 PF00999 Sodium/hydrogen exchanger family ShL2_RS09165 PF03448 MgtE intracellular N domain ShL2_RS09165 PF01769 Divalent cation transporter ShL2_RS09165 PF00571 CBS domain ShL2_RS09170 PF00849 RNA pseudouridylate synthase ShL2_RS09175 PF01513 ATP-NAD kinase ShL2_RS09180 PF04607 Region found in RelA / SpoT proteins ShL2_RS09190 PF01928 CYTH domain ShL2_RS09195 PF01152 Bacterial-like globin ShL2_RS09205 PF01432 Peptidase family M3 ShL2_RS09205 PF08439 Oligopeptidase F ShL2_RS09215 PF05389 Negative regulator of genetic competence (MecA) ShL2_RS09220 PF03960 ArsC family ShL2_RS09225 PF00579 tRNA synthetases class I (W and Y) ShL2_RS09230 PF13610 DDE domain ShL2_RS09240 PF13610 DDE domain ShL2_RS09245 PF13683 Integrase core domain ShL2_RS09245 PF01610 Transposase ShL2_RS09250 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ShL2_RS09255 PF00005 ABC transporter ShL2_RS09255 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ShL2_RS09260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ShL2_RS09260 PF00005 ABC transporter ShL2_RS09265 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS09265 PF12911 N-terminal TM domain of oligopeptide transport permease C ShL2_RS09280 PF00109 Beta-ketoacyl synthase, N-terminal domain ShL2_RS09280 PF02801 Beta-ketoacyl synthase, C-terminal domain ShL2_RS09285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ShL2_RS09285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ShL2_RS09295 PF10431 C-terminal, D2-small domain, of ClpB protein ShL2_RS09295 PF02861 Clp amino terminal domain, pathogenicity island component ShL2_RS09295 PF17871 AAA lid domain ShL2_RS09295 PF07724 AAA domain (Cdc48 subfamily) ShL2_RS09295 PF00004 ATPase family associated with various cellular activities (AAA) ShL2_RS09300 PF01757 Acyltransferase family ShL2_RS09305 PF01883 Iron-sulfur cluster assembly protein ShL2_RS09315 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS09315 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ShL2_RS09325 PF01557 Fumarylacetoacetate (FAA) hydrolase family ShL2_RS09330 PF12705 PD-(D/E)XK nuclease superfamily ShL2_RS09330 PF00580 UvrD/REP helicase N-terminal domain ShL2_RS09330 PF13361 UvrD-like helicase C-terminal domain ShL2_RS09335 PF13361 UvrD-like helicase C-terminal domain ShL2_RS09335 PF12705 PD-(D/E)XK nuclease superfamily ShL2_RS09340 PF10502 Signal peptidase, peptidase S26 ShL2_RS09345 PF10502 Signal peptidase, peptidase S26 ShL2_RS09350 PF09335 SNARE associated Golgi protein ShL2_RS09355 PF00342 Phosphoglucose isomerase ShL2_RS09360 PF00764 Arginosuccinate synthase ShL2_RS09365 PF14698 Argininosuccinate lyase C-terminal ShL2_RS09365 PF00206 Lyase ShL2_RS09370 PF03009 Glycerophosphoryl diester phosphodiesterase family ShL2_RS09375 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ShL2_RS09375 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ShL2_RS09380 PF00202 Aminotransferase class-III ShL2_RS09385 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ShL2_RS09390 PF00575 S1 RNA binding domain ShL2_RS09395 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ShL2_RS09405 PF13244 Domain of unknown function (DUF4040) ShL2_RS09405 PF00361 Proton-conducting membrane transporter ShL2_RS09405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ShL2_RS09410 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ShL2_RS09415 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ShL2_RS09420 PF00361 Proton-conducting membrane transporter ShL2_RS09425 PF01899 Na+/H+ ion antiporter subunit ShL2_RS09430 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ShL2_RS09435 PF03334 Na+/H+ antiporter subunit ShL2_RS09445 PF03061 Thioesterase superfamily ShL2_RS09450 PF03553 Na+/H+ antiporter family ShL2_RS09450 PF13726 Na+-H+ antiporter family ShL2_RS09455 PF00883 Cytosol aminopeptidase family, catalytic domain ShL2_RS09455 PF02789 Cytosol aminopeptidase family, N-terminal domain ShL2_RS09460 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS09465 PF01521 Iron-sulphur cluster biosynthesis ShL2_RS09470 PF07293 Protein of unknown function (DUF1450) ShL2_RS09475 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS09480 PF07315 Protein of unknown function (DUF1462) ShL2_RS09485 PF01106 NifU-like domain ShL2_RS09495 PF04914 DltD protein ShL2_RS09500 PF00550 Phosphopantetheine attachment site ShL2_RS09505 PF03062 MBOAT, membrane-bound O-acyltransferase family ShL2_RS09520 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ShL2_RS09520 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ShL2_RS09525 PF13344 Haloacid dehalogenase-like hydrolase ShL2_RS09530 PF01934 Protein of unknown function DUF86 ShL2_RS09540 PF06265 Protein of unknown function (DUF1027) ShL2_RS09545 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ShL2_RS09545 PF04055 Radical SAM superfamily ShL2_RS09550 PF02872 5'-nucleotidase, C-terminal domain ShL2_RS09555 PF01925 Sulfite exporter TauE/SafE ShL2_RS09560 PF01904 Protein of unknown function DUF72 ShL2_RS09565 PF03060 Nitronate monooxygenase ShL2_RS09575 PF01458 Uncharacterized protein family (UPF0051) ShL2_RS09580 PF01592 NifU-like N terminal domain ShL2_RS09585 PF00266 Aminotransferase class-V ShL2_RS09590 PF01458 Uncharacterized protein family (UPF0051) ShL2_RS09595 PF00005 ABC transporter ShL2_RS09615 PF05532 CsbD-like ShL2_RS09625 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS09630 PF09383 NIL domain ShL2_RS09630 PF00005 ABC transporter ShL2_RS09640 PF01751 Toprim domain ShL2_RS09645 PF01597 Glycine cleavage H-protein ShL2_RS09650 PF03960 ArsC family ShL2_RS09655 PF00085 Thioredoxin ShL2_RS09670 PF02566 OsmC-like protein ShL2_RS09680 PF01810 LysE type translocator ShL2_RS09685 PF00300 Histidine phosphatase superfamily (branch 1) ShL2_RS09725 PF00583 Acetyltransferase (GNAT) family ShL2_RS09730 PF05908 Poly-gamma-glutamate hydrolase ShL2_RS09875 PF01668 SmpB protein ShL2_RS09880 PF00773 RNB domain ShL2_RS09880 PF08206 Ribonuclease B OB domain ShL2_RS09880 PF17876 Cold shock domain ShL2_RS09880 PF00575 S1 RNA binding domain ShL2_RS09885 PF12146 Serine aminopeptidase, S33 ShL2_RS09890 PF03840 Preprotein translocase SecG subunit ShL2_RS09900 PF00113 Enolase, C-terminal TIM barrel domain ShL2_RS09900 PF03952 Enolase, N-terminal domain ShL2_RS09905 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ShL2_RS09905 PF01676 Metalloenzyme superfamily ShL2_RS09910 PF00121 Triosephosphate isomerase ShL2_RS09915 PF00162 Phosphoglycerate kinase ShL2_RS09920 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ShL2_RS09920 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ShL2_RS09925 PF04198 Putative sugar-binding domain ShL2_RS09945 PF01370 NAD dependent epimerase/dehydratase family ShL2_RS09945 PF08338 Domain of unknown function (DUF1731) ShL2_RS09950 PF00574 Clp protease ShL2_RS09960 PF01933 Uncharacterised protein family UPF0052 ShL2_RS09965 PF03668 P-loop ATPase protein family ShL2_RS09970 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS09985 PF01790 Prolipoprotein diacylglyceryl transferase ShL2_RS09990 PF07475 HPr Serine kinase C-terminal domain ShL2_RS09990 PF02603 HPr Serine kinase N terminus ShL2_RS09995 PF00005 ABC transporter ShL2_RS09995 PF17760 UvrA interaction domain ShL2_RS09995 PF17755 UvrA DNA-binding domain ShL2_RS10000 PF02151 UvrB/uvrC motif ShL2_RS10000 PF12344 Ultra-violet resistance protein B ShL2_RS10000 PF17757 UvrB interaction domain ShL2_RS10000 PF00271 Helicase conserved C-terminal domain ShL2_RS10000 PF04851 Type III restriction enzyme, res subunit ShL2_RS10015 PF00106 short chain dehydrogenase ShL2_RS10020 PF01476 LysM domain ShL2_RS10020 PF05257 CHAP domain ShL2_RS10030 PF07517 SecA DEAD-like domain ShL2_RS10030 PF07516 SecA Wing and Scaffold domain ShL2_RS10030 PF01043 SecA preprotein cross-linking domain ShL2_RS10030 PF02810 SEC-C motif ShL2_RS10035 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ShL2_RS10035 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ShL2_RS10050 PF02645 Uncharacterised protein, DegV family COG1307 ShL2_RS10055 PF01205 Uncharacterized protein family UPF0029 ShL2_RS10055 PF09186 Domain of unknown function (DUF1949) ShL2_RS10060 PF00953 Glycosyl transferase family 4 ShL2_RS10065 PF00990 Diguanylate cyclase, GGDEF domain ShL2_RS10080 PF07687 Peptidase dimerisation domain ShL2_RS10080 PF01546 Peptidase family M20/M25/M40 ShL2_RS10085 PF02595 Glycerate kinase family ShL2_RS10105 PF01565 FAD binding domain ShL2_RS10105 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ShL2_RS10120 PF01497 Periplasmic binding protein ShL2_RS10125 PF00005 ABC transporter ShL2_RS10130 PF01032 FecCD transport family ShL2_RS10135 PF01032 FecCD transport family ShL2_RS10140 PF00268 Ribonucleotide reductase, small chain ShL2_RS10145 PF02867 Ribonucleotide reductase, barrel domain ShL2_RS10145 PF00317 Ribonucleotide reductase, all-alpha domain ShL2_RS10145 PF08343 Ribonucleotide reductase N-terminal ShL2_RS10150 PF07972 NrdI Flavodoxin like ShL2_RS10160 PF14489 QueF-like protein ShL2_RS10165 PF00854 POT family ShL2_RS10170 PF00781 Diacylglycerol kinase catalytic domain ShL2_RS10175 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) ShL2_RS10180 PF00155 Aminotransferase class I and II ShL2_RS10185 PF00854 POT family ShL2_RS10190 PF00528 Binding-protein-dependent transport system inner membrane component ShL2_RS10200 PF16124 RecQ zinc-binding ShL2_RS10200 PF00570 HRDC domain ShL2_RS10200 PF00271 Helicase conserved C-terminal domain ShL2_RS10200 PF00270 DEAD/DEAH box helicase ShL2_RS10200 PF09382 RQC domain ShL2_RS10210 PF02535 ZIP Zinc transporter ShL2_RS10215 PF00884 Sulfatase ShL2_RS10220 PF02626 Carboxyltransferase domain, subdomain A and B ShL2_RS10225 PF02682 Carboxyltransferase domain, subdomain C and D ShL2_RS10240 PF04715 Anthranilate synthase component I, N terminal region ShL2_RS10240 PF00425 chorismate binding enzyme ShL2_RS10245 PF02885 Glycosyl transferase family, helical bundle domain ShL2_RS10245 PF00117 Glutamine amidotransferase class-I ShL2_RS10245 PF00591 Glycosyl transferase family, a/b domain ShL2_RS10250 PF06508 Queuosine biosynthesis protein QueC ShL2_RS10255 PF01242 6-pyruvoyl tetrahydropterin synthase ShL2_RS10260 PF04055 Radical SAM superfamily ShL2_RS10270 PF00535 Glycosyl transferase family 2 ShL2_RS10280 PF00248 Aldo/keto reductase family ShL2_RS10285 PF03471 Transporter associated domain ShL2_RS10285 PF00571 CBS domain ShL2_RS10285 PF01595 Cyclin M transmembrane N-terminal domain ShL2_RS10290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ShL2_RS10290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ShL2_RS10295 PF00294 pfkB family carbohydrate kinase ShL2_RS10300 PF08220 DeoR-like helix-turn-helix domain ShL2_RS10300 PF00455 DeoR C terminal sensor domain ShL2_RS10305 PF04073 Aminoacyl-tRNA editing domain ShL2_RS10315 PF07690 Major Facilitator Superfamily ShL2_RS10335 PF03441 FAD binding domain of DNA photolyase ShL2_RS10335 PF00875 DNA photolyase ShL2_RS10340 PF00939 Sodium:sulfate symporter transmembrane region ShL2_RS10350 PF02492 CobW/HypB/UreG, nucleotide-binding domain ShL2_RS10350 PF07683 Cobalamin synthesis protein cobW C-terminal domain ShL2_RS10355 PF01047 MarR family ShL2_RS10360 PF00005 ABC transporter ShL2_RS10360 PF00664 ABC transporter transmembrane region ShL2_RS10365 PF00664 ABC transporter transmembrane region ShL2_RS10365 PF00005 ABC transporter ShL2_RS10370 PF02673 Bacitracin resistance protein BacA ShL2_RS10380 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ShL2_RS10385 PF03641 Possible lysine decarboxylase ShL2_RS10390 PF13302 Acetyltransferase (GNAT) domain ShL2_RS10405 PF00583 Acetyltransferase (GNAT) family ShL2_RS10415 PF04306 Protein of unknown function (DUF456) ShL2_RS10420 PF07690 Major Facilitator Superfamily ShL2_RS10425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ShL2_RS10425 PF03466 LysR substrate binding domain ShL2_RS10435 PF01717 Cobalamin-independent synthase, Catalytic domain ShL2_RS10445 PF01709 Transcriptional regulator ShL2_RS10455 PF12833 Helix-turn-helix domain ShL2_RS10465 PF01476 LysM domain ShL2_RS10465 PF05257 CHAP domain ShL2_RS10470 PF01384 Phosphate transporter family ShL2_RS10475 PF01865 Protein of unknown function DUF47 ShL2_RS10480 PF02687 FtsX-like permease family ShL2_RS10485 PF00005 ABC transporter ShL2_RS10490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ShL2_RS10495 PF00486 Transcriptional regulatory protein, C terminal ShL2_RS10495 PF00072 Response regulator receiver domain ShL2_RS10500 PF01370 NAD dependent epimerase/dehydratase family ShL2_RS10510 PF07859 alpha/beta hydrolase fold ShL2_RS10525 PF03610 PTS system fructose IIA component ShL2_RS10530 PF02734 DAK2 domain ShL2_RS10535 PF02733 Dak1 domain ShL2_RS10540 PF01032 FecCD transport family ShL2_RS10545 PF01032 FecCD transport family ShL2_RS10550 PF00005 ABC transporter ShL2_RS10555 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ShL2_RS10555 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ShL2_RS10560 PF01773 Na+ dependent nucleoside transporter N-terminus ShL2_RS10560 PF07662 Na+ dependent nucleoside transporter C-terminus ShL2_RS10575 PF00005 ABC transporter ShL2_RS10575 PF00664 ABC transporter transmembrane region ShL2_RS10580 PF00872 Transposase, Mutator family ShL2_RS10585 PF07943 Penicillin-binding protein 5, C-terminal domain ShL2_RS10585 PF00768 D-alanyl-D-alanine carboxypeptidase ShL2_RS10590 PF01467 Cytidylyltransferase-like ShL2_RS10595 PF00535 Glycosyl transferase family 2 ShL2_RS10600 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ShL2_RS10605 PF01061 ABC-2 type transporter ShL2_RS10610 PF00005 ABC transporter ShL2_RS10615 PF03808 Glycosyl transferase WecB/TagA/CpsF family ShL2_RS10630 PF02742 Iron dependent repressor, metal binding and dimerisation domain ShL2_RS10630 PF18357 Diphteria toxin repressor SH3 domain ShL2_RS10630 PF01325 Iron dependent repressor, N-terminal DNA binding domain ShL2_RS10635 PF00999 Sodium/hydrogen exchanger family ShL2_RS10640 PF01546 Peptidase family M20/M25/M40 ShL2_RS10640 PF07687 Peptidase dimerisation domain ShL2_RS10655 PF03334 Na+/H+ antiporter subunit ShL2_RS10660 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ShL2_RS10665 PF01899 Na+/H+ ion antiporter subunit ShL2_RS10670 PF00361 Proton-conducting membrane transporter ShL2_RS10675 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ShL2_RS10680 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ShL2_RS10685 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ShL2_RS10685 PF13244 Domain of unknown function (DUF4040) ShL2_RS10685 PF00361 Proton-conducting membrane transporter ShL2_RS10690 PF00589 Phage integrase family ShL2_RS10690 PF02899 Phage integrase, N-terminal SAM-like domain ShL2_RS10720 PF13683 Integrase core domain ShL2_RS10720 PF01610 Transposase ShL2_RS10725 PF00561 alpha/beta hydrolase fold ShL2_RS10745 PF13419 Haloacid dehalogenase-like hydrolase ShL2_RS10750 PF01032 FecCD transport family ShL2_RS10755 PF01497 Periplasmic binding protein ShL2_RS10770 PF00633 Helix-hairpin-helix motif ShL2_RS10770 PF10576 Iron-sulfur binding domain of endonuclease III ShL2_RS10770 PF00730 HhH-GPD superfamily base excision DNA repair protein ShL2_RS10775 PF05746 DALR anticodon binding domain ShL2_RS10775 PF00750 tRNA synthetases class I (R) ShL2_RS10775 PF03485 Arginyl tRNA synthetase N terminal domain ShL2_RS10810 PF00872 Transposase, Mutator family ShL2_RS10820 PF00005 ABC transporter ShL2_RS10825 PF00005 ABC transporter ShL2_RS10830 PF01636 Phosphotransferase enzyme family ShL2_RS10840 PF13977 BetI-type transcriptional repressor, C-terminal ShL2_RS10840 PF00440 Bacterial regulatory proteins, tetR family ShL2_RS10845 PF00239 Resolvase, N terminal domain ShL2_RS10845 PF02796 Helix-turn-helix domain of resolvase ShL2_RS10850 PF00171 Aldehyde dehydrogenase family ShL2_RS10855 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ShL2_RS10865 PF13610 DDE domain ShL2_RS10870 PF01719 Plasmid replication protein ShL2_RS10875 PF13610 DDE domain ShL2_RS10895 PF00583 Acetyltransferase (GNAT) family ShL2_RS10910 PF13610 DDE domain ShL2_RS10920 PF02796 Helix-turn-helix domain of resolvase ShL2_RS10920 PF00239 Resolvase, N terminal domain ShL2_RS10935 PF01381 Helix-turn-helix ShL2_RS10975 PF13610 DDE domain ShL2_RS10980 PF08741 YwhD family ShL2_RS10985 PF01966 HD domain ShL2_RS10995 PF03358 NADPH-dependent FMN reductase ShL2_RS11000 PF00248 Aldo/keto reductase family ShL2_RS11010 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS11010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ShL2_RS11015 PF00313 'Cold-shock' DNA-binding domain ShL2_RS11020 PF07293 Protein of unknown function (DUF1450) ShL2_RS11040 PF00288 GHMP kinases N terminal domain ShL2_RS11040 PF08544 GHMP kinases C terminal ShL2_RS11045 PF03099 Biotin/lipoate A/B protein ligase family ShL2_RS11050 PF01515 Phosphate acetyl/butaryl transferase ShL2_RS11055 PF06778 Chlorite dismutase ShL2_RS11060 PF06738 Putative threonine/serine exporter ShL2_RS11070 PF13520 Amino acid permease ShL2_RS11075 PF04241 Protein of unknown function (DUF423) ShL2_RS11085 PF03167 Uracil DNA glycosylase superfamily ShL2_RS11100 PF07690 Major Facilitator Superfamily ShL2_RS11115 PF02803 Thiolase, C-terminal domain ShL2_RS11115 PF00108 Thiolase, N-terminal domain ShL2_RS11120 PF13193 AMP-binding enzyme C-terminal domain ShL2_RS11120 PF00501 AMP-binding enzyme ShL2_RS11125 PF01380 SIS domain ShL2_RS11130 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ShL2_RS11145 PF02649 Type I GTP cyclohydrolase folE2 ShL2_RS11160 PF03358 NADPH-dependent FMN reductase ShL2_RS11170 PF14437 MafB19-like deaminase ShL2_RS11175 PF01712 Deoxynucleoside kinase ShL2_RS11180 PF01712 Deoxynucleoside kinase ShL2_RS11230 PF01063 Amino-transferase class IV ShL2_RS11235 PF01370 NAD dependent epimerase/dehydratase family ShL2_RS11240 PF02872 5'-nucleotidase, C-terminal domain ShL2_RS11240 PF00149 Calcineurin-like phosphoesterase ShL2_RS11245 PF02423 Ornithine cyclodeaminase/mu-crystallin family ShL2_RS11250 PF13344 Haloacid dehalogenase-like hydrolase ShL2_RS11250 PF00293 NUDIX domain ShL2_RS11260 PF00155 Aminotransferase class I and II ShL2_RS11265 PF01546 Peptidase family M20/M25/M40 ShL2_RS11265 PF07687 Peptidase dimerisation domain ShL2_RS11275 PF03143 Elongation factor Tu C-terminal domain ShL2_RS11275 PF00009 Elongation factor Tu GTP binding domain ShL2_RS11275 PF03144 Elongation factor Tu domain 2 ShL2_RS11280 PF03764 Elongation factor G, domain IV ShL2_RS11280 PF00679 Elongation factor G C-terminus ShL2_RS11280 PF03144 Elongation factor Tu domain 2 ShL2_RS11280 PF14492 Elongation Factor G, domain II ShL2_RS11280 PF00009 Elongation factor Tu GTP binding domain ShL2_RS11285 PF00177 Ribosomal protein S7p/S5e ShL2_RS11290 PF00164 Ribosomal protein S12/S23 ShL2_RS11295 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ShL2_RS11300 PF04997 RNA polymerase Rpb1, domain 1 ShL2_RS11300 PF04983 RNA polymerase Rpb1, domain 3 ShL2_RS11300 PF00623 RNA polymerase Rpb1, domain 2 ShL2_RS11300 PF04998 RNA polymerase Rpb1, domain 5 ShL2_RS11300 PF05000 RNA polymerase Rpb1, domain 4 ShL2_RS11310 PF05175 Methyltransferase small domain ShL2_RS11315 PF16320 Ribosomal protein L7/L12 dimerisation domain ShL2_RS11315 PF00542 Ribosomal protein L7/L12 C-terminal domain ShL2_RS11320 PF00466 Ribosomal protein L10 ShL2_RS11325 PF01610 Transposase ShL2_RS11325 PF13683 Integrase core domain ShL2_RS11330 PF00687 Ribosomal protein L1p/L10e family ShL2_RS11335 PF03946 Ribosomal protein L11, N-terminal domain ShL2_RS11335 PF00298 Ribosomal protein L11, RNA binding domain ShL2_RS11340 PF02357 Transcription termination factor nusG ShL2_RS11345 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ShL2_RS11355 PF05991 YacP-like NYN domain ShL2_RS11360 PF00588 SpoU rRNA Methylase family ShL2_RS11360 PF08032 RNA 2'-O ribose methyltransferase substrate binding ShL2_RS11365 PF00636 Ribonuclease III domain ShL2_RS11370 PF09190 DALR domain ShL2_RS11370 PF01406 tRNA synthetases class I (C) catalytic domain ShL2_RS11375 PF00132 Bacterial transferase hexapeptide (six repeats) ShL2_RS11380 PF00749 tRNA synthetases class I (E and Q), catalytic domain ShL2_RS11390 PF18073 Rubredoxin metal binding domain ShL2_RS11395 PF00004 ATPase family associated with various cellular activities (AAA) ShL2_RS11395 PF10431 C-terminal, D2-small domain, of ClpB protein ShL2_RS11395 PF17871 AAA lid domain ShL2_RS11395 PF07724 AAA domain (Cdc48 subfamily) ShL2_RS11395 PF02861 Clp amino terminal domain, pathogenicity island component ShL2_RS11400 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain ShL2_RS11405 PF02151 UvrB/uvrC motif ShL2_RS11410 PF17727 CtsR C-terminal dimerization domain ShL2_RS11410 PF05848 CtsR N-terminal HTH domain ShL2_RS11415 PF01773 Na+ dependent nucleoside transporter N-terminus ShL2_RS11415 PF07662 Na+ dependent nucleoside transporter C-terminus ShL2_RS11420 PF01174 SNO glutamine amidotransferase family ShL2_RS11425 PF01680 SOR/SNZ family ShL2_RS11430 PF00155 Aminotransferase class I and II ShL2_RS11430 PF00392 Bacterial regulatory proteins, gntR family ShL2_RS11435 PF07681 DoxX ShL2_RS11505 PF00152 tRNA synthetases class II (D, K and N) ShL2_RS11505 PF01336 OB-fold nucleic acid binding domain ShL2_RS11510 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ShL2_RS11515 PF02152 Dihydroneopterin aldolase ShL2_RS11520 PF00809 Pterin binding enzyme ShL2_RS11525 PF00291 Pyridoxal-phosphate dependent enzyme ShL2_RS11530 PF01430 Hsp33 protein ShL2_RS11535 PF01434 Peptidase family M41 ShL2_RS11535 PF06480 FtsH Extracellular ShL2_RS11535 PF00004 ATPase family associated with various cellular activities (AAA) ShL2_RS11535 PF17862 AAA+ lid domain ShL2_RS11540 PF00156 Phosphoribosyl transferase domain ShL2_RS11545 PF01171 PP-loop family ShL2_RS11545 PF11734 TilS substrate C-terminal domain ShL2_RS11550 PF00575 S1 RNA binding domain ShL2_RS11560 PF01479 S4 domain ShL2_RS11565 PF03819 MazG nucleotide pyrophosphohydrolase domain ShL2_RS11565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ShL2_RS11570 PF01943 Polysaccharide biosynthesis protein ShL2_RS11570 PF14667 Polysaccharide biosynthesis C-terminal domain ShL2_RS11575 PF00271 Helicase conserved C-terminal domain ShL2_RS11575 PF17757 UvrB interaction domain ShL2_RS11575 PF03461 TRCF domain ShL2_RS11575 PF02559 CarD-like/TRCF domain ShL2_RS11575 PF00270 DEAD/DEAH box helicase ShL2_RS11580 PF01195 Peptidyl-tRNA hydrolase ShL2_RS11585 PF14693 Ribosomal protein TL5, C-terminal domain ShL2_RS11585 PF01386 Ribosomal L25p family ShL2_RS11590 PF14572 Phosphoribosyl synthetase-associated domain ShL2_RS11590 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ShL2_RS11595 PF00132 Bacterial transferase hexapeptide (six repeats) ShL2_RS11595 PF00483 Nucleotidyl transferase ShL2_RS11600 PF04026 SpoVG ShL2_RS11605 PF01042 Endoribonuclease L-PSP ShL2_RS11610 PF09182 Bacterial purine repressor, N-terminal ShL2_RS11610 PF00156 Phosphoribosyl transferase domain ShL2_RS11615 PF00288 GHMP kinases N terminal domain ShL2_RS11615 PF08544 GHMP kinases C terminal ShL2_RS11620 PF06257 Biofilm formation stimulator VEG ShL2_RS11625 PF00398 Ribosomal RNA adenine dimethylase ShL2_RS11630 PF13331 Domain of unknown function (DUF4093) ShL2_RS11630 PF01751 Toprim domain ShL2_RS11635 PF01026 TatD related DNase ShL2_RS11640 PF09334 tRNA synthetases class I (M) ShL2_RS11640 PF01588 Putative tRNA binding domain ShL2_RS11640 PF08264 Anticodon-binding domain of tRNA ShL2_RS11645 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ShL2_RS11650 PF01541 GIY-YIG catalytic domain ShL2_RS11655 PF05175 Methyltransferase small domain ShL2_RS11660 PF06156 Initiation control protein YabA ShL2_RS11665 PF04468 PSP1 C-terminal conserved region ShL2_RS11670 PF09115 DNA polymerase III, delta subunit, C terminal ShL2_RS11675 PF06153 Cyclic-di-AMP receptor ShL2_RS11680 PF02223 Thymidylate kinase ShL2_RS11685 PF01276 Orn/Lys/Arg decarboxylase, major domain ShL2_RS11685 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ShL2_RS11690 PF13302 Acetyltransferase (GNAT) domain ShL2_RS11710 PF02132 RecR protein ShL2_RS11710 PF13662 Toprim domain ShL2_RS11715 PF02575 YbaB/EbfC DNA-binding family ShL2_RS11720 PF12169 DNA polymerase III subunits gamma and tau domain III ShL2_RS11730 PF07702 UTRA domain ShL2_RS11730 PF00392 Bacterial regulatory proteins, gntR family ShL2_RS11735 PF16657 Maltogenic Amylase, C-terminal domain ShL2_RS11735 PF00128 Alpha amylase, catalytic domain ShL2_RS11740 PF02378 Phosphotransferase system, EIIC ShL2_RS11740 PF00367 phosphotransferase system, EIIB ShL2_RS11750 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ShL2_RS11750 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS11755 PF04898 Glutamate synthase central domain ShL2_RS11755 PF00310 Glutamine amidotransferases class-II ShL2_RS11755 PF01645 Conserved region in glutamate synthase ShL2_RS11755 PF01493 GXGXG motif ShL2_RS11780 PF00293 NUDIX domain ShL2_RS11790 PF01476 LysM domain ShL2_RS11790 PF05257 CHAP domain ShL2_RS11795 PF01053 Cys/Met metabolism PLP-dependent enzyme ShL2_RS11800 PF00291 Pyridoxal-phosphate dependent enzyme ShL2_RS11815 PF00209 Sodium:neurotransmitter symporter family ShL2_RS11830 PF12146 Serine aminopeptidase, S33 ShL2_RS11840 PF01569 PAP2 superfamily ShL2_RS11850 PF10057 Uncharacterized conserved protein (DUF2294) ShL2_RS11855 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) ShL2_RS11860 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ShL2_RS11860 PF00361 Proton-conducting membrane transporter ShL2_RS11865 PF06993 Protein of unknown function (DUF1304) ShL2_RS11875 PF02386 Cation transport protein ShL2_RS11885 PF10668 Phage terminase small subunit ShL2_RS11885 PF03592 Terminase small subunit ShL2_RS11905 PF00589 Phage integrase family ShL2_RS11905 PF14659 Phage integrase, N-terminal SAM-like domain ShL2_RS11910 PF00958 GMP synthase C terminal domain ShL2_RS11910 PF00117 Glutamine amidotransferase class-I ShL2_RS11915 PF00478 IMP dehydrogenase / GMP reductase domain ShL2_RS11915 PF00571 CBS domain ShL2_RS11920 PF00860 Permease family ShL2_RS11930 PF11181 Heat induced stress protein YflT ShL2_RS11945 PF00375 Sodium:dicarboxylate symporter family ShL2_RS11950 PF00881 Nitroreductase family ShL2_RS11960 PF00578 AhpC/TSA family ShL2_RS11965 PF13192 Thioredoxin domain ShL2_RS11965 PF07992 Pyridine nucleotide-disulphide oxidoreductase ShL2_RS11975 PF00300 Histidine phosphatase superfamily (branch 1) ShL2_RS11980 PF01810 LysE type translocator ShL2_RS12030 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ShL2_RS12035 PF00905 Penicillin binding protein transpeptidase domain ShL2_RS12035 PF05569 BlaR1 peptidase M56 ShL2_RS12040 PF03965 Penicillinase repressor ShL2_RS12045 PF02796 Helix-turn-helix domain of resolvase ShL2_RS12045 PF00239 Resolvase, N terminal domain ShL2_RS12050 PF09299 Mu transposase, C-terminal ShL2_RS12050 PF00665 Integrase core domain ShL2_RS12055 PF13401 AAA domain ShL2_RS12060 PF02796 Helix-turn-helix domain of resolvase ShL2_RS12060 PF00239 Resolvase, N terminal domain ShL2_RS12065 PF00440 Bacterial regulatory proteins, tetR family ShL2_RS12065 PF08360 QacR-like protein, C-terminal region ShL2_RS12070 PF07690 Major Facilitator Superfamily ShL2_RS12140 PF00403 Heavy-metal-associated domain ShL2_RS12145 PF00403 Heavy-metal-associated domain ShL2_RS12150 PF02583 Metal-sensitive transcriptional repressor ShL2_RS12160 PF01545 Cation efflux family ShL2_RS12160 PF16916 Dimerisation domain of Zinc Transporter ShL2_RS12180 PF13610 DDE domain ShL2_RS12185 PF00005 ABC transporter ShL2_RS12235 PF01084 Ribosomal protein S18 ShL2_RS12240 PF00436 Single-strand binding protein family ShL2_RS12245 PF01250 Ribosomal protein S6 ShL2_RS12260 PF06071 Protein of unknown function (DUF933) ShL2_RS12260 PF01926 50S ribosome-binding GTPase ShL2_RS12265 PF06107 Bacterial protein of unknown function (DUF951) ShL2_RS12270 PF00924 Mechanosensitive ion channel ShL2_RS12275 PF17762 HTH domain found in ParB protein ShL2_RS12275 PF02195 ParB-like nuclease domain ShL2_RS12280 PF01053 Cys/Met metabolism PLP-dependent enzyme ShL2_RS12285 PF01053 Cys/Met metabolism PLP-dependent enzyme ShL2_RS12290 PF02219 Methylenetetrahydrofolate reductase ShL2_RS12290 PF02574 Homocysteine S-methyltransferase ShL2_RS12295 PF01717 Cobalamin-independent synthase, Catalytic domain ShL2_RS12295 PF08267 Cobalamin-independent synthase, N-terminal domain ShL2_RS12310 PF00005 ABC transporter ShL2_RS12310 PF12848 ABC transporter ShL2_RS12310 PF16326 ABC transporter C-terminal domain ShL2_RS12320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ShL2_RS12325 PF13302 Acetyltransferase (GNAT) domain ShL2_RS12340 PF10502 Signal peptidase, peptidase S26 ShL2_RS12350 PF00005 ABC transporter ShL2_RS12355 PF02687 FtsX-like permease family ShL2_RS12365 PF17210 SdrD B-like domain ShL2_RS12365 PF10425 C-terminus of bacterial fibrinogen-binding adhesin ShL2_RS12365 PF00746 LPXTG cell wall anchor motif ShL2_RS12365 PF04650 YSIRK type signal peptide ShL2_RS12365 PF17961 Bacterial Ig domain ShL2_RS12390 PF17762 HTH domain found in ParB protein ShL2_RS12390 PF02195 ParB-like nuclease domain ShL2_RS12395 PF02527 rRNA small subunit methyltransferase G ShL2_RS12400 PF13932 GidA associated domain ShL2_RS12400 PF01134 Glucose inhibited division protein A ShL2_RS12405 PF12631 MnmE helical domain ShL2_RS12405 PF10396 GTP-binding protein TrmE N-terminus ShL2_RS12405 PF01926 50S ribosome-binding GTPase ShL2_RS12410 PF00825 Ribonuclease P ShL2_RS12415 PF00468 Ribosomal protein L34 ShL2_RS12435 PF05154 TM2 domain ShL2_RS12480 PF00145 C-5 cytosine-specific DNA methylase ShL2_RS12510 PF14044 NETI protein ShL2_RS12605 PF09586 Bacterial membrane protein YfhO ShL2_RS12625 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) ShL2_RS12645 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ShL2_RS12645 PF00535 Glycosyl transferase family 2 ShL2_RS12720 PF00471 Ribosomal protein L33