SHYC_RS00005 SM00382 ATPases associated with a variety of cellular activities SHYC_RS00005 SM00760 Bacterial dnaA protein helix-turn-helix domain SHYC_RS00010 SM00480 DNA polymerase III beta subunit SHYC_RS00030 SM00387 Histidine kinase-like ATPases SHYC_RS00030 SM00433 TopoisomeraseII SHYC_RS00035 SM00434 DNA Topoisomerase IV SHYC_RS00135 SM00267 diguanylate cyclase SHYC_RS00150 SM00788 Adenylosuccinate synthetase SHYC_RS00170 SM00448 cheY-homologous receiver domain SHYC_RS00170 SM00862 Transcriptional regulatory protein, C terminal SHYC_RS00175 SM00091 PAS domain SHYC_RS00175 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SHYC_RS00175 SM00387 Histidine kinase-like ATPases SHYC_RS00175 SM00388 His Kinase A (phosphoacceptor) domain SHYC_RS00190 SM00849 Metallo-beta-lactamase superfamily SHYC_RS00195 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SHYC_RS00205 SM00226 Low molecular weight phosphatase family SHYC_RS00240 SM00487 DEAD-like helicases superfamily SHYC_RS00290 SM00382 ATPases associated with a variety of cellular activities SHYC_RS00295 SM00382 ATPases associated with a variety of cellular activities SHYC_RS00300 SM00382 ATPases associated with a variety of cellular activities SHYC_RS00335 SM00387 Histidine kinase-like ATPases SHYC_RS00335 SM00388 His Kinase A (phosphoacceptor) domain SHYC_RS00340 SM00448 cheY-homologous receiver domain SHYC_RS00340 SM00862 Transcriptional regulatory protein, C terminal SHYC_RS00385 SM00470 ParB-like nuclease domain SHYC_RS00400 SM00245 tail specific protease SHYC_RS00415 SM00342 helix_turn_helix, arabinose operon control protein SHYC_RS00530 SM00530 Helix-turn-helix XRE-family like proteins SHYC_RS00605 SM00047 Lysozyme subfamily 2 SHYC_RS00670 SM00530 Helix-turn-helix XRE-family like proteins SHYC_RS00680 SM00345 helix_turn_helix gluconate operon transcriptional repressor SHYC_RS00680 SM00866 SHYC_RS00680 SHYC_RS00700 SM00257 Lysin motif SHYC_RS00710 SM00345 helix_turn_helix gluconate operon transcriptional repressor SHYC_RS00725 SM01133 SHYC_RS00725 SHYC_RS00785 SM00530 Helix-turn-helix XRE-family like proteins SHYC_RS00795 SM00116 Domain in cystathionine beta-synthase and other proteins. SHYC_RS00795 SM00382 ATPases associated with a variety of cellular activities SHYC_RS00885 SM00387 Histidine kinase-like ATPases SHYC_RS00895 SM00448 cheY-homologous receiver domain SHYC_RS00895 SM00862 Transcriptional regulatory protein, C terminal SHYC_RS00900 SM00387 Histidine kinase-like ATPases SHYC_RS00905 SM00382 ATPases associated with a variety of cellular activities SHYC_RS00975 SM00342 helix_turn_helix, arabinose operon control protein SHYC_RS01020 SM00850 LytTr DNA-binding domain SHYC_RS01075 SM00957 SecA DEAD-like domain SHYC_RS01075 SM00958 SecA preprotein cross-linking domain SHYC_RS01115 SM00882 Coenzyme A transferase SHYC_RS01125 SM00382 ATPases associated with a variety of cellular activities SHYC_RS01155 SM00450 Rhodanese Homology Domain SHYC_RS01160 SM00450 Rhodanese Homology Domain SHYC_RS01160 SM00849 Metallo-beta-lactamase superfamily SHYC_RS01165 SM00354 helix_turn _helix lactose operon repressor SHYC_RS01180 SM00382 ATPases associated with a variety of cellular activities SHYC_RS01240 SM00448 cheY-homologous receiver domain SHYC_RS01240 SM01012 SHYC_RS01240 SHYC_RS01245 SM00387 Histidine kinase-like ATPases SHYC_RS01490 SM00854 Bacterial capsule synthesis protein PGA_cap SHYC_RS01510 SM00155 Phospholipase D. Active site motifs. SHYC_RS01520 SM00387 Histidine kinase-like ATPases SHYC_RS01520 SM00388 His Kinase A (phosphoacceptor) domain SHYC_RS01525 SM00448 cheY-homologous receiver domain SHYC_RS01525 SM00862 Transcriptional regulatory protein, C terminal SHYC_RS01555 SM00098 Alkaline phosphatase homologues SHYC_RS01560 SM00098 Alkaline phosphatase homologues SHYC_RS01655 SM01133 SHYC_RS01655 SHYC_RS01675 SM01120 SHYC_RS01675 SHYC_RS01715 SM00422 helix_turn_helix, mercury resistance SHYC_RS01735 SM00047 Lysozyme subfamily 2 SHYC_RS01815 SM00382 ATPases associated with a variety of cellular activities SHYC_RS01830 SM00448 cheY-homologous receiver domain SHYC_RS01830 SM00862 Transcriptional regulatory protein, C terminal SHYC_RS01835 SM00387 Histidine kinase-like ATPases SHYC_RS01835 SM00388 His Kinase A (phosphoacceptor) domain SHYC_RS01930 SM00382 ATPases associated with a variety of cellular activities SHYC_RS01940 SM00347 helix_turn_helix multiple antibiotic resistance protein SHYC_RS01950 SM00954 Region found in RelA / SpoT proteins SHYC_RS02000 SM01060 SHYC_RS02000 SHYC_RS02195 SM00382 ATPases associated with a variety of cellular activities SHYC_RS02200 SM00382 ATPases associated with a variety of cellular activities SHYC_RS02250 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SHYC_RS02280 SM00382 ATPases associated with a variety of cellular activities SHYC_RS02285 SM00382 ATPases associated with a variety of cellular activities SHYC_RS02385 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SHYC_RS02410 SM00387 Histidine kinase-like ATPases SHYC_RS02415 SM00421 helix_turn_helix, Lux Regulon SHYC_RS02415 SM00448 cheY-homologous receiver domain SHYC_RS02465 SM00342 helix_turn_helix, arabinose operon control protein SHYC_RS02475 SM00347 helix_turn_helix multiple antibiotic resistance protein SHYC_RS02515 SM00829 Enoylreductase SHYC_RS02545 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SHYC_RS02545 SM00387 Histidine kinase-like ATPases SHYC_RS02545 SM00388 His Kinase A (phosphoacceptor) domain SHYC_RS02550 SM00448 cheY-homologous receiver domain SHYC_RS02550 SM00862 Transcriptional regulatory protein, C terminal SHYC_RS02560 SM00382 ATPases associated with a variety of cellular activities SHYC_RS02570 SM00347 helix_turn_helix multiple antibiotic resistance protein SHYC_RS02610 SM00833 Cobalamin synthesis protein cobW C-terminal domain SHYC_RS02620 SM00342 helix_turn_helix, arabinose operon control protein SHYC_RS02645 SM00382 ATPases associated with a variety of cellular activities SHYC_RS02665 SM00530 Helix-turn-helix XRE-family like proteins SHYC_RS02780 SM00420 helix_turn_helix, Deoxyribose operon repressor SHYC_RS02800 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SHYC_RS02800 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SHYC_RS02815 SM00047 Lysozyme subfamily 2 SHYC_RS02900 SM01130 SHYC_RS02900 SHYC_RS02905 SM00345 helix_turn_helix gluconate operon transcriptional repressor SHYC_RS02905 SM00895 SHYC_RS02905 SHYC_RS02940 SM00382 ATPases associated with a variety of cellular activities SHYC_RS02950 SM00852 Probable molybdopterin binding domain SHYC_RS02960 SM00852 Probable molybdopterin binding domain SHYC_RS02985 SM00729 Elongator protein 3, MiaB family, Radical SAM SHYC_RS02995 SM00347 helix_turn_helix multiple antibiotic resistance protein SHYC_RS03045 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SHYC_RS03045 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SHYC_RS03045 SM00493 SHYC_RS03045 SHYC_RS03055 SM01403 SHYC_RS03055 SHYC_RS03075 SM01382 SHYC_RS03075 SHYC_RS03075 SM01383 SHYC_RS03075 SHYC_RS03090 SM00322 K homology RNA-binding domain SHYC_RS03110 SM01374 SHYC_RS03110 SHYC_RS03115 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SHYC_RS03170 SM00316 Ribosomal protein S1-like RNA-binding domain SHYC_RS03190 SM00662 RNA polymerases D SHYC_RS03200 SM00382 ATPases associated with a variety of cellular activities SHYC_RS03205 SM00382 ATPases associated with a variety of cellular activities SHYC_RS03235 SM00422 helix_turn_helix, mercury resistance SHYC_RS03260 SM00420 helix_turn_helix, Deoxyribose operon repressor SHYC_RS03260 SM01134 SHYC_RS03260 SHYC_RS03275 SM01133 SHYC_RS03275 SHYC_RS03295 SM00829 Enoylreductase SHYC_RS03455 SM00382 ATPases associated with a variety of cellular activities SHYC_RS03470 SM00345 helix_turn_helix gluconate operon transcriptional repressor SHYC_RS03470 SM00895 SHYC_RS03470 SHYC_RS03505 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SHYC_RS03590 SM00357 Cold shock protein domain SHYC_RS03590 SM00382 ATPases associated with a variety of cellular activities SHYC_RS03590 SM00959 Rho termination factor, N-terminal domain SHYC_RS03605 SM00937 SHYC_RS03605 SHYC_RS03620 SM00226 Low molecular weight phosphatase family SHYC_RS03680 SM00382 ATPases associated with a variety of cellular activities SHYC_RS03720 SM00257 Lysin motif SHYC_RS03750 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SHYC_RS03755 SM00155 Phospholipase D. Active site motifs. SHYC_RS03795 SM00487 DEAD-like helicases superfamily SHYC_RS03795 SM00490 helicase superfamily c-terminal domain SHYC_RS03820 SM01005 Alanine racemase, C-terminal domain SHYC_RS03835 SM00331 Sigma factor PP2C-like phosphatases SHYC_RS03835 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SHYC_RS03855 SM00316 Ribosomal protein S1-like RNA-binding domain SHYC_RS03855 SM00732 Likely ribonuclease with RNase H fold. SHYC_RS03860 SM00731 SprT homologues. SHYC_RS03905 SM01329 SHYC_RS03905 SHYC_RS03910 SM00917 LeuA allosteric (dimerisation) domain SHYC_RS03965 SM00382 ATPases associated with a variety of cellular activities SHYC_RS03970 SM00881 CoA binding domain SHYC_RS03985 SM00640 Glycosyl hydrolases family 32 SHYC_RS03990 SM00448 cheY-homologous receiver domain SHYC_RS03990 SM00850 LytTr DNA-binding domain SHYC_RS04000 SM00794 Staphylococcal AgrD protein SHYC_RS04005 SM00793 Accessory gene regulator B SHYC_RS04025 SM00883 Chaperonin 10 Kd subunit SHYC_RS04040 SM01022 SHYC_RS04040 SHYC_RS04065 SM00382 ATPases associated with a variety of cellular activities SHYC_RS04075 SM00345 helix_turn_helix gluconate operon transcriptional repressor SHYC_RS04075 SM00895 SHYC_RS04075 SHYC_RS04140 SM01131 SHYC_RS04140 SHYC_RS04185 SM00998 Adenylosuccinate lyase C-terminus SHYC_RS04205 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SHYC_RS04205 SM00292 breast cancer carboxy-terminal domain SHYC_RS04205 SM00532 Ligase N family SHYC_RS04230 SM00845 GatB domain SHYC_RS04235 SM00046 Diacylglycerol kinase catalytic domain (presumed) SHYC_RS04260 SM00479 SHYC_RS04260 SHYC_RS04300 SM00387 Histidine kinase-like ATPases SHYC_RS04305 SM00421 helix_turn_helix, Lux Regulon SHYC_RS04305 SM00448 cheY-homologous receiver domain SHYC_RS04310 SM00947 Carbonic anhydrase SHYC_RS04325 SM00226 Low molecular weight phosphatase family SHYC_RS04395 SM00478 endonuclease III SHYC_RS04395 SM00525 SHYC_RS04395 SHYC_RS04405 SM00382 ATPases associated with a variety of cellular activities SHYC_RS04585 SM00062 Bacterial periplasmic substrate-binding proteins SHYC_RS04590 SM00382 ATPases associated with a variety of cellular activities SHYC_RS04640 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SHYC_RS04645 SM00421 helix_turn_helix, Lux Regulon SHYC_RS04645 SM00448 cheY-homologous receiver domain SHYC_RS05150 SM00318 Staphylococcal nuclease homologues SHYC_RS05205 SM00244 prohibitin homologues SHYC_RS05230 SM00305 Hint (Hedgehog/Intein) domain C-terminal region SHYC_RS05230 SM00306 Hint (Hedgehog/Intein) domain N-terminal region SHYC_RS05270 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains SHYC_RS05275 SM00857 Resolvase, N terminal domain SHYC_RS05310 SM00530 Helix-turn-helix XRE-family like proteins SHYC_RS05335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SHYC_RS05350 SM00347 helix_turn_helix multiple antibiotic resistance protein SHYC_RS05365 SM00382 ATPases associated with a variety of cellular activities SHYC_RS05505 SM01234 SHYC_RS05505 SHYC_RS05580 SM00047 Lysozyme subfamily 2 SHYC_RS05640 SM00729 Elongator protein 3, MiaB family, Radical SAM SHYC_RS05655 SM00450 Rhodanese Homology Domain SHYC_RS05675 SM00363 S4 RNA-binding domain SHYC_RS05705 SM00849 Metallo-beta-lactamase superfamily SHYC_RS05735 SM00843 SHYC_RS05735 SHYC_RS05755 SM00830 Chorismate mutase type II SHYC_RS05760 SM00354 helix_turn _helix lactose operon repressor SHYC_RS05790 SM00363 S4 RNA-binding domain SHYC_RS05800 SM00563 Phosphate acyltransferases SHYC_RS05835 SM00363 S4 RNA-binding domain SHYC_RS05835 SM01390 SHYC_RS05835 SHYC_RS05855 SM00981 SHYC_RS05855 SHYC_RS05895 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SHYC_RS05895 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SHYC_RS05905 SM00849 Metallo-beta-lactamase superfamily SHYC_RS05915 SM00116 Domain in cystathionine beta-synthase and other proteins. SHYC_RS05925 SM00481 DNA polymerase alpha chain like domain SHYC_RS05930 SM00919 Malic enzyme, NAD binding domain SHYC_RS05930 SM01274 SHYC_RS05930 SHYC_RS05960 SM01329 SHYC_RS05960 SHYC_RS05965 SM00448 cheY-homologous receiver domain SHYC_RS05965 SM00862 Transcriptional regulatory protein, C terminal SHYC_RS05970 SM00091 PAS domain SHYC_RS05970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SHYC_RS05970 SM00387 Histidine kinase-like ATPases SHYC_RS05970 SM00388 His Kinase A (phosphoacceptor) domain SHYC_RS05975 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SHYC_RS05975 SM00475 5'-3' exonuclease SHYC_RS05975 SM00482 DNA polymerase A domain SHYC_RS05980 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SHYC_RS05980 SM01232 SHYC_RS05980 SHYC_RS05990 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SHYC_RS06010 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SHYC_RS06050 SM00382 ATPases associated with a variety of cellular activities SHYC_RS06050 SM00994 ClpX C4-type zinc finger SHYC_RS06050 SM01086 C-terminal, D2-small domain, of ClpB protein SHYC_RS06080 SM01004 Delta-aminolevulinic acid dehydratase SHYC_RS06160 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SHYC_RS06165 SM00382 ATPases associated with a variety of cellular activities SHYC_RS06180 SM01323 SHYC_RS06180 SHYC_RS06200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SHYC_RS06200 SM00954 Region found in RelA / SpoT proteins SHYC_RS06210 SM00287 Bacterial SH3 domain homologues SHYC_RS06210 SM00646 SHYC_RS06210 SHYC_RS06230 SM00382 ATPases associated with a variety of cellular activities SHYC_RS06265 SM00028 Tetratricopeptide repeats SHYC_RS06270 SM00382 ATPases associated with a variety of cellular activities SHYC_RS06275 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SHYC_RS06285 SM00732 Likely ribonuclease with RNase H fold. SHYC_RS06320 SM00796 Allophanate hydrolase subunit 1 SHYC_RS06325 SM00797 Allophanate hydrolase subunit 2 SHYC_RS06335 SM00878 Biotin carboxylase C-terminal domain SHYC_RS06370 SM01103 SHYC_RS06370 SHYC_RS06380 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SHYC_RS06395 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SHYC_RS06405 SM00849 Metallo-beta-lactamase superfamily SHYC_RS06420 SM00838 Elongation factor G C-terminus SHYC_RS06425 SM00729 Elongator protein 3, MiaB family, Radical SAM SHYC_RS06445 SM00271 DnaJ molecular chaperone homology domain SHYC_RS06460 SM00729 Elongator protein 3, MiaB family, Radical SAM SHYC_RS06520 SM00116 Domain in cystathionine beta-synthase and other proteins. SHYC_RS06530 SM00400 zinc finger SHYC_RS06530 SM00493 SHYC_RS06530 SHYC_RS06555 SM00487 DEAD-like helicases superfamily SHYC_RS06555 SM00490 helicase superfamily c-terminal domain SHYC_RS06560 SM00518 AP endonuclease family 2 SHYC_RS06565 SM00382 ATPases associated with a variety of cellular activities SHYC_RS06610 SM00382 ATPases associated with a variety of cellular activities SHYC_RS06650 SM00849 Metallo-beta-lactamase superfamily SHYC_RS06705 SM00450 Rhodanese Homology Domain SHYC_RS06730 SM00841 Elongation factor P, C-terminal SHYC_RS06730 SM01185 SHYC_RS06730 SHYC_RS06740 SM00878 Biotin carboxylase C-terminal domain SHYC_RS06770 SM00861 Transketolase, pyrimidine binding domain SHYC_RS06805 SM00861 Transketolase, pyrimidine binding domain SHYC_RS06830 SM01350 SHYC_RS06830 SHYC_RS06835 SM00342 helix_turn_helix, arabinose operon control protein SHYC_RS06835 SM00871 Bacterial transcription activator, effector binding domain SHYC_RS06895 SM00363 S4 RNA-binding domain SHYC_RS06900 SM00448 cheY-homologous receiver domain SHYC_RS06900 SM00862 Transcriptional regulatory protein, C terminal SHYC_RS06905 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SHYC_RS06905 SM00387 Histidine kinase-like ATPases SHYC_RS06905 SM00388 His Kinase A (phosphoacceptor) domain SHYC_RS06925 SM00487 DEAD-like helicases superfamily SHYC_RS06925 SM00490 helicase superfamily c-terminal domain SHYC_RS06930 SM00257 Lysin motif SHYC_RS06940 SM00870 SHYC_RS06940 SHYC_RS06950 SM00316 Ribosomal protein S1-like RNA-binding domain SHYC_RS06965 SM00411 bacterial (prokaryotic) histone like domain SHYC_RS06985 SM00562 SHYC_RS06985 SHYC_RS07005 SM00028 Tetratricopeptide repeats SHYC_RS07045 SM00479 SHYC_RS07045 SHYC_RS07045 SM00487 DEAD-like helicases superfamily SHYC_RS07045 SM00491 SHYC_RS07045 SHYC_RS07060 SM00478 endonuclease III SHYC_RS07060 SM00525 SHYC_RS07060 SHYC_RS07095 SM00981 SHYC_RS07095 SHYC_RS07110 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SHYC_RS07110 SM00475 5'-3' exonuclease SHYC_RS07130 SM00567 E-Z type HEAT repeats SHYC_RS07130 SM00932 Scaffold protein Nfu/NifU N terminal SHYC_RS07175 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SHYC_RS07175 SM00245 tail specific protease SHYC_RS07190 SM00014 Acid phosphatase homologues SHYC_RS07195 SM00448 cheY-homologous receiver domain SHYC_RS07195 SM00862 Transcriptional regulatory protein, C terminal SHYC_RS07200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SHYC_RS07200 SM00387 Histidine kinase-like ATPases SHYC_RS07200 SM00388 His Kinase A (phosphoacceptor) domain SHYC_RS07205 SM00861 Transketolase, pyrimidine binding domain SHYC_RS07225 SM00382 ATPases associated with a variety of cellular activities SHYC_RS07230 SM00327 von Willebrand factor (vWF) type A domain SHYC_RS07260 SM00357 Cold shock protein domain SHYC_RS07275 SM01005 Alanine racemase, C-terminal domain SHYC_RS07295 SM01130 SHYC_RS07295 SHYC_RS07300 SM00859 Semialdehyde dehydrogenase, NAD binding domain SHYC_RS07305 SM00382 ATPases associated with a variety of cellular activities SHYC_RS07390 SM01061 CAT RNA binding domain SHYC_RS07400 SM00434 DNA Topoisomerase IV SHYC_RS07405 SM00387 Histidine kinase-like ATPases SHYC_RS07405 SM00433 TopoisomeraseII SHYC_RS07410 SM01207 SHYC_RS07410 SHYC_RS07460 SM00861 Transketolase, pyrimidine binding domain SHYC_RS07490 SM01240 SHYC_RS07490 SHYC_RS07505 SM01060 SHYC_RS07505 SHYC_RS07560 SM00318 Staphylococcal nuclease homologues SHYC_RS07570 SM00421 helix_turn_helix, Lux Regulon SHYC_RS07570 SM00448 cheY-homologous receiver domain SHYC_RS07585 SM00382 ATPases associated with a variety of cellular activities SHYC_RS07610 SM01230 SHYC_RS07610 SHYC_RS07615 SM00422 helix_turn_helix, mercury resistance SHYC_RS07675 SM00853 MutL C terminal dimerisation domain SHYC_RS07675 SM01340 SHYC_RS07675 SHYC_RS07680 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SHYC_RS07680 SM00534 ATPase domain of DNA mismatch repair MUTS family SHYC_RS07695 SM00729 Elongator protein 3, MiaB family, Radical SAM SHYC_RS07725 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SHYC_RS07735 SM00322 K homology RNA-binding domain SHYC_RS07735 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SHYC_RS07740 SM00382 ATPases associated with a variety of cellular activities SHYC_RS07745 SM00852 Probable molybdopterin binding domain SHYC_RS07755 SM00530 Helix-turn-helix XRE-family like proteins SHYC_RS07780 SM00345 helix_turn_helix gluconate operon transcriptional repressor SHYC_RS07780 SM00866 SHYC_RS07780 SHYC_RS07785 SM00382 ATPases associated with a variety of cellular activities SHYC_RS07785 SM00843 SHYC_RS07785 SHYC_RS07790 SM00849 Metallo-beta-lactamase superfamily SHYC_RS07800 SM00316 Ribosomal protein S1-like RNA-binding domain SHYC_RS07800 SM00322 K homology RNA-binding domain SHYC_RS07805 SM01387 SHYC_RS07805 SHYC_RS07810 SM00904 Riboflavin kinase SHYC_RS07845 SM00316 Ribosomal protein S1-like RNA-binding domain SHYC_RS07845 SM00322 K homology RNA-binding domain SHYC_RS07855 SM00479 SHYC_RS07855 SHYC_RS07855 SM00481 DNA polymerase alpha chain like domain SHYC_RS07865 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SHYC_RS07910 SM00382 ATPases associated with a variety of cellular activities SHYC_RS07910 SM01086 C-terminal, D2-small domain, of ClpB protein SHYC_RS07930 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SHYC_RS07930 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SHYC_RS07930 SM00493 SHYC_RS07930 SHYC_RS07940 SM00881 CoA binding domain SHYC_RS07980 SM00014 Acid phosphatase homologues SHYC_RS08005 SM00382 ATPases associated with a variety of cellular activities SHYC_RS08005 SM00962 SRP54-type protein, GTPase domain SHYC_RS08005 SM00963 SRP54-type protein, helical bundle domain SHYC_RS08015 SM00382 ATPases associated with a variety of cellular activities SHYC_RS08015 SM00962 SRP54-type protein, GTPase domain SHYC_RS08015 SM00963 SRP54-type protein, helical bundle domain SHYC_RS08020 SM00968 SMC proteins Flexible Hinge Domain SHYC_RS08025 SM00358 Double-stranded RNA binding motif SHYC_RS08025 SM00535 Ribonuclease III family SHYC_RS08035 SM00822 SHYC_RS08035 SHYC_RS08040 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SHYC_RS08055 SM00487 DEAD-like helicases superfamily SHYC_RS08055 SM00490 helicase superfamily c-terminal domain SHYC_RS08070 SM01120 SHYC_RS08070 SHYC_RS08070 SM01121 SHYC_RS08070 SHYC_RS08085 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SHYC_RS08105 SM00220 Serine/Threonine protein kinases, catalytic domain SHYC_RS08105 SM00740 SHYC_RS08105 SHYC_RS08110 SM00331 Sigma factor PP2C-like phosphatases SHYC_RS08110 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SHYC_RS08140 SM00487 DEAD-like helicases superfamily SHYC_RS08140 SM00490 helicase superfamily c-terminal domain SHYC_RS08150 SM01409 SHYC_RS08150 SHYC_RS08155 SM00072 Guanylate kinase homologues. SHYC_RS08175 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SHYC_RS08190 SM00851 MGS-like domain SHYC_RS08190 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SHYC_RS08190 SM01209 SHYC_RS08190 SHYC_RS08195 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SHYC_RS08220 SM00363 S4 RNA-binding domain SHYC_RS08245 SM00363 S4 RNA-binding domain SHYC_RS08270 SM00864 Tubulin/FtsZ family, GTPase domain SHYC_RS08270 SM00865 Tubulin/FtsZ family, C-terminal domain SHYC_RS08275 SM00842 Cell division protein FtsA SHYC_RS08295 SM00740 SHYC_RS08295 SHYC_RS08395 SM00465 GIY-YIG type nucleases (URI domain) SHYC_RS08405 SM00463 Small MutS-related domain SHYC_RS08405 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SHYC_RS08405 SM00534 ATPase domain of DNA mismatch repair MUTS family SHYC_RS08410 SM00481 DNA polymerase alpha chain like domain SHYC_RS08410 SM00483 DNA polymerase X family SHYC_RS08430 SM00873 B3/4 domain SHYC_RS08430 SM00874 tRNA synthetase B5 domain SHYC_RS08430 SM00896 Ferredoxin-fold anticodon binding domain SHYC_RS08440 SM00967 RNA 2'-O ribose methyltransferase substrate binding SHYC_RS08510 SM00878 Biotin carboxylase C-terminal domain SHYC_RS08540 SM00838 Elongation factor G C-terminus SHYC_RS08585 SM00382 ATPases associated with a variety of cellular activities SHYC_RS08590 SM00530 Helix-turn-helix XRE-family like proteins SHYC_RS08610 SM00861 Transketolase, pyrimidine binding domain SHYC_RS08640 SM00849 Metallo-beta-lactamase superfamily SHYC_RS08700 SM00382 ATPases associated with a variety of cellular activities SHYC_RS08710 SM01209 SHYC_RS08710 SHYC_RS08710 SM01210 SHYC_RS08710 SHYC_RS08715 SM00798 AICARFT/IMPCHase bienzyme SHYC_RS08715 SM00851 MGS-like domain SHYC_RS08740 SM01211 SHYC_RS08740 SHYC_RS08760 SM01001 AIR carboxylase SHYC_RS08805 SM00382 ATPases associated with a variety of cellular activities SHYC_RS08850 SM00984 UDP binding domain SHYC_RS08875 SM00047 Lysozyme subfamily 2 SHYC_RS08875 SM00644 SHYC_RS08875 SHYC_RS08920 SM00382 ATPases associated with a variety of cellular activities SHYC_RS08955 SM00914 SHYC_RS08955 SHYC_RS08990 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SHYC_RS09060 SM00116 Domain in cystathionine beta-synthase and other proteins. SHYC_RS09060 SM00924 MgtE intracellular N domain SHYC_RS09075 SM00954 Region found in RelA / SpoT proteins SHYC_RS09085 SM01118 SHYC_RS09085 SHYC_RS09130 SM00382 ATPases associated with a variety of cellular activities SHYC_RS09135 SM00382 ATPases associated with a variety of cellular activities SHYC_RS09155 SM00825 Beta-ketoacyl synthase SHYC_RS09170 SM00382 ATPases associated with a variety of cellular activities SHYC_RS09170 SM01086 C-terminal, D2-small domain, of ClpB protein SHYC_RS09240 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SHYC_RS09255 SM00316 Ribosomal protein S1-like RNA-binding domain SHYC_RS09270 SM01298 SHYC_RS09270 SHYC_RS09405 SM00729 Elongator protein 3, MiaB family, Radical SAM SHYC_RS09450 SM00382 ATPases associated with a variety of cellular activities SHYC_RS09470 SM00382 ATPases associated with a variety of cellular activities SHYC_RS09470 SM00930 SHYC_RS09470 SHYC_RS09480 SM00493 SHYC_RS09480 SHYC_RS09535 SM00316 Ribosomal protein S1-like RNA-binding domain SHYC_RS09535 SM00357 Cold shock protein domain SHYC_RS09535 SM00955 SHYC_RS09535 SHYC_RS09555 SM01192 SHYC_RS09555 SHYC_RS09555 SM01193 SHYC_RS09555 SHYC_RS09575 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SHYC_RS09620 SM00357 Cold shock protein domain SHYC_RS09660 SM00028 Tetratricopeptide repeats SHYC_RS09690 SM00487 DEAD-like helicases superfamily SHYC_RS09690 SM00490 helicase superfamily c-terminal domain SHYC_RS09710 SM00937 SHYC_RS09710 SHYC_RS09715 SM00957 SecA DEAD-like domain SHYC_RS09715 SM00958 SecA preprotein cross-linking domain SHYC_RS09730 SM00487 DEAD-like helicases superfamily SHYC_RS09730 SM00490 helicase superfamily c-terminal domain SHYC_RS09760 SM00267 diguanylate cyclase SHYC_RS09840 SM00046 Diacylglycerol kinase catalytic domain (presumed) SHYC_RS09860 SM00382 ATPases associated with a variety of cellular activities SHYC_RS09865 SM00341 Helicase and RNase D C-terminal SHYC_RS09865 SM00487 DEAD-like helicases superfamily SHYC_RS09865 SM00490 helicase superfamily c-terminal domain SHYC_RS09865 SM00956 SHYC_RS09865 SHYC_RS09870 SM00382 ATPases associated with a variety of cellular activities SHYC_RS09885 SM00797 Allophanate hydrolase subunit 2 SHYC_RS09890 SM00796 Allophanate hydrolase subunit 1 SHYC_RS09945 SM01091 Transporter associated domain SHYC_RS09960 SM00420 helix_turn_helix, Deoxyribose operon repressor SHYC_RS09960 SM01134 SHYC_RS09960 SHYC_RS10010 SM00833 Cobalamin synthesis protein cobW C-terminal domain SHYC_RS10015 SM00347 helix_turn_helix multiple antibiotic resistance protein SHYC_RS10020 SM00382 ATPases associated with a variety of cellular activities SHYC_RS10025 SM00382 ATPases associated with a variety of cellular activities SHYC_RS10135 SM00257 Lysin motif SHYC_RS10205 SM00382 ATPases associated with a variety of cellular activities SHYC_RS10220 SM00899 SHYC_RS10220 SHYC_RS10235 SM00382 ATPases associated with a variety of cellular activities SHYC_RS10260 SM00382 ATPases associated with a variety of cellular activities SHYC_RS10275 SM00529 Helix-turn-helix diphteria tox regulatory element SHYC_RS10275 SM00899 SHYC_RS10275 SHYC_RS10280 SM00382 ATPases associated with a variety of cellular activities SHYC_RS10390 SM00836 DALR anticodon binding domain SHYC_RS10390 SM01016 Arginyl tRNA synthetase N terminal dom SHYC_RS10405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SHYC_RS10495 SM00986 Uracil DNA glycosylase superfamily SHYC_RS10495 SM00987 UreE urease accessory protein, C-terminal domain SHYC_RS10535 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SHYC_RS10635 SM00838 Elongation factor G C-terminus SHYC_RS10635 SM00889 Elongation factor G, domain IV SHYC_RS10655 SM00663 RNA polymerase I subunit A N-terminus SHYC_RS10685 SM00649 Ribosomal protein L11/L12 SHYC_RS10690 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SHYC_RS10690 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SHYC_RS10710 SM00967 RNA 2'-O ribose methyltransferase substrate binding SHYC_RS10715 SM00535 Ribonuclease III family SHYC_RS10720 SM00840 SHYC_RS10720 SHYC_RS10745 SM00670 Large family of predicted nucleotide-binding domains SHYC_RS10750 SM00382 ATPases associated with a variety of cellular activities SHYC_RS10755 SM00382 ATPases associated with a variety of cellular activities SHYC_RS10755 SM01086 C-terminal, D2-small domain, of ClpB protein SHYC_RS10790 SM00345 helix_turn_helix gluconate operon transcriptional repressor SHYC_RS10895 SM00905 Dihydroneopterin aldolase SHYC_RS10915 SM00382 ATPases associated with a variety of cellular activities SHYC_RS10925 SM00977 TilS substrate C-terminal domain SHYC_RS10930 SM00316 Ribosomal protein S1-like RNA-binding domain SHYC_RS10940 SM00363 S4 RNA-binding domain SHYC_RS10955 SM00487 DEAD-like helicases superfamily SHYC_RS10955 SM00490 helicase superfamily c-terminal domain SHYC_RS10955 SM00982 SHYC_RS10955 SHYC_RS10955 SM01058 CarD-like/TRCF domain SHYC_RS10970 SM01400 SHYC_RS10970 SHYC_RS11005 SM00650 Ribosomal RNA adenine dimethylases SHYC_RS11010 SM00493 SHYC_RS11010 SHYC_RS11030 SM00465 GIY-YIG type nucleases (URI domain) SHYC_RS11090 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SHYC_RS11090 SM00493 SHYC_RS11090 SHYC_RS11100 SM00382 ATPases associated with a variety of cellular activities SHYC_RS11110 SM00345 helix_turn_helix gluconate operon transcriptional repressor SHYC_RS11110 SM00866 SHYC_RS11110 SHYC_RS11115 SM00642 Alpha-amylase domain SHYC_RS11155 SM00382 ATPases associated with a variety of cellular activities SHYC_RS11170 SM00257 Lysin motif SHYC_RS11345 SM00382 ATPases associated with a variety of cellular activities SHYC_RS11350 SM00382 ATPases associated with a variety of cellular activities SHYC_RS11405 SM00020 Trypsin-like serine protease SHYC_RS11455 SM00354 helix_turn _helix lactose operon repressor SHYC_RS11460 SM00513 Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation SHYC_RS11495 SM00116 Domain in cystathionine beta-synthase and other proteins. SHYC_RS11495 SM01240 SHYC_RS11495 SHYC_RS11565 SM00729 Elongator protein 3, MiaB family, Radical SAM SHYC_RS11565 SM00876 Biotin and Thiamin Synthesis associated domain SHYC_RS11625 SM00470 ParB-like nuclease domain SHYC_RS11690 SM00988 UreE urease accessory protein, N-terminal domain SHYC_RS11695 SM00867 YceI-like domain SHYC_RS11720 SM00347 helix_turn_helix multiple antibiotic resistance protein SHYC_RS11730 SM00903 Flavin reductase like domain SHYC_RS11740 SM00470 ParB-like nuclease domain SHYC_RS11750 SM01228 SHYC_RS11750 SHYC_RS11830 SM00635 Bacterial Ig-like domain 2 SHYC_RS11840 SM00481 DNA polymerase alpha chain like domain