SHYC_RS00005 PF00308 Bacterial dnaA protein SHYC_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix SHYC_RS00005 PF11638 DnaA N-terminal domain SHYC_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain SHYC_RS00010 PF02767 DNA polymerase III beta subunit, central domain SHYC_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain SHYC_RS00015 PF13462 Thioredoxin SHYC_RS00020 PF13275 S4 domain SHYC_RS00025 PF02463 RecF/RecN/SMC N terminal domain SHYC_RS00030 PF00204 DNA gyrase B SHYC_RS00030 PF00986 DNA gyrase B subunit, carboxyl terminus SHYC_RS00030 PF01751 Toprim domain SHYC_RS00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS00035 PF00521 DNA gyrase/topoisomerase IV, subunit A SHYC_RS00035 PF03989 DNA gyrase C-terminal domain, beta-propeller SHYC_RS00040 PF01256 Carbohydrate kinase SHYC_RS00045 PF00221 Aromatic amino acid lyase SHYC_RS00050 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SHYC_RS00050 PF02403 Seryl-tRNA synthetase N-terminal domain SHYC_RS00060 PF00741 SHYC_RS00060 SHYC_RS00065 PF05800 SHYC_RS00065 SHYC_RS00070 PF06386 SHYC_RS00070 SHYC_RS00075 PF05120 SHYC_RS00075 SHYC_RS00080 PF06386 SHYC_RS00080 SHYC_RS00085 PF00741 SHYC_RS00085 SHYC_RS00090 PF05121 SHYC_RS00090 SHYC_RS00095 PF00741 SHYC_RS00095 SHYC_RS00115 PF03591 SHYC_RS00115 SHYC_RS00120 PF05437 SHYC_RS00120 SHYC_RS00125 PF00561 alpha/beta hydrolase fold SHYC_RS00130 PF09991 SHYC_RS00130 SHYC_RS00135 PF01368 DHH family SHYC_RS00135 PF02272 DHHA1 domain SHYC_RS00140 PF01281 Ribosomal protein L9, N-terminal domain SHYC_RS00140 PF03948 Ribosomal protein L9, C-terminal domain SHYC_RS00145 PF00772 DnaB-like helicase N terminal domain SHYC_RS00145 PF03796 DnaB-like helicase C terminal domain SHYC_RS00150 PF00709 Adenylosuccinate synthetase SHYC_RS00155 PF14145 SHYC_RS00155 SHYC_RS00170 PF00072 Response regulator receiver domain SHYC_RS00170 PF00486 Transcriptional regulatory protein, C terminal SHYC_RS00175 PF00512 His Kinase A (phospho-acceptor) domain SHYC_RS00175 PF00672 HAMP domain SHYC_RS00175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS00175 PF13426 PAS domain SHYC_RS00180 PF07435 YycH protein SHYC_RS00185 PF09648 YycH protein SHYC_RS00190 PF00753 Metallo-beta-lactamase superfamily SHYC_RS00195 PF01022 Bacterial regulatory protein, arsR family SHYC_RS00200 PF02040 SHYC_RS00200 SHYC_RS00205 PF01451 Low molecular weight phosphotyrosine protein phosphatase SHYC_RS00210 PF02590 Predicted SPOUT methyltransferase SHYC_RS00230 PF02384 N-6 DNA Methylase SHYC_RS00230 PF12161 HsdM N-terminal domain SHYC_RS00235 PF01420 Type I restriction modification DNA specificity domain SHYC_RS00240 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) SHYC_RS00240 PF04851 Type III restriction enzyme, res subunit SHYC_RS00240 PF11867 SHYC_RS00240 SHYC_RS00245 PF00975 Thioesterase domain SHYC_RS00250 PF01648 4'-phosphopantetheinyl transferase superfamily SHYC_RS00255 PF00501 AMP-binding enzyme SHYC_RS00255 PF13193 AMP-binding enzyme C-terminal domain SHYC_RS00260 PF00501 AMP-binding enzyme SHYC_RS00260 PF00550 Phosphopantetheine attachment site SHYC_RS00260 PF00668 Condensation domain SHYC_RS00260 PF08415 SHYC_RS00260 SHYC_RS00265 PF01408 Oxidoreductase family, NAD-binding Rossmann fold SHYC_RS00265 PF08242 Methyltransferase domain SHYC_RS00275 PF00668 Condensation domain SHYC_RS00275 PF00975 Thioesterase domain SHYC_RS00275 PF08415 SHYC_RS00275 SHYC_RS00280 PF09605 SHYC_RS00280 SHYC_RS00285 PF02361 Cobalt transport protein SHYC_RS00290 PF00005 ABC transporter SHYC_RS00295 PF00005 ABC transporter SHYC_RS00295 PF00664 ABC transporter transmembrane region SHYC_RS00300 PF00005 ABC transporter SHYC_RS00300 PF00664 ABC transporter transmembrane region SHYC_RS00305 PF03435 Saccharopine dehydrogenase SHYC_RS00310 PF00425 chorismate binding enzyme SHYC_RS00315 PF02216 B domain SHYC_RS00315 PF11621 C3 binding domain 4 of IgG-bind protein SBI SHYC_RS00320 PF02669 SHYC_RS00320 SHYC_RS00325 PF00122 E1-E2 ATPase SHYC_RS00325 PF00702 haloacid dehalogenase-like hydrolase SHYC_RS00330 PF03814 SHYC_RS00330 SHYC_RS00335 PF00512 His Kinase A (phospho-acceptor) domain SHYC_RS00335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS00335 PF02702 Osmosensitive K+ channel His kinase sensor domain SHYC_RS00335 PF13493 Domain of unknown function (DUF4118) SHYC_RS00340 PF00072 Response regulator receiver domain SHYC_RS00340 PF00486 Transcriptional regulatory protein, C terminal SHYC_RS00345 PF00291 Pyridoxal-phosphate dependent enzyme SHYC_RS00350 PF02423 Ornithine cyclodeaminase/mu-crystallin family SHYC_RS00355 PF04183 IucA / IucC family SHYC_RS00355 PF06276 Ferric iron reductase FhuF-like transporter SHYC_RS00360 PF00083 Sugar (and other) transporter SHYC_RS00360 PF07690 Major Facilitator Superfamily SHYC_RS00365 PF04183 IucA / IucC family SHYC_RS00365 PF06276 Ferric iron reductase FhuF-like transporter SHYC_RS00370 PF04183 IucA / IucC family SHYC_RS00370 PF06276 Ferric iron reductase FhuF-like transporter SHYC_RS00375 PF03328 HpcH/HpaI aldolase/citrate lyase family SHYC_RS00380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SHYC_RS00380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SHYC_RS00385 PF02195 ParB-like nuclease domain SHYC_RS00390 PF13561 Enoyl-(Acyl carrier protein) reductase SHYC_RS00395 PF01541 GIY-YIG catalytic domain SHYC_RS00400 PF03572 Peptidase family S41 SHYC_RS00405 PF07690 Major Facilitator Superfamily SHYC_RS00410 PF01546 Peptidase family M20/M25/M40 SHYC_RS00410 PF07687 Peptidase dimerisation domain SHYC_RS00415 PF12833 Helix-turn-helix domain SHYC_RS00425 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) SHYC_RS00430 PF07690 Major Facilitator Superfamily SHYC_RS00445 PF00056 lactate/malate dehydrogenase, NAD binding domain SHYC_RS00445 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SHYC_RS00450 PF13597 Anaerobic ribonucleoside-triphosphate reductase SHYC_RS00455 PF13353 4Fe-4S single cluster domain SHYC_RS00460 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SHYC_RS00460 PF09199 Domain of unknown function (DUF1954) SHYC_RS00465 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SHYC_RS00465 PF09199 Domain of unknown function (DUF1954) SHYC_RS00470 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SHYC_RS00470 PF09199 Domain of unknown function (DUF1954) SHYC_RS00475 PF00746 SHYC_RS00475 SHYC_RS00475 PF04650 SHYC_RS00475 SHYC_RS00475 PF05738 Cna protein B-type domain SHYC_RS00475 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SHYC_RS00480 PF00746 SHYC_RS00480 SHYC_RS00480 PF05738 Cna protein B-type domain SHYC_RS00480 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SHYC_RS00485 PF04650 SHYC_RS00485 SHYC_RS00490 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SHYC_RS00490 PF09199 Domain of unknown function (DUF1954) SHYC_RS00505 PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain SHYC_RS00505 PF09199 Domain of unknown function (DUF1954) SHYC_RS00530 PF01381 Helix-turn-helix SHYC_RS00540 PF04507 Protein of unknown function, DUF576 SHYC_RS00560 PF04507 Protein of unknown function, DUF576 SHYC_RS00565 PF04507 Protein of unknown function, DUF576 SHYC_RS00570 PF04507 Protein of unknown function, DUF576 SHYC_RS00575 PF04507 Protein of unknown function, DUF576 SHYC_RS00580 PF04507 Protein of unknown function, DUF576 SHYC_RS00590 PF04507 Protein of unknown function, DUF576 SHYC_RS00605 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SHYC_RS00605 PF05257 CHAP domain SHYC_RS00610 PF12698 ABC-2 family transporter protein SHYC_RS00615 PF00440 Bacterial regulatory proteins, tetR family SHYC_RS00620 PF06100 Streptococcal 67 kDa myosin-cross-reactive antigen like family SHYC_RS00625 PF02216 B domain SHYC_RS00625 PF11621 C3 binding domain 4 of IgG-bind protein SBI SHYC_RS00630 PF01297 Periplasmic solute binding protein family SHYC_RS00630 PF09223 YodA lipocalin-like domain SHYC_RS00635 PF01032 FecCD transport family SHYC_RS00640 PF01032 FecCD transport family SHYC_RS00645 PF01497 Periplasmic binding protein SHYC_RS00650 PF02517 CAAX protease self-immunity SHYC_RS00655 PF06028 Alpha/beta hydrolase of unknown function (DUF915) SHYC_RS00665 PF11188 SHYC_RS00665 SHYC_RS00670 PF13443 Cro/C1-type HTH DNA-binding domain SHYC_RS00675 PF00232 Glycosyl hydrolase family 1 SHYC_RS00680 PF00392 Bacterial regulatory proteins, gntR family SHYC_RS00680 PF07702 UTRA domain SHYC_RS00685 PF00583 Acetyltransferase (GNAT) family SHYC_RS00690 PF04235 SHYC_RS00690 SHYC_RS00695 PF02517 CAAX protease self-immunity SHYC_RS00700 PF01476 LysM domain SHYC_RS00700 PF02216 B domain SHYC_RS00700 PF04650 SHYC_RS00700 SHYC_RS00705 PF02517 CAAX protease self-immunity SHYC_RS00710 PF00392 Bacterial regulatory proteins, gntR family SHYC_RS00715 PF01048 Phosphorylase superfamily SHYC_RS00720 PF07690 Major Facilitator Superfamily SHYC_RS00725 PF01791 DeoC/LacD family aldolase SHYC_RS00730 PF01676 Metalloenzyme superfamily SHYC_RS00735 PF06028 Alpha/beta hydrolase of unknown function (DUF915) SHYC_RS00740 PF01548 SHYC_RS00740 SHYC_RS00740 PF02371 SHYC_RS00740 SHYC_RS00745 PF02146 Sir2 family SHYC_RS00750 PF05656 SHYC_RS00750 SHYC_RS00755 PF05656 SHYC_RS00755 SHYC_RS00760 PF13460 NADH(P)-binding SHYC_RS00765 PF03073 TspO/MBR family SHYC_RS00770 PF00875 DNA photolyase SHYC_RS00770 PF03441 FAD binding domain of DNA photolyase SHYC_RS00775 PF13649 Methyltransferase domain SHYC_RS00780 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS00785 PF01381 Helix-turn-helix SHYC_RS00790 PF11368 SHYC_RS00790 SHYC_RS00795 PF00005 ABC transporter SHYC_RS00795 PF00571 CBS domain SHYC_RS00800 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS00805 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SHYC_RS00810 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS00815 PF00756 Putative esterase SHYC_RS00820 PF13738 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS00825 PF07670 Nucleoside recognition SHYC_RS00835 PF00696 Amino acid kinase family SHYC_RS00840 PF13520 Amino acid permease SHYC_RS00845 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SHYC_RS00845 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SHYC_RS00850 PF02274 Amidinotransferase SHYC_RS00855 PF01316 Arginine repressor, DNA binding domain SHYC_RS00855 PF02863 Arginine repressor, C-terminal domain SHYC_RS00860 PF06039 SHYC_RS00860 SHYC_RS00865 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family SHYC_RS00870 PF00324 Amino acid permease SHYC_RS00885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS00890 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SHYC_RS00895 PF00072 Response regulator receiver domain SHYC_RS00895 PF00486 Transcriptional regulatory protein, C terminal SHYC_RS00900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS00905 PF00005 ABC transporter SHYC_RS00910 PF02687 SHYC_RS00910 SHYC_RS00915 PF02525 Flavodoxin-like fold SHYC_RS00925 PF00501 AMP-binding enzyme SHYC_RS00925 PF13193 AMP-binding enzyme C-terminal domain SHYC_RS00930 PF00890 FAD binding domain SHYC_RS00935 PF00011 Hsp20/alpha crystallin family SHYC_RS00940 PF13395 HNH endonuclease SHYC_RS00940 PF16592 SHYC_RS00940 SHYC_RS00945 PF01867 CRISPR associated protein Cas1 SHYC_RS00950 PF09827 CRISPR associated protein Cas2 SHYC_RS00960 PF01566 SHYC_RS00960 SHYC_RS00965 PF00933 Glycosyl hydrolase family 3 N terminal domain SHYC_RS00970 PF13419 Haloacid dehalogenase-like hydrolase SHYC_RS00975 PF12833 Helix-turn-helix domain SHYC_RS00980 PF01081 KDPG and KHG aldolase SHYC_RS00985 PF00294 pfkB family carbohydrate kinase SHYC_RS00990 PF13347 MFS/sugar transport protein SHYC_RS00995 PF02614 Glucuronate isomerase SHYC_RS01000 PF03786 D-mannonate dehydratase (UxuA) SHYC_RS01005 PF00106 short chain dehydrogenase SHYC_RS01010 PF00703 Glycosyl hydrolases family 2 SHYC_RS01010 PF02836 Glycosyl hydrolases family 2, TIM barrel domain SHYC_RS01010 PF02837 Glycosyl hydrolases family 2, sugar binding domain SHYC_RS01015 PF11457 SHYC_RS01015 SHYC_RS01020 PF04397 LytTr DNA-binding domain SHYC_RS01025 PF13500 AAA domain SHYC_RS01030 PF00202 Aminotransferase class-III SHYC_RS01035 PF00155 Aminotransferase class I and II SHYC_RS01040 PF03744 SHYC_RS01040 SHYC_RS01045 PF02652 SHYC_RS01045 SHYC_RS01055 PF00344 SecY translocase SHYC_RS01060 PF16993 SHYC_RS01060 SHYC_RS01065 PF16929 SHYC_RS01065 SHYC_RS01070 PF15432 SHYC_RS01070 SHYC_RS01075 PF01043 SecA preprotein cross-linking domain SHYC_RS01075 PF07516 SecA Wing and Scaffold domain SHYC_RS01075 PF07517 SecA DEAD-like domain SHYC_RS01080 PF00534 Glycosyl transferases group 1 SHYC_RS01090 PF02567 Phenazine biosynthesis-like protein SHYC_RS01095 PF00108 Thiolase, N-terminal domain SHYC_RS01095 PF02803 Thiolase, C-terminal domain SHYC_RS01100 PF00378 Enoyl-CoA hydratase/isomerase family SHYC_RS01100 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain SHYC_RS01100 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain SHYC_RS01105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SHYC_RS01105 PF02770 Acyl-CoA dehydrogenase, middle domain SHYC_RS01105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SHYC_RS01110 PF00501 AMP-binding enzyme SHYC_RS01110 PF13193 AMP-binding enzyme C-terminal domain SHYC_RS01115 PF01144 Coenzyme A transferase SHYC_RS01120 PF02687 SHYC_RS01120 SHYC_RS01125 PF00005 ABC transporter SHYC_RS01130 PF00004 ATPase family associated with various cellular activities (AAA) SHYC_RS01135 PF02082 Transcriptional regulator SHYC_RS01140 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SHYC_RS01140 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS01145 PF01925 SHYC_RS01145 SHYC_RS01150 PF02583 Metal-sensitive transcriptional repressor SHYC_RS01155 PF00581 Rhodanese-like domain SHYC_RS01155 PF01206 Sulfurtransferase TusA SHYC_RS01155 PF13686 DsrE/DsrF/DrsH-like family SHYC_RS01160 PF00581 Rhodanese-like domain SHYC_RS01160 PF00753 Metallo-beta-lactamase superfamily SHYC_RS01165 PF00356 Bacterial regulatory proteins, lacI family SHYC_RS01165 PF13377 Periplasmic binding protein-like domain SHYC_RS01170 PF00294 pfkB family carbohydrate kinase SHYC_RS01175 PF05025 RbsD / FucU transport protein family SHYC_RS01180 PF00005 ABC transporter SHYC_RS01185 PF02653 SHYC_RS01185 SHYC_RS01190 PF13407 Periplasmic binding protein domain SHYC_RS01195 PF01625 Peptide methionine sulfoxide reductase SHYC_RS01205 PF00999 Sodium/hydrogen exchanger family SHYC_RS01210 PF07670 Nucleoside recognition SHYC_RS01215 PF01546 Peptidase family M20/M25/M40 SHYC_RS01215 PF07687 Peptidase dimerisation domain SHYC_RS01220 PF00171 Aldehyde dehydrogenase family SHYC_RS01230 PF13561 Enoyl-(Acyl carrier protein) reductase SHYC_RS01235 PF04346 SHYC_RS01235 SHYC_RS01240 PF00072 Response regulator receiver domain SHYC_RS01240 PF03861 ANTAR domain SHYC_RS01245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS01245 PF07568 SHYC_RS01245 SHYC_RS01245 PF12282 Signal transduction histidine kinase SHYC_RS01250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SHYC_RS01250 PF00874 PRD domain SHYC_RS01250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SHYC_RS01250 PF08279 HTH domain SHYC_RS01255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SHYC_RS01260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SHYC_RS01265 PF03611 SHYC_RS01265 SHYC_RS01270 PF01773 Na+ dependent nucleoside transporter N-terminus SHYC_RS01270 PF07662 Na+ dependent nucleoside transporter C-terminus SHYC_RS01275 PF04227 Indigoidine synthase A like protein SHYC_RS01280 PF00294 pfkB family carbohydrate kinase SHYC_RS01280 PF13412 Winged helix-turn-helix DNA-binding SHYC_RS01285 PF01053 Cys/Met metabolism PLP-dependent enzyme SHYC_RS01290 PF01965 DJ-1/PfpI family SHYC_RS01295 PF07690 Major Facilitator Superfamily SHYC_RS01300 PF07859 alpha/beta hydrolase fold SHYC_RS01305 PF01297 Periplasmic solute binding protein family SHYC_RS01310 PF00274 Fructose-bisphosphate aldolase class-I SHYC_RS01315 PF04507 Protein of unknown function, DUF576 SHYC_RS01325 PF04507 Protein of unknown function, DUF576 SHYC_RS01330 PF04507 Protein of unknown function, DUF576 SHYC_RS01340 PF04507 Protein of unknown function, DUF576 SHYC_RS01350 PF04507 Protein of unknown function, DUF576 SHYC_RS01370 PF07690 Major Facilitator Superfamily SHYC_RS01375 PF00857 Isochorismatase family SHYC_RS01380 PF00797 N-acetyltransferase SHYC_RS01385 PF00440 Bacterial regulatory proteins, tetR family SHYC_RS01395 PF01757 SHYC_RS01395 SHYC_RS01405 PF02558 Ketopantoate reductase PanE/ApbA SHYC_RS01405 PF08546 Ketopantoate reductase PanE/ApbA C terminal SHYC_RS01410 PF07690 Major Facilitator Superfamily SHYC_RS01415 PF01546 Peptidase family M20/M25/M40 SHYC_RS01415 PF07687 Peptidase dimerisation domain SHYC_RS01420 PF07690 Major Facilitator Superfamily SHYC_RS01425 PF01235 SHYC_RS01425 SHYC_RS01430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SHYC_RS01430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SHYC_RS01440 PF06779 SHYC_RS01440 SHYC_RS01445 PF05552 Conserved TM helix SHYC_RS01465 PF05908 Protein of unknown function (DUF867) SHYC_RS01470 PF09586 SHYC_RS01470 SHYC_RS01480 PF01019 Gamma-glutamyltranspeptidase SHYC_RS01490 PF09587 Bacterial capsule synthesis protein PGA_cap SHYC_RS01495 PF14102 SHYC_RS01495 SHYC_RS01500 PF08245 Mur ligase middle domain SHYC_RS01510 PF13091 PLD-like domain SHYC_RS01510 PF13396 SHYC_RS01510 SHYC_RS01515 PF03992 Antibiotic biosynthesis monooxygenase SHYC_RS01520 PF00512 His Kinase A (phospho-acceptor) domain SHYC_RS01520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS01525 PF00072 Response regulator receiver domain SHYC_RS01525 PF00486 Transcriptional regulatory protein, C terminal SHYC_RS01530 PF03824 SHYC_RS01530 SHYC_RS01535 PF10078 SHYC_RS01535 SHYC_RS01545 PF09335 SHYC_RS01545 SHYC_RS01555 PF00245 Alkaline phosphatase SHYC_RS01560 PF00245 Alkaline phosphatase SHYC_RS01565 PF13508 Acetyltransferase (GNAT) domain SHYC_RS01570 PF03306 Alpha-acetolactate decarboxylase SHYC_RS01575 PF00583 Acetyltransferase (GNAT) family SHYC_RS01585 PF02028 BCCT family transporter SHYC_RS01595 PF00171 Aldehyde dehydrogenase family SHYC_RS01600 PF00732 GMC oxidoreductase SHYC_RS01600 PF05199 GMC oxidoreductase SHYC_RS01605 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SHYC_RS01605 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SHYC_RS01610 PF01502 Phosphoribosyl-AMP cyclohydrolase SHYC_RS01610 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SHYC_RS01615 PF00977 Histidine biosynthesis protein SHYC_RS01620 PF00977 Histidine biosynthesis protein SHYC_RS01625 PF00117 Glutamine amidotransferase class-I SHYC_RS01630 PF00475 Imidazoleglycerol-phosphate dehydratase SHYC_RS01635 PF00155 Aminotransferase class I and II SHYC_RS01640 PF00815 Histidinol dehydrogenase SHYC_RS01645 PF01634 ATP phosphoribosyltransferase SHYC_RS01655 PF01791 DeoC/LacD family aldolase SHYC_RS01660 PF01676 Metalloenzyme superfamily SHYC_RS01665 PF07690 Major Facilitator Superfamily SHYC_RS01670 PF02733 Dak1 domain SHYC_RS01675 PF02734 DAK2 domain SHYC_RS01680 PF03610 PTS system fructose IIA component SHYC_RS01685 PF02388 FemAB family SHYC_RS01690 PF03831 PhnA protein SHYC_RS01690 PF08274 PhnA Zinc-Ribbon SHYC_RS01695 PF00171 Aldehyde dehydrogenase family SHYC_RS01710 PF12146 Putative lysophospholipase SHYC_RS01715 PF13411 MerR HTH family regulatory protein SHYC_RS01720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SHYC_RS01720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SHYC_RS01720 PF02378 Phosphotransferase system, EIIC SHYC_RS01725 PF07690 Major Facilitator Superfamily SHYC_RS01735 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SHYC_RS01735 PF05257 CHAP domain SHYC_RS01740 PF12698 ABC-2 family transporter protein SHYC_RS01750 PF06855 Protein of unknown function (DUF1250) SHYC_RS01755 PF02677 SHYC_RS01755 SHYC_RS01760 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SHYC_RS01765 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SHYC_RS01770 PF00535 Glycosyl transferase family 2 SHYC_RS01780 PF00367 phosphotransferase system, EIIB SHYC_RS01780 PF02378 Phosphotransferase system, EIIC SHYC_RS01785 PF04650 SHYC_RS01785 SHYC_RS01790 PF00881 Nitroreductase family SHYC_RS01795 PF03881 Fructosamine kinase SHYC_RS01800 PF07853 SHYC_RS01800 SHYC_RS01815 PF00005 ABC transporter SHYC_RS01820 PF02687 SHYC_RS01820 SHYC_RS01820 PF12704 MacB-like periplasmic core domain SHYC_RS01825 PF00144 Beta-lactamase SHYC_RS01830 PF00072 Response regulator receiver domain SHYC_RS01830 PF00486 Transcriptional regulatory protein, C terminal SHYC_RS01835 PF00512 His Kinase A (phospho-acceptor) domain SHYC_RS01835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS01845 PF01545 Cation efflux family SHYC_RS01850 PF03253 Urea transporter SHYC_RS01855 PF00547 Urease, gamma subunit SHYC_RS01860 PF00699 Urease beta subunit SHYC_RS01865 PF00449 Urease alpha-subunit, N-terminal domain SHYC_RS01865 PF01979 Amidohydrolase family SHYC_RS01870 PF16729 SHYC_RS01870 SHYC_RS01875 PF16729 SHYC_RS01875 SHYC_RS01880 PF00692 dUTPase SHYC_RS01885 PF02492 CobW/HypB/UreG, nucleotide-binding domain SHYC_RS01885 PF07683 Cobalamin synthesis protein cobW C-terminal domain SHYC_RS01890 PF00582 Universal stress protein family SHYC_RS01895 PF05525 SHYC_RS01895 SHYC_RS01900 PF04343 SHYC_RS01900 SHYC_RS01905 PF05684 SHYC_RS01905 SHYC_RS01920 PF01032 FecCD transport family SHYC_RS01925 PF01032 FecCD transport family SHYC_RS01930 PF00005 ABC transporter SHYC_RS01935 PF01497 Periplasmic binding protein SHYC_RS01940 PF01047 MarR family SHYC_RS01945 PF00881 Nitroreductase family SHYC_RS01950 PF04607 Region found in RelA / SpoT proteins SHYC_RS01955 PF01551 Peptidase family M23 SHYC_RS01960 PF05257 CHAP domain SHYC_RS01965 PF06737 Transglycosylase-like domain SHYC_RS01970 PF03976 Polyphosphate kinase 2 (PPK2) SHYC_RS01975 PF12146 Putative lysophospholipase SHYC_RS01980 PF04199 Putative cyclase SHYC_RS01985 PF07690 Major Facilitator Superfamily SHYC_RS01990 PF04650 SHYC_RS01990 SHYC_RS01995 PF13561 Enoyl-(Acyl carrier protein) reductase SHYC_RS02000 PF00199 Catalase SHYC_RS02000 PF06628 Catalase-related immune-responsive SHYC_RS02010 PF00375 Sodium:dicarboxylate symporter family SHYC_RS02025 PF13561 Enoyl-(Acyl carrier protein) reductase SHYC_RS02040 PF02706 Chain length determinant protein SHYC_RS02040 PF13807 SHYC_RS02040 SHYC_RS02045 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain SHYC_RS02055 PF02719 Polysaccharide biosynthesis protein SHYC_RS02055 PF13727 CoA-binding domain SHYC_RS02060 PF02719 Polysaccharide biosynthesis protein SHYC_RS02060 PF08485 Polysaccharide biosynthesis protein C-terminal SHYC_RS02065 PF01370 NAD dependent epimerase/dehydratase family SHYC_RS02070 PF02350 UDP-N-acetylglucosamine 2-epimerase SHYC_RS02075 PF00132 Bacterial transferase hexapeptide (six repeats) SHYC_RS02080 PF00534 Glycosyl transferases group 1 SHYC_RS02080 PF13439 Glycosyltransferase Family 4 SHYC_RS02090 PF00534 Glycosyl transferases group 1 SHYC_RS02095 PF02397 SHYC_RS02095 SHYC_RS02100 PF00132 Bacterial transferase hexapeptide (six repeats) SHYC_RS02105 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family SHYC_RS02110 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) SHYC_RS02115 PF00293 NUDIX domain SHYC_RS02125 PF05651 SHYC_RS02125 SHYC_RS02125 PF13556 PucR C-terminal helix-turn-helix domain SHYC_RS02130 PF00205 Thiamine pyrophosphate enzyme, central domain SHYC_RS02130 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SHYC_RS02130 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SHYC_RS02135 PF00425 chorismate binding enzyme SHYC_RS02135 PF04715 Anthranilate synthase component I, N terminal region SHYC_RS02140 PF00117 Glutamine amidotransferase class-I SHYC_RS02145 PF00591 Glycosyl transferase family, a/b domain SHYC_RS02150 PF00218 Indole-3-glycerol phosphate synthase SHYC_RS02155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase SHYC_RS02160 PF00291 Pyridoxal-phosphate dependent enzyme SHYC_RS02165 PF00290 Tryptophan synthase alpha chain SHYC_RS02170 PF13419 Haloacid dehalogenase-like hydrolase SHYC_RS02175 PF01242 6-pyruvoyl tetrahydropterin synthase SHYC_RS02180 PF00115 Cytochrome C and Quinol oxidase polypeptide I SHYC_RS02185 PF01565 FAD binding domain SHYC_RS02185 PF02913 FAD linked oxidases, C-terminal domain SHYC_RS02190 PF02754 SHYC_RS02190 SHYC_RS02190 PF13534 4Fe-4S dicluster domain SHYC_RS02195 PF00005 ABC transporter SHYC_RS02195 PF00664 ABC transporter transmembrane region SHYC_RS02200 PF00005 ABC transporter SHYC_RS02200 PF00664 ABC transporter transmembrane region SHYC_RS02205 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SHYC_RS02210 PF16242 SHYC_RS02210 SHYC_RS02215 PF01235 SHYC_RS02215 SHYC_RS02220 PF06874 SHYC_RS02220 SHYC_RS02225 PF07690 Major Facilitator Superfamily SHYC_RS02230 PF07690 Major Facilitator Superfamily SHYC_RS02235 PF04203 Sortase family SHYC_RS02240 PF02595 Glycerate kinase family SHYC_RS02245 PF01814 Hemerythrin HHE cation binding domain SHYC_RS02245 PF04405 SHYC_RS02245 SHYC_RS02250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SHYC_RS02250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SHYC_RS02255 PF13303 SHYC_RS02255 SHYC_RS02260 PF04055 Radical SAM superfamily SHYC_RS02260 PF13353 4Fe-4S single cluster domain SHYC_RS02265 PF01228 Glycine radical SHYC_RS02265 PF02901 Pyruvate formate lyase SHYC_RS02270 PF13460 NADH(P)-binding SHYC_RS02275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SHYC_RS02280 PF00005 ABC transporter SHYC_RS02280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHYC_RS02285 PF00005 ABC transporter SHYC_RS02285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHYC_RS02290 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS02295 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS02295 PF12911 SHYC_RS02295 SHYC_RS02310 PF03313 SHYC_RS02310 SHYC_RS02315 PF03315 Serine dehydratase beta chain SHYC_RS02320 PF13303 SHYC_RS02320 SHYC_RS02325 PF00171 Aldehyde dehydrogenase family SHYC_RS02330 PF13303 SHYC_RS02330 SHYC_RS02335 PF00939 Sodium:sulfate symporter transmembrane region SHYC_RS02345 PF01226 Formate/nitrite transporter SHYC_RS02350 PF00583 Acetyltransferase (GNAT) family SHYC_RS02355 PF01903 CbiX SHYC_RS02360 PF13241 Putative NAD(P)-binding SHYC_RS02365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain SHYC_RS02365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain SHYC_RS02365 PF04324 BFD-like [2Fe-2S] binding domain SHYC_RS02365 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS02370 PF13806 Rieske-like [2Fe-2S] domain SHYC_RS02375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SHYC_RS02380 PF00149 Calcineurin-like phosphoesterase SHYC_RS02380 PF02872 5'-nucleotidase, C-terminal domain SHYC_RS02385 PF00384 Molybdopterin oxidoreductase SHYC_RS02385 PF01568 Molydopterin dinucleotide binding domain SHYC_RS02385 PF14710 Respiratory nitrate reductase alpha N-terminal SHYC_RS02390 PF13247 4Fe-4S dicluster domain SHYC_RS02390 PF14711 Respiratory nitrate reductase beta C-terminal SHYC_RS02400 PF02665 Nitrate reductase gamma subunit SHYC_RS02405 PF13185 GAF domain SHYC_RS02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS02410 PF07730 Histidine kinase SHYC_RS02415 PF00072 Response regulator receiver domain SHYC_RS02415 PF00196 Bacterial regulatory proteins, luxR family SHYC_RS02420 PF07690 Major Facilitator Superfamily SHYC_RS02425 PF01546 Peptidase family M20/M25/M40 SHYC_RS02430 PF11337 SHYC_RS02430 SHYC_RS02435 PF05343 M42 glutamyl aminopeptidase SHYC_RS02440 PF00892 EamA-like transporter family SHYC_RS02445 PF16230 SHYC_RS02445 SHYC_RS02450 PF06855 Protein of unknown function (DUF1250) SHYC_RS02460 PF00483 Nucleotidyl transferase SHYC_RS02465 PF12833 Helix-turn-helix domain SHYC_RS02470 PF01544 CorA-like Mg2+ transporter protein SHYC_RS02475 PF12802 MarR family SHYC_RS02480 PF01895 PhoU domain SHYC_RS02480 PF02690 SHYC_RS02480 SHYC_RS02485 PF04234 CopC domain SHYC_RS02490 PF07987 Domain of unkown function (DUF1775) SHYC_RS02495 PF11070 SHYC_RS02495 SHYC_RS02500 PF13673 Acetyltransferase (GNAT) domain SHYC_RS02505 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS02510 PF00083 Sugar (and other) transporter SHYC_RS02515 PF00107 Zinc-binding dehydrogenase SHYC_RS02515 PF08240 Alcohol dehydrogenase GroES-like domain SHYC_RS02520 PF13673 Acetyltransferase (GNAT) domain SHYC_RS02530 PF02652 SHYC_RS02530 SHYC_RS02535 PF00534 Glycosyl transferases group 1 SHYC_RS02535 PF13439 Glycosyltransferase Family 4 SHYC_RS02540 PF06039 SHYC_RS02540 SHYC_RS02545 PF00512 His Kinase A (phospho-acceptor) domain SHYC_RS02545 PF00672 HAMP domain SHYC_RS02545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS02550 PF00072 Response regulator receiver domain SHYC_RS02550 PF00486 Transcriptional regulatory protein, C terminal SHYC_RS02555 PF02687 SHYC_RS02555 SHYC_RS02560 PF00005 ABC transporter SHYC_RS02565 PF02698 DUF218 domain SHYC_RS02570 PF12802 MarR family SHYC_RS02580 PF00440 Bacterial regulatory proteins, tetR family SHYC_RS02590 PF07859 alpha/beta hydrolase fold SHYC_RS02595 PF13303 SHYC_RS02595 SHYC_RS02600 PF13279 Thioesterase-like superfamily SHYC_RS02605 PF01070 FMN-dependent dehydrogenase SHYC_RS02610 PF02492 CobW/HypB/UreG, nucleotide-binding domain SHYC_RS02610 PF07683 Cobalamin synthesis protein cobW C-terminal domain SHYC_RS02615 PF03616 SHYC_RS02615 SHYC_RS02620 PF02311 AraC-like ligand binding domain SHYC_RS02620 PF12833 Helix-turn-helix domain SHYC_RS02630 PF03553 SHYC_RS02630 SHYC_RS02635 PF02245 Methylpurine-DNA glycosylase (MPG) SHYC_RS02640 PF05656 SHYC_RS02640 SHYC_RS02645 PF00005 ABC transporter SHYC_RS02645 PF13732 SHYC_RS02645 SHYC_RS02650 PF12698 ABC-2 family transporter protein SHYC_RS02655 PF02694 SHYC_RS02655 SHYC_RS02660 PF01263 Aldose 1-epimerase SHYC_RS02665 PF01381 Helix-turn-helix SHYC_RS02670 PF03473 MOSC domain SHYC_RS02670 PF03475 3-alpha domain SHYC_RS02675 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) SHYC_RS02685 PF00491 Arginase family SHYC_RS02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SHYC_RS02690 PF03466 LysR substrate binding domain SHYC_RS02695 PF01175 Urocanase SHYC_RS02700 PF01979 Amidohydrolase family SHYC_RS02705 PF01546 Peptidase family M20/M25/M40 SHYC_RS02705 PF07687 Peptidase dimerisation domain SHYC_RS02710 PF03553 SHYC_RS02710 SHYC_RS02715 PF08327 Activator of Hsp90 ATPase homolog 1-like protein SHYC_RS02725 PF01758 Sodium Bile acid symporter family SHYC_RS02735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SHYC_RS02740 PF13419 Haloacid dehalogenase-like hydrolase SHYC_RS02760 PF01226 Formate/nitrite transporter SHYC_RS02765 PF00324 Amino acid permease SHYC_RS02775 PF02517 CAAX protease self-immunity SHYC_RS02780 PF08279 HTH domain SHYC_RS02785 PF00459 Inositol monophosphatase family SHYC_RS02790 PF03816 Cell envelope-related transcriptional attenuator domain SHYC_RS02795 PF01470 Pyroglutamyl peptidase SHYC_RS02800 PF00384 Molybdopterin oxidoreductase SHYC_RS02800 PF01568 Molydopterin dinucleotide binding domain SHYC_RS02800 PF04879 Molybdopterin oxidoreductase Fe4S4 domain SHYC_RS02800 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SHYC_RS02800 PF12838 4Fe-4S dicluster domain SHYC_RS02800 PF13510 2Fe-2S iron-sulfur cluster binding domain SHYC_RS02805 PF07849 SHYC_RS02805 SHYC_RS02815 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SHYC_RS02820 PF01494 FAD binding domain SHYC_RS02825 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SHYC_RS02825 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SHYC_RS02830 PF05257 CHAP domain SHYC_RS02835 PF09685 SHYC_RS02835 SHYC_RS02840 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SHYC_RS02840 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain SHYC_RS02845 PF03553 SHYC_RS02845 SHYC_RS02855 PF05257 CHAP domain SHYC_RS02860 PF14470 Bacterial PH domain SHYC_RS02865 PF00296 Luciferase-like monooxygenase SHYC_RS02870 PF13564 SHYC_RS02870 SHYC_RS02875 PF01047 MarR family SHYC_RS02880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain SHYC_RS02880 PF02770 Acyl-CoA dehydrogenase, middle domain SHYC_RS02880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain SHYC_RS02885 PF04304 SHYC_RS02885 SHYC_RS02890 PF01497 Periplasmic binding protein SHYC_RS02895 PF00474 Sodium:solute symporter family SHYC_RS02900 PF00701 Dihydrodipicolinate synthetase family SHYC_RS02905 PF00392 Bacterial regulatory proteins, gntR family SHYC_RS02905 PF07729 FCD domain SHYC_RS02910 PF00480 ROK family SHYC_RS02915 PF02632 BioY family SHYC_RS02920 PF13673 Acetyltransferase (GNAT) domain SHYC_RS02925 PF02634 FdhD/NarQ family SHYC_RS02930 PF13531 Bacterial extracellular solute-binding protein SHYC_RS02935 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS02940 PF00005 ABC transporter SHYC_RS02945 PF00899 ThiF family SHYC_RS02950 PF00994 Probable molybdopterin binding domain SHYC_RS02955 PF01967 MoaC family SHYC_RS02960 PF00994 Probable molybdopterin binding domain SHYC_RS02960 PF03453 MoeA N-terminal region (domain I and II) SHYC_RS02960 PF03454 MoeA C-terminal region (domain IV) SHYC_RS02965 PF03205 Molybdopterin guanine dinucleotide synthesis protein B SHYC_RS02970 PF02391 MoaE protein SHYC_RS02975 PF02597 ThiS family SHYC_RS02980 PF12804 MobA-like NTP transferase domain SHYC_RS02985 PF04055 Radical SAM superfamily SHYC_RS02985 PF06463 Molybdenum Cofactor Synthesis C SHYC_RS02985 PF13353 4Fe-4S single cluster domain SHYC_RS02990 PF03372 Endonuclease/Exonuclease/phosphatase family SHYC_RS02995 PF01047 MarR family SHYC_RS03000 PF13468 Glyoxalase-like domain SHYC_RS03010 PF02388 FemAB family SHYC_RS03015 PF00873 AcrB/AcrD/AcrF family SHYC_RS03020 PF00155 Aminotransferase class I and II SHYC_RS03035 PF03547 SHYC_RS03035 SHYC_RS03040 PF13673 Acetyltransferase (GNAT) domain SHYC_RS03045 PF01131 DNA topoisomerase SHYC_RS03045 PF01751 Toprim domain SHYC_RS03050 PF00860 Permease family SHYC_RS03055 PF00338 Ribosomal protein S10p/S20e SHYC_RS03060 PF00297 Ribosomal protein L3 SHYC_RS03065 PF00573 Ribosomal protein L4/L1 family SHYC_RS03070 PF00276 Ribosomal protein L23 SHYC_RS03075 PF00181 Ribosomal Proteins L2, RNA binding domain SHYC_RS03075 PF03947 Ribosomal Proteins L2, C-terminal domain SHYC_RS03080 PF00203 Ribosomal protein S19 SHYC_RS03085 PF00237 Ribosomal protein L22p/L17e SHYC_RS03090 PF00189 Ribosomal protein S3, C-terminal domain SHYC_RS03090 PF07650 KH domain SHYC_RS03095 PF00252 Ribosomal protein L16p/L10e SHYC_RS03100 PF00831 Ribosomal L29 protein SHYC_RS03105 PF00366 Ribosomal protein S17 SHYC_RS03110 PF00238 Ribosomal protein L14p/L23e SHYC_RS03115 PF00467 KOW motif SHYC_RS03115 PF17136 SHYC_RS03115 SHYC_RS03120 PF00281 Ribosomal protein L5 SHYC_RS03120 PF00673 ribosomal L5P family C-terminus SHYC_RS03125 PF00253 Ribosomal protein S14p/S29e SHYC_RS03130 PF00410 Ribosomal protein S8 SHYC_RS03135 PF00347 Ribosomal protein L6 SHYC_RS03140 PF00861 Ribosomal L18p/L5e family SHYC_RS03145 PF00333 Ribosomal protein S5, N-terminal domain SHYC_RS03145 PF03719 Ribosomal protein S5, C-terminal domain SHYC_RS03150 PF00327 Ribosomal protein L30p/L7e SHYC_RS03155 PF00828 Ribosomal protein L18e/L15 SHYC_RS03160 PF00344 SecY translocase SHYC_RS03165 PF00406 Adenylate kinase SHYC_RS03165 PF05191 Adenylate kinase, active site lid SHYC_RS03170 PF01176 Translation initiation factor 1A / IF-1 SHYC_RS03175 PF00444 Ribosomal protein L36 SHYC_RS03180 PF00416 Ribosomal protein S13/S18 SHYC_RS03185 PF00411 Ribosomal protein S11 SHYC_RS03190 PF01000 RNA polymerase Rpb3/RpoA insert domain SHYC_RS03190 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain SHYC_RS03190 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain SHYC_RS03195 PF01196 Ribosomal protein L17 SHYC_RS03200 PF00005 ABC transporter SHYC_RS03205 PF00005 ABC transporter SHYC_RS03210 PF02361 Cobalt transport protein SHYC_RS03215 PF01416 tRNA pseudouridine synthase SHYC_RS03220 PF00572 Ribosomal protein L13 SHYC_RS03225 PF00380 Ribosomal protein S9/S16 SHYC_RS03230 PF10026 SHYC_RS03230 SHYC_RS03235 PF07739 TipAS antibiotic-recognition domain SHYC_RS03235 PF13411 MerR HTH family regulatory protein SHYC_RS03240 PF13649 Methyltransferase domain SHYC_RS03250 PF05116 Sucrose-6F-phosphate phosphohydrolase SHYC_RS03260 PF00455 SHYC_RS03260 SHYC_RS03260 PF08220 DeoR-like helix-turn-helix domain SHYC_RS03265 PF02502 Ribose/Galactose Isomerase SHYC_RS03270 PF02502 Ribose/Galactose Isomerase SHYC_RS03275 PF01791 DeoC/LacD family aldolase SHYC_RS03280 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit SHYC_RS03285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SHYC_RS03285 PF02378 Phosphotransferase system, EIIC SHYC_RS03290 PF00232 Glycosyl hydrolase family 1 SHYC_RS03295 PF00107 Zinc-binding dehydrogenase SHYC_RS03295 PF08240 Alcohol dehydrogenase GroES-like domain SHYC_RS03300 PF02028 BCCT family transporter SHYC_RS03305 PF07690 Major Facilitator Superfamily SHYC_RS03310 PF04183 IucA / IucC family SHYC_RS03310 PF06276 Ferric iron reductase FhuF-like transporter SHYC_RS03315 PF05977 Transmembrane secretion effector SHYC_RS03320 PF04183 IucA / IucC family SHYC_RS03320 PF06276 Ferric iron reductase FhuF-like transporter SHYC_RS03325 PF01168 Alanine racemase, N-terminal domain SHYC_RS03330 PF01497 Periplasmic binding protein SHYC_RS03335 PF01032 FecCD transport family SHYC_RS03340 PF01032 FecCD transport family SHYC_RS03350 PF04307 SHYC_RS03350 SHYC_RS03355 PF01704 UTP--glucose-1-phosphate uridylyltransferase SHYC_RS03360 PF03006 SHYC_RS03360 SHYC_RS03365 PF07690 Major Facilitator Superfamily SHYC_RS03370 PF17080 SHYC_RS03370 SHYC_RS03375 PF07690 Major Facilitator Superfamily SHYC_RS03380 PF10609 ParA/MinD ATPase like SHYC_RS03430 PF00491 Arginase family SHYC_RS03435 PF02457 DisA bacterial checkpoint controller nucleotide-binding SHYC_RS03440 PF07949 YbbR-like protein SHYC_RS03445 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SHYC_RS03445 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SHYC_RS03445 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SHYC_RS03445 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SHYC_RS03450 PF01380 SIS domain SHYC_RS03450 PF13522 Glutamine amidotransferase domain SHYC_RS03455 PF00005 ABC transporter SHYC_RS03460 PF08282 haloacid dehalogenase-like hydrolase SHYC_RS03470 PF00392 Bacterial regulatory proteins, gntR family SHYC_RS03470 PF07729 FCD domain SHYC_RS03475 PF01238 Phosphomannose isomerase type I SHYC_RS03485 PF01878 EVE domain SHYC_RS03490 PF03553 SHYC_RS03490 SHYC_RS03495 PF04134 SHYC_RS03495 SHYC_RS03500 PF01048 Phosphorylase superfamily SHYC_RS03505 PF00591 Glycosyl transferase family, a/b domain SHYC_RS03505 PF02885 Glycosyl transferase family, helical bundle domain SHYC_RS03505 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain SHYC_RS03515 PF02664 S-Ribosylhomocysteinase (LuxS) SHYC_RS03520 PF01546 Peptidase family M20/M25/M40 SHYC_RS03520 PF07687 Peptidase dimerisation domain SHYC_RS03530 PF11042 SHYC_RS03530 SHYC_RS03535 PF03630 Fumble SHYC_RS03540 PF06983 3-demethylubiquinone-9 3-methyltransferase SHYC_RS03545 PF02028 BCCT family transporter SHYC_RS03550 PF00583 Acetyltransferase (GNAT) family SHYC_RS03555 PF05066 HB1, ASXL, restriction endonuclease HTH domain SHYC_RS03560 PF00117 Glutamine amidotransferase class-I SHYC_RS03560 PF06418 CTP synthase N-terminus SHYC_RS03565 PF10740 Protein of unknown function (DUF2529) SHYC_RS03570 PF01116 Fructose-bisphosphate aldolase class-II SHYC_RS03575 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SHYC_RS03580 PF01638 HxlR-like helix-turn-helix SHYC_RS03585 PF00171 Aldehyde dehydrogenase family SHYC_RS03590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SHYC_RS03590 PF07497 Rho termination factor, RNA-binding domain SHYC_RS03590 PF07498 Rho termination factor, N-terminal domain SHYC_RS03595 PF01197 Ribosomal protein L31 SHYC_RS03600 PF00265 Thymidine kinase SHYC_RS03605 PF00472 RF-1 domain SHYC_RS03605 PF03462 PCRF domain SHYC_RS03610 PF05175 Methyltransferase small domain SHYC_RS03615 PF01300 Telomere recombination SHYC_RS03615 PF03481 Putative GTP-binding controlling metal-binding SHYC_RS03620 PF01451 Low molecular weight phosphotyrosine protein phosphatase SHYC_RS03625 PF04260 Protein of unknown function (DUF436) SHYC_RS03630 PF00464 Serine hydroxymethyltransferase SHYC_RS03635 PF14681 Uracil phosphoribosyltransferase SHYC_RS03640 PF02350 UDP-N-acetylglucosamine 2-epimerase SHYC_RS03645 PF03899 SHYC_RS03645 SHYC_RS03650 PF00119 ATP synthase A chain SHYC_RS03655 PF00137 ATP synthase subunit C SHYC_RS03660 PF00430 ATP synthase B/B' CF(0) SHYC_RS03665 PF00213 ATP synthase delta (OSCP) subunit SHYC_RS03670 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SHYC_RS03670 PF00306 ATP synthase alpha/beta chain, C terminal domain SHYC_RS03670 PF02874 ATP synthase alpha/beta family, beta-barrel domain SHYC_RS03675 PF00231 ATP synthase SHYC_RS03680 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain SHYC_RS03680 PF02874 ATP synthase alpha/beta family, beta-barrel domain SHYC_RS03685 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain SHYC_RS03685 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain SHYC_RS03690 PF06612 SHYC_RS03690 SHYC_RS03695 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SHYC_RS03700 PF11772 SHYC_RS03700 SHYC_RS03705 PF07977 FabA-like domain SHYC_RS03710 PF14183 SHYC_RS03710 SHYC_RS03715 PF00436 Single-strand binding protein family SHYC_RS03720 PF01476 LysM domain SHYC_RS03725 PF03070 TENA/THI-4/PQQC family SHYC_RS03730 PF08543 Phosphomethylpyrimidine kinase SHYC_RS03735 PF02110 Hydroxyethylthiazole kinase family SHYC_RS03740 PF02581 Thiamine monophosphate synthase/TENI SHYC_RS03745 PF02096 60Kd inner membrane protein SHYC_RS03750 PF01966 HD domain SHYC_RS03755 PF13091 PLD-like domain SHYC_RS03755 PF13396 SHYC_RS03755 SHYC_RS03760 PF02583 Metal-sensitive transcriptional repressor SHYC_RS03770 PF00403 Heavy-metal-associated domain SHYC_RS03775 PF00122 E1-E2 ATPase SHYC_RS03775 PF00403 Heavy-metal-associated domain SHYC_RS03775 PF00702 haloacid dehalogenase-like hydrolase SHYC_RS03780 PF01098 SHYC_RS03780 SHYC_RS03785 PF01820 D-ala D-ala ligase N-terminus SHYC_RS03785 PF07478 D-ala D-ala ligase C-terminus SHYC_RS03790 PF01225 Mur ligase family, catalytic domain SHYC_RS03790 PF02875 Mur ligase family, glutamate ligase domain SHYC_RS03790 PF08245 Mur ligase middle domain SHYC_RS03795 PF00270 DEAD/DEAH box helicase SHYC_RS03795 PF00271 Helicase conserved C-terminal domain SHYC_RS03805 PF03703 SHYC_RS03805 SHYC_RS03810 PF03703 SHYC_RS03810 SHYC_RS03815 PF01648 4'-phosphopantetheinyl transferase superfamily SHYC_RS03820 PF00842 Alanine racemase, C-terminal domain SHYC_RS03820 PF01168 Alanine racemase, N-terminal domain SHYC_RS03830 PF02452 PemK-like protein SHYC_RS03835 PF07228 Stage II sporulation protein E (SpoIIE) SHYC_RS03835 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain SHYC_RS03840 PF01740 STAS domain SHYC_RS03845 PF13581 Histidine kinase-like ATPase domain SHYC_RS03850 PF04539 Sigma-70 region 3 SHYC_RS03850 PF04542 Sigma-70 region 2 SHYC_RS03850 PF04545 Sigma-70, region 4 SHYC_RS03855 PF00575 S1 RNA binding domain SHYC_RS03855 PF09371 Tex-like protein N-terminal domain SHYC_RS03855 PF12836 Helix-hairpin-helix motif SHYC_RS03855 PF16921 SHYC_RS03855 SHYC_RS03860 PF10263 SHYC_RS03860 SHYC_RS03890 PF00291 Pyridoxal-phosphate dependent enzyme SHYC_RS03890 PF00585 C-terminal regulatory domain of Threonine dehydratase SHYC_RS03895 PF00694 Aconitase C-terminal domain SHYC_RS03900 PF00330 Aconitase family (aconitate hydratase) SHYC_RS03905 PF00180 Isocitrate/isopropylmalate dehydrogenase SHYC_RS03910 PF00682 HMGL-like SHYC_RS03910 PF08502 LeuA allosteric (dimerisation) domain SHYC_RS03915 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain SHYC_RS03915 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain SHYC_RS03920 PF01842 ACT domain SHYC_RS03920 PF10369 Small subunit of acetolactate synthase SHYC_RS03925 PF00205 Thiamine pyrophosphate enzyme, central domain SHYC_RS03925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SHYC_RS03925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SHYC_RS03930 PF00920 Dehydratase family SHYC_RS03935 PF02367 Uncharacterised P-loop hydrolase UPF0079 SHYC_RS03940 PF00814 Glycoprotease family SHYC_RS03945 PF00583 Acetyltransferase (GNAT) family SHYC_RS03950 PF00814 Glycoprotease family SHYC_RS03965 PF00005 ABC transporter SHYC_RS03965 PF12848 ABC transporter SHYC_RS03965 PF16326 SHYC_RS03965 SHYC_RS03970 PF02629 CoA binding domain SHYC_RS03970 PF06971 Putative DNA-binding protein N-terminus SHYC_RS03975 PF04143 SHYC_RS03975 SHYC_RS03980 PF01206 Sulfurtransferase TusA SHYC_RS03985 PF00251 Glycosyl hydrolases family 32 N-terminal domain SHYC_RS03985 PF08244 Glycosyl hydrolases family 32 C terminal SHYC_RS03990 PF00072 Response regulator receiver domain SHYC_RS03990 PF04397 LytTr DNA-binding domain SHYC_RS03995 PF14501 GHKL domain SHYC_RS04000 PF05931 SHYC_RS04000 SHYC_RS04005 PF04647 SHYC_RS04005 SHYC_RS04010 PF00795 Carbon-nitrogen hydrolase SHYC_RS04020 PF02517 CAAX protease self-immunity SHYC_RS04025 PF00166 Chaperonin 10 Kd subunit SHYC_RS04030 PF00118 TCP-1/cpn60 chaperonin family SHYC_RS04040 PF04266 ASCH domain SHYC_RS04045 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain SHYC_RS04050 PF04055 Radical SAM superfamily SHYC_RS04055 PF00155 Aminotransferase class I and II SHYC_RS04065 PF00005 ABC transporter SHYC_RS04075 PF00392 Bacterial regulatory proteins, gntR family SHYC_RS04075 PF07729 FCD domain SHYC_RS04080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain SHYC_RS04080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain SHYC_RS04085 PF02447 SHYC_RS04085 SHYC_RS04090 PF09954 SHYC_RS04090 SHYC_RS04095 PF14595 Thioredoxin SHYC_RS04100 PF08006 SHYC_RS04100 SHYC_RS04105 PF13349 SHYC_RS04105 SHYC_RS04110 PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase SHYC_RS04125 PF10282 Lactonase, 7-bladed beta-propeller SHYC_RS04130 PF00171 Aldehyde dehydrogenase family SHYC_RS04135 PF14542 GCN5-related N-acetyl-transferase SHYC_RS04140 PF01368 DHH family SHYC_RS04140 PF02833 DHHA2 domain SHYC_RS04145 PF00857 Isochorismatase family SHYC_RS04150 PF12708 Pectate lyase superfamily protein SHYC_RS04155 PF00800 Prephenate dehydratase SHYC_RS04160 PF02898 Nitric oxide synthase, oxygenase domain SHYC_RS04165 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family SHYC_RS04170 PF02540 NAD synthase SHYC_RS04175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SHYC_RS04180 PF14044 SHYC_RS04180 SHYC_RS04185 PF00206 Lyase SHYC_RS04185 PF10397 Adenylosuccinate lyase C-terminus SHYC_RS04190 PF01371 Trp repressor protein SHYC_RS04195 PF01884 PcrB family SHYC_RS04200 PF00580 UvrD/REP helicase N-terminal domain SHYC_RS04200 PF13361 UvrD-like helicase C-terminal domain SHYC_RS04205 PF00533 BRCA1 C Terminus (BRCT) domain SHYC_RS04205 PF01653 NAD-dependent DNA ligase adenylation domain SHYC_RS04205 PF03119 NAD-dependent DNA ligase C4 zinc finger domain SHYC_RS04205 PF03120 NAD-dependent DNA ligase OB-fold domain SHYC_RS04205 PF12826 Helix-hairpin-helix motif SHYC_RS04205 PF14520 Helix-hairpin-helix domain SHYC_RS04210 PF07537 CamS sex pheromone cAM373 precursor SHYC_RS04215 PF00474 Sodium:solute symporter family SHYC_RS04220 PF02686 Glu-tRNAGln amidotransferase C subunit SHYC_RS04225 PF01425 Amidase SHYC_RS04230 PF02637 GatB domain SHYC_RS04230 PF02934 GatB/GatE catalytic domain SHYC_RS04235 PF00781 Diacylglycerol kinase catalytic domain SHYC_RS04240 PF05958 tRNA (Uracil-5-)-methyltransferase SHYC_RS04245 PF00135 Carboxylesterase family SHYC_RS04250 PF11667 SHYC_RS04250 SHYC_RS04255 PF00817 impB/mucB/samB family SHYC_RS04255 PF11799 impB/mucB/samB family C-terminal domain SHYC_RS04260 PF00929 Exonuclease SHYC_RS04265 PF00210 Ferritin-like domain SHYC_RS04270 PF08245 Mur ligase middle domain SHYC_RS04270 PF08353 SHYC_RS04270 SHYC_RS04275 PF07685 CobB/CobQ-like glutamine amidotransferase domain SHYC_RS04280 PF06081 SHYC_RS04280 SHYC_RS04285 PF00557 Metallopeptidase family M24 SHYC_RS04295 PF09922 Cell wall-active antibiotics response protein (DUF2154) SHYC_RS04300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS04300 PF07730 Histidine kinase SHYC_RS04305 PF00072 Response regulator receiver domain SHYC_RS04305 PF00196 Bacterial regulatory proteins, luxR family SHYC_RS04310 PF00484 Carbonic anhydrase SHYC_RS04315 PF03631 SHYC_RS04315 SHYC_RS04325 PF01451 Low molecular weight phosphotyrosine protein phosphatase SHYC_RS04330 PF06569 SHYC_RS04330 SHYC_RS04335 PF02073 Thermophilic metalloprotease (M29) SHYC_RS04340 PF03061 Thioesterase superfamily SHYC_RS04345 PF04055 Radical SAM superfamily SHYC_RS04345 PF08756 SHYC_RS04345 SHYC_RS04345 PF13394 4Fe-4S single cluster domain SHYC_RS04350 PF01965 DJ-1/PfpI family SHYC_RS04355 PF01548 SHYC_RS04355 SHYC_RS04355 PF02371 SHYC_RS04355 SHYC_RS04360 PF00205 Thiamine pyrophosphate enzyme, central domain SHYC_RS04360 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SHYC_RS04360 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SHYC_RS04365 PF00912 Transglycosylase SHYC_RS04370 PF02631 RecX family SHYC_RS04375 PF08838 Protein of unknown function (DUF1811) SHYC_RS04380 PF00005 ABC transporter SHYC_RS04390 PF04307 SHYC_RS04390 SHYC_RS04395 PF00730 HhH-GPD superfamily base excision DNA repair protein SHYC_RS04395 PF14815 NUDIX domain SHYC_RS04400 PF04167 Protein of unknown function (DUF402) SHYC_RS04405 PF00005 ABC transporter SHYC_RS04405 PF00664 ABC transporter transmembrane region SHYC_RS04410 PF01645 Conserved region in glutamate synthase SHYC_RS04415 PF06081 SHYC_RS04415 SHYC_RS04420 PF00202 Aminotransferase class-III SHYC_RS04425 PF00578 AhpC/TSA family SHYC_RS04430 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SHYC_RS04430 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SHYC_RS04435 PF01475 Ferric uptake regulator family SHYC_RS04580 PF13303 SHYC_RS04580 SHYC_RS04585 PF00497 Bacterial extracellular solute-binding proteins, family 3 SHYC_RS04585 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS04590 PF00005 ABC transporter SHYC_RS04595 PF08331 SHYC_RS04595 SHYC_RS04595 PF13484 SHYC_RS04595 SHYC_RS04595 PF13646 HEAT repeats SHYC_RS04600 PF00588 SpoU rRNA Methylase family SHYC_RS04605 PF01979 Amidohydrolase family SHYC_RS04620 PF00206 Lyase SHYC_RS04620 PF10415 Fumarase C C-terminus SHYC_RS04625 PF02541 Ppx/GppA phosphatase family SHYC_RS04630 PF02503 Polyphosphate kinase middle domain SHYC_RS04630 PF13089 Polyphosphate kinase N-terminal domain SHYC_RS04630 PF13090 Polyphosphate kinase C-terminal domain SHYC_RS04635 PF00849 RNA pseudouridylate synthase SHYC_RS04640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS04640 PF07730 Histidine kinase SHYC_RS04640 PF13185 GAF domain SHYC_RS04645 PF00072 Response regulator receiver domain SHYC_RS04645 PF00196 Bacterial regulatory proteins, luxR family SHYC_RS04650 PF00746 SHYC_RS04650 SHYC_RS04650 PF04650 SHYC_RS04650 SHYC_RS04650 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SHYC_RS04655 PF01545 Cation efflux family SHYC_RS04655 PF16916 SHYC_RS04655 SHYC_RS04660 PF04650 SHYC_RS04660 SHYC_RS04665 PF00717 Peptidase S24-like SHYC_RS04670 PF00375 Sodium:dicarboxylate symporter family SHYC_RS04685 PF00375 Sodium:dicarboxylate symporter family SHYC_RS04700 PF01520 N-acetylmuramoyl-L-alanine amidase SHYC_RS04700 PF05257 CHAP domain SHYC_RS04700 PF08460 Bacterial SH3 domain SHYC_RS04715 PF04688 SHYC_RS04715 SHYC_RS04725 PF13884 Chaperone of endosialidase SHYC_RS04745 PF01551 Peptidase family M23 SHYC_RS04745 PF10145 SHYC_RS04745 SHYC_RS04750 PF00589 Phage integrase family SHYC_RS04750 PF13495 Phage integrase, N-terminal SAM-like domain SHYC_RS04820 PF03237 Terminase-like family SHYC_RS04830 PF12850 Calcineurin-like phosphoesterase superfamily domain SHYC_RS04835 PF09642 YonK protein SHYC_RS04840 PF00216 Bacterial DNA-binding protein SHYC_RS04850 PF13538 UvrD-like helicase C-terminal domain SHYC_RS04850 PF13604 AAA domain SHYC_RS04850 PF14490 Helix-hairpin-helix containing domain SHYC_RS04865 PF13462 Thioredoxin SHYC_RS04905 PF00589 Phage integrase family SHYC_RS04940 PF13479 SHYC_RS04940 SHYC_RS04950 PF03796 DnaB-like helicase C terminal domain SHYC_RS04960 PF01368 DHH family SHYC_RS04980 PF09643 YopX protein SHYC_RS05045 PF13365 Trypsin-like peptidase domain SHYC_RS05050 PF00089 Trypsin SHYC_RS05055 PF00089 Trypsin SHYC_RS05065 PF03496 ADP-ribosyltransferase exoenzyme SHYC_RS05075 PF00817 impB/mucB/samB family SHYC_RS05075 PF11798 IMS family HHH motif SHYC_RS05075 PF11799 impB/mucB/samB family C-terminal domain SHYC_RS05085 PF15526 Putative toxin 46 SHYC_RS05090 PF00082 Subtilase family SHYC_RS05120 PF00149 Calcineurin-like phosphoesterase SHYC_RS05140 PF01068 ATP dependent DNA ligase domain SHYC_RS05140 PF14743 DNA ligase OB-like domain SHYC_RS05150 PF00565 Staphylococcal nuclease homologue SHYC_RS05175 PF02005 N2,N2-dimethylguanosine tRNA methyltransferase SHYC_RS05185 PF00145 C-5 cytosine-specific DNA methylase SHYC_RS05190 PF00145 C-5 cytosine-specific DNA methylase SHYC_RS05205 PF01145 SPFH domain / Band 7 family SHYC_RS05210 PF04193 PQ loop repeat SHYC_RS05215 PF05565 SHYC_RS05215 SHYC_RS05225 PF07972 NrdI Flavodoxin like SHYC_RS05230 PF00317 Ribonucleotide reductase, all-alpha domain SHYC_RS05230 PF02867 Ribonucleotide reductase, barrel domain SHYC_RS05230 PF08343 Ribonucleotide reductase N-terminal SHYC_RS05230 PF14528 LAGLIDADG-like domain SHYC_RS05230 PF14890 Intein splicing domain SHYC_RS05235 PF00268 Ribonucleotide reductase, small chain SHYC_RS05240 PF04275 Phosphomevalonate kinase SHYC_RS05240 PF13238 AAA domain SHYC_RS05245 PF00462 Glutaredoxin SHYC_RS05255 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase SHYC_RS05265 PF05866 Endodeoxyribonuclease RusA SHYC_RS05270 PF13921 Myb-like DNA-binding domain SHYC_RS05275 PF00239 Resolvase, N terminal domain SHYC_RS05275 PF07508 Recombinase SHYC_RS05280 PF00375 Sodium:dicarboxylate symporter family SHYC_RS05290 PF13462 Thioredoxin SHYC_RS05295 PF04650 SHYC_RS05295 SHYC_RS05295 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SHYC_RS05310 PF01381 Helix-turn-helix SHYC_RS05315 PF04286 SHYC_RS05315 SHYC_RS05320 PF06133 Protein of unknown function (DUF964) SHYC_RS05325 PF00149 Calcineurin-like phosphoesterase SHYC_RS05330 PF13514 AAA domain SHYC_RS05335 PF01336 OB-fold nucleic acid binding domain SHYC_RS05335 PF01966 HD domain SHYC_RS05340 PF13616 PPIC-type PPIASE domain SHYC_RS05345 PF11667 SHYC_RS05345 SHYC_RS05350 PF01047 MarR family SHYC_RS05360 PF01230 HIT domain SHYC_RS05365 PF00005 ABC transporter SHYC_RS05370 PF05975 SHYC_RS05370 SHYC_RS05380 PF01208 Uroporphyrinogen decarboxylase (URO-D) SHYC_RS05385 PF00762 Ferrochelatase SHYC_RS05390 PF01593 Flavin containing amine oxidoreductase SHYC_RS05395 PF06821 Serine hydrolase SHYC_RS05465 PF13367 SHYC_RS05465 SHYC_RS05470 PF13367 SHYC_RS05470 SHYC_RS05480 PF10031 SHYC_RS05480 SHYC_RS05485 PF03780 SHYC_RS05485 SHYC_RS05495 PF00501 AMP-binding enzyme SHYC_RS05495 PF13193 AMP-binding enzyme C-terminal domain SHYC_RS05500 PF13378 Enolase C-terminal domain-like SHYC_RS05505 PF01809 SHYC_RS05505 SHYC_RS05510 PF00293 NUDIX domain SHYC_RS05515 PF00326 Prolyl oligopeptidase family SHYC_RS05520 PF01293 Phosphoenolpyruvate carboxykinase SHYC_RS05525 PF00438 S-adenosylmethionine synthetase, N-terminal domain SHYC_RS05525 PF02772 S-adenosylmethionine synthetase, central domain SHYC_RS05525 PF02773 S-adenosylmethionine synthetase, C-terminal domain SHYC_RS05530 PF08378 SHYC_RS05530 SHYC_RS05535 PF00248 Aldo/keto reductase family SHYC_RS05540 PF02537 SHYC_RS05540 SHYC_RS05545 PF02537 SHYC_RS05545 SHYC_RS05555 PF00923 Transaldolase SHYC_RS05570 PF04542 Sigma-70 region 2 SHYC_RS05580 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SHYC_RS05585 PF13454 FAD-NAD(P)-binding SHYC_RS05590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SHYC_RS05590 PF01872 RibD C-terminal domain SHYC_RS05595 PF00677 Lumazine binding domain SHYC_RS05600 PF00925 GTP cyclohydrolase II SHYC_RS05600 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase SHYC_RS05605 PF00885 6,7-dimethyl-8-ribityllumazine synthase SHYC_RS05610 PF01619 Proline dehydrogenase SHYC_RS05620 PF12146 Putative lysophospholipase SHYC_RS05625 PF00056 lactate/malate dehydrogenase, NAD binding domain SHYC_RS05625 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SHYC_RS05630 PF01047 MarR family SHYC_RS05635 PF06962 Putative rRNA methylase SHYC_RS05640 PF04055 Radical SAM superfamily SHYC_RS05640 PF16199 SHYC_RS05640 SHYC_RS05645 PF07690 Major Facilitator Superfamily SHYC_RS05650 PF00133 tRNA synthetases class I (I, L, M and V) SHYC_RS05650 PF08264 Anticodon-binding domain of tRNA SHYC_RS05650 PF09334 tRNA synthetases class I (M) SHYC_RS05650 PF13603 Leucyl-tRNA synthetase, Domain 2 SHYC_RS05655 PF00581 Rhodanese-like domain SHYC_RS05665 PF03486 HI0933-like protein SHYC_RS05670 PF01943 SHYC_RS05670 SHYC_RS05670 PF14667 Polysaccharide biosynthesis C-terminal domain SHYC_RS05675 PF00849 RNA pseudouridylate synthase SHYC_RS05675 PF01479 S4 domain SHYC_RS05685 PF01546 Peptidase family M20/M25/M40 SHYC_RS05685 PF07687 Peptidase dimerisation domain SHYC_RS05690 PF01063 Aminotransferase class IV SHYC_RS05695 PF01636 Phosphotransferase enzyme family SHYC_RS05700 PF02390 Putative methyltransferase SHYC_RS05705 PF00753 Metallo-beta-lactamase superfamily SHYC_RS05715 PF05343 M42 glutamyl aminopeptidase SHYC_RS05720 PF00085 Thioredoxin SHYC_RS05725 PF07285 SHYC_RS05725 SHYC_RS05730 PF01588 Putative tRNA binding domain SHYC_RS05730 PF14794 Domain of unknown function (DUF4479) SHYC_RS05735 PF01580 FtsK/SpoIIIE family SHYC_RS05735 PF09397 Ftsk gamma domain SHYC_RS05740 PF01225 Mur ligase family, catalytic domain SHYC_RS05740 PF02875 Mur ligase family, glutamate ligase domain SHYC_RS05740 PF08245 Mur ligase middle domain SHYC_RS05745 PF06103 SHYC_RS05745 SHYC_RS05755 PF00793 DAHP synthetase I family SHYC_RS05755 PF01817 Chorismate mutase type II SHYC_RS05760 PF00356 Bacterial regulatory proteins, lacI family SHYC_RS05760 PF13377 Periplasmic binding protein-like domain SHYC_RS05765 PF00850 Histone deacetylase domain SHYC_RS05775 PF00501 AMP-binding enzyme SHYC_RS05775 PF13193 AMP-binding enzyme C-terminal domain SHYC_RS05780 PF01268 Formate--tetrahydrofolate ligase SHYC_RS05785 PF00912 Transglycosylase SHYC_RS05790 PF00579 tRNA synthetases class I (W and Y) SHYC_RS05790 PF01479 S4 domain SHYC_RS05795 PF13180 PDZ domain SHYC_RS05795 PF13365 Trypsin-like peptidase domain SHYC_RS05800 PF01553 Acyltransferase SHYC_RS05805 PF13242 HAD-hyrolase-like SHYC_RS05810 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SHYC_RS05810 PF01842 ACT domain SHYC_RS05810 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SHYC_RS05815 PF00266 Aminotransferase class-V SHYC_RS05820 PF02566 OsmC-like protein SHYC_RS05825 PF03009 Glycerophosphoryl diester phosphodiesterase family SHYC_RS05830 PF02423 Ornithine cyclodeaminase/mu-crystallin family SHYC_RS05835 PF00163 Ribosomal protein S4/S9 N-terminal domain SHYC_RS05835 PF01479 S4 domain SHYC_RS05840 PF01590 GAF domain SHYC_RS05845 PF06160 SHYC_RS05845 SHYC_RS05850 PF00266 Aminotransferase class-V SHYC_RS05855 PF02568 Thiamine biosynthesis protein (ThiI) SHYC_RS05855 PF02926 THUMP domain SHYC_RS05860 PF01925 SHYC_RS05860 SHYC_RS05865 PF01343 Peptidase family S49 SHYC_RS05870 PF06271 SHYC_RS05870 SHYC_RS05875 PF08534 Redoxin SHYC_RS05880 PF02384 N-6 DNA Methylase SHYC_RS05885 PF00871 Acetokinase family SHYC_RS05890 PF00582 Universal stress protein family SHYC_RS05895 PF01262 Alanine dehydrogenase/PNT, C-terminal domain SHYC_RS05895 PF05222 Alanine dehydrogenase/PNT, N-terminal domain SHYC_RS05900 PF00557 Metallopeptidase family M24 SHYC_RS05900 PF01321 Creatinase/Prolidase N-terminal domain SHYC_RS05905 PF13483 Beta-lactamase superfamily domain SHYC_RS05910 PF00582 Universal stress protein family SHYC_RS05915 PF00392 Bacterial regulatory proteins, gntR family SHYC_RS05915 PF00571 CBS domain SHYC_RS05915 PF07085 DRTGG domain SHYC_RS05920 PF01368 DHH family SHYC_RS05920 PF02272 DHHA1 domain SHYC_RS05925 PF02811 PHP domain SHYC_RS05925 PF07733 Bacterial DNA polymerase III alpha subunit SHYC_RS05925 PF14579 Helix-hairpin-helix motif SHYC_RS05930 PF00390 Malic enzyme, N-terminal domain SHYC_RS05930 PF03949 Malic enzyme, NAD binding domain SHYC_RS05935 PF01039 Carboxyl transferase domain SHYC_RS05940 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit SHYC_RS05945 PF00365 Phosphofructokinase SHYC_RS05950 PF00224 Pyruvate kinase, barrel domain SHYC_RS05950 PF00391 PEP-utilising enzyme, mobile domain SHYC_RS05950 PF02887 Pyruvate kinase, alpha/beta domain SHYC_RS05955 PF00285 Citrate synthase SHYC_RS05960 PF00180 Isocitrate/isopropylmalate dehydrogenase SHYC_RS05965 PF00072 Response regulator receiver domain SHYC_RS05965 PF00486 Transcriptional regulatory protein, C terminal SHYC_RS05970 PF00512 His Kinase A (phospho-acceptor) domain SHYC_RS05970 PF00989 PAS fold SHYC_RS05970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS05975 PF00476 DNA polymerase family A SHYC_RS05975 PF01367 5'-3' exonuclease, C-terminal SAM fold SHYC_RS05975 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SHYC_RS05980 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain SHYC_RS05980 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain SHYC_RS05985 PF01121 Dephospho-CoA kinase SHYC_RS05990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SHYC_RS05990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SHYC_RS05995 PF03477 ATP cone domain SHYC_RS06000 PF07261 Replication initiation and membrane attachment SHYC_RS06005 PF01695 IstB-like ATP binding protein SHYC_RS06005 PF07319 Primosomal protein DnaI N-terminus SHYC_RS06010 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SHYC_RS06010 PF02824 TGS domain SHYC_RS06010 PF03129 Anticodon binding domain SHYC_RS06010 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SHYC_RS06015 PF00324 Amino acid permease SHYC_RS06020 PF00707 Translation initiation factor IF-3, C-terminal domain SHYC_RS06020 PF05198 Translation initiation factor IF-3, N-terminal domain SHYC_RS06025 PF01632 Ribosomal protein L35 SHYC_RS06030 PF00453 Ribosomal protein L20 SHYC_RS06035 PF00293 NUDIX domain SHYC_RS06045 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase SHYC_RS06045 PF05697 Bacterial trigger factor protein (TF) SHYC_RS06045 PF05698 Bacterial trigger factor protein (TF) C-terminus SHYC_RS06050 PF06689 ClpX C4-type zinc finger SHYC_RS06050 PF07724 AAA domain (Cdc48 subfamily) SHYC_RS06050 PF10431 C-terminal, D2-small domain, of ClpB protein SHYC_RS06055 PF01926 50S ribosome-binding GTPase SHYC_RS06060 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain SHYC_RS06060 PF01488 Shikimate / quinate 5-dehydrogenase SHYC_RS06060 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain SHYC_RS06065 PF01578 SHYC_RS06065 SHYC_RS06070 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain SHYC_RS06070 PF03900 Porphobilinogen deaminase, C-terminal domain SHYC_RS06075 PF02602 Uroporphyrinogen-III synthase HemD SHYC_RS06080 PF00490 Delta-aminolevulinic acid dehydratase SHYC_RS06085 PF00202 Aminotransferase class-III SHYC_RS06090 PF05145 SHYC_RS06090 SHYC_RS06095 PF03352 Methyladenine glycosylase SHYC_RS06100 PF00133 tRNA synthetases class I (I, L, M and V) SHYC_RS06100 PF08264 Anticodon-binding domain of tRNA SHYC_RS06100 PF10458 Valyl tRNA synthetase tRNA binding arm SHYC_RS06105 PF08245 Mur ligase middle domain SHYC_RS06115 PF04002 RadC-like JAB domain SHYC_RS06120 PF16284 SHYC_RS06120 SHYC_RS06125 PF04085 rod shape-determining protein MreC SHYC_RS06130 PF04093 SHYC_RS06130 SHYC_RS06135 PF00829 Ribosomal prokaryotic L21 protein SHYC_RS06140 PF04327 Protein of unknown function (DUF464) SHYC_RS06145 PF01016 Ribosomal L27 protein SHYC_RS06150 PF01018 GTP1/OBG SHYC_RS06150 PF01926 50S ribosome-binding GTPase SHYC_RS06150 PF09269 Domain of unknown function (DUF1967) SHYC_RS06160 PF01330 RuvA N terminal domain SHYC_RS06160 PF07499 RuvA, C-terminal domain SHYC_RS06160 PF14520 Helix-hairpin-helix domain SHYC_RS06165 PF05491 Holliday junction DNA helicase ruvB C-terminus SHYC_RS06165 PF05496 Holliday junction DNA helicase ruvB N-terminus SHYC_RS06170 PF02547 Queuosine biosynthesis protein SHYC_RS06175 PF01702 Queuine tRNA-ribosyltransferase SHYC_RS06180 PF02699 Preprotein translocase subunit SHYC_RS06185 PF02355 Protein export membrane protein SHYC_RS06185 PF07549 SecD/SecF GG Motif SHYC_RS06190 PF01368 DHH family SHYC_RS06190 PF02272 DHHA1 domain SHYC_RS06190 PF10141 SHYC_RS06190 SHYC_RS06195 PF00156 Phosphoribosyl transferase domain SHYC_RS06200 PF02824 TGS domain SHYC_RS06200 PF04607 Region found in RelA / SpoT proteins SHYC_RS06200 PF13291 ACT domain SHYC_RS06200 PF13328 HD domain SHYC_RS06205 PF02580 D-Tyr-tRNA(Tyr) deacylase SHYC_RS06210 PF01520 N-acetylmuramoyl-L-alanine amidase SHYC_RS06210 PF08239 Bacterial SH3 domain SHYC_RS06215 PF03129 Anticodon binding domain SHYC_RS06215 PF13393 Histidyl-tRNA synthetase SHYC_RS06220 PF00152 tRNA synthetases class II (D, K and N) SHYC_RS06220 PF01336 OB-fold nucleic acid binding domain SHYC_RS06220 PF02938 GAD domain SHYC_RS06225 PF00899 ThiF family SHYC_RS06230 PF00004 ATPase family associated with various cellular activities (AAA) SHYC_RS06230 PF12002 MgsA AAA+ ATPase C terminal SHYC_RS06230 PF16193 SHYC_RS06230 SHYC_RS06235 PF02082 Transcriptional regulator SHYC_RS06240 PF00248 Aldo/keto reductase family SHYC_RS06245 PF05532 CsbD-like SHYC_RS06250 PF00296 Luciferase-like monooxygenase SHYC_RS06255 PF00266 Aminotransferase class-V SHYC_RS06260 PF03054 tRNA methyl transferase SHYC_RS06265 PF14559 Tetratricopeptide repeat SHYC_RS06270 PF13538 UvrD-like helicase C-terminal domain SHYC_RS06270 PF13604 AAA domain SHYC_RS06270 PF14490 Helix-hairpin-helix containing domain SHYC_RS06275 PF01411 tRNA synthetases class II (A) SHYC_RS06275 PF02272 DHHA1 domain SHYC_RS06275 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain SHYC_RS06280 PF06135 SHYC_RS06280 SHYC_RS06285 PF03652 Uncharacterised protein family (UPF0081) SHYC_RS06290 PF06949 SHYC_RS06290 SHYC_RS06295 PF01596 O-methyltransferase SHYC_RS06300 PF01136 SHYC_RS06300 SHYC_RS06305 PF01136 SHYC_RS06305 SHYC_RS06305 PF16325 SHYC_RS06305 SHYC_RS06310 PF00485 Phosphoribulokinase / Uridine kinase family SHYC_RS06315 PF01272 Transcription elongation factor, GreA/GreB, C-term SHYC_RS06315 PF03449 Transcription elongation factor, N-terminal SHYC_RS06320 PF02682 Allophanate hydrolase subunit 1 SHYC_RS06325 PF02626 Allophanate hydrolase subunit 2 SHYC_RS06330 PF00364 Biotin-requiring enzyme SHYC_RS06335 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SHYC_RS06335 PF02785 Biotin carboxylase C-terminal domain SHYC_RS06335 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SHYC_RS06340 PF03746 LamB/YcsF family SHYC_RS06345 PF01566 SHYC_RS06345 SHYC_RS06350 PF01048 Phosphorylase superfamily SHYC_RS06355 PF13419 Haloacid dehalogenase-like hydrolase SHYC_RS06360 PF01926 50S ribosome-binding GTPase SHYC_RS06365 PF01488 Shikimate / quinate 5-dehydrogenase SHYC_RS06365 PF08501 Shikimate dehydrogenase substrate binding domain SHYC_RS06370 PF01985 CRS1 / YhbY (CRM) domain SHYC_RS06375 PF01467 Cytidylyltransferase SHYC_RS06380 PF01966 HD domain SHYC_RS06385 PF02410 Oligomerisation domain SHYC_RS06390 PF13649 Methyltransferase domain SHYC_RS06395 PF10531 SLBB domain SHYC_RS06395 PF12836 Helix-hairpin-helix motif SHYC_RS06400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SHYC_RS06405 PF00753 Metallo-beta-lactamase superfamily SHYC_RS06405 PF03772 SHYC_RS06405 SHYC_RS06410 PF06144 DNA polymerase III, delta subunit SHYC_RS06415 PF01649 Ribosomal protein S20 SHYC_RS06420 PF00009 Elongation factor Tu GTP binding domain SHYC_RS06420 PF00679 Elongation factor G C-terminus SHYC_RS06420 PF03144 Elongation factor Tu domain 2 SHYC_RS06420 PF06421 GTP-binding protein LepA C-terminus SHYC_RS06425 PF04055 Radical SAM superfamily SHYC_RS06425 PF06969 HemN C-terminal domain SHYC_RS06430 PF01628 HrcA protein C terminal domain SHYC_RS06430 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding SHYC_RS06435 PF01025 GrpE SHYC_RS06440 PF00012 Hsp70 protein SHYC_RS06445 PF00226 DnaJ domain SHYC_RS06445 PF00684 DnaJ central domain SHYC_RS06445 PF01556 DnaJ C terminal domain SHYC_RS06450 PF06325 Ribosomal protein L11 methyltransferase (PrmA) SHYC_RS06455 PF04452 RNA methyltransferase SHYC_RS06460 PF00919 Uncharacterized protein family UPF0004 SHYC_RS06460 PF04055 Radical SAM superfamily SHYC_RS06465 PF01165 Ribosomal protein S21 SHYC_RS06475 PF12127 SHYC_RS06475 SHYC_RS06485 PF02562 PhoH-like protein SHYC_RS06490 PF02130 Uncharacterized protein family UPF0054 SHYC_RS06495 PF01219 Prokaryotic diacylglycerol kinase SHYC_RS06500 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region SHYC_RS06505 PF01926 50S ribosome-binding GTPase SHYC_RS06505 PF07650 KH domain SHYC_RS06510 PF02565 Recombination protein O C terminal SHYC_RS06510 PF11967 Recombination protein O N terminal SHYC_RS06515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SHYC_RS06515 PF03129 Anticodon binding domain SHYC_RS06520 PF00571 CBS domain SHYC_RS06525 PF03618 SHYC_RS06525 SHYC_RS06530 PF01807 CHC2 zinc finger SHYC_RS06530 PF08275 DNA primase catalytic core, N-terminal domain SHYC_RS06530 PF13662 Toprim domain SHYC_RS06535 PF00140 Sigma-70 factor, region 1 SHYC_RS06535 PF03979 Sigma-70 factor, region 1 SHYC_RS06535 PF04539 Sigma-70 region 3 SHYC_RS06535 PF04542 Sigma-70 region 2 SHYC_RS06535 PF04545 Sigma-70, region 4 SHYC_RS06540 PF04816 Family of unknown function (DUF633) SHYC_RS06545 PF01784 NIF3 (NGG1p interacting factor 3) SHYC_RS06550 PF02401 LytB protein SHYC_RS06555 PF00270 DEAD/DEAH box helicase SHYC_RS06555 PF00271 Helicase conserved C-terminal domain SHYC_RS06560 PF01261 Xylose isomerase-like TIM barrel SHYC_RS06565 PF00005 ABC transporter SHYC_RS06570 PF00950 SHYC_RS06570 SHYC_RS06575 PF01475 Ferric uptake regulator family SHYC_RS06580 PF04551 GcpE protein SHYC_RS06585 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain SHYC_RS06585 PF02777 Iron/manganese superoxide dismutases, C-terminal domain SHYC_RS06590 PF00905 Penicillin binding protein transpeptidase domain SHYC_RS06590 PF03717 Penicillin-binding Protein dimerisation domain SHYC_RS06595 PF12849 PBP superfamily domain SHYC_RS06600 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS06605 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS06610 PF00005 ABC transporter SHYC_RS06615 PF01895 PhoU domain SHYC_RS06620 PF00471 Ribosomal protein L33 SHYC_RS06625 PF01812 5-formyltetrahydrofolate cyclo-ligase family SHYC_RS06630 PF01694 Rhomboid family SHYC_RS06630 PF14853 Fis1 C-terminal tetratricopeptide repeat SHYC_RS06635 PF06014 Bacterial protein of unknown function (DUF910) SHYC_RS06640 PF00480 ROK family SHYC_RS06645 PF01910 Domain of unknown function DUF77 SHYC_RS06650 PF00753 Metallo-beta-lactamase superfamily SHYC_RS06655 PF00437 Type II/IV secretion system protein SHYC_RS06660 PF00482 Type II secretion system (T2SS), protein F SHYC_RS06665 PF13544 SHYC_RS06665 SHYC_RS06675 PF13544 SHYC_RS06675 SHYC_RS06675 PF15980 SHYC_RS06675 SHYC_RS06685 PF01202 Shikimate kinase SHYC_RS06690 PF01571 Aminomethyltransferase folate-binding domain SHYC_RS06690 PF08669 Glycine cleavage T-protein C-terminal barrel domain SHYC_RS06695 PF02347 Glycine cleavage system P-protein SHYC_RS06700 PF00266 Aminotransferase class-V SHYC_RS06705 PF00581 Rhodanese-like domain SHYC_RS06710 PF03099 Biotin/lipoate A/B protein ligase family SHYC_RS06725 PF00557 Metallopeptidase family M24 SHYC_RS06725 PF01321 Creatinase/Prolidase N-terminal domain SHYC_RS06730 PF01132 Elongation factor P (EF-P) OB domain SHYC_RS06730 PF08207 Elongation factor P (EF-P) KOW-like domain SHYC_RS06730 PF09285 Elongation factor P, C-terminal SHYC_RS06735 PF00364 Biotin-requiring enzyme SHYC_RS06740 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SHYC_RS06740 PF02785 Biotin carboxylase C-terminal domain SHYC_RS06740 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SHYC_RS06745 PF03780 SHYC_RS06745 SHYC_RS06750 PF01029 NusB family SHYC_RS06755 PF02601 SHYC_RS06755 SHYC_RS06755 PF13742 SHYC_RS06755 SHYC_RS06760 PF02609 Exonuclease VII small subunit SHYC_RS06765 PF00348 Polyprenyl synthetase SHYC_RS06770 PF02779 Transketolase, pyrimidine binding domain SHYC_RS06770 PF02780 Transketolase, C-terminal domain SHYC_RS06770 PF13292 1-deoxy-D-xylulose-5-phosphate synthase SHYC_RS06775 PF01316 Arginine repressor, DNA binding domain SHYC_RS06775 PF02863 Arginine repressor, C-terminal domain SHYC_RS06780 PF02463 RecF/RecN/SMC N terminal domain SHYC_RS06785 PF01515 Phosphate acetyl/butaryl transferase SHYC_RS06790 PF00871 Acetokinase family SHYC_RS06795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SHYC_RS06795 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS06800 PF00676 Dehydrogenase E1 component SHYC_RS06805 PF02779 Transketolase, pyrimidine binding domain SHYC_RS06805 PF02780 Transketolase, C-terminal domain SHYC_RS06810 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SHYC_RS06810 PF00364 Biotin-requiring enzyme SHYC_RS06810 PF02817 e3 binding domain SHYC_RS06815 PF06491 Disulphide isomerase SHYC_RS06820 PF06081 SHYC_RS06820 SHYC_RS06820 PF11728 DUF939 C-terminal domain SHYC_RS06825 PF01546 Peptidase family M20/M25/M40 SHYC_RS06825 PF07687 Peptidase dimerisation domain SHYC_RS06830 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain SHYC_RS06830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase SHYC_RS06835 PF12833 Helix-turn-helix domain SHYC_RS06835 PF14526 Integron-associated effector binding protein SHYC_RS06840 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain SHYC_RS06840 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain SHYC_RS06845 PF12706 Beta-lactamase superfamily domain SHYC_RS06850 PF03807 NADP oxidoreductase coenzyme F420-dependent SHYC_RS06850 PF14748 Pyrroline-5-carboxylate reductase dimerisation SHYC_RS06860 PF00248 Aldo/keto reductase family SHYC_RS06865 PF00293 NUDIX domain SHYC_RS06870 PF01475 Ferric uptake regulator family SHYC_RS06875 PF00589 Phage integrase family SHYC_RS06875 PF02899 Phage integrase, N-terminal SAM-like domain SHYC_RS06880 PF03745 Domain of unknown function (DUF309) SHYC_RS06885 PF02616 ScpA/B protein SHYC_RS06890 PF04079 Putative transcriptional regulators (Ypuh-like) SHYC_RS06895 PF00849 RNA pseudouridylate synthase SHYC_RS06895 PF01479 S4 domain SHYC_RS06900 PF00072 Response regulator receiver domain SHYC_RS06900 PF00486 Transcriptional regulatory protein, C terminal SHYC_RS06905 PF00512 His Kinase A (phospho-acceptor) domain SHYC_RS06905 PF00672 HAMP domain SHYC_RS06905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS06910 PF12822 Protein of unknown function (DUF3816) SHYC_RS06915 PF13370 4Fe-4S single cluster domain SHYC_RS06920 PF14493 SHYC_RS06920 SHYC_RS06925 PF00270 DEAD/DEAH box helicase SHYC_RS06925 PF00271 Helicase conserved C-terminal domain SHYC_RS06925 PF16124 SHYC_RS06925 SHYC_RS06930 PF01476 LysM domain SHYC_RS06935 PF13738 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS06940 PF00710 Asparaginase SHYC_RS06945 PF02224 Cytidylate kinase SHYC_RS06950 PF00575 S1 RNA binding domain SHYC_RS06955 PF01926 50S ribosome-binding GTPase SHYC_RS06955 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal SHYC_RS06960 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus SHYC_RS06960 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus SHYC_RS06965 PF00216 Bacterial DNA-binding protein SHYC_RS06970 PF07307 SHYC_RS06970 SHYC_RS06975 PF01209 ubiE/COQ5 methyltransferase family SHYC_RS06980 PF00348 Polyprenyl synthetase SHYC_RS06985 PF00334 Nucleoside diphosphate kinase SHYC_RS06990 PF01264 Chorismate synthase SHYC_RS06995 PF01761 3-dehydroquinate synthase SHYC_RS07000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) SHYC_RS07005 PF13432 Tetratricopeptide repeat SHYC_RS07010 PF08864 UPF0302 domain SHYC_RS07015 PF07187 SHYC_RS07015 SHYC_RS07020 PF04298 SHYC_RS07020 SHYC_RS07025 PF03819 MazG nucleotide pyrophosphohydrolase domain SHYC_RS07030 PF00534 Glycosyl transferases group 1 SHYC_RS07030 PF13439 Glycosyltransferase Family 4 SHYC_RS07035 PF01743 Poly A polymerase head domain SHYC_RS07035 PF12627 Probable RNA and SrmB- binding site of polymerase A SHYC_RS07035 PF13735 tRNA nucleotidyltransferase domain 2 putative SHYC_RS07040 PF02237 Biotin protein ligase C terminal domain SHYC_RS07040 PF03099 Biotin/lipoate A/B protein ligase family SHYC_RS07040 PF08279 HTH domain SHYC_RS07045 PF00929 Exonuclease SHYC_RS07045 PF04851 Type III restriction enzyme, res subunit SHYC_RS07045 PF13307 Helicase C-terminal domain SHYC_RS07050 PF00152 tRNA synthetases class II (D, K and N) SHYC_RS07050 PF01336 OB-fold nucleic acid binding domain SHYC_RS07055 PF07261 Replication initiation and membrane attachment SHYC_RS07060 PF00633 Helix-hairpin-helix motif SHYC_RS07060 PF00730 HhH-GPD superfamily base excision DNA repair protein SHYC_RS07060 PF10576 Iron-sulfur binding domain of endonuclease III SHYC_RS07070 PF00905 Penicillin binding protein transpeptidase domain SHYC_RS07070 PF00912 Transglycosylase SHYC_RS07075 PF03838 Recombination protein U SHYC_RS07080 PF08807 Bacterial domain of unknown function (DUF1798) SHYC_RS07085 PF06908 Protein of unknown function (DUF1273) SHYC_RS07090 PF05103 DivIVA protein SHYC_RS07095 PF01170 Putative RNA methylase family UPF0020 SHYC_RS07095 PF02926 THUMP domain SHYC_RS07100 PF00892 EamA-like transporter family SHYC_RS07105 PF00350 Dynamin family SHYC_RS07110 PF01367 5'-3' exonuclease, C-terminal SAM fold SHYC_RS07110 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain SHYC_RS07115 PF13456 Reverse transcriptase-like SHYC_RS07120 PF02592 SHYC_RS07120 SHYC_RS07125 PF10782 SHYC_RS07125 SHYC_RS07130 PF08712 Scaffold protein Nfu/NifU N terminal SHYC_RS07130 PF13646 HEAT repeats SHYC_RS07130 PF13769 SHYC_RS07130 SHYC_RS07135 PF06491 Disulphide isomerase SHYC_RS07140 PF00303 Thymidylate synthase SHYC_RS07145 PF00186 Dihydrofolate reductase SHYC_RS07150 PF02645 Uncharacterised protein, DegV family COG1307 SHYC_RS07155 PF01625 Peptide methionine sulfoxide reductase SHYC_RS07160 PF01641 SelR domain SHYC_RS07165 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SHYC_RS07170 PF06855 Protein of unknown function (DUF1250) SHYC_RS07175 PF01471 Putative peptidoglycan binding domain SHYC_RS07175 PF03572 Peptidase family S41 SHYC_RS07175 PF13180 PDZ domain SHYC_RS07180 PF00583 Acetyltransferase (GNAT) family SHYC_RS07185 PF03033 Glycosyltransferase family 28 N-terminal domain SHYC_RS07185 PF04101 Glycosyltransferase family 28 C-terminal domain SHYC_RS07190 PF01569 PAP2 superfamily SHYC_RS07195 PF00072 Response regulator receiver domain SHYC_RS07195 PF00486 Transcriptional regulatory protein, C terminal SHYC_RS07200 PF00512 His Kinase A (phospho-acceptor) domain SHYC_RS07200 PF00672 HAMP domain SHYC_RS07200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS07205 PF00676 Dehydrogenase E1 component SHYC_RS07205 PF02779 Transketolase, pyrimidine binding domain SHYC_RS07205 PF16870 SHYC_RS07205 SHYC_RS07210 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SHYC_RS07210 PF00364 Biotin-requiring enzyme SHYC_RS07210 PF02817 e3 binding domain SHYC_RS07225 PF07728 AAA domain (dynein-related subfamily) SHYC_RS07225 PF08406 SHYC_RS07225 SHYC_RS07230 PF11775 SHYC_RS07230 SHYC_RS07235 PF05525 SHYC_RS07235 SHYC_RS07240 PF05816 SHYC_RS07240 SHYC_RS07245 PF10112 SHYC_RS07245 SHYC_RS07250 PF00708 Acylphosphatase SHYC_RS07255 PF06279 SHYC_RS07255 SHYC_RS07260 PF00313 'Cold-shock' DNA-binding domain SHYC_RS07270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain SHYC_RS07270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain SHYC_RS07275 PF00842 Alanine racemase, C-terminal domain SHYC_RS07275 PF01168 Alanine racemase, N-terminal domain SHYC_RS07280 PF01546 Peptidase family M20/M25/M40 SHYC_RS07280 PF07687 Peptidase dimerisation domain SHYC_RS07285 PF00132 Bacterial transferase hexapeptide (six repeats) SHYC_RS07285 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal SHYC_RS07285 PF14602 Hexapeptide repeat of succinyl-transferase SHYC_RS07290 PF01113 Dihydrodipicolinate reductase, N-terminus SHYC_RS07290 PF05173 Dihydrodipicolinate reductase, C-terminus SHYC_RS07295 PF00701 Dihydrodipicolinate synthetase family SHYC_RS07300 PF01118 Semialdehyde dehydrogenase, NAD binding domain SHYC_RS07300 PF02774 Semialdehyde dehydrogenase, dimerisation domain SHYC_RS07305 PF00005 ABC transporter SHYC_RS07305 PF12848 ABC transporter SHYC_RS07315 PF00294 pfkB family carbohydrate kinase SHYC_RS07320 PF01432 Peptidase family M3 SHYC_RS07320 PF08439 Oligopeptidase F SHYC_RS07330 PF02388 FemAB family SHYC_RS07335 PF02388 FemAB family SHYC_RS07340 PF05343 M42 glutamyl aminopeptidase SHYC_RS07345 PF02153 Prephenate dehydrogenase SHYC_RS07350 PF00817 impB/mucB/samB family SHYC_RS07350 PF11798 IMS family HHH motif SHYC_RS07350 PF11799 impB/mucB/samB family C-terminal domain SHYC_RS07355 PF07070 SHYC_RS07355 SHYC_RS07360 PF01361 Tautomerase enzyme SHYC_RS07365 PF03816 Cell envelope-related transcriptional attenuator domain SHYC_RS07370 PF01625 Peptide methionine sulfoxide reductase SHYC_RS07375 PF03706 SHYC_RS07375 SHYC_RS07375 PF09924 Uncharacterized conserved protein (DUF2156) SHYC_RS07380 PF01594 SHYC_RS07380 SHYC_RS07385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 SHYC_RS07385 PF00367 phosphotransferase system, EIIB SHYC_RS07385 PF02378 Phosphotransferase system, EIIC SHYC_RS07390 PF00874 PRD domain SHYC_RS07390 PF03123 CAT RNA binding domain SHYC_RS07395 PF01235 SHYC_RS07395 SHYC_RS07400 PF00521 DNA gyrase/topoisomerase IV, subunit A SHYC_RS07400 PF03989 DNA gyrase C-terminal domain, beta-propeller SHYC_RS07405 PF00204 DNA gyrase B SHYC_RS07405 PF00986 DNA gyrase B subunit, carboxyl terminus SHYC_RS07405 PF01751 Toprim domain SHYC_RS07405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS07410 PF02660 SHYC_RS07410 SHYC_RS07420 PF03061 Thioesterase superfamily SHYC_RS07425 PF00330 Aconitase family (aconitate hydratase) SHYC_RS07425 PF00694 Aconitase C-terminal domain SHYC_RS07430 PF02028 BCCT family transporter SHYC_RS07435 PF01741 Large-conductance mechanosensitive channel, MscL SHYC_RS07440 PF13476 AAA domain SHYC_RS07440 PF13558 Putative exonuclease SbcCD, C subunit SHYC_RS07445 PF00149 Calcineurin-like phosphoesterase SHYC_RS07445 PF12320 Type 5 capsule protein repressor C-terminal domain SHYC_RS07450 PF07301 SHYC_RS07450 SHYC_RS07455 PF03672 SHYC_RS07455 SHYC_RS07460 PF00456 Transketolase, thiamine diphosphate binding domain SHYC_RS07460 PF02779 Transketolase, pyrimidine binding domain SHYC_RS07460 PF02780 Transketolase, C-terminal domain SHYC_RS07465 PF05979 Bacterial protein of unknown function (DUF896) SHYC_RS07475 PF00717 Peptidase S24-like SHYC_RS07475 PF01726 LexA DNA binding domain SHYC_RS07485 PF00188 Cysteine-rich secretory protein family SHYC_RS07485 PF14504 CAP-associated N-terminal SHYC_RS07490 PF00478 IMP dehydrogenase / GMP reductase domain SHYC_RS07495 PF00253 Ribosomal protein S14p/S29e SHYC_RS07500 PF00471 Ribosomal protein L33 SHYC_RS07505 PF00199 Catalase SHYC_RS07505 PF06628 Catalase-related immune-responsive SHYC_RS07510 PF00324 Amino acid permease SHYC_RS07520 PF08282 haloacid dehalogenase-like hydrolase SHYC_RS07525 PF00288 GHMP kinases N terminal domain SHYC_RS07525 PF08544 GHMP kinases C terminal SHYC_RS07530 PF00291 Pyridoxal-phosphate dependent enzyme SHYC_RS07535 PF00742 Homoserine dehydrogenase SHYC_RS07535 PF03447 Homoserine dehydrogenase, NAD binding domain SHYC_RS07540 PF00696 Amino acid kinase family SHYC_RS07540 PF01842 ACT domain SHYC_RS07550 PF13463 Winged helix DNA-binding domain SHYC_RS07560 PF00565 Staphylococcal nuclease homologue SHYC_RS07570 PF00072 Response regulator receiver domain SHYC_RS07570 PF00196 Bacterial regulatory proteins, luxR family SHYC_RS07575 PF07730 Histidine kinase SHYC_RS07585 PF00005 ABC transporter SHYC_RS07595 PF04650 SHYC_RS07595 SHYC_RS07595 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SHYC_RS07605 PF04235 SHYC_RS07605 SHYC_RS07610 PF00120 Glutamine synthetase, catalytic domain SHYC_RS07610 PF03951 Glutamine synthetase, beta-Grasp domain SHYC_RS07615 PF13411 MerR HTH family regulatory protein SHYC_RS07620 PF06838 Methionine gamma-lyase SHYC_RS07625 PF01926 50S ribosome-binding GTPase SHYC_RS07625 PF13167 SHYC_RS07625 SHYC_RS07625 PF16360 SHYC_RS07625 SHYC_RS07630 PF00255 Glutathione peroxidase SHYC_RS07640 PF01715 IPP transferase SHYC_RS07645 PF12146 Putative lysophospholipase SHYC_RS07650 PF01266 FAD dependent oxidoreductase SHYC_RS07650 PF16901 SHYC_RS07650 SHYC_RS07660 PF00230 Major intrinsic protein SHYC_RS07665 PF02016 LD-carboxypeptidase SHYC_RS07670 PF04309 Glycerol-3-phosphate responsive antiterminator SHYC_RS07675 PF01119 DNA mismatch repair protein, C-terminal domain SHYC_RS07675 PF08676 MutL C terminal dimerisation domain SHYC_RS07675 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase SHYC_RS07680 PF00488 MutS domain V SHYC_RS07680 PF01624 MutS domain I SHYC_RS07680 PF05188 MutS domain II SHYC_RS07680 PF05190 MutS family domain IV SHYC_RS07680 PF05192 MutS domain III SHYC_RS07685 PF09512 SHYC_RS07685 SHYC_RS07690 PF06133 Protein of unknown function (DUF964) SHYC_RS07695 PF00919 Uncharacterized protein family UPF0004 SHYC_RS07695 PF01938 TRAM domain SHYC_RS07695 PF04055 Radical SAM superfamily SHYC_RS07700 PF01910 Domain of unknown function DUF77 SHYC_RS07705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SHYC_RS07705 PF12367 SHYC_RS07705 SHYC_RS07710 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase SHYC_RS07710 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg SHYC_RS07710 PF17147 SHYC_RS07710 SHYC_RS07715 PF13277 YmdB-like protein SHYC_RS07720 PF00122 E1-E2 ATPase SHYC_RS07720 PF00403 Heavy-metal-associated domain SHYC_RS07720 PF00702 haloacid dehalogenase-like hydrolase SHYC_RS07725 PF01022 Bacterial regulatory protein, arsR family SHYC_RS07735 PF00013 KH domain SHYC_RS07735 PF01966 HD domain SHYC_RS07735 PF12072 SHYC_RS07735 SHYC_RS07740 PF00154 recA bacterial DNA recombination protein SHYC_RS07745 PF00994 Probable molybdopterin binding domain SHYC_RS07750 PF01066 CDP-alcohol phosphatidyltransferase SHYC_RS07755 PF13413 Helix-turn-helix domain SHYC_RS07760 PF11868 SHYC_RS07760 SHYC_RS07765 PF13561 Enoyl-(Acyl carrier protein) reductase SHYC_RS07770 PF00675 Insulinase (Peptidase family M16) SHYC_RS07770 PF05193 Peptidase M16 inactive domain SHYC_RS07775 PF05193 Peptidase M16 inactive domain SHYC_RS07780 PF00392 Bacterial regulatory proteins, gntR family SHYC_RS07780 PF07702 UTRA domain SHYC_RS07785 PF01580 FtsK/SpoIIIE family SHYC_RS07785 PF09397 Ftsk gamma domain SHYC_RS07790 PF00753 Metallo-beta-lactamase superfamily SHYC_RS07790 PF07521 RNA-metabolising metallo-beta-lactamase SHYC_RS07795 PF10460 SHYC_RS07795 SHYC_RS07800 PF00013 KH domain SHYC_RS07800 PF00575 S1 RNA binding domain SHYC_RS07800 PF01138 3' exoribonuclease family, domain 1 SHYC_RS07800 PF03725 3' exoribonuclease family, domain 2 SHYC_RS07800 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain SHYC_RS07805 PF00312 Ribosomal protein S15 SHYC_RS07810 PF01687 Riboflavin kinase SHYC_RS07810 PF06574 FAD synthetase SHYC_RS07815 PF01509 TruB family pseudouridylate synthase (N terminal domain) SHYC_RS07815 PF16198 SHYC_RS07815 SHYC_RS07820 PF02033 Ribosome-binding factor A SHYC_RS07830 PF00009 Elongation factor Tu GTP binding domain SHYC_RS07830 PF04760 Translation initiation factor IF-2, N-terminal region SHYC_RS07830 PF11987 Translation-initiation factor 2 SHYC_RS07835 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SHYC_RS07840 PF04296 Protein of unknown function (DUF448) SHYC_RS07845 PF08529 NusA N-terminal domain SHYC_RS07845 PF13184 NusA-like KH domain SHYC_RS07850 PF02576 Uncharacterised BCR, YhbC family COG0779 SHYC_RS07855 PF00929 Exonuclease SHYC_RS07855 PF02811 PHP domain SHYC_RS07855 PF07733 Bacterial DNA polymerase III alpha subunit SHYC_RS07855 PF11490 SHYC_RS07855 SHYC_RS07855 PF14480 SHYC_RS07855 SHYC_RS07855 PF14579 Helix-hairpin-helix motif SHYC_RS07860 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) SHYC_RS07860 PF03129 Anticodon binding domain SHYC_RS07860 PF04073 Aminoacyl-tRNA editing domain SHYC_RS07865 PF02163 Peptidase family M50 SHYC_RS07865 PF13180 PDZ domain SHYC_RS07870 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase SHYC_RS07870 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal SHYC_RS07870 PF13288 DXP reductoisomerase C-terminal domain SHYC_RS07875 PF01148 Cytidylyltransferase family SHYC_RS07880 PF01255 Putative undecaprenyl diphosphate synthase SHYC_RS07885 PF01765 Ribosome recycling factor SHYC_RS07890 PF00696 Amino acid kinase family SHYC_RS07895 PF00889 Elongation factor TS SHYC_RS07900 PF00318 Ribosomal protein S2 SHYC_RS07905 PF06018 CodY GAF-like domain SHYC_RS07905 PF08222 CodY helix-turn-helix domain SHYC_RS07910 PF00004 ATPase family associated with various cellular activities (AAA) SHYC_RS07910 PF07724 AAA domain (Cdc48 subfamily) SHYC_RS07910 PF10431 C-terminal, D2-small domain, of ClpB protein SHYC_RS07915 PF00227 Proteasome subunit SHYC_RS07920 PF00589 Phage integrase family SHYC_RS07920 PF02899 Phage integrase, N-terminal SAM-like domain SHYC_RS07925 PF01134 Glucose inhibited division protein A SHYC_RS07930 PF01131 DNA topoisomerase SHYC_RS07930 PF01396 SHYC_RS07930 SHYC_RS07930 PF01751 Toprim domain SHYC_RS07935 PF02481 DNA recombination-mediator protein A SHYC_RS07940 PF00549 CoA-ligase SHYC_RS07940 PF02629 CoA binding domain SHYC_RS07945 PF00549 CoA-ligase SHYC_RS07945 PF08442 ATP-grasp domain SHYC_RS07955 PF01351 Ribonuclease HII SHYC_RS07960 PF01926 50S ribosome-binding GTPase SHYC_RS07965 PF04138 SHYC_RS07965 SHYC_RS07970 PF09586 SHYC_RS07970 SHYC_RS07975 PF09586 SHYC_RS07975 SHYC_RS07980 PF01569 PAP2 superfamily SHYC_RS07985 PF01245 Ribosomal protein L19 SHYC_RS07990 PF01746 tRNA (Guanine-1)-methyltransferase SHYC_RS07995 PF01782 RimM N-terminal domain SHYC_RS07995 PF05239 PRC-barrel domain SHYC_RS08000 PF00886 Ribosomal protein S16 SHYC_RS08005 PF00448 SRP54-type protein, GTPase domain SHYC_RS08005 PF02881 SRP54-type protein, helical bundle domain SHYC_RS08005 PF02978 Signal peptide binding domain SHYC_RS08010 PF04297 Putative helix-turn-helix protein, YlxM / p13 like SHYC_RS08015 PF00448 SRP54-type protein, GTPase domain SHYC_RS08015 PF02881 SRP54-type protein, helical bundle domain SHYC_RS08020 PF02463 RecF/RecN/SMC N terminal domain SHYC_RS08020 PF06470 SMC proteins Flexible Hinge Domain SHYC_RS08025 PF00035 Double-stranded RNA binding motif SHYC_RS08025 PF14622 Ribonuclease-III-like SHYC_RS08030 PF00550 Phosphopantetheine attachment site SHYC_RS08035 PF13561 Enoyl-(Acyl carrier protein) reductase SHYC_RS08040 PF00698 Acyl transferase domain SHYC_RS08045 PF02504 Fatty acid synthesis protein SHYC_RS08050 PF03061 Thioesterase superfamily SHYC_RS08055 PF00270 DEAD/DEAH box helicase SHYC_RS08055 PF00271 Helicase conserved C-terminal domain SHYC_RS08055 PF17191 SHYC_RS08055 SHYC_RS08060 PF03313 SHYC_RS08060 SHYC_RS08065 PF01842 ACT domain SHYC_RS08065 PF03315 Serine dehydratase beta chain SHYC_RS08070 PF02734 DAK2 domain SHYC_RS08070 PF13684 Dihydroxyacetone kinase family SHYC_RS08075 PF03780 SHYC_RS08075 SHYC_RS08080 PF00830 Ribosomal L28 family SHYC_RS08085 PF04263 Thiamin pyrophosphokinase, catalytic domain SHYC_RS08085 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain SHYC_RS08090 PF00834 Ribulose-phosphate 3 epimerase family SHYC_RS08095 PF03193 Protein of unknown function, DUF258 SHYC_RS08095 PF16745 SHYC_RS08095 SHYC_RS08100 PF00067 Cytochrome P450 SHYC_RS08105 PF00069 Protein kinase domain SHYC_RS08105 PF03793 PASTA domain SHYC_RS08110 PF13672 Protein phosphatase 2C SHYC_RS08115 PF04055 Radical SAM superfamily SHYC_RS08115 PF13394 4Fe-4S single cluster domain SHYC_RS08120 PF01029 NusB family SHYC_RS08120 PF01189 NOL1/NOP2/sun family SHYC_RS08125 PF00551 Formyl transferase SHYC_RS08125 PF02911 Formyl transferase, C-terminal domain SHYC_RS08130 PF01327 Polypeptide deformylase SHYC_RS08140 PF00271 Helicase conserved C-terminal domain SHYC_RS08140 PF04851 Type III restriction enzyme, res subunit SHYC_RS08145 PF02441 Flavoprotein SHYC_RS08145 PF04127 DNA / pantothenate metabolism flavoprotein SHYC_RS08150 PF01192 RNA polymerase Rpb6 SHYC_RS08155 PF00625 Guanylate kinase SHYC_RS08160 PF05670 SHYC_RS08160 SHYC_RS08160 PF05833 Fibronectin-binding protein A N-terminus (FbpA) SHYC_RS08165 PF06983 3-demethylubiquinone-9 3-methyltransferase SHYC_RS08170 PF00156 Phosphoribosyl transferase domain SHYC_RS08175 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SHYC_RS08180 PF01180 Dihydroorotate dehydrogenase SHYC_RS08185 PF00175 Oxidoreductase NAD-binding domain SHYC_RS08185 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B SHYC_RS08190 PF02142 MGS-like domain SHYC_RS08190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SHYC_RS08190 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SHYC_RS08195 PF00117 Glutamine amidotransferase class-I SHYC_RS08195 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain SHYC_RS08200 PF01979 Amidohydrolase family SHYC_RS08205 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain SHYC_RS08205 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain SHYC_RS08210 PF00860 Permease family SHYC_RS08215 PF00156 Phosphoribosyl transferase domain SHYC_RS08220 PF00849 RNA pseudouridylate synthase SHYC_RS08220 PF01479 S4 domain SHYC_RS08225 PF01252 SHYC_RS08225 SHYC_RS08235 PF00133 tRNA synthetases class I (I, L, M and V) SHYC_RS08235 PF06827 Zinc finger found in FPG and IleRS SHYC_RS08235 PF08264 Anticodon-binding domain of tRNA SHYC_RS08240 PF05103 DivIVA protein SHYC_RS08245 PF01479 S4 domain SHYC_RS08250 PF02325 SHYC_RS08250 SHYC_RS08255 PF04472 Protein of unknown function (DUF552) SHYC_RS08260 PF01168 Alanine racemase, N-terminal domain SHYC_RS08265 PF02578 Multi-copper polyphenol oxidoreductase laccase SHYC_RS08270 PF00091 Tubulin/FtsZ family, GTPase domain SHYC_RS08270 PF12327 FtsZ family, C-terminal domain SHYC_RS08275 PF02491 SHS2 domain inserted in FTSA SHYC_RS08275 PF14450 Cell division protein FtsA SHYC_RS08280 PF03799 Cell division protein FtsQ SHYC_RS08280 PF08478 POTRA domain, FtsQ-type SHYC_RS08285 PF02875 Mur ligase family, glutamate ligase domain SHYC_RS08285 PF08245 Mur ligase middle domain SHYC_RS08290 PF00953 Glycosyl transferase family 4 SHYC_RS08295 PF00905 Penicillin binding protein transpeptidase domain SHYC_RS08295 PF03717 Penicillin-binding Protein dimerisation domain SHYC_RS08295 PF03793 PASTA domain SHYC_RS08300 PF04977 Septum formation initiator SHYC_RS08305 PF01795 MraW methylase family SHYC_RS08310 PF02381 MraZ protein SHYC_RS08315 PF10079 SHYC_RS08315 SHYC_RS08320 PF00583 Acetyltransferase (GNAT) family SHYC_RS08325 PF05480 SHYC_RS08325 SHYC_RS08330 PF02386 Cation transport protein SHYC_RS08345 PF11546 Staphylococcal complement inhibitor SCIN SHYC_RS08350 PF02388 FemAB family SHYC_RS08355 PF01551 Peptidase family M23 SHYC_RS08365 PF12850 Calcineurin-like phosphoesterase superfamily domain SHYC_RS08370 PF01725 Ham1 family SHYC_RS08375 PF01177 Asp/Glu/Hydantoin racemase SHYC_RS08380 PF13085 2Fe-2S iron-sulfur cluster binding domain SHYC_RS08380 PF13183 4Fe-4S dicluster domain SHYC_RS08385 PF00890 FAD binding domain SHYC_RS08385 PF02910 Fumarate reductase flavoprotein C-term SHYC_RS08390 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit SHYC_RS08395 PF01541 GIY-YIG catalytic domain SHYC_RS08395 PF02151 UvrB/uvrC motif SHYC_RS08395 PF08459 UvrC Helix-hairpin-helix N-terminal SHYC_RS08395 PF14520 Helix-hairpin-helix domain SHYC_RS08400 PF00085 Thioredoxin SHYC_RS08405 PF00488 MutS domain V SHYC_RS08405 PF01713 Smr domain SHYC_RS08410 PF02811 PHP domain SHYC_RS08410 PF14520 Helix-hairpin-helix domain SHYC_RS08410 PF14716 Helix-hairpin-helix domain SHYC_RS08410 PF14791 DNA polymerase beta thumb SHYC_RS08415 PF02674 SHYC_RS08415 SHYC_RS08420 PF05164 Cell division protein ZapA SHYC_RS08425 PF01351 Ribonuclease HII SHYC_RS08425 PF11858 Domain of unknown function (DUF3378) SHYC_RS08430 PF01588 Putative tRNA binding domain SHYC_RS08430 PF03147 Ferredoxin-fold anticodon binding domain SHYC_RS08430 PF03483 B3/4 domain SHYC_RS08430 PF03484 tRNA synthetase B5 domain SHYC_RS08435 PF01409 tRNA synthetases class II core domain (F) SHYC_RS08435 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain SHYC_RS08440 PF00588 SpoU rRNA Methylase family SHYC_RS08440 PF08032 RNA 2'-O ribose methyltransferase substrate binding SHYC_RS08445 PF01783 Ribosomal L32p protein family SHYC_RS08450 PF02620 SHYC_RS08450 SHYC_RS08455 PF05636 HIGH Nucleotidyl Transferase SHYC_RS08460 PF01467 Cytidylyltransferase SHYC_RS08465 PF03602 Conserved hypothetical protein 95 SHYC_RS08475 PF09902 SHYC_RS08475 SHYC_RS08480 PF03009 Glycerophosphoryl diester phosphodiesterase family SHYC_RS08485 PF06133 Protein of unknown function (DUF964) SHYC_RS08490 PF00188 Cysteine-rich secretory protein family SHYC_RS08490 PF14504 CAP-associated N-terminal SHYC_RS08495 PF04238 SHYC_RS08495 SHYC_RS08500 PF01040 UbiA prenyltransferase family SHYC_RS08505 PF02628 SHYC_RS08505 SHYC_RS08510 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain SHYC_RS08510 PF00364 Biotin-requiring enzyme SHYC_RS08510 PF00682 HMGL-like SHYC_RS08510 PF02436 Conserved carboxylase domain SHYC_RS08510 PF02785 Biotin carboxylase C-terminal domain SHYC_RS08510 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain SHYC_RS08515 PF01098 SHYC_RS08515 SHYC_RS08520 PF07408 Protein of unknown function (DUF1507) SHYC_RS08530 PF09963 SHYC_RS08530 SHYC_RS08535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family SHYC_RS08540 PF00009 Elongation factor Tu GTP binding domain SHYC_RS08540 PF00679 Elongation factor G C-terminus SHYC_RS08540 PF03144 Elongation factor Tu domain 2 SHYC_RS08550 PF00459 Inositol monophosphatase family SHYC_RS08555 PF06335 Protein of unknown function (DUF1054) SHYC_RS08560 PF13273 SHYC_RS08560 SHYC_RS08565 PF13273 SHYC_RS08565 SHYC_RS08570 PF13416 Bacterial extracellular solute-binding protein SHYC_RS08575 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS08585 PF00005 ABC transporter SHYC_RS08585 PF08402 TOBE domain SHYC_RS08590 PF01381 Helix-turn-helix SHYC_RS08590 PF07883 Cupin domain SHYC_RS08595 PF05256 Uncharacterised protein family (UPF0223) SHYC_RS08600 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SHYC_RS08600 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS08605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) SHYC_RS08605 PF00364 Biotin-requiring enzyme SHYC_RS08605 PF02817 e3 binding domain SHYC_RS08610 PF02779 Transketolase, pyrimidine binding domain SHYC_RS08610 PF02780 Transketolase, C-terminal domain SHYC_RS08615 PF00676 Dehydrogenase E1 component SHYC_RS08620 PF10368 Putative cell-wall binding lipoprotein SHYC_RS08625 PF01327 Polypeptide deformylase SHYC_RS08635 PF07288 Protein of unknown function (DUF1447) SHYC_RS08640 PF00753 Metallo-beta-lactamase superfamily SHYC_RS08640 PF07521 RNA-metabolising metallo-beta-lactamase SHYC_RS08650 PF02080 TrkA-C domain SHYC_RS08650 PF02254 TrkA-N domain SHYC_RS08655 PF02322 SHYC_RS08655 SHYC_RS08660 PF01654 SHYC_RS08660 SHYC_RS08665 PF00462 Glutaredoxin SHYC_RS08670 PF00391 PEP-utilising enzyme, mobile domain SHYC_RS08670 PF02896 PEP-utilising enzyme, TIM barrel domain SHYC_RS08670 PF05524 PEP-utilising enzyme, N-terminal SHYC_RS08675 PF00381 PTS HPr component phosphorylation site SHYC_RS08680 PF05049 Interferon-inducible GTPase (IIGP) SHYC_RS08685 PF10672 S-adenosylmethionine-dependent methyltransferase SHYC_RS08695 PF09819 SHYC_RS08695 SHYC_RS08700 PF00005 ABC transporter SHYC_RS08705 PF02361 Cobalt transport protein SHYC_RS08710 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain SHYC_RS08710 PF02843 Phosphoribosylglycinamide synthetase, C domain SHYC_RS08710 PF02844 Phosphoribosylglycinamide synthetase, N domain SHYC_RS08715 PF01808 AICARFT/IMPCHase bienzyme SHYC_RS08715 PF02142 MGS-like domain SHYC_RS08720 PF00551 Formyl transferase SHYC_RS08725 PF00586 AIR synthase related protein, N-terminal domain SHYC_RS08725 PF02769 AIR synthase related protein, C-terminal domain SHYC_RS08730 PF00156 Phosphoribosyl transferase domain SHYC_RS08730 PF13537 Glutamine amidotransferase domain SHYC_RS08735 PF00586 AIR synthase related protein, N-terminal domain SHYC_RS08735 PF02769 AIR synthase related protein, C-terminal domain SHYC_RS08740 PF13507 CobB/CobQ-like glutamine amidotransferase domain SHYC_RS08745 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase SHYC_RS08750 PF01259 SAICAR synthetase SHYC_RS08755 PF02222 ATP-grasp domain SHYC_RS08755 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SHYC_RS08760 PF00731 AIR carboxylase SHYC_RS08765 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain SHYC_RS08765 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain SHYC_RS08770 PF00042 Globin SHYC_RS08770 PF00175 Oxidoreductase NAD-binding domain SHYC_RS08770 PF00970 Oxidoreductase FAD-binding domain SHYC_RS08775 PF16403 SHYC_RS08775 SHYC_RS08780 PF00116 Cytochrome C oxidase subunit II, periplasmic domain SHYC_RS08780 PF02790 Cytochrome C oxidase subunit II, transmembrane domain SHYC_RS08785 PF00115 Cytochrome C and Quinol oxidase polypeptide I SHYC_RS08790 PF00510 Cytochrome c oxidase subunit III SHYC_RS08795 PF03626 SHYC_RS08795 SHYC_RS08800 PF00534 Glycosyl transferases group 1 SHYC_RS08805 PF00005 ABC transporter SHYC_RS08825 PF00534 Glycosyl transferases group 1 SHYC_RS08830 PF00535 Glycosyl transferase family 2 SHYC_RS08840 PF00534 Glycosyl transferases group 1 SHYC_RS08845 PF01061 SHYC_RS08845 SHYC_RS08850 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain SHYC_RS08850 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain SHYC_RS08850 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain SHYC_RS08855 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain SHYC_RS08855 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I SHYC_RS08855 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II SHYC_RS08855 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III SHYC_RS08860 PF03816 Cell envelope-related transcriptional attenuator domain SHYC_RS08865 PF10804 Protein of unknown function (DUF2538) SHYC_RS08870 PF13673 Acetyltransferase (GNAT) domain SHYC_RS08875 PF01510 N-acetylmuramoyl-L-alanine amidase SHYC_RS08875 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase SHYC_RS08875 PF13457 SH3-like domain SHYC_RS08880 PF01757 SHYC_RS08880 SHYC_RS08885 PF00155 Aminotransferase class I and II SHYC_RS08890 PF00378 Enoyl-CoA hydratase/isomerase family SHYC_RS08895 PF12697 Alpha/beta hydrolase family SHYC_RS08900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain SHYC_RS08900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SHYC_RS08900 PF16582 SHYC_RS08900 SHYC_RS08905 PF00425 chorismate binding enzyme SHYC_RS08910 PF01040 UbiA prenyltransferase family SHYC_RS08915 PF03649 SHYC_RS08915 SHYC_RS08920 PF00005 ABC transporter SHYC_RS08925 PF00583 Acetyltransferase (GNAT) family SHYC_RS08940 PF08863 SHYC_RS08940 SHYC_RS08950 PF06338 SHYC_RS08950 SHYC_RS08955 PF08858 IDEAL domain SHYC_RS08960 PF03099 Biotin/lipoate A/B protein ligase family SHYC_RS08960 PF10437 Bacterial lipoate protein ligase C-terminus SHYC_RS08965 PF09953 SHYC_RS08965 SHYC_RS08970 PF02517 CAAX protease self-immunity SHYC_RS08975 PF04650 SHYC_RS08975 SHYC_RS08975 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SHYC_RS08980 PF02872 5'-nucleotidase, C-terminal domain SHYC_RS08985 PF02386 Cation transport protein SHYC_RS08990 PF13180 PDZ domain SHYC_RS08990 PF13365 Trypsin-like peptidase domain SHYC_RS08995 PF03741 SHYC_RS08995 SHYC_RS09000 PF00009 Elongation factor Tu GTP binding domain SHYC_RS09000 PF03144 Elongation factor Tu domain 2 SHYC_RS09000 PF16658 SHYC_RS09000 SHYC_RS09005 PF14166 SHYC_RS09005 SHYC_RS09010 PF01225 Mur ligase family, catalytic domain SHYC_RS09010 PF02875 Mur ligase family, glutamate ligase domain SHYC_RS09010 PF08245 Mur ligase middle domain SHYC_RS09015 PF04101 Glycosyltransferase family 28 C-terminal domain SHYC_RS09015 PF06925 SHYC_RS09015 SHYC_RS09020 PF07690 Major Facilitator Superfamily SHYC_RS09030 PF13563 2'-5' RNA ligase superfamily SHYC_RS09035 PF00756 Putative esterase SHYC_RS09040 PF01235 SHYC_RS09040 SHYC_RS09045 PF01594 SHYC_RS09045 SHYC_RS09050 PF13561 Enoyl-(Acyl carrier protein) reductase SHYC_RS09055 PF00999 Sodium/hydrogen exchanger family SHYC_RS09055 PF02080 TrkA-C domain SHYC_RS09055 PF02254 TrkA-N domain SHYC_RS09060 PF00571 CBS domain SHYC_RS09060 PF01769 Divalent cation transporter SHYC_RS09060 PF03448 MgtE intracellular N domain SHYC_RS09065 PF00849 RNA pseudouridylate synthase SHYC_RS09070 PF01513 ATP-NAD kinase SHYC_RS09075 PF04607 Region found in RelA / SpoT proteins SHYC_RS09085 PF01928 CYTH domain SHYC_RS09090 PF01152 Bacterial-like globin SHYC_RS09095 PF13743 Thioredoxin SHYC_RS09100 PF01432 Peptidase family M3 SHYC_RS09100 PF08439 Oligopeptidase F SHYC_RS09105 PF06054 SHYC_RS09105 SHYC_RS09110 PF05389 Negative regulator of genetic competence (MecA) SHYC_RS09115 PF03960 ArsC family SHYC_RS09120 PF00579 tRNA synthetases class I (W and Y) SHYC_RS09130 PF00005 ABC transporter SHYC_RS09130 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHYC_RS09135 PF00005 ABC transporter SHYC_RS09135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region SHYC_RS09140 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS09140 PF12911 SHYC_RS09140 SHYC_RS09145 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS09150 PF13038 SHYC_RS09150 SHYC_RS09155 PF00109 Beta-ketoacyl synthase, N-terminal domain SHYC_RS09155 PF02801 Beta-ketoacyl synthase, C-terminal domain SHYC_RS09160 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal SHYC_RS09160 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SHYC_RS09165 PF11151 SHYC_RS09165 SHYC_RS09170 PF00004 ATPase family associated with various cellular activities (AAA) SHYC_RS09170 PF02861 Clp amino terminal domain SHYC_RS09170 PF07724 AAA domain (Cdc48 subfamily) SHYC_RS09170 PF10431 C-terminal, D2-small domain, of ClpB protein SHYC_RS09175 PF01883 Domain of unknown function DUF59 SHYC_RS09180 PF08282 haloacid dehalogenase-like hydrolase SHYC_RS09185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain SHYC_RS09185 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS09190 PF07457 SHYC_RS09190 SHYC_RS09195 PF01557 Fumarylacetoacetate (FAA) hydrolase family SHYC_RS09200 PF00580 UvrD/REP helicase N-terminal domain SHYC_RS09200 PF12705 PD-(D/E)XK nuclease superfamily SHYC_RS09200 PF13361 UvrD-like helicase C-terminal domain SHYC_RS09205 PF12705 PD-(D/E)XK nuclease superfamily SHYC_RS09205 PF13361 UvrD-like helicase C-terminal domain SHYC_RS09210 PF00717 Peptidase S24-like SHYC_RS09215 PF00717 Peptidase S24-like SHYC_RS09220 PF00342 Phosphoglucose isomerase SHYC_RS09225 PF00764 Arginosuccinate synthase SHYC_RS09230 PF00206 Lyase SHYC_RS09230 PF14698 Argininosuccinate lyase C-terminal SHYC_RS09235 PF03009 Glycerophosphoryl diester phosphodiesterase family SHYC_RS09240 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SHYC_RS09240 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain SHYC_RS09245 PF00202 Aminotransferase class-III SHYC_RS09250 PF00171 Aldehyde dehydrogenase family SHYC_RS09255 PF00575 S1 RNA binding domain SHYC_RS09260 PF08958 Domain of unknown function (DUF1871) SHYC_RS09265 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD SHYC_RS09270 PF08810 Kinase associated protein B SHYC_RS09275 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains SHYC_RS09275 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SHYC_RS09275 PF13244 SHYC_RS09275 SHYC_RS09280 PF04039 SHYC_RS09280 SHYC_RS09285 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SHYC_RS09290 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains SHYC_RS09295 PF01899 SHYC_RS09295 SHYC_RS09300 PF04066 SHYC_RS09300 SHYC_RS09305 PF03334 SHYC_RS09305 SHYC_RS09310 PF01522 Polysaccharide deacetylase SHYC_RS09315 PF03061 Thioesterase superfamily SHYC_RS09320 PF03553 SHYC_RS09320 SHYC_RS09320 PF13726 SHYC_RS09320 SHYC_RS09325 PF00883 Cytosol aminopeptidase family, catalytic domain SHYC_RS09325 PF02789 Cytosol aminopeptidase family, N-terminal domain SHYC_RS09330 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS09335 PF01521 Iron-sulphur cluster biosynthesis SHYC_RS09340 PF07293 SHYC_RS09340 SHYC_RS09345 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS09350 PF07315 Protein of unknown function (DUF1462) SHYC_RS09355 PF01106 NifU-like domain SHYC_RS09360 PF04914 DltD C-terminal region SHYC_RS09360 PF04915 DltD N-terminal region SHYC_RS09360 PF04918 DltD central region SHYC_RS09365 PF00550 Phosphopantetheine attachment site SHYC_RS09370 PF03062 SHYC_RS09370 SHYC_RS09375 PF00501 AMP-binding enzyme SHYC_RS09375 PF13193 AMP-binding enzyme C-terminal domain SHYC_RS09380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain SHYC_RS09380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain SHYC_RS09385 PF13242 HAD-hyrolase-like SHYC_RS09385 PF13344 Haloacid dehalogenase-like hydrolase SHYC_RS09390 PF01934 Protein of unknown function DUF86 SHYC_RS09395 PF11256 SHYC_RS09395 SHYC_RS09400 PF06265 Protein of unknown function (DUF1027) SHYC_RS09405 PF04055 Radical SAM superfamily SHYC_RS09405 PF16881 SHYC_RS09405 SHYC_RS09410 PF00149 Calcineurin-like phosphoesterase SHYC_RS09410 PF02872 5'-nucleotidase, C-terminal domain SHYC_RS09415 PF01925 SHYC_RS09415 SHYC_RS09420 PF01904 Protein of unknown function DUF72 SHYC_RS09425 PF01595 SHYC_RS09425 SHYC_RS09430 PF01458 Uncharacterized protein family (UPF0051) SHYC_RS09435 PF01592 NifU-like N terminal domain SHYC_RS09440 PF00266 Aminotransferase class-V SHYC_RS09445 PF01458 Uncharacterized protein family (UPF0051) SHYC_RS09450 PF00005 ABC transporter SHYC_RS09455 PF04018 SHYC_RS09455 SHYC_RS09460 PF03180 NLPA lipoprotein SHYC_RS09465 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS09470 PF00005 ABC transporter SHYC_RS09470 PF09383 NIL domain SHYC_RS09475 PF00085 Thioredoxin SHYC_RS09480 PF01751 Toprim domain SHYC_RS09485 PF01597 Glycine cleavage H-protein SHYC_RS09490 PF03960 ArsC family SHYC_RS09495 PF00085 Thioredoxin SHYC_RS09500 PF00881 Nitroreductase family SHYC_RS09505 PF01487 Type I 3-dehydroquinase SHYC_RS09510 PF13420 Acetyltransferase (GNAT) domain SHYC_RS09515 PF08349 SHYC_RS09515 SHYC_RS09520 PF07690 Major Facilitator Superfamily SHYC_RS09530 PF01668 SmpB protein SHYC_RS09535 PF00575 S1 RNA binding domain SHYC_RS09535 PF00773 RNB domain SHYC_RS09535 PF08206 Ribonuclease B OB domain SHYC_RS09540 PF12146 Putative lysophospholipase SHYC_RS09545 PF03840 Preprotein translocase SecG subunit SHYC_RS09555 PF00113 Enolase, C-terminal TIM barrel domain SHYC_RS09555 PF03952 Enolase, N-terminal domain SHYC_RS09560 PF01676 Metalloenzyme superfamily SHYC_RS09560 PF06415 BPG-independent PGAM N-terminus (iPGM_N) SHYC_RS09565 PF00121 Triosephosphate isomerase SHYC_RS09570 PF00162 Phosphoglycerate kinase SHYC_RS09575 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SHYC_RS09575 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain SHYC_RS09580 PF04198 Putative sugar-binding domain SHYC_RS09590 PF15179 SHYC_RS09590 SHYC_RS09590 PF16228 SHYC_RS09590 SHYC_RS09595 PF01370 NAD dependent epimerase/dehydratase family SHYC_RS09595 PF08338 Domain of unknown function (DUF1731) SHYC_RS09600 PF13420 Acetyltransferase (GNAT) domain SHYC_RS09605 PF01447 Thermolysin metallopeptidase, catalytic domain SHYC_RS09605 PF02868 Thermolysin metallopeptidase, alpha-helical domain SHYC_RS09605 PF03413 Peptidase propeptide and YPEB domain SHYC_RS09605 PF07504 Fungalysin/Thermolysin Propeptide Motif SHYC_RS09610 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SHYC_RS09615 PF05154 SHYC_RS09615 SHYC_RS09620 PF00313 'Cold-shock' DNA-binding domain SHYC_RS09635 PF00574 Clp protease SHYC_RS09640 PF02650 WhiA C-terminal HTH domain SHYC_RS09640 PF10298 WhiA N-terminal LAGLIDADG-like domain SHYC_RS09640 PF14527 WhiA LAGLIDADG-like domain SHYC_RS09645 PF01933 Uncharacterised protein family UPF0052 SHYC_RS09650 PF03668 SHYC_RS09650 SHYC_RS09655 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS09660 PF14559 Tetratricopeptide repeat SHYC_RS09665 PF00132 Bacterial transferase hexapeptide (six repeats) SHYC_RS09670 PF01790 SHYC_RS09670 SHYC_RS09675 PF02603 HPr Serine kinase N terminus SHYC_RS09675 PF07475 HPr Serine kinase C-terminal domain SHYC_RS09685 PF00005 ABC transporter SHYC_RS09690 PF00271 Helicase conserved C-terminal domain SHYC_RS09690 PF02151 UvrB/uvrC motif SHYC_RS09690 PF04851 Type III restriction enzyme, res subunit SHYC_RS09690 PF12344 Ultra-violet resistance protein B SHYC_RS09695 PF09964 SHYC_RS09695 SHYC_RS09700 PF12917 HD containing hydrolase-like enzyme SHYC_RS09710 PF00472 RF-1 domain SHYC_RS09710 PF03462 PCRF domain SHYC_RS09715 PF01043 SecA preprotein cross-linking domain SHYC_RS09715 PF02810 SEC-C motif SHYC_RS09715 PF07516 SecA Wing and Scaffold domain SHYC_RS09715 PF07517 SecA DEAD-like domain SHYC_RS09720 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein SHYC_RS09720 PF16321 SHYC_RS09720 SHYC_RS09730 PF00271 Helicase conserved C-terminal domain SHYC_RS09730 PF04851 Type III restriction enzyme, res subunit SHYC_RS09735 PF02645 Uncharacterised protein, DegV family COG1307 SHYC_RS09740 PF01205 Uncharacterized protein family UPF0029 SHYC_RS09740 PF09186 Domain of unknown function (DUF1949) SHYC_RS09745 PF00953 Glycosyl transferase family 4 SHYC_RS09750 PF05543 Staphopain peptidase C47 SHYC_RS09750 PF14731 Staphopain proregion SHYC_RS09755 PF09022 Staphostatin A SHYC_RS09760 PF00990 GGDEF domain SHYC_RS09760 PF07694 5TMR of 5TMR-LYT SHYC_RS09765 PF06738 SHYC_RS09765 SHYC_RS09770 PF12821 SHYC_RS09770 SHYC_RS09775 PF01546 Peptidase family M20/M25/M40 SHYC_RS09775 PF07687 Peptidase dimerisation domain SHYC_RS09780 PF02595 Glycerate kinase family SHYC_RS09785 PF11009 Protein of unknown function (DUF2847) SHYC_RS09795 PF04229 GrpB protein SHYC_RS09800 PF01565 FAD binding domain SHYC_RS09800 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain SHYC_RS09805 PF05495 CHY zinc finger SHYC_RS09810 PF00268 Ribonucleotide reductase, small chain SHYC_RS09815 PF00317 Ribonucleotide reductase, all-alpha domain SHYC_RS09815 PF02867 Ribonucleotide reductase, barrel domain SHYC_RS09815 PF08343 Ribonucleotide reductase N-terminal SHYC_RS09820 PF07972 NrdI Flavodoxin like SHYC_RS09825 PF00892 EamA-like transporter family SHYC_RS09830 PF14489 QueF-like protein SHYC_RS09835 PF00854 POT family SHYC_RS09840 PF00781 Diacylglycerol kinase catalytic domain SHYC_RS09845 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) SHYC_RS09850 PF00155 Aminotransferase class I and II SHYC_RS09855 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS09855 PF04069 Substrate binding domain of ABC-type glycine betaine transport system SHYC_RS09860 PF00005 ABC transporter SHYC_RS09865 PF00270 DEAD/DEAH box helicase SHYC_RS09865 PF00271 Helicase conserved C-terminal domain SHYC_RS09865 PF00570 HRDC domain SHYC_RS09865 PF09382 RQC domain SHYC_RS09865 PF16124 SHYC_RS09865 SHYC_RS09870 PF00005 ABC transporter SHYC_RS09870 PF12848 ABC transporter SHYC_RS09870 PF16326 SHYC_RS09870 SHYC_RS09875 PF02535 SHYC_RS09875 SHYC_RS09880 PF00884 Sulfatase SHYC_RS09885 PF02626 Allophanate hydrolase subunit 2 SHYC_RS09890 PF02682 Allophanate hydrolase subunit 1 SHYC_RS09900 PF01063 Aminotransferase class IV SHYC_RS09905 PF00425 chorismate binding enzyme SHYC_RS09910 PF00117 Glutamine amidotransferase class-I SHYC_RS09915 PF06508 Queuosine biosynthesis protein QueC SHYC_RS09920 PF01242 6-pyruvoyl tetrahydropterin synthase SHYC_RS09925 PF04055 Radical SAM superfamily SHYC_RS09925 PF13353 4Fe-4S single cluster domain SHYC_RS09935 PF04226 SHYC_RS09935 SHYC_RS09940 PF00535 Glycosyl transferase family 2 SHYC_RS09945 PF00571 CBS domain SHYC_RS09945 PF01595 SHYC_RS09945 SHYC_RS09945 PF03471 Transporter associated domain SHYC_RS09950 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 SHYC_RS09950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit SHYC_RS09950 PF02378 Phosphotransferase system, EIIC SHYC_RS09955 PF00294 pfkB family carbohydrate kinase SHYC_RS09960 PF00455 SHYC_RS09960 SHYC_RS09960 PF08220 DeoR-like helix-turn-helix domain SHYC_RS09965 PF04073 Aminoacyl-tRNA editing domain SHYC_RS09970 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SHYC_RS09975 PF07690 Major Facilitator Superfamily SHYC_RS09980 PF07099 SHYC_RS09980 SHYC_RS09990 PF02517 CAAX protease self-immunity SHYC_RS09995 PF00056 lactate/malate dehydrogenase, NAD binding domain SHYC_RS09995 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain SHYC_RS10005 PF00248 Aldo/keto reductase family SHYC_RS10010 PF02492 CobW/HypB/UreG, nucleotide-binding domain SHYC_RS10010 PF07683 Cobalamin synthesis protein cobW C-terminal domain SHYC_RS10015 PF01047 MarR family SHYC_RS10020 PF00005 ABC transporter SHYC_RS10025 PF00005 ABC transporter SHYC_RS10025 PF00664 ABC transporter transmembrane region SHYC_RS10030 PF02673 SHYC_RS10030 SHYC_RS10035 PF02517 CAAX protease self-immunity SHYC_RS10040 PF07681 SHYC_RS10040 SHYC_RS10050 PF02639 SHYC_RS10050 SHYC_RS10055 PF03641 Possible lysine decarboxylase SHYC_RS10060 PF13302 Acetyltransferase (GNAT) domain SHYC_RS10075 PF13673 Acetyltransferase (GNAT) domain SHYC_RS10080 PF06570 SHYC_RS10080 SHYC_RS10085 PF04306 SHYC_RS10085 SHYC_RS10090 PF07690 Major Facilitator Superfamily SHYC_RS10095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SHYC_RS10095 PF03466 LysR substrate binding domain SHYC_RS10100 PF04167 Protein of unknown function (DUF402) SHYC_RS10105 PF01709 Transcriptional regulator SHYC_RS10110 PF00899 ThiF family SHYC_RS10115 PF05690 Thiazole biosynthesis protein ThiG SHYC_RS10120 PF02597 ThiS family SHYC_RS10125 PF02581 Thiamine monophosphate synthase/TENI SHYC_RS10130 PF01027 Inhibitor of apoptosis-promoting Bax1 SHYC_RS10135 PF01476 LysM domain SHYC_RS10135 PF05257 CHAP domain SHYC_RS10140 PF13302 Acetyltransferase (GNAT) domain SHYC_RS10145 PF00665 Integrase core domain SHYC_RS10145 PF13276 SHYC_RS10145 SHYC_RS10155 PF01384 SHYC_RS10155 SHYC_RS10160 PF01865 Protein of unknown function DUF47 SHYC_RS10165 PF13460 NADH(P)-binding SHYC_RS10170 PF13420 Acetyltransferase (GNAT) domain SHYC_RS10175 PF07859 alpha/beta hydrolase fold SHYC_RS10185 PF07690 Major Facilitator Superfamily SHYC_RS10195 PF01032 FecCD transport family SHYC_RS10200 PF01032 FecCD transport family SHYC_RS10205 PF00005 ABC transporter SHYC_RS10210 PF02588 SHYC_RS10210 SHYC_RS10210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) SHYC_RS10215 PF01773 Na+ dependent nucleoside transporter N-terminus SHYC_RS10215 PF07662 Na+ dependent nucleoside transporter C-terminus SHYC_RS10220 PF04023 FeoA domain SHYC_RS10225 PF02421 Ferrous iron transport protein B SHYC_RS10225 PF07664 SHYC_RS10225 SHYC_RS10225 PF07670 Nucleoside recognition SHYC_RS10230 PF12669 SHYC_RS10230 SHYC_RS10235 PF00005 ABC transporter SHYC_RS10235 PF00664 ABC transporter transmembrane region SHYC_RS10240 PF00768 D-alanyl-D-alanine carboxypeptidase SHYC_RS10240 PF09211 Domain of unknown function (DUF1958) SHYC_RS10245 PF01467 Cytidylyltransferase SHYC_RS10250 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase SHYC_RS10255 PF01061 SHYC_RS10255 SHYC_RS10260 PF00005 ABC transporter SHYC_RS10265 PF03808 SHYC_RS10265 SHYC_RS10270 PF13398 Peptidase M50B-like SHYC_RS10275 PF01325 Iron dependent repressor, N-terminal DNA binding domain SHYC_RS10275 PF02742 Iron dependent repressor, metal binding and dimerisation domain SHYC_RS10275 PF04023 FeoA domain SHYC_RS10280 PF00005 ABC transporter SHYC_RS10285 PF00950 SHYC_RS10285 SHYC_RS10290 PF01297 Periplasmic solute binding protein family SHYC_RS10295 PF03334 SHYC_RS10295 SHYC_RS10300 PF04066 SHYC_RS10300 SHYC_RS10305 PF01899 SHYC_RS10305 SHYC_RS10310 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains SHYC_RS10315 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L SHYC_RS10320 PF04039 SHYC_RS10320 SHYC_RS10325 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains SHYC_RS10325 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus SHYC_RS10325 PF13244 SHYC_RS10325 SHYC_RS10330 PF00589 Phage integrase family SHYC_RS10335 PF07872 SHYC_RS10335 SHYC_RS10340 PF11148 SHYC_RS10340 SHYC_RS10355 PF13463 Winged helix DNA-binding domain SHYC_RS10370 PF00561 alpha/beta hydrolase fold SHYC_RS10375 PF13419 Haloacid dehalogenase-like hydrolase SHYC_RS10380 PF01032 FecCD transport family SHYC_RS10385 PF01497 Periplasmic binding protein SHYC_RS10390 PF00750 tRNA synthetases class I (R) SHYC_RS10390 PF03485 Arginyl tRNA synthetase N terminal domain SHYC_RS10390 PF05746 DALR anticodon binding domain SHYC_RS10395 PF09148 Domain of unknown function (DUF1934) SHYC_RS10400 PF08741 SHYC_RS10400 SHYC_RS10405 PF01966 HD domain SHYC_RS10410 PF13673 Acetyltransferase (GNAT) domain SHYC_RS10415 PF03358 NADPH-dependent FMN reductase SHYC_RS10420 PF07293 SHYC_RS10420 SHYC_RS10425 PF00939 Sodium:sulfate symporter transmembrane region SHYC_RS10430 PF12821 SHYC_RS10430 SHYC_RS10435 PF06738 SHYC_RS10435 SHYC_RS10440 PF13520 Amino acid permease SHYC_RS10445 PF06778 Chlorite dismutase SHYC_RS10450 PF01515 Phosphate acetyl/butaryl transferase SHYC_RS10455 PF03099 Biotin/lipoate A/B protein ligase family SHYC_RS10460 PF07690 Major Facilitator Superfamily SHYC_RS10465 PF13437 HlyD family secretion protein SHYC_RS10465 PF13533 Biotin-lipoyl like SHYC_RS10470 PF00440 Bacterial regulatory proteins, tetR family SHYC_RS10475 PF13302 Acetyltransferase (GNAT) domain SHYC_RS10480 PF13520 Amino acid permease SHYC_RS10485 PF04241 SHYC_RS10485 SHYC_RS10495 PF03167 Uracil DNA glycosylase superfamily SHYC_RS10500 PF08543 Phosphomethylpyrimidine kinase SHYC_RS10520 PF00108 Thiolase, N-terminal domain SHYC_RS10520 PF02803 Thiolase, C-terminal domain SHYC_RS10525 PF00501 AMP-binding enzyme SHYC_RS10530 PF01380 SIS domain SHYC_RS10535 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family SHYC_RS10540 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase SHYC_RS10545 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase SHYC_RS10550 PF00367 phosphotransferase system, EIIB SHYC_RS10550 PF02378 Phosphotransferase system, EIIC SHYC_RS10555 PF01380 SIS domain SHYC_RS10555 PF01418 Helix-turn-helix domain, rpiR family SHYC_RS10560 PF08830 Protein of unknown function (DUF1806) SHYC_RS10565 PF02585 GlcNAc-PI de-N-acetylase SHYC_RS10570 PF02649 Type I GTP cyclohydrolase folE2 SHYC_RS10575 PF03358 NADPH-dependent FMN reductase SHYC_RS10580 PF08282 haloacid dehalogenase-like hydrolase SHYC_RS10585 PF14437 SHYC_RS10585 SHYC_RS10590 PF01712 Deoxynucleoside kinase SHYC_RS10595 PF01712 Deoxynucleoside kinase SHYC_RS10600 PF13419 Haloacid dehalogenase-like hydrolase SHYC_RS10610 PF01063 Aminotransferase class IV SHYC_RS10615 PF01370 NAD dependent epimerase/dehydratase family SHYC_RS10620 PF00155 Aminotransferase class I and II SHYC_RS10625 PF01546 Peptidase family M20/M25/M40 SHYC_RS10625 PF07687 Peptidase dimerisation domain SHYC_RS10630 PF00009 Elongation factor Tu GTP binding domain SHYC_RS10630 PF03143 Elongation factor Tu C-terminal domain SHYC_RS10630 PF03144 Elongation factor Tu domain 2 SHYC_RS10635 PF00009 Elongation factor Tu GTP binding domain SHYC_RS10635 PF00679 Elongation factor G C-terminus SHYC_RS10635 PF03144 Elongation factor Tu domain 2 SHYC_RS10635 PF03764 Elongation factor G, domain IV SHYC_RS10635 PF14492 Elongation Factor G, domain II SHYC_RS10640 PF00177 Ribosomal protein S7p/S5e SHYC_RS10645 PF00164 Ribosomal protein S12/S23 SHYC_RS10650 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family SHYC_RS10655 PF00623 RNA polymerase Rpb1, domain 2 SHYC_RS10655 PF04983 RNA polymerase Rpb1, domain 3 SHYC_RS10655 PF04997 RNA polymerase Rpb1, domain 1 SHYC_RS10655 PF04998 RNA polymerase Rpb1, domain 5 SHYC_RS10655 PF05000 RNA polymerase Rpb1, domain 4 SHYC_RS10660 PF00562 RNA polymerase Rpb2, domain 6 SHYC_RS10660 PF04560 RNA polymerase Rpb2, domain 7 SHYC_RS10660 PF04561 RNA polymerase Rpb2, domain 2 SHYC_RS10660 PF04563 RNA polymerase beta subunit SHYC_RS10660 PF04565 RNA polymerase Rpb2, domain 3 SHYC_RS10660 PF10385 RNA polymerase beta subunit external 1 domain SHYC_RS10665 PF05175 Methyltransferase small domain SHYC_RS10670 PF00542 Ribosomal protein L7/L12 C-terminal domain SHYC_RS10670 PF16320 SHYC_RS10670 SHYC_RS10675 PF00466 Ribosomal protein L10 SHYC_RS10680 PF00687 Ribosomal protein L1p/L10e family SHYC_RS10685 PF00298 Ribosomal protein L11, RNA binding domain SHYC_RS10685 PF03946 Ribosomal protein L11, N-terminal domain SHYC_RS10690 PF00467 KOW motif SHYC_RS10690 PF02357 Transcription termination factor nusG SHYC_RS10695 PF00584 SecE/Sec61-gamma subunits of protein translocation complex SHYC_RS10705 PF05991 SHYC_RS10705 SHYC_RS10710 PF00588 SpoU rRNA Methylase family SHYC_RS10710 PF08032 RNA 2'-O ribose methyltransferase substrate binding SHYC_RS10715 PF00636 Ribonuclease III domain SHYC_RS10720 PF01406 tRNA synthetases class I (C) catalytic domain SHYC_RS10720 PF09190 DALR domain SHYC_RS10725 PF00132 Bacterial transferase hexapeptide (six repeats) SHYC_RS10730 PF00749 tRNA synthetases class I (E and Q), catalytic domain SHYC_RS10735 PF02542 YgbB family SHYC_RS10740 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase SHYC_RS10750 PF13481 AAA domain SHYC_RS10750 PF13541 Subunit ChlI of Mg-chelatase SHYC_RS10755 PF00004 ATPase family associated with various cellular activities (AAA) SHYC_RS10755 PF02151 UvrB/uvrC motif SHYC_RS10755 PF02861 Clp amino terminal domain SHYC_RS10755 PF07724 AAA domain (Cdc48 subfamily) SHYC_RS10755 PF10431 C-terminal, D2-small domain, of ClpB protein SHYC_RS10760 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain SHYC_RS10765 PF02151 UvrB/uvrC motif SHYC_RS10770 PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) SHYC_RS10775 PF01773 Na+ dependent nucleoside transporter N-terminus SHYC_RS10775 PF07662 Na+ dependent nucleoside transporter C-terminus SHYC_RS10775 PF07670 Nucleoside recognition SHYC_RS10780 PF01174 SNO glutamine amidotransferase family SHYC_RS10785 PF01680 SOR/SNZ family SHYC_RS10790 PF00155 Aminotransferase class I and II SHYC_RS10790 PF00392 Bacterial regulatory proteins, gntR family SHYC_RS10795 PF13515 SHYC_RS10795 SHYC_RS10880 PF00152 tRNA synthetases class II (D, K and N) SHYC_RS10880 PF01336 OB-fold nucleic acid binding domain SHYC_RS10885 PF01207 Dihydrouridine synthase (Dus) SHYC_RS10890 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) SHYC_RS10895 PF02152 Dihydroneopterin aldolase SHYC_RS10900 PF00809 Pterin binding enzyme SHYC_RS10905 PF00291 Pyridoxal-phosphate dependent enzyme SHYC_RS10910 PF01430 Hsp33 protein SHYC_RS10915 PF00004 ATPase family associated with various cellular activities (AAA) SHYC_RS10915 PF01434 Peptidase family M41 SHYC_RS10915 PF06480 FtsH Extracellular SHYC_RS10920 PF00156 Phosphoribosyl transferase domain SHYC_RS10925 PF01171 PP-loop family SHYC_RS10925 PF11734 TilS substrate C-terminal domain SHYC_RS10930 PF00575 S1 RNA binding domain SHYC_RS10935 PF04977 Septum formation initiator SHYC_RS10940 PF01479 S4 domain SHYC_RS10945 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SHYC_RS10945 PF03819 MazG nucleotide pyrophosphohydrolase domain SHYC_RS10950 PF01943 SHYC_RS10950 SHYC_RS10950 PF14667 Polysaccharide biosynthesis C-terminal domain SHYC_RS10955 PF00270 DEAD/DEAH box helicase SHYC_RS10955 PF00271 Helicase conserved C-terminal domain SHYC_RS10955 PF02559 CarD-like/TRCF domain SHYC_RS10955 PF03461 TRCF domain SHYC_RS10960 PF01195 Peptidyl-tRNA hydrolase SHYC_RS10965 PF01386 Ribosomal L25p family SHYC_RS10965 PF14693 Ribosomal protein TL5, C-terminal domain SHYC_RS10970 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase SHYC_RS10970 PF14572 Phosphoribosyl synthetase-associated domain SHYC_RS10975 PF00132 Bacterial transferase hexapeptide (six repeats) SHYC_RS10975 PF12804 MobA-like NTP transferase domain SHYC_RS10980 PF04026 SpoVG SHYC_RS10985 PF01042 Endoribonuclease L-PSP SHYC_RS10990 PF00156 Phosphoribosyl transferase domain SHYC_RS10990 PF09182 Bacterial purine repressor, N-terminal SHYC_RS10995 PF00288 GHMP kinases N terminal domain SHYC_RS10995 PF08544 GHMP kinases C terminal SHYC_RS11000 PF06257 Protein of unknown function (DUF1021) SHYC_RS11005 PF00398 Ribosomal RNA adenine dimethylase SHYC_RS11010 PF13331 SHYC_RS11010 SHYC_RS11015 PF01026 TatD related DNase SHYC_RS11020 PF01588 Putative tRNA binding domain SHYC_RS11020 PF08264 Anticodon-binding domain of tRNA SHYC_RS11020 PF09334 tRNA synthetases class I (M) SHYC_RS11025 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases SHYC_RS11030 PF01541 GIY-YIG catalytic domain SHYC_RS11035 PF05175 Methyltransferase small domain SHYC_RS11040 PF06156 SHYC_RS11040 SHYC_RS11045 PF04468 SHYC_RS11045 SHYC_RS11050 PF13177 DNA polymerase III, delta subunit SHYC_RS11055 PF06153 Protein of unknown function (DUF970) SHYC_RS11060 PF02223 Thymidylate kinase SHYC_RS11065 PF01276 Orn/Lys/Arg decarboxylase, major domain SHYC_RS11065 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain SHYC_RS11090 PF02132 RecR protein SHYC_RS11090 PF13662 Toprim domain SHYC_RS11095 PF02575 YbaB/EbfC DNA-binding family SHYC_RS11100 PF12169 DNA polymerase III subunits gamma and tau domain III SHYC_RS11100 PF13177 DNA polymerase III, delta subunit SHYC_RS11105 PF00583 Acetyltransferase (GNAT) family SHYC_RS11110 PF00392 Bacterial regulatory proteins, gntR family SHYC_RS11110 PF07702 UTRA domain SHYC_RS11115 PF00128 Alpha amylase, catalytic domain SHYC_RS11120 PF00367 phosphotransferase system, EIIB SHYC_RS11120 PF02378 Phosphotransferase system, EIIC SHYC_RS11130 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS11130 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster SHYC_RS11135 PF00310 Glutamine amidotransferases class-II SHYC_RS11135 PF01493 GXGXG motif SHYC_RS11135 PF01645 Conserved region in glutamate synthase SHYC_RS11135 PF04898 Glutamate synthase central domain SHYC_RS11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family SHYC_RS11140 PF03466 LysR substrate binding domain SHYC_RS11145 PF07907 SHYC_RS11145 SHYC_RS11150 PF07907 SHYC_RS11150 SHYC_RS11155 PF00005 ABC transporter SHYC_RS11170 PF01476 LysM domain SHYC_RS11170 PF05257 CHAP domain SHYC_RS11175 PF01053 Cys/Met metabolism PLP-dependent enzyme SHYC_RS11180 PF00291 Pyridoxal-phosphate dependent enzyme SHYC_RS11185 PF13508 Acetyltransferase (GNAT) domain SHYC_RS11190 PF00135 Carboxylesterase family SHYC_RS11195 PF00209 Sodium:neurotransmitter symporter family SHYC_RS11200 PF03618 SHYC_RS11200 SHYC_RS11205 PF00391 PEP-utilising enzyme, mobile domain SHYC_RS11205 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain SHYC_RS11205 PF02896 PEP-utilising enzyme, TIM barrel domain SHYC_RS11220 PF16883 SHYC_RS11220 SHYC_RS11230 PF16895 SHYC_RS11230 SHYC_RS11235 PF16895 SHYC_RS11235 SHYC_RS11240 PF16882 SHYC_RS11240 SHYC_RS11245 PF04740 SHYC_RS11245 SHYC_RS11250 PF16888 SHYC_RS11250 SHYC_RS11260 PF01580 FtsK/SpoIIIE family SHYC_RS11260 PF12538 DNA transporter SHYC_RS11265 PF10140 WXG100 protein secretion system (Wss), protein YukC SHYC_RS11270 PF08817 WXG100 protein secretion system (Wss), protein YukD SHYC_RS11275 PF10661 SHYC_RS11275 SHYC_RS11285 PF06013 Proteins of 100 residues with WXG SHYC_RS11290 PF05257 CHAP domain SHYC_RS11295 PF02261 Aspartate decarboxylase SHYC_RS11300 PF02569 Pantoate-beta-alanine ligase SHYC_RS11305 PF02548 Ketopantoate hydroxymethyltransferase SHYC_RS11310 PF02558 Ketopantoate reductase PanE/ApbA SHYC_RS11310 PF08546 Ketopantoate reductase PanE/ApbA C terminal SHYC_RS11325 PF00893 Small Multidrug Resistance protein SHYC_RS11330 PF00893 Small Multidrug Resistance protein SHYC_RS11340 PF07690 Major Facilitator Superfamily SHYC_RS11345 PF00005 ABC transporter SHYC_RS11350 PF00005 ABC transporter SHYC_RS11355 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS11355 PF12911 SHYC_RS11355 SHYC_RS11360 PF00528 Binding-protein-dependent transport system inner membrane component SHYC_RS11365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle SHYC_RS11370 PF10100 SHYC_RS11370 SHYC_RS11390 PF13419 Haloacid dehalogenase-like hydrolase SHYC_RS11395 PF08764 Staphylococcus aureus coagulase SHYC_RS11400 PF08764 Staphylococcus aureus coagulase SHYC_RS11405 PF00089 Trypsin SHYC_RS11410 PF01497 Periplasmic binding protein SHYC_RS11420 PF03992 Antibiotic biosynthesis monooxygenase SHYC_RS11425 PF04304 SHYC_RS11425 SHYC_RS11430 PF13273 SHYC_RS11430 SHYC_RS11435 PF02278 Polysaccharide lyase family 8, super-sandwich domain SHYC_RS11435 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain SHYC_RS11435 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain SHYC_RS11440 PF01944 SHYC_RS11440 SHYC_RS11445 PF00367 phosphotransferase system, EIIB SHYC_RS11445 PF02378 Phosphotransferase system, EIIC SHYC_RS11450 PF00294 pfkB family carbohydrate kinase SHYC_RS11455 PF00356 Bacterial regulatory proteins, lacI family SHYC_RS11455 PF13377 Periplasmic binding protein-like domain SHYC_RS11460 PF02037 SAP domain SHYC_RS11470 PF09860 SHYC_RS11470 SHYC_RS11475 PF03595 Voltage-dependent anion channel SHYC_RS11485 PF04326 Divergent AAA domain SHYC_RS11485 PF13749 ATP-dependent DNA helicase recG C-terminal SHYC_RS11490 PF00117 Glutamine amidotransferase class-I SHYC_RS11490 PF00958 GMP synthase C terminal domain SHYC_RS11490 PF03054 tRNA methyl transferase SHYC_RS11495 PF00478 IMP dehydrogenase / GMP reductase domain SHYC_RS11495 PF00571 CBS domain SHYC_RS11500 PF00860 Permease family SHYC_RS11505 PF00156 Phosphoribosyl transferase domain SHYC_RS11510 PF11181 SHYC_RS11510 SHYC_RS11525 PF01266 FAD dependent oxidoreductase SHYC_RS11530 PF00375 Sodium:dicarboxylate symporter family SHYC_RS11535 PF00881 Nitroreductase family SHYC_RS11545 PF00578 AhpC/TSA family SHYC_RS11545 PF10417 C-terminal domain of 1-Cys peroxiredoxin SHYC_RS11550 PF07992 Pyridine nucleotide-disulphide oxidoreductase SHYC_RS11550 PF13192 Thioredoxin domain SHYC_RS11560 PF06207 SHYC_RS11560 SHYC_RS11565 PF04055 Radical SAM superfamily SHYC_RS11565 PF06968 Biotin and Thiamin Synthesis associated domain SHYC_RS11570 PF02417 SHYC_RS11570 SHYC_RS11575 PF03551 Transcriptional regulator PadR-like family SHYC_RS11580 PF08818 Domain of unknown function (DU1801) SHYC_RS11585 PF02517 CAAX protease self-immunity SHYC_RS11590 PF01084 Ribosomal protein S18 SHYC_RS11595 PF00436 Single-strand binding protein family SHYC_RS11600 PF01250 Ribosomal protein S6 SHYC_RS11605 PF13460 NADH(P)-binding SHYC_RS11610 PF01926 50S ribosome-binding GTPase SHYC_RS11610 PF06071 Protein of unknown function (DUF933) SHYC_RS11615 PF06107 SHYC_RS11615 SHYC_RS11620 PF00924 Mechanosensitive ion channel SHYC_RS11625 PF02195 ParB-like nuclease domain SHYC_RS11625 PF08535 KorB domain SHYC_RS11630 PF01053 Cys/Met metabolism PLP-dependent enzyme SHYC_RS11635 PF01053 Cys/Met metabolism PLP-dependent enzyme SHYC_RS11640 PF02219 Methylenetetrahydrofolate reductase SHYC_RS11640 PF02574 Homocysteine S-methyltransferase SHYC_RS11645 PF01717 Cobalamin-independent synthase, Catalytic domain SHYC_RS11645 PF08267 Cobalamin-independent synthase, N-terminal domain SHYC_RS11650 PF04199 Putative cyclase SHYC_RS11655 PF13061 SHYC_RS11655 SHYC_RS11660 PF01810 SHYC_RS11660 SHYC_RS11675 PF01774 UreD urease accessory protein SHYC_RS11680 PF02492 CobW/HypB/UreG, nucleotide-binding domain SHYC_RS11685 PF01730 UreF SHYC_RS11690 PF02814 UreE urease accessory protein, N-terminal domain SHYC_RS11690 PF05194 UreE urease accessory protein, C-terminal domain SHYC_RS11695 PF04264 YceI-like domain SHYC_RS11710 PF14542 GCN5-related N-acetyl-transferase SHYC_RS11715 PF01551 Peptidase family M23 SHYC_RS11720 PF01047 MarR family SHYC_RS11725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily SHYC_RS11730 PF01613 Flavin reductase like domain SHYC_RS11735 PF02230 Phospholipase/Carboxylesterase SHYC_RS11740 PF02195 ParB-like nuclease domain SHYC_RS11745 PF02527 rRNA small subunit methyltransferase G SHYC_RS11750 PF01134 Glucose inhibited division protein A SHYC_RS11750 PF13932 GidA associated domain 3 SHYC_RS11755 PF01926 50S ribosome-binding GTPase SHYC_RS11755 PF10396 GTP-binding protein TrmE N-terminus SHYC_RS11755 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE SHYC_RS11760 PF00825 Ribonuclease P SHYC_RS11765 PF00468 Ribosomal protein L34 SHYC_RS11780 PF00746 SHYC_RS11780 SHYC_RS11780 PF05738 Cna protein B-type domain SHYC_RS11780 PF10425 C-terminus of bacterial fibrinogen-binding adhesin SHYC_RS11790 PF13273 SHYC_RS11790 SHYC_RS11805 PF00746 SHYC_RS11805 SHYC_RS11815 PF03703 SHYC_RS11815 SHYC_RS11830 PF02368 Bacterial Ig-like domain (group 2) SHYC_RS11835 PF07275 Antirestriction protein (ArdA) SHYC_RS11840 PF02811 PHP domain SHYC_RS11840 PF07733 Bacterial DNA polymerase III alpha subunit SHYC_RS11845 PF07733 Bacterial DNA polymerase III alpha subunit SHYC_RS11845 PF14579 Helix-hairpin-helix motif SHYC_RS11850 PF00589 Phage integrase family SHYC_RS11855 PF14657 SHYC_RS11855 SHYC_RS11865 PF06338 SHYC_RS11865 SHYC_RS11875 PF01478 Type IV leader peptidase family SHYC_RS11875 PF06750 SHYC_RS11875 SHYC_RS11880 PF05737 Collagen binding domain SHYC_RS11880 PF05738 Cna protein B-type domain SHYC_RS11890 PF01476 LysM domain SHYC_RS11890 PF05257 CHAP domain SHYC_RS11895 PF13518 Helix-turn-helix domain SHYC_RS11900 PF02796 Helix-turn-helix domain of resolvase SHYC_RS11905 PF16882 SHYC_RS11905