SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 ProSitePatterns PS01233 Urocanase signature. 435 450 - T 23-04-2016 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 TIGRFAM TIGR01228 hutU: urocanate hydratase 3 547 1.5E-300 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 PIRSF PIRSF001423 1 554 1.7E-295 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 PANTHER PTHR12216 3 548 0.0 T 23-04-2016 SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 PANTHER PTHR12216:SF3 3 548 0.0 T 23-04-2016 SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 Pfam PF01175 Urocanase 5 540 3.9E-262 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 Gene3D G3DSA:3.40.50.10730 135 342 1.4E-91 T 23-04-2016 SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 SUPERFAMILY SSF111326 2 548 2.75E-256 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 Hamap MF_00577 Urocanate hydratase [hutU]. 1 549 50.162 T 23-04-2016 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 Gene3D G3DSA:3.40.1770.10 353 548 1.4E-152 T 23-04-2016 SHYC_RS02695 c8c4c4e76a217aeffc144b0a19c88d16 555 Gene3D G3DSA:3.40.1770.10 2 134 1.4E-152 T 23-04-2016 SHYC_RS08975 e2aa59edf20f8227d47800061db6d588 826 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 792 824 3.0E-6 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain SHYC_RS08975 e2aa59edf20f8227d47800061db6d588 826 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 275 424 3.9E-31 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS08975 e2aa59edf20f8227d47800061db6d588 826 SUPERFAMILY SSF49401 126 269 1.37E-30 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS08975 e2aa59edf20f8227d47800061db6d588 826 Pfam PF04650 YSIRK type signal peptide 2 25 5.6E-10 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS08975 e2aa59edf20f8227d47800061db6d588 826 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 2 39 8.4E-9 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS08975 e2aa59edf20f8227d47800061db6d588 826 Gene3D G3DSA:2.60.40.1290 288 446 4.5E-40 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS08975 e2aa59edf20f8227d47800061db6d588 826 SUPERFAMILY SSF49401 273 445 2.55E-38 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS08975 e2aa59edf20f8227d47800061db6d588 826 Gene3D G3DSA:2.60.40.1280 126 287 2.6E-36 T 23-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 SHYC_RS04410 15ffc1f773ebfe3a4cc2a5f906303bb9 526 PANTHER PTHR11938 181 507 3.0E-68 T 23-04-2016 SHYC_RS04410 15ffc1f773ebfe3a4cc2a5f906303bb9 526 SUPERFAMILY SSF51395 165 521 2.5E-108 T 23-04-2016 SHYC_RS04410 15ffc1f773ebfe3a4cc2a5f906303bb9 526 SUPERFAMILY SSF51395 6 128 2.5E-108 T 23-04-2016 SHYC_RS04410 15ffc1f773ebfe3a4cc2a5f906303bb9 526 Pfam PF01645 Conserved region in glutamate synthase 167 493 5.1E-99 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SHYC_RS04410 15ffc1f773ebfe3a4cc2a5f906303bb9 526 PIRSF PIRSF006429 1 525 4.5E-150 T 23-04-2016 IPR024188 Glutamate synthase large subunit-like protein SHYC_RS04410 15ffc1f773ebfe3a4cc2a5f906303bb9 526 PANTHER PTHR11938:SF50 181 507 3.0E-68 T 23-04-2016 SHYC_RS04410 15ffc1f773ebfe3a4cc2a5f906303bb9 526 Gene3D G3DSA:3.20.20.70 156 512 1.3E-114 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS04410 15ffc1f773ebfe3a4cc2a5f906303bb9 526 Gene3D G3DSA:3.20.20.70 35 100 1.3E-114 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS04410 15ffc1f773ebfe3a4cc2a5f906303bb9 526 PIRSF PIRSF500060 1 526 5.7E-208 T 23-04-2016 IPR027283 Glutamate synthase large subunit-like protein, bacteria SHYC_RS00635 569fbec31ee553b9e4dad84965bab078 332 SUPERFAMILY SSF81345 4 327 4.97E-70 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS00635 569fbec31ee553b9e4dad84965bab078 332 PANTHER PTHR30472 1 332 1.9E-134 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS00635 569fbec31ee553b9e4dad84965bab078 332 Gene3D G3DSA:1.10.3470.10 7 330 1.1E-84 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS00635 569fbec31ee553b9e4dad84965bab078 332 Pfam PF01032 FecCD transport family 19 327 8.2E-82 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS00635 569fbec31ee553b9e4dad84965bab078 332 PANTHER PTHR30472:SF22 1 332 1.9E-134 T 23-04-2016 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 Pfam PF03952 Enolase, N-terminal domain 4 136 1.1E-60 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 Pfam PF00113 Enolase, C-terminal TIM barrel domain 142 429 4.5E-131 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 SMART SM01192 141 431 1.3E-219 T 23-04-2016 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 Hamap MF_00318 Enolase [eno]. 2 417 44.681 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 Gene3D G3DSA:3.20.20.120 131 431 4.9E-138 T 23-04-2016 IPR029065 Enolase C-terminal domain-like SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 431 1.4E-209 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 ProSitePatterns PS00164 Enolase signature. 340 353 - T 23-04-2016 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 PANTHER PTHR11902 1 431 7.9E-266 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 SUPERFAMILY SSF51604 140 432 2.4E-130 T 23-04-2016 IPR029065 Enolase C-terminal domain-like SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 SUPERFAMILY SSF54826 4 139 1.84E-57 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 Gene3D G3DSA:3.30.390.10 4 126 1.8E-57 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 PRINTS PR00148 Enolase signature 317 328 8.4E-48 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 PRINTS PR00148 Enolase signature 109 125 8.4E-48 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 PRINTS PR00148 Enolase signature 37 51 8.4E-48 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 PRINTS PR00148 Enolase signature 369 386 8.4E-48 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 PRINTS PR00148 Enolase signature 163 176 8.4E-48 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 PRINTS PR00148 Enolase signature 340 354 8.4E-48 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 PIRSF PIRSF001400 1 431 1.9E-188 T 23-04-2016 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09555 9385e39694d6f8fdb51492395dcbe489 434 SMART SM01193 4 136 3.7E-95 T 23-04-2016 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 SUPERFAMILY SSF51735 2 144 2.82E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 PIRSF PIRSF006205 1 376 4.0E-154 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 PANTHER PTHR30525 1 367 5.8E-202 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 Gene3D G3DSA:3.40.50.720 1 144 4.4E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 Gene3D G3DSA:1.10.1740.10 297 370 8.1E-27 T 23-04-2016 SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 SUPERFAMILY SSF69055 286 371 1.83E-27 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 140 223 9.1E-42 T 23-04-2016 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 SUPERFAMILY SSF55347 121 258 1.83E-59 T 23-04-2016 SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 371 2.5E-155 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 126 2.4E-37 T 23-04-2016 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 376 45.089 T 23-04-2016 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS07870 6d4c17579a62e92cff3e6727739179a9 376 Pfam PF13288 DXP reductoisomerase C-terminal domain 255 370 3.4E-40 T 23-04-2016 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS01395 f820a1a8202f1f88edfed094fe4e46d5 601 Gene3D G3DSA:3.40.50.1110 444 593 5.6E-11 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain SHYC_RS01395 f820a1a8202f1f88edfed094fe4e46d5 601 Pfam PF01757 Acyltransferase family 19 345 7.4E-26 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SHYC_RS01395 f820a1a8202f1f88edfed094fe4e46d5 601 PANTHER PTHR23028 2 539 3.4E-137 T 23-04-2016 SHYC_RS01395 f820a1a8202f1f88edfed094fe4e46d5 601 SUPERFAMILY SSF52266 434 590 9.83E-17 T 23-04-2016 IPR013830 SGNH hydrolase-type esterase domain SHYC_RS01395 f820a1a8202f1f88edfed094fe4e46d5 601 PANTHER PTHR23028:SF53 2 539 3.4E-137 T 23-04-2016 SHYC_RS04235 fadbde31e1a3434e06bdba57a9d6ff8e 310 SMART SM00046 4 132 2.7E-8 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SHYC_RS04235 fadbde31e1a3434e06bdba57a9d6ff8e 310 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 128 1.9E-34 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SHYC_RS04235 fadbde31e1a3434e06bdba57a9d6ff8e 310 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 3 291 1.6E-91 T 23-04-2016 IPR005218 Diacylglycerol/lipid kinase SHYC_RS04235 fadbde31e1a3434e06bdba57a9d6ff8e 310 Gene3D G3DSA:3.40.50.10330 35 119 9.3E-6 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHYC_RS04235 fadbde31e1a3434e06bdba57a9d6ff8e 310 PANTHER PTHR12358:SF41 1 305 4.7E-172 T 23-04-2016 SHYC_RS04235 fadbde31e1a3434e06bdba57a9d6ff8e 310 PANTHER PTHR12358 1 305 4.7E-172 T 23-04-2016 SHYC_RS04235 fadbde31e1a3434e06bdba57a9d6ff8e 310 SUPERFAMILY SSF111331 2 294 1.05E-79 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SHYC_RS01935 60b2f77af1377a2293382a9888f77998 342 Gene3D G3DSA:3.40.50.1980 59 185 4.5E-22 T 23-04-2016 SHYC_RS01935 60b2f77af1377a2293382a9888f77998 342 PANTHER PTHR30532 60 338 2.1E-115 T 23-04-2016 SHYC_RS01935 60b2f77af1377a2293382a9888f77998 342 PANTHER PTHR30532 1 43 2.1E-115 T 23-04-2016 SHYC_RS01935 60b2f77af1377a2293382a9888f77998 342 Pfam PF01497 Periplasmic binding protein 72 315 2.4E-34 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHYC_RS01935 60b2f77af1377a2293382a9888f77998 342 SUPERFAMILY SSF53807 58 330 7.06E-60 T 23-04-2016 SHYC_RS01935 60b2f77af1377a2293382a9888f77998 342 PANTHER PTHR30532:SF4 60 338 2.1E-115 T 23-04-2016 SHYC_RS01935 60b2f77af1377a2293382a9888f77998 342 PANTHER PTHR30532:SF4 1 43 2.1E-115 T 23-04-2016 SHYC_RS01935 60b2f77af1377a2293382a9888f77998 342 Gene3D G3DSA:3.40.50.1980 187 338 1.1E-37 T 23-04-2016 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 241 253 - T 23-04-2016 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 SMART SM01004 1 322 4.2E-223 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 PIRSF PIRSF001415 1 325 1.9E-148 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 119 133 3.0E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 3.0E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 241 257 3.0E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 3.0E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 281 3.0E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 296 315 3.0E-58 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 PANTHER PTHR11458 3 318 2.9E-181 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 Gene3D G3DSA:3.20.20.70 3 323 6.5E-146 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 SUPERFAMILY SSF51569 3 323 8.35E-138 T 23-04-2016 SHYC_RS06080 7e6c3e800b0009622b4c07ecfebfbf19 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 4 318 1.2E-145 T 23-04-2016 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS02560 844c9fb7ee67a3e41ffecd0baf929ad9 225 SUPERFAMILY SSF52540 3 222 2.59E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02560 844c9fb7ee67a3e41ffecd0baf929ad9 225 Gene3D G3DSA:3.40.50.300 3 223 1.9E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02560 844c9fb7ee67a3e41ffecd0baf929ad9 225 SMART SM00382 31 219 2.9E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS02560 844c9fb7ee67a3e41ffecd0baf929ad9 225 PANTHER PTHR24220:SF431 4 221 5.3E-108 T 23-04-2016 SHYC_RS02560 844c9fb7ee67a3e41ffecd0baf929ad9 225 PANTHER PTHR24220 4 221 5.3E-108 T 23-04-2016 SHYC_RS02560 844c9fb7ee67a3e41ffecd0baf929ad9 225 Pfam PF00005 ABC transporter 22 171 1.7E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS10695 ea3c37ee53aed1fb6633fc8ecf37e916 59 PANTHER PTHR33910 1 58 1.2E-16 T 23-04-2016 SHYC_RS10695 ea3c37ee53aed1fb6633fc8ecf37e916 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 58 12.053 T 23-04-2016 IPR022943 Preprotein translocase subunit SecE SHYC_RS10695 ea3c37ee53aed1fb6633fc8ecf37e916 59 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SHYC_RS10695 ea3c37ee53aed1fb6633fc8ecf37e916 59 PANTHER PTHR33910:SF1 1 58 1.2E-16 T 23-04-2016 SHYC_RS10695 ea3c37ee53aed1fb6633fc8ecf37e916 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 6 58 4.2E-20 T 23-04-2016 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 SHYC_RS10695 ea3c37ee53aed1fb6633fc8ecf37e916 59 Gene3D G3DSA:1.20.5.1030 2 58 4.1E-20 T 23-04-2016 SHYC_RS10695 ea3c37ee53aed1fb6633fc8ecf37e916 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 58 6.3E-18 T 23-04-2016 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 PANTHER PTHR22642:SF7 33 300 2.6E-221 T 23-04-2016 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 PANTHER PTHR22642:SF7 324 505 2.6E-221 T 23-04-2016 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 Gene3D G3DSA:2.30.40.10 71 140 3.4E-13 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 Hamap MF_01953 Urease subunit alpha [ureC]. 3 571 55.273 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 Pfam PF01979 Amidohydrolase family 129 457 5.3E-76 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 SUPERFAMILY SSF51338 4 133 7.96E-54 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 SUPERFAMILY SSF51338 426 478 7.96E-54 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 4 571 0.0 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 405 420 2.2E-32 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 299 316 2.2E-32 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 431 444 2.2E-32 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 338 354 2.2E-32 T 23-04-2016 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 Pfam PF00449 Urease alpha-subunit, N-terminal domain 4 123 2.4E-51 T 23-04-2016 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 SUPERFAMILY SSF51556 485 571 1.84E-186 T 23-04-2016 IPR032466 Metal-dependent hydrolase SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 SUPERFAMILY SSF51556 133 436 1.84E-186 T 23-04-2016 IPR032466 Metal-dependent hydrolase SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 ProSitePatterns PS01120 Urease nickel ligands signature. 131 144 - T 23-04-2016 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 ProSitePatterns PS00145 Urease active site. 321 337 - T 23-04-2016 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 PANTHER PTHR22642 33 300 2.6E-221 T 23-04-2016 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 PANTHER PTHR22642 324 505 2.6E-221 T 23-04-2016 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 Gene3D G3DSA:3.20.20.140 141 433 6.7E-194 T 23-04-2016 SHYC_RS01865 d9ea3fe9755a18ef14c6adb7f19a054c 571 Gene3D G3DSA:3.20.20.140 492 569 6.7E-194 T 23-04-2016 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 Pfam PF13328 HD domain 33 180 6.4E-45 T 23-04-2016 IPR003607 HD/PDEase domain SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 Gene3D G3DSA:3.30.70.260 651 724 5.6E-6 T 23-04-2016 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 SUPERFAMILY SSF109604 10 195 4.39E-72 T 23-04-2016 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 SMART SM00954 240 350 1.5E-69 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 PANTHER PTHR21262 9 729 0.0 T 23-04-2016 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 SUPERFAMILY SSF55021 651 728 1.74E-5 T 23-04-2016 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 2.7E-40 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 Gene3D G3DSA:3.10.20.30 395 457 2.0E-19 T 23-04-2016 IPR012675 Beta-grasp domain SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 Pfam PF13291 ACT domain 650 726 1.6E-16 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 32 726 1.5E-240 T 23-04-2016 IPR004811 RelA/SpoT family GO:0015969 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 SUPERFAMILY SSF81271 382 454 2.62E-22 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 SMART SM00471 46 158 4.9E-7 T 23-04-2016 IPR003607 HD/PDEase domain SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 Gene3D G3DSA:3.30.460.10 199 329 1.0E-48 T 23-04-2016 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 Pfam PF02824 TGS domain 395 454 1.5E-20 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 SUPERFAMILY SSF81301 199 371 2.29E-63 T 23-04-2016 SHYC_RS06200 2df4858934c01d7d8a6c382b56614211 729 PANTHER PTHR21262:SF0 9 729 0.0 T 23-04-2016 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 Pfam PF01084 Ribosomal protein S18 23 73 1.3E-29 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 Gene3D G3DSA:4.10.640.10 13 79 7.5E-37 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 TIGRFAM TIGR00165 S18: ribosomal protein bS18 11 78 7.2E-39 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 23-04-2016 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 78 1.0E-23 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 PANTHER PTHR13479 10 76 7.6E-34 T 23-04-2016 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 78 23.54 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 2.2E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 2.2E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 2.2E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 2.2E-22 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11590 6f972cd2926ddaf71775febc55a863b5 80 SUPERFAMILY SSF46911 5 78 4.97E-32 T 23-04-2016 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS05890 c68cd0d244e5a39b399902e8f9811e7a 166 PANTHER PTHR31964:SF45 1 163 4.2E-42 T 23-04-2016 SHYC_RS05890 c68cd0d244e5a39b399902e8f9811e7a 166 Pfam PF00582 Universal stress protein family 3 143 1.5E-34 T 23-04-2016 IPR006016 UspA GO:0006950 SHYC_RS05890 c68cd0d244e5a39b399902e8f9811e7a 166 SUPERFAMILY SSF52402 3 143 2.93E-35 T 23-04-2016 SHYC_RS05890 c68cd0d244e5a39b399902e8f9811e7a 166 PIRSF PIRSF006276 1 146 1.9E-22 T 23-04-2016 IPR006015 Universal stress protein A SHYC_RS05890 c68cd0d244e5a39b399902e8f9811e7a 166 PANTHER PTHR31964 1 163 4.2E-42 T 23-04-2016 SHYC_RS05890 c68cd0d244e5a39b399902e8f9811e7a 166 Gene3D G3DSA:3.40.50.620 4 143 6.5E-44 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS05890 c68cd0d244e5a39b399902e8f9811e7a 166 PRINTS PR01438 Universal stress protein signature 121 143 2.9E-18 T 23-04-2016 IPR006015 Universal stress protein A SHYC_RS05890 c68cd0d244e5a39b399902e8f9811e7a 166 PRINTS PR01438 Universal stress protein signature 4 22 2.9E-18 T 23-04-2016 IPR006015 Universal stress protein A SHYC_RS05890 c68cd0d244e5a39b399902e8f9811e7a 166 PRINTS PR01438 Universal stress protein signature 103 115 2.9E-18 T 23-04-2016 IPR006015 Universal stress protein A SHYC_RS02530 252e6e77c50ea2eb03dbe745211fd288 533 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 530 6.0E-152 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SHYC_RS02530 252e6e77c50ea2eb03dbe745211fd288 533 PANTHER PTHR30003 1 529 5.2E-298 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SHYC_RS02530 252e6e77c50ea2eb03dbe745211fd288 533 PANTHER PTHR30003:SF5 1 529 5.2E-298 T 23-04-2016 SHYC_RS02530 252e6e77c50ea2eb03dbe745211fd288 533 Pfam PF02652 L-lactate permease 14 527 3.3E-151 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 SUPERFAMILY SSF51905 1 314 8.88E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 184 1.3E-56 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 1.3E-56 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 429 1.3E-56 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 285 292 1.3E-56 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 322 343 1.3E-56 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 243 257 1.3E-56 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 122 131 1.3E-56 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 387 402 1.3E-56 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.3E-56 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PANTHER PTHR22912:SF145 1 437 8.0E-196 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PANTHER PTHR22912 1 437 8.0E-196 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PIRSF PIRSF000350 1 435 1.7E-90 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 8.3E-29 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 8.3E-29 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 8.3E-29 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 119 137 8.3E-29 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 8.3E-29 T 23-04-2016 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 326 432 1.1E-25 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 300 1.5E-61 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 Gene3D G3DSA:3.50.50.60 129 312 1.1E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 Gene3D G3DSA:3.50.50.60 2 128 1.3E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 SUPERFAMILY SSF55424 326 435 4.3E-31 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SHYC_RS01140 19c541a6671ffe1b95c7ed0e80452373 437 Gene3D G3DSA:3.30.390.30 313 435 2.0E-34 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 PANTHER PTHR14025 404 1109 0.0 T 23-04-2016 SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 SUPERFAMILY SSF143517 1012 1158 1.19E-27 T 23-04-2016 SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 SUPERFAMILY SSF141259 489 566 3.4E-25 T 23-04-2016 IPR003711 CarD-like/TRCF domain SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 SMART SM00982 1022 1122 4.0E-31 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 Gene3D G3DSA:3.30.2060.10 140 215 3.7E-11 T 23-04-2016 SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 Pfam PF00271 Helicase conserved C-terminal domain 823 927 4.1E-16 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 36 1126 28.889 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 SUPERFAMILY SSF52540 374 484 3.24E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 156 1096 0.0 T 23-04-2016 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 SUPERFAMILY SSF52540 800 1006 9.2E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 Gene3D G3DSA:3.40.50.300 605 804 4.3E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 Pfam PF02559 CarD-like/TRCF domain 498 593 4.7E-30 T 23-04-2016 IPR003711 CarD-like/TRCF domain SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 Pfam PF00270 DEAD/DEAH box helicase 623 782 1.5E-17 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 SMART SM00487 618 808 9.5E-34 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 SMART SM00490 841 928 4.4E-18 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 Pfam PF03461 TRCF domain 1023 1114 9.1E-23 T 23-04-2016 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 SMART SM01058 497 594 5.3E-48 T 23-04-2016 IPR003711 CarD-like/TRCF domain SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 PANTHER PTHR14025:SF21 404 1109 0.0 T 23-04-2016 SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 Gene3D G3DSA:3.40.50.300 820 974 1.6E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 SUPERFAMILY SSF52540 542 801 8.21E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10955 48a2e93e7b4b4adb0c1ee86beb376ae9 1170 SUPERFAMILY SSF52540 24 366 2.3E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06595 7022118e1149f318b004cddfb34a271a 321 PANTHER PTHR30570:SF1 41 315 5.7E-79 T 23-04-2016 SHYC_RS06595 7022118e1149f318b004cddfb34a271a 321 PANTHER PTHR30570 41 315 5.7E-79 T 23-04-2016 SHYC_RS06595 7022118e1149f318b004cddfb34a271a 321 Gene3D G3DSA:3.40.190.10 43 182 3.9E-40 T 23-04-2016 SHYC_RS06595 7022118e1149f318b004cddfb34a271a 321 SUPERFAMILY SSF53850 40 315 9.15E-70 T 23-04-2016 SHYC_RS06595 7022118e1149f318b004cddfb34a271a 321 Pfam PF12849 PBP superfamily domain 38 285 1.9E-43 T 23-04-2016 IPR024370 PBP domain SHYC_RS06595 7022118e1149f318b004cddfb34a271a 321 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 299 5.9E-88 T 23-04-2016 IPR011862 Phosphate binding protein GO:0006810 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 454 5.5E-208 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 SUPERFAMILY SSF53732 1 454 5.36E-160 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 Gene3D G3DSA:3.30.499.10 2 163 9.3E-23 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 Pfam PF00330 Aconitase family (aconitate hydratase) 7 446 1.0E-142 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PANTHER PTHR11670:SF12 1 454 1.7E-229 T 23-04-2016 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PRINTS PR00415 Aconitase family signature 282 296 2.0E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PRINTS PR00415 Aconitase family signature 208 221 2.0E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PRINTS PR00415 Aconitase family signature 332 343 2.0E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PRINTS PR00415 Aconitase family signature 118 131 2.0E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PRINTS PR00415 Aconitase family signature 132 147 2.0E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PRINTS PR00415 Aconitase family signature 81 94 2.0E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PRINTS PR00415 Aconitase family signature 107 115 2.0E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PRINTS PR00415 Aconitase family signature 388 401 2.0E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PRINTS PR00415 Aconitase family signature 194 207 2.0E-45 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 455 56.62 T 23-04-2016 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 Gene3D G3DSA:3.30.499.10 317 455 4.0E-57 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 ProSitePatterns PS00450 Aconitase family signature 1. 328 344 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 PANTHER PTHR11670 1 454 1.7E-229 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 Gene3D G3DSA:3.40.1060.10 166 277 8.2E-39 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03900 ce20de2835dcce57384ba6a4cc74da16 458 ProSitePatterns PS01244 Aconitase family signature 2. 388 401 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 Pfam PF07687 Peptidase dimerisation domain 256 366 2.0E-4 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 Gene3D G3DSA:3.40.630.10 3 183 5.2E-57 T 23-04-2016 SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 Gene3D G3DSA:3.40.630.10 383 466 5.2E-57 T 23-04-2016 SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 Gene3D G3DSA:3.30.70.360 205 283 4.5E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 Gene3D G3DSA:3.30.70.360 284 377 5.1E-30 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 12 462 3.7E-176 T 23-04-2016 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 KEGG: 00480+3.4.13.- SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 PANTHER PTHR11014 259 468 3.9E-50 T 23-04-2016 SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 PANTHER PTHR11014 8 187 3.9E-50 T 23-04-2016 SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 SUPERFAMILY SSF55031 183 379 5.0E-47 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 SUPERFAMILY SSF53187 3 183 1.26E-58 T 23-04-2016 SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 SUPERFAMILY SSF53187 384 466 1.26E-58 T 23-04-2016 SHYC_RS05685 623a63e0723ec954a145ae2d5dec3a2c 469 Pfam PF01546 Peptidase family M20/M25/M40 82 463 7.4E-26 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS00205 73bd1f81f6b76eed42a743597134ba50 132 TIGRFAM TIGR02691 arsC_pI258_fam: arsenate reductase (thioredoxin) 6 128 1.1E-61 T 23-04-2016 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 SHYC_RS00205 73bd1f81f6b76eed42a743597134ba50 132 SUPERFAMILY SSF52788 4 128 2.09E-44 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHYC_RS00205 73bd1f81f6b76eed42a743597134ba50 132 PANTHER PTHR11717 2 128 1.3E-45 T 23-04-2016 SHYC_RS00205 73bd1f81f6b76eed42a743597134ba50 132 Hamap MF_01624 Protein ArsC [arsC]. 1 131 44.194 T 23-04-2016 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 SHYC_RS00205 73bd1f81f6b76eed42a743597134ba50 132 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 6 128 7.2E-24 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHYC_RS00205 73bd1f81f6b76eed42a743597134ba50 132 SMART SM00226 4 131 4.0E-53 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHYC_RS00205 73bd1f81f6b76eed42a743597134ba50 132 Gene3D G3DSA:3.40.50.270 2 128 2.8E-49 T 23-04-2016 SHYC_RS00205 73bd1f81f6b76eed42a743597134ba50 132 PANTHER PTHR11717:SF18 2 128 1.3E-45 T 23-04-2016 SHYC_RS04650 07d01ee57c8f0722874a7fdd9c488e6e 1182 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 28 65 1.8E-5 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS04650 07d01ee57c8f0722874a7fdd9c488e6e 1182 SUPERFAMILY SSF49401 243 383 2.49E-32 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS04650 07d01ee57c8f0722874a7fdd9c488e6e 1182 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1147 1179 9.8E-5 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain SHYC_RS04650 07d01ee57c8f0722874a7fdd9c488e6e 1182 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 391 535 5.7E-30 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS04650 07d01ee57c8f0722874a7fdd9c488e6e 1182 Gene3D G3DSA:2.60.40.1290 390 552 1.3E-37 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS04650 07d01ee57c8f0722874a7fdd9c488e6e 1182 Gene3D G3DSA:2.60.40.1280 244 383 1.2E-40 T 23-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 SHYC_RS04650 07d01ee57c8f0722874a7fdd9c488e6e 1182 Pfam PF00746 Gram positive anchor 1140 1176 2.4E-5 T 23-04-2016 IPR019948 Gram-positive anchor SHYC_RS04650 07d01ee57c8f0722874a7fdd9c488e6e 1182 Pfam PF04650 YSIRK type signal peptide 31 54 1.7E-6 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS04650 07d01ee57c8f0722874a7fdd9c488e6e 1182 SUPERFAMILY SSF49401 387 554 4.06E-37 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 Pfam PF00270 DEAD/DEAH box helicase 264 417 4.4E-15 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 Gene3D G3DSA:3.40.50.300 440 622 3.9E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 Pfam PF17191 RecG wedge domain 13 171 1.4E-16 T 23-04-2016 IPR033454 RecG, wedge domain SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 SUPERFAMILY SSF50249 11 173 1.42E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 Gene3D G3DSA:3.40.50.300 248 439 6.1E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 SMART SM00490 491 575 5.8E-22 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 PANTHER PTHR24031 126 182 3.5E-118 T 23-04-2016 SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 PANTHER PTHR24031 290 588 3.5E-118 T 23-04-2016 SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 PANTHER PTHR24031 213 273 3.5E-118 T 23-04-2016 SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 PANTHER PTHR24031 611 655 3.5E-118 T 23-04-2016 SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 31 650 2.4E-224 T 23-04-2016 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 Pfam PF00271 Helicase conserved C-terminal domain 454 574 5.0E-22 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 SUPERFAMILY SSF52540 176 438 1.22E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 SUPERFAMILY SSF52540 438 646 4.95E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 Gene3D G3DSA:2.40.50.140 51 126 1.3E-10 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 PANTHER PTHR24031:SF249 126 182 3.5E-118 T 23-04-2016 SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 PANTHER PTHR24031:SF249 290 588 3.5E-118 T 23-04-2016 SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 PANTHER PTHR24031:SF249 213 273 3.5E-118 T 23-04-2016 SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 PANTHER PTHR24031:SF249 611 655 3.5E-118 T 23-04-2016 SHYC_RS08055 4a16c9968a9f2dda9d9a61de039c8552 681 SMART SM00487 256 445 8.5E-30 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 Gene3D G3DSA:1.10.10.10 2 62 5.1E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 SMART SM00866 90 231 2.3E-13 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 PANTHER PTHR11751:SF347 9 71 7.3E-28 T 23-04-2016 SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 PANTHER PTHR11751:SF347 121 144 7.3E-28 T 23-04-2016 SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 5 238 5.8E-67 T 23-04-2016 IPR012770 Trehalose operon transcriptional repressor SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 SMART SM00345 9 68 5.0E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.1E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.1E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 SUPERFAMILY SSF64288 75 235 4.24E-28 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 Pfam PF07702 UTRA domain 92 231 5.2E-19 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 SUPERFAMILY SSF46785 3 83 1.02E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 68 4.7E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 Gene3D G3DSA:3.40.1410.10 63 240 9.3E-37 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 PANTHER PTHR11751 9 71 7.3E-28 T 23-04-2016 SHYC_RS11110 c0d4ae4d18570b8fc5cc0cef3f81974b 241 PANTHER PTHR11751 121 144 7.3E-28 T 23-04-2016 SHYC_RS08350 c4d10cf9ba3aa286985f438bc561e2c9 412 PANTHER PTHR36174:SF2 1 412 6.2E-144 T 23-04-2016 SHYC_RS08350 c4d10cf9ba3aa286985f438bc561e2c9 412 Gene3D G3DSA:3.40.630.30 2 165 1.1E-43 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08350 c4d10cf9ba3aa286985f438bc561e2c9 412 SUPERFAMILY SSF55729 1 164 3.18E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08350 c4d10cf9ba3aa286985f438bc561e2c9 412 Pfam PF02388 FemAB family 8 411 2.5E-117 T 23-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 SHYC_RS08350 c4d10cf9ba3aa286985f438bc561e2c9 412 SUPERFAMILY SSF55729 169 244 4.77E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08350 c4d10cf9ba3aa286985f438bc561e2c9 412 SUPERFAMILY SSF55729 308 408 4.77E-34 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08350 c4d10cf9ba3aa286985f438bc561e2c9 412 PANTHER PTHR36174 1 412 6.2E-144 T 23-04-2016 SHYC_RS08350 c4d10cf9ba3aa286985f438bc561e2c9 412 Gene3D G3DSA:3.40.630.30 166 243 2.4E-45 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08350 c4d10cf9ba3aa286985f438bc561e2c9 412 Gene3D G3DSA:3.40.630.30 308 388 2.4E-45 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08175 ca1d59b53c621d6fa81235bcea2a2daf 230 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 55 68 - T 23-04-2016 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08175 ca1d59b53c621d6fa81235bcea2a2daf 230 PANTHER PTHR32119 1 228 3.4E-104 T 23-04-2016 SHYC_RS08175 ca1d59b53c621d6fa81235bcea2a2daf 230 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 6 224 3.1E-50 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08175 ca1d59b53c621d6fa81235bcea2a2daf 230 SMART SM00934 4 224 7.5E-87 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08175 ca1d59b53c621d6fa81235bcea2a2daf 230 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 229 38.884 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08175 ca1d59b53c621d6fa81235bcea2a2daf 230 Gene3D G3DSA:3.20.20.70 4 228 2.3E-82 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS08175 ca1d59b53c621d6fa81235bcea2a2daf 230 PANTHER PTHR32119:SF2 1 228 3.4E-104 T 23-04-2016 SHYC_RS08175 ca1d59b53c621d6fa81235bcea2a2daf 230 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 225 2.9E-63 T 23-04-2016 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08175 ca1d59b53c621d6fa81235bcea2a2daf 230 SUPERFAMILY SSF51366 2 228 4.71E-72 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 SUPERFAMILY SSF69075 325 420 1.27E-12 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 PANTHER PTHR13812 1 434 7.4E-141 T 23-04-2016 SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 420 1.4E-131 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.9E-40 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 PANTHER PTHR13812:SF18 1 434 7.4E-141 T 23-04-2016 SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 Gene3D G3DSA:3.40.50.720 163 311 9.5E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 23-04-2016 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 SUPERFAMILY SSF51735 163 315 2.54E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 420 26.684 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 SUPERFAMILY SSF69742 1 158 4.71E-42 T 23-04-2016 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 PIRSF PIRSF000445 1 434 3.3E-133 T 23-04-2016 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 305 9.6E-38 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SHYC_RS06060 b467f4bf5c0cec09490ebb03844b2a1f 446 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 325 419 8.4E-19 T 23-04-2016 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 161 168 - T 23-04-2016 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 PIRSF PIRSF000349 1 199 3.2E-82 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.9E-27 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.9E-27 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 PRINTS PR01703 Manganese superoxide dismutase signature 159 171 2.9E-27 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 PRINTS PR01703 Manganese superoxide dismutase signature 72 85 2.9E-27 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 PRINTS PR01703 Manganese superoxide dismutase signature 123 131 2.9E-27 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 89 3.5E-35 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 SUPERFAMILY SSF46609 1 90 1.7E-39 T 23-04-2016 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 95 193 3.4E-42 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 SUPERFAMILY SSF54719 92 198 6.42E-45 T 23-04-2016 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 Gene3D G3DSA:1.10.287.990 20 89 5.5E-32 T 23-04-2016 SHYC_RS06585 f1defd1e0bd15f9ead8adc56cd0f268b 199 PANTHER PTHR11404 1 199 2.5E-106 T 23-04-2016 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854 SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 PANTHER PTHR30505 1 489 3.4E-234 T 23-04-2016 SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 503 643 3.7E-32 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 93 5.0E-16 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 SUPERFAMILY SSF55804 501 644 2.75E-33 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 85 3.4E-32 T 23-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 Pfam PF02378 Phosphotransferase system, EIIC 134 410 2.9E-22 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 503 626 4.9E-35 T 23-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 118 463 1.7E-94 T 23-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 Gene3D G3DSA:3.40.50.2300 1 104 1.5E-42 T 23-04-2016 SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 549 565 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 Gene3D G3DSA:3.40.930.10 499 643 5.5E-40 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 PANTHER PTHR30505:SF1 1 489 3.4E-234 T 23-04-2016 SHYC_RS01720 b4bc117786f4de8b77d755340b0ef50f 648 SUPERFAMILY SSF52794 2 102 3.31E-37 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHYC_RS08210 887eeea0361c12c31ac3bca414e82e43 430 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 22 426 1.0E-129 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SHYC_RS08210 887eeea0361c12c31ac3bca414e82e43 430 PANTHER PTHR11119 1 430 9.0E-182 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS08210 887eeea0361c12c31ac3bca414e82e43 430 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 346 366 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SHYC_RS08210 887eeea0361c12c31ac3bca414e82e43 430 Pfam PF00860 Permease family 25 399 9.1E-107 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS08210 887eeea0361c12c31ac3bca414e82e43 430 PANTHER PTHR11119:SF49 1 430 9.0E-182 T 23-04-2016 SHYC_RS04125 fc0afc95be78e966191f58a692a81bf0 346 Pfam PF10282 Lactonase, 7-bladed beta-propeller 5 344 3.0E-95 T 23-04-2016 IPR019405 Lactonase, 7-bladed beta propeller KEGG: 00030+3.1.1.31|UniPathway: UPA00115 SHYC_RS04125 fc0afc95be78e966191f58a692a81bf0 346 SUPERFAMILY SSF51004 59 345 1.31E-36 T 23-04-2016 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain SHYC_RS04125 fc0afc95be78e966191f58a692a81bf0 346 PANTHER PTHR30344:SF1 1 345 4.5E-85 T 23-04-2016 SHYC_RS04125 fc0afc95be78e966191f58a692a81bf0 346 PANTHER PTHR30344 1 345 4.5E-85 T 23-04-2016 SHYC_RS04125 fc0afc95be78e966191f58a692a81bf0 346 Gene3D G3DSA:2.130.10.10 5 345 8.0E-78 T 23-04-2016 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 SHYC_RS10195 5b1f0e9af9b452060e831356f2bc7e89 338 Pfam PF01032 FecCD transport family 20 334 9.7E-85 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS10195 5b1f0e9af9b452060e831356f2bc7e89 338 SUPERFAMILY SSF81345 5 334 2.48E-77 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS10195 5b1f0e9af9b452060e831356f2bc7e89 338 Gene3D G3DSA:1.10.3470.10 7 336 2.0E-89 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS10195 5b1f0e9af9b452060e831356f2bc7e89 338 PANTHER PTHR30472:SF16 7 336 2.4E-117 T 23-04-2016 SHYC_RS10195 5b1f0e9af9b452060e831356f2bc7e89 338 PANTHER PTHR30472 7 336 2.4E-117 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PANTHER PTHR22912 192 503 6.6E-190 T 23-04-2016 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 457 479 2.3E-40 T 23-04-2016 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 208 227 2.3E-40 T 23-04-2016 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 305 323 2.3E-40 T 23-04-2016 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 431 447 2.3E-40 T 23-04-2016 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 347 365 2.3E-40 T 23-04-2016 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 507 5.3E-237 T 23-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PIRSF PIRSF000238 1 507 7.7E-242 T 23-04-2016 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 Gene3D G3DSA:3.40.30.10 1 92 1.3E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 Gene3D G3DSA:3.40.30.10 102 191 4.4E-32 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 206 489 7.2E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 335 355 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 Gene3D G3DSA:3.50.50.60 203 308 6.5E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 SUPERFAMILY SSF52833 103 191 7.67E-18 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 SUPERFAMILY SSF51905 198 504 7.78E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 328 340 9.0E-66 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 207 229 9.0E-66 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 306 314 9.0E-66 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 395 411 9.0E-66 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 467 485 9.0E-66 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 259 269 9.0E-66 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 254 9.0E-66 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 433 454 9.0E-66 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 343 367 9.0E-66 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 Pfam PF13192 Thioredoxin domain 123 188 1.4E-5 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 SUPERFAMILY SSF52833 1 99 1.7E-27 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 Gene3D G3DSA:3.50.50.60 309 501 2.1E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11550 b55090cd4b66a75348dff6fef9631c87 507 PANTHER PTHR22912:SF107 192 503 6.6E-190 T 23-04-2016 SHYC_RS03175 8761c5f3497ac6373cbcc02bd0e0c3c8 37 PANTHER PTHR18804 1 37 3.0E-18 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03175 8761c5f3497ac6373cbcc02bd0e0c3c8 37 SUPERFAMILY SSF57840 1 37 9.81E-17 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03175 8761c5f3497ac6373cbcc02bd0e0c3c8 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 6.9E-24 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03175 8761c5f3497ac6373cbcc02bd0e0c3c8 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 3.0E-8 T 23-04-2016 SHYC_RS03175 8761c5f3497ac6373cbcc02bd0e0c3c8 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.381 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03175 8761c5f3497ac6373cbcc02bd0e0c3c8 37 Pfam PF00444 Ribosomal protein L36 1 37 9.8E-19 T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03175 8761c5f3497ac6373cbcc02bd0e0c3c8 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 23-04-2016 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS09640 001aaa8f206d2e35b039c5bfc214cf95 314 Gene3D G3DSA:3.10.28.10 119 199 2.2E-8 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 SHYC_RS09640 001aaa8f206d2e35b039c5bfc214cf95 314 PANTHER PTHR37307 2 310 1.0E-120 T 23-04-2016 SHYC_RS09640 001aaa8f206d2e35b039c5bfc214cf95 314 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 20 103 4.1E-33 T 23-04-2016 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain SHYC_RS09640 001aaa8f206d2e35b039c5bfc214cf95 314 Pfam PF02650 WhiA C-terminal HTH domain 219 303 2.1E-36 T 23-04-2016 IPR023054 Sporulation regulator WhiA, C-terminal SHYC_RS09640 001aaa8f206d2e35b039c5bfc214cf95 314 SUPERFAMILY SSF55608 119 220 6.8E-19 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 SHYC_RS09640 001aaa8f206d2e35b039c5bfc214cf95 314 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 306 34.655 T 23-04-2016 IPR003802 Sporulation regulator WhiA GO:0043937 SHYC_RS09640 001aaa8f206d2e35b039c5bfc214cf95 314 Pfam PF14527 WhiA LAGLIDADG-like domain 124 216 1.6E-32 T 23-04-2016 SHYC_RS09640 001aaa8f206d2e35b039c5bfc214cf95 314 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 304 2.5E-129 T 23-04-2016 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Pfam PF00009 Elongation factor Tu GTP binding domain 8 280 1.7E-70 T 23-04-2016 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Pfam PF14492 Elongation Factor G, domain II 403 476 1.6E-33 T 23-04-2016 IPR009022 Elongation factor G, III-V domain SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Gene3D G3DSA:3.30.70.240 598 684 1.8E-36 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Hamap MF_00054_B Elongation factor G [fusA]. 6 690 108.728 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 SMART SM00889 479 597 2.7E-71 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PANTHER PTHR23115 8 177 0.0 T 23-04-2016 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PANTHER PTHR23115 253 281 0.0 T 23-04-2016 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PANTHER PTHR23115 302 690 0.0 T 23-04-2016 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 SUPERFAMILY SSF54980 403 480 6.12E-25 T 23-04-2016 IPR009022 Elongation factor G, III-V domain SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PRINTS PR00315 GTP-binding elongation factor signature 130 139 1.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-16 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 691 0.0 T 23-04-2016 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 SUPERFAMILY SSF54980 602 689 1.06E-30 T 23-04-2016 IPR009022 Elongation factor G, III-V domain SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Pfam PF00679 Elongation factor G C-terminus 599 685 2.8E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Gene3D G3DSA:3.30.70.870 405 478 3.2E-36 T 23-04-2016 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Pfam PF03144 Elongation factor Tu domain 2 323 390 1.9E-14 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 SUPERFAMILY SSF50447 263 403 1.21E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 SMART SM00838 599 686 6.1E-57 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Gene3D G3DSA:3.40.50.300 7 285 1.1E-107 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PANTHER PTHR23115:SF66 8 177 0.0 T 23-04-2016 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PANTHER PTHR23115:SF66 253 281 0.0 T 23-04-2016 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 PANTHER PTHR23115:SF66 302 690 0.0 T 23-04-2016 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Pfam PF03764 Elongation factor G, domain IV 478 596 8.4E-45 T 23-04-2016 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 179 1.9E-42 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Gene3D G3DSA:2.40.30.10 304 404 8.8E-38 T 23-04-2016 SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 SUPERFAMILY SSF52540 6 280 5.95E-111 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 SUPERFAMILY SSF54211 478 598 1.8E-42 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS10635 86245d8603833578d19b1d17d73de059 693 Gene3D G3DSA:3.30.230.10 483 597 3.0E-50 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHYC_RS10395 ed07963d55ebcbae954cd3d954a97cab 141 SUPERFAMILY SSF50814 4 136 4.15E-33 T 23-04-2016 IPR011038 Calycin-like SHYC_RS10395 ed07963d55ebcbae954cd3d954a97cab 141 Gene3D G3DSA:2.40.128.20 2 137 2.6E-35 T 23-04-2016 IPR012674 Calycin SHYC_RS10395 ed07963d55ebcbae954cd3d954a97cab 141 PANTHER PTHR41323 1 138 1.6E-27 T 23-04-2016 SHYC_RS10395 ed07963d55ebcbae954cd3d954a97cab 141 Pfam PF09148 Domain of unknown function (DUF1934) 7 131 9.8E-29 T 23-04-2016 IPR015231 Protein of unknown function DUF1934 SHYC_RS10910 89a3ad542d33bf9ddb01fef077e65b3a 296 SUPERFAMILY SSF64397 3 241 2.75E-73 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SHYC_RS10910 89a3ad542d33bf9ddb01fef077e65b3a 296 Hamap MF_00117 33 kDa chaperonin [hslO]. 3 292 39.056 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SHYC_RS10910 89a3ad542d33bf9ddb01fef077e65b3a 296 Pfam PF01430 Hsp33 protein 4 280 1.6E-84 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SHYC_RS10910 89a3ad542d33bf9ddb01fef077e65b3a 296 SUPERFAMILY SSF118352 233 291 4.05E-16 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SHYC_RS10910 89a3ad542d33bf9ddb01fef077e65b3a 296 PIRSF PIRSF005261 1 293 2.1E-72 T 23-04-2016 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 SHYC_RS10910 89a3ad542d33bf9ddb01fef077e65b3a 296 PANTHER PTHR30111:SF1 1 296 1.6E-92 T 23-04-2016 SHYC_RS10910 89a3ad542d33bf9ddb01fef077e65b3a 296 Gene3D G3DSA:3.55.30.10 3 235 1.9E-83 T 23-04-2016 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 SHYC_RS10910 89a3ad542d33bf9ddb01fef077e65b3a 296 Gene3D G3DSA:3.90.1280.10 236 291 1.4E-19 T 23-04-2016 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 SHYC_RS10910 89a3ad542d33bf9ddb01fef077e65b3a 296 PANTHER PTHR30111 1 296 1.6E-92 T 23-04-2016 SHYC_RS03300 0ac005fc9f41b2a4d0198cd098777084 504 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 47 492 2.9E-152 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SHYC_RS03300 0ac005fc9f41b2a4d0198cd098777084 504 PANTHER PTHR30047:SF2 7 504 1.3E-218 T 23-04-2016 SHYC_RS03300 0ac005fc9f41b2a4d0198cd098777084 504 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 9 492 6.9E-183 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SHYC_RS03300 0ac005fc9f41b2a4d0198cd098777084 504 ProSitePatterns PS01303 BCCT family of transporters signature. 313 322 - T 23-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 SHYC_RS03300 0ac005fc9f41b2a4d0198cd098777084 504 PANTHER PTHR30047 7 504 1.3E-218 T 23-04-2016 SHYC_RS06285 8b500418bc5dd5c5fb2d98a883e5820d 142 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 4 142 24.719 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHYC_RS06285 8b500418bc5dd5c5fb2d98a883e5820d 142 SMART SM00732 4 107 4.9E-31 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SHYC_RS06285 8b500418bc5dd5c5fb2d98a883e5820d 142 Gene3D G3DSA:3.30.420.140 5 141 1.3E-46 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SHYC_RS06285 8b500418bc5dd5c5fb2d98a883e5820d 142 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 7 139 1.3E-40 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHYC_RS06285 8b500418bc5dd5c5fb2d98a883e5820d 142 SUPERFAMILY SSF53098 5 141 2.43E-41 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS06285 8b500418bc5dd5c5fb2d98a883e5820d 142 PANTHER PTHR33317 6 142 1.1E-40 T 23-04-2016 SHYC_RS06285 8b500418bc5dd5c5fb2d98a883e5820d 142 Pfam PF03652 Holliday junction resolvase 5 140 5.1E-41 T 23-04-2016 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 SHYC_RS10280 a7a81cedebdc3df2ecdf5b457c257720 259 Pfam PF00005 ABC transporter 17 162 7.1E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS10280 a7a81cedebdc3df2ecdf5b457c257720 259 PANTHER PTHR24220 3 230 2.0E-87 T 23-04-2016 SHYC_RS10280 a7a81cedebdc3df2ecdf5b457c257720 259 SUPERFAMILY SSF52540 2 210 1.16E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10280 a7a81cedebdc3df2ecdf5b457c257720 259 PANTHER PTHR24220:SF581 3 230 2.0E-87 T 23-04-2016 SHYC_RS10280 a7a81cedebdc3df2ecdf5b457c257720 259 SMART SM00382 27 211 8.6E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS10280 a7a81cedebdc3df2ecdf5b457c257720 259 Gene3D G3DSA:3.40.50.300 2 224 1.5E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10280 a7a81cedebdc3df2ecdf5b457c257720 259 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 PANTHER PTHR11252:SF0 2 697 0.0 T 23-04-2016 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Gene3D G3DSA:3.30.1370.10 555 622 1.2E-24 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Pfam PF00013 KH domain 561 617 1.6E-8 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 SUPERFAMILY SSF50249 624 696 3.79E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 SMART SM00322 556 621 8.6E-12 T 23-04-2016 IPR004087 K Homology domain GO:0003676 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 SMART SM00316 624 694 2.3E-26 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Gene3D G3DSA:2.40.50.140 623 696 3.4E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 SUPERFAMILY SSF55666 145 235 8.38E-28 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Gene3D G3DSA:3.30.230.70 3 224 1.0E-88 T 23-04-2016 IPR027408 PNPase/RNase PH domain SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Gene3D G3DSA:3.30.230.70 314 547 6.7E-87 T 23-04-2016 IPR027408 PNPase/RNase PH domain SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Pfam PF03725 3' exoribonuclease family, domain 2 463 532 4.7E-8 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 2.6E-15 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 SUPERFAMILY SSF54211 8 144 7.09E-49 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 697 30.842 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 SUPERFAMILY SSF54791 559 644 8.34E-22 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 695 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Pfam PF01138 3' exoribonuclease family, domain 1 327 460 8.1E-19 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 1.3E-22 T 23-04-2016 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: REACT_21257 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 PIRSF PIRSF005499 2 700 1.0E-297 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Gene3D G3DSA:1.10.10.400 231 313 1.9E-19 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 SUPERFAMILY SSF55666 454 552 2.09E-29 T 23-04-2016 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: REACT_21257 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 SUPERFAMILY SSF54211 298 491 4.25E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 244 324 3.5E-13 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 PANTHER PTHR11252 2 697 0.0 T 23-04-2016 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 SUPERFAMILY SSF46915 239 324 5.49E-15 T 23-04-2016 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 SHYC_RS07800 dce2b2efcd2270cde976d5218defe612 700 Pfam PF00575 S1 RNA binding domain 623 693 8.7E-21 T 23-04-2016 IPR003029 S1 domain GO:0003676 SHYC_RS04045 8e90534ed7cc24f3101464f002f3377c 175 Gene3D G3DSA:1.10.10.10 84 165 1.3E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS04045 8e90534ed7cc24f3101464f002f3377c 175 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 85 164 2.4E-32 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SHYC_RS04045 8e90534ed7cc24f3101464f002f3377c 175 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 87 164 1.1E-28 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SHYC_RS04045 8e90534ed7cc24f3101464f002f3377c 175 PANTHER PTHR10815:SF5 1 164 7.5E-48 T 23-04-2016 SHYC_RS04045 8e90534ed7cc24f3101464f002f3377c 175 SUPERFAMILY SSF46767 84 165 1.07E-27 T 23-04-2016 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 SHYC_RS04045 8e90534ed7cc24f3101464f002f3377c 175 SUPERFAMILY SSF53155 3 89 1.51E-10 T 23-04-2016 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 SHYC_RS04045 8e90534ed7cc24f3101464f002f3377c 175 PANTHER PTHR10815 1 164 7.5E-48 T 23-04-2016 SHYC_RS04045 8e90534ed7cc24f3101464f002f3377c 175 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 135 141 - T 23-04-2016 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 283 38.938 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 165 183 7.0E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 253 262 7.0E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 131 145 7.0E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 231 242 7.0E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 202 219 7.0E-38 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 Gene3D G3DSA:3.90.226.10 23 281 9.4E-78 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 10 284 1.3E-126 T 23-04-2016 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 PANTHER PTHR22855 4 286 1.5E-154 T 23-04-2016 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 Pfam PF01039 Carboxyl transferase domain 65 244 8.0E-17 T 23-04-2016 IPR000022 Carboxyl transferase KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 PANTHER PTHR22855:SF17 4 286 1.5E-154 T 23-04-2016 SHYC_RS05935 3656bef66fb3caa3748c122cad704291 286 SUPERFAMILY SSF52096 30 282 3.91E-83 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 Pfam PF07687 Peptidase dimerisation domain 173 269 3.7E-8 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 Pfam PF01546 Peptidase family M20/M25/M40 64 354 1.4E-26 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 SUPERFAMILY SSF53187 3 188 2.93E-68 T 23-04-2016 SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 SUPERFAMILY SSF53187 289 367 2.93E-68 T 23-04-2016 SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 PANTHER PTHR11014 5 374 4.2E-156 T 23-04-2016 SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 PANTHER PTHR11014:SF107 5 374 4.2E-156 T 23-04-2016 SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 Gene3D G3DSA:3.30.70.360 173 288 7.6E-35 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 Gene3D G3DSA:3.40.630.10 5 169 5.0E-76 T 23-04-2016 SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 Gene3D G3DSA:3.40.630.10 289 371 5.0E-76 T 23-04-2016 SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 9 358 1.2E-106 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 PIRSF PIRSF005962 1 373 8.1E-107 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 SHYC_RS02705 350f523296077216a8450a111ebe7b4f 374 SUPERFAMILY SSF55031 175 282 5.89E-28 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS09070 ad049568b3a60666f94de934699ba08b 269 Gene3D G3DSA:2.60.200.30 120 239 3.3E-30 T 23-04-2016 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHYC_RS09070 ad049568b3a60666f94de934699ba08b 269 Gene3D G3DSA:3.40.50.10330 29 119 6.5E-19 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHYC_RS09070 ad049568b3a60666f94de934699ba08b 269 PANTHER PTHR20275 16 262 3.9E-64 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHYC_RS09070 ad049568b3a60666f94de934699ba08b 269 Pfam PF01513 ATP-NAD kinase 37 218 3.3E-26 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHYC_RS09070 ad049568b3a60666f94de934699ba08b 269 SUPERFAMILY SSF111331 23 262 4.97E-63 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SHYC_RS09070 ad049568b3a60666f94de934699ba08b 269 Hamap MF_00361 NAD kinase [nadK]. 1 264 23.373 T 23-04-2016 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHYC_RS04660 c336c6302db11fffc209c7b11059a070 659 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 623 655 4.5E-5 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain SHYC_RS04660 c336c6302db11fffc209c7b11059a070 659 SUPERFAMILY SSF49401 312 484 6.21E-19 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS04660 c336c6302db11fffc209c7b11059a070 659 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 1 41 1.7E-8 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS04660 c336c6302db11fffc209c7b11059a070 659 Gene3D G3DSA:2.60.40.1290 311 494 5.3E-19 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS04660 c336c6302db11fffc209c7b11059a070 659 Pfam PF04650 YSIRK type signal peptide 9 29 4.1E-6 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS04660 c336c6302db11fffc209c7b11059a070 659 Gene3D G3DSA:2.60.40.1280 159 308 7.2E-35 T 23-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 SHYC_RS04660 c336c6302db11fffc209c7b11059a070 659 SUPERFAMILY SSF49401 159 308 8.32E-27 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS07615 6b4b93722cdef85da9956a968cf52909 121 Gene3D G3DSA:1.10.1660.10 15 93 5.9E-20 T 23-04-2016 SHYC_RS07615 6b4b93722cdef85da9956a968cf52909 121 PANTHER PTHR30204 5 109 1.2E-39 T 23-04-2016 SHYC_RS07615 6b4b93722cdef85da9956a968cf52909 121 SMART SM00422 13 81 2.6E-24 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHYC_RS07615 6b4b93722cdef85da9956a968cf52909 121 SUPERFAMILY SSF46955 14 85 2.67E-19 T 23-04-2016 IPR009061 Putative DNA-binding domain SHYC_RS07615 6b4b93722cdef85da9956a968cf52909 121 PANTHER PTHR30204:SF8 5 109 1.2E-39 T 23-04-2016 SHYC_RS07615 6b4b93722cdef85da9956a968cf52909 121 Pfam PF13411 MerR HTH family regulatory protein 15 79 1.9E-19 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHYC_RS08180 8c5a9a114868d9ef8ef5468e1a27b1fe 305 PANTHER PTHR11938:SF5 3 303 6.2E-71 T 23-04-2016 SHYC_RS08180 8c5a9a114868d9ef8ef5468e1a27b1fe 305 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 301 39.056 T 23-04-2016 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 SHYC_RS08180 8c5a9a114868d9ef8ef5468e1a27b1fe 305 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 300 8.9E-111 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SHYC_RS08180 8c5a9a114868d9ef8ef5468e1a27b1fe 305 PIRSF PIRSF000164 1 303 3.2E-81 T 23-04-2016 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 Reactome: REACT_1698 SHYC_RS08180 8c5a9a114868d9ef8ef5468e1a27b1fe 305 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 239 259 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SHYC_RS08180 8c5a9a114868d9ef8ef5468e1a27b1fe 305 SUPERFAMILY SSF51395 2 300 1.6E-81 T 23-04-2016 SHYC_RS08180 8c5a9a114868d9ef8ef5468e1a27b1fe 305 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 23-04-2016 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 SHYC_RS08180 8c5a9a114868d9ef8ef5468e1a27b1fe 305 Pfam PF01180 Dihydroorotate dehydrogenase 4 286 6.3E-88 T 23-04-2016 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 SHYC_RS08180 8c5a9a114868d9ef8ef5468e1a27b1fe 305 PANTHER PTHR11938 3 303 6.2E-71 T 23-04-2016 SHYC_RS08180 8c5a9a114868d9ef8ef5468e1a27b1fe 305 Gene3D G3DSA:3.20.20.70 1 301 7.3E-92 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS08030 2725b67f6bd45f6552caafba410e18ff 77 Hamap MF_01217 Acyl carrier protein [acpP]. 2 76 22.633 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SHYC_RS08030 2725b67f6bd45f6552caafba410e18ff 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 31 46 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site SHYC_RS08030 2725b67f6bd45f6552caafba410e18ff 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 4 74 1.1E-32 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SHYC_RS08030 2725b67f6bd45f6552caafba410e18ff 77 SUPERFAMILY SSF47336 4 75 9.42E-24 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS08030 2725b67f6bd45f6552caafba410e18ff 77 Pfam PF00550 Phosphopantetheine attachment site 5 72 3.3E-17 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS08030 2725b67f6bd45f6552caafba410e18ff 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 34 74 1.0E-11 T 23-04-2016 IPR003231 Acyl carrier protein (ACP) GO:0006633 UniPathway: UPA00094 SHYC_RS08030 2725b67f6bd45f6552caafba410e18ff 77 Gene3D G3DSA:1.10.1200.10 3 74 1.9E-31 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS08030 2725b67f6bd45f6552caafba410e18ff 77 PANTHER PTHR20863 2 72 2.4E-28 T 23-04-2016 SHYC_RS06195 7382711d7e28416e89226f5edd58f40f 172 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 1.8E-67 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SHYC_RS06195 7382711d7e28416e89226f5edd58f40f 172 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 37.638 T 23-04-2016 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|UniPathway: UPA00588 SHYC_RS06195 7382711d7e28416e89226f5edd58f40f 172 PANTHER PTHR11776 1 172 2.2E-73 T 23-04-2016 SHYC_RS06195 7382711d7e28416e89226f5edd58f40f 172 Gene3D G3DSA:3.40.50.2020 2 171 1.1E-61 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS06195 7382711d7e28416e89226f5edd58f40f 172 PANTHER PTHR11776:SF0 1 172 2.2E-73 T 23-04-2016 SHYC_RS06195 7382711d7e28416e89226f5edd58f40f 172 Pfam PF00156 Phosphoribosyl transferase domain 35 152 5.5E-14 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHYC_RS06195 7382711d7e28416e89226f5edd58f40f 172 SUPERFAMILY SSF53271 3 164 5.82E-51 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 SUPERFAMILY SSF158472 170 219 9.15E-5 T 23-04-2016 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 PANTHER PTHR24423 207 565 1.3E-97 T 23-04-2016 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 PANTHER PTHR24423 8 13 1.3E-97 T 23-04-2016 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 Gene3D G3DSA:3.30.565.10 398 565 4.2E-48 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 SMART SM00388 345 412 1.7E-22 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 Pfam PF00989 PAS fold 230 336 6.3E-5 T 23-04-2016 IPR013767 PAS fold GO:0006355 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 Gene3D G3DSA:3.30.450.20 227 336 1.2E-11 T 23-04-2016 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 SUPERFAMILY SSF55785 219 337 4.36E-9 T 23-04-2016 IPR000014 PAS domain SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 SUPERFAMILY SSF47384 331 412 3.92E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 457 566 1.9E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 SMART SM00304 170 222 3.9E-4 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 SMART SM00091 229 294 0.0041 T 23-04-2016 IPR000014 PAS domain SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 228 344 8.5E-6 T 23-04-2016 IPR000014 PAS domain SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 Pfam PF00512 His Kinase A (phospho-acceptor) domain 346 411 3.0E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 493 507 4.8E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 546 4.8E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 521 4.8E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 565 4.8E-19 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 SMART SM00387 456 566 3.3E-35 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 SUPERFAMILY SSF55874 401 565 7.6E-47 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS05970 b769b24c356f15acac2d4ec68ade3649 566 Gene3D G3DSA:1.10.287.130 337 397 6.0E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS05360 7c35630e15085c026d87e535f8b616db 142 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 23-04-2016 IPR019808 Histidine triad, conserved site SHYC_RS05360 7c35630e15085c026d87e535f8b616db 142 PRINTS PR00332 Histidine triad family signature 93 103 3.8E-16 T 23-04-2016 IPR001310 Histidine triad (HIT) protein SHYC_RS05360 7c35630e15085c026d87e535f8b616db 142 PRINTS PR00332 Histidine triad family signature 5 21 3.8E-16 T 23-04-2016 IPR001310 Histidine triad (HIT) protein SHYC_RS05360 7c35630e15085c026d87e535f8b616db 142 PRINTS PR00332 Histidine triad family signature 26 44 3.8E-16 T 23-04-2016 IPR001310 Histidine triad (HIT) protein SHYC_RS05360 7c35630e15085c026d87e535f8b616db 142 SUPERFAMILY SSF54197 3 127 1.04E-41 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 SHYC_RS05360 7c35630e15085c026d87e535f8b616db 142 PANTHER PTHR23089:SF14 3 140 1.8E-67 T 23-04-2016 SHYC_RS05360 7c35630e15085c026d87e535f8b616db 142 PANTHER PTHR23089 3 140 1.8E-67 T 23-04-2016 IPR001310 Histidine triad (HIT) protein SHYC_RS05360 7c35630e15085c026d87e535f8b616db 142 Pfam PF01230 HIT domain 13 107 2.0E-24 T 23-04-2016 IPR001310 Histidine triad (HIT) protein SHYC_RS05360 7c35630e15085c026d87e535f8b616db 142 Gene3D G3DSA:3.30.428.10 1 109 2.8E-39 T 23-04-2016 IPR011146 HIT-like domain GO:0003824 SHYC_RS02910 a0aeefe9157c17fbca74e00803284260 286 Pfam PF00480 ROK family 4 283 3.3E-34 T 23-04-2016 IPR000600 ROK family SHYC_RS02910 a0aeefe9157c17fbca74e00803284260 286 PANTHER PTHR18964:SF133 4 286 3.8E-47 T 23-04-2016 SHYC_RS02910 a0aeefe9157c17fbca74e00803284260 286 PANTHER PTHR18964 4 286 3.8E-47 T 23-04-2016 SHYC_RS02910 a0aeefe9157c17fbca74e00803284260 286 Gene3D G3DSA:3.30.420.40 2 105 3.8E-15 T 23-04-2016 SHYC_RS02910 a0aeefe9157c17fbca74e00803284260 286 SUPERFAMILY SSF53067 1 283 3.28E-40 T 23-04-2016 SHYC_RS02910 a0aeefe9157c17fbca74e00803284260 286 Gene3D G3DSA:3.30.420.40 107 284 6.0E-37 T 23-04-2016 SHYC_RS08070 9bd8ac2e55fb82fff484ae9c5269219c 552 PANTHER PTHR33434:SF4 1 552 1.1E-244 T 23-04-2016 SHYC_RS08070 9bd8ac2e55fb82fff484ae9c5269219c 552 SMART SM01121 236 552 4.2E-179 T 23-04-2016 IPR033470 Uncharacterised protein, DhaK domain SHYC_RS08070 9bd8ac2e55fb82fff484ae9c5269219c 552 SUPERFAMILY SSF101473 3 199 2.62E-47 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SHYC_RS08070 9bd8ac2e55fb82fff484ae9c5269219c 552 SMART SM01120 35 200 1.6E-71 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SHYC_RS08070 9bd8ac2e55fb82fff484ae9c5269219c 552 Pfam PF13684 Dihydroxyacetone kinase family 237 552 2.2E-117 T 23-04-2016 IPR033470 Uncharacterised protein, DhaK domain SHYC_RS08070 9bd8ac2e55fb82fff484ae9c5269219c 552 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 10 552 1.1E-207 T 23-04-2016 IPR019986 DAK2 domain-containing protein YloV SHYC_RS08070 9bd8ac2e55fb82fff484ae9c5269219c 552 Pfam PF02734 DAK2 domain 35 199 2.1E-42 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SHYC_RS08070 9bd8ac2e55fb82fff484ae9c5269219c 552 PANTHER PTHR33434 1 552 1.1E-244 T 23-04-2016 SHYC_RS02210 6bdb22c48007dfb4fc67caf7d3890926 142 PANTHER PTHR34818 3 139 6.4E-34 T 23-04-2016 SHYC_RS02210 6bdb22c48007dfb4fc67caf7d3890926 142 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 5 129 5.5E-19 T 23-04-2016 SHYC_RS02210 6bdb22c48007dfb4fc67caf7d3890926 142 Gene3D G3DSA:2.30.110.10 2 127 3.9E-34 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SHYC_RS02210 6bdb22c48007dfb4fc67caf7d3890926 142 SUPERFAMILY SSF50475 5 130 8.61E-26 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SHYC_RS05570 6eb08b7b2d774ec87443bb763d0666fb 153 SUPERFAMILY SSF88659 96 151 1.31E-6 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS05570 6eb08b7b2d774ec87443bb763d0666fb 153 Gene3D G3DSA:1.10.10.10 102 151 1.5E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS05570 6eb08b7b2d774ec87443bb763d0666fb 153 Pfam PF04542 Sigma-70 region 2 6 74 3.8E-7 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS05570 6eb08b7b2d774ec87443bb763d0666fb 153 SUPERFAMILY SSF88946 3 80 2.49E-7 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS05570 6eb08b7b2d774ec87443bb763d0666fb 153 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 150 1.1E-12 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS05570 6eb08b7b2d774ec87443bb763d0666fb 153 Gene3D G3DSA:1.10.1740.10 3 81 4.0E-6 T 23-04-2016 SHYC_RS01275 e35e3c1c8c22f61ccb83460ff2eafa9e 303 Pfam PF04227 Indigoidine synthase A like protein 10 298 4.9E-132 T 23-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 SHYC_RS01275 e35e3c1c8c22f61ccb83460ff2eafa9e 303 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 9 302 42.586 T 23-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 SHYC_RS01275 e35e3c1c8c22f61ccb83460ff2eafa9e 303 SUPERFAMILY SSF110581 3 301 4.71E-116 T 23-04-2016 SHYC_RS01275 e35e3c1c8c22f61ccb83460ff2eafa9e 303 PANTHER PTHR10584:SF1 5 254 2.8E-91 T 23-04-2016 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 SHYC_RS01275 e35e3c1c8c22f61ccb83460ff2eafa9e 303 PANTHER PTHR10584 5 254 2.8E-91 T 23-04-2016 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 Gene3D G3DSA:3.40.192.10 7 139 2.2E-50 T 23-04-2016 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 38.351 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 23-04-2016 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 SUPERFAMILY SSF53223 1 121 2.69E-40 T 23-04-2016 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 Gene3D G3DSA:3.40.50.720 140 263 1.5E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 1.3E-67 T 23-04-2016 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 PANTHER PTHR10025 1 285 1.9E-158 T 23-04-2016 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 SUPERFAMILY SSF51735 122 278 6.49E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 6.0E-40 T 23-04-2016 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 1.9E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.9E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.9E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.9E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.9E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.9E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS08765 a041d92617b277e8a2161c04c2f6c270 285 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.9E-81 T 23-04-2016 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0003824|GO:0004488|GO:0009396|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|UniPathway: UPA00193 SHYC_RS03375 083002835ec76430624f777374cd86b9 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 1.8E-11 T 23-04-2016 SHYC_RS03375 083002835ec76430624f777374cd86b9 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 1.8E-11 T 23-04-2016 SHYC_RS03375 083002835ec76430624f777374cd86b9 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 302 326 1.8E-11 T 23-04-2016 SHYC_RS03375 083002835ec76430624f777374cd86b9 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.8E-11 T 23-04-2016 SHYC_RS03375 083002835ec76430624f777374cd86b9 476 SUPERFAMILY SSF103473 248 471 3.01E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS03375 083002835ec76430624f777374cd86b9 476 SUPERFAMILY SSF103473 11 200 3.01E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS03375 083002835ec76430624f777374cd86b9 476 PANTHER PTHR23501:SF82 10 474 1.9E-206 T 23-04-2016 SHYC_RS03375 083002835ec76430624f777374cd86b9 476 PANTHER PTHR23501 10 474 1.9E-206 T 23-04-2016 SHYC_RS03375 083002835ec76430624f777374cd86b9 476 Pfam PF07690 Major Facilitator Superfamily 19 409 2.1E-47 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS03375 083002835ec76430624f777374cd86b9 476 Gene3D G3DSA:1.20.1250.20 261 469 8.9E-16 T 23-04-2016 SHYC_RS03375 083002835ec76430624f777374cd86b9 476 Gene3D G3DSA:1.20.1250.20 11 190 3.7E-32 T 23-04-2016 SHYC_RS03375 083002835ec76430624f777374cd86b9 476 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 417 2.3E-97 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 Gene3D G3DSA:3.20.20.70 803 1179 8.3E-173 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 Pfam PF01645 Conserved region in glutamate synthase 788 1153 7.0E-155 T 23-04-2016 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 PANTHER PTHR11938:SF1 11 1467 0.0 T 23-04-2016 SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 PANTHER PTHR11938 11 1467 0.0 T 23-04-2016 SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 Pfam PF04898 Glutamate synthase central domain 459 733 1.1E-98 T 23-04-2016 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 UniPathway: UPA00045 SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 Gene3D G3DSA:3.60.20.10 22 439 8.5E-157 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 Gene3D G3DSA:3.20.20.70 448 765 4.1E-90 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 SUPERFAMILY SSF51395 441 1189 1.65E-237 T 23-04-2016 SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 Pfam PF00310 Glutamine amidotransferases class-II 22 431 5.9E-156 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 Pfam PF01493 GXGXG motif 1232 1416 6.7E-69 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 SUPERFAMILY SSF56235 22 433 6.67E-126 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 SUPERFAMILY SSF69336 1202 1466 6.67E-79 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SHYC_RS11135 5cbeac98c3a8806d1d6e4c24f6c6d859 1500 Gene3D G3DSA:2.160.20.60 1211 1474 5.8E-88 T 23-04-2016 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 SHYC_RS01080 d85b3bb25769bc8328111e3ff02eb8eb 502 TIGRFAM TIGR02918 TIGR02918: accessory Sec system glycosylation protein GtfA 2 499 7.8E-241 T 23-04-2016 IPR014267 Glycosyltransferase Gtf1 GO:0016757 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- SHYC_RS01080 d85b3bb25769bc8328111e3ff02eb8eb 502 Pfam PF00534 Glycosyl transferases group 1 312 453 1.2E-23 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 SHYC_RS01080 d85b3bb25769bc8328111e3ff02eb8eb 502 Hamap MF_01472 Glycosyltransferase Gtf1 [gtf1]. 2 499 35.085 T 23-04-2016 IPR014267 Glycosyltransferase Gtf1 GO:0016757 KEGG: 00051+2.4.1.-|KEGG: 00512+2.4.1.-|KEGG: 00513+2.4.1.-|KEGG: 00514+2.4.1.-|KEGG: 00522+2.4.1.-|KEGG: 00533+2.4.1.-|KEGG: 00540+2.4.1.-|KEGG: 00550+2.4.1.-|KEGG: 00561+2.4.1.-|KEGG: 00563+2.4.1.-|KEGG: 00600+2.4.1.-|KEGG: 00601+2.4.1.-|KEGG: 00603+2.4.1.-|KEGG: 00604+2.4.1.-|KEGG: 00906+2.4.1.-|KEGG: 00908+2.4.1.-|KEGG: 00941+2.4.1.-|KEGG: 00942+2.4.1.-|KEGG: 00944+2.4.1.-|KEGG: 00945+2.4.1.-|KEGG: 00965+2.4.1.- SHYC_RS01080 d85b3bb25769bc8328111e3ff02eb8eb 502 Gene3D G3DSA:3.40.50.2000 315 454 3.4E-13 T 23-04-2016 SHYC_RS01080 d85b3bb25769bc8328111e3ff02eb8eb 502 PANTHER PTHR12526 323 455 2.0E-21 T 23-04-2016 SHYC_RS01080 d85b3bb25769bc8328111e3ff02eb8eb 502 SUPERFAMILY SSF53756 149 455 3.09E-34 T 23-04-2016 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 SUPERFAMILY SSF53623 102 305 1.98E-50 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 Gene3D G3DSA:3.90.190.20 309 441 3.3E-41 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 Gene3D G3DSA:3.40.50.720 7 98 7.5E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 PANTHER PTHR23135:SF2 1 447 8.3E-153 T 23-04-2016 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 SUPERFAMILY SSF53244 307 444 2.61E-38 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 445 33.494 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 443 1.6E-118 T 23-04-2016 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 PANTHER PTHR23135 1 447 8.3E-153 T 23-04-2016 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 Pfam PF08245 Mur ligase middle domain 116 288 8.5E-35 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 Gene3D G3DSA:3.40.1190.10 101 307 4.5E-55 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 Pfam PF02875 Mur ligase family, glutamate ligase domain 309 369 5.1E-8 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS08285 22de8b034a43b1711c66e40e1fb5f0ea 449 SUPERFAMILY SSF51984 6 99 1.7E-16 T 23-04-2016 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 Gene3D G3DSA:3.40.50.1980 18 182 6.3E-50 T 23-04-2016 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00691 Adhesin B signature 71 90 3.0E-71 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00691 Adhesin B signature 216 234 3.0E-71 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00691 Adhesin B signature 239 256 3.0E-71 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00691 Adhesin B signature 261 279 3.0E-71 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00691 Adhesin B signature 27 48 3.0E-71 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00691 Adhesin B signature 132 151 3.0E-71 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00691 Adhesin B signature 190 207 3.0E-71 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00691 Adhesin B signature 282 300 3.0E-71 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00691 Adhesin B signature 52 70 3.0E-71 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 SUPERFAMILY SSF53807 12 303 4.17E-82 T 23-04-2016 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 Pfam PF01297 Zinc-uptake complex component A periplasmic 30 300 2.8E-71 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PANTHER PTHR30477:SF12 1 299 1.3E-118 T 23-04-2016 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 Gene3D G3DSA:3.40.50.1980 183 304 5.3E-39 T 23-04-2016 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00690 Adhesin family signature 71 88 2.3E-48 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00690 Adhesin family signature 58 71 2.3E-48 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00690 Adhesin family signature 190 211 2.3E-48 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00690 Adhesin family signature 243 261 2.3E-48 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00690 Adhesin family signature 27 45 2.3E-48 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PRINTS PR00690 Adhesin family signature 269 288 2.3E-48 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS10290 d5868fdfcbe665a23ec659ce71e9feb1 304 PANTHER PTHR30477 1 299 1.3E-118 T 23-04-2016 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 SUPERFAMILY SSF64484 377 1155 0.0 T 23-04-2016 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 SUPERFAMILY SSF64484 14 289 0.0 T 23-04-2016 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 PANTHER PTHR20856 701 1151 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 ProSitePatterns PS01166 RNA polymerases beta chain signature. 922 934 - T 23-04-2016 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 PANTHER PTHR20856 378 682 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Gene3D G3DSA:2.40.50.150 785 918 1.7E-59 T 23-04-2016 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1147 12.53 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Pfam PF04560 RNA polymerase Rpb2, domain 7 1071 1146 1.4E-25 T 23-04-2016 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Pfam PF04563 RNA polymerase beta subunit 28 453 3.7E-29 T 23-04-2016 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Gene3D G3DSA:3.90.1100.10 616 670 5.6E-152 T 23-04-2016 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Gene3D G3DSA:3.90.1100.10 21 140 5.6E-152 T 23-04-2016 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Gene3D G3DSA:3.90.1100.10 400 546 5.6E-152 T 23-04-2016 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 PANTHER PTHR20856 2 286 0.0 T 23-04-2016 IPR015712 DNA-directed RNA polymerase, subunit 2 GO:0003899|GO:0006351|GO:0032549 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 PANTHER PTHR20856:SF20 2 286 0.0 T 23-04-2016 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 205 895 0.0 T 23-04-2016 IPR010243 DNA-directed RNA polymerase, beta subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Pfam PF10385 RNA polymerase beta subunit external 1 domain 546 613 2.9E-25 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Pfam PF04561 RNA polymerase Rpb2, domain 2 373 409 1.5E-5 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 289 4.4E-27 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Gene3D G3DSA:2.30.150.10 547 613 4.9E-27 T 23-04-2016 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 PANTHER PTHR20856:SF20 701 1151 0.0 T 23-04-2016 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 PANTHER PTHR20856:SF20 378 682 0.0 T 23-04-2016 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Pfam PF00562 RNA polymerase Rpb2, domain 6 674 1069 4.1E-166 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Gene3D G3DSA:3.90.1110.10 375 399 8.2E-72 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Gene3D G3DSA:3.90.1110.10 142 295 8.2E-72 T 23-04-2016 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Pfam PF04565 RNA polymerase Rpb2, domain 3 468 536 8.2E-30 T 23-04-2016 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Gene3D G3DSA:2.40.270.10 919 1047 2.9E-78 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Gene3D G3DSA:2.40.270.10 751 778 2.9E-78 T 23-04-2016 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10660 435a508541ab6c3f6d9fe993483beefa 1183 Gene3D G3DSA:2.40.50.100 672 750 2.4E-26 T 23-04-2016 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 PANTHER PTHR11540 1 317 4.1E-148 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 PIRSF PIRSF000102 2 316 1.4E-107 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 SUPERFAMILY SSF56327 146 312 9.94E-57 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 145 3.6E-46 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 175 181 - T 23-04-2016 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 PANTHER PTHR11540:SF3 1 317 4.1E-148 T 23-04-2016 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 148 310 4.1E-32 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 1.4E-48 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 1.4E-48 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 1.4E-48 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 1.4E-48 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 1.4E-48 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 5 313 44.874 T 23-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 Gene3D G3DSA:3.90.110.10 147 313 2.7E-58 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 10 307 1.2E-125 T 23-04-2016 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|UniPathway: UPA00554 SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 Gene3D G3DSA:3.40.50.720 1 146 1.9E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05625 09404665d5348fb55e1ed38ba3f13a74 317 SUPERFAMILY SSF51735 3 145 1.15E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PANTHER PTHR11946:SF7 468 802 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PANTHER PTHR11946:SF7 286 450 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 1.1E-56 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 1.1E-56 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 1.1E-56 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 1.1E-56 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 1.1E-56 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 1.1E-56 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 1.1E-56 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 397 6.9E-65 T 23-04-2016 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 SUPERFAMILY SSF50677 224 409 2.62E-53 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 411 602 5.2E-19 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PANTHER PTHR11946 2 205 0.0 T 23-04-2016 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PANTHER PTHR11946 468 802 0.0 T 23-04-2016 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 802 23.08 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PANTHER PTHR11946 286 450 0.0 T 23-04-2016 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 Pfam PF09334 tRNA synthetases class I (M) 39 170 1.3E-18 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 SUPERFAMILY SSF52374 410 623 3.55E-144 T 23-04-2016 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 SUPERFAMILY SSF52374 3 224 3.55E-144 T 23-04-2016 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PANTHER PTHR11946 238 263 0.0 T 23-04-2016 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 Gene3D G3DSA:1.10.730.10 604 738 5.1E-41 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 SUPERFAMILY SSF47323 617 802 6.35E-37 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 3 803 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 Pfam PF08264 Anticodon-binding domain of tRNA 656 765 9.9E-22 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 Gene3D G3DSA:3.90.740.10 221 418 1.2E-59 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PANTHER PTHR11946:SF7 238 263 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 PANTHER PTHR11946:SF7 2 205 0.0 T 23-04-2016 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4 SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 Gene3D G3DSA:3.40.50.620 419 603 1.5E-164 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS05650 f1435d35635f268e3ad6f758aca77007 803 Gene3D G3DSA:3.40.50.620 2 220 1.5E-164 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS02570 a7246cefffddd8d591d3fa0da39c3370 154 Gene3D G3DSA:1.10.10.10 6 147 7.2E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02570 a7246cefffddd8d591d3fa0da39c3370 154 Pfam PF12802 MarR family 36 85 7.1E-8 T 23-04-2016 SHYC_RS02570 a7246cefffddd8d591d3fa0da39c3370 154 SUPERFAMILY SSF46785 18 145 9.64E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02570 a7246cefffddd8d591d3fa0da39c3370 154 SMART SM00347 30 133 1.3E-10 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS02570 a7246cefffddd8d591d3fa0da39c3370 154 PANTHER PTHR33164 13 148 1.5E-12 T 23-04-2016 SHYC_RS01105 fc3e9acd8e228ef05d1724ab1635281c 402 SUPERFAMILY SSF56645 14 246 1.22E-44 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SHYC_RS01105 fc3e9acd8e228ef05d1724ab1635281c 402 Gene3D G3DSA:1.10.540.10 11 139 2.5E-14 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SHYC_RS01105 fc3e9acd8e228ef05d1724ab1635281c 402 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 395 6.4E-21 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SHYC_RS01105 fc3e9acd8e228ef05d1724ab1635281c 402 SUPERFAMILY SSF47203 249 399 3.7E-29 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SHYC_RS01105 fc3e9acd8e228ef05d1724ab1635281c 402 PANTHER PTHR10909:SF280 3 402 2.9E-207 T 23-04-2016 SHYC_RS01105 fc3e9acd8e228ef05d1724ab1635281c 402 Gene3D G3DSA:2.40.110.10 141 235 5.8E-27 T 23-04-2016 SHYC_RS01105 fc3e9acd8e228ef05d1724ab1635281c 402 Gene3D G3DSA:1.20.140.10 236 398 1.1E-29 T 23-04-2016 SHYC_RS01105 fc3e9acd8e228ef05d1724ab1635281c 402 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 25 137 1.0E-7 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SHYC_RS01105 fc3e9acd8e228ef05d1724ab1635281c 402 PANTHER PTHR10909 3 402 2.9E-207 T 23-04-2016 SHYC_RS01105 fc3e9acd8e228ef05d1724ab1635281c 402 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 142 235 3.1E-21 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 Gene3D G3DSA:3.30.70.360 181 282 1.9E-21 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 PANTHER PTHR11014 2 370 6.3E-144 T 23-04-2016 SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 144 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 Pfam PF01546 Peptidase family M20/M25/M40 74 369 1.8E-21 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 PANTHER PTHR11014:SF61 2 370 6.3E-144 T 23-04-2016 SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 368 1.1E-128 T 23-04-2016 IPR010162 Peptidase M20B, peptidase T SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 SUPERFAMILY SSF53187 288 369 1.18E-61 T 23-04-2016 SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 SUPERFAMILY SSF53187 5 179 1.18E-61 T 23-04-2016 SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 Pfam PF07687 Peptidase dimerisation domain 181 275 1.1E-11 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 Gene3D G3DSA:3.40.630.10 288 369 5.2E-74 T 23-04-2016 SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 Gene3D G3DSA:3.40.630.10 1 179 5.2E-74 T 23-04-2016 SHYC_RS06825 a172e179e5f2dd7524341ca27d34b7fa 370 SUPERFAMILY SSF55031 181 288 4.45E-18 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 12 335 82.308 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 13 334 4.8E-125 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 56 70 5.9E-30 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 89 102 5.9E-30 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 313 324 5.9E-30 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 233 243 5.9E-30 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 129 143 5.9E-30 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PANTHER PTHR11405:SF44 299 335 7.3E-183 T 23-04-2016 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PANTHER PTHR11405:SF44 1 279 7.3E-183 T 23-04-2016 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 Gene3D G3DSA:3.40.50.1370 10 149 3.4E-53 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 SUPERFAMILY SSF53671 10 334 6.29E-102 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PANTHER PTHR11405 299 335 7.3E-183 T 23-04-2016 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PANTHER PTHR11405 1 279 7.3E-183 T 23-04-2016 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 159 332 1.2E-56 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 Gene3D G3DSA:3.40.50.1370 150 321 1.6E-71 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 153 3.2E-43 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 58 65 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 58 77 4.8E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 299 322 4.8E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 140 151 4.8E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS00845 4df12d44dec58ca23c0be3aa67c647aa 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 279 4.8E-26 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS01150 6fcc83ae7c29bce127bf55ed8c26cde2 86 Pfam PF02583 Metal-sensitive transcriptional repressor 4 83 3.6E-23 T 23-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SHYC_RS01150 6fcc83ae7c29bce127bf55ed8c26cde2 86 PANTHER PTHR33677 1 86 2.2E-33 T 23-04-2016 SHYC_RS01150 6fcc83ae7c29bce127bf55ed8c26cde2 86 PANTHER PTHR33677:SF2 1 86 2.2E-33 T 23-04-2016 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 PANTHER PTHR13799:SF13 1 131 1.1E-105 T 23-04-2016 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 PANTHER PTHR13799:SF13 155 366 1.1E-105 T 23-04-2016 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 PANTHER PTHR13799 1 131 1.1E-105 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 PANTHER PTHR13799 155 366 1.1E-105 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 Gene3D G3DSA:3.40.1390.30 1 112 4.3E-44 T 23-04-2016 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 SUPERFAMILY SSF102705 1 365 6.93E-112 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 Gene3D G3DSA:3.40.1390.30 235 325 9.8E-35 T 23-04-2016 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 Gene3D G3DSA:3.40.1390.30 113 129 9.8E-35 T 23-04-2016 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 Gene3D G3DSA:3.30.70.830 130 233 1.9E-32 T 23-04-2016 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 346 4.1E-79 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 362 4.2E-68 T 23-04-2016 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 SHYC_RS06545 1dc9264e07da82928915f065495947b6 366 PIRSF PIRSF037489 1 366 1.3E-124 T 23-04-2016 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 2 98 1.1E-13 T 23-04-2016 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 Gene3D G3DSA:1.10.3730.10 160 265 1.5E-27 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 PANTHER PTHR11645:SF0 1 274 6.7E-91 T 23-04-2016 SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 PANTHER PTHR11645 1 274 6.7E-91 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 3 265 3.2E-78 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 PIRSF PIRSF000193 1 268 8.0E-83 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 SUPERFAMILY SSF51735 1 159 2.01E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 Gene3D G3DSA:3.40.50.720 1 159 1.4E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 SUPERFAMILY SSF48179 160 267 1.05E-26 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 1 265 21.413 T 23-04-2016 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SHYC_RS06850 355e8ee49819b8adf1e97ebdcb646b38 275 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 161 265 3.9E-27 T 23-04-2016 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|UniPathway: UPA00098 SHYC_RS01970 27bd72a51081e42364d9329a136da21d 472 Gene3D G3DSA:3.40.50.300 241 465 7.7E-99 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01970 27bd72a51081e42364d9329a136da21d 472 Gene3D G3DSA:3.40.50.300 2 225 3.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01970 27bd72a51081e42364d9329a136da21d 472 PANTHER PTHR34383 5 464 1.4E-135 T 23-04-2016 SHYC_RS01970 27bd72a51081e42364d9329a136da21d 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 243 463 2.2E-81 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related SHYC_RS01970 27bd72a51081e42364d9329a136da21d 472 Pfam PF03976 Polyphosphate kinase 2 (PPK2) 3 165 4.9E-27 T 23-04-2016 IPR022488 Polyphosphate kinase-2-related SHYC_RS01970 27bd72a51081e42364d9329a136da21d 472 SUPERFAMILY SSF52540 273 465 1.12E-26 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01970 27bd72a51081e42364d9329a136da21d 472 PANTHER PTHR34383:SF3 5 464 1.4E-135 T 23-04-2016 SHYC_RS01970 27bd72a51081e42364d9329a136da21d 472 SUPERFAMILY SSF52540 25 197 1.76E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04905 60444d3012d925f50fe7f6288d8e1d37 346 Gene3D G3DSA:1.10.443.10 129 291 6.5E-17 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS04905 60444d3012d925f50fe7f6288d8e1d37 346 Gene3D G3DSA:1.10.150.130 21 105 5.4E-8 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal SHYC_RS04905 60444d3012d925f50fe7f6288d8e1d37 346 Pfam PF00589 Phage integrase family 129 294 1.5E-9 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS04905 60444d3012d925f50fe7f6288d8e1d37 346 PANTHER PTHR30349 12 322 2.7E-13 T 23-04-2016 SHYC_RS04905 60444d3012d925f50fe7f6288d8e1d37 346 SUPERFAMILY SSF56349 59 291 3.53E-24 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHYC_RS04905 60444d3012d925f50fe7f6288d8e1d37 346 PANTHER PTHR30349:SF5 12 322 2.7E-13 T 23-04-2016 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 SUPERFAMILY SSF55681 4 375 4.98E-125 T 23-04-2016 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 Gene3D G3DSA:3.40.50.800 368 461 3.2E-38 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 326 338 5.4E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 202 219 5.4E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 24 38 5.4E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 149 161 5.4E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 170 187 5.4E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 219 229 5.4E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 PRINTS PR01043 Glycyl-tRNA synthetase signature 407 426 5.4E-53 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 PANTHER PTHR10745 4 461 5.6E-215 T 23-04-2016 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 KEGG: 00970+6.1.1.14 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 164 287 5.3E-10 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 Hamap MF_00253_B Glycine--tRNA ligase [glyQS]. 2 462 51.224 T 23-04-2016 IPR022961 Glycine-tRNA ligase, bacterial GO:0004820 KEGG: 00970+6.1.1.14 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 Gene3D G3DSA:3.30.930.10 6 90 6.5E-148 T 23-04-2016 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 Gene3D G3DSA:3.30.930.10 135 367 6.5E-148 T 23-04-2016 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 SUPERFAMILY SSF52954 359 462 6.49E-35 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 TIGRFAM TIGR00389 glyS_dimeric: glycine--tRNA ligase 4 245 2.1E-87 T 23-04-2016 IPR002315 Glycyl-tRNA synthetase GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 SHYC_RS06515 556d57a69351d58fb2c576bc7c11f25d 463 Pfam PF03129 Anticodon binding domain 372 459 3.5E-24 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS11340 96a1fe45d784958ef9a7a1e3f69482bf 396 PANTHER PTHR23531:SF1 1 384 2.7E-93 T 23-04-2016 SHYC_RS11340 96a1fe45d784958ef9a7a1e3f69482bf 396 PANTHER PTHR23531 1 384 2.7E-93 T 23-04-2016 SHYC_RS11340 96a1fe45d784958ef9a7a1e3f69482bf 396 SUPERFAMILY SSF103473 8 387 9.42E-42 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS11340 96a1fe45d784958ef9a7a1e3f69482bf 396 Pfam PF07690 Major Facilitator Superfamily 13 333 1.2E-29 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS11340 96a1fe45d784958ef9a7a1e3f69482bf 396 Gene3D G3DSA:1.20.1250.20 8 181 2.8E-24 T 23-04-2016 SHYC_RS11340 96a1fe45d784958ef9a7a1e3f69482bf 396 Gene3D G3DSA:1.20.1250.20 215 386 3.4E-12 T 23-04-2016 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 129 5.6E-28 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 PIRSF PIRSF000188 1 353 3.4E-157 T 23-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 Gene3D G3DSA:3.40.50.720 147 335 1.7E-57 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 SUPERFAMILY SSF53223 3 143 3.2E-48 T 23-04-2016 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 PANTHER PTHR11606:SF3 1 349 5.6E-138 T 23-04-2016 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 SUPERFAMILY SSF51735 140 349 1.76E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 PANTHER PTHR11606 1 349 5.6E-138 T 23-04-2016 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 65 79 4.0E-20 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 175 195 4.0E-20 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 131 153 4.0E-20 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 4.0E-20 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 218 324 1.1E-8 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 146 199 3.5E-8 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 Gene3D G3DSA:3.40.192.10 2 146 3.2E-67 T 23-04-2016 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 SMART SM00839 143 351 5.2E-62 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SHYC_RS02250 b53a39a57800dca1050693be06f0e79c 363 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 73 86 - T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 169 218 5.1E-16 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 PANTHER PTHR11451 3 645 0.0 T 23-04-2016 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 324 534 1.9E-31 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 SUPERFAMILY SSF55681 242 531 1.41E-95 T 23-04-2016 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 68 641 34.804 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 PANTHER PTHR11451:SF5 3 645 0.0 T 23-04-2016 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Pfam PF03129 Anticodon binding domain 547 632 1.5E-24 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Gene3D G3DSA:3.10.20.30 3 64 3.9E-22 T 23-04-2016 IPR012675 Beta-grasp domain SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Gene3D G3DSA:3.30.980.10 187 222 5.4E-40 T 23-04-2016 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Gene3D G3DSA:3.30.980.10 68 131 5.4E-40 T 23-04-2016 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Gene3D G3DSA:3.40.50.800 537 640 3.9E-35 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 SUPERFAMILY SSF81271 4 63 5.01E-16 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Pfam PF02824 TGS domain 6 63 5.2E-12 T 23-04-2016 IPR004095 TGS KEGG: 00970+6.1.1.3 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 SUPERFAMILY SSF52954 536 639 4.68E-33 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Gene3D G3DSA:3.30.54.20 132 186 4.2E-23 T 23-04-2016 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 SMART SM00863 169 218 2.6E-24 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 74 637 4.6E-236 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 SUPERFAMILY SSF55186 66 240 6.02E-68 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 Gene3D G3DSA:3.30.930.10 241 534 3.0E-102 T 23-04-2016 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 364 387 1.3E-45 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 513 526 1.3E-45 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 540 552 1.3E-45 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 470 498 1.3E-45 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHYC_RS06010 b8abda26ace386e24846d6ee40ef1803 645 PRINTS PR01047 Threonyl-tRNA synthetase signature 331 359 1.3E-45 T 23-04-2016 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 SHYC_RS11570 480b285a6a2acd779be2112f0253e109 385 PANTHER PTHR33567:SF3 4 385 6.6E-116 T 23-04-2016 SHYC_RS11570 480b285a6a2acd779be2112f0253e109 385 TIGRFAM TIGR00937 2A51: chromate efflux transporter 11 381 4.8E-107 T 23-04-2016 IPR014047 Chromate transporter, long chain SHYC_RS11570 480b285a6a2acd779be2112f0253e109 385 PANTHER PTHR33567 4 385 6.6E-116 T 23-04-2016 SHYC_RS11570 480b285a6a2acd779be2112f0253e109 385 PIRSF PIRSF004810 1 385 1.2E-115 T 23-04-2016 IPR014047 Chromate transporter, long chain SHYC_RS11570 480b285a6a2acd779be2112f0253e109 385 Pfam PF02417 Chromate transporter 5 168 5.7E-33 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 SHYC_RS11570 480b285a6a2acd779be2112f0253e109 385 Pfam PF02417 Chromate transporter 220 381 1.5E-36 T 23-04-2016 IPR003370 Chromate transporter GO:0015109|GO:0015703 SHYC_RS04430 8497c39813a68b5e39460502292d7602 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 277 2.6E-42 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHYC_RS04430 8497c39813a68b5e39460502292d7602 316 Gene3D G3DSA:3.40.50.720 107 278 2.8E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS04430 8497c39813a68b5e39460502292d7602 316 SUPERFAMILY SSF51735 100 277 3.18E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS04430 8497c39813a68b5e39460502292d7602 316 PANTHER PTHR10996 1 313 5.7E-101 T 23-04-2016 SHYC_RS04430 8497c39813a68b5e39460502292d7602 316 SUPERFAMILY SSF52283 29 125 3.83E-12 T 23-04-2016 SHYC_RS04430 8497c39813a68b5e39460502292d7602 316 PANTHER PTHR10996:SF168 1 313 5.7E-101 T 23-04-2016 SHYC_RS04430 8497c39813a68b5e39460502292d7602 316 Gene3D G3DSA:3.40.50.720 13 106 4.4E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS04430 8497c39813a68b5e39460502292d7602 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 17 305 1.5E-10 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 SUPERFAMILY SSF48168 10 167 7.32E-41 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 Pfam PF02867 Ribonucleotide reductase, barrel domain 169 685 4.5E-136 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 Gene3D G3DSA:3.20.70.20 343 508 2.1E-46 T 23-04-2016 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 Gene3D G3DSA:3.20.70.20 91 290 2.1E-46 T 23-04-2016 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 Gene3D G3DSA:3.20.70.20 570 684 2.1E-46 T 23-04-2016 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 SUPERFAMILY SSF51998 168 688 3.97E-171 T 23-04-2016 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 PANTHER PTHR11573 27 698 1.1E-223 T 23-04-2016 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 559 581 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 10 701 0.0 T 23-04-2016 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 PRINTS PR01183 Ribonucleotide reductase large chain signature 488 511 5.9E-28 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 PRINTS PR01183 Ribonucleotide reductase large chain signature 244 263 5.9E-28 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 PRINTS PR01183 Ribonucleotide reductase large chain signature 377 388 5.9E-28 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 PRINTS PR01183 Ribonucleotide reductase large chain signature 460 482 5.9E-28 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 PRINTS PR01183 Ribonucleotide reductase large chain signature 570 597 5.9E-28 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 Pfam PF08343 Ribonucleotide reductase N-terminal 11 90 8.9E-19 T 23-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 93 164 3.0E-12 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS09815 32bc5af949b5558abe766bb0faddb5ef 701 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 95 688 6.4E-161 T 23-04-2016 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS10555 c90b19b6a3b9595bef616bd4e1abfd70 269 PANTHER PTHR30514:SF1 1 247 5.4E-49 T 23-04-2016 SHYC_RS10555 c90b19b6a3b9595bef616bd4e1abfd70 269 PANTHER PTHR30514 1 247 5.4E-49 T 23-04-2016 SHYC_RS10555 c90b19b6a3b9595bef616bd4e1abfd70 269 Pfam PF01380 SIS domain 115 240 5.4E-15 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SHYC_RS10555 c90b19b6a3b9595bef616bd4e1abfd70 269 Gene3D G3DSA:1.10.10.10 1 64 3.1E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10555 c90b19b6a3b9595bef616bd4e1abfd70 269 SUPERFAMILY SSF53697 85 247 8.64E-30 T 23-04-2016 SHYC_RS10555 c90b19b6a3b9595bef616bd4e1abfd70 269 Gene3D G3DSA:3.40.50.10490 65 247 2.2E-30 T 23-04-2016 SHYC_RS10555 c90b19b6a3b9595bef616bd4e1abfd70 269 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 2.7E-13 T 23-04-2016 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 SHYC_RS10555 c90b19b6a3b9595bef616bd4e1abfd70 269 SUPERFAMILY SSF46689 1 77 3.4E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS00985 ff171b3baf5bcf193014575ffd1e5bb8 337 Gene3D G3DSA:3.40.1190.20 1 328 4.7E-68 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS00985 ff171b3baf5bcf193014575ffd1e5bb8 337 SUPERFAMILY SSF53613 1 327 1.43E-64 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS00985 ff171b3baf5bcf193014575ffd1e5bb8 337 PANTHER PTHR10584:SF203 1 317 5.4E-76 T 23-04-2016 SHYC_RS00985 ff171b3baf5bcf193014575ffd1e5bb8 337 Pfam PF00294 pfkB family carbohydrate kinase 3 193 4.5E-20 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB SHYC_RS00985 ff171b3baf5bcf193014575ffd1e5bb8 337 PANTHER PTHR10584 1 317 5.4E-76 T 23-04-2016 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 Pfam PF13180 PDZ domain 461 534 1.1E-11 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 SUPERFAMILY SSF50494 215 433 1.04E-43 T 23-04-2016 IPR009003 Peptidase S1, PA clan SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 SMART SM00228 440 526 6.2E-8 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 Gene3D G3DSA:2.40.10.10 329 438 2.6E-29 T 23-04-2016 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 Gene3D G3DSA:2.40.10.10 243 328 2.5E-22 T 23-04-2016 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 Gene3D G3DSA:2.30.42.10 447 534 3.7E-17 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 Pfam PF13365 Trypsin-like peptidase domain 251 400 2.6E-26 T 23-04-2016 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 PANTHER PTHR22939:SF79 166 536 1.9E-81 T 23-04-2016 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 SUPERFAMILY SSF50156 424 534 4.73E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 PANTHER PTHR22939 166 536 1.9E-81 T 23-04-2016 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 PRINTS PR00834 HtrA/DegQ protease family signature 284 304 1.8E-23 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 PRINTS PR00834 HtrA/DegQ protease family signature 371 388 1.8E-23 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 PRINTS PR00834 HtrA/DegQ protease family signature 483 495 1.8E-23 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 PRINTS PR00834 HtrA/DegQ protease family signature 263 275 1.8E-23 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 PRINTS PR00834 HtrA/DegQ protease family signature 327 351 1.8E-23 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS08990 37926455770e37e75bac1ef18d624a93 536 PRINTS PR00834 HtrA/DegQ protease family signature 393 410 1.8E-23 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS07770 d621939c9fc9ed66d3d88e45cdb8917b 427 SUPERFAMILY SSF63411 7 223 1.13E-37 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHYC_RS07770 d621939c9fc9ed66d3d88e45cdb8917b 427 Gene3D G3DSA:3.30.830.10 318 415 1.4E-5 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SHYC_RS07770 d621939c9fc9ed66d3d88e45cdb8917b 427 PANTHER PTHR11851:SF134 5 426 5.9E-173 T 23-04-2016 SHYC_RS07770 d621939c9fc9ed66d3d88e45cdb8917b 427 SUPERFAMILY SSF63411 254 416 1.05E-10 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHYC_RS07770 d621939c9fc9ed66d3d88e45cdb8917b 427 Pfam PF00675 Insulinase (Peptidase family M16) 64 164 4.8E-13 T 23-04-2016 IPR011765 Peptidase M16, N-terminal SHYC_RS07770 d621939c9fc9ed66d3d88e45cdb8917b 427 PANTHER PTHR11851 5 426 5.9E-173 T 23-04-2016 SHYC_RS07770 d621939c9fc9ed66d3d88e45cdb8917b 427 Gene3D G3DSA:3.30.830.10 10 236 1.3E-38 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SHYC_RS07770 d621939c9fc9ed66d3d88e45cdb8917b 427 Pfam PF05193 Peptidase M16 inactive domain 181 345 2.5E-15 T 23-04-2016 IPR007863 Peptidase M16, C-terminal SHYC_RS10015 31871a4f2b64151e54d44cb0beadfb84 145 PANTHER PTHR33164:SF5 1 143 9.9E-48 T 23-04-2016 SHYC_RS10015 31871a4f2b64151e54d44cb0beadfb84 145 SMART SM00347 29 127 5.6E-21 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS10015 31871a4f2b64151e54d44cb0beadfb84 145 PANTHER PTHR33164 1 143 9.9E-48 T 23-04-2016 SHYC_RS10015 31871a4f2b64151e54d44cb0beadfb84 145 Pfam PF01047 MarR family 36 94 2.3E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS10015 31871a4f2b64151e54d44cb0beadfb84 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SHYC_RS10015 31871a4f2b64151e54d44cb0beadfb84 145 Gene3D G3DSA:1.10.10.10 2 143 1.5E-38 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10015 31871a4f2b64151e54d44cb0beadfb84 145 SUPERFAMILY SSF46785 6 138 2.05E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS04155 f290b4b834c31e48c870ae5f77eec2a6 263 Gene3D G3DSA:3.40.190.10 88 163 1.5E-22 T 23-04-2016 SHYC_RS04155 f290b4b834c31e48c870ae5f77eec2a6 263 Gene3D G3DSA:3.30.70.260 186 260 7.3E-19 T 23-04-2016 SHYC_RS04155 f290b4b834c31e48c870ae5f77eec2a6 263 Gene3D G3DSA:3.40.190.10 2 87 2.1E-22 T 23-04-2016 SHYC_RS04155 f290b4b834c31e48c870ae5f77eec2a6 263 PANTHER PTHR21022 5 262 7.2E-68 T 23-04-2016 SHYC_RS04155 f290b4b834c31e48c870ae5f77eec2a6 263 PANTHER PTHR21022:SF0 5 262 7.2E-68 T 23-04-2016 SHYC_RS04155 f290b4b834c31e48c870ae5f77eec2a6 263 Pfam PF00800 Prephenate dehydratase 4 175 6.2E-43 T 23-04-2016 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432|UniPathway: UPA00121 SHYC_RS04155 f290b4b834c31e48c870ae5f77eec2a6 263 SUPERFAMILY SSF55021 169 262 4.93E-19 T 23-04-2016 SHYC_RS04155 f290b4b834c31e48c870ae5f77eec2a6 263 SUPERFAMILY SSF53850 2 181 3.26E-48 T 23-04-2016 SHYC_RS05985 8041c2f86d0757fb9d95330cfbfa036a 202 SUPERFAMILY SSF52540 1 192 1.95E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05985 8041c2f86d0757fb9d95330cfbfa036a 202 PANTHER PTHR10695 4 194 2.5E-72 T 23-04-2016 SHYC_RS05985 8041c2f86d0757fb9d95330cfbfa036a 202 Gene3D G3DSA:3.40.50.300 1 194 1.2E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05985 8041c2f86d0757fb9d95330cfbfa036a 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 189 1.0E-56 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SHYC_RS05985 8041c2f86d0757fb9d95330cfbfa036a 202 Pfam PF01121 Dephospho-CoA kinase 4 179 2.4E-56 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SHYC_RS05985 8041c2f86d0757fb9d95330cfbfa036a 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 198 26.553 T 23-04-2016 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|UniPathway: UPA00241 SHYC_RS02815 725ead726eba81b64e2e1f0f5f2de87e 260 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 115 241 6.3E-15 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHYC_RS02815 725ead726eba81b64e2e1f0f5f2de87e 260 PANTHER PTHR33308:SF4 87 258 6.6E-49 T 23-04-2016 SHYC_RS02815 725ead726eba81b64e2e1f0f5f2de87e 260 SMART SM00047 102 250 4.0E-36 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHYC_RS02815 725ead726eba81b64e2e1f0f5f2de87e 260 PANTHER PTHR33308 87 258 6.6E-49 T 23-04-2016 SHYC_RS01495 aba74f3d7ded9d54c7b7cd64bc485e47 150 PRINTS PR01759 Capsule biosynthesis protein CapC signature 88 101 2.7E-34 T 23-04-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 SHYC_RS01495 aba74f3d7ded9d54c7b7cd64bc485e47 150 PRINTS PR01759 Capsule biosynthesis protein CapC signature 20 37 2.7E-34 T 23-04-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 SHYC_RS01495 aba74f3d7ded9d54c7b7cd64bc485e47 150 PRINTS PR01759 Capsule biosynthesis protein CapC signature 118 132 2.7E-34 T 23-04-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 SHYC_RS01495 aba74f3d7ded9d54c7b7cd64bc485e47 150 PRINTS PR01759 Capsule biosynthesis protein CapC signature 2 17 2.7E-34 T 23-04-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 SHYC_RS01495 aba74f3d7ded9d54c7b7cd64bc485e47 150 PRINTS PR01759 Capsule biosynthesis protein CapC signature 66 80 2.7E-34 T 23-04-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 SHYC_RS01495 aba74f3d7ded9d54c7b7cd64bc485e47 150 TIGRFAM TIGR04011 poly_gGlu_PgsC: poly-gamma-glutamate biosynthesis protein PgsC 11 140 1.2E-41 T 23-04-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 SHYC_RS01495 aba74f3d7ded9d54c7b7cd64bc485e47 150 Pfam PF14102 Capsule biosynthesis CapC 12 129 2.5E-38 T 23-04-2016 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 SHYC_RS02670 a98f88a87693cb184a37b813ef8c6223 216 Pfam PF03475 3-alpha domain 173 213 3.5E-5 T 23-04-2016 IPR005163 3-alpha domain SHYC_RS02670 a98f88a87693cb184a37b813ef8c6223 216 PANTHER PTHR30212:SF2 1 214 1.1E-47 T 23-04-2016 SHYC_RS02670 a98f88a87693cb184a37b813ef8c6223 216 Pfam PF03473 MOSC domain 52 156 2.3E-14 T 23-04-2016 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 SHYC_RS02670 a98f88a87693cb184a37b813ef8c6223 216 PANTHER PTHR30212 1 214 1.1E-47 T 23-04-2016 SHYC_RS02670 a98f88a87693cb184a37b813ef8c6223 216 SUPERFAMILY SSF50800 3 214 2.09E-58 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain SHYC_RS02670 a98f88a87693cb184a37b813ef8c6223 216 Gene3D G3DSA:2.40.33.20 3 214 8.0E-63 T 23-04-2016 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 1.5E-34 T 23-04-2016 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 PANTHER PTHR13691 1 276 5.2E-154 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 Gene3D G3DSA:2.40.50.140 1 114 1.2E-53 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 PIRSF PIRSF002158 4 276 6.8E-101 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 SUPERFAMILY SSF50249 2 125 4.46E-51 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 5.3E-56 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 49.083 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 Gene3D G3DSA:4.10.950.10 196 275 6.4E-34 T 23-04-2016 IPR014726 Ribosomal protein L2, domain 3 SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 SMART SM01382 124 253 5.9E-93 T 23-04-2016 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 276 1.6E-137 T 23-04-2016 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 23-04-2016 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 SUPERFAMILY SSF50104 126 273 8.42E-60 T 23-04-2016 IPR008991 Translation protein SH3-like domain SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 SMART SM01383 42 118 4.5E-47 T 23-04-2016 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03075 b93e8afb469f00cdae1a08ae44e0fff9 277 Gene3D G3DSA:2.30.30.30 118 195 1.2E-35 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 Pfam PF02978 Signal peptide binding domain 329 427 7.6E-35 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 PANTHER PTHR11564:SF7 1 434 1.2E-267 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 SUPERFAMILY SSF52540 43 355 3.45E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 3.8E-188 T 23-04-2016 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 SMART SM00962 101 297 2.2E-115 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 SMART SM00382 100 247 1.7E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 SUPERFAMILY SSF47446 329 430 1.96E-38 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 Gene3D G3DSA:3.40.50.300 96 298 4.0E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 SMART SM00963 2 87 3.4E-31 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 Gene3D G3DSA:1.10.260.30 328 431 3.1E-41 T 23-04-2016 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 448 35.208 T 23-04-2016 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 Gene3D G3DSA:1.20.120.140 3 90 3.7E-35 T 23-04-2016 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 1.9E-21 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 PANTHER PTHR11564 1 434 1.2E-267 T 23-04-2016 SHYC_RS08005 463de793dd0c38c33914ab2868d1d83b 455 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 1.6E-76 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 SUPERFAMILY SSF51161 255 439 1.14E-45 T 23-04-2016 IPR011004 Trimeric LpxA-like SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 452 40.678 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 PANTHER PTHR22572 4 449 1.5E-212 T 23-04-2016 SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 Pfam PF12804 MobA-like NTP transferase domain 5 139 2.6E-21 T 23-04-2016 IPR025877 MobA-like NTP transferase SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 PANTHER PTHR22572:SF115 4 449 1.5E-212 T 23-04-2016 SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 Gene3D G3DSA:2.160.10.10 247 323 4.4E-17 T 23-04-2016 SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 SUPERFAMILY SSF53448 4 253 4.51E-59 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 453 1.2E-173 T 23-04-2016 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|UniPathway: UPA00113|UniPathway: UPA00113|UniPathway: UPA00973 SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 428 8.2E-7 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 317 352 4.4E-5 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 260 282 1.7E-4 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 Gene3D G3DSA:2.160.10.10 324 450 1.7E-32 T 23-04-2016 SHYC_RS10975 d784ee5e2fce05dc35301890a194ce9a 454 Gene3D G3DSA:3.90.550.10 1 246 2.6E-72 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS02830 acf59baef3385068b5b4c5eb9effbf21 189 Pfam PF05257 CHAP domain 84 162 2.3E-15 T 23-04-2016 IPR007921 CHAP domain SHYC_RS02830 acf59baef3385068b5b4c5eb9effbf21 189 SUPERFAMILY SSF54001 50 187 2.55E-23 T 23-04-2016 SHYC_RS02830 acf59baef3385068b5b4c5eb9effbf21 189 PANTHER PTHR33308:SF2 83 188 6.8E-30 T 23-04-2016 SHYC_RS02830 acf59baef3385068b5b4c5eb9effbf21 189 PANTHER PTHR33308 83 188 6.8E-30 T 23-04-2016 SHYC_RS00905 5d7da69aaeab04451f7177af95bb4fea 249 Pfam PF00005 ABC transporter 22 170 2.5E-37 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS00905 5d7da69aaeab04451f7177af95bb4fea 249 Gene3D G3DSA:3.40.50.300 2 220 6.4E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00905 5d7da69aaeab04451f7177af95bb4fea 249 SUPERFAMILY SSF52540 2 222 5.2E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00905 5d7da69aaeab04451f7177af95bb4fea 249 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS00905 5d7da69aaeab04451f7177af95bb4fea 249 PANTHER PTHR24220 4 239 3.5E-124 T 23-04-2016 SHYC_RS00905 5d7da69aaeab04451f7177af95bb4fea 249 PANTHER PTHR24220:SF494 4 239 3.5E-124 T 23-04-2016 SHYC_RS00905 5d7da69aaeab04451f7177af95bb4fea 249 SMART SM00382 31 218 2.2E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 PANTHER PTHR24423 351 577 1.1E-77 T 23-04-2016 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 PANTHER PTHR24423 91 241 1.1E-77 T 23-04-2016 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 PANTHER PTHR24423 9 17 1.1E-77 T 23-04-2016 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 9.4E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 9.4E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 9.4E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 9.4E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 SUPERFAMILY SSF55874 409 577 3.8E-45 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 Gene3D G3DSA:3.30.565.10 408 577 1.5E-46 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 469 577 1.2E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 SMART SM00387 467 578 2.8E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 SUPERFAMILY SSF158472 192 242 2.22E-11 T 23-04-2016 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 SMART SM00304 191 243 2.8E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 SMART SM00388 353 420 7.5E-19 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 Pfam PF00672 HAMP domain 172 239 5.8E-18 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 Gene3D G3DSA:1.10.287.130 345 407 1.6E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 SUPERFAMILY SSF47384 340 420 3.73E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS06905 69f368d8f9f31ba6d3760b7547bfe05f 578 Pfam PF00512 His Kinase A (phospho-acceptor) domain 354 419 1.7E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS05140 f4fdd3971b2b40c95eeaaef2a7efde9e 429 SUPERFAMILY SSF56091 155 335 1.3E-23 T 23-04-2016 SHYC_RS05140 f4fdd3971b2b40c95eeaaef2a7efde9e 429 Pfam PF01068 ATP dependent DNA ligase domain 152 335 2.9E-14 T 23-04-2016 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 Reactome: REACT_216 SHYC_RS05140 f4fdd3971b2b40c95eeaaef2a7efde9e 429 Gene3D G3DSA:2.40.50.140 309 424 1.7E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS05140 f4fdd3971b2b40c95eeaaef2a7efde9e 429 Gene3D G3DSA:3.30.470.30 163 279 2.9E-6 T 23-04-2016 SHYC_RS05140 f4fdd3971b2b40c95eeaaef2a7efde9e 429 SUPERFAMILY SSF50249 309 420 3.43E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS05140 f4fdd3971b2b40c95eeaaef2a7efde9e 429 Pfam PF14743 DNA ligase OB-like domain 354 420 8.6E-12 T 23-04-2016 IPR029319 DNA ligase, OB-like domain SHYC_RS10610 98f44724e3dcf380c4a75de6bfba4667 358 Gene3D G3DSA:3.30.470.10 4 175 1.2E-63 T 23-04-2016 SHYC_RS10610 98f44724e3dcf380c4a75de6bfba4667 358 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 43 354 3.5E-120 T 23-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 SHYC_RS10610 98f44724e3dcf380c4a75de6bfba4667 358 PANTHER PTHR11825 4 354 9.7E-142 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SHYC_RS10610 98f44724e3dcf380c4a75de6bfba4667 358 SUPERFAMILY SSF56752 7 352 6.15E-114 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SHYC_RS10610 98f44724e3dcf380c4a75de6bfba4667 358 PIRSF PIRSF006468 1 357 1.8E-127 T 23-04-2016 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|Reactome: REACT_13 SHYC_RS10610 98f44724e3dcf380c4a75de6bfba4667 358 Gene3D G3DSA:3.20.10.10 176 341 1.1E-65 T 23-04-2016 SHYC_RS10610 98f44724e3dcf380c4a75de6bfba4667 358 ProSitePatterns PS00770 Aminotransferases class-IV signature. 232 261 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SHYC_RS10610 98f44724e3dcf380c4a75de6bfba4667 358 Pfam PF01063 Amino-transferase class IV 69 311 4.8E-37 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SHYC_RS10610 98f44724e3dcf380c4a75de6bfba4667 358 PANTHER PTHR11825:SF2 4 354 9.7E-142 T 23-04-2016 SHYC_RS08425 ea6b734ba4d33840af0b6048e694b150 312 PANTHER PTHR10954:SF12 12 309 5.2E-88 T 23-04-2016 SHYC_RS08425 ea6b734ba4d33840af0b6048e694b150 312 Pfam PF11858 Domain of unknown function (DUF3378) 3 75 4.2E-16 T 23-04-2016 IPR024568 Ribonuclease HIII, N-terminal SHYC_RS08425 ea6b734ba4d33840af0b6048e694b150 312 Pfam PF01351 Ribonuclease HII 93 296 1.0E-39 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain SHYC_RS08425 ea6b734ba4d33840af0b6048e694b150 312 SUPERFAMILY SSF53098 92 304 3.49E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS08425 ea6b734ba4d33840af0b6048e694b150 312 PANTHER PTHR10954 12 309 5.2E-88 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SHYC_RS08425 ea6b734ba4d33840af0b6048e694b150 312 PIRSF PIRSF037748 1 305 3.2E-106 T 23-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SHYC_RS08425 ea6b734ba4d33840af0b6048e694b150 312 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 304 27.788 T 23-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SHYC_RS08425 ea6b734ba4d33840af0b6048e694b150 312 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 10 296 5.3E-70 T 23-04-2016 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 SHYC_RS08425 ea6b734ba4d33840af0b6048e694b150 312 Gene3D G3DSA:3.30.420.10 92 255 2.4E-36 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS06760 685caab2a9c226bac136353de922fc46 74 Gene3D G3DSA:1.10.287.1040 3 66 1.6E-24 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHYC_RS06760 685caab2a9c226bac136353de922fc46 74 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 7 63 3.1E-24 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHYC_RS06760 685caab2a9c226bac136353de922fc46 74 PIRSF PIRSF006488 1 74 7.2E-23 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHYC_RS06760 685caab2a9c226bac136353de922fc46 74 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 6 49 3.0E-11 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHYC_RS06760 685caab2a9c226bac136353de922fc46 74 PANTHER PTHR34137 1 65 7.9E-20 T 23-04-2016 SHYC_RS06760 685caab2a9c226bac136353de922fc46 74 SUPERFAMILY SSF116842 2 65 1.83E-21 T 23-04-2016 SHYC_RS06760 685caab2a9c226bac136353de922fc46 74 Pfam PF02609 Exonuclease VII small subunit 8 59 2.3E-21 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHYC_RS06760 685caab2a9c226bac136353de922fc46 74 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 7 67 15.385 T 23-04-2016 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 SHYC_RS10530 f721952a7f8920bf6a57e35ed418cb24 181 PANTHER PTHR10937 9 173 3.4E-53 T 23-04-2016 SHYC_RS10530 f721952a7f8920bf6a57e35ed418cb24 181 Gene3D G3DSA:3.40.50.10490 8 180 1.8E-41 T 23-04-2016 SHYC_RS10530 f721952a7f8920bf6a57e35ed418cb24 181 PANTHER PTHR10937:SF14 9 173 3.4E-53 T 23-04-2016 SHYC_RS10530 f721952a7f8920bf6a57e35ed418cb24 181 TIGRFAM TIGR03127 RuMP_HxlB: 6-phospho 3-hexuloisomerase 7 181 1.7E-66 T 23-04-2016 IPR017552 3-hexulose-6-phosphate isomerase GO:0016853 SHYC_RS10530 f721952a7f8920bf6a57e35ed418cb24 181 Pfam PF01380 SIS domain 33 154 9.5E-19 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SHYC_RS10530 f721952a7f8920bf6a57e35ed418cb24 181 SUPERFAMILY SSF53697 7 180 1.29E-34 T 23-04-2016 SHYC_RS05585 f65bffa956e8b2b699afb41081fc00ae 556 PANTHER PTHR40254 1 508 2.6E-78 T 23-04-2016 SHYC_RS05585 f65bffa956e8b2b699afb41081fc00ae 556 Gene3D G3DSA:3.50.50.60 348 490 1.8E-8 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05585 f65bffa956e8b2b699afb41081fc00ae 556 Gene3D G3DSA:3.50.50.60 1 45 1.1E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05585 f65bffa956e8b2b699afb41081fc00ae 556 Gene3D G3DSA:3.50.50.60 88 229 1.1E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05585 f65bffa956e8b2b699afb41081fc00ae 556 Pfam PF13454 FAD-NAD(P)-binding 4 159 3.3E-25 T 23-04-2016 SHYC_RS05585 f65bffa956e8b2b699afb41081fc00ae 556 SUPERFAMILY SSF51905 350 411 4.83E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05585 f65bffa956e8b2b699afb41081fc00ae 556 SUPERFAMILY SSF51905 82 234 4.83E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05585 f65bffa956e8b2b699afb41081fc00ae 556 SUPERFAMILY SSF51905 1 36 4.83E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05585 f65bffa956e8b2b699afb41081fc00ae 556 PANTHER PTHR40254:SF1 1 508 2.6E-78 T 23-04-2016 SHYC_RS10550 188371bd4aab609396006c7cd07f3d22 509 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 413 493 1.8E-18 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS10550 188371bd4aab609396006c7cd07f3d22 509 Gene3D G3DSA:3.30.1360.60 432 507 2.1E-27 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS10550 188371bd4aab609396006c7cd07f3d22 509 PANTHER PTHR30009:SF11 5 505 1.5E-254 T 23-04-2016 SHYC_RS10550 188371bd4aab609396006c7cd07f3d22 509 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 447 464 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SHYC_RS10550 188371bd4aab609396006c7cd07f3d22 509 PANTHER PTHR30009 5 505 1.5E-254 T 23-04-2016 SHYC_RS10550 188371bd4aab609396006c7cd07f3d22 509 SUPERFAMILY SSF55604 434 506 5.49E-22 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS10550 188371bd4aab609396006c7cd07f3d22 509 Pfam PF00367 phosphotransferase system, EIIB 437 469 1.6E-14 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SHYC_RS10550 188371bd4aab609396006c7cd07f3d22 509 Pfam PF02378 Phosphotransferase system, EIIC 12 351 1.5E-93 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS08440 5a028ee2a6d018e836ed8e1dd3e2944d 248 Gene3D G3DSA:3.30.1330.30 2 98 1.5E-23 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like SHYC_RS08440 5a028ee2a6d018e836ed8e1dd3e2944d 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 99 3.7E-8 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SHYC_RS08440 5a028ee2a6d018e836ed8e1dd3e2944d 248 Pfam PF00588 SpoU rRNA Methylase family 107 244 1.8E-36 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SHYC_RS08440 5a028ee2a6d018e836ed8e1dd3e2944d 248 Gene3D G3DSA:3.40.1280.10 105 246 2.5E-46 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHYC_RS08440 5a028ee2a6d018e836ed8e1dd3e2944d 248 SUPERFAMILY SSF55315 3 98 1.29E-21 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like SHYC_RS08440 5a028ee2a6d018e836ed8e1dd3e2944d 248 SMART SM00967 31 100 2.9E-11 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SHYC_RS08440 5a028ee2a6d018e836ed8e1dd3e2944d 248 SUPERFAMILY SSF75217 93 246 4.06E-40 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases SHYC_RS08440 5a028ee2a6d018e836ed8e1dd3e2944d 248 PANTHER PTHR12029 1 246 1.1E-62 T 23-04-2016 SHYC_RS07750 e5e26bd8cd94c796402c3801ec0ea585 194 PIRSF PIRSF000847 1 194 2.9E-51 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SHYC_RS07750 e5e26bd8cd94c796402c3801ec0ea585 194 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SHYC_RS07750 e5e26bd8cd94c796402c3801ec0ea585 194 PANTHER PTHR14269 1 184 3.8E-45 T 23-04-2016 SHYC_RS07750 e5e26bd8cd94c796402c3801ec0ea585 194 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1 186 6.1E-57 T 23-04-2016 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|UniPathway: UPA00084 SHYC_RS07750 e5e26bd8cd94c796402c3801ec0ea585 194 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 82 6.6E-16 T 23-04-2016 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 Hamap MF_00550 Peptidase T [pepT]. 2 404 53.923 T 23-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 PIRSF PIRSF037215 1 408 1.6E-181 T 23-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 Gene3D G3DSA:3.40.630.10 322 406 1.4E-111 T 23-04-2016 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 Gene3D G3DSA:3.40.630.10 2 209 1.4E-111 T 23-04-2016 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 4 407 6.1E-170 T 23-04-2016 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 Pfam PF07687 Peptidase dimerisation domain 208 301 2.7E-12 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 Gene3D G3DSA:3.30.70.360 210 319 1.7E-45 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 PANTHER PTHR11014:SF3 131 408 7.9E-176 T 23-04-2016 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 PANTHER PTHR11014:SF3 1 91 7.9E-176 T 23-04-2016 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 SUPERFAMILY SSF53187 4 210 3.67E-81 T 23-04-2016 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 SUPERFAMILY SSF53187 322 404 3.67E-81 T 23-04-2016 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 Pfam PF01546 Peptidase family M20/M25/M40 139 402 1.1E-11 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 177 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 SUPERFAMILY SSF55031 209 319 1.22E-40 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 PANTHER PTHR11014 131 408 7.9E-176 T 23-04-2016 SHYC_RS09775 602cb752e3497e5c49fa299ee1736625 408 PANTHER PTHR11014 1 91 7.9E-176 T 23-04-2016 SHYC_RS07905 ab1ef5e22f95314ae1d88ebf2702c134 257 PANTHER PTHR40062 1 257 9.0E-136 T 23-04-2016 SHYC_RS07905 ab1ef5e22f95314ae1d88ebf2702c134 257 Pfam PF08222 CodY helix-turn-helix domain 197 255 1.1E-32 T 23-04-2016 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal SHYC_RS07905 ab1ef5e22f95314ae1d88ebf2702c134 257 Pfam PF06018 CodY GAF-like domain 3 178 1.4E-69 T 23-04-2016 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 SHYC_RS07905 ab1ef5e22f95314ae1d88ebf2702c134 257 Gene3D G3DSA:1.10.10.10 190 247 1.0E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07905 ab1ef5e22f95314ae1d88ebf2702c134 257 SUPERFAMILY SSF46785 167 255 1.47E-39 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07905 ab1ef5e22f95314ae1d88ebf2702c134 257 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 7.2E-105 T 23-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 SHYC_RS07905 ab1ef5e22f95314ae1d88ebf2702c134 257 PIRSF PIRSF011572 1 257 6.1E-113 T 23-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 SHYC_RS07905 ab1ef5e22f95314ae1d88ebf2702c134 257 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 257 128.841 T 23-04-2016 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 SHYC_RS06600 b83d70f8d1cc60adf73b7ab0cbcaa121 308 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 24 304 1.1E-82 T 23-04-2016 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 SHYC_RS06600 b83d70f8d1cc60adf73b7ab0cbcaa121 308 PANTHER PTHR30425:SF3 9 308 1.7E-129 T 23-04-2016 SHYC_RS06600 b83d70f8d1cc60adf73b7ab0cbcaa121 308 Gene3D G3DSA:1.10.3720.10 28 307 6.5E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS06600 b83d70f8d1cc60adf73b7ab0cbcaa121 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 305 2.6E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS06600 b83d70f8d1cc60adf73b7ab0cbcaa121 308 PANTHER PTHR30425 9 308 1.7E-129 T 23-04-2016 SHYC_RS06600 b83d70f8d1cc60adf73b7ab0cbcaa121 308 SUPERFAMILY SSF161098 27 301 1.87E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS01370 b53e1aebb3d7ded43d2b0baf5bcac718 404 PANTHER PTHR23502 1 387 6.7E-104 T 23-04-2016 SHYC_RS01370 b53e1aebb3d7ded43d2b0baf5bcac718 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 381 6.7E-80 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 SHYC_RS01370 b53e1aebb3d7ded43d2b0baf5bcac718 404 SUPERFAMILY SSF103473 7 386 2.75E-62 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS01370 b53e1aebb3d7ded43d2b0baf5bcac718 404 Gene3D G3DSA:1.20.1250.20 210 390 1.2E-10 T 23-04-2016 SHYC_RS01370 b53e1aebb3d7ded43d2b0baf5bcac718 404 Gene3D G3DSA:1.20.1250.20 11 185 4.6E-29 T 23-04-2016 SHYC_RS01370 b53e1aebb3d7ded43d2b0baf5bcac718 404 Pfam PF07690 Major Facilitator Superfamily 17 353 1.8E-43 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS01370 b53e1aebb3d7ded43d2b0baf5bcac718 404 PANTHER PTHR23502:SF19 1 387 6.7E-104 T 23-04-2016 SHYC_RS03685 f17d9719ff64d29a2f706bd45da70a3a 134 Gene3D G3DSA:1.20.5.440 91 133 1.7E-16 T 23-04-2016 SHYC_RS03685 f17d9719ff64d29a2f706bd45da70a3a 134 PANTHER PTHR13822 1 132 1.1E-36 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03685 f17d9719ff64d29a2f706bd45da70a3a 134 Gene3D G3DSA:2.60.15.10 2 90 3.2E-28 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03685 f17d9719ff64d29a2f706bd45da70a3a 134 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 83 3.7E-26 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03685 f17d9719ff64d29a2f706bd45da70a3a 134 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 87 132 1.1E-12 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SHYC_RS03685 f17d9719ff64d29a2f706bd45da70a3a 134 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 89 3.0E-26 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03685 f17d9719ff64d29a2f706bd45da70a3a 134 SUPERFAMILY SSF51344 3 84 1.7E-22 T 23-04-2016 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03685 f17d9719ff64d29a2f706bd45da70a3a 134 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 2.4E-33 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03685 f17d9719ff64d29a2f706bd45da70a3a 134 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 130 21.723 T 23-04-2016 IPR001469 ATPase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03685 f17d9719ff64d29a2f706bd45da70a3a 134 SUPERFAMILY SSF46604 87 132 3.4E-6 T 23-04-2016 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain SHYC_RS10620 9b5df2b68e9e0007374fafac27953769 396 Pfam PF00155 Aminotransferase class I and II 42 383 1.5E-68 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHYC_RS10620 9b5df2b68e9e0007374fafac27953769 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 240 249 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SHYC_RS10620 9b5df2b68e9e0007374fafac27953769 396 PANTHER PTHR13693:SF53 1 396 2.5E-199 T 23-04-2016 SHYC_RS10620 9b5df2b68e9e0007374fafac27953769 396 Gene3D G3DSA:3.90.1150.10 278 391 2.8E-29 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS10620 9b5df2b68e9e0007374fafac27953769 396 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 9 395 2.8E-202 T 23-04-2016 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type SHYC_RS10620 9b5df2b68e9e0007374fafac27953769 396 SUPERFAMILY SSF53383 4 394 2.2E-110 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS10620 9b5df2b68e9e0007374fafac27953769 396 Gene3D G3DSA:3.40.640.10 61 277 3.0E-86 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS10620 9b5df2b68e9e0007374fafac27953769 396 PANTHER PTHR13693 1 396 2.5E-199 T 23-04-2016 SHYC_RS09565 99a9a918dc4b210557401f4b90f737ac 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 23-04-2016 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SHYC_RS09565 99a9a918dc4b210557401f4b90f737ac 253 Gene3D G3DSA:3.20.20.70 2 250 5.6E-102 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS09565 99a9a918dc4b210557401f4b90f737ac 253 Pfam PF00121 Triosephosphate isomerase 5 248 1.5E-91 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SHYC_RS09565 99a9a918dc4b210557401f4b90f737ac 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 243 8.0E-56 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SHYC_RS09565 99a9a918dc4b210557401f4b90f737ac 253 PANTHER PTHR21139 2 244 1.8E-116 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SHYC_RS09565 99a9a918dc4b210557401f4b90f737ac 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 252 40.475 T 23-04-2016 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SHYC_RS09565 99a9a918dc4b210557401f4b90f737ac 253 SUPERFAMILY SSF51351 2 250 9.29E-90 T 23-04-2016 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|UniPathway: UPA00109|UniPathway: UPA00138 SHYC_RS08725 ec8fe9b1c3d8e8c3f31718504303172f 342 SUPERFAMILY SSF55326 4 166 4.78E-48 T 23-04-2016 SHYC_RS08725 ec8fe9b1c3d8e8c3f31718504303172f 342 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 342 44.52 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08725 ec8fe9b1c3d8e8c3f31718504303172f 342 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 332 1.7E-128 T 23-04-2016 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08725 ec8fe9b1c3d8e8c3f31718504303172f 342 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 334 1.6E-32 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHYC_RS08725 ec8fe9b1c3d8e8c3f31718504303172f 342 SUPERFAMILY SSF56042 168 335 3.59E-55 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHYC_RS08725 ec8fe9b1c3d8e8c3f31718504303172f 342 Gene3D G3DSA:3.30.1330.10 19 166 6.7E-59 T 23-04-2016 IPR016188 PurM-like, N-terminal domain SHYC_RS08725 ec8fe9b1c3d8e8c3f31718504303172f 342 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 161 6.7E-16 T 23-04-2016 IPR016188 PurM-like, N-terminal domain SHYC_RS08725 ec8fe9b1c3d8e8c3f31718504303172f 342 Gene3D G3DSA:3.90.650.10 168 335 1.0E-61 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHYC_RS08725 ec8fe9b1c3d8e8c3f31718504303172f 342 PANTHER PTHR10520 4 330 4.4E-185 T 23-04-2016 SHYC_RS10760 02fbca49964ada1bf19f75937015cfbc 335 Hamap MF_00602 Protein-arginine kinase [mcsB]. 12 335 32.463 T 23-04-2016 IPR023660 Arginine kinase GO:0016775 SHYC_RS10760 02fbca49964ada1bf19f75937015cfbc 335 PANTHER PTHR11547 22 246 3.4E-86 T 23-04-2016 IPR000749 ATP:guanido phosphotransferase GO:0016772 Reactome: REACT_13 SHYC_RS10760 02fbca49964ada1bf19f75937015cfbc 335 PANTHER PTHR11547 298 335 3.4E-86 T 23-04-2016 IPR000749 ATP:guanido phosphotransferase GO:0016772 Reactome: REACT_13 SHYC_RS10760 02fbca49964ada1bf19f75937015cfbc 335 PANTHER PTHR11547:SF23 22 246 3.4E-86 T 23-04-2016 SHYC_RS10760 02fbca49964ada1bf19f75937015cfbc 335 PANTHER PTHR11547:SF23 298 335 3.4E-86 T 23-04-2016 SHYC_RS10760 02fbca49964ada1bf19f75937015cfbc 335 Gene3D G3DSA:3.30.590.10 13 245 9.5E-73 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SHYC_RS10760 02fbca49964ada1bf19f75937015cfbc 335 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 20 242 3.5E-76 T 23-04-2016 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: REACT_13 SHYC_RS10760 02fbca49964ada1bf19f75937015cfbc 335 ProSitePatterns PS00112 Phosphagen kinase active site signature. 158 164 - T 23-04-2016 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: REACT_13 SHYC_RS10760 02fbca49964ada1bf19f75937015cfbc 335 SUPERFAMILY SSF55931 4 256 1.21E-75 T 23-04-2016 SHYC_RS09650 08e196cbd23c998bb903f62e1a1157d7 307 PANTHER PTHR30448 3 306 1.3E-152 T 23-04-2016 SHYC_RS09650 08e196cbd23c998bb903f62e1a1157d7 307 SUPERFAMILY SSF52540 13 170 1.0E-11 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09650 08e196cbd23c998bb903f62e1a1157d7 307 PANTHER PTHR30448:SF0 3 306 1.3E-152 T 23-04-2016 SHYC_RS09650 08e196cbd23c998bb903f62e1a1157d7 307 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 12 298 41.825 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 SHYC_RS09650 08e196cbd23c998bb903f62e1a1157d7 307 PIRSF PIRSF005052 12 301 3.8E-113 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 SHYC_RS09650 08e196cbd23c998bb903f62e1a1157d7 307 Pfam PF03668 P-loop ATPase protein family 13 295 2.5E-107 T 23-04-2016 IPR005337 RapZ-like family GO:0005524 SHYC_RS09650 08e196cbd23c998bb903f62e1a1157d7 307 Gene3D G3DSA:3.40.50.300 11 170 4.6E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08450 b7792a076f0466d1357ac6e9993898fa 180 PANTHER PTHR41303 2 179 6.2E-49 T 23-04-2016 SHYC_RS08450 b7792a076f0466d1357ac6e9993898fa 180 PANTHER PTHR41303:SF1 2 179 6.2E-49 T 23-04-2016 SHYC_RS08450 b7792a076f0466d1357ac6e9993898fa 180 Pfam PF02620 Uncharacterized ACR, COG1399 55 172 5.5E-19 T 23-04-2016 IPR003772 Protein of unknown function DUF177 SHYC_RS03710 96ad8f49068495a0dd4e1fee296f52f7 146 Pfam PF14183 YwpF-like protein 2 131 1.6E-46 T 23-04-2016 IPR025573 YwpF-like protein SHYC_RS02880 b50014e4940705a44cdd2725b6161221 385 SUPERFAMILY SSF47203 236 380 1.01E-24 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SHYC_RS02880 b50014e4940705a44cdd2725b6161221 385 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 245 359 1.1E-15 T 23-04-2016 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 SHYC_RS02880 b50014e4940705a44cdd2725b6161221 385 Gene3D G3DSA:1.10.540.10 10 94 2.0E-17 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SHYC_RS02880 b50014e4940705a44cdd2725b6161221 385 Gene3D G3DSA:2.40.110.10 136 218 4.4E-26 T 23-04-2016 SHYC_RS02880 b50014e4940705a44cdd2725b6161221 385 Gene3D G3DSA:1.20.140.10 219 380 7.4E-40 T 23-04-2016 SHYC_RS02880 b50014e4940705a44cdd2725b6161221 385 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 29 96 5.6E-5 T 23-04-2016 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0008152|GO:0016627|GO:0050660|GO:0055114 SHYC_RS02880 b50014e4940705a44cdd2725b6161221 385 PANTHER PTHR10909:SF11 1 358 4.3E-46 T 23-04-2016 SHYC_RS02880 b50014e4940705a44cdd2725b6161221 385 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 217 3.9E-15 T 23-04-2016 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0003995|GO:0055114 SHYC_RS02880 b50014e4940705a44cdd2725b6161221 385 PANTHER PTHR10909 1 358 4.3E-46 T 23-04-2016 SHYC_RS02880 b50014e4940705a44cdd2725b6161221 385 SUPERFAMILY SSF56645 24 225 3.14E-39 T 23-04-2016 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 4.2E-88 T 23-04-2016 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 SUPERFAMILY SSF64484 5 1185 0.0 T 23-04-2016 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 Pfam PF04998 RNA polymerase Rpb1, domain 5 774 1134 4.5E-68 T 23-04-2016 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 Pfam PF05000 RNA polymerase Rpb1, domain 4 696 763 2.2E-15 T 23-04-2016 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 PANTHER PTHR19376 2 540 0.0 T 23-04-2016 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 PANTHER PTHR19376 557 1080 0.0 T 23-04-2016 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 PANTHER PTHR19376:SF32 2 540 0.0 T 23-04-2016 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 PANTHER PTHR19376:SF32 1121 1181 0.0 T 23-04-2016 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 5 1194 10.312 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 SMART SM00663 224 503 1.3E-182 T 23-04-2016 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 667 8.8E-32 T 23-04-2016 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 Gene3D G3DSA:2.40.40.20 406 477 6.1E-38 T 23-04-2016 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 Gene3D G3DSA:2.40.40.20 338 365 6.1E-38 T 23-04-2016 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 Gene3D G3DSA:2.40.50.100 975 1030 6.7E-5 T 23-04-2016 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 474 4.5E-39 T 23-04-2016 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 PANTHER PTHR19376 1121 1181 0.0 T 23-04-2016 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1185 0.0 T 23-04-2016 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS10655 dd477100c8ead21add85d58481775154 1205 PANTHER PTHR19376:SF32 557 1080 0.0 T 23-04-2016 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 SUPERFAMILY SSF47323 336 465 4.25E-33 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 SMART SM00840 351 415 2.0E-13 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 Gene3D G3DSA:3.40.50.620 19 304 9.0E-109 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 312 3.7E-133 T 23-04-2016 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 SUPERFAMILY SSF52374 2 312 5.9E-103 T 23-04-2016 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 Pfam PF09190 DALR domain 351 410 1.9E-14 T 23-04-2016 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 466 38.583 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 465 1.1E-180 T 23-04-2016 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16|Reactome: REACT_71 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 PANTHER PTHR10890 1 465 3.4E-242 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 Gene3D G3DSA:1.20.120.640 306 405 5.4E-20 T 23-04-2016 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 221 242 2.1E-28 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 2.1E-28 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 2.1E-28 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHYC_RS10720 f8be1815fb594809b42e266cd5a4d98f 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 190 208 2.1E-28 T 23-04-2016 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Gene3D G3DSA:3.30.65.10 560 621 6.5E-22 T 23-04-2016 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 PANTHER PTHR11390:SF27 1 682 0.0 T 23-04-2016 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 1.4E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 368 384 1.4E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 471 485 1.4E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 1.4E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 1.4E-35 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Gene3D G3DSA:2.70.20.10 317 454 2.8E-36 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Gene3D G3DSA:2.70.20.10 184 314 2.0E-33 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Pfam PF01751 Toprim domain 5 113 1.7E-29 T 23-04-2016 IPR006171 Toprim domain SHYC_RS07930 86c841af873b39aecff422375b70512a 689 PANTHER PTHR11390 1 682 0.0 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 SMART SM00437 242 508 6.3E-119 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Pfam PF01131 DNA topoisomerase 128 545 8.2E-133 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 SMART SM00436 104 192 4.9E-50 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 SMART SM00493 3 103 5.4E-33 T 23-04-2016 IPR006171 Toprim domain SHYC_RS07930 86c841af873b39aecff422375b70512a 689 SUPERFAMILY SSF56712 4 587 2.49E-198 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 631 55.446 T 23-04-2016 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Gene3D G3DSA:1.10.460.10 135 182 1.4E-60 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Gene3D G3DSA:1.10.460.10 455 559 1.4E-60 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Gene3D G3DSA:3.40.50.140 3 134 2.2E-44 T 23-04-2016 IPR006171 Toprim domain SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 574 610 1.1E-16 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 655 688 0.61 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 615 653 4.7E-14 T 23-04-2016 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 SHYC_RS07930 86c841af873b39aecff422375b70512a 689 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 609 1.4E-258 T 23-04-2016 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 SHYC_RS05855 a05cadd3835ce9ab2afd5e52c96f2dbd 406 SMART SM00981 75 165 1.8E-15 T 23-04-2016 IPR004114 THUMP domain GO:0003723 SHYC_RS05855 a05cadd3835ce9ab2afd5e52c96f2dbd 406 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 406 149.959 T 23-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SHYC_RS05855 a05cadd3835ce9ab2afd5e52c96f2dbd 406 SUPERFAMILY SSF143437 3 173 1.53E-44 T 23-04-2016 SHYC_RS05855 a05cadd3835ce9ab2afd5e52c96f2dbd 406 Pfam PF02926 THUMP domain 42 162 1.5E-12 T 23-04-2016 IPR004114 THUMP domain GO:0003723 SHYC_RS05855 a05cadd3835ce9ab2afd5e52c96f2dbd 406 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 370 1.1E-64 T 23-04-2016 IPR020536 Thil, AANH domain GO:0004810 UniPathway: UPA00060 SHYC_RS05855 a05cadd3835ce9ab2afd5e52c96f2dbd 406 Gene3D G3DSA:3.40.50.620 173 333 1.6E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS05855 a05cadd3835ce9ab2afd5e52c96f2dbd 406 SUPERFAMILY SSF52402 174 389 4.63E-52 T 23-04-2016 SHYC_RS05855 a05cadd3835ce9ab2afd5e52c96f2dbd 406 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 3.4E-119 T 23-04-2016 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 UniPathway: UPA00060 SHYC_RS05855 a05cadd3835ce9ab2afd5e52c96f2dbd 406 PANTHER PTHR14911 1 391 7.2E-159 T 23-04-2016 SHYC_RS05855 a05cadd3835ce9ab2afd5e52c96f2dbd 406 PANTHER PTHR14911:SF16 1 391 7.2E-159 T 23-04-2016 SHYC_RS05875 146b4c8f380e76091888432098fbbf42 164 PANTHER PTHR10681 3 164 2.1E-52 T 23-04-2016 SHYC_RS05875 146b4c8f380e76091888432098fbbf42 164 Pfam PF08534 Redoxin 20 158 2.3E-26 T 23-04-2016 IPR013740 Redoxin GO:0016491 SHYC_RS05875 146b4c8f380e76091888432098fbbf42 164 PANTHER PTHR10681:SF81 3 164 2.1E-52 T 23-04-2016 SHYC_RS05875 146b4c8f380e76091888432098fbbf42 164 Gene3D G3DSA:3.40.30.10 2 164 1.5E-46 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS05875 146b4c8f380e76091888432098fbbf42 164 SUPERFAMILY SSF52833 1 159 2.19E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS05875 146b4c8f380e76091888432098fbbf42 164 Hamap MF_00269 Probable thiol peroxidase [tpx]. 3 162 35.66 T 23-04-2016 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 SHYC_RS05875 146b4c8f380e76091888432098fbbf42 164 ProSitePatterns PS01265 Tpx family signature. 82 93 - T 23-04-2016 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 SHYC_RS03930 41f71bd0b61d50cb8553d2ded9423300 562 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 464 475 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03930 41f71bd0b61d50cb8553d2ded9423300 562 SUPERFAMILY SSF143975 1 375 2.88E-136 T 23-04-2016 SHYC_RS03930 41f71bd0b61d50cb8553d2ded9423300 562 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 556 1.4E-238 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03930 41f71bd0b61d50cb8553d2ded9423300 562 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 556 45.833 T 23-04-2016 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03930 41f71bd0b61d50cb8553d2ded9423300 562 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 121 131 - T 23-04-2016 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03930 41f71bd0b61d50cb8553d2ded9423300 562 SUPERFAMILY SSF52016 376 557 5.1E-60 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHYC_RS03930 41f71bd0b61d50cb8553d2ded9423300 562 Pfam PF00920 Dehydratase family 33 552 1.5E-223 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03930 41f71bd0b61d50cb8553d2ded9423300 562 PANTHER PTHR21000 1 559 0.0 T 23-04-2016 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03930 41f71bd0b61d50cb8553d2ded9423300 562 PANTHER PTHR21000:SF11 1 559 0.0 T 23-04-2016 SHYC_RS08045 58cca134b77600d96f425105c8a7671d 328 PANTHER PTHR30100 1 323 3.0E-123 T 23-04-2016 SHYC_RS08045 58cca134b77600d96f425105c8a7671d 328 PANTHER PTHR30100:SF1 1 323 3.0E-123 T 23-04-2016 SHYC_RS08045 58cca134b77600d96f425105c8a7671d 328 Gene3D G3DSA:3.40.718.10 1 324 4.9E-128 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SHYC_RS08045 58cca134b77600d96f425105c8a7671d 328 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 328 139.212 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SHYC_RS08045 58cca134b77600d96f425105c8a7671d 328 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 2 325 5.4E-117 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SHYC_RS08045 58cca134b77600d96f425105c8a7671d 328 PIRSF PIRSF002465 1 328 8.9E-124 T 23-04-2016 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 UniPathway: UPA00085 SHYC_RS08045 58cca134b77600d96f425105c8a7671d 328 SUPERFAMILY SSF53659 1 324 1.36E-99 T 23-04-2016 SHYC_RS08045 58cca134b77600d96f425105c8a7671d 328 Pfam PF02504 Fatty acid synthesis protein 2 312 2.9E-107 T 23-04-2016 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 UniPathway: UPA00085 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 ProSitePatterns PS01175 Ribonuclease II family signature. 546 570 - T 23-04-2016 IPR022966 Ribonuclease II/R, conserved site SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 TIGRFAM TIGR02063 RNase_R: ribonuclease R 2 709 6.9E-283 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 PANTHER PTHR23355 13 782 2.1E-273 T 23-04-2016 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 SMART SM00357 71 134 7.8E-6 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 SMART SM00357 139 203 0.14 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 SUPERFAMILY SSF50249 62 132 2.51E-13 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 SMART SM00316 627 709 1.3E-17 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 Gene3D G3DSA:2.40.50.140 629 708 2.3E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 Hamap MF_01895 Ribonuclease R [rnr]. 22 709 58.295 T 23-04-2016 IPR011805 Ribonuclease R GO:0003723|GO:0004518 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 Pfam PF00575 S1 RNA binding domain 629 708 5.4E-16 T 23-04-2016 IPR003029 S1 domain GO:0003676 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 PANTHER PTHR23355:SF9 13 782 2.1E-273 T 23-04-2016 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 Pfam PF00773 RNB domain 249 577 3.0E-110 T 23-04-2016 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 66 709 5.6E-221 T 23-04-2016 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 SUPERFAMILY SSF50249 209 627 4.2E-143 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 SUPERFAMILY SSF50249 629 708 4.62E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 SMART SM00955 249 579 2.7E-168 T 23-04-2016 SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 Pfam PF08206 Ribonuclease B OB domain 72 126 7.6E-18 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 Pfam PF08206 Ribonuclease B OB domain 149 199 4.3E-9 T 23-04-2016 IPR013223 Ribonuclease B, N-terminal OB domain SHYC_RS09535 eab1135dc915c8cf36f5ac26f398b79b 783 SUPERFAMILY SSF50249 127 226 1.57E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09095 510d11d86054ce8f2b3ad712f7cb0e25 264 Pfam PF13743 Thioredoxin 29 191 3.4E-41 T 23-04-2016 SHYC_RS09095 510d11d86054ce8f2b3ad712f7cb0e25 264 PANTHER PTHR13887:SF21 26 264 2.2E-73 T 23-04-2016 SHYC_RS09095 510d11d86054ce8f2b3ad712f7cb0e25 264 Gene3D G3DSA:3.40.30.10 24 205 2.5E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09095 510d11d86054ce8f2b3ad712f7cb0e25 264 SUPERFAMILY SSF52833 26 198 9.94E-11 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09095 510d11d86054ce8f2b3ad712f7cb0e25 264 PANTHER PTHR13887 26 264 2.2E-73 T 23-04-2016 SHYC_RS11090 a7375517ff8795da91438cab0310e3a7 198 PANTHER PTHR30446:SF0 1 198 2.9E-119 T 23-04-2016 SHYC_RS11090 a7375517ff8795da91438cab0310e3a7 198 SUPERFAMILY SSF111304 1 198 1.18E-77 T 23-04-2016 IPR023627 Recombination protein RecR SHYC_RS11090 a7375517ff8795da91438cab0310e3a7 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 109.224 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SHYC_RS11090 a7375517ff8795da91438cab0310e3a7 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 23-04-2016 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 SHYC_RS11090 a7375517ff8795da91438cab0310e3a7 198 Pfam PF02132 RecR protein 40 78 3.0E-16 T 23-04-2016 IPR023628 Recombination protein RecR, C4-type zinc finger SHYC_RS11090 a7375517ff8795da91438cab0310e3a7 198 PANTHER PTHR30446 1 198 2.9E-119 T 23-04-2016 SHYC_RS11090 a7375517ff8795da91438cab0310e3a7 198 SMART SM00278 12 31 0.0049 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHYC_RS11090 a7375517ff8795da91438cab0310e3a7 198 Pfam PF13662 Toprim domain 80 171 2.5E-25 T 23-04-2016 IPR006171 Toprim domain SHYC_RS11090 a7375517ff8795da91438cab0310e3a7 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 1.3E-87 T 23-04-2016 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 SHYC_RS11090 a7375517ff8795da91438cab0310e3a7 198 SMART SM00493 80 165 8.5E-15 T 23-04-2016 IPR006171 Toprim domain SHYC_RS03915 dee8ebaf96fc4f63738599e26dac0c41 334 SUPERFAMILY SSF51735 3 182 1.02E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS03915 dee8ebaf96fc4f63738599e26dac0c41 334 PANTHER PTHR21371 1 333 1.8E-190 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03915 dee8ebaf96fc4f63738599e26dac0c41 334 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 325 1.0E-63 T 23-04-2016 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03915 dee8ebaf96fc4f63738599e26dac0c41 334 Gene3D G3DSA:3.50.50.60 4 37 1.5E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS03915 dee8ebaf96fc4f63738599e26dac0c41 334 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 326 2.5E-135 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03915 dee8ebaf96fc4f63738599e26dac0c41 334 SUPERFAMILY SSF48179 183 331 2.55E-67 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS03915 dee8ebaf96fc4f63738599e26dac0c41 334 Gene3D G3DSA:1.10.1040.10 38 325 2.0E-111 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHYC_RS03915 dee8ebaf96fc4f63738599e26dac0c41 334 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 3.7E-76 T 23-04-2016 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03915 dee8ebaf96fc4f63738599e26dac0c41 334 Hamap MF_00435 Ketol-acid reductoisomerase [ilvC]. 2 328 44.786 T 23-04-2016 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 SUPERFAMILY SSF52518 199 459 1.09E-71 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 SUPERFAMILY SSF53323 2 221 1.06E-41 T 23-04-2016 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 SUPERFAMILY SSF52922 475 584 4.01E-17 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 4 574 2.6E-208 T 23-04-2016 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969|UniPathway: UPA00223 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 Gene3D G3DSA:3.40.50.920 474 583 5.8E-14 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 Gene3D G3DSA:3.40.920.10 4 178 7.9E-37 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 Gene3D G3DSA:3.40.50.970 199 386 3.2E-82 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 175 5.5E-40 T 23-04-2016 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 210 451 5.9E-64 T 23-04-2016 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 PANTHER PTHR32154:SF20 3 379 8.4E-254 T 23-04-2016 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 PANTHER PTHR32154:SF20 414 574 8.4E-254 T 23-04-2016 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 484 551 5.2E-9 T 23-04-2016 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 PANTHER PTHR32154 3 379 8.4E-254 T 23-04-2016 SHYC_RS07710 8ba43ec1c58955e8c629d43e0af50a0b 586 PANTHER PTHR32154 414 574 8.4E-254 T 23-04-2016 SHYC_RS08790 501ece6fb02ca0ba31ed1529d1b48bac 201 PANTHER PTHR11403 4 199 7.1E-106 T 23-04-2016 IPR024791 Cytochrome c oxidase subunit III GO:0015002|GO:0016020|GO:0019646 SHYC_RS08790 501ece6fb02ca0ba31ed1529d1b48bac 201 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 9 198 4.1E-98 T 23-04-2016 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 KEGG: 00965+1.10.3.- SHYC_RS08790 501ece6fb02ca0ba31ed1529d1b48bac 201 Pfam PF00510 Cytochrome c oxidase subunit III 19 196 6.1E-13 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SHYC_RS08790 501ece6fb02ca0ba31ed1529d1b48bac 201 PANTHER PTHR11403:SF2 4 199 7.1E-106 T 23-04-2016 SHYC_RS08790 501ece6fb02ca0ba31ed1529d1b48bac 201 Gene3D G3DSA:1.20.120.80 18 196 1.6E-46 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 SHYC_RS08790 501ece6fb02ca0ba31ed1529d1b48bac 201 SUPERFAMILY SSF81452 16 196 1.96E-50 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SHYC_RS10110 8f83cd5fbda56e15b7bc043cda994d05 330 PANTHER PTHR10953 3 274 6.9E-56 T 23-04-2016 SHYC_RS10110 8f83cd5fbda56e15b7bc043cda994d05 330 Gene3D G3DSA:3.40.50.720 2 242 7.4E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS10110 8f83cd5fbda56e15b7bc043cda994d05 330 SUPERFAMILY SSF69572 2 312 1.7E-65 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHYC_RS10110 8f83cd5fbda56e15b7bc043cda994d05 330 Pfam PF00899 ThiF family 4 239 3.8E-49 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHYC_RS10110 8f83cd5fbda56e15b7bc043cda994d05 330 PANTHER PTHR10953:SF156 3 274 6.9E-56 T 23-04-2016 SHYC_RS02470 c378338beb3517829dfa0675efd942db 312 SUPERFAMILY SSF144083 246 307 1.31E-10 T 23-04-2016 SHYC_RS02470 c378338beb3517829dfa0675efd942db 312 Gene3D G3DSA:3.30.460.20 12 115 2.1E-8 T 23-04-2016 SHYC_RS02470 c378338beb3517829dfa0675efd942db 312 SUPERFAMILY SSF143865 12 245 7.85E-37 T 23-04-2016 SHYC_RS02470 c378338beb3517829dfa0675efd942db 312 PANTHER PTHR21535 6 311 3.8E-71 T 23-04-2016 SHYC_RS02470 c378338beb3517829dfa0675efd942db 312 Pfam PF01544 CorA-like Mg2+ transporter protein 21 305 9.0E-52 T 23-04-2016 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 SHYC_RS02470 c378338beb3517829dfa0675efd942db 312 Gene3D G3DSA:1.20.58.340 234 309 8.3E-16 T 23-04-2016 SHYC_RS02470 c378338beb3517829dfa0675efd942db 312 PANTHER PTHR21535:SF40 6 311 3.8E-71 T 23-04-2016 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 PANTHER PTHR30314 1 389 5.6E-207 T 23-04-2016 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 Gene3D G3DSA:3.30.1330.20 216 318 3.1E-49 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 SMART SM00865 207 324 2.0E-57 T 23-04-2016 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 SUPERFAMILY SSF55307 207 318 2.75E-44 T 23-04-2016 IPR008280 Tubulin/FtsZ, C-terminal SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 SMART SM00864 13 205 8.9E-117 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 Gene3D G3DSA:3.40.50.1440 14 215 1.5E-96 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 PANTHER PTHR30314:SF3 1 389 5.6E-207 T 23-04-2016 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 Pfam PF12327 FtsZ family, C-terminal domain 222 316 8.5E-34 T 23-04-2016 IPR024757 Cell division protein FtsZ, C-terminal SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 23-04-2016 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.2E-45 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.2E-50 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.2E-50 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.2E-50 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.2E-50 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 329 2.8E-138 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 362 39.107 T 23-04-2016 IPR000158 Cell division protein FtsZ GO:0005525 SHYC_RS08270 1f51384721a6491e72f5c14c6225c58d 389 SUPERFAMILY SSF52490 13 208 6.15E-72 T 23-04-2016 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 SUPERFAMILY SSF51998 163 378 1.4E-161 T 23-04-2016 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 SUPERFAMILY SSF51998 764 1069 1.4E-161 T 23-04-2016 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Gene3D G3DSA:3.20.70.20 950 993 1.8E-53 T 23-04-2016 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Gene3D G3DSA:3.20.70.20 752 888 1.8E-53 T 23-04-2016 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Gene3D G3DSA:3.20.70.20 74 285 1.8E-53 T 23-04-2016 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Gene3D G3DSA:3.20.70.20 1025 1068 1.8E-53 T 23-04-2016 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Gene3D G3DSA:3.20.70.20 338 360 1.8E-53 T 23-04-2016 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 SMART SM00305 724 768 1.1E-9 T 23-04-2016 IPR003586 Hint domain C-terminal SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 PANTHER PTHR11573 763 1069 1.2E-215 T 23-04-2016 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 PANTHER PTHR11573 40 377 1.2E-215 T 23-04-2016 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Pfam PF08343 Ribonucleotide reductase N-terminal 3 85 3.4E-24 T 23-04-2016 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 378 457 6.4E-13 T 23-04-2016 IPR006141 Intein N-terminal splicing region GO:0016539 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 741 763 8.5E-7 T 23-04-2016 IPR030934 Intein C-terminal splicing region SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 939 961 - T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Pfam PF02867 Ribonucleotide reductase, barrel domain 164 1065 5.1E-138 T 23-04-2016 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 SUPERFAMILY SSF51294 727 763 3.53E-27 T 23-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 SUPERFAMILY SSF51294 378 486 3.53E-27 T 23-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 SUPERFAMILY SSF48168 2 159 1.31E-40 T 23-04-2016 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Pfam PF14528 LAGLIDADG-like domain 608 699 3.2E-14 T 23-04-2016 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Gene3D G3DSA:2.170.16.10 705 751 1.4E-28 T 23-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Gene3D G3DSA:2.170.16.10 378 509 1.4E-28 T 23-04-2016 IPR028992 Hedgehog/Intein (Hint) domain SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 SUPERFAMILY SSF55608 593 701 3.74E-12 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 88 159 2.2E-12 T 23-04-2016 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Pfam PF14890 Intein splicing domain 386 760 1.9E-12 T 23-04-2016 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 PRINTS PR00379 Intein signature 498 510 1.07E-11 T 23-04-2016 IPR006142 Intein GO:0016539 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 PRINTS PR00379 Intein signature 639 654 1.07E-11 T 23-04-2016 IPR006142 Intein GO:0016539 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 PRINTS PR00379 Intein signature 447 460 1.07E-11 T 23-04-2016 IPR006142 Intein GO:0016539 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 PRINTS PR00379 Intein signature 607 619 1.07E-11 T 23-04-2016 IPR006142 Intein GO:0016539 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 PRINTS PR00379 Intein signature 739 756 1.07E-11 T 23-04-2016 IPR006142 Intein GO:0016539 SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 SMART SM00306 376 485 9.4E-12 T 23-04-2016 IPR003587 Hint domain N-terminal SHYC_RS05230 27559aca721279b9464828c1ebb7f8b2 1081 Gene3D G3DSA:3.10.28.10 594 704 7.0E-17 T 23-04-2016 IPR027434 Homing endonuclease GO:0004519 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 264 392 1.8E-7 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 Pfam PF13457 SH3-like domain 928 994 1.1 T 23-04-2016 IPR025987 SH3-like domain KEGG: 00511+3.2.1.96 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 Pfam PF13457 SH3-like domain 791 829 4.6 T 23-04-2016 IPR025987 SH3-like domain KEGG: 00511+3.2.1.96 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 Pfam PF13457 SH3-like domain 455 523 1.9E-4 T 23-04-2016 IPR025987 SH3-like domain KEGG: 00511+3.2.1.96 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 Pfam PF13457 SH3-like domain 847 909 0.01 T 23-04-2016 IPR025987 SH3-like domain KEGG: 00511+3.2.1.96 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 Pfam PF13457 SH3-like domain 618 678 3.9E-5 T 23-04-2016 IPR025987 SH3-like domain KEGG: 00511+3.2.1.96 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 PANTHER PTHR33308:SF4 982 1239 2.2E-80 T 23-04-2016 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 1087 1223 1.1E-11 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 SMART SM00047 1074 1234 2.2E-57 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 SUPERFAMILY SSF55846 252 409 5.76E-34 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 Gene3D G3DSA:2.30.30.170 461 526 4.9E-4 T 23-04-2016 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 Gene3D G3DSA:2.30.30.170 618 681 8.8E-4 T 23-04-2016 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 Gene3D G3DSA:3.40.80.10 254 396 2.1E-15 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 PANTHER PTHR33308 982 1239 2.2E-80 T 23-04-2016 SHYC_RS08875 f4af29bb0b65b5b0506c468207d8130e 1240 SMART SM00644 251 392 3.0E-39 T 23-04-2016 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 SHYC_RS09940 480394ee09a986344e1b950cd58d092d 323 PANTHER PTHR10859:SF81 1 310 1.4E-169 T 23-04-2016 SHYC_RS09940 480394ee09a986344e1b950cd58d092d 323 SUPERFAMILY SSF53448 1 249 8.13E-35 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS09940 480394ee09a986344e1b950cd58d092d 323 Pfam PF00535 Glycosyl transferase family 2 5 171 8.3E-30 T 23-04-2016 IPR001173 Glycosyltransferase 2-like SHYC_RS09940 480394ee09a986344e1b950cd58d092d 323 PANTHER PTHR10859 1 310 1.4E-169 T 23-04-2016 SHYC_RS09940 480394ee09a986344e1b950cd58d092d 323 Gene3D G3DSA:3.90.550.10 1 158 2.4E-24 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS06170 f9abf8263b1104ef055ab0e0595d8285 341 Gene3D G3DSA:3.40.1780.10 2 62 2.4E-99 T 23-04-2016 SHYC_RS06170 f9abf8263b1104ef055ab0e0595d8285 341 Gene3D G3DSA:3.40.1780.10 178 341 2.4E-99 T 23-04-2016 SHYC_RS06170 f9abf8263b1104ef055ab0e0595d8285 341 PANTHER PTHR30307:SF0 2 341 7.1E-174 T 23-04-2016 SHYC_RS06170 f9abf8263b1104ef055ab0e0595d8285 341 SUPERFAMILY SSF111337 2 341 2.88E-136 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS06170 f9abf8263b1104ef055ab0e0595d8285 341 Pfam PF02547 Queuosine biosynthesis protein 4 340 7.2E-139 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS06170 f9abf8263b1104ef055ab0e0595d8285 341 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 2 341 4.3E-139 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS06170 f9abf8263b1104ef055ab0e0595d8285 341 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 45.478 T 23-04-2016 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS06170 f9abf8263b1104ef055ab0e0595d8285 341 PANTHER PTHR30307 2 341 7.1E-174 T 23-04-2016 SHYC_RS06170 f9abf8263b1104ef055ab0e0595d8285 341 Gene3D G3DSA:2.40.10.240 64 143 7.8E-26 T 23-04-2016 SHYC_RS02010 2cf42729f4a856d59af4ccaebff8cbce 382 PANTHER PTHR11958 102 374 5.7E-53 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS02010 2cf42729f4a856d59af4ccaebff8cbce 382 PANTHER PTHR11958:SF53 102 374 5.7E-53 T 23-04-2016 SHYC_RS02010 2cf42729f4a856d59af4ccaebff8cbce 382 Gene3D G3DSA:1.10.3860.10 2 377 1.2E-53 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS02010 2cf42729f4a856d59af4ccaebff8cbce 382 Pfam PF00375 Sodium:dicarboxylate symporter family 3 375 1.1E-68 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS02010 2cf42729f4a856d59af4ccaebff8cbce 382 SUPERFAMILY SSF118215 3 376 3.01E-73 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 SMART SM00387 343 455 7.0E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 Gene3D G3DSA:1.10.287.130 224 286 3.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 Gene3D G3DSA:3.30.565.10 287 452 1.3E-38 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 SMART SM00388 232 299 4.1E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 SUPERFAMILY SSF158472 179 229 4.05E-5 T 23-04-2016 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 4.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 4.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 4.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 4.3E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 453 8.9E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 Pfam PF00672 HAMP domain 159 227 6.5E-8 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 SUPERFAMILY SSF55874 289 451 2.49E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 SUPERFAMILY SSF47384 215 297 3.34E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 SMART SM00304 178 231 0.0073 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 297 3.2E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS07200 10765ccd3bbe3ac9fdcdf9bbd09e4735 456 PANTHER PTHR24423 172 451 2.0E-64 T 23-04-2016 SHYC_RS07315 306593e0418f32c50133c2aa9b9b39c4 314 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 311 4.8E-84 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SHYC_RS07315 306593e0418f32c50133c2aa9b9b39c4 314 PIRSF PIRSF000535 1 314 1.4E-93 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SHYC_RS07315 306593e0418f32c50133c2aa9b9b39c4 314 PRINTS PR00990 Ribokinase signature 33 52 8.6E-6 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SHYC_RS07315 306593e0418f32c50133c2aa9b9b39c4 314 PRINTS PR00990 Ribokinase signature 223 234 8.6E-6 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SHYC_RS07315 306593e0418f32c50133c2aa9b9b39c4 314 PRINTS PR00990 Ribokinase signature 178 193 8.6E-6 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SHYC_RS07315 306593e0418f32c50133c2aa9b9b39c4 314 PANTHER PTHR10584 4 311 7.1E-78 T 23-04-2016 SHYC_RS07315 306593e0418f32c50133c2aa9b9b39c4 314 PANTHER PTHR10584:SF178 4 311 7.1E-78 T 23-04-2016 SHYC_RS07315 306593e0418f32c50133c2aa9b9b39c4 314 SUPERFAMILY SSF53613 5 295 9.67E-63 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS07315 306593e0418f32c50133c2aa9b9b39c4 314 Gene3D G3DSA:3.40.1190.20 34 312 2.5E-70 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS07315 306593e0418f32c50133c2aa9b9b39c4 314 Pfam PF00294 pfkB family carbohydrate kinase 9 295 3.5E-50 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB SHYC_RS03895 4b0d708495a860a459bcfdc6d2beed0c 192 Gene3D G3DSA:3.20.19.10 3 188 1.5E-48 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHYC_RS03895 4b0d708495a860a459bcfdc6d2beed0c 192 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 3 192 38.931 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03895 4b0d708495a860a459bcfdc6d2beed0c 192 Pfam PF00694 Aconitase C-terminal domain 5 124 7.7E-36 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03895 4b0d708495a860a459bcfdc6d2beed0c 192 SUPERFAMILY SSF52016 4 187 3.14E-57 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHYC_RS03895 4b0d708495a860a459bcfdc6d2beed0c 192 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 4 182 9.1E-69 T 23-04-2016 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03895 4b0d708495a860a459bcfdc6d2beed0c 192 PANTHER PTHR11670:SF27 3 192 1.1E-85 T 23-04-2016 SHYC_RS03895 4b0d708495a860a459bcfdc6d2beed0c 192 PANTHER PTHR11670 3 192 1.1E-85 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 PANTHER PTHR10937 1 600 7.4E-288 T 23-04-2016 SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 Gene3D G3DSA:3.40.50.10490 243 438 1.2E-64 T 23-04-2016 SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 Pfam PF13522 Glutamine amidotransferase domain 61 192 1.4E-20 T 23-04-2016 SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 SUPERFAMILY SSF53697 244 600 1.95E-92 T 23-04-2016 SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 PANTHER PTHR10937:SF0 1 600 7.4E-288 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 Gene3D G3DSA:3.40.50.10490 439 600 7.6E-51 T 23-04-2016 SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 38.05 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 SUPERFAMILY SSF56235 2 233 1.8E-62 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 Gene3D G3DSA:3.60.20.10 2 239 9.5E-68 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 2.3E-223 T 23-04-2016 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: REACT_17015 SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 Pfam PF01380 SIS domain 460 582 2.0E-16 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SHYC_RS03450 c8b5a16124118f784a23ebb77fb0e485 600 Pfam PF01380 SIS domain 290 412 6.4E-31 T 23-04-2016 IPR001347 Sugar isomerase (SIS) GO:0005975|GO:0030246 Reactome: REACT_17015 SHYC_RS03180 89e6982a7c8d743972ad9151f98170d2 121 SUPERFAMILY SSF46946 2 120 1.83E-44 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SHYC_RS03180 89e6982a7c8d743972ad9151f98170d2 121 PIRSF PIRSF002134 1 121 7.3E-43 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03180 89e6982a7c8d743972ad9151f98170d2 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 3.5E-33 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03180 89e6982a7c8d743972ad9151f98170d2 121 Gene3D G3DSA:1.10.8.50 1 71 3.6E-32 T 23-04-2016 SHYC_RS03180 89e6982a7c8d743972ad9151f98170d2 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 119 28.353 T 23-04-2016 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03180 89e6982a7c8d743972ad9151f98170d2 121 Gene3D G3DSA:4.10.910.10 72 121 2.8E-26 T 23-04-2016 IPR027437 30s ribosomal protein S13, C-terminal SHYC_RS03180 89e6982a7c8d743972ad9151f98170d2 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 4.9E-53 T 23-04-2016 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03180 89e6982a7c8d743972ad9151f98170d2 121 PANTHER PTHR10871 1 121 4.1E-71 T 23-04-2016 SHYC_RS03180 89e6982a7c8d743972ad9151f98170d2 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 23-04-2016 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHYC_RS06055 436d65ce72924e721e48eb3ea21f7a2b 195 SUPERFAMILY SSF52540 16 194 2.7E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06055 436d65ce72924e721e48eb3ea21f7a2b 195 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 191 2.0E-67 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SHYC_RS06055 436d65ce72924e721e48eb3ea21f7a2b 195 PANTHER PTHR11649 1 191 4.0E-49 T 23-04-2016 SHYC_RS06055 436d65ce72924e721e48eb3ea21f7a2b 195 Pfam PF01926 50S ribosome-binding GTPase 27 145 1.3E-20 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS06055 436d65ce72924e721e48eb3ea21f7a2b 195 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 13 195 27.399 T 23-04-2016 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0000917|GO:0005525 SHYC_RS06055 436d65ce72924e721e48eb3ea21f7a2b 195 Gene3D G3DSA:3.40.50.300 12 194 1.8E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06085 bc57e79dc70592ca30acd6bcdf59cc89 428 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 424 3.7E-186 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS06085 bc57e79dc70592ca30acd6bcdf59cc89 428 Pfam PF00202 Aminotransferase class-III 33 397 1.7E-72 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS06085 bc57e79dc70592ca30acd6bcdf59cc89 428 Gene3D G3DSA:3.40.640.10 72 315 3.8E-76 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS06085 bc57e79dc70592ca30acd6bcdf59cc89 428 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 426 98.385 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS06085 bc57e79dc70592ca30acd6bcdf59cc89 428 Gene3D G3DSA:3.90.1150.10 320 424 3.0E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS06085 bc57e79dc70592ca30acd6bcdf59cc89 428 Gene3D G3DSA:3.90.1150.10 2 71 3.0E-43 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS06085 bc57e79dc70592ca30acd6bcdf59cc89 428 SUPERFAMILY SSF53383 1 425 2.42E-124 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS06085 bc57e79dc70592ca30acd6bcdf59cc89 428 PANTHER PTHR11986 1 428 1.1E-220 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS06085 bc57e79dc70592ca30acd6bcdf59cc89 428 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS06085 bc57e79dc70592ca30acd6bcdf59cc89 428 PANTHER PTHR11986:SF5 1 428 1.1E-220 T 23-04-2016 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 SUPERFAMILY SSF55347 181 491 1.08E-110 T 23-04-2016 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 PIRSF PIRSF000110 1 493 4.9E-183 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 14 191 9.2E-61 T 23-04-2016 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 PANTHER PTHR23429 1 489 1.0E-219 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 489 3.7E-110 T 23-04-2016 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 SUPERFAMILY SSF51735 9 194 5.91E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 10 491 1.3E-188 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 1.6E-47 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 1.6E-47 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 1.6E-47 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 1.6E-47 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 1.6E-47 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 Gene3D G3DSA:3.40.50.720 10 190 6.9E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 PANTHER PTHR23429:SF0 1 489 1.0E-219 T 23-04-2016 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 491 82.64 T 23-04-2016 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268|UniPathway: UPA00115 SHYC_RS06840 c37167b4a566f695a49a68a08ce4a49f 494 Gene3D G3DSA:3.30.360.10 191 490 1.8E-116 T 23-04-2016 SHYC_RS02240 03f7e51e735db409b88407d4dc277925 379 PANTHER PTHR21599 1 377 6.2E-172 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHYC_RS02240 03f7e51e735db409b88407d4dc277925 379 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 4 377 4.0E-160 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHYC_RS02240 03f7e51e735db409b88407d4dc277925 379 PANTHER PTHR21599:SF4 1 377 6.2E-172 T 23-04-2016 SHYC_RS02240 03f7e51e735db409b88407d4dc277925 379 PIRSF PIRSF006078 2 377 1.1E-137 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHYC_RS02240 03f7e51e735db409b88407d4dc277925 379 Gene3D G3DSA:3.90.1510.10 44 277 5.3E-96 T 23-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 SHYC_RS02240 03f7e51e735db409b88407d4dc277925 379 Pfam PF02595 Glycerate kinase family 5 375 8.2E-149 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHYC_RS02240 03f7e51e735db409b88407d4dc277925 379 SUPERFAMILY SSF110738 3 377 9.15E-137 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 5 646 0.0 T 23-04-2016 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 KEGG: 00965+1.10.3.-|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PANTHER PTHR10422:SF6 32 611 0.0 T 23-04-2016 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 273 294 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 319 334 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 406 425 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 456 477 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 378 396 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 222 241 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 343 364 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 193 211 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 3.7E-99 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 275 329 - T 23-04-2016 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 SUPERFAMILY SSF81442 42 555 4.06E-169 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 Gene3D G3DSA:1.20.210.10 40 586 4.9E-183 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 PANTHER PTHR10422 32 611 0.0 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS08785 d5e0b0fbbc132cbe7daa55bb3f118974 662 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 500 4.0E-139 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 Gene3D G3DSA:1.10.10.10 10 66 1.4E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 95 128 5.0E-7 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 PANTHER PTHR34471:SF1 1 140 2.2E-13 T 23-04-2016 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 PANTHER PTHR34471 1 140 2.2E-13 T 23-04-2016 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 Pfam PF01316 Arginine repressor, DNA binding domain 1 69 3.7E-7 T 23-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 SUPERFAMILY SSF46785 5 78 2.0E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 Pfam PF02863 Arginine repressor, C-terminal domain 87 144 3.1E-12 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 SUPERFAMILY SSF55252 83 147 5.1E-14 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 Hamap MF_00173 Arginine repressor [argR]. 1 152 26.093 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 PRINTS PR01467 Bacterial arginine repressor signature 89 102 5.9E-5 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 PRINTS PR01467 Bacterial arginine repressor signature 38 53 5.9E-5 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 PRINTS PR01467 Bacterial arginine repressor signature 119 134 5.9E-5 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SHYC_RS00855 ff0367c14758e3ecf3431faaf7035ed2 152 Gene3D G3DSA:3.30.1360.40 76 145 2.8E-14 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain SHYC_RS04160 ecee10dc119fda1fca44697a4196b101 356 Gene3D G3DSA:3.90.340.10 1 127 3.7E-50 T 23-04-2016 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 SHYC_RS04160 ecee10dc119fda1fca44697a4196b101 356 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 60 67 - T 23-04-2016 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 SHYC_RS04160 ecee10dc119fda1fca44697a4196b101 356 Gene3D G3DSA:3.90.1230.10 182 292 2.3E-32 T 23-04-2016 SHYC_RS04160 ecee10dc119fda1fca44697a4196b101 356 PANTHER PTHR19384 168 349 7.8E-113 T 23-04-2016 SHYC_RS04160 ecee10dc119fda1fca44697a4196b101 356 PANTHER PTHR19384:SF17 168 349 7.8E-113 T 23-04-2016 SHYC_RS04160 ecee10dc119fda1fca44697a4196b101 356 Pfam PF02898 Nitric oxide synthase, oxygenase domain 1 348 1.1E-144 T 23-04-2016 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 SHYC_RS04160 ecee10dc119fda1fca44697a4196b101 356 PIRSF PIRSF037219 1 353 1.4E-142 T 23-04-2016 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.13.165|KEGG: 00330+1.14.13.165 SHYC_RS04160 ecee10dc119fda1fca44697a4196b101 356 SUPERFAMILY SSF56512 2 352 1.83E-146 T 23-04-2016 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 PANTHER PTHR22594:SF4 3 495 5.3E-284 T 23-04-2016 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 494 4.8E-222 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 SUPERFAMILY SSF50249 4 147 1.12E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 254 271 3.6E-40 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 236 249 3.6E-40 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 3.6E-40 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 377 393 3.6E-40 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 3.6E-40 T 23-04-2016 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 11 495 46.178 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 PANTHER PTHR22594 3 495 5.3E-284 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 PIRSF PIRSF039101 1 495 1.3E-197 T 23-04-2016 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 Pfam PF00152 tRNA synthetases class II (D, K and N) 156 492 4.3E-84 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 Pfam PF01336 OB-fold nucleic acid binding domain 62 138 2.1E-13 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 SUPERFAMILY SSF55681 154 493 6.77E-124 T 23-04-2016 SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 Gene3D G3DSA:2.40.50.140 6 147 9.0E-48 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS10880 e9d7cce75639996c78abfec3bfe008ea 495 Gene3D G3DSA:3.30.930.10 149 490 6.6E-129 T 23-04-2016 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Gene3D G3DSA:3.40.50.1380 931 1050 2.5E-34 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 SMART SM01209 666 836 2.6E-4 T 23-04-2016 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 1.5E-40 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 SUPERFAMILY SSF52440 1 127 1.58E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 SUPERFAMILY SSF52440 550 668 3.88E-47 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Gene3D G3DSA:3.30.470.20 200 398 5.3E-76 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Gene3D G3DSA:3.30.470.20 738 928 8.9E-72 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Gene3D G3DSA:3.30.1490.20 141 199 1.6E-23 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Gene3D G3DSA:1.10.1030.10 399 531 1.6E-49 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 PANTHER PTHR11405 1 1050 0.0 T 23-04-2016 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Pfam PF02142 MGS-like domain 949 1035 2.3E-19 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 SMART SM01096 420 540 6.3E-66 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1045 0.0 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1057 13.401 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 SUPERFAMILY SSF52335 935 1051 2.09E-33 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 1.2E-79 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 667 866 8.4E-40 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Gene3D G3DSA:3.40.50.20 532 655 6.0E-58 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Gene3D G3DSA:3.40.50.20 4 108 2.6E-42 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 PANTHER PTHR11405:SF5 1 1050 0.0 T 23-04-2016 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Gene3D G3DSA:3.30.1490.20 679 737 7.9E-30 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 SUPERFAMILY SSF56059 666 927 9.37E-101 T 23-04-2016 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 SUPERFAMILY SSF48108 395 546 1.03E-51 T 23-04-2016 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 SUPERFAMILY SSF56059 128 399 4.42E-106 T 23-04-2016 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 SMART SM00851 949 1035 3.1E-25 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1056 13.072 T 23-04-2016 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 3.8E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 3.8E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 3.8E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 3.8E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 3.8E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 3.8E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08190 5fa29d8ab626da822b7459f19192f10b 1057 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 3.8E-64 T 23-04-2016 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS07035 950e1fcdb3d3a253a95600d10eaf00d9 400 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 256 394 1.8E-23 T 23-04-2016 IPR032810 CCA-adding enzyme, C-terminal SHYC_RS07035 950e1fcdb3d3a253a95600d10eaf00d9 400 SUPERFAMILY SSF81891 141 395 1.05E-47 T 23-04-2016 SHYC_RS07035 950e1fcdb3d3a253a95600d10eaf00d9 400 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 171 228 3.2E-10 T 23-04-2016 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain SHYC_RS07035 950e1fcdb3d3a253a95600d10eaf00d9 400 PANTHER PTHR13734 13 234 1.0E-73 T 23-04-2016 SHYC_RS07035 950e1fcdb3d3a253a95600d10eaf00d9 400 Gene3D G3DSA:1.10.3090.10 144 365 1.9E-38 T 23-04-2016 SHYC_RS07035 950e1fcdb3d3a253a95600d10eaf00d9 400 Hamap MF_01263 CCA-adding enzyme [cca]. 3 398 37.2 T 23-04-2016 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 SHYC_RS07035 950e1fcdb3d3a253a95600d10eaf00d9 400 Pfam PF01743 Poly A polymerase head domain 23 143 2.0E-38 T 23-04-2016 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 SHYC_RS07035 950e1fcdb3d3a253a95600d10eaf00d9 400 SUPERFAMILY SSF81301 6 140 1.8E-43 T 23-04-2016 SHYC_RS07035 950e1fcdb3d3a253a95600d10eaf00d9 400 Gene3D G3DSA:3.30.460.10 7 143 4.3E-50 T 23-04-2016 SHYC_RS04105 3958201e588d84149f87854f43c761c6 280 Pfam PF13349 Putative adhesin 45 279 2.0E-23 T 23-04-2016 IPR025164 Putative adhesin SHYC_RS04105 3958201e588d84149f87854f43c761c6 280 PANTHER PTHR41298:SF2 1 280 1.2E-25 T 23-04-2016 SHYC_RS04105 3958201e588d84149f87854f43c761c6 280 PANTHER PTHR41298 1 280 1.2E-25 T 23-04-2016 SHYC_RS05480 be416b8fdc9f9f4d7501c7c882ec0958 80 Pfam PF10031 Small integral membrane protein (DUF2273) 20 67 4.0E-13 T 23-04-2016 IPR018730 Protein of unknown function DUF2273 SHYC_RS06700 d3c0deb0589a8a39fbbf291aa673476c 491 Gene3D G3DSA:3.40.640.10 85 288 5.1E-44 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS06700 d3c0deb0589a8a39fbbf291aa673476c 491 SUPERFAMILY SSF53383 33 482 4.78E-112 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS06700 d3c0deb0589a8a39fbbf291aa673476c 491 Pfam PF00266 Aminotransferase class-V 162 281 4.6E-9 T 23-04-2016 IPR000192 Aminotransferase class V domain SHYC_RS06700 d3c0deb0589a8a39fbbf291aa673476c 491 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 56.91 T 23-04-2016 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 SHYC_RS06700 d3c0deb0589a8a39fbbf291aa673476c 491 PANTHER PTHR11773 7 483 3.5E-288 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 SUPERFAMILY SSF53790 3 220 9.68E-77 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 Gene3D G3DSA:1.10.10.60 235 277 4.8E-4 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 PANTHER PTHR21091:SF18 1 229 7.2E-82 T 23-04-2016 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 4 275 2.4E-82 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 Gene3D G3DSA:3.40.1010.10 3 111 1.8E-17 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 PANTHER PTHR21091 1 229 7.2E-82 T 23-04-2016 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 200 8.8E-29 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 Gene3D G3DSA:3.30.950.10 112 224 9.8E-33 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 3 222 35.89 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 81 92 - T 23-04-2016 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS11025 53b0f04bd3aa4c32b5214a684af5333f 277 PIRSF PIRSF005917 1 277 1.2E-96 T 23-04-2016 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 PANTHER PTHR21060 1 351 2.7E-120 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 Gene3D G3DSA:3.30.420.40 177 334 1.1E-37 T 23-04-2016 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 Pfam PF00871 Acetokinase family 4 327 7.5E-57 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 3 346 4.5E-114 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 SUPERFAMILY SSF53067 1 169 7.21E-52 T 23-04-2016 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 PANTHER PTHR21060:SF3 1 351 2.7E-120 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 SUPERFAMILY SSF53067 118 341 7.87E-43 T 23-04-2016 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 PIRSF PIRSF036458 1 352 1.9E-121 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 Gene3D G3DSA:3.30.420.40 2 176 4.7E-61 T 23-04-2016 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 Hamap MF_00542 Probable butyrate kinase [buk]. 1 352 112.362 T 23-04-2016 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 PRINTS PR00471 Acetate kinase family signature 293 309 5.7E-19 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 PRINTS PR00471 Acetate kinase family signature 146 159 5.7E-19 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 PRINTS PR00471 Acetate kinase family signature 176 197 5.7E-19 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 PRINTS PR00471 Acetate kinase family signature 270 283 5.7E-19 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 PRINTS PR00471 Acetate kinase family signature 4 15 5.7E-19 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS06790 98e73d31518d1c35b72cc78725dfe46c 352 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 176 193 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 PANTHER PTHR11946 3 611 2.1E-302 T 23-04-2016 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 SUPERFAMILY SSF47323 361 568 7.85E-43 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 532 654 6.8E-40 T 23-04-2016 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 Pfam PF01588 Putative tRNA binding domain 562 652 1.3E-25 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 Gene3D G3DSA:1.10.730.10 348 522 1.6E-48 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 Hamap MF_01228 Methionine--tRNA ligase [metG]. 1 520 50.283 T 23-04-2016 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 Gene3D G3DSA:3.40.50.620 3 114 6.8E-77 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 Gene3D G3DSA:3.40.50.620 236 344 6.8E-77 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 Gene3D G3DSA:2.170.220.10 117 235 3.7E-47 T 23-04-2016 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 Pfam PF09334 tRNA synthetases class I (M) 6 371 1.6E-116 T 23-04-2016 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 SUPERFAMILY SSF50249 555 652 1.3E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 234 245 5.6E-31 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 267 282 5.6E-31 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 5.6E-31 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 359 370 5.6E-31 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 5.6E-31 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 5.6E-31 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 SUPERFAMILY SSF52374 3 358 3.22E-111 T 23-04-2016 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 495 1.6E-168 T 23-04-2016 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 Pfam PF08264 Anticodon-binding domain of tRNA 395 534 9.0E-7 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 PANTHER PTHR11946:SF1 3 611 2.1E-302 T 23-04-2016 SHYC_RS11020 e471219d3842ead454e18d97253ce67f 655 Gene3D G3DSA:2.40.50.140 547 654 3.0E-36 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03695 1f0d192f55bb2a8832b1427838dc15d6 423 SUPERFAMILY SSF55205 1 420 6.15E-137 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SHYC_RS03695 1f0d192f55bb2a8832b1427838dc15d6 423 Gene3D G3DSA:3.65.10.10 21 223 8.9E-61 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHYC_RS03695 1f0d192f55bb2a8832b1427838dc15d6 423 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 418 5.9E-175 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03695 1f0d192f55bb2a8832b1427838dc15d6 423 Gene3D G3DSA:3.65.10.10 224 420 2.5E-63 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHYC_RS03695 1f0d192f55bb2a8832b1427838dc15d6 423 PANTHER PTHR21090:SF19 1 423 3.3E-275 T 23-04-2016 SHYC_RS03695 1f0d192f55bb2a8832b1427838dc15d6 423 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 419 45.255 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03695 1f0d192f55bb2a8832b1427838dc15d6 423 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 409 3.2E-106 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHYC_RS03695 1f0d192f55bb2a8832b1427838dc15d6 423 PANTHER PTHR21090 1 423 3.3E-275 T 23-04-2016 SHYC_RS00095 72823cafe007ad4c3ce734ba6dbeb8fc 137 PANTHER PTHR35344 1 117 1.5E-36 T 23-04-2016 SHYC_RS00095 72823cafe007ad4c3ce734ba6dbeb8fc 137 ProSitePatterns PS00669 Gas vesicles protein GVPa signature 2. 48 61 - T 23-04-2016 IPR018493 Gas vesicle protein GvpA, conserved site GO:0005198|GO:0012506 SHYC_RS00095 72823cafe007ad4c3ce734ba6dbeb8fc 137 PANTHER PTHR35344:SF1 1 117 1.5E-36 T 23-04-2016 SHYC_RS00095 72823cafe007ad4c3ce734ba6dbeb8fc 137 ProSitePatterns PS00234 Gas vesicles protein GVPa signature 1. 15 29 - T 23-04-2016 IPR018493 Gas vesicle protein GvpA, conserved site GO:0005198|GO:0012506 SHYC_RS00095 72823cafe007ad4c3ce734ba6dbeb8fc 137 Pfam PF00741 Gas vesicle protein 14 52 1.0E-15 T 23-04-2016 IPR000638 Gas vesicle protein GvpA GO:0005198|GO:0012506 SHYC_RS02110 0d13c1009622d8a6127c93f578201a8b 382 Gene3D G3DSA:3.50.50.60 261 348 4.6E-5 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02110 0d13c1009622d8a6127c93f578201a8b 382 PANTHER PTHR38663 3 382 4.5E-68 T 23-04-2016 SHYC_RS02110 0d13c1009622d8a6127c93f578201a8b 382 Gene3D G3DSA:3.50.50.60 5 51 2.9E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02110 0d13c1009622d8a6127c93f578201a8b 382 Gene3D G3DSA:3.50.50.60 349 375 2.9E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02110 0d13c1009622d8a6127c93f578201a8b 382 Gene3D G3DSA:3.50.50.60 231 260 2.9E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02110 0d13c1009622d8a6127c93f578201a8b 382 Gene3D G3DSA:3.50.50.60 83 154 2.9E-11 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02110 0d13c1009622d8a6127c93f578201a8b 382 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 294 1.8E-13 T 23-04-2016 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase SHYC_RS02110 0d13c1009622d8a6127c93f578201a8b 382 SUPERFAMILY SSF51905 4 234 6.49E-15 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS10535 ab8dccaff03946aede45544bba46630a 212 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 2 208 8.9E-84 T 23-04-2016 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|UniPathway: UPA00294 SHYC_RS10535 ab8dccaff03946aede45544bba46630a 212 SMART SM00934 2 205 4.2E-33 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS10535 ab8dccaff03946aede45544bba46630a 212 PANTHER PTHR32119 1 211 1.5E-113 T 23-04-2016 SHYC_RS10535 ab8dccaff03946aede45544bba46630a 212 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 204 1.2E-31 T 23-04-2016 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS10535 ab8dccaff03946aede45544bba46630a 212 SUPERFAMILY SSF51366 3 209 1.81E-40 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHYC_RS10535 ab8dccaff03946aede45544bba46630a 212 Gene3D G3DSA:3.20.20.70 1 210 1.1E-66 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS10535 ab8dccaff03946aede45544bba46630a 212 PANTHER PTHR32119:SF3 1 211 1.5E-113 T 23-04-2016 SHYC_RS11510 e90d0dda72089bf8b170c38752b5ce70 144 Pfam PF11181 Heat induced stress protein YflT 13 108 3.8E-15 T 23-04-2016 IPR025889 General stress protein 17M-like domain SHYC_RS11510 e90d0dda72089bf8b170c38752b5ce70 144 ProDom PD458455 UPF0355 MW0363 SE2351 MRSA252 SSP2326 SH2586 SA0372 SAV0387 SACOL0457 SERP0066 9 141 1.0E-21 T 23-04-2016 SHYC_RS03455 c8dd62ad01a00717e76db15bb80d4770 259 Gene3D G3DSA:3.40.50.300 3 241 1.5E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03455 c8dd62ad01a00717e76db15bb80d4770 259 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS03455 c8dd62ad01a00717e76db15bb80d4770 259 PANTHER PTHR24220 4 243 1.3E-86 T 23-04-2016 SHYC_RS03455 c8dd62ad01a00717e76db15bb80d4770 259 PANTHER PTHR24220:SF383 4 243 1.3E-86 T 23-04-2016 SHYC_RS03455 c8dd62ad01a00717e76db15bb80d4770 259 Pfam PF00005 ABC transporter 18 171 2.5E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS03455 c8dd62ad01a00717e76db15bb80d4770 259 SUPERFAMILY SSF52540 2 235 2.77E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03455 c8dd62ad01a00717e76db15bb80d4770 259 SMART SM00382 27 229 4.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 Pfam PF06827 Zinc finger found in FPG and IleRS 881 910 6.7E-7 T 23-04-2016 IPR010663 Zinc finger, FPG/IleRS-type SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 Gene3D G3DSA:3.90.740.10 229 397 1.2E-62 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 831 8.4E-301 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 SUPERFAMILY SSF50677 201 394 8.16E-61 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 PANTHER PTHR11946:SF11 5 249 0.0 T 23-04-2016 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 PANTHER PTHR11946:SF11 273 907 0.0 T 23-04-2016 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 Gene3D G3DSA:3.40.50.620 12 198 6.6E-139 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 Gene3D G3DSA:3.40.50.620 398 629 6.6E-139 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 Gene3D G3DSA:1.10.730.10 634 782 6.6E-43 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 SUPERFAMILY SSF52374 1 200 9.91E-151 T 23-04-2016 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 SUPERFAMILY SSF52374 394 641 9.91E-151 T 23-04-2016 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 PANTHER PTHR11946 5 249 0.0 T 23-04-2016 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 PANTHER PTHR11946 273 907 0.0 T 23-04-2016 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 SUPERFAMILY SSF47323 645 913 1.36E-72 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 912 20.597 T 23-04-2016 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 Pfam PF08264 Anticodon-binding domain of tRNA 678 831 3.8E-29 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 26 634 2.1E-231 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 9.2E-33 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 9.2E-33 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 520 533 9.2E-33 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 554 563 9.2E-33 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SHYC_RS08235 5527035350a2a09d4275aa7366ed1b36 915 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 392 407 9.2E-33 T 23-04-2016 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5|Reactome: REACT_71 SHYC_RS07030 e261e36c122c2d701dcbdc520056c24e 378 Pfam PF13439 Glycosyltransferase Family 4 11 174 5.5E-20 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SHYC_RS07030 e261e36c122c2d701dcbdc520056c24e 378 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 2 371 2.1E-163 T 23-04-2016 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 SHYC_RS07030 e261e36c122c2d701dcbdc520056c24e 378 PANTHER PTHR12526 1 371 5.2E-181 T 23-04-2016 SHYC_RS07030 e261e36c122c2d701dcbdc520056c24e 378 PANTHER PTHR12526:SF336 1 371 5.2E-181 T 23-04-2016 SHYC_RS07030 e261e36c122c2d701dcbdc520056c24e 378 SUPERFAMILY SSF53756 6 372 6.67E-77 T 23-04-2016 SHYC_RS07030 e261e36c122c2d701dcbdc520056c24e 378 Pfam PF00534 Glycosyl transferases group 1 184 344 9.3E-36 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 SHYC_RS07030 e261e36c122c2d701dcbdc520056c24e 378 Gene3D G3DSA:3.40.50.2000 164 345 5.3E-30 T 23-04-2016 SHYC_RS00800 8afbb7d880d809ba47df3c87e0d90280 211 SUPERFAMILY SSF161098 11 196 4.58E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS00800 8afbb7d880d809ba47df3c87e0d90280 211 PANTHER PTHR30177 1 211 9.2E-117 T 23-04-2016 SHYC_RS00800 8afbb7d880d809ba47df3c87e0d90280 211 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 205 5.2E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS00800 8afbb7d880d809ba47df3c87e0d90280 211 Gene3D G3DSA:1.10.3720.10 7 195 2.5E-33 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS00800 8afbb7d880d809ba47df3c87e0d90280 211 PANTHER PTHR30177:SF7 1 211 9.2E-117 T 23-04-2016 SHYC_RS09415 c2fd678e509648b63fc3cf05b84a4ef2 274 Pfam PF01925 Sulfite exporter TauE/SafE 6 267 4.5E-50 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHYC_RS09415 c2fd678e509648b63fc3cf05b84a4ef2 274 PANTHER PTHR30269 1 272 3.5E-78 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHYC_RS09415 c2fd678e509648b63fc3cf05b84a4ef2 274 PANTHER PTHR30269:SF9 1 272 3.5E-78 T 23-04-2016 SHYC_RS07370 7b554f0455e2d78af76d235814ce6a3a 170 Pfam PF01625 Peptide methionine sulfoxide reductase 6 156 1.6E-57 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS07370 7b554f0455e2d78af76d235814ce6a3a 170 PANTHER PTHR10173 2 153 6.6E-55 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SHYC_RS07370 7b554f0455e2d78af76d235814ce6a3a 170 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 155 7.1E-54 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS07370 7b554f0455e2d78af76d235814ce6a3a 170 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 34.718 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS07370 7b554f0455e2d78af76d235814ce6a3a 170 SUPERFAMILY SSF55068 3 157 4.84E-64 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS07370 7b554f0455e2d78af76d235814ce6a3a 170 PANTHER PTHR10173:SF6 2 153 6.6E-55 T 23-04-2016 SHYC_RS07370 7b554f0455e2d78af76d235814ce6a3a 170 Gene3D G3DSA:3.30.1060.10 3 156 2.6E-63 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 Pfam PF01479 S4 domain 357 398 1.3E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 PANTHER PTHR11766:SF3 5 419 2.8E-223 T 23-04-2016 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 SMART SM00363 353 415 0.0099 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 PANTHER PTHR11766 5 419 2.8E-223 T 23-04-2016 IPR024088 Tyrosine-tRNA ligase, bacterial-type GO:0004831 KEGG: 00970+6.1.1.1 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 Pfam PF00579 tRNA synthetases class I (W and Y) 30 324 1.2E-83 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 3 419 45.511 T 23-04-2016 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 419 2.4E-136 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 SUPERFAMILY SSF55174 322 418 4.97E-24 T 23-04-2016 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 Gene3D G3DSA:3.10.290.10 318 419 4.7E-32 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 Gene3D G3DSA:3.40.50.620 3 233 1.6E-100 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 41 51 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 SUPERFAMILY SSF52374 4 324 1.78E-111 T 23-04-2016 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 Gene3D G3DSA:1.10.240.10 234 317 1.3E-44 T 23-04-2016 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 4.9E-30 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 4.9E-30 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 217 229 4.9E-30 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SHYC_RS05790 b9b47c4c8079c191a4e5501b9b60d576 420 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 45 67 4.9E-30 T 23-04-2016 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1|Reactome: REACT_71 SHYC_RS07990 890f9c72344fc38631d048b2f7ee15cb 245 SUPERFAMILY SSF75217 1 242 5.89E-103 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases SHYC_RS07990 890f9c72344fc38631d048b2f7ee15cb 245 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 245 112.262 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHYC_RS07990 890f9c72344fc38631d048b2f7ee15cb 245 PANTHER PTHR32125:SF1 1 226 4.5E-118 T 23-04-2016 SHYC_RS07990 890f9c72344fc38631d048b2f7ee15cb 245 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 219 3.2E-71 T 23-04-2016 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHYC_RS07990 890f9c72344fc38631d048b2f7ee15cb 245 Gene3D G3DSA:3.40.1280.10 1 158 3.9E-68 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHYC_RS07990 890f9c72344fc38631d048b2f7ee15cb 245 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 232 2.7E-99 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHYC_RS07990 890f9c72344fc38631d048b2f7ee15cb 245 PIRSF PIRSF000386 1 245 5.0E-108 T 23-04-2016 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHYC_RS07990 890f9c72344fc38631d048b2f7ee15cb 245 Gene3D G3DSA:1.10.1270.20 159 241 2.1E-36 T 23-04-2016 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 SHYC_RS07990 890f9c72344fc38631d048b2f7ee15cb 245 PANTHER PTHR32125 1 226 4.5E-118 T 23-04-2016 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 21 416 4.1E-119 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 SMART SM01329 20 417 1.2E-181 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 PANTHER PTHR11835:SF52 4 154 7.2E-234 T 23-04-2016 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 PANTHER PTHR11835:SF52 278 421 7.2E-234 T 23-04-2016 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 SUPERFAMILY SSF53659 7 421 1.5E-138 T 23-04-2016 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 306 325 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 Gene3D G3DSA:3.40.718.10 4 421 3.9E-169 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 4 421 5.8E-212 T 23-04-2016 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 PANTHER PTHR11835 4 154 7.2E-234 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 PANTHER PTHR11835 278 421 7.2E-234 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 PANTHER PTHR11835:SF52 178 245 7.2E-234 T 23-04-2016 SHYC_RS05960 39128a56db4c45b375d3577d71b35e32 421 PANTHER PTHR11835 178 245 7.2E-234 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SHYC_RS00615 53d04f0184fa1ab57d951d6660170543 196 SUPERFAMILY SSF46689 6 71 8.72E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS00615 53d04f0184fa1ab57d951d6660170543 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 58 1.9E-7 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHYC_RS00615 53d04f0184fa1ab57d951d6660170543 196 PANTHER PTHR30328 1 185 3.2E-21 T 23-04-2016 SHYC_RS00615 53d04f0184fa1ab57d951d6660170543 196 Gene3D G3DSA:1.10.357.10 5 171 7.8E-20 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHYC_RS00615 53d04f0184fa1ab57d951d6660170543 196 PANTHER PTHR30328:SF20 1 185 3.2E-21 T 23-04-2016 SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 SMART SM00382 287 463 1.5E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 SMART SM00382 28 218 2.8E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 Gene3D G3DSA:3.40.50.300 269 467 1.5E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 ProSitePatterns PS00211 ABC transporters family signature. 387 401 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 Pfam PF00005 ABC transporter 19 169 7.3E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 Pfam PF00005 ABC transporter 283 415 6.6E-27 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 PANTHER PTHR24220:SF193 3 382 7.8E-91 T 23-04-2016 SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 SUPERFAMILY SSF52540 2 220 3.3E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 Gene3D G3DSA:3.40.50.300 1 228 1.0E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 PANTHER PTHR24220 3 382 7.8E-91 T 23-04-2016 SHYC_RS00290 e1d44b5708f2b3eac581f6b85c2794fe 484 SUPERFAMILY SSF52540 262 465 1.51E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06395 c8dd80a9da5ae2053bb5244cac83e781 213 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 153 209 2.5E-19 T 23-04-2016 IPR004509 Competence protein ComEA, helix-hairpin-helix domain SHYC_RS06395 c8dd80a9da5ae2053bb5244cac83e781 213 SMART SM00278 191 210 1.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHYC_RS06395 c8dd80a9da5ae2053bb5244cac83e781 213 SMART SM00278 161 180 0.004 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHYC_RS06395 c8dd80a9da5ae2053bb5244cac83e781 213 Pfam PF10531 SLBB domain 73 127 8.5E-9 T 23-04-2016 IPR019554 Soluble ligand binding domain SHYC_RS06395 c8dd80a9da5ae2053bb5244cac83e781 213 Gene3D G3DSA:1.10.150.320 151 211 2.0E-19 T 23-04-2016 SHYC_RS06395 c8dd80a9da5ae2053bb5244cac83e781 213 Pfam PF12836 Helix-hairpin-helix motif 151 211 2.3E-23 T 23-04-2016 SHYC_RS06395 c8dd80a9da5ae2053bb5244cac83e781 213 SUPERFAMILY SSF47781 139 211 4.34E-25 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SHYC_RS06395 c8dd80a9da5ae2053bb5244cac83e781 213 PANTHER PTHR21180 11 213 1.2E-30 T 23-04-2016 SHYC_RS06395 c8dd80a9da5ae2053bb5244cac83e781 213 Gene3D G3DSA:3.10.560.10 69 123 2.6E-7 T 23-04-2016 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 Gene3D G3DSA:3.90.320.10 983 1208 8.0E-30 T 23-04-2016 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 Gene3D G3DSA:1.10.486.10 595 760 3.9E-18 T 23-04-2016 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 SUPERFAMILY SSF52540 1 150 6.96E-108 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 SUPERFAMILY SSF52540 338 801 6.96E-108 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 SUPERFAMILY SSF52540 843 868 6.96E-108 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 PANTHER PTHR11070 313 729 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 PANTHER PTHR11070 842 1207 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 PANTHER PTHR11070 746 809 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 PANTHER PTHR11070 1 184 0.0 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 PANTHER PTHR11070:SF14 313 729 0.0 T 23-04-2016 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 PANTHER PTHR11070:SF14 842 1207 0.0 T 23-04-2016 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 PANTHER PTHR11070:SF14 746 809 0.0 T 23-04-2016 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 PANTHER PTHR11070:SF14 1 184 0.0 T 23-04-2016 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 Gene3D G3DSA:3.40.50.300 762 872 2.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 Gene3D G3DSA:3.40.50.300 467 593 2.1E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 11 1208 0.0 T 23-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 453 1.7E-74 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 Gene3D G3DSA:3.40.50.300 348 456 6.1E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 Gene3D G3DSA:3.40.50.300 11 167 6.1E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 9 1212 16.9 T 23-04-2016 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1020 1205 3.3E-8 T 23-04-2016 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 Pfam PF13361 UvrD-like helicase C-terminal domain 463 865 4.4E-31 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHYC_RS09200 cc91e804512223661f09f8ff5ba10737 1212 SUPERFAMILY SSF52980 994 1207 6.17E-36 T 23-04-2016 IPR011335 Restriction endonuclease type II-like SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 SUPERFAMILY SSF53850 2 216 3.36E-77 T 23-04-2016 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 SUPERFAMILY SSF54782 219 306 9.29E-21 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 9.0E-105 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 PANTHER PTHR11557:SF0 1 306 2.1E-146 T 23-04-2016 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 2.9E-73 T 23-04-2016 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 PIRSF PIRSF001438 1 308 1.5E-114 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 Gene3D G3DSA:3.40.190.10 109 198 1.7E-35 T 23-04-2016 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 23-04-2016 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 1.1E-48 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 1.1E-48 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 1.1E-48 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.1E-48 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 1.1E-48 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 37.55 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 225 293 2.4E-20 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 PANTHER PTHR11557 1 306 2.1E-146 T 23-04-2016 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 Gene3D G3DSA:3.40.190.10 2 108 1.5E-41 T 23-04-2016 SHYC_RS06070 e2f7316b1b600923445f9488b197d783 308 Gene3D G3DSA:3.30.160.40 222 302 3.9E-22 T 23-04-2016 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS09840 f9deddd846740dc60ccfa62708f074f0 309 SMART SM00046 7 139 6.1E-4 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SHYC_RS09840 f9deddd846740dc60ccfa62708f074f0 309 PANTHER PTHR12358 38 304 1.5E-46 T 23-04-2016 SHYC_RS09840 f9deddd846740dc60ccfa62708f074f0 309 SUPERFAMILY SSF111331 9 305 2.4E-60 T 23-04-2016 IPR016064 NAD kinase/diacylglycerol kinase-like domain SHYC_RS09840 f9deddd846740dc60ccfa62708f074f0 309 Gene3D G3DSA:3.40.50.10330 43 102 3.9E-4 T 23-04-2016 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269 SHYC_RS09840 f9deddd846740dc60ccfa62708f074f0 309 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 135 9.5E-26 T 23-04-2016 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 SHYC_RS09840 f9deddd846740dc60ccfa62708f074f0 309 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 9 300 3.9E-48 T 23-04-2016 IPR005218 Diacylglycerol/lipid kinase SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 Pfam PF00117 Glutamine amidotransferase class-I 4 187 3.2E-44 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00097 Anthranilate synthase component II signature 165 178 2.1E-31 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00097 Anthranilate synthase component II signature 120 132 2.1E-31 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00097 Anthranilate synthase component II signature 75 86 2.1E-31 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00097 Anthranilate synthase component II signature 2 16 2.1E-31 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00097 Anthranilate synthase component II signature 100 108 2.1E-31 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00097 Anthranilate synthase component II signature 48 57 2.1E-31 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 6.7E-14 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 75 86 6.7E-14 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 6.7E-14 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 SUPERFAMILY SSF52317 1 188 5.2E-49 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PANTHER PTHR11922 1 190 2.0E-66 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 1.0E-57 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 Gene3D G3DSA:3.40.50.880 1 187 1.8E-57 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PANTHER PTHR11922:SF7 1 190 2.0E-66 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 75 91 1.5E-6 T 23-04-2016 SHYC_RS09910 f69277cd539e656008b57180cee9b6c9 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 1.5E-6 T 23-04-2016 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 SUPERFAMILY SSF51735 1 191 1.97E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 SUPERFAMILY SSF52413 296 401 4.45E-25 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 285 4.9E-23 T 23-04-2016 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 397 4.9E-136 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 Gene3D G3DSA:3.40.50.720 1 219 2.5E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 309 400 4.9E-21 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 PIRSF PIRSF000124 1 411 1.7E-74 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 PIRSF PIRSF500136 1 417 5.7E-159 T 23-04-2016 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 178 4.1E-56 T 23-04-2016 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 PANTHER PTHR11374:SF4 1 418 3.3E-174 T 23-04-2016 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 Gene3D G3DSA:3.40.50.720 230 402 6.0E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 SMART SM00984 308 401 2.4E-25 T 23-04-2016 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 SUPERFAMILY SSF48179 198 291 8.84E-26 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS08850 28d4c62cfd6578c35f170bc17992fc5d 421 PANTHER PTHR11374 1 418 3.3E-174 T 23-04-2016 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 Gene3D G3DSA:3.40.50.670 413 625 1.2E-82 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 SUPERFAMILY SSF56719 402 638 6.28E-84 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 7 642 49.268 T 23-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 574 633 6.2E-29 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 SMART SM00387 34 178 4.1E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PANTHER PTHR10169:SF44 8 663 0.0 T 23-04-2016 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 SUPERFAMILY SSF54211 226 397 1.04E-51 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 Gene3D G3DSA:3.30.230.10 225 396 4.0E-64 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR01159 DNA gyrase subunit B signature 184 199 4.4E-56 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR01159 DNA gyrase subunit B signature 199 212 4.4E-56 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR01159 DNA gyrase subunit B signature 316 332 4.4E-56 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR01159 DNA gyrase subunit B signature 380 400 4.4E-56 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR01159 DNA gyrase subunit B signature 366 380 4.4E-56 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR01159 DNA gyrase subunit B signature 613 629 4.4E-56 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR01159 DNA gyrase subunit B signature 9 19 4.4E-56 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR01159 DNA gyrase subunit B signature 478 487 4.4E-56 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR01159 DNA gyrase subunit B signature 225 247 4.4E-56 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR01159 DNA gyrase subunit B signature 597 609 4.4E-56 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR00418 DNA topoisomerase II family signature 494 510 1.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR00418 DNA topoisomerase II family signature 73 86 1.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR00418 DNA topoisomerase II family signature 532 544 1.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR00418 DNA topoisomerase II family signature 428 442 1.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR00418 DNA topoisomerase II family signature 272 285 1.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR00418 DNA topoisomerase II family signature 512 529 1.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR00418 DNA topoisomerase II family signature 115 129 1.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR00418 DNA topoisomerase II family signature 576 592 1.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PRINTS PR00418 DNA topoisomerase II family signature 38 53 1.1E-68 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 Gene3D G3DSA:3.30.565.10 9 218 1.8E-87 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 Pfam PF00204 DNA gyrase B 226 396 2.7E-58 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 SUPERFAMILY SSF55874 9 218 3.8E-65 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 ProSitePatterns PS00177 DNA topoisomerase II signature. 430 438 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 SMART SM00433 38 637 0.0 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 7 645 0.0 T 23-04-2016 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 PANTHER PTHR10169 8 663 0.0 T 23-04-2016 SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 177 9.8E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07405 5bc28dbcaaeb19a3eea8f1e9f90c1378 664 Pfam PF01751 Toprim domain 427 537 5.4E-17 T 23-04-2016 IPR006171 Toprim domain SHYC_RS08695 09f02d90573d3f15f91b0b11ee74358f 194 Pfam PF09819 ABC-type cobalt transport system, permease component 12 128 7.8E-29 T 23-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted SHYC_RS08695 09f02d90573d3f15f91b0b11ee74358f 194 PIRSF PIRSF037394 1 194 2.0E-56 T 23-04-2016 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted SHYC_RS08465 f204bec9a8067c61502380fb7411112c 183 Gene3D G3DSA:3.40.50.150 1 179 1.8E-52 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS08465 f204bec9a8067c61502380fb7411112c 183 PANTHER PTHR18895:SF60 1 148 2.2E-39 T 23-04-2016 SHYC_RS08465 f204bec9a8067c61502380fb7411112c 183 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 176 6.6E-47 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS08465 f204bec9a8067c61502380fb7411112c 183 PANTHER PTHR18895 1 148 2.2E-39 T 23-04-2016 SHYC_RS08465 f204bec9a8067c61502380fb7411112c 183 Pfam PF03602 Conserved hypothetical protein 95 1 175 1.0E-52 T 23-04-2016 SHYC_RS08465 f204bec9a8067c61502380fb7411112c 183 PIRSF PIRSF004553 1 179 1.1E-44 T 23-04-2016 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS08465 f204bec9a8067c61502380fb7411112c 183 SUPERFAMILY SSF53335 1 172 7.95E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS08465 f204bec9a8067c61502380fb7411112c 183 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 115 121 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHYC_RS01690 9281a7af2e827a44200987ebe56d6fb2 116 Pfam PF03831 PhnA domain 46 115 5.8E-33 T 23-04-2016 IPR013988 PhnA protein, C-terminal SHYC_RS01690 9281a7af2e827a44200987ebe56d6fb2 116 SUPERFAMILY SSF57783 4 38 4.59E-14 T 23-04-2016 SHYC_RS01690 9281a7af2e827a44200987ebe56d6fb2 116 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 5 114 5.1E-42 T 23-04-2016 IPR004624 PhnA protein SHYC_RS01690 9281a7af2e827a44200987ebe56d6fb2 116 PANTHER PTHR30305 3 115 1.7E-66 T 23-04-2016 SHYC_RS01690 9281a7af2e827a44200987ebe56d6fb2 116 SUPERFAMILY SSF82057 41 115 5.49E-26 T 23-04-2016 SHYC_RS01690 9281a7af2e827a44200987ebe56d6fb2 116 Gene3D G3DSA:2.20.25.10 4 42 1.4E-21 T 23-04-2016 SHYC_RS01690 9281a7af2e827a44200987ebe56d6fb2 116 Pfam PF08274 PhnA Zinc-Ribbon 4 33 2.3E-16 T 23-04-2016 IPR013987 PhnA protein, N-terminal SHYC_RS01690 9281a7af2e827a44200987ebe56d6fb2 116 Gene3D G3DSA:2.30.30.40 45 115 2.9E-34 T 23-04-2016 SHYC_RS00280 79bdc030ad8be3ae78b3357cc2e87e04 192 Pfam PF09605 Hypothetical bacterial integral membrane protein (Trep_Strep) 6 188 1.6E-59 T 23-04-2016 IPR011733 Conserved hypothetical CHP02185, integral membrane SHYC_RS00280 79bdc030ad8be3ae78b3357cc2e87e04 192 TIGRFAM TIGR02185 Trep_Strep: putative ECF transporter S component, Trep_Strep family 4 188 2.0E-38 T 23-04-2016 IPR011733 Conserved hypothetical CHP02185, integral membrane SHYC_RS10990 d94e3ba8e8b9383733ced9268711c1f8 275 Gene3D G3DSA:3.40.50.2020 84 265 9.4E-52 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS10990 d94e3ba8e8b9383733ced9268711c1f8 275 SUPERFAMILY SSF46785 2 73 3.54E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10990 d94e3ba8e8b9383733ced9268711c1f8 275 Pfam PF00156 Phosphoribosyl transferase domain 108 263 1.0E-20 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHYC_RS10990 d94e3ba8e8b9383733ced9268711c1f8 275 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 269 1.1E-110 T 23-04-2016 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 SHYC_RS10990 d94e3ba8e8b9383733ced9268711c1f8 275 PANTHER PTHR11776:SF9 48 267 7.4E-119 T 23-04-2016 SHYC_RS10990 d94e3ba8e8b9383733ced9268711c1f8 275 Gene3D G3DSA:1.10.10.10 1 73 3.4E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10990 d94e3ba8e8b9383733ced9268711c1f8 275 SUPERFAMILY SSF53271 93 260 4.69E-35 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS10990 d94e3ba8e8b9383733ced9268711c1f8 275 Pfam PF09182 Bacterial purine repressor, N-terminal 4 73 5.6E-31 T 23-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 SHYC_RS10990 d94e3ba8e8b9383733ced9268711c1f8 275 PANTHER PTHR11776 48 267 7.4E-119 T 23-04-2016 SHYC_RS10990 d94e3ba8e8b9383733ced9268711c1f8 275 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 10 73 3.0E-23 T 23-04-2016 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 SHYC_RS09435 f2077c1bad7c291ba99ea65dd82b01a0 149 Gene3D G3DSA:3.90.1010.10 8 145 2.3E-44 T 23-04-2016 SHYC_RS09435 f2077c1bad7c291ba99ea65dd82b01a0 149 PANTHER PTHR10093 1 138 1.9E-50 T 23-04-2016 SHYC_RS09435 f2077c1bad7c291ba99ea65dd82b01a0 149 Pfam PF01592 NifU-like N terminal domain 10 128 3.9E-33 T 23-04-2016 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 SHYC_RS09435 f2077c1bad7c291ba99ea65dd82b01a0 149 SUPERFAMILY SSF82649 3 138 1.11E-50 T 23-04-2016 SHYC_RS09435 f2077c1bad7c291ba99ea65dd82b01a0 149 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 138 8.0E-55 T 23-04-2016 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 SUPERFAMILY SSF52540 4 167 5.95E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 1.7E-27 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 Pfam PF01926 50S ribosome-binding GTPase 178 295 1.2E-26 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 PIRSF PIRSF006485 2 436 1.9E-177 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 Gene3D G3DSA:3.40.50.300 3 166 5.9E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 Gene3D G3DSA:3.40.50.300 172 358 1.6E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 PANTHER PTHR11649 1 436 5.3E-153 T 23-04-2016 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 Gene3D G3DSA:3.30.300.20 359 435 1.0E-36 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 Hamap MF_00195 GTPase Der [der]. 3 436 40.84 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 SUPERFAMILY SSF52540 138 435 2.41E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 178 198 4.9E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 248 266 4.9E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 175 338 8.4E-26 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 125 1.7E-24 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 9.5E-33 T 23-04-2016 IPR032859 GTPase Der, C-terminal KH-domain-like SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 5.8E-181 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SHYC_RS06955 18d4e2249507cb53fca4613672fe3453 436 PANTHER PTHR11649:SF5 1 436 5.3E-153 T 23-04-2016 IPR016484 GTP-binding protein EngA GO:0005525 SHYC_RS01850 90d6043cc5c862a70d4a87eecf56e028 302 PANTHER PTHR10464:SF7 9 295 6.0E-69 T 23-04-2016 SHYC_RS01850 90d6043cc5c862a70d4a87eecf56e028 302 PANTHER PTHR10464 9 295 6.0E-69 T 23-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 SHYC_RS01850 90d6043cc5c862a70d4a87eecf56e028 302 TIGRFAM TIGR03441 urea_trans_yut: urea transporter 5 293 6.9E-88 T 23-04-2016 IPR017807 Urea transporter, bacteria GO:0015204|GO:0016021|GO:0071918 SHYC_RS01850 90d6043cc5c862a70d4a87eecf56e028 302 Gene3D G3DSA:1.10.3430.10 4 297 1.8E-75 T 23-04-2016 IPR029020 Ammonium/urea transporter SHYC_RS01850 90d6043cc5c862a70d4a87eecf56e028 302 PIRSF PIRSF016502 1 301 4.1E-72 T 23-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 SHYC_RS01850 90d6043cc5c862a70d4a87eecf56e028 302 Pfam PF03253 Urea transporter 6 294 5.6E-75 T 23-04-2016 IPR004937 Urea transporter GO:0015204|GO:0016021|GO:0071918 Reactome: REACT_15518|Reactome: REACT_20679 SHYC_RS05780 67071b1992a58497ee29a52fc4a69501 555 Gene3D G3DSA:3.10.410.10 442 531 2.1E-40 T 23-04-2016 SHYC_RS05780 67071b1992a58497ee29a52fc4a69501 555 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 3 555 48.322 T 23-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SHYC_RS05780 67071b1992a58497ee29a52fc4a69501 555 PANTHER PTHR10025 5 554 0.0 T 23-04-2016 SHYC_RS05780 67071b1992a58497ee29a52fc4a69501 555 Gene3D G3DSA:3.40.50.300 15 128 2.4E-143 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05780 67071b1992a58497ee29a52fc4a69501 555 Gene3D G3DSA:3.40.50.300 248 440 2.4E-143 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05780 67071b1992a58497ee29a52fc4a69501 555 Pfam PF01268 Formate--tetrahydrofolate ligase 5 555 7.9E-264 T 23-04-2016 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SHYC_RS05780 67071b1992a58497ee29a52fc4a69501 555 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 328 339 - T 23-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SHYC_RS05780 67071b1992a58497ee29a52fc4a69501 555 Gene3D G3DSA:3.30.1510.10 129 246 3.7E-54 T 23-04-2016 SHYC_RS05780 67071b1992a58497ee29a52fc4a69501 555 SUPERFAMILY SSF52540 6 553 7.44E-239 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05780 67071b1992a58497ee29a52fc4a69501 555 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 103 113 - T 23-04-2016 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0004329|GO:0005524|GO:0009396 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SHYC_RS10100 8d252a5ec35b87e8f0039755fb88200c 187 PANTHER PTHR41271:SF1 1 176 7.1E-43 T 23-04-2016 SHYC_RS10100 8d252a5ec35b87e8f0039755fb88200c 187 Pfam PF04167 Protein of unknown function (DUF402) 62 128 1.3E-16 T 23-04-2016 IPR007295 Domain of unknown function DUF402 SHYC_RS10100 8d252a5ec35b87e8f0039755fb88200c 187 PANTHER PTHR41271 1 176 7.1E-43 T 23-04-2016 SHYC_RS10100 8d252a5ec35b87e8f0039755fb88200c 187 SUPERFAMILY SSF159234 1 158 1.44E-29 T 23-04-2016 SHYC_RS10100 8d252a5ec35b87e8f0039755fb88200c 187 Gene3D G3DSA:2.40.380.10 28 157 2.4E-18 T 23-04-2016 IPR007295 Domain of unknown function DUF402 SHYC_RS02595 05242286d47ecbf840ca816457cda2b7 343 PANTHER PTHR40063 2 338 8.3E-97 T 23-04-2016 SHYC_RS02595 05242286d47ecbf840ca816457cda2b7 343 Pfam PF13303 Phosphotransferase system, EIIC 28 336 5.3E-61 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS03525 9a9cef55bdccaa2925ae1d2f934cdc0d 393 Gene3D G3DSA:3.30.470.20 120 305 1.8E-8 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS03525 9a9cef55bdccaa2925ae1d2f934cdc0d 393 PANTHER PTHR37018 5 393 2.2E-166 T 23-04-2016 SHYC_RS03525 9a9cef55bdccaa2925ae1d2f934cdc0d 393 SUPERFAMILY SSF56059 122 310 3.73E-18 T 23-04-2016 SHYC_RS03525 9a9cef55bdccaa2925ae1d2f934cdc0d 393 PANTHER PTHR37018:SF2 5 393 2.2E-166 T 23-04-2016 SHYC_RS09180 6059cb130bd326b302baac73dc9121e2 274 SUPERFAMILY SSF56784 1 266 6.09E-66 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS09180 6059cb130bd326b302baac73dc9121e2 274 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 260 2.4E-62 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS09180 6059cb130bd326b302baac73dc9121e2 274 Gene3D G3DSA:3.40.50.1000 169 268 6.0E-55 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS09180 6059cb130bd326b302baac73dc9121e2 274 Gene3D G3DSA:3.40.50.1000 1 73 6.0E-55 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS09180 6059cb130bd326b302baac73dc9121e2 274 PANTHER PTHR10000 1 268 2.9E-115 T 23-04-2016 SHYC_RS09180 6059cb130bd326b302baac73dc9121e2 274 PANTHER PTHR10000:SF23 1 268 2.9E-115 T 23-04-2016 SHYC_RS09180 6059cb130bd326b302baac73dc9121e2 274 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 261 1.2E-61 T 23-04-2016 IPR000150 Cof protein GO:0016787 SHYC_RS09180 6059cb130bd326b302baac73dc9121e2 274 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 235 7.5E-26 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SHYC_RS09180 6059cb130bd326b302baac73dc9121e2 274 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 23-04-2016 IPR000150 Cof protein GO:0016787 SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 SUPERFAMILY SSF52540 470 594 8.18E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 SMART SM00487 10 426 6.1E-28 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Hamap MF_00204 UvrABC system protein B [uvrB]. 4 659 44.348 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 SMART SM00490 460 546 4.1E-21 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 SUPERFAMILY SSF52540 33 81 8.18E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Gene3D G3DSA:3.40.50.300 389 410 7.2E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Gene3D G3DSA:3.40.50.300 279 339 7.2E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Gene3D G3DSA:3.40.50.300 7 90 7.2E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 SUPERFAMILY SSF46600 616 658 1.27E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Pfam PF12344 Ultra-violet resistance protein B 552 593 7.8E-25 T 23-04-2016 IPR024759 UvrB, YAD/RRR-motif-containing domain SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Gene3D G3DSA:4.10.860.10 610 658 8.5E-14 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 PANTHER PTHR24029 1 659 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Pfam PF04851 Type III restriction enzyme, res subunit 14 139 3.8E-11 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 6 657 0.0 T 23-04-2016 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Pfam PF02151 UvrB/uvrC motif 624 658 5.5E-9 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Pfam PF00271 Helicase conserved C-terminal domain 432 545 3.0E-22 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 SUPERFAMILY SSF52540 5 415 7.47E-142 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Gene3D G3DSA:3.40.50.300 419 581 1.2E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09690 c7127e9b521e33a1bba8b33ad6fa2ab2 660 Gene3D G3DSA:3.30.2060.10 160 229 2.7E-11 T 23-04-2016 SHYC_RS00265 6bb89adbca6d314a76309932327e50db 704 PANTHER PTHR11712 472 638 1.4E-18 T 23-04-2016 SHYC_RS00265 6bb89adbca6d314a76309932327e50db 704 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 117 8.5E-15 T 23-04-2016 IPR000683 Oxidoreductase, N-terminal GO:0016491 SHYC_RS00265 6bb89adbca6d314a76309932327e50db 704 Gene3D G3DSA:3.40.50.720 4 130 1.3E-10 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS00265 6bb89adbca6d314a76309932327e50db 704 Pfam PF08242 Methyltransferase domain 528 629 2.0E-13 T 23-04-2016 IPR013217 Methyltransferase type 12 SHYC_RS00265 6bb89adbca6d314a76309932327e50db 704 SUPERFAMILY SSF53335 504 690 5.98E-24 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS00265 6bb89adbca6d314a76309932327e50db 704 TIGRFAM TIGR01761 thiaz-red: thiazolinyl imide reductase 2 336 7.6E-58 T 23-04-2016 IPR010091 Thiazolinyl imide reductase SHYC_RS00265 6bb89adbca6d314a76309932327e50db 704 Gene3D G3DSA:3.40.50.150 496 681 6.6E-28 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS00265 6bb89adbca6d314a76309932327e50db 704 PANTHER PTHR11712:SF278 472 638 1.4E-18 T 23-04-2016 SHYC_RS00265 6bb89adbca6d314a76309932327e50db 704 SUPERFAMILY SSF51735 8 132 6.83E-12 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS03620 97ac1ace06845896e43635d7cfb8b391 139 PANTHER PTHR11717 1 138 1.2E-28 T 23-04-2016 SHYC_RS03620 97ac1ace06845896e43635d7cfb8b391 139 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 4.9E-10 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SHYC_RS03620 97ac1ace06845896e43635d7cfb8b391 139 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 109 124 4.9E-10 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SHYC_RS03620 97ac1ace06845896e43635d7cfb8b391 139 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 71 86 4.9E-10 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SHYC_RS03620 97ac1ace06845896e43635d7cfb8b391 139 SMART SM00226 1 137 1.1E-22 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHYC_RS03620 97ac1ace06845896e43635d7cfb8b391 139 PANTHER PTHR11717:SF14 1 138 1.2E-28 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SHYC_RS03620 97ac1ace06845896e43635d7cfb8b391 139 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 131 6.0E-27 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHYC_RS03620 97ac1ace06845896e43635d7cfb8b391 139 Gene3D G3DSA:3.40.50.270 1 138 7.7E-32 T 23-04-2016 SHYC_RS03620 97ac1ace06845896e43635d7cfb8b391 139 SUPERFAMILY SSF52788 1 136 1.18E-28 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHYC_RS00125 83f2f6a1d54bc8062dfdfa69410743fe 321 Gene3D G3DSA:3.40.50.1820 21 314 2.5E-24 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00125 83f2f6a1d54bc8062dfdfa69410743fe 321 PANTHER PTHR32268 9 315 9.7E-82 T 23-04-2016 SHYC_RS00125 83f2f6a1d54bc8062dfdfa69410743fe 321 SUPERFAMILY SSF53474 6 315 5.12E-56 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00125 83f2f6a1d54bc8062dfdfa69410743fe 321 Pfam PF00561 alpha/beta hydrolase fold 38 302 1.8E-12 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SHYC_RS00125 83f2f6a1d54bc8062dfdfa69410743fe 321 PIRSF PIRSF000443 2 320 5.5E-76 T 23-04-2016 IPR008220 Homoserine acetyltransferase GO:0004414|GO:0005737|GO:0009086 KEGG: 00270+2.3.1.31|MetaCyc: PWY-5344|UniPathway: UPA00051 SHYC_RS05295 0b7fc19062deed9922046101cb917118 768 SUPERFAMILY SSF49401 145 288 1.49E-29 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS05295 0b7fc19062deed9922046101cb917118 768 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 299 444 3.1E-26 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS05295 0b7fc19062deed9922046101cb917118 768 Gene3D G3DSA:2.60.40.1290 312 465 1.1E-30 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS05295 0b7fc19062deed9922046101cb917118 768 Pfam PF04650 YSIRK type signal peptide 3 26 7.2E-9 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS05295 0b7fc19062deed9922046101cb917118 768 Gene3D G3DSA:2.60.40.1280 145 311 5.3E-38 T 23-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 SHYC_RS05295 0b7fc19062deed9922046101cb917118 768 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 2 38 6.5E-8 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS05295 0b7fc19062deed9922046101cb917118 768 SUPERFAMILY SSF49401 297 461 1.3E-32 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS05295 0b7fc19062deed9922046101cb917118 768 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 732 763 0.0017 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain SHYC_RS07745 54f186b4267fa3e82eaef2622cc06b5a 387 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 289 8.1E-91 T 23-04-2016 IPR008135 Competence-induced protein CinA SHYC_RS07745 54f186b4267fa3e82eaef2622cc06b5a 387 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 166 4.2E-32 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS07745 54f186b4267fa3e82eaef2622cc06b5a 387 PANTHER PTHR13939 1 283 1.9E-114 T 23-04-2016 SHYC_RS07745 54f186b4267fa3e82eaef2622cc06b5a 387 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 387 95.356 T 23-04-2016 IPR008135 Competence-induced protein CinA SHYC_RS07745 54f186b4267fa3e82eaef2622cc06b5a 387 SMART SM00852 4 170 2.6E-33 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS07745 54f186b4267fa3e82eaef2622cc06b5a 387 Pfam PF00994 Probable molybdopterin binding domain 5 167 1.9E-34 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS07745 54f186b4267fa3e82eaef2622cc06b5a 387 PANTHER PTHR13939:SF0 1 283 1.9E-114 T 23-04-2016 SHYC_RS07745 54f186b4267fa3e82eaef2622cc06b5a 387 Gene3D G3DSA:3.40.980.10 1 207 4.7E-35 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS07745 54f186b4267fa3e82eaef2622cc06b5a 387 SUPERFAMILY SSF53218 1 203 1.44E-37 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS05640 adb7078ce6c8a4569023c8f731911b65 319 Pfam PF16199 Radical_SAM C-terminal domain 218 301 1.1E-25 T 23-04-2016 IPR032432 Radical SAM, C-terminal extension SHYC_RS05640 adb7078ce6c8a4569023c8f731911b65 319 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 13 311 3.5E-134 T 23-04-2016 IPR005911 Protein YhcC-like GO:0051536 SHYC_RS05640 adb7078ce6c8a4569023c8f731911b65 319 PANTHER PTHR11135 10 310 7.1E-164 T 23-04-2016 SHYC_RS05640 adb7078ce6c8a4569023c8f731911b65 319 Pfam PF04055 Radical SAM superfamily 50 211 4.0E-16 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS05640 adb7078ce6c8a4569023c8f731911b65 319 Gene3D G3DSA:3.80.30.20 37 257 3.9E-30 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHYC_RS05640 adb7078ce6c8a4569023c8f731911b65 319 PANTHER PTHR11135:SF1 10 310 7.1E-164 T 23-04-2016 IPR005911 Protein YhcC-like GO:0051536 SHYC_RS05640 adb7078ce6c8a4569023c8f731911b65 319 SUPERFAMILY SSF102114 4 306 5.89E-54 T 23-04-2016 SHYC_RS05640 adb7078ce6c8a4569023c8f731911b65 319 SMART SM00729 30 257 2.8E-40 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHYC_RS01205 32c389bc2eb3ca9d97db954cba793304 667 PANTHER PTHR10110:SF120 1 667 6.2E-174 T 23-04-2016 SHYC_RS01205 32c389bc2eb3ca9d97db954cba793304 667 PANTHER PTHR10110 1 667 6.2E-174 T 23-04-2016 IPR018422 Cation/H+ exchanger, CPA1 family GO:0006812|GO:0015299|GO:0016021 Reactome: REACT_15518 SHYC_RS01205 32c389bc2eb3ca9d97db954cba793304 667 Pfam PF00999 Sodium/hydrogen exchanger family 10 421 6.9E-49 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:3.30.1490.20 202 249 9.1E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:3.30.1490.20 132 155 9.1E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 6 923 0.0 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Pfam PF00005 ABC transporter 622 858 2.0E-7 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:1.20.1580.10 93 131 1.3E-55 T 23-04-2016 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:1.20.1580.10 250 283 1.3E-55 T 23-04-2016 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:1.20.1580.10 407 477 1.3E-55 T 23-04-2016 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 PANTHER PTHR32282 2 947 0.0 T 23-04-2016 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:3.40.50.300 3 91 2.6E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:3.40.50.300 819 942 3.4E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:3.40.50.300 478 595 2.6E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:3.40.50.300 603 667 3.4E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:1.20.1580.10 692 818 2.6E-57 T 23-04-2016 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 PANTHER PTHR32282:SF2 2 947 0.0 T 23-04-2016 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Gene3D G3DSA:1.10.8.280 285 406 4.8E-42 T 23-04-2016 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.068 T 23-04-2016 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 SUPERFAMILY SSF52540 12 206 2.26E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 SUPERFAMILY SSF52540 430 569 2.26E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09685 299670bbdb0113e2999fcbb45b8fd425 947 SUPERFAMILY SSF52540 614 912 1.9E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 Gene3D G3DSA:2.70.98.10 446 689 1.1E-73 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 PANTHER PTHR38481 182 797 6.6E-153 T 23-04-2016 SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 PANTHER PTHR38481 48 163 6.6E-153 T 23-04-2016 SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 SUPERFAMILY SSF49863 699 781 1.88E-19 T 23-04-2016 IPR011071 Polysaccharide lyase family 8-like, C-terminal GO:0005975 SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 Gene3D G3DSA:2.60.220.10 691 776 1.7E-23 T 23-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 SUPERFAMILY SSF74650 440 704 2.04E-78 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 Pfam PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain 701 767 1.6E-7 T 23-04-2016 IPR004103 Polysaccharide lyase family 8, C-terminal GO:0005576|GO:0016829 SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 Gene3D G3DSA:1.50.10.100 42 436 6.1E-106 T 23-04-2016 IPR012329 Polysaccharide lyase family 8, N-terminal GO:0005975|GO:0016837 SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 Pfam PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain 55 402 9.3E-89 T 23-04-2016 IPR012970 Polysaccharide lyase 8, N-terminal alpha-helical SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 SUPERFAMILY SSF48230 46 436 1.68E-102 T 23-04-2016 IPR008929 Chondroitin AC/alginate lyase SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 Pfam PF02278 Polysaccharide lyase family 8, super-sandwich domain 444 687 7.5E-66 T 23-04-2016 IPR003159 Polysaccharide lyase family 8, central domain GO:0005576|GO:0016829 SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 PANTHER PTHR38481:SF1 182 797 6.6E-153 T 23-04-2016 SHYC_RS11435 c7cb0cea4a564af889793b2d9577b6eb 799 PANTHER PTHR38481:SF1 48 163 6.6E-153 T 23-04-2016 SHYC_RS01240 3ee705c51f6f6d7009c53761f222dc06 190 Gene3D G3DSA:3.40.50.2300 3 124 5.1E-34 T 23-04-2016 SHYC_RS01240 3ee705c51f6f6d7009c53761f222dc06 190 SUPERFAMILY SSF52172 2 185 8.4E-50 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS01240 3ee705c51f6f6d7009c53761f222dc06 190 PANTHER PTHR26402 3 118 1.8E-33 T 23-04-2016 SHYC_RS01240 3ee705c51f6f6d7009c53761f222dc06 190 SMART SM01012 130 185 9.0E-14 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 SHYC_RS01240 3ee705c51f6f6d7009c53761f222dc06 190 Pfam PF00072 Response regulator receiver domain 5 113 2.2E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS01240 3ee705c51f6f6d7009c53761f222dc06 190 Pfam PF03861 ANTAR domain 135 185 4.0E-16 T 23-04-2016 IPR005561 ANTAR domain GO:0003723 SHYC_RS01240 3ee705c51f6f6d7009c53761f222dc06 190 PIRSF PIRSF036382 1 190 2.4E-58 T 23-04-2016 IPR008327 Signal transduction response regulator, antiterminator SHYC_RS01240 3ee705c51f6f6d7009c53761f222dc06 190 SMART SM00448 3 114 1.4E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS01240 3ee705c51f6f6d7009c53761f222dc06 190 Gene3D G3DSA:1.10.10.10 137 188 1.3E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07645 77142db5aef2cccc48726e609941756e 310 Gene3D G3DSA:3.40.50.1820 24 150 2.4E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS07645 77142db5aef2cccc48726e609941756e 310 Gene3D G3DSA:3.40.50.1820 182 304 2.4E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS07645 77142db5aef2cccc48726e609941756e 310 Pfam PF12146 Serine aminopeptidase, S33 28 288 1.4E-52 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 SHYC_RS07645 77142db5aef2cccc48726e609941756e 310 PANTHER PTHR11614 27 304 2.7E-38 T 23-04-2016 SHYC_RS07645 77142db5aef2cccc48726e609941756e 310 PANTHER PTHR11614:SF87 27 304 2.7E-38 T 23-04-2016 SHYC_RS07645 77142db5aef2cccc48726e609941756e 310 SUPERFAMILY SSF53474 29 300 1.54E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS08920 3f9d005e19fcd242010318e40631d1be 215 Pfam PF00005 ABC transporter 17 160 7.8E-36 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS08920 3f9d005e19fcd242010318e40631d1be 215 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS08920 3f9d005e19fcd242010318e40631d1be 215 PANTHER PTHR24220 3 215 6.6E-76 T 23-04-2016 SHYC_RS08920 3f9d005e19fcd242010318e40631d1be 215 SUPERFAMILY SSF52540 2 212 4.66E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08920 3f9d005e19fcd242010318e40631d1be 215 Gene3D G3DSA:3.40.50.300 1 214 2.7E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08920 3f9d005e19fcd242010318e40631d1be 215 SMART SM00382 26 208 1.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS07495 4637d05784087adc1893eb5e773448b8 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 5.0E-28 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07495 4637d05784087adc1893eb5e773448b8 89 PANTHER PTHR19836 1 89 3.4E-65 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07495 4637d05784087adc1893eb5e773448b8 89 SUPERFAMILY SSF57716 2 89 7.84E-32 T 23-04-2016 SHYC_RS07495 4637d05784087adc1893eb5e773448b8 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 25.359 T 23-04-2016 IPR023036 Ribosomal protein S14, bacterial/plastid SHYC_RS07495 4637d05784087adc1893eb5e773448b8 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 50 73 - T 23-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 SHYC_RS07495 4637d05784087adc1893eb5e773448b8 89 PANTHER PTHR19836:SF20 1 89 3.4E-65 T 23-04-2016 SHYC_RS07495 4637d05784087adc1893eb5e773448b8 89 Gene3D G3DSA:4.10.830.10 35 89 2.9E-30 T 23-04-2016 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 302 8.4E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 SUPERFAMILY SSF51905 1 316 1.14E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 Hamap MF_01685 Ferredoxin--NADP reductase. 1 329 35.433 T 23-04-2016 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101|MetaCyc: PWY-7230 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 Gene3D G3DSA:3.50.50.60 234 316 3.2E-10 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 Gene3D G3DSA:3.50.50.60 127 233 4.8E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 PANTHER PTHR22912 3 327 6.8E-122 T 23-04-2016 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 2.3E-19 T 23-04-2016 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.3E-19 T 23-04-2016 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 2.3E-19 T 23-04-2016 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 2.3E-19 T 23-04-2016 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 2.3E-19 T 23-04-2016 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 1.5E-17 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 1.5E-17 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 146 170 1.5E-17 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 Gene3D G3DSA:3.50.50.60 2 126 2.3E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02505 97cac88fbb939b00d6d7557c1da40f45 342 PANTHER PTHR22912:SF171 3 327 6.8E-122 T 23-04-2016 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 Pfam PF07724 AAA domain (Cdc48 subfamily) 222 355 9.6E-36 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 PANTHER PTHR11262 243 469 9.4E-190 T 23-04-2016 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 PANTHER PTHR11262 9 109 9.4E-190 T 23-04-2016 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 57 106 4.9E-6 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 PANTHER PTHR11262:SF3 243 469 9.4E-190 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 PANTHER PTHR11262:SF3 9 109 9.4E-190 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 Gene3D G3DSA:3.40.50.300 270 357 8.3E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 Gene3D G3DSA:3.40.50.300 9 114 8.3E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 SMART SM00382 53 358 3.3E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 9 469 1.5E-188 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 SMART SM01086 361 457 6.2E-20 T 23-04-2016 IPR019489 Clp ATPase, C-terminal SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 Gene3D G3DSA:1.10.8.10 115 206 2.9E-20 T 23-04-2016 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 Gene3D G3DSA:1.10.8.10 238 268 2.9E-20 T 23-04-2016 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 361 432 2.3E-6 T 23-04-2016 IPR019489 Clp ATPase, C-terminal SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 Gene3D G3DSA:1.10.8.60 360 469 4.9E-34 T 23-04-2016 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 5 469 41.75 T 23-04-2016 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 SUPERFAMILY SSF52540 203 466 1.19E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07910 56c0750dd0f565184584cca8fe9a14fe 469 SUPERFAMILY SSF52540 8 143 1.19E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04165 9d87449df3e9c5c5cbcade7e49a73915 491 PANTHER PTHR11098:SF1 11 481 9.1E-212 T 23-04-2016 SHYC_RS04165 9d87449df3e9c5c5cbcade7e49a73915 491 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 11 464 4.8E-176 T 23-04-2016 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SHYC_RS04165 9d87449df3e9c5c5cbcade7e49a73915 491 SUPERFAMILY SSF54675 5 138 4.12E-46 T 23-04-2016 SHYC_RS04165 9d87449df3e9c5c5cbcade7e49a73915 491 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 155 336 5.5E-11 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SHYC_RS04165 9d87449df3e9c5c5cbcade7e49a73915 491 PANTHER PTHR11098 11 481 9.1E-212 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SHYC_RS04165 9d87449df3e9c5c5cbcade7e49a73915 491 SUPERFAMILY SSF51690 139 478 3.39E-128 T 23-04-2016 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: REACT_11193|UniPathway: UPA00253 SHYC_RS04165 9d87449df3e9c5c5cbcade7e49a73915 491 Gene3D G3DSA:3.20.140.10 5 387 1.3E-132 T 23-04-2016 SHYC_RS04165 9d87449df3e9c5c5cbcade7e49a73915 491 PIRSF PIRSF000484 3 480 7.9E-148 T 23-04-2016 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|UniPathway: UPA00253 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 Gene3D G3DSA:3.20.20.10 16 253 9.2E-64 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 PRINTS PR01182 Ornithine decarboxylase signature 348 361 5.7E-5 T 23-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 PRINTS PR01182 Ornithine decarboxylase signature 78 102 5.7E-5 T 23-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 PRINTS PR01182 Ornithine decarboxylase signature 35 62 5.7E-5 T 23-04-2016 IPR002433 Ornithine decarboxylase GO:0006596 Reactome: REACT_13 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 19 264 2.5E-37 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 PANTHER PTHR11482 11 385 1.6E-86 T 23-04-2016 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 SUPERFAMILY SSF51419 14 266 1.27E-60 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 269 382 8.2E-11 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 SUPERFAMILY SSF50621 224 387 9.84E-34 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 168 181 1.6E-7 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 37 55 1.6E-7 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 253 272 1.6E-7 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 57 69 1.6E-7 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 PANTHER PTHR11482:SF5 11 385 1.6E-86 T 23-04-2016 SHYC_RS00380 8aac7910d8fea0cec3d538f86a848063 403 Gene3D G3DSA:2.40.37.10 254 387 4.5E-30 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SHYC_RS01405 074b3bba7de1efcacf85a853945acabd 311 SUPERFAMILY SSF51735 2 170 9.85E-18 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01405 074b3bba7de1efcacf85a853945acabd 311 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 180 306 2.7E-32 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS01405 074b3bba7de1efcacf85a853945acabd 311 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 306 4.0E-76 T 23-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS01405 074b3bba7de1efcacf85a853945acabd 311 SUPERFAMILY SSF48179 180 307 3.4E-29 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS01405 074b3bba7de1efcacf85a853945acabd 311 Gene3D G3DSA:3.40.50.720 1 188 1.0E-48 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01405 074b3bba7de1efcacf85a853945acabd 311 PANTHER PTHR21708 1 306 2.5E-63 T 23-04-2016 SHYC_RS01405 074b3bba7de1efcacf85a853945acabd 311 Gene3D G3DSA:1.10.1040.10 189 308 8.5E-37 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHYC_RS01405 074b3bba7de1efcacf85a853945acabd 311 PANTHER PTHR21708:SF24 1 306 2.5E-63 T 23-04-2016 SHYC_RS01405 074b3bba7de1efcacf85a853945acabd 311 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 154 1.5E-35 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS00295 848a38d689d3e6d6b653601fda8a20c9 584 Pfam PF00005 ABC transporter 356 504 3.9E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS00295 848a38d689d3e6d6b653601fda8a20c9 584 SMART SM00382 364 556 4.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS00295 848a38d689d3e6d6b653601fda8a20c9 584 PANTHER PTHR24222 1 583 0.0 T 23-04-2016 SHYC_RS00295 848a38d689d3e6d6b653601fda8a20c9 584 Gene3D G3DSA:1.20.1560.10 13 322 5.6E-49 T 23-04-2016 SHYC_RS00295 848a38d689d3e6d6b653601fda8a20c9 584 PANTHER PTHR24222:SF23 1 583 0.0 T 23-04-2016 SHYC_RS00295 848a38d689d3e6d6b653601fda8a20c9 584 SUPERFAMILY SSF52540 330 573 2.56E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00295 848a38d689d3e6d6b653601fda8a20c9 584 Gene3D G3DSA:3.40.50.300 336 570 3.3E-73 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00295 848a38d689d3e6d6b653601fda8a20c9 584 Pfam PF00664 ABC transporter transmembrane region 26 291 4.4E-31 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS00295 848a38d689d3e6d6b653601fda8a20c9 584 SUPERFAMILY SSF90123 9 324 2.62E-56 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS00295 848a38d689d3e6d6b653601fda8a20c9 584 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS11620 df5e7fbec29e34905fc792c178cb8c5a 296 Pfam PF00924 Mechanosensitive ion channel 77 278 6.7E-38 T 23-04-2016 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 SHYC_RS11620 df5e7fbec29e34905fc792c178cb8c5a 296 SUPERFAMILY SSF50182 120 188 2.16E-12 T 23-04-2016 IPR010920 LSM domain SHYC_RS11620 df5e7fbec29e34905fc792c178cb8c5a 296 PANTHER PTHR30460 11 291 1.9E-84 T 23-04-2016 SHYC_RS11620 df5e7fbec29e34905fc792c178cb8c5a 296 Gene3D G3DSA:2.30.30.60 135 187 3.9E-14 T 23-04-2016 SHYC_RS11620 df5e7fbec29e34905fc792c178cb8c5a 296 SUPERFAMILY SSF82861 28 118 2.62E-15 T 23-04-2016 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 SHYC_RS11620 df5e7fbec29e34905fc792c178cb8c5a 296 SUPERFAMILY SSF82689 192 284 5.89E-6 T 23-04-2016 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 SHYC_RS01115 dccbfe39e7ef0d1c986d09f6333a353e 524 Pfam PF01144 Coenzyme A transferase 9 239 4.1E-16 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SHYC_RS01115 dccbfe39e7ef0d1c986d09f6333a353e 524 PIRSF PIRSF000858 1 520 4.8E-170 T 23-04-2016 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 SHYC_RS01115 dccbfe39e7ef0d1c986d09f6333a353e 524 SUPERFAMILY SSF100950 274 513 9.42E-60 T 23-04-2016 SHYC_RS01115 dccbfe39e7ef0d1c986d09f6333a353e 524 PANTHER PTHR13707:SF38 1 506 3.5E-186 T 23-04-2016 SHYC_RS01115 dccbfe39e7ef0d1c986d09f6333a353e 524 SUPERFAMILY SSF100950 2 254 1.2E-58 T 23-04-2016 SHYC_RS01115 dccbfe39e7ef0d1c986d09f6333a353e 524 PANTHER PTHR13707 1 506 3.5E-186 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SHYC_RS01115 dccbfe39e7ef0d1c986d09f6333a353e 524 Gene3D G3DSA:3.40.1080.10 7 239 5.3E-49 T 23-04-2016 SHYC_RS01115 dccbfe39e7ef0d1c986d09f6333a353e 524 SMART SM00882 3 241 3.9E-27 T 23-04-2016 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 SHYC_RS01115 dccbfe39e7ef0d1c986d09f6333a353e 524 Gene3D G3DSA:3.40.810.20 273 510 2.1E-53 T 23-04-2016 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 PANTHER PTHR13789:SF186 1 357 2.9E-86 T 23-04-2016 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 Pfam PF01494 FAD binding domain 3 306 5.3E-18 T 23-04-2016 IPR002938 FAD-binding domain GO:0071949 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 Gene3D G3DSA:3.50.50.60 258 337 3.7E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 Gene3D G3DSA:3.50.50.60 1 166 3.7E-37 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 PANTHER PTHR13789 1 357 2.9E-86 T 23-04-2016 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 269 284 1.7E-16 T 23-04-2016 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 300 1.7E-16 T 23-04-2016 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 140 155 1.7E-16 T 23-04-2016 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 1.7E-16 T 23-04-2016 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 SUPERFAMILY SSF51905 255 363 1.8E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 SUPERFAMILY SSF51905 1 161 1.8E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02820 d7d9ab5ed960b49bc4a4f7234f752263 374 Gene3D G3DSA:3.40.50.720 202 238 1.0E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 Gene3D G3DSA:4.10.80.40 533 570 6.1E-14 T 23-04-2016 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 SUPERFAMILY SSF51905 3 247 9.47E-63 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 SUPERFAMILY SSF51905 357 425 9.47E-63 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 Gene3D G3DSA:3.90.700.10 237 347 1.3E-24 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 3.3E-6 T 23-04-2016 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.3E-6 T 23-04-2016 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 Pfam PF00890 FAD binding domain 6 392 3.7E-85 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 23-04-2016 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 SUPERFAMILY SSF46977 443 579 1.27E-46 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 PANTHER PTHR11632 5 582 0.0 T 23-04-2016 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 Gene3D G3DSA:3.50.50.60 349 414 4.9E-85 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 Gene3D G3DSA:3.50.50.60 6 236 4.9E-85 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 PANTHER PTHR11632:SF53 5 582 0.0 T 23-04-2016 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 Gene3D G3DSA:1.20.58.100 425 532 7.5E-32 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 5.8E-8 T 23-04-2016 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 5.8E-8 T 23-04-2016 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 4.7E-42 T 23-04-2016 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 SUPERFAMILY SSF56425 231 353 1.94E-31 T 23-04-2016 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain SHYC_RS08385 4c1ec5572e7337ffc08691ee83fd8da7 588 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 4.1E-282 T 23-04-2016 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|UniPathway: UPA00223 SHYC_RS01290 0de68406db30806fe34337de7c980a66 230 PANTHER PTHR11019:SF97 1 65 1.8E-36 T 23-04-2016 SHYC_RS01290 0de68406db30806fe34337de7c980a66 230 PANTHER PTHR11019:SF97 86 225 1.8E-36 T 23-04-2016 SHYC_RS01290 0de68406db30806fe34337de7c980a66 230 Pfam PF01965 DJ-1/PfpI family 81 222 3.4E-12 T 23-04-2016 IPR002818 DJ-1/PfpI SHYC_RS01290 0de68406db30806fe34337de7c980a66 230 PANTHER PTHR11019 1 65 1.8E-36 T 23-04-2016 SHYC_RS01290 0de68406db30806fe34337de7c980a66 230 PANTHER PTHR11019 86 225 1.8E-36 T 23-04-2016 SHYC_RS01290 0de68406db30806fe34337de7c980a66 230 SUPERFAMILY SSF52317 1 227 6.7E-63 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS01290 0de68406db30806fe34337de7c980a66 230 Gene3D G3DSA:3.40.50.880 1 228 5.6E-75 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS01635 4711fd95b212a8e41b72e75e2e49a502 338 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 184 193 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SHYC_RS01635 4711fd95b212a8e41b72e75e2e49a502 338 SUPERFAMILY SSF53383 10 325 1.08E-51 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS01635 4711fd95b212a8e41b72e75e2e49a502 338 PANTHER PTHR11751:SF429 7 328 1.5E-47 T 23-04-2016 SHYC_RS01635 4711fd95b212a8e41b72e75e2e49a502 338 Gene3D G3DSA:3.40.640.10 16 226 7.7E-51 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS01635 4711fd95b212a8e41b72e75e2e49a502 338 Gene3D G3DSA:3.90.1150.10 227 329 6.2E-6 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS01635 4711fd95b212a8e41b72e75e2e49a502 338 Pfam PF00155 Aminotransferase class I and II 20 280 3.4E-34 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHYC_RS01635 4711fd95b212a8e41b72e75e2e49a502 338 PANTHER PTHR11751 7 328 1.5E-47 T 23-04-2016 SHYC_RS06265 4cc0b7714e52988240f6543f1cbbd06c 224 PANTHER PTHR23083 9 212 1.9E-31 T 23-04-2016 SHYC_RS06265 4cc0b7714e52988240f6543f1cbbd06c 224 Gene3D G3DSA:1.25.40.10 6 214 2.1E-38 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS06265 4cc0b7714e52988240f6543f1cbbd06c 224 SUPERFAMILY SSF48452 9 211 1.9E-28 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS06265 4cc0b7714e52988240f6543f1cbbd06c 224 Pfam PF14559 Tetratricopeptide repeat 45 95 6.7E-8 T 23-04-2016 SHYC_RS06265 4cc0b7714e52988240f6543f1cbbd06c 224 SMART SM00028 33 66 0.06 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS06265 4cc0b7714e52988240f6543f1cbbd06c 224 SMART SM00028 101 134 180.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS06265 4cc0b7714e52988240f6543f1cbbd06c 224 SMART SM00028 137 170 68.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS06265 4cc0b7714e52988240f6543f1cbbd06c 224 SMART SM00028 67 100 6.1E-4 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS06265 4cc0b7714e52988240f6543f1cbbd06c 224 SMART SM00028 171 205 12.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 SUPERFAMILY SSF47336 15 80 5.63E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 SUPERFAMILY SSF52777 278 522 2.67E-36 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1953 1968 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 SUPERFAMILY SSF47336 1929 1994 9.55E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 ProSitePatterns PS00455 Putative AMP-binding domain signature. 693 704 - T 23-04-2016 IPR020845 AMP-binding, conserved site SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 SUPERFAMILY SSF52777 103 274 2.33E-16 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Pfam PF00668 Condensation domain 1470 1765 8.7E-34 T 23-04-2016 IPR001242 Condensation domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Pfam PF00668 Condensation domain 103 391 2.3E-41 T 23-04-2016 IPR001242 Condensation domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 SUPERFAMILY SSF53335 1203 1308 9.35E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Gene3D G3DSA:1.10.1200.10 18 81 5.4E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Gene3D G3DSA:1.10.1200.10 1930 1996 4.2E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Gene3D G3DSA:1.10.1200.10 1385 1448 3.7E-12 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 SUPERFAMILY SSF56801 538 1000 1.7E-110 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 SUPERFAMILY SSF56801 1314 1389 1.7E-110 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Gene3D G3DSA:3.40.50.980 546 698 7.2E-37 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Gene3D G3DSA:3.40.50.150 1288 1289 2.1E-4 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Gene3D G3DSA:3.40.50.150 1214 1255 2.1E-4 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 SUPERFAMILY SSF47336 1377 1446 4.58E-9 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 575 973 5.7E-104 T 23-04-2016 IPR010071 Amino acid adenylation domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Gene3D G3DSA:3.40.50.980 699 855 1.2E-39 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 SUPERFAMILY SSF52777 1474 1646 8.15E-20 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Pfam PF08415 Nonribosomal peptide synthase 1789 1844 2.8E-13 T 23-04-2016 IPR013624 Non-ribosomal peptide synthetase SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Pfam PF08415 Nonribosomal peptide synthase 417 472 8.1E-12 T 23-04-2016 IPR013624 Non-ribosomal peptide synthetase SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 PANTHER PTHR24095:SF137 1309 1759 6.5E-215 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 PANTHER PTHR24095:SF137 101 985 6.5E-215 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Gene3D G3DSA:2.30.38.10 864 941 1.2E-19 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Gene3D G3DSA:3.30.300.30 946 998 7.1E-21 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Gene3D G3DSA:3.30.300.30 1319 1384 7.1E-21 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 PANTHER PTHR24095 1309 1759 6.5E-215 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 PANTHER PTHR24095 101 985 6.5E-215 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 SUPERFAMILY SSF52777 1654 1894 1.45E-24 T 23-04-2016 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Pfam PF00501 AMP-binding enzyme 554 950 3.7E-83 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Pfam PF00550 Phosphopantetheine attachment site 1383 1440 2.1E-7 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Pfam PF00550 Phosphopantetheine attachment site 1931 1992 4.7E-11 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS00260 3ebbec208d10f8b0f67c9ce53148f3e9 2007 Pfam PF00550 Phosphopantetheine attachment site 26 74 4.3E-6 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 6 88 8.3E-32 T 23-04-2016 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 92 120 0.0027 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 122 157 1.3E-5 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 7 237 2.6E-113 T 23-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 166 201 1.8E-10 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 Gene3D G3DSA:3.30.70.250 3 88 5.8E-32 T 23-04-2016 SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 PANTHER PTHR23416 42 239 6.2E-54 T 23-04-2016 SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 SUPERFAMILY SSF51161 48 222 2.49E-50 T 23-04-2016 IPR011004 Trimeric LpxA-like SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 2 236 43.472 T 23-04-2016 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941|UniPathway: UPA00034 SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 Gene3D G3DSA:2.160.10.10 89 226 5.3E-48 T 23-04-2016 SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 175 203 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SHYC_RS07285 5187163eb0cc0a3297c9e7895c51afa3 239 PANTHER PTHR23416:SF50 42 239 6.2E-54 T 23-04-2016 SHYC_RS07885 e0d4740d795928d0068818436ac0b91a 184 Gene3D G3DSA:1.10.132.20 65 184 2.7E-43 T 23-04-2016 IPR023584 Ribosome recycling factor domain SHYC_RS07885 e0d4740d795928d0068818436ac0b91a 184 Hamap MF_00040 Ribosome-recycling factor [frr]. 2 184 27.403 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SHYC_RS07885 e0d4740d795928d0068818436ac0b91a 184 TIGRFAM TIGR00496 frr: ribosome recycling factor 9 184 8.9E-73 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SHYC_RS07885 e0d4740d795928d0068818436ac0b91a 184 Pfam PF01765 Ribosome recycling factor 19 182 4.8E-61 T 23-04-2016 IPR023584 Ribosome recycling factor domain SHYC_RS07885 e0d4740d795928d0068818436ac0b91a 184 SUPERFAMILY SSF55194 2 182 1.24E-67 T 23-04-2016 IPR023584 Ribosome recycling factor domain SHYC_RS07885 e0d4740d795928d0068818436ac0b91a 184 PANTHER PTHR20982 1 184 3.9E-73 T 23-04-2016 IPR002661 Ribosome recycling factor GO:0006412 SHYC_RS06495 5bfbe021bfbcb1f0a318251fe0cf4423 112 Gene3D G3DSA:1.10.3830.10 2 111 3.3E-35 T 23-04-2016 SHYC_RS06495 5bfbe021bfbcb1f0a318251fe0cf4423 112 PANTHER PTHR34299:SF1 1 111 2.6E-28 T 23-04-2016 SHYC_RS06495 5bfbe021bfbcb1f0a318251fe0cf4423 112 PANTHER PTHR34299 1 111 2.6E-28 T 23-04-2016 SHYC_RS06495 5bfbe021bfbcb1f0a318251fe0cf4423 112 Pfam PF01219 Prokaryotic diacylglycerol kinase 8 107 3.3E-31 T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SHYC_RS06495 5bfbe021bfbcb1f0a318251fe0cf4423 112 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 60 71 - T 23-04-2016 IPR000829 Diacylglycerol kinase, prokaryotic GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 PANTHER PTHR30437 1 158 2.4E-61 T 23-04-2016 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 158 8.1E-56 T 23-04-2016 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 PIRSF PIRSF006092 1 158 1.2E-51 T 23-04-2016 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 Pfam PF03449 Transcription elongation factor, N-terminal 8 76 3.3E-32 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 32.981 T 23-04-2016 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 84 158 7.1E-26 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 122 138 - T 23-04-2016 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 SUPERFAMILY SSF54534 83 157 2.35E-19 T 23-04-2016 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 Gene3D G3DSA:3.10.50.30 79 158 1.4E-27 T 23-04-2016 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 SUPERFAMILY SSF46557 5 79 1.83E-27 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SHYC_RS06315 02b0a0bfbae57feee5d111ee1658bce0 158 Gene3D G3DSA:1.10.287.180 5 78 1.1E-33 T 23-04-2016 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 SHYC_RS05335 af314d4e42e6e2f753c553fa977506c0 313 SMART SM00471 155 287 1.6E-4 T 23-04-2016 IPR003607 HD/PDEase domain SHYC_RS05335 af314d4e42e6e2f753c553fa977506c0 313 Gene3D G3DSA:2.40.50.140 22 93 8.8E-4 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS05335 af314d4e42e6e2f753c553fa977506c0 313 SUPERFAMILY SSF50249 29 90 1.2E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS05335 af314d4e42e6e2f753c553fa977506c0 313 Gene3D G3DSA:1.10.3210.10 127 277 4.6E-8 T 23-04-2016 IPR006674 HD domain SHYC_RS05335 af314d4e42e6e2f753c553fa977506c0 313 PANTHER PTHR37294 1 313 1.3E-119 T 23-04-2016 SHYC_RS05335 af314d4e42e6e2f753c553fa977506c0 313 Pfam PF01966 HD domain 161 277 1.8E-9 T 23-04-2016 IPR006674 HD domain SHYC_RS05335 af314d4e42e6e2f753c553fa977506c0 313 PANTHER PTHR37294:SF1 1 313 1.3E-119 T 23-04-2016 SHYC_RS05335 af314d4e42e6e2f753c553fa977506c0 313 SUPERFAMILY SSF109604 138 279 1.17E-14 T 23-04-2016 SHYC_RS05335 af314d4e42e6e2f753c553fa977506c0 313 Pfam PF01336 OB-fold nucleic acid binding domain 27 88 6.2E-7 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SHYC_RS08805 553ac85f122d5c30f666e6c6a9fcbd31 302 SUPERFAMILY SSF52540 32 238 4.07E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08805 553ac85f122d5c30f666e6c6a9fcbd31 302 Gene3D G3DSA:3.40.50.300 6 250 2.9E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08805 553ac85f122d5c30f666e6c6a9fcbd31 302 PANTHER PTHR24220 39 279 1.3E-97 T 23-04-2016 SHYC_RS08805 553ac85f122d5c30f666e6c6a9fcbd31 302 PANTHER PTHR24220 6 18 1.3E-97 T 23-04-2016 SHYC_RS08805 553ac85f122d5c30f666e6c6a9fcbd31 302 Pfam PF00005 ABC transporter 43 173 5.3E-18 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS08805 553ac85f122d5c30f666e6c6a9fcbd31 302 PANTHER PTHR24220:SF117 39 279 1.3E-97 T 23-04-2016 SHYC_RS08805 553ac85f122d5c30f666e6c6a9fcbd31 302 PANTHER PTHR24220:SF117 6 18 1.3E-97 T 23-04-2016 SHYC_RS08805 553ac85f122d5c30f666e6c6a9fcbd31 302 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS08805 553ac85f122d5c30f666e6c6a9fcbd31 302 SMART SM00382 51 222 3.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 Gene3D G3DSA:1.20.120.530 95 213 1.0E-11 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 Pfam PF07729 FCD domain 113 210 2.6E-11 T 23-04-2016 IPR011711 GntR, C-terminal SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 73 9.7E-19 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 SUPERFAMILY SSF46785 1 86 1.7E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 SMART SM00345 14 73 9.4E-18 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 PANTHER PTHR11751 14 75 2.0E-17 T 23-04-2016 SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 PANTHER PTHR11751 91 114 2.0E-17 T 23-04-2016 SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 SMART SM00895 98 211 7.3E-5 T 23-04-2016 IPR011711 GntR, C-terminal SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 8.6E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 8.6E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 SUPERFAMILY SSF48008 95 214 3.14E-13 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SHYC_RS02905 793c950411d98aa497ae1e2aef34cf80 221 Gene3D G3DSA:1.10.10.10 4 76 1.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06565 51044d13c95a5d6174fd0fae01e271ae 256 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS06565 51044d13c95a5d6174fd0fae01e271ae 256 SMART SM00382 30 224 2.9E-19 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS06565 51044d13c95a5d6174fd0fae01e271ae 256 PANTHER PTHR24220:SF566 7 239 7.8E-125 T 23-04-2016 SHYC_RS06565 51044d13c95a5d6174fd0fae01e271ae 256 SUPERFAMILY SSF52540 3 230 1.97E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06565 51044d13c95a5d6174fd0fae01e271ae 256 PANTHER PTHR24220 7 239 7.8E-125 T 23-04-2016 SHYC_RS06565 51044d13c95a5d6174fd0fae01e271ae 256 Gene3D G3DSA:3.40.50.300 3 232 2.2E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06565 51044d13c95a5d6174fd0fae01e271ae 256 Pfam PF00005 ABC transporter 21 170 6.0E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 PANTHER PTHR24220 3 339 4.8E-142 T 23-04-2016 SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 SMART SM00930 263 339 1.8E-19 T 23-04-2016 IPR018449 NIL domain SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 SUPERFAMILY SSF55021 255 341 4.69E-19 T 23-04-2016 SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 SMART SM00382 30 218 4.9E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 SUPERFAMILY SSF52540 1 240 3.73E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 Gene3D G3DSA:3.40.50.300 1 236 7.8E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 Pfam PF09383 NIL domain 265 338 2.7E-15 T 23-04-2016 IPR018449 NIL domain SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 Pfam PF00005 ABC transporter 22 169 7.4E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 PANTHER PTHR24220:SF186 3 339 4.8E-142 T 23-04-2016 IPR026253 Methionine import ATP-binding protein MetN GO:0005524|GO:0015821|GO:0042626 SHYC_RS09470 b47149a83d3ad917357a299f44cd62d3 342 Gene3D G3DSA:3.30.70.260 237 341 5.9E-23 T 23-04-2016 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 Pfam PF01018 GTP1/OBG 2 157 9.9E-62 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 359 428 7.8E-27 T 23-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 Gene3D G3DSA:3.40.50.300 159 330 9.6E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 SUPERFAMILY SSF52540 160 361 2.76E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 9.5E-142 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 SUPERFAMILY SSF102741 357 429 6.02E-23 T 23-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 Gene3D G3DSA:2.70.210.12 1 155 3.4E-58 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 Pfam PF09269 Domain of unknown function (DUF1967) 359 427 6.1E-25 T 23-04-2016 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 Hamap MF_01454 GTPase Obg [obg]. 1 329 46.985 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 324 3.4E-13 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 PANTHER PTHR11702:SF3 2 330 1.6E-164 T 23-04-2016 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 Pfam PF01926 50S ribosome-binding GTPase 160 283 1.5E-23 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 23-04-2016 IPR006074 GTP1/OBG, conserved site GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 SUPERFAMILY SSF82051 1 157 1.03E-55 T 23-04-2016 IPR006169 GTP1/OBG domain GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 PANTHER PTHR11702 2 330 1.6E-164 T 23-04-2016 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 1.3E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 1.3E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 1.3E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS06150 04ba53eefda22c4e715fca7674503620 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 1.3E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 Gene3D G3DSA:3.40.50.300 271 468 5.2E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 Pfam PF04851 Type III restriction enzyme, res subunit 271 455 2.0E-18 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 4 212 7.3E-42 T 23-04-2016 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 PANTHER PTHR30195 7 976 1.7E-250 T 23-04-2016 SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 8 708 3.5E-192 T 23-04-2016 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 Pfam PF11867 Domain of unknown function (DUF3387) 706 1038 2.3E-119 T 23-04-2016 IPR021810 Protein of unknown function DUF3387 SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 SMART SM00487 265 489 3.0E-13 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 SUPERFAMILY SSF52540 541 580 4.81E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 SUPERFAMILY SSF52540 408 488 4.81E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 SUPERFAMILY SSF52540 615 689 4.81E-8 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 SUPERFAMILY SSF52540 226 494 2.13E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00240 4e493dd36263245171981922d9fd4607 1040 PANTHER PTHR30195:SF15 7 976 1.7E-250 T 23-04-2016 SHYC_RS01920 179489a6aebcc87634473e8b6121b727 321 PANTHER PTHR30472 2 321 8.0E-168 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS01920 179489a6aebcc87634473e8b6121b727 321 Pfam PF01032 FecCD transport family 14 315 7.2E-61 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS01920 179489a6aebcc87634473e8b6121b727 321 Gene3D G3DSA:1.10.3470.10 7 317 8.6E-64 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS01920 179489a6aebcc87634473e8b6121b727 321 SUPERFAMILY SSF81345 3 315 2.35E-63 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS01920 179489a6aebcc87634473e8b6121b727 321 PANTHER PTHR30472:SF27 2 321 8.0E-168 T 23-04-2016 SHYC_RS01025 b60ec75812db6adbcf712559651cc63c 230 PANTHER PTHR21343 1 220 1.9E-51 T 23-04-2016 SHYC_RS01025 b60ec75812db6adbcf712559651cc63c 230 Pfam PF13500 AAA domain 2 198 1.2E-26 T 23-04-2016 SHYC_RS01025 b60ec75812db6adbcf712559651cc63c 230 Gene3D G3DSA:3.40.50.300 2 201 1.6E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01025 b60ec75812db6adbcf712559651cc63c 230 SUPERFAMILY SSF52540 1 198 6.21E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01025 b60ec75812db6adbcf712559651cc63c 230 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 203 18.845 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SHYC_RS01025 b60ec75812db6adbcf712559651cc63c 230 PIRSF PIRSF006755 1 214 7.8E-42 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SHYC_RS01025 b60ec75812db6adbcf712559651cc63c 230 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 4 165 6.6E-34 T 23-04-2016 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380|UniPathway: UPA00078 SHYC_RS01025 b60ec75812db6adbcf712559651cc63c 230 PANTHER PTHR21343:SF0 1 220 1.9E-51 T 23-04-2016 SHYC_RS08520 388130c8bdafd51b4abfb0d2d719b2fc 91 Gene3D G3DSA:1.10.287.750 3 83 1.9E-38 T 23-04-2016 IPR009983 Uncharacterised protein family UPF0358 SHYC_RS08520 388130c8bdafd51b4abfb0d2d719b2fc 91 Pfam PF07408 Protein of unknown function (DUF1507) 8 89 1.5E-38 T 23-04-2016 IPR009983 Uncharacterised protein family UPF0358 SHYC_RS08520 388130c8bdafd51b4abfb0d2d719b2fc 91 Hamap MF_01560 UPF0358 protein . 1 91 25.392 T 23-04-2016 IPR009983 Uncharacterised protein family UPF0358 SHYC_RS08520 388130c8bdafd51b4abfb0d2d719b2fc 91 SUPERFAMILY SSF140404 4 82 1.31E-34 T 23-04-2016 IPR009983 Uncharacterised protein family UPF0358 SHYC_RS07185 3f674213aabf12ec914d5cf922a34aa7 357 SUPERFAMILY SSF53756 3 343 9.42E-83 T 23-04-2016 SHYC_RS07185 3f674213aabf12ec914d5cf922a34aa7 357 PANTHER PTHR21015 1 353 8.6E-176 T 23-04-2016 SHYC_RS07185 3f674213aabf12ec914d5cf922a34aa7 357 Gene3D G3DSA:3.40.50.2000 194 327 9.6E-5 T 23-04-2016 SHYC_RS07185 3f674213aabf12ec914d5cf922a34aa7 357 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 143 3.6E-37 T 23-04-2016 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS07185 3f674213aabf12ec914d5cf922a34aa7 357 PANTHER PTHR21015:SF27 1 353 8.6E-176 T 23-04-2016 SHYC_RS07185 3f674213aabf12ec914d5cf922a34aa7 357 Gene3D G3DSA:3.40.50.2000 1 193 1.1E-56 T 23-04-2016 SHYC_RS07185 3f674213aabf12ec914d5cf922a34aa7 357 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 189 340 2.5E-28 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS07185 3f674213aabf12ec914d5cf922a34aa7 357 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 354 26.305 T 23-04-2016 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS07410 abf51b4649989dfc976e148585cbec30 193 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 182 5.9E-53 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SHYC_RS07410 abf51b4649989dfc976e148585cbec30 193 PANTHER PTHR30309 1 193 2.7E-77 T 23-04-2016 SHYC_RS07410 abf51b4649989dfc976e148585cbec30 193 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 4 192 1.8E-61 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SHYC_RS07410 abf51b4649989dfc976e148585cbec30 193 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 191 20.694 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SHYC_RS07410 abf51b4649989dfc976e148585cbec30 193 SMART SM01207 8 183 8.9E-81 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SHYC_RS07410 abf51b4649989dfc976e148585cbec30 193 PANTHER PTHR30309:SF0 1 193 2.7E-77 T 23-04-2016 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 UniPathway: UPA00085 SHYC_RS03780 fe9a30378ec27544a07cd924ac289f9e 399 Pfam PF01098 Cell cycle protein 18 385 1.4E-90 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SHYC_RS03780 fe9a30378ec27544a07cd924ac289f9e 399 PANTHER PTHR30474:SF1 1 388 4.2E-137 T 23-04-2016 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 SHYC_RS03780 fe9a30378ec27544a07cd924ac289f9e 399 PANTHER PTHR30474 1 388 4.2E-137 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SHYC_RS00255 34b6ec0293895fcaec1631778c8d3e00 529 Gene3D G3DSA:3.40.50.980 194 356 6.4E-33 T 23-04-2016 SHYC_RS00255 34b6ec0293895fcaec1631778c8d3e00 529 SUPERFAMILY SSF56801 17 528 7.46E-107 T 23-04-2016 SHYC_RS00255 34b6ec0293895fcaec1631778c8d3e00 529 Gene3D G3DSA:3.30.300.30 431 528 1.0E-19 T 23-04-2016 SHYC_RS00255 34b6ec0293895fcaec1631778c8d3e00 529 PANTHER PTHR24095 7 529 6.0E-160 T 23-04-2016 SHYC_RS00255 34b6ec0293895fcaec1631778c8d3e00 529 Gene3D G3DSA:2.30.38.10 357 430 3.0E-14 T 23-04-2016 SHYC_RS00255 34b6ec0293895fcaec1631778c8d3e00 529 Pfam PF00501 AMP-binding enzyme 28 435 2.1E-63 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHYC_RS00255 34b6ec0293895fcaec1631778c8d3e00 529 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 519 1.5E-6 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SHYC_RS00255 34b6ec0293895fcaec1631778c8d3e00 529 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 23-04-2016 IPR020845 AMP-binding, conserved site SHYC_RS00255 34b6ec0293895fcaec1631778c8d3e00 529 Gene3D G3DSA:3.40.50.980 22 193 1.5E-25 T 23-04-2016 SHYC_RS00255 34b6ec0293895fcaec1631778c8d3e00 529 PANTHER PTHR24095:SF123 7 529 6.0E-160 T 23-04-2016 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 205 353 1.9E-39 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 63 110 4.5E-7 T 23-04-2016 IPR011096 FTP domain SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 Gene3D G3DSA:1.10.390.10 358 500 2.2E-47 T 23-04-2016 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 Gene3D G3DSA:3.10.170.10 205 356 6.0E-42 T 23-04-2016 IPR013856 Peptidase M4 domain GO:0004222 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 SUPERFAMILY SSF55486 202 501 2.56E-97 T 23-04-2016 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 344 360 2.8E-23 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 365 376 2.8E-23 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 308 328 2.8E-23 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 428 444 2.8E-23 T 23-04-2016 IPR023612 Peptidase M4 GO:0004222|GO:0006508 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 PANTHER PTHR33794:SF1 66 501 6.8E-125 T 23-04-2016 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 Pfam PF03413 Peptidase propeptide and YPEB domain 123 195 2.7E-10 T 23-04-2016 IPR025711 PepSY domain SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 PANTHER PTHR33794 66 501 6.8E-125 T 23-04-2016 SHYC_RS09605 fa5d4bd6e57cb72a2439184d8f084653 501 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 356 500 3.7E-43 T 23-04-2016 IPR001570 Peptidase M4, C-terminal GO:0004222 SHYC_RS11390 64a21e2f6b41b6848b7dc0d2777e7e5e 227 Gene3D G3DSA:1.10.150.240 16 96 6.4E-21 T 23-04-2016 IPR023198 Phosphoglycolate phosphatase, domain 2 SHYC_RS11390 64a21e2f6b41b6848b7dc0d2777e7e5e 227 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 227 2.9E-55 T 23-04-2016 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 SHYC_RS11390 64a21e2f6b41b6848b7dc0d2777e7e5e 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 199 3.6E-24 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS11390 64a21e2f6b41b6848b7dc0d2777e7e5e 227 PANTHER PTHR12725 1 227 1.7E-38 T 23-04-2016 SHYC_RS11390 64a21e2f6b41b6848b7dc0d2777e7e5e 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 194 1.4E-8 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS11390 64a21e2f6b41b6848b7dc0d2777e7e5e 227 SUPERFAMILY SSF56784 3 227 8.27E-43 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS11390 64a21e2f6b41b6848b7dc0d2777e7e5e 227 Gene3D G3DSA:3.40.50.1000 97 227 6.8E-38 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS11390 64a21e2f6b41b6848b7dc0d2777e7e5e 227 PANTHER PTHR12725:SF57 1 227 1.7E-38 T 23-04-2016 SHYC_RS01725 11f71d5cd56f5496182190fe1eb93520 393 SUPERFAMILY SSF103473 7 391 4.19E-27 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS01725 11f71d5cd56f5496182190fe1eb93520 393 PANTHER PTHR23513 5 391 2.7E-32 T 23-04-2016 SHYC_RS01725 11f71d5cd56f5496182190fe1eb93520 393 Gene3D G3DSA:1.20.1250.20 209 386 8.5E-10 T 23-04-2016 SHYC_RS01725 11f71d5cd56f5496182190fe1eb93520 393 Gene3D G3DSA:1.20.1250.20 12 188 2.4E-11 T 23-04-2016 SHYC_RS01725 11f71d5cd56f5496182190fe1eb93520 393 Pfam PF07690 Major Facilitator Superfamily 12 351 2.9E-17 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS00535 23cffd90eb3e07a4971632156ada7bc8 138 SUPERFAMILY SSF53927 2 131 1.64E-24 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHYC_RS00535 23cffd90eb3e07a4971632156ada7bc8 138 Gene3D G3DSA:3.40.140.10 2 131 4.2E-36 T 23-04-2016 SHYC_RS05745 5a42b699d57a1fd760c515597870c0c7 202 PANTHER PTHR40070 2 163 1.7E-42 T 23-04-2016 SHYC_RS05745 5a42b699d57a1fd760c515597870c0c7 202 PANTHER PTHR40070:SF1 2 163 1.7E-42 T 23-04-2016 SHYC_RS05745 5a42b699d57a1fd760c515597870c0c7 202 Pfam PF06103 Bacterial protein of unknown function (DUF948) 7 94 3.5E-28 T 23-04-2016 IPR009293 Uncharacterised protein family UPF0478 SHYC_RS05745 5a42b699d57a1fd760c515597870c0c7 202 Gene3D G3DSA:1.10.287.950 33 118 2.2E-4 T 23-04-2016 SHYC_RS03765 80ff2eb98b987aba112876819bdf992d 77 Gene3D G3DSA:3.30.70.100 18 66 4.3E-4 T 23-04-2016 SHYC_RS03765 80ff2eb98b987aba112876819bdf992d 77 SUPERFAMILY SSF55008 6 67 5.63E-6 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHYC_RS09740 5d7f5835d513612a88e4575d71082e3c 212 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 23-04-2016 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site SHYC_RS09740 5d7f5835d513612a88e4575d71082e3c 212 SUPERFAMILY SSF54980 137 200 4.03E-9 T 23-04-2016 IPR009022 Elongation factor G, III-V domain SHYC_RS09740 5d7f5835d513612a88e4575d71082e3c 212 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 3 200 1.9E-58 T 23-04-2016 IPR015796 Impact family, bacterial/archaeal SHYC_RS09740 5d7f5835d513612a88e4575d71082e3c 212 Gene3D G3DSA:3.30.230.30 6 131 9.6E-50 T 23-04-2016 IPR001498 Impact, N-terminal SHYC_RS09740 5d7f5835d513612a88e4575d71082e3c 212 Pfam PF01205 Uncharacterized protein family UPF0029 20 124 8.2E-34 T 23-04-2016 IPR001498 Impact, N-terminal SHYC_RS09740 5d7f5835d513612a88e4575d71082e3c 212 PANTHER PTHR16301 3 204 2.4E-67 T 23-04-2016 IPR023582 Impact family SHYC_RS09740 5d7f5835d513612a88e4575d71082e3c 212 Gene3D G3DSA:3.30.70.240 137 202 3.2E-7 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain SHYC_RS09740 5d7f5835d513612a88e4575d71082e3c 212 SUPERFAMILY SSF54211 5 131 1.37E-44 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS09740 5d7f5835d513612a88e4575d71082e3c 212 Pfam PF09186 Domain of unknown function (DUF1949) 140 195 2.7E-13 T 23-04-2016 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal SHYC_RS02780 4abffabfedc9c6955a266688628bb44d 231 SMART SM00420 6 62 3.3E-5 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHYC_RS02780 4abffabfedc9c6955a266688628bb44d 231 Pfam PF08279 HTH domain 6 61 1.1E-15 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 SHYC_RS02780 4abffabfedc9c6955a266688628bb44d 231 PANTHER PTHR30363:SF23 1 63 7.7E-16 T 23-04-2016 SHYC_RS02780 4abffabfedc9c6955a266688628bb44d 231 PANTHER PTHR30363 1 63 7.7E-16 T 23-04-2016 SHYC_RS02780 4abffabfedc9c6955a266688628bb44d 231 Gene3D G3DSA:1.10.10.10 2 63 3.4E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02780 4abffabfedc9c6955a266688628bb44d 231 SUPERFAMILY SSF46785 3 61 3.04E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10445 ab61a3613ed4cdd183e38818d850cca8 249 Hamap MF_01442 Putative heme-dependent peroxidase . 1 249 54.08 T 23-04-2016 IPR031332 Putative heme-dependent peroxidase, UPF0447 family SHYC_RS10445 ab61a3613ed4cdd183e38818d850cca8 249 PANTHER PTHR36843:SF1 1 249 8.6E-61 T 23-04-2016 SHYC_RS10445 ab61a3613ed4cdd183e38818d850cca8 249 PANTHER PTHR36843 1 249 8.6E-61 T 23-04-2016 SHYC_RS10445 ab61a3613ed4cdd183e38818d850cca8 249 Pfam PF06778 Chlorite dismutase 33 238 4.6E-74 T 23-04-2016 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase SHYC_RS10445 ab61a3613ed4cdd183e38818d850cca8 249 SUPERFAMILY SSF54909 1 248 4.02E-91 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel SHYC_RS10445 ab61a3613ed4cdd183e38818d850cca8 249 Gene3D G3DSA:3.30.70.1030 1 138 2.5E-51 T 23-04-2016 SHYC_RS10445 ab61a3613ed4cdd183e38818d850cca8 249 Gene3D G3DSA:3.30.70.1100 140 247 1.9E-48 T 23-04-2016 SHYC_RS09830 e6a429c728ea473d944b4862cdb27096 166 PANTHER PTHR34354:SF1 1 152 1.1E-72 T 23-04-2016 SHYC_RS09830 e6a429c728ea473d944b4862cdb27096 166 Pfam PF14489 QueF-like protein 63 141 5.6E-35 T 23-04-2016 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS09830 e6a429c728ea473d944b4862cdb27096 166 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 166 70.028 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS09830 e6a429c728ea473d944b4862cdb27096 166 PIRSF PIRSF027377 9 148 1.4E-62 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS09830 e6a429c728ea473d944b4862cdb27096 166 SUPERFAMILY SSF55620 25 136 1.19E-27 T 23-04-2016 SHYC_RS09830 e6a429c728ea473d944b4862cdb27096 166 PANTHER PTHR34354 1 152 1.1E-72 T 23-04-2016 SHYC_RS09830 e6a429c728ea473d944b4862cdb27096 166 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 29 139 5.4E-53 T 23-04-2016 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS09830 e6a429c728ea473d944b4862cdb27096 166 Gene3D G3DSA:3.30.1130.10 19 150 9.1E-57 T 23-04-2016 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 SMART SM00958 234 346 4.6E-38 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 Pfam PF01043 SecA preprotein cross-linking domain 239 346 1.1E-25 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 TIGRFAM TIGR03714 secA2: accessory Sec system translocase SecA2 14 775 0.0 T 23-04-2016 IPR022490 Protein translocase subunit SecA2 GO:0015031|GO:0015450 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 Pfam PF07516 SecA Wing and Scaffold domain 584 784 6.5E-25 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 Gene3D G3DSA:3.40.50.300 357 403 3.1E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 Gene3D G3DSA:3.40.50.300 9 234 3.1E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 Hamap MF_01382 Protein translocase subunit SecA [secA]. 6 788 15.457 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 SUPERFAMILY SSF81886 584 800 1.27E-37 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 SUPERFAMILY SSF81767 233 355 1.7E-34 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 SUPERFAMILY SSF52540 8 234 1.77E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 SMART SM00957 7 390 1.5E-186 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 Gene3D G3DSA:3.40.50.300 405 564 2.9E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 PRINTS PR00906 SecA protein signature 364 381 2.4E-52 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 PRINTS PR00906 SecA protein signature 401 414 2.4E-52 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 PRINTS PR00906 SecA protein signature 102 116 2.4E-52 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 PRINTS PR00906 SecA protein signature 176 196 2.4E-52 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 PRINTS PR00906 SecA protein signature 327 349 2.4E-52 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 PRINTS PR00906 SecA protein signature 64 88 2.4E-52 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 PRINTS PR00906 SecA protein signature 118 128 2.4E-52 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 Gene3D G3DSA:3.90.1440.10 238 355 6.3E-34 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 SUPERFAMILY SSF52540 405 560 7.52E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 Gene3D G3DSA:1.10.3060.10 612 784 3.1E-25 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 PANTHER PTHR30612 4 784 6.4E-218 T 23-04-2016 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 Pfam PF07517 SecA DEAD-like domain 14 389 4.8E-99 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SHYC_RS01075 88ce4b802d2bb741243ff61d5decbdea 801 SUPERFAMILY SSF52540 356 402 1.77E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 PIRSF PIRSF000185 2 414 1.9E-170 T 23-04-2016 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 SUPERFAMILY SSF51735 181 413 2.71E-75 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 SMART SM00839 183 412 1.4E-94 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 PANTHER PTHR11606 18 413 2.2E-185 T 23-04-2016 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 100 113 - T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 37 162 2.5E-55 T 23-04-2016 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 Gene3D G3DSA:3.40.50.720 181 413 6.7E-80 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 181 412 6.0E-75 T 23-04-2016 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 214 234 1.4E-29 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 92 106 1.4E-29 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 172 194 1.4E-29 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 340 351 1.4E-29 T 23-04-2016 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 SUPERFAMILY SSF53223 6 183 3.84E-66 T 23-04-2016 SHYC_RS09240 7f0536b5c8b87652af3c87cb18d9f793 414 Gene3D G3DSA:3.40.192.10 38 178 7.3E-58 T 23-04-2016 SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 SUPERFAMILY SSF55920 2 247 4.06E-73 T 23-04-2016 IPR000994 Peptidase M24, structural domain SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 Gene3D G3DSA:3.90.230.10 2 249 4.7E-77 T 23-04-2016 IPR000994 Peptidase M24, structural domain SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 1 247 6.3E-86 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 PANTHER PTHR10804:SF41 1 252 1.8E-111 T 23-04-2016 SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 Hamap MF_01974 Methionine aminopeptidase [map]. 1 249 35.977 T 23-04-2016 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 6.8E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 6.8E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 6.8E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 6.8E-21 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 Pfam PF00557 Metallopeptidase family M24 12 240 1.0E-49 T 23-04-2016 IPR000994 Peptidase M24, structural domain SHYC_RS04285 0d302367c66dcc338abfffbf767f3e09 252 PANTHER PTHR10804 1 252 1.8E-111 T 23-04-2016 SHYC_RS02260 9788153e18d1f3006e629587d633b28b 254 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 23-04-2016 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 SHYC_RS02260 9788153e18d1f3006e629587d633b28b 254 Pfam PF13353 4Fe-4S single cluster domain 15 154 1.4E-20 T 23-04-2016 SHYC_RS02260 9788153e18d1f3006e629587d633b28b 254 Gene3D G3DSA:3.80.30.10 69 245 2.1E-68 T 23-04-2016 SHYC_RS02260 9788153e18d1f3006e629587d633b28b 254 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 241 9.2E-95 T 23-04-2016 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 SHYC_RS02260 9788153e18d1f3006e629587d633b28b 254 PANTHER PTHR30352 1 249 2.0E-114 T 23-04-2016 SHYC_RS02260 9788153e18d1f3006e629587d633b28b 254 SUPERFAMILY SSF102114 22 217 1.7E-25 T 23-04-2016 SHYC_RS02260 9788153e18d1f3006e629587d633b28b 254 Pfam PF04055 Radical SAM superfamily 24 185 8.2E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS02260 9788153e18d1f3006e629587d633b28b 254 PANTHER PTHR30352:SF9 1 249 2.0E-114 T 23-04-2016 SHYC_RS03890 548795378709711eefa15bf57a7e57d4 422 PANTHER PTHR10314 5 368 6.7E-166 T 23-04-2016 SHYC_RS03890 548795378709711eefa15bf57a7e57d4 422 SUPERFAMILY SSF55021 339 417 2.75E-10 T 23-04-2016 SHYC_RS03890 548795378709711eefa15bf57a7e57d4 422 SUPERFAMILY SSF53686 10 366 2.1E-92 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS03890 548795378709711eefa15bf57a7e57d4 422 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 48 61 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SHYC_RS03890 548795378709711eefa15bf57a7e57d4 422 PANTHER PTHR10314:SF30 5 368 6.7E-166 T 23-04-2016 SHYC_RS03890 548795378709711eefa15bf57a7e57d4 422 Gene3D G3DSA:3.40.1020.10 225 421 8.3E-47 T 23-04-2016 SHYC_RS03890 548795378709711eefa15bf57a7e57d4 422 Gene3D G3DSA:3.40.50.1100 56 155 1.1E-29 T 23-04-2016 SHYC_RS03890 548795378709711eefa15bf57a7e57d4 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 316 2.9E-71 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS03890 548795378709711eefa15bf57a7e57d4 422 TIGRFAM TIGR02079 THD1: threonine dehydratase 12 422 1.7E-184 T 23-04-2016 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SHYC_RS03890 548795378709711eefa15bf57a7e57d4 422 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 421 6.0E-23 T 23-04-2016 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19|UniPathway: UPA00047 SHYC_RS01885 c3c03080ba29393485ca7497dc06b6d5 299 SUPERFAMILY SSF90002 217 294 1.83E-9 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHYC_RS01885 c3c03080ba29393485ca7497dc06b6d5 299 SUPERFAMILY SSF52540 2 172 4.63E-23 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01885 c3c03080ba29393485ca7497dc06b6d5 299 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 216 294 5.7E-10 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHYC_RS01885 c3c03080ba29393485ca7497dc06b6d5 299 Gene3D G3DSA:3.30.1220.10 205 294 5.0E-7 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHYC_RS01885 c3c03080ba29393485ca7497dc06b6d5 299 PANTHER PTHR13748:SF10 1 283 1.1E-56 T 23-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 SHYC_RS01885 c3c03080ba29393485ca7497dc06b6d5 299 PANTHER PTHR13748 1 283 1.1E-56 T 23-04-2016 SHYC_RS01885 c3c03080ba29393485ca7497dc06b6d5 299 Gene3D G3DSA:3.40.50.300 2 193 3.4E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01885 c3c03080ba29393485ca7497dc06b6d5 299 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 3 171 6.5E-40 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SHYC_RS10175 5817762a052bad4c4cbc5bd1497d5b20 345 SUPERFAMILY SSF53474 33 318 1.93E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS10175 5817762a052bad4c4cbc5bd1497d5b20 345 PANTHER PTHR23024:SF47 42 343 1.0E-40 T 23-04-2016 SHYC_RS10175 5817762a052bad4c4cbc5bd1497d5b20 345 Pfam PF07859 alpha/beta hydrolase fold 83 290 6.6E-28 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 SHYC_RS10175 5817762a052bad4c4cbc5bd1497d5b20 345 PANTHER PTHR23024 42 343 1.0E-40 T 23-04-2016 SHYC_RS10175 5817762a052bad4c4cbc5bd1497d5b20 345 Gene3D G3DSA:3.40.50.1820 53 319 3.6E-53 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS09945 2e6937d815662821269b1ea063957935 454 Gene3D G3DSA:3.10.580.10 206 346 2.1E-20 T 23-04-2016 SHYC_RS09945 2e6937d815662821269b1ea063957935 454 Gene3D G3DSA:3.30.465.10 347 429 3.6E-17 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SHYC_RS09945 2e6937d815662821269b1ea063957935 454 Pfam PF01595 Domain of unknown function DUF21 11 203 7.4E-49 T 23-04-2016 IPR002550 Domain of unknown function DUF21 SHYC_RS09945 2e6937d815662821269b1ea063957935 454 SUPERFAMILY SSF54631 206 341 8.97E-29 T 23-04-2016 SHYC_RS09945 2e6937d815662821269b1ea063957935 454 SMART SM01091 354 431 2.2E-13 T 23-04-2016 IPR005170 Transporter-associated domain SHYC_RS09945 2e6937d815662821269b1ea063957935 454 PANTHER PTHR22777:SF18 5 450 5.4E-210 T 23-04-2016 SHYC_RS09945 2e6937d815662821269b1ea063957935 454 PANTHER PTHR22777 5 450 5.4E-210 T 23-04-2016 SHYC_RS09945 2e6937d815662821269b1ea063957935 454 SUPERFAMILY SSF56176 352 433 4.64E-13 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SHYC_RS09945 2e6937d815662821269b1ea063957935 454 Pfam PF03471 Transporter associated domain 355 429 4.0E-13 T 23-04-2016 IPR005170 Transporter-associated domain SHYC_RS09945 2e6937d815662821269b1ea063957935 454 Pfam PF00571 CBS domain 289 338 6.2E-7 T 23-04-2016 IPR000644 CBS domain SHYC_RS09945 2e6937d815662821269b1ea063957935 454 Pfam PF00571 CBS domain 219 273 2.0E-4 T 23-04-2016 IPR000644 CBS domain SHYC_RS06210 b421a0e085a62335fda7891f2fcb7cd6 291 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 122 286 9.1E-46 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SHYC_RS06210 b421a0e085a62335fda7891f2fcb7cd6 291 Pfam PF08239 Bacterial SH3 domain 52 100 1.9E-9 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type SHYC_RS06210 b421a0e085a62335fda7891f2fcb7cd6 291 PANTHER PTHR30032:SF6 117 289 2.9E-57 T 23-04-2016 SHYC_RS06210 b421a0e085a62335fda7891f2fcb7cd6 291 SMART SM00287 42 105 3.2E-8 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type SHYC_RS06210 b421a0e085a62335fda7891f2fcb7cd6 291 PANTHER PTHR30032 117 289 2.9E-57 T 23-04-2016 SHYC_RS06210 b421a0e085a62335fda7891f2fcb7cd6 291 Gene3D G3DSA:3.40.630.40 119 289 4.3E-53 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SHYC_RS06210 b421a0e085a62335fda7891f2fcb7cd6 291 SMART SM00646 179 286 1.0E-33 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SHYC_RS06210 b421a0e085a62335fda7891f2fcb7cd6 291 SUPERFAMILY SSF53187 119 289 1.19E-49 T 23-04-2016 SHYC_RS11745 4dd85b146491a29114149793670b48b6 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 27.506 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHYC_RS11745 4dd85b146491a29114149793670b48b6 239 PIRSF PIRSF003078 2 220 7.9E-54 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHYC_RS11745 4dd85b146491a29114149793670b48b6 239 Pfam PF02527 rRNA small subunit methyltransferase G 21 190 5.8E-54 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHYC_RS11745 4dd85b146491a29114149793670b48b6 239 PANTHER PTHR31760 5 239 6.9E-93 T 23-04-2016 SHYC_RS11745 4dd85b146491a29114149793670b48b6 239 PANTHER PTHR31760:SF0 5 239 6.9E-93 T 23-04-2016 SHYC_RS11745 4dd85b146491a29114149793670b48b6 239 Gene3D G3DSA:3.40.50.150 5 237 2.3E-76 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS11745 4dd85b146491a29114149793670b48b6 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 203 1.8E-49 T 23-04-2016 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 SHYC_RS11745 4dd85b146491a29114149793670b48b6 239 SUPERFAMILY SSF53335 4 237 2.34E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 396 53.55 T 23-04-2016 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 SUPERFAMILY SSF69864 170 396 1.16E-91 T 23-04-2016 SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 393 8.1E-161 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 PANTHER PTHR11587 1 401 3.2E-218 T 23-04-2016 SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 SUPERFAMILY SSF52402 1 169 3.53E-48 T 23-04-2016 SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 Gene3D G3DSA:3.40.50.620 1 172 1.2E-59 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 Gene3D G3DSA:3.90.1260.10 173 395 3.8E-88 T 23-04-2016 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 Pfam PF00764 Arginosuccinate synthase 7 390 5.9E-171 T 23-04-2016 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 PANTHER PTHR11587:SF2 1 401 3.2E-218 T 23-04-2016 SHYC_RS09225 38a47f4c925373dd18ec0ec0057bd873 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 23-04-2016 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 288 295 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 SUPERFAMILY SSF89000 834 1011 3.18E-58 T 23-04-2016 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Pfam PF00364 Biotin-requiring enzyme 1082 1144 6.5E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 118 324 6.9E-78 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 156 170 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Pfam PF02785 Biotin carboxylase C-terminal domain 344 451 5.7E-34 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 PANTHER PTHR18866 1 1147 0.0 T 23-04-2016 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 SUPERFAMILY SSF51230 1067 1146 5.89E-22 T 23-04-2016 IPR011053 Single hybrid motif SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 PIRSF PIRSF001594 1 1147 0.0 T 23-04-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 SMART SM00878 344 451 1.9E-51 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Gene3D G3DSA:1.10.10.60 952 988 1.1E-20 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Gene3D G3DSA:2.40.50.100 1070 1146 2.4E-26 T 23-04-2016 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Pfam PF00682 HMGL-like 533 797 2.0E-23 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Gene3D G3DSA:3.20.20.70 510 820 4.7E-129 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 SUPERFAMILY SSF56059 86 331 1.27E-66 T 23-04-2016 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Gene3D G3DSA:3.40.50.20 4 132 1.1E-47 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Pfam PF00289 Biotin carboxylase, N-terminal domain 4 111 2.7E-42 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Pfam PF02436 Conserved carboxylase domain 829 1028 2.6E-76 T 23-04-2016 IPR003379 Carboxylase, conserved domain SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 PANTHER PTHR18866:SF103 1 1147 0.0 T 23-04-2016 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Gene3D G3DSA:3.30.1490.20 133 205 4.5E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 6 1146 0.0 T 23-04-2016 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|UniPathway: UPA00138 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 SUPERFAMILY SSF52440 2 115 5.4E-45 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 SUPERFAMILY SSF51246 340 457 6.28E-38 T 23-04-2016 IPR011054 Rudiment single hybrid motif SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Gene3D G3DSA:3.30.470.20 206 457 1.9E-97 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 SUPERFAMILY SSF51569 525 837 1.54E-79 T 23-04-2016 SHYC_RS08510 15727f6ae64807a934bbff1fef195c1c 1150 Gene3D G3DSA:3.10.600.10 989 1065 6.3E-34 T 23-04-2016 SHYC_RS11285 1ad9518b6b2ccba27d2f3a141a8147f4 97 Pfam PF06013 Proteins of 100 residues with WXG 4 88 6.7E-23 T 23-04-2016 IPR010310 Type VII secretion system ESAT-6-like SHYC_RS11285 1ad9518b6b2ccba27d2f3a141a8147f4 97 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 3 90 1.7E-23 T 23-04-2016 IPR010310 Type VII secretion system ESAT-6-like SHYC_RS11285 1ad9518b6b2ccba27d2f3a141a8147f4 97 SUPERFAMILY SSF140453 3 95 2.09E-21 T 23-04-2016 IPR010310 Type VII secretion system ESAT-6-like SHYC_RS11285 1ad9518b6b2ccba27d2f3a141a8147f4 97 Gene3D G3DSA:1.10.287.1060 3 94 7.4E-15 T 23-04-2016 SHYC_RS06400 107865c71f3e04da381f5f705941c208 155 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 2 149 1.5E-86 T 23-04-2016 IPR013404 Competence operon E, ComEB SHYC_RS06400 107865c71f3e04da381f5f705941c208 155 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 116 1.2E-29 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SHYC_RS06400 107865c71f3e04da381f5f705941c208 155 PANTHER PTHR11086 1 138 5.3E-65 T 23-04-2016 IPR015517 Deoxycytidylate deaminase-related SHYC_RS06400 107865c71f3e04da381f5f705941c208 155 SUPERFAMILY SSF53927 7 140 4.78E-41 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHYC_RS06400 107865c71f3e04da381f5f705941c208 155 Gene3D G3DSA:3.40.140.10 5 142 9.3E-45 T 23-04-2016 SHYC_RS06400 107865c71f3e04da381f5f705941c208 155 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 105 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SHYC_RS06400 107865c71f3e04da381f5f705941c208 155 PIRSF PIRSF006019 1 149 6.7E-61 T 23-04-2016 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210 SHYC_RS00645 113149b0dbf61b8fee118b9fe069da78 329 SUPERFAMILY SSF53807 37 322 5.23E-60 T 23-04-2016 SHYC_RS00645 113149b0dbf61b8fee118b9fe069da78 329 PANTHER PTHR30532:SF3 1 322 2.5E-129 T 23-04-2016 SHYC_RS00645 113149b0dbf61b8fee118b9fe069da78 329 Gene3D G3DSA:3.40.50.1980 160 324 1.9E-30 T 23-04-2016 SHYC_RS00645 113149b0dbf61b8fee118b9fe069da78 329 PANTHER PTHR30532 1 322 2.5E-129 T 23-04-2016 SHYC_RS00645 113149b0dbf61b8fee118b9fe069da78 329 Pfam PF01497 Periplasmic binding protein 55 294 2.1E-28 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHYC_RS00645 113149b0dbf61b8fee118b9fe069da78 329 Gene3D G3DSA:3.40.50.1980 35 159 5.6E-39 T 23-04-2016 SHYC_RS09450 76ec9bb7109159844e79a7db8586c1c9 256 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 5 245 1.0E-112 T 23-04-2016 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 SHYC_RS09450 76ec9bb7109159844e79a7db8586c1c9 256 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS09450 76ec9bb7109159844e79a7db8586c1c9 256 SMART SM00382 29 225 1.6E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS09450 76ec9bb7109159844e79a7db8586c1c9 256 Pfam PF00005 ABC transporter 20 172 7.5E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS09450 76ec9bb7109159844e79a7db8586c1c9 256 PANTHER PTHR24220 6 248 1.5E-135 T 23-04-2016 SHYC_RS09450 76ec9bb7109159844e79a7db8586c1c9 256 Gene3D G3DSA:3.40.50.300 4 234 4.2E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09450 76ec9bb7109159844e79a7db8586c1c9 256 SUPERFAMILY SSF52540 4 232 1.52E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09450 76ec9bb7109159844e79a7db8586c1c9 256 PANTHER PTHR24220:SF85 6 248 1.5E-135 T 23-04-2016 SHYC_RS07345 67cfe43800140898ed90c25320ce9323 364 Gene3D G3DSA:3.40.50.720 2 180 8.2E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07345 67cfe43800140898ed90c25320ce9323 364 Pfam PF02153 Prephenate dehydrogenase 17 273 2.4E-66 T 23-04-2016 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 SHYC_RS07345 67cfe43800140898ed90c25320ce9323 364 SUPERFAMILY SSF51735 3 170 5.62E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07345 67cfe43800140898ed90c25320ce9323 364 Gene3D G3DSA:3.30.70.260 302 357 4.6E-4 T 23-04-2016 SHYC_RS07345 67cfe43800140898ed90c25320ce9323 364 PANTHER PTHR21363:SF0 1 355 9.8E-74 T 23-04-2016 SHYC_RS07345 67cfe43800140898ed90c25320ce9323 364 PANTHER PTHR21363 1 355 9.8E-74 T 23-04-2016 SHYC_RS07345 67cfe43800140898ed90c25320ce9323 364 SUPERFAMILY SSF48179 175 283 1.7E-33 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS07345 67cfe43800140898ed90c25320ce9323 364 SUPERFAMILY SSF55021 295 348 1.35E-6 T 23-04-2016 SHYC_RS07345 67cfe43800140898ed90c25320ce9323 364 Gene3D G3DSA:1.10.3660.10 221 282 9.2E-5 T 23-04-2016 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 PANTHER PTHR11811:SF25 1 467 4.3E-293 T 23-04-2016 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 173 2.2E-49 T 23-04-2016 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 PANTHER PTHR11811 1 467 4.3E-293 T 23-04-2016 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 23-04-2016 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 467 2.0E-220 T 23-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 Gene3D G3DSA:3.40.50.720 1 179 2.3E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 Gene3D G3DSA:1.20.5.320 434 467 1.9E-22 T 23-04-2016 IPR012284 6-phosphogluconate dehydrogenase, domain 3 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 SUPERFAMILY SSF51735 3 173 8.98E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 Gene3D G3DSA:1.10.1040.10 180 432 2.0E-113 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 SUPERFAMILY SSF48179 176 466 1.7E-127 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 355 377 1.2E-86 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 118 143 1.2E-86 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 1.2E-86 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 65 94 1.2E-86 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 1.2E-86 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.2E-86 T 23-04-2016 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 PIRSF PIRSF000109 1 467 1.3E-236 T 23-04-2016 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 465 1.3E-129 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS06830 7c0b829146afdfc2becb7fddf60e8894 467 SMART SM01350 178 466 3.6E-216 T 23-04-2016 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|UniPathway: UPA00115 SHYC_RS09475 6e15091f09e909e433572d41546ce959 106 Pfam PF00085 Thioredoxin 6 88 9.3E-7 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 SHYC_RS09475 6e15091f09e909e433572d41546ce959 106 Gene3D G3DSA:3.40.30.10 8 100 3.6E-12 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09475 6e15091f09e909e433572d41546ce959 106 SUPERFAMILY SSF52833 11 101 4.75E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09475 6e15091f09e909e433572d41546ce959 106 PANTHER PTHR10438 13 105 1.2E-21 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHYC_RS09475 6e15091f09e909e433572d41546ce959 106 PANTHER PTHR10438:SF279 13 105 1.2E-21 T 23-04-2016 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 31 449 6.9E-131 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 451 32.769 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 Gene3D G3DSA:3.40.1190.10 95 312 4.0E-64 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 Gene3D G3DSA:3.90.190.20 315 451 3.5E-45 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 Pfam PF08245 Mur ligase middle domain 111 294 7.0E-45 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 395 1.8E-13 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 SUPERFAMILY SSF53623 105 312 6.67E-52 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 PANTHER PTHR23135:SF3 13 455 1.8E-163 T 23-04-2016 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 Pfam PF01225 Mur ligase family, catalytic domain 26 100 1.5E-11 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 SUPERFAMILY SSF53244 316 450 4.21E-40 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 Gene3D G3DSA:3.40.1390.10 22 94 4.7E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 PANTHER PTHR23135 13 455 1.8E-163 T 23-04-2016 SHYC_RS03790 26b28d06450bf6163eedf78b53485f0b 456 SUPERFAMILY SSF63418 1 102 3.53E-23 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1462 1493 1.1E-5 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF117074 1134 1246 7.45E-21 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF117074 666 770 7.45E-20 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF00746 Gram positive anchor 1460 1491 7.0E-5 T 23-04-2016 IPR019948 Gram-positive anchor SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF117074 548 654 3.01E-20 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.1280 16 182 5.4E-36 T 23-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF117074 1251 1362 7.06E-22 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF117074 431 537 2.75E-20 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.1290 183 349 1.0E-35 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 PANTHER PTHR23303 334 1341 1.8E-123 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF117074 895 997 3.66E-20 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF49401 169 357 1.74E-31 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF117074 1017 1119 1.44E-20 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 PANTHER PTHR23303:SF17 334 1341 1.8E-123 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 172 319 1.6E-21 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF05738 Cna protein B-type domain 596 647 5.0E-12 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF05738 Cna protein B-type domain 947 999 1.2E-12 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF05738 Cna protein B-type domain 713 765 3.3E-10 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF05738 Cna protein B-type domain 1064 1116 2.6E-11 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF05738 Cna protein B-type domain 830 882 1.2E-12 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF05738 Cna protein B-type domain 1298 1350 1.5E-12 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF05738 Cna protein B-type domain 479 531 1.0E-12 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF05738 Cna protein B-type domain 360 422 1.1E-10 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Pfam PF05738 Cna protein B-type domain 1181 1234 2.9E-12 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF117074 785 879 2.35E-20 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF117074 311 423 1.06E-20 T 23-04-2016 SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.10 1045 1116 1.4E-25 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.10 460 530 2.8E-24 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.10 1279 1350 2.3E-26 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.10 929 1000 1.8E-24 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.10 1162 1230 3.9E-25 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.10 694 760 1.1E-24 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.10 577 643 5.7E-24 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.10 350 407 3.4E-23 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 Gene3D G3DSA:2.60.40.10 811 877 1.4E-23 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS11780 f8ea1a1e69f688657d6eddec42f62cf7 1501 SUPERFAMILY SSF49401 15 160 8.7E-29 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS07510 60de5e7fcf29727a30e797a12baef9fb 486 PIRSF PIRSF006060 1 485 5.2E-77 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS07510 60de5e7fcf29727a30e797a12baef9fb 486 PANTHER PTHR11785 2 479 2.8E-177 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS07510 60de5e7fcf29727a30e797a12baef9fb 486 Pfam PF00324 Amino acid permease 14 466 1.6E-121 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SHYC_RS07510 60de5e7fcf29727a30e797a12baef9fb 486 PANTHER PTHR11785:SF204 2 479 2.8E-177 T 23-04-2016 SHYC_RS07510 60de5e7fcf29727a30e797a12baef9fb 486 ProSitePatterns PS00218 Amino acid permeases signature. 39 70 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SHYC_RS06485 8ebcd96930efd11445d60093ea31cb07 315 Pfam PF02562 PhoH-like protein 109 312 1.7E-91 T 23-04-2016 IPR003714 PhoH-like protein GO:0005524 SHYC_RS06485 8ebcd96930efd11445d60093ea31cb07 315 PANTHER PTHR30473 4 315 1.3E-158 T 23-04-2016 SHYC_RS06485 8ebcd96930efd11445d60093ea31cb07 315 Gene3D G3DSA:3.40.50.300 109 312 1.9E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06485 8ebcd96930efd11445d60093ea31cb07 315 PANTHER PTHR30473:SF1 4 315 1.3E-158 T 23-04-2016 SHYC_RS06485 8ebcd96930efd11445d60093ea31cb07 315 SUPERFAMILY SSF52540 108 287 9.14E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 3.1E-79 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 PANTHER PTHR30053 1 185 3.8E-91 T 23-04-2016 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 SUPERFAMILY SSF50249 128 185 4.11E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 49.841 T 23-04-2016 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 UniPathway: UPA00345 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 121 2.9E-20 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 1.8E-27 T 23-04-2016 IPR013185 Translation elongation factor, KOW-like UniPathway: UPA00345 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.7E-26 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 SUPERFAMILY SSF50249 65 129 3.0E-19 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 Gene3D G3DSA:2.40.50.140 128 185 7.5E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 PIRSF PIRSF005901 1 185 2.5E-70 T 23-04-2016 IPR020599 Translation elongation factor P/YeiP UniPathway: UPA00345 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 Gene3D G3DSA:2.30.30.30 1 63 8.6E-33 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 SMART SM01185 67 121 8.5E-24 T 23-04-2016 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 UniPathway: UPA00345 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 Gene3D G3DSA:2.40.50.140 65 127 3.1E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 23-04-2016 IPR013852 Translation elongation factor P/YeiP, conserved site UniPathway: UPA00345 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 SMART SM00841 129 184 6.0E-32 T 23-04-2016 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 UniPathway: UPA00345 SHYC_RS06730 bdd68f62419a3254ae78e250bcedc8b8 185 SUPERFAMILY SSF50104 1 62 1.02E-21 T 23-04-2016 IPR008991 Translation protein SH3-like domain SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 Pfam PF03099 Biotin/lipoate A/B protein ligase family 96 212 1.5E-13 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 PANTHER PTHR12835 18 321 9.4E-68 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 SUPERFAMILY SSF46785 2 60 2.07E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 Pfam PF02237 Biotin protein ligase C terminal domain 279 323 4.3E-5 T 23-04-2016 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15 SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 Gene3D G3DSA:1.10.10.10 3 61 5.4E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 323 29.721 T 23-04-2016 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 SUPERFAMILY SSF55681 73 273 1.08E-56 T 23-04-2016 SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 85 322 3.0E-58 T 23-04-2016 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 Pfam PF08279 HTH domain 8 59 1.0E-12 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 SUPERFAMILY SSF50037 280 322 5.04E-5 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal SHYC_RS07040 3deec160aa3dd6972a106ee949bb14b0 323 Gene3D G3DSA:3.30.930.10 73 274 1.5E-59 T 23-04-2016 SHYC_RS05510 85f9e7d63059a922558ca27731504f32 156 PANTHER PTHR22769:SF26 36 127 2.1E-18 T 23-04-2016 SHYC_RS05510 85f9e7d63059a922558ca27731504f32 156 Gene3D G3DSA:3.90.79.10 34 131 7.2E-16 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHYC_RS05510 85f9e7d63059a922558ca27731504f32 156 SUPERFAMILY SSF55811 27 108 3.25E-17 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHYC_RS05510 85f9e7d63059a922558ca27731504f32 156 Pfam PF00293 NUDIX domain 31 103 7.7E-9 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SHYC_RS05510 85f9e7d63059a922558ca27731504f32 156 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 2 154 2.1E-50 T 23-04-2016 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 SHYC_RS05510 85f9e7d63059a922558ca27731504f32 156 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SHYC_RS05510 85f9e7d63059a922558ca27731504f32 156 PANTHER PTHR22769 36 127 2.1E-18 T 23-04-2016 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 8 433 1.2E-103 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 Pfam PF00083 Sugar (and other) transporter 10 436 2.0E-113 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 79 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 Gene3D G3DSA:1.20.1250.20 241 435 6.0E-27 T 23-04-2016 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 Gene3D G3DSA:1.20.1250.20 9 194 5.0E-31 T 23-04-2016 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 SUPERFAMILY SSF103473 5 434 8.37E-79 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 104 129 - T 23-04-2016 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 PANTHER PTHR23500 7 440 1.3E-158 T 23-04-2016 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 PRINTS PR00171 Sugar transporter signature 361 373 2.75E-28 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 PRINTS PR00171 Sugar transporter signature 99 118 2.75E-28 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 PRINTS PR00171 Sugar transporter signature 16 26 2.75E-28 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 PRINTS PR00171 Sugar transporter signature 250 260 2.75E-28 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SHYC_RS02510 53701aa58247b1431cce79ccc81a60cb 446 PRINTS PR00171 Sugar transporter signature 338 359 2.75E-28 T 23-04-2016 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 Reactome: REACT_15518 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 SUPERFAMILY SSF56235 53 528 1.58E-94 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PANTHER PTHR11686 9 513 2.5E-71 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PANTHER PTHR11686:SF9 9 513 2.5E-71 T 23-04-2016 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 242 258 5.7E-36 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 152 171 5.7E-36 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 77 102 5.7E-36 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 271 290 5.7E-36 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 134 152 5.7E-36 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 360 378 5.7E-36 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 383 401 5.7E-36 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 437 454 5.7E-36 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 414 429 5.7E-36 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS01480 ef90d0a854f5c949902e9d0741a8a6c4 532 Pfam PF01019 Gamma-glutamyltranspeptidase 70 528 7.9E-80 T 23-04-2016 IPR000101 Gamma-glutamyltranspeptidase GO:0003840|GO:0006749 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 PANTHER PTHR10887 290 600 9.8E-116 T 23-04-2016 SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 PANTHER PTHR10887 674 790 9.8E-116 T 23-04-2016 SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 PANTHER PTHR10887:SF284 290 600 9.8E-116 T 23-04-2016 SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 PANTHER PTHR10887:SF284 674 790 9.8E-116 T 23-04-2016 SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 SMART SM00382 352 509 5.3E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 Pfam PF13604 AAA domain 339 544 1.2E-50 T 23-04-2016 SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 Gene3D G3DSA:3.40.50.300 307 526 1.7E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 SUPERFAMILY SSF52540 565 734 1.95E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 SUPERFAMILY SSF52540 460 527 1.95E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 12 741 4.0E-286 T 23-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 Pfam PF14490 Helix-hairpin-helix containing domain 153 243 7.3E-30 T 23-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 SUPERFAMILY SSF52540 191 508 7.99E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 Pfam PF13538 UvrD-like helicase C-terminal domain 673 719 1.3E-14 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 Gene3D G3DSA:3.40.50.300 121 172 2.9E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 Gene3D G3DSA:3.40.50.300 665 728 2.9E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06270 f34f1a4cbec4795b3e2b4b9b08529751 790 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 9 776 28.584 T 23-04-2016 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 TIGRFAM TIGR00492 alr: alanine racemase 6 330 1.2E-53 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 SMART SM01005 234 356 7.2E-20 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 SUPERFAMILY SSF50621 229 346 3.49E-23 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 Pfam PF00842 Alanine racemase, C-terminal domain 235 331 3.7E-18 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 Pfam PF01168 Alanine racemase, N-terminal domain 8 222 1.6E-40 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 Hamap MF_01201 Alanine racemase. 1 356 19.663 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 Gene3D G3DSA:3.20.20.10 12 215 1.8E-41 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 PRINTS PR00992 Alanine racemase signature 113 125 1.4E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 PRINTS PR00992 Alanine racemase signature 58 76 1.4E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 PRINTS PR00992 Alanine racemase signature 150 161 1.4E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 PRINTS PR00992 Alanine racemase signature 288 305 1.4E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 PRINTS PR00992 Alanine racemase signature 195 222 1.4E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 PRINTS PR00992 Alanine racemase signature 268 283 1.4E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 PRINTS PR00992 Alanine racemase signature 22 38 1.4E-21 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 Gene3D G3DSA:2.40.37.10 216 341 4.4E-30 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 PANTHER PTHR30511:SF0 1 356 5.3E-87 T 23-04-2016 SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 SUPERFAMILY SSF51419 7 227 2.62E-37 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS07275 8d9f3c128159b6a0dbf766a9a799bd60 356 PANTHER PTHR30511 1 356 5.3E-87 T 23-04-2016 SHYC_RS09445 b25e4f3ecfcd5324bde2007ac5e4dc9b 435 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 150 424 1.6E-73 T 23-04-2016 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 SHYC_RS09445 b25e4f3ecfcd5324bde2007ac5e4dc9b 435 PANTHER PTHR30508:SF0 2 433 5.0E-153 T 23-04-2016 SHYC_RS09445 b25e4f3ecfcd5324bde2007ac5e4dc9b 435 Pfam PF01458 Uncharacterized protein family (UPF0051) 183 408 9.3E-58 T 23-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SHYC_RS09445 b25e4f3ecfcd5324bde2007ac5e4dc9b 435 SUPERFAMILY SSF101960 14 433 1.31E-111 T 23-04-2016 SHYC_RS09445 b25e4f3ecfcd5324bde2007ac5e4dc9b 435 PANTHER PTHR30508 2 433 5.0E-153 T 23-04-2016 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 PANTHER PTHR11739 3 372 3.9E-159 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 Gene3D G3DSA:1.10.580.10 13 233 3.6E-81 T 23-04-2016 IPR016142 Citrate synthase-like, large alpha subdomain UniPathway: UPA00223 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 SUPERFAMILY SSF48256 4 372 9.55E-131 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 PRINTS PR00143 Citrate synthase signature 173 188 1.1E-40 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 PRINTS PR00143 Citrate synthase signature 248 268 1.1E-40 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 PRINTS PR00143 Citrate synthase signature 195 223 1.1E-40 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 PRINTS PR00143 Citrate synthase signature 325 339 1.1E-40 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 PRINTS PR00143 Citrate synthase signature 305 321 1.1E-40 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 Gene3D G3DSA:1.10.230.10 234 319 1.6E-38 T 23-04-2016 IPR016143 Citrate synthase-like, small alpha subdomain SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 Pfam PF00285 Citrate synthase, C-terminal domain 7 355 1.8E-127 T 23-04-2016 IPR002020 Citrate synthase GO:0046912 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 ProSitePatterns PS00480 Citrate synthase signature. 255 267 - T 23-04-2016 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 UniPathway: UPA00223 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 6 372 3.7E-150 T 23-04-2016 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 PIRSF PIRSF001369 1 372 7.7E-150 T 23-04-2016 IPR024176 Citrate synthase, bacterial-type UniPathway: UPA00223 SHYC_RS05955 0d7941a0dda3e4e977e7936a708a1783 372 PANTHER PTHR11739:SF4 3 372 3.9E-159 T 23-04-2016 SHYC_RS09730 469a4d208566b4dcf808f01b81be6817 429 SUPERFAMILY SSF52540 111 399 2.02E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09730 469a4d208566b4dcf808f01b81be6817 429 Pfam PF04851 Type III restriction enzyme, res subunit 95 242 4.2E-14 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SHYC_RS09730 469a4d208566b4dcf808f01b81be6817 429 Pfam PF00271 Helicase conserved C-terminal domain 285 388 1.8E-9 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS09730 469a4d208566b4dcf808f01b81be6817 429 Gene3D G3DSA:3.40.50.300 282 411 1.8E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09730 469a4d208566b4dcf808f01b81be6817 429 Gene3D G3DSA:3.40.50.300 86 246 9.7E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09730 469a4d208566b4dcf808f01b81be6817 429 SMART SM00490 310 389 1.0E-4 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS09730 469a4d208566b4dcf808f01b81be6817 429 SMART SM00487 91 274 1.4E-12 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS06620 a3e63972fd194e3a49e67ef3f174c717 49 PANTHER PTHR15238:SF3 1 49 1.6E-21 T 23-04-2016 SHYC_RS06620 a3e63972fd194e3a49e67ef3f174c717 49 PANTHER PTHR15238 1 49 1.6E-21 T 23-04-2016 SHYC_RS06620 a3e63972fd194e3a49e67ef3f174c717 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.606 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06620 a3e63972fd194e3a49e67ef3f174c717 49 Pfam PF00471 Ribosomal protein L33 3 49 6.6E-22 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06620 a3e63972fd194e3a49e67ef3f174c717 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 3.7E-21 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06620 a3e63972fd194e3a49e67ef3f174c717 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06620 a3e63972fd194e3a49e67ef3f174c717 49 SUPERFAMILY SSF57829 1 49 7.69E-19 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 Pfam PF00453 Ribosomal protein L20 3 109 4.8E-49 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 PANTHER PTHR10986 2 117 3.8E-64 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 72 1.0E-14 T 23-04-2016 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 Gene3D G3DSA:1.10.1900.20 55 117 4.6E-32 T 23-04-2016 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.0E-51 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.2E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.2E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.2E-41 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.678 T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 SUPERFAMILY SSF74731 2 117 4.19E-50 T 23-04-2016 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 PANTHER PTHR10986:SF12 2 117 3.8E-64 T 23-04-2016 SHYC_RS06030 2e7aa070a0d578a0d2a714dc8489b4a7 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 23-04-2016 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 SHYC_RS10465 bee4313d483e577d7dad906d9eb9e5e2 215 Gene3D G3DSA:2.40.50.100 42 115 3.8E-13 T 23-04-2016 SHYC_RS10465 bee4313d483e577d7dad906d9eb9e5e2 215 Pfam PF13437 HlyD family secretion protein 91 198 2.0E-11 T 23-04-2016 SHYC_RS10465 bee4313d483e577d7dad906d9eb9e5e2 215 Pfam PF13533 Biotin-lipoyl like 45 75 1.7E-7 T 23-04-2016 SHYC_RS10465 bee4313d483e577d7dad906d9eb9e5e2 215 PANTHER PTHR30386:SF0 40 215 5.2E-33 T 23-04-2016 SHYC_RS10465 bee4313d483e577d7dad906d9eb9e5e2 215 PANTHER PTHR30386 40 215 5.2E-33 T 23-04-2016 SHYC_RS10465 bee4313d483e577d7dad906d9eb9e5e2 215 SUPERFAMILY SSF51230 38 115 1.16E-8 T 23-04-2016 IPR011053 Single hybrid motif SHYC_RS08060 e9833dc0276af0268319f6e0080219a4 289 PANTHER PTHR30182 1 288 8.2E-139 T 23-04-2016 SHYC_RS08060 e9833dc0276af0268319f6e0080219a4 289 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 288 2.0E-134 T 23-04-2016 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SHYC_RS08060 e9833dc0276af0268319f6e0080219a4 289 Pfam PF03313 Serine dehydratase alpha chain 17 274 3.0E-75 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SHYC_RS10140 75bd2a08ddbdd9da7d7a589582e39dd2 168 Gene3D G3DSA:3.40.630.30 1 160 2.5E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10140 75bd2a08ddbdd9da7d7a589582e39dd2 168 SUPERFAMILY SSF55729 1 160 1.71E-40 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10140 75bd2a08ddbdd9da7d7a589582e39dd2 168 Pfam PF13302 Acetyltransferase (GNAT) domain 2 135 1.2E-19 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS10140 75bd2a08ddbdd9da7d7a589582e39dd2 168 PANTHER PTHR13256 1 167 8.4E-55 T 23-04-2016 SHYC_RS10140 75bd2a08ddbdd9da7d7a589582e39dd2 168 PANTHER PTHR13256:SF21 1 167 8.4E-55 T 23-04-2016 SHYC_RS08840 912e9a2044fb23378072d4dafc7d083a 397 SUPERFAMILY SSF53756 4 390 2.09E-28 T 23-04-2016 SHYC_RS08840 912e9a2044fb23378072d4dafc7d083a 397 Pfam PF00534 Glycosyl transferases group 1 217 374 2.6E-8 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 412 1.2E-140 T 23-04-2016 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.3E-8 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 2.3E-8 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 2.3E-8 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 SUPERFAMILY SSF160996 193 361 1.19E-45 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PANTHER PTHR10617 351 416 1.1E-120 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PANTHER PTHR10617 222 310 1.1E-120 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PANTHER PTHR10617 3 197 1.1E-120 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 Pfam PF03486 HI0933-like protein 4 413 6.1E-153 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 1.1E-6 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.1E-6 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 Gene3D G3DSA:3.50.50.60 3 190 9.5E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 Gene3D G3DSA:3.50.50.60 360 412 9.5E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 Gene3D G3DSA:2.40.30.10 193 287 9.8E-21 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PANTHER PTHR10617:SF103 351 416 1.1E-120 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PANTHER PTHR10617:SF103 222 310 1.1E-120 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 PANTHER PTHR10617:SF103 3 197 1.1E-120 T 23-04-2016 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 SUPERFAMILY SSF51905 3 194 1.15E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05665 19a944e5947eaf9fe0836e32284f3d6d 420 SUPERFAMILY SSF51905 358 415 1.15E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS10310 6c567a633fb40c3c425d9b959a729e34 500 Pfam PF00361 Proton-conducting membrane transporter 129 416 6.7E-54 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SHYC_RS10310 6c567a633fb40c3c425d9b959a729e34 500 PANTHER PTHR22773:SF49 1 496 1.9E-155 T 23-04-2016 SHYC_RS10310 6c567a633fb40c3c425d9b959a729e34 500 PANTHER PTHR22773 1 496 1.9E-155 T 23-04-2016 SHYC_RS10310 6c567a633fb40c3c425d9b959a729e34 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 1.1E-13 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SHYC_RS10310 6c567a633fb40c3c425d9b959a729e34 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 163 187 1.1E-13 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SHYC_RS10310 6c567a633fb40c3c425d9b959a729e34 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 133 152 1.1E-13 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SHYC_RS10310 6c567a633fb40c3c425d9b959a729e34 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 1.1E-13 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SHYC_RS10310 6c567a633fb40c3c425d9b959a729e34 500 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 1.1E-13 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SHYC_RS04195 07fb03e2dcace78187258a2f7d65b49b 229 PANTHER PTHR40029:SF2 1 228 5.1E-139 T 23-04-2016 SHYC_RS04195 07fb03e2dcace78187258a2f7d65b49b 229 PANTHER PTHR40029 1 228 5.1E-139 T 23-04-2016 SHYC_RS04195 07fb03e2dcace78187258a2f7d65b49b 229 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 1 229 82.163 T 23-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 SHYC_RS04195 07fb03e2dcace78187258a2f7d65b49b 229 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 8 222 1.0E-62 T 23-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 SHYC_RS04195 07fb03e2dcace78187258a2f7d65b49b 229 Gene3D G3DSA:3.20.20.390 2 224 2.2E-72 T 23-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 SHYC_RS04195 07fb03e2dcace78187258a2f7d65b49b 229 SUPERFAMILY SSF51395 4 223 9.16E-45 T 23-04-2016 SHYC_RS04195 07fb03e2dcace78187258a2f7d65b49b 229 Pfam PF01884 PcrB family 2 223 3.9E-73 T 23-04-2016 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 UniPathway: UPA00940 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 SUPERFAMILY SSF54373 250 345 3.4E-13 T 23-04-2016 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 374 384 - T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 Gene3D G3DSA:3.50.50.60 14 322 1.8E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 Gene3D G3DSA:3.50.50.60 437 461 1.8E-48 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 PANTHER PTHR11985:SF1 5 553 2.3E-222 T 23-04-2016 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 26 43 - T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 SUPERFAMILY SSF51905 158 239 5.47E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 SUPERFAMILY SSF51905 13 123 5.47E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 Pfam PF01266 FAD dependent oxidoreductase 22 353 1.3E-52 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 PANTHER PTHR11985 5 553 2.3E-222 T 23-04-2016 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 407 532 2.1E-20 T 23-04-2016 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 21 33 8.1E-31 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 369 381 8.1E-31 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 339 345 8.1E-31 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 50 62 8.1E-31 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 34 44 8.1E-31 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SHYC_RS07650 9ccf312aff8beba3d4db5a73cd1d3244 557 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 95 107 8.1E-31 T 23-04-2016 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 Pfam PF07650 KH domain 206 283 8.1E-24 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 Gene3D G3DSA:3.40.50.300 8 189 4.4E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 Hamap MF_00367 GTPase Era [era]. 4 294 38.558 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 166 1.0E-27 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 SUPERFAMILY SSF54814 180 294 1.05E-41 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 Gene3D G3DSA:3.30.300.20 190 290 1.1E-41 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 PANTHER PTHR11649 5 298 1.1E-123 T 23-04-2016 SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 TIGRFAM TIGR00436 era: GTP-binding protein Era 7 277 1.6E-104 T 23-04-2016 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 PANTHER PTHR11649:SF3 5 298 1.1E-123 T 23-04-2016 SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 SUPERFAMILY SSF52540 6 179 3.37E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06505 3059b3f3b1454ec6d3cd8e8be218fef4 298 Pfam PF01926 50S ribosome-binding GTPase 9 123 8.0E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 SMART SM00421 145 202 9.1E-25 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 Pfam PF00072 Response regulator receiver domain 5 117 2.3E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 1.6E-19 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 Gene3D G3DSA:3.40.50.2300 1 120 2.1E-35 T 23-04-2016 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 SMART SM00448 3 116 2.5E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 SUPERFAMILY SSF52172 2 128 2.42E-33 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 PANTHER PTHR26402:SF151 3 208 7.7E-87 T 23-04-2016 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 SUPERFAMILY SSF46894 132 208 9.86E-24 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 PANTHER PTHR26402 3 208 7.7E-87 T 23-04-2016 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 Gene3D G3DSA:1.10.10.10 121 208 6.4E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 8.3E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 8.3E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS04305 f7b9f95e1309f1b1bf68d77d0559f1fe 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 8.3E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS11400 5309f58205cd1d47072da464c67fff16 540 SUPERFAMILY SSF101094 54 163 1.23E-12 T 23-04-2016 IPR014874 Staphylcoagulase, N-terminal SHYC_RS11400 5309f58205cd1d47072da464c67fff16 540 SUPERFAMILY SSF101094 164 283 8.37E-19 T 23-04-2016 IPR014874 Staphylcoagulase, N-terminal SHYC_RS11400 5309f58205cd1d47072da464c67fff16 540 Pfam PF08764 Staphylococcus aureus coagulase 53 272 2.6E-14 T 23-04-2016 IPR014874 Staphylcoagulase, N-terminal SHYC_RS08445 9a3364b6a4ce055121a02abec064894f 57 PANTHER PTHR21026:SF2 1 57 4.6E-27 T 23-04-2016 SHYC_RS08445 9a3364b6a4ce055121a02abec064894f 57 Pfam PF01783 Ribosomal L32p protein family 2 57 1.7E-28 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SHYC_RS08445 9a3364b6a4ce055121a02abec064894f 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 9.7E-30 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SHYC_RS08445 9a3364b6a4ce055121a02abec064894f 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 21.255 T 23-04-2016 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 SHYC_RS08445 9a3364b6a4ce055121a02abec064894f 57 PANTHER PTHR21026 1 57 4.6E-27 T 23-04-2016 SHYC_RS08445 9a3364b6a4ce055121a02abec064894f 57 SUPERFAMILY SSF57829 1 55 3.3E-24 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SHYC_RS07245 f55446d5b983375342f3eee1f1364c54 211 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 9 197 1.2E-52 T 23-04-2016 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 Gene3D G3DSA:1.10.510.10 77 266 3.4E-58 T 23-04-2016 SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 Pfam PF03793 PASTA domain 436 496 1.2E-10 T 23-04-2016 IPR005543 PASTA domain SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 Pfam PF03793 PASTA domain 367 429 3.2E-14 T 23-04-2016 IPR005543 PASTA domain SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 Pfam PF03793 PASTA domain 505 566 2.3E-9 T 23-04-2016 IPR005543 PASTA domain SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 SMART SM00740 430 499 9.6E-9 T 23-04-2016 IPR005543 PASTA domain SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 SMART SM00740 362 429 1.1E-17 T 23-04-2016 IPR005543 PASTA domain SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 SMART SM00740 500 566 3.7E-11 T 23-04-2016 IPR005543 PASTA domain SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 SUPERFAMILY SSF56112 7 308 2.83E-81 T 23-04-2016 IPR011009 Protein kinase-like domain SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 39 - T 23-04-2016 IPR017441 Protein kinase, ATP binding site GO:0005524 SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 PANTHER PTHR24362:SF160 1 334 5.7E-111 T 23-04-2016 SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 PANTHER PTHR24362 1 334 5.7E-111 T 23-04-2016 SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 SMART SM00220 10 267 5.2E-75 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 Pfam PF00069 Protein kinase domain 10 264 8.4E-60 T 23-04-2016 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 23-04-2016 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 SHYC_RS08105 72082cc1cf711c7f712b83b6e1ab9d06 659 Gene3D G3DSA:3.30.200.20 2 76 1.8E-25 T 23-04-2016 SHYC_RS08950 e94185cc6e842ef712e8965c1afd1520 212 Pfam PF06338 ComK protein 8 158 2.5E-42 T 23-04-2016 IPR010461 Competence protein ComK GO:0030420 SHYC_RS08950 e94185cc6e842ef712e8965c1afd1520 212 PANTHER PTHR41261 1 193 3.9E-31 T 23-04-2016 SHYC_RS08950 e94185cc6e842ef712e8965c1afd1520 212 PANTHER PTHR41261:SF1 1 193 3.9E-31 T 23-04-2016 SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 11 359 39.052 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 Gene3D G3DSA:3.30.1490.20 123 184 2.6E-19 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 SUPERFAMILY SSF51246 308 367 3.92E-14 T 23-04-2016 IPR011054 Rudiment single hybrid motif SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 Pfam PF02222 ATP-grasp domain 116 283 5.8E-46 T 23-04-2016 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type UniPathway: UPA00074 SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 PANTHER PTHR11609 11 375 1.1E-122 T 23-04-2016 SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 Gene3D G3DSA:3.30.470.20 186 366 6.8E-53 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 9 76 2.1E-6 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 Gene3D G3DSA:3.40.50.20 7 113 5.2E-38 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 11 364 1.0E-111 T 23-04-2016 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 SUPERFAMILY SSF52440 10 103 8.06E-27 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 PANTHER PTHR11609:SF5 11 375 1.1E-122 T 23-04-2016 SHYC_RS08755 9d4096d09fc3cd38d6e3e69bae507406 375 SUPERFAMILY SSF56059 107 302 4.95E-55 T 23-04-2016 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 PANTHER PTHR23501 2 439 5.6E-100 T 23-04-2016 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 PRINTS PR01036 Tetracycline resistance protein TetB signature 101 121 3.4E-14 T 23-04-2016 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 PRINTS PR01036 Tetracycline resistance protein TetB signature 387 406 3.4E-14 T 23-04-2016 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 PRINTS PR01036 Tetracycline resistance protein TetB signature 197 215 3.4E-14 T 23-04-2016 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 PRINTS PR01036 Tetracycline resistance protein TetB signature 131 155 3.4E-14 T 23-04-2016 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 PRINTS PR01036 Tetracycline resistance protein TetB signature 11 35 3.4E-14 T 23-04-2016 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 Pfam PF07690 Major Facilitator Superfamily 13 396 1.2E-37 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 PANTHER PTHR23501:SF71 2 439 5.6E-100 T 23-04-2016 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 Gene3D G3DSA:1.20.1250.20 8 182 6.2E-23 T 23-04-2016 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 Gene3D G3DSA:1.20.1250.20 256 433 6.9E-16 T 23-04-2016 SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 SUPERFAMILY SSF103473 4 186 1.22E-46 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS03365 e0d23570795304c2415ec9396e9acd8c 441 SUPERFAMILY SSF103473 232 433 1.22E-46 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 209 8.2E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 PANTHER PTHR30177 266 503 7.7E-232 T 23-04-2016 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 PANTHER PTHR30177 1 202 7.7E-232 T 23-04-2016 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 235 499 2.8E-62 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 Gene3D G3DSA:1.10.3720.10 8 198 5.3E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 SUPERFAMILY SSF161098 13 198 4.45E-39 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 PANTHER PTHR30177:SF4 266 503 7.7E-232 T 23-04-2016 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 PANTHER PTHR30177:SF4 1 202 7.7E-232 T 23-04-2016 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 Gene3D G3DSA:3.40.190.10 453 503 2.5E-55 T 23-04-2016 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 Gene3D G3DSA:3.40.190.10 230 342 2.5E-55 T 23-04-2016 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 SUPERFAMILY SSF53850 235 502 2.01E-70 T 23-04-2016 SHYC_RS09855 b9c31c7cff7c6805a9ab5dee75532db5 505 Gene3D G3DSA:3.40.190.120 343 441 4.5E-39 T 23-04-2016 SHYC_RS02135 eb4bedc63a317ecc52de6d8161167f22 467 Gene3D G3DSA:3.60.120.10 16 465 6.5E-133 T 23-04-2016 IPR005801 ADC synthase GO:0009058 SHYC_RS02135 eb4bedc63a317ecc52de6d8161167f22 467 Pfam PF00425 chorismate binding enzyme 199 458 1.7E-84 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SHYC_RS02135 eb4bedc63a317ecc52de6d8161167f22 467 PANTHER PTHR11236:SF9 21 464 3.8E-155 T 23-04-2016 SHYC_RS02135 eb4bedc63a317ecc52de6d8161167f22 467 PRINTS PR00095 Anthranilate synthase component I signature 320 333 4.3E-16 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS02135 eb4bedc63a317ecc52de6d8161167f22 467 PRINTS PR00095 Anthranilate synthase component I signature 306 319 4.3E-16 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS02135 eb4bedc63a317ecc52de6d8161167f22 467 PRINTS PR00095 Anthranilate synthase component I signature 400 414 4.3E-16 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS02135 eb4bedc63a317ecc52de6d8161167f22 467 PRINTS PR00095 Anthranilate synthase component I signature 415 429 4.3E-16 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS02135 eb4bedc63a317ecc52de6d8161167f22 467 PANTHER PTHR11236 21 464 3.8E-155 T 23-04-2016 SHYC_RS02135 eb4bedc63a317ecc52de6d8161167f22 467 SUPERFAMILY SSF56322 16 465 1.7E-128 T 23-04-2016 IPR005801 ADC synthase GO:0009058 SHYC_RS02135 eb4bedc63a317ecc52de6d8161167f22 467 Pfam PF04715 Anthranilate synthase component I, N terminal region 19 149 1.2E-25 T 23-04-2016 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058|GO:0016833 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS07465 50e446cbb19f287c2494b5d9ff779c2b 78 Hamap MF_01103 UPF0291 protein . 2 60 16.278 T 23-04-2016 IPR009242 Protein of unknown function DUF896 SHYC_RS07465 50e446cbb19f287c2494b5d9ff779c2b 78 Gene3D G3DSA:1.10.287.540 1 60 7.5E-28 T 23-04-2016 IPR023218 UPF0291 structural domain SHYC_RS07465 50e446cbb19f287c2494b5d9ff779c2b 78 SUPERFAMILY SSF158221 1 42 1.31E-13 T 23-04-2016 SHYC_RS07465 50e446cbb19f287c2494b5d9ff779c2b 78 PANTHER PTHR37300 2 78 7.0E-33 T 23-04-2016 SHYC_RS07465 50e446cbb19f287c2494b5d9ff779c2b 78 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 68 9.2E-32 T 23-04-2016 IPR009242 Protein of unknown function DUF896 SHYC_RS07465 50e446cbb19f287c2494b5d9ff779c2b 78 PANTHER PTHR37300:SF1 2 78 7.0E-33 T 23-04-2016 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 Gene3D G3DSA:3.40.50.1980 235 351 1.0E-25 T 23-04-2016 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 PANTHER PTHR30477:SF1 169 347 2.0E-74 T 23-04-2016 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 PANTHER PTHR30477:SF1 1 124 2.0E-74 T 23-04-2016 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 PRINTS PR00691 Adhesin B signature 60 78 6.3E-8 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 PRINTS PR00691 Adhesin B signature 35 56 6.3E-8 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 PRINTS PR00691 Adhesin B signature 79 98 6.3E-8 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 Gene3D G3DSA:3.40.50.1980 20 139 5.8E-44 T 23-04-2016 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 Gene3D G3DSA:3.40.50.1980 174 234 5.8E-44 T 23-04-2016 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 PRINTS PR00690 Adhesin family signature 35 53 1.5E-7 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 PRINTS PR00690 Adhesin family signature 79 96 1.5E-7 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 PRINTS PR00690 Adhesin family signature 66 79 1.5E-7 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 Pfam PF01297 Zinc-uptake complex component A periplasmic 38 349 2.3E-69 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 PANTHER PTHR30477 169 347 2.0E-74 T 23-04-2016 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 PANTHER PTHR30477 1 124 2.0E-74 T 23-04-2016 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 SUPERFAMILY SSF53807 34 122 2.47E-74 T 23-04-2016 SHYC_RS01305 4ce61768801deac1a77a182326d6eef2 352 SUPERFAMILY SSF53807 175 351 2.47E-74 T 23-04-2016 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 SMART SM00382 37 179 5.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 Pfam PF13177 DNA polymerase III, delta subunit 20 178 5.7E-48 T 23-04-2016 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 9.6E-6 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 9.6E-6 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 SUPERFAMILY SSF48019 244 350 7.74E-12 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 Gene3D G3DSA:3.40.50.300 15 166 7.5E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 PANTHER PTHR11669:SF0 1 505 6.4E-198 T 23-04-2016 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 Gene3D G3DSA:1.10.8.60 167 242 5.5E-31 T 23-04-2016 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 Gene3D G3DSA:1.20.272.10 243 346 8.5E-6 T 23-04-2016 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 233 346 6.2E-6 T 23-04-2016 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 PANTHER PTHR11669 1 505 6.4E-198 T 23-04-2016 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 346 3.4E-138 T 23-04-2016 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 SHYC_RS11100 1e96dfeaffde1f385b26a94fe643d9f1 561 SUPERFAMILY SSF52540 33 222 1.57E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 Gene3D G3DSA:3.30.390.30 332 440 9.1E-33 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PANTHER PTHR22912 1 436 1.4E-142 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 SUPERFAMILY SSF55424 320 439 1.51E-25 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PANTHER PTHR22912:SF140 1 436 1.4E-142 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 425 5.0E-8 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 Gene3D G3DSA:3.50.50.60 113 312 3.8E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 6.0E-13 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 232 246 6.0E-13 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 151 176 6.0E-13 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 6.0E-13 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 2.2E-23 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 107 125 2.2E-23 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 151 169 2.2E-23 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.2E-23 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 2.2E-23 T 23-04-2016 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 SUPERFAMILY SSF51905 2 312 1.54E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 TIGRFAM TIGR03385 CoA_CoA_reduc: CoA-disulfide reductase 4 435 1.9E-180 T 23-04-2016 IPR017758 Coenzyme A disulphide reductase GO:0003756|GO:0050451|GO:0050660|GO:0050661|GO:0055114 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 283 7.4E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09185 35ac61e15ccb1d565dd23b653cd32f42 440 Gene3D G3DSA:3.50.50.60 1 112 6.9E-19 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 Pfam PF00815 Histidinol dehydrogenase 17 413 1.3E-141 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 PIRSF PIRSF000099 3 416 5.5E-149 T 23-04-2016 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 SUPERFAMILY SSF53720 20 410 3.33E-64 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 PRINTS PR00083 Histidinol dehydrogenase signature 307 332 4.5E-73 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 PRINTS PR00083 Histidinol dehydrogenase signature 348 366 4.5E-73 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 PRINTS PR00083 Histidinol dehydrogenase signature 187 212 4.5E-73 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 PRINTS PR00083 Histidinol dehydrogenase signature 216 237 4.5E-73 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 PRINTS PR00083 Histidinol dehydrogenase signature 26 50 4.5E-73 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 PRINTS PR00083 Histidinol dehydrogenase signature 238 257 4.5E-73 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 PRINTS PR00083 Histidinol dehydrogenase signature 157 183 4.5E-73 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 PRINTS PR00083 Histidinol dehydrogenase signature 123 149 4.5E-73 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 26 413 5.3E-142 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 Gene3D G3DSA:3.40.50.1980 20 226 2.6E-76 T 23-04-2016 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 216 248 - T 23-04-2016 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 PANTHER PTHR21256 19 416 1.3E-159 T 23-04-2016 SHYC_RS01640 781b8084d54421c15169258db41f51e0 416 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 3 414 35.632 T 23-04-2016 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23|UniPathway: UPA00031 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 565 40.014 T 23-04-2016 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 SUPERFAMILY SSF52954 460 567 4.09E-28 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 PANTHER PTHR11451 396 568 3.8E-150 T 23-04-2016 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 PANTHER PTHR11451 4 244 3.8E-150 T 23-04-2016 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 Pfam PF03129 Anticodon binding domain 474 562 1.1E-17 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.8E-19 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.8E-19 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.8E-19 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.8E-19 T 23-04-2016 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 Gene3D G3DSA:3.40.50.800 465 567 1.1E-28 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 Pfam PF04073 Aminoacyl-tRNA editing domain 258 376 4.5E-26 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 PANTHER PTHR11451:SF3 396 568 3.8E-150 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 PANTHER PTHR11451:SF3 4 244 3.8E-150 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 Gene3D G3DSA:3.30.930.10 404 464 3.6E-100 T 23-04-2016 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 Gene3D G3DSA:3.30.930.10 1 228 3.6E-100 T 23-04-2016 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 561 3.2E-229 T 23-04-2016 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 SUPERFAMILY SSF55826 218 385 8.5E-31 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 Gene3D G3DSA:3.90.960.10 256 376 1.4E-27 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 456 1.5E-53 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 SUPERFAMILY SSF55681 9 237 2.11E-102 T 23-04-2016 SHYC_RS07860 85b6ab540931eefd4e3533501a113348 568 SUPERFAMILY SSF55681 404 475 2.11E-102 T 23-04-2016 SHYC_RS07530 cfe5a51fe854d2e2d2d023fc6fd15add 354 Gene3D G3DSA:3.40.50.1100 60 144 7.0E-43 T 23-04-2016 SHYC_RS07530 cfe5a51fe854d2e2d2d023fc6fd15add 354 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 318 1.2E-80 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS07530 cfe5a51fe854d2e2d2d023fc6fd15add 354 TIGRFAM TIGR00260 thrC: threonine synthase 8 325 1.1E-105 T 23-04-2016 IPR004450 Threonine synthase-like SHYC_RS07530 cfe5a51fe854d2e2d2d023fc6fd15add 354 PIRSF PIRSF038945 1 350 7.5E-162 T 23-04-2016 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1|UniPathway: UPA00050 SHYC_RS07530 cfe5a51fe854d2e2d2d023fc6fd15add 354 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 52 65 - T 23-04-2016 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 SHYC_RS07530 cfe5a51fe854d2e2d2d023fc6fd15add 354 SUPERFAMILY SSF53686 4 353 1.96E-107 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS07530 cfe5a51fe854d2e2d2d023fc6fd15add 354 PANTHER PTHR10314:SF5 2 354 5.7E-152 T 23-04-2016 SHYC_RS07530 cfe5a51fe854d2e2d2d023fc6fd15add 354 Gene3D G3DSA:3.40.50.1100 145 334 1.4E-52 T 23-04-2016 SHYC_RS07530 cfe5a51fe854d2e2d2d023fc6fd15add 354 PANTHER PTHR10314 2 354 5.7E-152 T 23-04-2016 SHYC_RS10300 6e3854820c27db3dcba48d476fa546a9 100 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 35 87 2.2E-13 T 23-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 SHYC_RS10300 6e3854820c27db3dcba48d476fa546a9 100 PANTHER PTHR34702 1 100 4.8E-24 T 23-04-2016 SHYC_RS10300 6e3854820c27db3dcba48d476fa546a9 100 PIRSF PIRSF028784 2 96 1.8E-28 T 23-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 SHYC_RS10300 6e3854820c27db3dcba48d476fa546a9 100 PANTHER PTHR34702:SF1 1 100 4.8E-24 T 23-04-2016 SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 PANTHER PTHR33154:SF3 3 98 2.5E-33 T 23-04-2016 SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 SMART SM00418 8 85 1.1E-22 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 4.8E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 4.8E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 4.8E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 40 4.8E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 PANTHER PTHR33154 3 98 2.5E-33 T 23-04-2016 SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 1.5E-15 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 31 49 - T 23-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 Gene3D G3DSA:1.10.10.10 1 87 3.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00195 4049122222f9e79e076f835029e9b983 106 SUPERFAMILY SSF46785 2 84 3.96E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03630 3b97ae9ea96939a745f973a39aaa0c67 413 Pfam PF00464 Serine hydroxymethyltransferase 6 381 7.1E-178 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SHYC_RS03630 3b97ae9ea96939a745f973a39aaa0c67 413 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 412 53.38 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SHYC_RS03630 3b97ae9ea96939a745f973a39aaa0c67 413 PANTHER PTHR11680 7 411 2.6E-251 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SHYC_RS03630 3b97ae9ea96939a745f973a39aaa0c67 413 Gene3D G3DSA:3.40.640.10 33 278 4.4E-108 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS03630 3b97ae9ea96939a745f973a39aaa0c67 413 SUPERFAMILY SSF53383 2 412 2.28E-180 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS03630 3b97ae9ea96939a745f973a39aaa0c67 413 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 23-04-2016 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0004372|GO:0006544|GO:0006563|GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SHYC_RS03630 3b97ae9ea96939a745f973a39aaa0c67 413 Gene3D G3DSA:3.90.1150.10 279 412 4.8E-58 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS03630 3b97ae9ea96939a745f973a39aaa0c67 413 PIRSF PIRSF000412 1 412 5.5E-168 T 23-04-2016 IPR001085 Serine hydroxymethyltransferase GO:0016740 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|UniPathway: UPA00193|UniPathway: UPA00288 SHYC_RS06450 553059b3aa58bfc26153858634e98e70 309 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 308 8.2E-105 T 23-04-2016 SHYC_RS06450 553059b3aa58bfc26153858634e98e70 309 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 308 34.168 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SHYC_RS06450 553059b3aa58bfc26153858634e98e70 309 Gene3D G3DSA:3.40.50.150 111 303 2.5E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS06450 553059b3aa58bfc26153858634e98e70 309 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 302 1.5E-79 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SHYC_RS06450 553059b3aa58bfc26153858634e98e70 309 PANTHER PTHR18895:SF3 33 309 4.8E-85 T 23-04-2016 SHYC_RS06450 553059b3aa58bfc26153858634e98e70 309 PANTHER PTHR18895 33 309 4.8E-85 T 23-04-2016 SHYC_RS06450 553059b3aa58bfc26153858634e98e70 309 SUPERFAMILY SSF53335 91 308 1.33E-45 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS06450 553059b3aa58bfc26153858634e98e70 309 PIRSF PIRSF000401 1 309 2.7E-108 T 23-04-2016 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 SHYC_RS11545 07830f7cb3cad9a5ad456f8434af3195 189 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 189 3.8E-97 T 23-04-2016 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SHYC_RS11545 07830f7cb3cad9a5ad456f8434af3195 189 SUPERFAMILY SSF52833 1 188 1.16E-52 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS11545 07830f7cb3cad9a5ad456f8434af3195 189 PANTHER PTHR10681 1 189 7.5E-89 T 23-04-2016 SHYC_RS11545 07830f7cb3cad9a5ad456f8434af3195 189 PANTHER PTHR10681:SF121 1 189 7.5E-89 T 23-04-2016 SHYC_RS11545 07830f7cb3cad9a5ad456f8434af3195 189 Pfam PF00578 AhpC/TSA family 4 135 1.9E-33 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SHYC_RS11545 07830f7cb3cad9a5ad456f8434af3195 189 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 158 180 1.6E-4 T 23-04-2016 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 SHYC_RS11545 07830f7cb3cad9a5ad456f8434af3195 189 PIRSF PIRSF000239 1 189 2.0E-49 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SHYC_RS11545 07830f7cb3cad9a5ad456f8434af3195 189 Gene3D G3DSA:3.40.30.10 3 184 2.2E-57 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 23-04-2016 IPR017937 Thioredoxin, conserved site GO:0045454 SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 SUPERFAMILY SSF52833 3 104 1.31E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 3.7E-39 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 Gene3D G3DSA:3.40.30.10 3 103 8.8E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 PANTHER PTHR10438:SF215 1 104 4.0E-39 T 23-04-2016 SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 PIRSF PIRSF000077 1 104 6.4E-43 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 PANTHER PTHR10438 1 104 4.0E-39 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 Pfam PF00085 Thioredoxin 4 103 9.4E-33 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 PRINTS PR00421 Thioredoxin family signature 28 37 2.5E-8 T 23-04-2016 SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 PRINTS PR00421 Thioredoxin family signature 20 28 2.5E-8 T 23-04-2016 SHYC_RS08400 143d145ff06361a1deee11f5703282a8 104 PRINTS PR00421 Thioredoxin family signature 68 79 2.5E-8 T 23-04-2016 SHYC_RS10615 b2512c34080ae7eace919b764ed13a55 319 SUPERFAMILY SSF51735 1 314 9.34E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS10615 b2512c34080ae7eace919b764ed13a55 319 Gene3D G3DSA:3.40.50.720 1 208 2.2E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS10615 b2512c34080ae7eace919b764ed13a55 319 PANTHER PTHR10366:SF12 3 319 1.2E-109 T 23-04-2016 SHYC_RS10615 b2512c34080ae7eace919b764ed13a55 319 Gene3D G3DSA:3.90.25.10 209 315 5.4E-5 T 23-04-2016 SHYC_RS10615 b2512c34080ae7eace919b764ed13a55 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 240 9.5E-25 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SHYC_RS10615 b2512c34080ae7eace919b764ed13a55 319 PANTHER PTHR10366 3 319 1.2E-109 T 23-04-2016 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 Gene3D G3DSA:2.30.40.10 1 67 3.9E-21 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 Pfam PF01979 Amidohydrolase family 49 418 7.6E-46 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 Hamap MF_00220_B Dihydroorotase [pyrC]. 1 423 46.37 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 ProSitePatterns PS00482 Dihydroorotase signature 1. 56 64 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 PANTHER PTHR11647:SF70 1 424 3.8E-198 T 23-04-2016 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 ProSitePatterns PS00483 Dihydroorotase signature 2. 301 312 - T 23-04-2016 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 PANTHER PTHR11647 1 424 3.8E-198 T 23-04-2016 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 16 422 2.1E-140 T 23-04-2016 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 SUPERFAMILY SSF51338 2 52 2.51E-23 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 SUPERFAMILY SSF51338 365 423 2.51E-23 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 Gene3D G3DSA:3.20.20.140 68 404 7.6E-116 T 23-04-2016 SHYC_RS08200 7e8eea617e4710e0a615de2a9b8fa52a 424 SUPERFAMILY SSF51556 53 367 4.9E-113 T 23-04-2016 IPR032466 Metal-dependent hydrolase SHYC_RS02915 e6d02eac8fc9fee93ed03bc988c2fd1b 175 Pfam PF02632 BioY family 18 160 5.3E-32 T 23-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SHYC_RS02915 e6d02eac8fc9fee93ed03bc988c2fd1b 175 PIRSF PIRSF016661 1 168 1.2E-35 T 23-04-2016 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 SHYC_RS02915 e6d02eac8fc9fee93ed03bc988c2fd1b 175 PANTHER PTHR34295 1 162 6.7E-57 T 23-04-2016 SHYC_RS02915 e6d02eac8fc9fee93ed03bc988c2fd1b 175 PANTHER PTHR34295:SF2 1 162 6.7E-57 T 23-04-2016 SHYC_RS10370 b960e6e43b76f76fb79402ed7a11aa7c 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 204 218 1.1E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SHYC_RS10370 b960e6e43b76f76fb79402ed7a11aa7c 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 1.1E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SHYC_RS10370 b960e6e43b76f76fb79402ed7a11aa7c 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 1.1E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SHYC_RS10370 b960e6e43b76f76fb79402ed7a11aa7c 266 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.1E-10 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SHYC_RS10370 b960e6e43b76f76fb79402ed7a11aa7c 266 PANTHER PTHR10992 1 259 8.0E-48 T 23-04-2016 SHYC_RS10370 b960e6e43b76f76fb79402ed7a11aa7c 266 Pfam PF00561 alpha/beta hydrolase fold 22 244 1.7E-17 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SHYC_RS10370 b960e6e43b76f76fb79402ed7a11aa7c 266 PANTHER PTHR10992:SF880 1 259 8.0E-48 T 23-04-2016 SHYC_RS10370 b960e6e43b76f76fb79402ed7a11aa7c 266 SUPERFAMILY SSF53474 4 256 2.09E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS10370 b960e6e43b76f76fb79402ed7a11aa7c 266 Gene3D G3DSA:3.40.50.1820 6 259 7.2E-45 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PIRSF PIRSF000724 1 396 3.6E-144 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 Gene3D G3DSA:3.40.50.1270 184 383 1.8E-81 T 23-04-2016 IPR015901 Phosphoglycerate kinase, C-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PANTHER PTHR11406 1 393 1.6E-203 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 Gene3D G3DSA:3.40.50.1260 4 183 4.7E-71 T 23-04-2016 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 Pfam PF00162 Phosphoglycerate kinase 6 385 6.2E-153 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 23-04-2016 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 SUPERFAMILY SSF53748 3 395 2.47E-150 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PRINTS PR00477 Phosphoglycerate kinase family signature 172 194 2.4E-92 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 2.4E-92 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PRINTS PR00477 Phosphoglycerate kinase family signature 348 359 2.4E-92 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PRINTS PR00477 Phosphoglycerate kinase family signature 142 164 2.4E-92 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PRINTS PR00477 Phosphoglycerate kinase family signature 195 214 2.4E-92 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 2.4E-92 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PRINTS PR00477 Phosphoglycerate kinase family signature 314 339 2.4E-92 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PRINTS PR00477 Phosphoglycerate kinase family signature 371 388 2.4E-92 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 PRINTS PR00477 Phosphoglycerate kinase family signature 110 125 2.4E-92 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS09570 8224d03b95ccee972a03be6164301fec 396 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 395 40.895 T 23-04-2016 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|UniPathway: UPA00109 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 421 9.1E-46 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 Hamap MF_00303 Trigger factor [tig]. 1 427 23.714 T 23-04-2016 IPR005215 Trigger factor GO:0015031 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 Gene3D G3DSA:3.10.50.40 151 217 8.8E-12 T 23-04-2016 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 Gene3D G3DSA:3.30.70.1050 1 119 2.0E-40 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 Gene3D G3DSA:1.10.3120.10 218 399 3.9E-59 T 23-04-2016 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 SUPERFAMILY SSF109998 250 429 3.04E-40 T 23-04-2016 IPR027304 Trigger factor/SurA domain SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 PANTHER PTHR30560 1 437 2.3E-136 T 23-04-2016 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 PIRSF PIRSF003095 1 437 5.7E-132 T 23-04-2016 IPR005215 Trigger factor GO:0015031 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 SUPERFAMILY SSF54534 88 243 1.0E-34 T 23-04-2016 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 SUPERFAMILY SSF102735 1 130 3.92E-42 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 230 2.1E-14 T 23-04-2016 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain GO:0006457 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.0E-47 T 23-04-2016 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 TIGRFAM TIGR00115 tig: trigger factor 14 421 1.5E-139 T 23-04-2016 IPR005215 Trigger factor GO:0015031 SHYC_RS06045 f9145debfa34194a6c5a7ab4dfa5dd9a 437 PANTHER PTHR30560:SF3 1 437 2.3E-136 T 23-04-2016 SHYC_RS08650 362cd0034629e8b8ed7d389d144327c7 219 Pfam PF02254 TrkA-N domain 5 120 1.4E-29 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHYC_RS08650 362cd0034629e8b8ed7d389d144327c7 219 Gene3D G3DSA:3.40.50.720 2 139 6.8E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08650 362cd0034629e8b8ed7d389d144327c7 219 Gene3D G3DSA:3.30.70.1450 146 217 1.2E-19 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHYC_RS08650 362cd0034629e8b8ed7d389d144327c7 219 Pfam PF02080 TrkA-C domain 150 216 5.6E-15 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHYC_RS08650 362cd0034629e8b8ed7d389d144327c7 219 SUPERFAMILY SSF51735 4 134 1.13E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08650 362cd0034629e8b8ed7d389d144327c7 219 SUPERFAMILY SSF116726 132 215 7.19E-22 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHYC_RS08650 362cd0034629e8b8ed7d389d144327c7 219 PANTHER PTHR16254 1 159 4.3E-55 T 23-04-2016 SHYC_RS11180 5a395caa34f1a410914360af23a41037 298 PANTHER PTHR10314 1 298 3.5E-101 T 23-04-2016 SHYC_RS11180 5a395caa34f1a410914360af23a41037 298 PANTHER PTHR10314:SF8 1 298 3.5E-101 T 23-04-2016 SHYC_RS11180 5a395caa34f1a410914360af23a41037 298 Gene3D G3DSA:3.40.50.1100 35 135 2.0E-32 T 23-04-2016 SHYC_RS11180 5a395caa34f1a410914360af23a41037 298 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 3 279 6.6E-59 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS11180 5a395caa34f1a410914360af23a41037 298 Gene3D G3DSA:3.40.50.1100 141 291 4.1E-60 T 23-04-2016 SHYC_RS11180 5a395caa34f1a410914360af23a41037 298 Gene3D G3DSA:3.40.50.1100 2 34 4.1E-60 T 23-04-2016 SHYC_RS11180 5a395caa34f1a410914360af23a41037 298 SUPERFAMILY SSF53686 2 291 1.31E-81 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS10585 83f6b59553472402bd93c8b646bf0daf 165 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SHYC_RS10585 83f6b59553472402bd93c8b646bf0daf 165 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 8 149 43.165 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SHYC_RS10585 83f6b59553472402bd93c8b646bf0daf 165 PANTHER PTHR11079 1 152 8.3E-47 T 23-04-2016 SHYC_RS10585 83f6b59553472402bd93c8b646bf0daf 165 Pfam PF14437 MafB19-like deaminase 3 149 5.2E-40 T 23-04-2016 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 SHYC_RS10585 83f6b59553472402bd93c8b646bf0daf 165 Gene3D G3DSA:3.40.140.10 2 147 2.1E-57 T 23-04-2016 SHYC_RS10585 83f6b59553472402bd93c8b646bf0daf 165 SUPERFAMILY SSF53927 3 153 4.35E-53 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHYC_RS04110 9008c976cfc68594f6e6b810e8228d03 346 SUPERFAMILY SSF56235 107 328 1.0E-14 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHYC_RS04110 9008c976cfc68594f6e6b810e8228d03 346 Gene3D G3DSA:3.60.60.10 116 333 9.2E-20 T 23-04-2016 IPR003199 Choloylglycine hydrolase/Peptidase C59 family GO:0016811 SHYC_RS04110 9008c976cfc68594f6e6b810e8228d03 346 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 106 312 2.7E-64 T 23-04-2016 IPR005079 Peptidase C45 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 400 6.3E-31 T 23-04-2016 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 Gene3D G3DSA:3.30.930.10 106 421 4.6E-137 T 23-04-2016 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 1.4E-31 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 1.4E-33 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 1.4E-33 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 1.4E-33 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 1.4E-33 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 1.4E-33 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 PANTHER PTHR11778 1 423 1.6E-210 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 PIRSF PIRSF001529 1 425 6.0E-193 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 42.382 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 SUPERFAMILY SSF46589 1 113 2.35E-30 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 SUPERFAMILY SSF55681 117 423 1.66E-99 T 23-04-2016 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 Gene3D G3DSA:1.10.287.40 1 105 6.4E-27 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SHYC_RS00050 ac908e9d3d2235c9821734df3fcc84a9 426 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 1.4E-172 T 23-04-2016 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: REACT_71|UniPathway: UPA00906 SHYC_RS00605 51e6c722c56fa7deb7903b0921ed8515 648 PANTHER PTHR33308 348 646 1.3E-36 T 23-04-2016 SHYC_RS00605 51e6c722c56fa7deb7903b0921ed8515 648 PANTHER PTHR33308:SF3 348 646 1.3E-36 T 23-04-2016 SHYC_RS00605 51e6c722c56fa7deb7903b0921ed8515 648 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 362 500 3.1E-19 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHYC_RS00605 51e6c722c56fa7deb7903b0921ed8515 648 SUPERFAMILY SSF54001 531 645 4.61E-17 T 23-04-2016 SHYC_RS00605 51e6c722c56fa7deb7903b0921ed8515 648 SMART SM00047 345 504 6.1E-43 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHYC_RS00605 51e6c722c56fa7deb7903b0921ed8515 648 Pfam PF05257 CHAP domain 536 622 7.7E-16 T 23-04-2016 IPR007921 CHAP domain SHYC_RS06020 dbbce3baf8a21e77a7077fe027e268a3 191 Gene3D G3DSA:3.10.20.80 22 98 5.6E-33 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SHYC_RS06020 dbbce3baf8a21e77a7077fe027e268a3 191 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 27 189 1.9E-70 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SHYC_RS06020 dbbce3baf8a21e77a7077fe027e268a3 191 Gene3D G3DSA:3.30.110.10 99 190 1.8E-39 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SHYC_RS06020 dbbce3baf8a21e77a7077fe027e268a3 191 ProSitePatterns PS00938 Initiation factor 3 signature. 78 91 - T 23-04-2016 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 SHYC_RS06020 dbbce3baf8a21e77a7077fe027e268a3 191 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 20 190 30.478 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SHYC_RS06020 dbbce3baf8a21e77a7077fe027e268a3 191 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 27 95 5.8E-29 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SHYC_RS06020 dbbce3baf8a21e77a7077fe027e268a3 191 SUPERFAMILY SSF54364 25 98 2.09E-27 T 23-04-2016 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 SHYC_RS06020 dbbce3baf8a21e77a7077fe027e268a3 191 SUPERFAMILY SSF55200 102 190 1.1E-33 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SHYC_RS06020 dbbce3baf8a21e77a7077fe027e268a3 191 PANTHER PTHR10938 20 191 4.6E-67 T 23-04-2016 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 SHYC_RS06020 dbbce3baf8a21e77a7077fe027e268a3 191 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 103 187 7.3E-40 T 23-04-2016 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 SHYC_RS07535 06578a27b3fe07ec559c91850500d7a8 427 PANTHER PTHR21499 1 317 3.6E-127 T 23-04-2016 SHYC_RS07535 06578a27b3fe07ec559c91850500d7a8 427 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 8.0E-20 T 23-04-2016 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 SHYC_RS07535 06578a27b3fe07ec559c91850500d7a8 427 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 23-04-2016 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SHYC_RS07535 06578a27b3fe07ec559c91850500d7a8 427 Pfam PF00742 Homoserine dehydrogenase 137 315 2.2E-62 T 23-04-2016 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3|UniPathway: UPA00050|UniPathway: UPA00051 SHYC_RS07535 06578a27b3fe07ec559c91850500d7a8 427 SUPERFAMILY SSF55347 137 302 7.19E-51 T 23-04-2016 SHYC_RS07535 06578a27b3fe07ec559c91850500d7a8 427 SUPERFAMILY SSF51735 1 158 1.47E-34 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07535 06578a27b3fe07ec559c91850500d7a8 427 PANTHER PTHR21499:SF2 1 317 3.6E-127 T 23-04-2016 SHYC_RS07535 06578a27b3fe07ec559c91850500d7a8 427 Gene3D G3DSA:3.40.50.720 1 148 1.7E-50 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07535 06578a27b3fe07ec559c91850500d7a8 427 Gene3D G3DSA:3.30.360.10 149 299 2.6E-53 T 23-04-2016 SHYC_RS07760 41b62c3c04b8fba8c25ea3d315fafa8f 290 SUPERFAMILY SSF55021 9 74 2.59E-5 T 23-04-2016 SHYC_RS07760 41b62c3c04b8fba8c25ea3d315fafa8f 290 PIRSF PIRSF021288 5 276 2.6E-134 T 23-04-2016 IPR016784 Uncharacterised protein UCP021288 with ACT domain SHYC_RS07760 41b62c3c04b8fba8c25ea3d315fafa8f 290 Pfam PF11868 Protein of unknown function (DUF3388) 78 263 1.1E-93 T 23-04-2016 IPR024514 Domain of unknown function DUF3388 SHYC_RS09970 cb5d48082210f86d51e655cc3b30d7c1 775 SUPERFAMILY SSF53756 6 333 1.03E-17 T 23-04-2016 SHYC_RS09970 cb5d48082210f86d51e655cc3b30d7c1 775 SUPERFAMILY SSF53756 437 741 2.96E-11 T 23-04-2016 SHYC_RS09970 cb5d48082210f86d51e655cc3b30d7c1 775 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 414 740 1.7E-61 T 23-04-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 SHYC_RS09970 cb5d48082210f86d51e655cc3b30d7c1 775 PANTHER PTHR37316:SF1 419 736 1.4E-20 T 23-04-2016 SHYC_RS09970 cb5d48082210f86d51e655cc3b30d7c1 775 PANTHER PTHR37316 419 736 1.4E-20 T 23-04-2016 SHYC_RS11850 57c6fa8208afd71818467f9e2e60f529 222 SUPERFAMILY SSF56349 2 205 4.12E-29 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHYC_RS11850 57c6fa8208afd71818467f9e2e60f529 222 Pfam PF00589 Phage integrase family 97 201 5.2E-8 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS11850 57c6fa8208afd71818467f9e2e60f529 222 Gene3D G3DSA:1.10.443.10 93 204 1.7E-12 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS11850 57c6fa8208afd71818467f9e2e60f529 222 Gene3D G3DSA:1.10.150.130 1 73 1.8E-13 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 SUPERFAMILY SSF53597 143 345 8.18E-45 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 6 341 2.0E-91 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 Gene3D G3DSA:3.40.140.10 3 139 3.7E-29 T 23-04-2016 SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 Gene3D G3DSA:3.40.430.10 143 347 1.0E-51 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 PIRSF PIRSF006769 1 348 9.9E-94 T 23-04-2016 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525|UniPathway: UPA00275|UniPathway: UPA00275 SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 Pfam PF01872 RibD C-terminal domain 143 326 4.4E-38 T 23-04-2016 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 PANTHER PTHR11079 2 215 6.8E-40 T 23-04-2016 SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 PANTHER PTHR11079:SF10 2 215 6.8E-40 T 23-04-2016 SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 SUPERFAMILY SSF53927 3 140 6.2E-36 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 48 87 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SHYC_RS05590 1f0795e449c02c9d3474a903a4ded36a 348 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 98 3.7E-20 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SHYC_RS08910 2fb86dc7671c8c0be945004e2c2131d8 312 PIRSF PIRSF005355 3 308 1.2E-79 T 23-04-2016 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 SHYC_RS08910 2fb86dc7671c8c0be945004e2c2131d8 312 PANTHER PTHR13929 6 311 4.9E-101 T 23-04-2016 SHYC_RS08910 2fb86dc7671c8c0be945004e2c2131d8 312 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 10 303 18.541 T 23-04-2016 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SHYC_RS08910 2fb86dc7671c8c0be945004e2c2131d8 312 PANTHER PTHR13929:SF0 6 311 4.9E-101 T 23-04-2016 SHYC_RS08910 2fb86dc7671c8c0be945004e2c2131d8 312 Pfam PF01040 UbiA prenyltransferase family 29 279 1.2E-37 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SHYC_RS01740 6846dc6116d70121639be2193ae79097 582 PANTHER PTHR30294 371 578 7.9E-65 T 23-04-2016 SHYC_RS01740 6846dc6116d70121639be2193ae79097 582 PANTHER PTHR30294 1 237 7.9E-65 T 23-04-2016 SHYC_RS01740 6846dc6116d70121639be2193ae79097 582 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 357 560 1.1E-33 T 23-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal SHYC_RS01740 6846dc6116d70121639be2193ae79097 582 PANTHER PTHR30294:SF4 371 578 7.9E-65 T 23-04-2016 SHYC_RS01740 6846dc6116d70121639be2193ae79097 582 PANTHER PTHR30294:SF4 1 237 7.9E-65 T 23-04-2016 SHYC_RS01740 6846dc6116d70121639be2193ae79097 582 Pfam PF12698 ABC-2 family transporter protein 26 555 1.8E-15 T 23-04-2016 SHYC_RS01740 6846dc6116d70121639be2193ae79097 582 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 170 5.2E-34 T 23-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 SMART SM00740 656 712 0.63 T 23-04-2016 IPR005543 PASTA domain SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 SMART SM00740 595 655 2.1E-8 T 23-04-2016 IPR005543 PASTA domain SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 Pfam PF03793 PASTA domain 658 710 7.8E-6 T 23-04-2016 IPR005543 PASTA domain SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 Pfam PF03793 PASTA domain 600 650 4.6E-7 T 23-04-2016 IPR005543 PASTA domain SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 PANTHER PTHR30627 1 618 1.5E-204 T 23-04-2016 SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 SUPERFAMILY SSF56519 61 242 6.8E-44 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 Pfam PF00905 Penicillin binding protein transpeptidase domain 269 568 7.3E-78 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 SUPERFAMILY SSF54184 600 654 5.76E-15 T 23-04-2016 SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 Gene3D G3DSA:3.90.1310.10 145 249 2.0E-31 T 23-04-2016 SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 PANTHER PTHR30627:SF1 1 618 1.5E-204 T 23-04-2016 SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 225 2.8E-23 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 Gene3D G3DSA:3.40.710.10 250 585 2.1E-79 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 SUPERFAMILY SSF54184 657 711 1.02E-11 T 23-04-2016 SHYC_RS08295 5ea536b110560241a7a9a334450d0578 713 SUPERFAMILY SSF56601 195 606 5.45E-80 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SHYC_RS03280 38b9b343f65b7ba2b0396f9932c68404 104 Gene3D G3DSA:1.20.58.80 2 102 4.7E-37 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS03280 38b9b343f65b7ba2b0396f9932c68404 104 PANTHER PTHR34382:SF3 1 103 1.2E-68 T 23-04-2016 SHYC_RS03280 38b9b343f65b7ba2b0396f9932c68404 104 PANTHER PTHR34382 1 103 1.2E-68 T 23-04-2016 SHYC_RS03280 38b9b343f65b7ba2b0396f9932c68404 104 PIRSF PIRSF000699 1 104 3.6E-39 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS03280 38b9b343f65b7ba2b0396f9932c68404 104 SUPERFAMILY SSF46973 1 102 1.18E-34 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS03280 38b9b343f65b7ba2b0396f9932c68404 104 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 101 1.1E-34 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS03280 38b9b343f65b7ba2b0396f9932c68404 104 TIGRFAM TIGR00823 EIIA-LAC: PTS system, lactose-specific IIa component 4 102 2.7E-46 T 23-04-2016 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS05050 0f1d7b0883cc83d9f4dd40468a10adb5 229 PRINTS PR00839 V8 serine protease family signature 53 70 9.8E-12 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05050 0f1d7b0883cc83d9f4dd40468a10adb5 229 PRINTS PR00839 V8 serine protease family signature 142 155 9.8E-12 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05050 0f1d7b0883cc83d9f4dd40468a10adb5 229 PRINTS PR00839 V8 serine protease family signature 176 192 9.8E-12 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05050 0f1d7b0883cc83d9f4dd40468a10adb5 229 PRINTS PR00839 V8 serine protease family signature 194 206 9.8E-12 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05050 0f1d7b0883cc83d9f4dd40468a10adb5 229 Pfam PF00089 Trypsin 48 206 1.5E-12 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 SHYC_RS05050 0f1d7b0883cc83d9f4dd40468a10adb5 229 ProSitePatterns PS00673 Serine proteases, V8 family, serine active site. 182 192 - T 23-04-2016 IPR000126 Serine proteases, V8 family, serine active site GO:0006508|GO:0008236 SHYC_RS05050 0f1d7b0883cc83d9f4dd40468a10adb5 229 SUPERFAMILY SSF50494 6 221 6.71E-24 T 23-04-2016 IPR009003 Peptidase S1, PA clan SHYC_RS05050 0f1d7b0883cc83d9f4dd40468a10adb5 229 Gene3D G3DSA:2.40.10.10 142 207 4.5E-13 T 23-04-2016 SHYC_RS05050 0f1d7b0883cc83d9f4dd40468a10adb5 229 Gene3D G3DSA:2.40.10.10 47 117 3.7E-10 T 23-04-2016 SHYC_RS02420 8aeee4fe37c246f037877844eea96130 386 Pfam PF07690 Major Facilitator Superfamily 16 342 3.0E-43 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS02420 8aeee4fe37c246f037877844eea96130 386 PANTHER PTHR23515 10 376 6.6E-99 T 23-04-2016 SHYC_RS02420 8aeee4fe37c246f037877844eea96130 386 Gene3D G3DSA:1.20.1250.20 12 188 2.6E-22 T 23-04-2016 SHYC_RS02420 8aeee4fe37c246f037877844eea96130 386 SUPERFAMILY SSF103473 10 384 7.06E-58 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS02420 8aeee4fe37c246f037877844eea96130 386 Gene3D G3DSA:1.20.1250.20 197 380 1.2E-20 T 23-04-2016 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 PANTHER PTHR21499:SF3 3 442 2.3E-131 T 23-04-2016 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 SUPERFAMILY SSF53633 1 290 3.4E-66 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 Pfam PF00696 Amino acid kinase family 2 276 5.5E-43 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 446 1.4E-89 T 23-04-2016 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 PIRSF PIRSF000726 1 449 3.2E-82 T 23-04-2016 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 SUPERFAMILY SSF55021 373 447 1.64E-20 T 23-04-2016 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 23-04-2016 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 SUPERFAMILY SSF55021 297 369 1.4E-12 T 23-04-2016 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 PANTHER PTHR21499 3 442 2.3E-131 T 23-04-2016 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 Pfam PF01842 ACT domain 398 430 1.5E-7 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 Gene3D G3DSA:3.40.1160.10 104 292 3.0E-49 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SHYC_RS07540 83e80dd48b94fde7c9f3542cc0cb0b56 449 Gene3D G3DSA:3.40.1160.10 1 47 3.0E-49 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SHYC_RS03920 99512afdb78ec4dcf71d72048bd25943 157 PANTHER PTHR30239 1 152 2.5E-25 T 23-04-2016 SHYC_RS03920 99512afdb78ec4dcf71d72048bd25943 157 Gene3D G3DSA:3.30.70.260 1 79 3.6E-19 T 23-04-2016 SHYC_RS03920 99512afdb78ec4dcf71d72048bd25943 157 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 155 5.1E-24 T 23-04-2016 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03920 99512afdb78ec4dcf71d72048bd25943 157 Pfam PF01842 ACT domain 8 68 1.2E-11 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SHYC_RS03920 99512afdb78ec4dcf71d72048bd25943 157 PANTHER PTHR30239:SF0 1 152 2.5E-25 T 23-04-2016 SHYC_RS03920 99512afdb78ec4dcf71d72048bd25943 157 SUPERFAMILY SSF55021 77 156 2.44E-9 T 23-04-2016 SHYC_RS03920 99512afdb78ec4dcf71d72048bd25943 157 Gene3D G3DSA:3.30.70.1150 85 156 4.7E-7 T 23-04-2016 SHYC_RS03920 99512afdb78ec4dcf71d72048bd25943 157 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 2.0E-19 T 23-04-2016 SHYC_RS03920 99512afdb78ec4dcf71d72048bd25943 157 SUPERFAMILY SSF55021 3 79 1.01E-13 T 23-04-2016 SHYC_RS03920 99512afdb78ec4dcf71d72048bd25943 157 Pfam PF10369 Small subunit of acetolactate synthase 85 156 1.2E-8 T 23-04-2016 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 Gene3D G3DSA:3.40.1260.10 201 359 1.2E-54 T 23-04-2016 IPR027396 DsrEFH-like SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 Pfam PF13686 DsrE/DsrF/DrsH-like family 207 358 4.8E-55 T 23-04-2016 IPR032836 DsrE/DsrF/DrsH-like family SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 Pfam PF01206 Sulfurtransferase TusA 126 192 1.7E-17 T 23-04-2016 IPR001455 TusA-like domain SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 SUPERFAMILY SSF64307 126 192 2.88E-17 T 23-04-2016 IPR001455 TusA-like domain SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 SUPERFAMILY SSF75169 301 353 2.35E-18 T 23-04-2016 IPR027396 DsrEFH-like SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 SUPERFAMILY SSF75169 207 252 2.35E-18 T 23-04-2016 IPR027396 DsrEFH-like SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 PANTHER PTHR34655:SF2 200 359 3.2E-50 T 23-04-2016 SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 Pfam PF00581 Rhodanese-like domain 17 98 1.9E-14 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 SUPERFAMILY SSF52821 14 106 1.57E-25 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 SMART SM00450 10 102 9.6E-19 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 PANTHER PTHR34655 200 359 3.2E-50 T 23-04-2016 SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 Gene3D G3DSA:3.30.110.40 126 192 4.2E-23 T 23-04-2016 IPR001455 TusA-like domain SHYC_RS01155 da1771844e56eb334f901a160c3f2805 359 Gene3D G3DSA:3.40.250.10 18 99 1.5E-24 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 Gene3D G3DSA:3.40.50.970 372 574 5.0E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 PANTHER PTHR18968 8 580 9.3E-276 T 23-04-2016 SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 448 467 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 SUPERFAMILY SSF52518 389 581 2.86E-67 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 29 188 5.5E-57 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 29 580 9.1E-224 T 23-04-2016 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111|UniPathway: UPA00047|UniPathway: UPA00049 SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 217 352 5.6E-43 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 411 559 2.5E-50 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 Gene3D G3DSA:3.40.50.1220 212 371 4.8E-59 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 Gene3D G3DSA:3.40.50.970 27 199 2.7E-72 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 SUPERFAMILY SSF52518 26 199 5.47E-60 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 SUPERFAMILY SSF52467 212 377 1.21E-57 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SHYC_RS03925 84baa43a47cdf4b4d49a63916d275b9c 584 PANTHER PTHR18968:SF116 8 580 9.3E-276 T 23-04-2016 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 PRINTS PR01774 Exfoliative toxin signature 151 173 9.8E-33 T 23-04-2016 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 PRINTS PR01774 Exfoliative toxin signature 217 241 9.8E-33 T 23-04-2016 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 PRINTS PR01774 Exfoliative toxin signature 72 93 9.8E-33 T 23-04-2016 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 PRINTS PR01774 Exfoliative toxin signature 175 193 9.8E-33 T 23-04-2016 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 PRINTS PR01774 Exfoliative toxin signature 132 149 9.8E-33 T 23-04-2016 IPR008353 Peptidase S1B, exfoliative toxin GO:0004252|GO:0006508 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 Pfam PF13365 Trypsin-like peptidase domain 88 240 1.1E-15 T 23-04-2016 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 SUPERFAMILY SSF50494 59 257 5.75E-39 T 23-04-2016 IPR009003 Peptidase S1, PA clan SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 Gene3D G3DSA:2.40.10.10 129 261 2.0E-43 T 23-04-2016 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 PRINTS PR00839 V8 serine protease family signature 62 79 6.5E-24 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 PRINTS PR00839 V8 serine protease family signature 232 244 6.5E-24 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 PRINTS PR00839 V8 serine protease family signature 183 196 6.5E-24 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 PRINTS PR00839 V8 serine protease family signature 88 105 6.5E-24 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05045 4bbca2c5875a7b04723d275fd8ce8e3b 273 PRINTS PR00839 V8 serine protease family signature 215 231 6.5E-24 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS00685 623089579482900a3fb3c05d6a87504f 132 Gene3D G3DSA:3.40.630.30 16 102 2.9E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS00685 623089579482900a3fb3c05d6a87504f 132 Pfam PF00583 Acetyltransferase (GNAT) family 20 92 1.3E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS00685 623089579482900a3fb3c05d6a87504f 132 PANTHER PTHR23091 14 99 8.9E-14 T 23-04-2016 SHYC_RS00685 623089579482900a3fb3c05d6a87504f 132 SUPERFAMILY SSF55729 15 99 3.24E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS00685 623089579482900a3fb3c05d6a87504f 132 PANTHER PTHR23091:SF225 14 99 8.9E-14 T 23-04-2016 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 262 376 4.8E-10 T 23-04-2016 IPR000014 PAS domain SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 SUPERFAMILY SSF55785 253 368 5.58E-12 T 23-04-2016 IPR000014 PAS domain SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 SMART SM00304 205 257 2.2E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 SUPERFAMILY SSF55874 432 601 1.44E-44 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 SMART SM00091 264 329 1.2E-6 T 23-04-2016 IPR000014 PAS domain SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 Pfam PF00672 HAMP domain 186 253 1.1E-17 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 Gene3D G3DSA:3.30.565.10 430 599 1.2E-48 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 SUPERFAMILY SSF158472 205 254 7.98E-10 T 23-04-2016 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 377 442 4.0E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 PANTHER PTHR24423:SF568 15 189 4.0E-233 T 23-04-2016 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 PANTHER PTHR24423:SF568 247 610 4.0E-233 T 23-04-2016 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 488 600 5.2E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 SUPERFAMILY SSF47384 361 442 4.12E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 579 3.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 526 540 3.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 585 598 3.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 554 3.3E-18 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 Pfam PF13426 PAS domain 275 369 4.9E-8 T 23-04-2016 IPR000014 PAS domain SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 Gene3D G3DSA:1.10.287.130 374 429 1.7E-20 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 PANTHER PTHR24423 15 189 4.0E-233 T 23-04-2016 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 PANTHER PTHR24423 247 610 4.0E-233 T 23-04-2016 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 SMART SM00388 376 443 2.3E-21 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 Gene3D G3DSA:3.30.450.20 264 373 9.9E-14 T 23-04-2016 SHYC_RS00175 b5a1e8a57c93a43bdbe8fcea4ce64fe4 610 SMART SM00387 487 601 3.9E-39 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS08090 627cb272514be3f928df7d0e8d2d6be7 216 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHYC_RS08090 627cb272514be3f928df7d0e8d2d6be7 216 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 200 2.3E-79 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHYC_RS08090 627cb272514be3f928df7d0e8d2d6be7 216 Gene3D G3DSA:3.20.20.70 2 213 8.3E-87 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS08090 627cb272514be3f928df7d0e8d2d6be7 216 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHYC_RS08090 627cb272514be3f928df7d0e8d2d6be7 216 PANTHER PTHR11749 1 213 2.8E-107 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHYC_RS08090 627cb272514be3f928df7d0e8d2d6be7 216 PIRSF PIRSF001461 1 215 1.4E-85 T 23-04-2016 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHYC_RS08090 627cb272514be3f928df7d0e8d2d6be7 216 SUPERFAMILY SSF51366 1 213 9.42E-72 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHYC_RS08090 627cb272514be3f928df7d0e8d2d6be7 216 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 213 1.5E-85 T 23-04-2016 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723 SHYC_RS05905 5d8a859db79a8fee6bdbea5ba3f092c9 230 SMART SM00849 7 195 2.8E-11 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS05905 5d8a859db79a8fee6bdbea5ba3f092c9 230 Gene3D G3DSA:3.60.15.10 1 229 1.6E-58 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS05905 5d8a859db79a8fee6bdbea5ba3f092c9 230 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 229 37.722 T 23-04-2016 IPR022877 Protein of unknown funcion UPF0173 SHYC_RS05905 5d8a859db79a8fee6bdbea5ba3f092c9 230 SUPERFAMILY SSF56281 1 229 1.07E-37 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS05905 5d8a859db79a8fee6bdbea5ba3f092c9 230 PANTHER PTHR15032:SF12 1 229 2.2E-59 T 23-04-2016 SHYC_RS05905 5d8a859db79a8fee6bdbea5ba3f092c9 230 PANTHER PTHR15032 1 229 2.2E-59 T 23-04-2016 SHYC_RS05905 5d8a859db79a8fee6bdbea5ba3f092c9 230 Pfam PF13483 Beta-lactamase superfamily domain 2 195 3.4E-22 T 23-04-2016 SHYC_RS04255 308e1baa90c22aa352c99658da106852 356 Pfam PF00817 impB/mucB/samB family 9 155 1.4E-51 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS04255 308e1baa90c22aa352c99658da106852 356 Gene3D G3DSA:3.30.1490.100 243 345 1.1E-30 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS04255 308e1baa90c22aa352c99658da106852 356 Gene3D G3DSA:1.10.150.20 169 237 4.4E-20 T 23-04-2016 SHYC_RS04255 308e1baa90c22aa352c99658da106852 356 SUPERFAMILY SSF100879 240 340 1.35E-27 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS04255 308e1baa90c22aa352c99658da106852 356 Hamap MF_01113 DNA polymerase IV [dinB]. 3 352 38.2 T 23-04-2016 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS04255 308e1baa90c22aa352c99658da106852 356 SUPERFAMILY SSF56672 3 236 9.78E-90 T 23-04-2016 SHYC_RS04255 308e1baa90c22aa352c99658da106852 356 Pfam PF11799 impB/mucB/samB family C-terminal domain 238 343 1.2E-19 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS04255 308e1baa90c22aa352c99658da106852 356 Gene3D G3DSA:3.30.70.270 68 166 5.6E-34 T 23-04-2016 SHYC_RS04255 308e1baa90c22aa352c99658da106852 356 PANTHER PTHR11076 3 356 2.5E-144 T 23-04-2016 SHYC_RS03170 b6822cdc23c0804223e8e7afea912939 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 1.0E-39 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SHYC_RS03170 b6822cdc23c0804223e8e7afea912939 72 SUPERFAMILY SSF50249 1 71 3.43E-29 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03170 b6822cdc23c0804223e8e7afea912939 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.376 T 23-04-2016 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 SHYC_RS03170 b6822cdc23c0804223e8e7afea912939 72 Gene3D G3DSA:2.40.50.140 1 72 1.6E-40 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03170 b6822cdc23c0804223e8e7afea912939 72 SMART SM00316 4 72 9.7E-7 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS03170 b6822cdc23c0804223e8e7afea912939 72 PANTHER PTHR33370 1 72 3.5E-50 T 23-04-2016 SHYC_RS03170 b6822cdc23c0804223e8e7afea912939 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 8.1E-29 T 23-04-2016 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 SMART SM00382 53 184 1.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 330 9.0E-34 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 Gene3D G3DSA:3.40.50.300 23 181 3.6E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 237 1.3E-114 T 23-04-2016 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 SUPERFAMILY SSF52540 22 254 6.56E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 255 328 1.7E-34 T 23-04-2016 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 PANTHER PTHR13779 1 329 1.4E-180 T 23-04-2016 SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 26 328 2.3E-143 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 Gene3D G3DSA:1.10.10.10 259 329 1.9E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 Gene3D G3DSA:1.10.8.60 185 257 3.2E-31 T 23-04-2016 SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 SUPERFAMILY SSF46785 259 329 1.81E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 331 166.202 T 23-04-2016 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHYC_RS06165 2ad22f83cd37a2048b3c7b0c0a2eaf11 331 PANTHER PTHR13779:SF25 1 329 1.4E-180 T 23-04-2016 SHYC_RS06295 c8d9ba69a39192354bf80edd6a09e35e 214 PANTHER PTHR10509:SF14 19 209 3.0E-49 T 23-04-2016 SHYC_RS06295 c8d9ba69a39192354bf80edd6a09e35e 214 PANTHER PTHR10509 19 209 3.0E-49 T 23-04-2016 SHYC_RS06295 c8d9ba69a39192354bf80edd6a09e35e 214 Gene3D G3DSA:3.40.50.150 6 209 2.7E-53 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS06295 c8d9ba69a39192354bf80edd6a09e35e 214 Pfam PF01596 O-methyltransferase 40 208 1.2E-25 T 23-04-2016 IPR002935 O-methyltransferase, family 3 GO:0008171 SHYC_RS06295 c8d9ba69a39192354bf80edd6a09e35e 214 SUPERFAMILY SSF53335 14 207 8.22E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS07880 caa5ed542a8012cdceeec8063c49d8a9 253 SUPERFAMILY SSF64005 18 246 6.02E-82 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SHYC_RS07880 caa5ed542a8012cdceeec8063c49d8a9 253 Pfam PF01255 Putative undecaprenyl diphosphate synthase 30 251 1.5E-77 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SHYC_RS07880 caa5ed542a8012cdceeec8063c49d8a9 253 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 23 252 38.627 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SHYC_RS07880 caa5ed542a8012cdceeec8063c49d8a9 253 PANTHER PTHR10291 1 253 8.8E-107 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SHYC_RS07880 caa5ed542a8012cdceeec8063c49d8a9 253 Gene3D G3DSA:3.40.1180.10 15 252 1.1E-89 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SHYC_RS07880 caa5ed542a8012cdceeec8063c49d8a9 253 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 197 214 - T 23-04-2016 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 SHYC_RS07880 caa5ed542a8012cdceeec8063c49d8a9 253 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 23 251 2.7E-80 T 23-04-2016 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 135 9.6E-24 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 SMART SM01232 150 244 7.4E-27 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 SUPERFAMILY SSF81624 2 155 1.7E-26 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 151 241 1.9E-16 T 23-04-2016 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 SUPERFAMILY SSF57716 240 289 1.4E-9 T 23-04-2016 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 PANTHER PTHR22993 2 289 5.4E-85 T 23-04-2016 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 Gene3D G3DSA:3.20.190.10 2 147 3.9E-29 T 23-04-2016 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 Gene3D G3DSA:1.10.8.50 151 290 8.7E-35 T 23-04-2016 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 PANTHER PTHR22993:SF15 2 289 5.4E-85 T 23-04-2016 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 SMART SM00898 2 136 2.7E-30 T 23-04-2016 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 289 5.1E-67 T 23-04-2016 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 SHYC_RS05980 17095dc80d8500dad8eb410a960722ff 290 SUPERFAMILY SSF46946 150 241 1.44E-21 T 23-04-2016 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 SHYC_RS01950 38bc24fb5bc4291561ae12a7e37360fb 237 SUPERFAMILY SSF81301 40 233 3.92E-51 T 23-04-2016 SHYC_RS01950 38bc24fb5bc4291561ae12a7e37360fb 237 Pfam PF04607 Region found in RelA / SpoT proteins 77 197 2.4E-34 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 SHYC_RS01950 38bc24fb5bc4291561ae12a7e37360fb 237 SMART SM00954 77 200 6.2E-40 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 SHYC_RS01950 38bc24fb5bc4291561ae12a7e37360fb 237 PANTHER PTHR21262 45 195 2.5E-40 T 23-04-2016 SHYC_RS01950 38bc24fb5bc4291561ae12a7e37360fb 237 Gene3D G3DSA:3.30.460.10 34 180 9.4E-38 T 23-04-2016 SHYC_RS01950 38bc24fb5bc4291561ae12a7e37360fb 237 Gene3D G3DSA:1.10.287.860 183 232 1.6E-12 T 23-04-2016 SHYC_RS05675 231d6d64552ceb76c5d103c3fed51369 235 PANTHER PTHR21600:SF19 1 228 3.4E-70 T 23-04-2016 SHYC_RS05675 231d6d64552ceb76c5d103c3fed51369 235 SMART SM00363 1 64 1.4E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS05675 231d6d64552ceb76c5d103c3fed51369 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 221 1.5E-44 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHYC_RS05675 231d6d64552ceb76c5d103c3fed51369 235 SUPERFAMILY SSF55120 61 225 2.64E-42 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS05675 231d6d64552ceb76c5d103c3fed51369 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHYC_RS05675 231d6d64552ceb76c5d103c3fed51369 235 PANTHER PTHR21600 1 228 3.4E-70 T 23-04-2016 SHYC_RS05675 231d6d64552ceb76c5d103c3fed51369 235 SUPERFAMILY SSF55174 1 58 5.89E-13 T 23-04-2016 SHYC_RS05675 231d6d64552ceb76c5d103c3fed51369 235 Gene3D G3DSA:3.10.290.10 1 64 1.7E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS05675 231d6d64552ceb76c5d103c3fed51369 235 Pfam PF01479 S4 domain 1 44 3.7E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS05675 231d6d64552ceb76c5d103c3fed51369 235 Pfam PF00849 RNA pseudouridylate synthase 62 189 1.5E-17 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 PANTHER PTHR10000:SF8 1 286 9.6E-81 T 23-04-2016 SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 Gene3D G3DSA:3.40.50.1000 1 72 2.5E-52 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 Gene3D G3DSA:3.40.50.1000 199 285 2.5E-52 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 Gene3D G3DSA:3.30.1240.10 83 198 2.2E-35 T 23-04-2016 SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 ProSitePatterns PS01229 Hypothetical cof family signature 2. 234 256 - T 23-04-2016 SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 23-04-2016 IPR000150 Cof protein GO:0016787 SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 SUPERFAMILY SSF56784 1 284 2.31E-68 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 253 1.8E-28 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 280 4.9E-68 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 PANTHER PTHR10000 1 286 9.6E-81 T 23-04-2016 SHYC_RS10580 634add95b81eb05529adaa71a1f2f07e 289 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 280 5.1E-59 T 23-04-2016 IPR000150 Cof protein GO:0016787 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 4 160 9.5E-50 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 SUPERFAMILY SSF48179 180 332 6.97E-58 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 181 319 2.5E-54 T 23-04-2016 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 Gene3D G3DSA:1.10.1040.10 185 327 4.6E-58 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 323 36.042 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 PANTHER PTHR11728 4 332 5.1E-138 T 23-04-2016 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 PIRSF PIRSF000114 1 332 8.1E-108 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 SUPERFAMILY SSF51735 3 179 3.59E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 Gene3D G3DSA:3.40.50.720 2 184 3.2E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 239 256 2.2E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 2.2E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 2.2E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 2.2E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 199 223 2.2E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 174 198 2.2E-41 T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS06960 9e3baddf3631819634b4c1e04c227e69 332 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 189 210 - T 23-04-2016 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 365 4.0E-156 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 SUPERFAMILY SSF81271 281 362 1.09E-36 T 23-04-2016 IPR012676 TGS-like KEGG: 00970+6.1.1.3 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 PANTHER PTHR23305:SF12 1 365 2.6E-204 T 23-04-2016 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 Pfam PF01926 50S ribosome-binding GTPase 5 115 1.1E-22 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.2E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.2E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.2E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.2E-34 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 Gene3D G3DSA:1.10.150.300 131 200 1.3E-28 T 23-04-2016 IPR023192 TGS-like domain SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 Gene3D G3DSA:3.40.50.300 201 268 1.5E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 Gene3D G3DSA:3.40.50.300 4 130 1.5E-45 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 365 44.338 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 PIRSF PIRSF006641 1 365 3.1E-161 T 23-04-2016 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 SUPERFAMILY SSF52540 3 303 3.06E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 Pfam PF06071 Protein of unknown function (DUF933) 281 364 1.5E-39 T 23-04-2016 IPR013029 Domain of unknown function DUF933 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 PANTHER PTHR23305 1 365 2.6E-204 T 23-04-2016 SHYC_RS11610 2db2ca48c4699934fd122891b12a4fa7 365 Gene3D G3DSA:3.10.20.30 269 365 4.6E-48 T 23-04-2016 IPR012675 Beta-grasp domain SHYC_RS04240 92b6868464e4389c57e59ccd246e9512 456 SUPERFAMILY SSF50249 4 61 3.31E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS04240 92b6868464e4389c57e59ccd246e9512 456 Gene3D G3DSA:2.40.50.140 4 80 8.3E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS04240 92b6868464e4389c57e59ccd246e9512 456 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 383 414 - T 23-04-2016 IPR030390 RNA methyltransferase TrmA, active site SHYC_RS04240 92b6868464e4389c57e59ccd246e9512 456 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 17 444 3.3E-149 T 23-04-2016 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 SHYC_RS04240 92b6868464e4389c57e59ccd246e9512 456 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 223 452 1.5E-21 T 23-04-2016 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 SHYC_RS04240 92b6868464e4389c57e59ccd246e9512 456 PANTHER PTHR11061:SF30 4 456 2.0E-173 T 23-04-2016 SHYC_RS04240 92b6868464e4389c57e59ccd246e9512 456 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 434 444 - T 23-04-2016 IPR030391 RNA methyltransferase TrmA, conserved site SHYC_RS04240 92b6868464e4389c57e59ccd246e9512 456 SUPERFAMILY SSF53335 69 451 2.43E-82 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS04240 92b6868464e4389c57e59ccd246e9512 456 PANTHER PTHR11061 4 456 2.0E-173 T 23-04-2016 SHYC_RS04240 92b6868464e4389c57e59ccd246e9512 456 Gene3D G3DSA:3.40.50.150 246 451 9.3E-66 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS10480 090bcaa03fd1655484ee625fef69c471 483 PANTHER PTHR11785:SF405 4 483 9.0E-167 T 23-04-2016 SHYC_RS10480 090bcaa03fd1655484ee625fef69c471 483 PANTHER PTHR11785 4 483 9.0E-167 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS10480 090bcaa03fd1655484ee625fef69c471 483 Pfam PF13520 Amino acid permease 23 440 6.9E-39 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS10480 090bcaa03fd1655484ee625fef69c471 483 PIRSF PIRSF006060 1 477 9.0E-72 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 SUPERFAMILY SSF50447 175 296 7.69E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 SMART SM00838 407 495 1.8E-4 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 SUPERFAMILY SSF54980 408 503 8.15E-26 T 23-04-2016 IPR009022 Elongation factor G, III-V domain SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 Gene3D G3DSA:3.30.70.240 410 499 4.3E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.4E-13 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 Gene3D G3DSA:2.40.30.10 202 298 7.3E-27 T 23-04-2016 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 SUPERFAMILY SSF54980 301 379 3.31E-18 T 23-04-2016 IPR009022 Elongation factor G, III-V domain SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 Pfam PF00679 Elongation factor G C-terminus 408 495 4.1E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 1.6E-48 T 23-04-2016 IPR013842 GTP-binding protein LepA, C-terminal SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 303.67 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 23-04-2016 IPR006297 Elongation factor 4 GO:0005525 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 SUPERFAMILY SSF52540 9 214 3.1E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 PRINTS PR00315 GTP-binding elongation factor signature 15 28 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.4E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 7.2E-53 T 23-04-2016 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 185 1.4E-20 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 PANTHER PTHR23115 406 605 2.0E-289 T 23-04-2016 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 PANTHER PTHR23115 1 382 2.0E-289 T 23-04-2016 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 PANTHER PTHR23115:SF175 406 605 2.0E-289 T 23-04-2016 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 PANTHER PTHR23115:SF175 1 382 2.0E-289 T 23-04-2016 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 Gene3D G3DSA:3.30.70.870 301 378 6.4E-26 T 23-04-2016 SHYC_RS06420 457c3f1c2d578833a76a5933237335e6 607 Gene3D G3DSA:3.40.50.300 8 201 5.3E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02055 2593f6d5c52bd0de47919f08e7c38861 602 Gene3D G3DSA:3.90.25.10 462 543 2.6E-7 T 23-04-2016 SHYC_RS02055 2593f6d5c52bd0de47919f08e7c38861 602 Gene3D G3DSA:3.40.50.720 283 461 3.4E-51 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02055 2593f6d5c52bd0de47919f08e7c38861 602 Pfam PF13727 CoA-binding domain 62 239 5.6E-18 T 23-04-2016 SHYC_RS02055 2593f6d5c52bd0de47919f08e7c38861 602 PANTHER PTHR10366:SF256 283 594 1.4E-134 T 23-04-2016 SHYC_RS02055 2593f6d5c52bd0de47919f08e7c38861 602 SUPERFAMILY SSF51735 141 271 6.69E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02055 2593f6d5c52bd0de47919f08e7c38861 602 Gene3D G3DSA:3.40.50.720 139 236 4.9E-11 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02055 2593f6d5c52bd0de47919f08e7c38861 602 PANTHER PTHR10366 283 594 1.4E-134 T 23-04-2016 SHYC_RS02055 2593f6d5c52bd0de47919f08e7c38861 602 SUPERFAMILY SSF51735 281 546 2.17E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02055 2593f6d5c52bd0de47919f08e7c38861 602 Pfam PF02719 Polysaccharide biosynthesis protein 284 567 5.0E-127 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SHYC_RS06895 d07d1b257a18040503276fccae27711c 246 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 23-04-2016 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHYC_RS06895 d07d1b257a18040503276fccae27711c 246 SUPERFAMILY SSF55120 49 240 2.64E-43 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS06895 d07d1b257a18040503276fccae27711c 246 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 69 229 1.3E-50 T 23-04-2016 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 SHYC_RS06895 d07d1b257a18040503276fccae27711c 246 Pfam PF01479 S4 domain 5 51 1.4E-13 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS06895 d07d1b257a18040503276fccae27711c 246 Pfam PF00849 RNA pseudouridylate synthase 65 199 1.5E-20 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS06895 d07d1b257a18040503276fccae27711c 246 SMART SM00363 5 66 5.0E-14 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS06895 d07d1b257a18040503276fccae27711c 246 Gene3D G3DSA:3.10.290.10 5 67 1.4E-23 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS06895 d07d1b257a18040503276fccae27711c 246 PANTHER PTHR21600:SF2 5 246 9.7E-87 T 23-04-2016 SHYC_RS06895 d07d1b257a18040503276fccae27711c 246 PANTHER PTHR21600 5 246 9.7E-87 T 23-04-2016 SHYC_RS06895 d07d1b257a18040503276fccae27711c 246 SUPERFAMILY SSF55174 5 70 1.37E-14 T 23-04-2016 SHYC_RS10675 9d6fc5290b0888bb093a6c02ab063174 166 SUPERFAMILY SSF160369 5 160 1.16E-54 T 23-04-2016 SHYC_RS10675 9d6fc5290b0888bb093a6c02ab063174 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 28.795 T 23-04-2016 IPR022973 Ribosomal protein L10 SHYC_RS10675 9d6fc5290b0888bb093a6c02ab063174 166 Pfam PF00466 Ribosomal protein L10 6 101 1.8E-31 T 23-04-2016 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 SHYC_RS10675 9d6fc5290b0888bb093a6c02ab063174 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 26 143 0.004 T 23-04-2016 SHYC_RS10675 9d6fc5290b0888bb093a6c02ab063174 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 23-04-2016 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS10675 9d6fc5290b0888bb093a6c02ab063174 166 PANTHER PTHR11560 5 166 1.1E-55 T 23-04-2016 SHYC_RS02150 ba7912ae9f3fe29cc1c59a3d561e4997 258 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 23-04-2016 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SHYC_RS02150 ba7912ae9f3fe29cc1c59a3d561e4997 258 SUPERFAMILY SSF51366 34 254 2.35E-66 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHYC_RS02150 ba7912ae9f3fe29cc1c59a3d561e4997 258 Gene3D G3DSA:3.20.20.70 1 254 8.9E-80 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS02150 ba7912ae9f3fe29cc1c59a3d561e4997 258 Pfam PF00218 Indole-3-glycerol phosphate synthase 4 253 6.8E-72 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SHYC_RS02150 ba7912ae9f3fe29cc1c59a3d561e4997 258 PANTHER PTHR22854 1 253 3.5E-83 T 23-04-2016 SHYC_RS02150 ba7912ae9f3fe29cc1c59a3d561e4997 258 PANTHER PTHR22854:SF2 1 253 3.5E-83 T 23-04-2016 SHYC_RS02150 ba7912ae9f3fe29cc1c59a3d561e4997 258 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 2 255 30.715 T 23-04-2016 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48|UniPathway: UPA00035 SHYC_RS01385 ed99f69d65fe084733cc68d2c10e2261 188 Gene3D G3DSA:1.10.357.10 51 122 1.5E-12 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHYC_RS01385 ed99f69d65fe084733cc68d2c10e2261 188 SUPERFAMILY SSF46689 9 83 6.48E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS01385 ed99f69d65fe084733cc68d2c10e2261 188 Gene3D G3DSA:1.10.10.60 4 50 8.9E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS01385 ed99f69d65fe084733cc68d2c10e2261 188 PANTHER PTHR30055 2 115 1.1E-13 T 23-04-2016 SHYC_RS01385 ed99f69d65fe084733cc68d2c10e2261 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 35 65 2.6E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 Gene3D G3DSA:1.10.10.350 387 483 1.1E-24 T 23-04-2016 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 PANTHER PTHR11451:SF41 3 331 1.2E-105 T 23-04-2016 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 SUPERFAMILY SSF52374 5 316 6.17E-110 T 23-04-2016 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 Gene3D G3DSA:3.40.50.620 5 69 1.5E-50 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 Gene3D G3DSA:3.40.50.620 196 245 1.5E-50 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 5.9E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 5.9E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 5.9E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 5.9E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 5.9E-27 T 23-04-2016 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 Reactome: REACT_71 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 Gene3D G3DSA:1.10.1160.10 247 331 6.3E-33 T 23-04-2016 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: REACT_71 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 SUPERFAMILY SSF48163 298 483 2.88E-46 T 23-04-2016 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 483 4.0E-187 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 Gene3D G3DSA:3.90.800.10 70 195 4.7E-41 T 23-04-2016 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 Hamap MF_00022_B Glutamate--tRNA ligase [gltX]. 5 484 34.401 T 23-04-2016 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 PANTHER PTHR11451 3 331 1.2E-105 T 23-04-2016 SHYC_RS10730 a517b0714e9198c452a2912d0f90417a 484 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 323 7.2E-123 T 23-04-2016 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 Reactome: REACT_71 SHYC_RS04405 90e38a2c776616550e8a33994691601d 578 Pfam PF00005 ABC transporter 357 506 8.2E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS04405 90e38a2c776616550e8a33994691601d 578 PANTHER PTHR24221:SF227 2 578 0.0 T 23-04-2016 SHYC_RS04405 90e38a2c776616550e8a33994691601d 578 SUPERFAMILY SSF52540 331 576 3.67E-96 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04405 90e38a2c776616550e8a33994691601d 578 Gene3D G3DSA:1.20.1560.10 3 321 2.3E-85 T 23-04-2016 SHYC_RS04405 90e38a2c776616550e8a33994691601d 578 Gene3D G3DSA:3.40.50.300 340 570 4.9E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04405 90e38a2c776616550e8a33994691601d 578 SUPERFAMILY SSF90123 3 323 1.27E-79 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS04405 90e38a2c776616550e8a33994691601d 578 Pfam PF00664 ABC transporter transmembrane region 19 294 4.2E-44 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS04405 90e38a2c776616550e8a33994691601d 578 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS04405 90e38a2c776616550e8a33994691601d 578 SMART SM00382 366 552 1.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS04405 90e38a2c776616550e8a33994691601d 578 PANTHER PTHR24221 2 578 0.0 T 23-04-2016 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 SUPERFAMILY SSF54211 5 148 9.11E-31 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 PANTHER PTHR20861 4 276 2.1E-85 T 23-04-2016 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 Pfam PF08544 GHMP kinases C terminal 205 278 6.6E-9 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 SUPERFAMILY SSF55060 166 281 2.24E-32 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 PANTHER PTHR20861:SF1 4 276 2.1E-85 T 23-04-2016 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 Gene3D G3DSA:3.30.230.10 4 155 3.0E-43 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 89 100 - T 23-04-2016 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 TIGRFAM TIGR00191 thrB: homoserine kinase 6 296 4.7E-74 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 Pfam PF00288 GHMP kinases N terminal domain 83 143 8.2E-13 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 PIRSF PIRSF000676 1 301 4.4E-85 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 Gene3D G3DSA:3.30.70.890 164 295 6.5E-39 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 Hamap MF_00384 Homoserine kinase [thrB]. 5 299 30.641 T 23-04-2016 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702|UniPathway: UPA00050 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 PRINTS PR00958 Homoserine kinase signature 170 187 1.1E-35 T 23-04-2016 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 PRINTS PR00958 Homoserine kinase signature 250 265 1.1E-35 T 23-04-2016 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 PRINTS PR00958 Homoserine kinase signature 12 27 1.1E-35 T 23-04-2016 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 PRINTS PR00958 Homoserine kinase signature 130 143 1.1E-35 T 23-04-2016 SHYC_RS07525 76cb4a62ef40e6fbad73a79a25fe11bb 305 PRINTS PR00958 Homoserine kinase signature 96 111 1.1E-35 T 23-04-2016 SHYC_RS06615 e77d31552d34adc1b71d84e710fa66cd 215 Gene3D G3DSA:1.20.58.220 3 105 2.3E-27 T 23-04-2016 SHYC_RS06615 e77d31552d34adc1b71d84e710fa66cd 215 SUPERFAMILY SSF109755 4 211 7.12E-55 T 23-04-2016 SHYC_RS06615 e77d31552d34adc1b71d84e710fa66cd 215 Pfam PF01895 PhoU domain 19 105 5.3E-20 T 23-04-2016 IPR026022 PhoU domain SHYC_RS06615 e77d31552d34adc1b71d84e710fa66cd 215 Pfam PF01895 PhoU domain 120 200 4.1E-18 T 23-04-2016 IPR026022 PhoU domain SHYC_RS06615 e77d31552d34adc1b71d84e710fa66cd 215 Gene3D G3DSA:1.20.58.220 116 212 1.1E-22 T 23-04-2016 SHYC_RS06615 e77d31552d34adc1b71d84e710fa66cd 215 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 5 209 7.1E-61 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SHYC_RS06615 e77d31552d34adc1b71d84e710fa66cd 215 PANTHER PTHR10010:SF14 3 211 3.5E-51 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SHYC_RS06615 e77d31552d34adc1b71d84e710fa66cd 215 PIRSF PIRSF003107 1 215 3.4E-62 T 23-04-2016 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 SHYC_RS06615 e77d31552d34adc1b71d84e710fa66cd 215 PANTHER PTHR10010 3 211 3.5E-51 T 23-04-2016 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 SUPERFAMILY SSF53067 5 187 4.07E-35 T 23-04-2016 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 Gene3D G3DSA:3.30.420.40 294 346 1.7E-21 T 23-04-2016 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 Gene3D G3DSA:3.30.420.40 193 230 1.7E-21 T 23-04-2016 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 Hamap MF_02033 Cell division protein FtsA [ftsA]. 2 478 23.188 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 Pfam PF14450 Cell division protein FtsA 203 364 3.3E-18 T 23-04-2016 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 Pfam PF02491 SHS2 domain inserted in FTSA 86 158 1.8E-10 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 Gene3D G3DSA:3.90.640.10 231 293 3.1E-24 T 23-04-2016 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 PIRSF PIRSF003101 1 428 4.2E-94 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 PANTHER PTHR32432 1 479 2.5E-148 T 23-04-2016 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 6 364 2.9E-82 T 23-04-2016 IPR020823 Cell division protein FtsA GO:0007049 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 PANTHER PTHR32432:SF4 1 479 2.5E-148 T 23-04-2016 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 Gene3D G3DSA:3.30.420.40 2 135 2.6E-26 T 23-04-2016 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 SMART SM00842 6 194 3.0E-44 T 23-04-2016 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 SHYC_RS08275 63a3f2909eb8670bb49ae96fd7f104b3 479 SUPERFAMILY SSF53067 195 361 5.19E-35 T 23-04-2016 SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 Gene3D G3DSA:3.30.70.360 183 298 2.0E-39 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 Pfam PF07687 Peptidase dimerisation domain 187 274 6.5E-10 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 372 7.7E-116 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 PANTHER PTHR11014:SF63 6 383 4.4E-155 T 23-04-2016 SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 SUPERFAMILY SSF53187 2 198 3.71E-80 T 23-04-2016 SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 SUPERFAMILY SSF53187 299 381 3.71E-80 T 23-04-2016 SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 PIRSF PIRSF005962 2 387 2.0E-125 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 Pfam PF01546 Peptidase family M20/M25/M40 73 382 4.2E-29 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 PANTHER PTHR11014 6 383 4.4E-155 T 23-04-2016 SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 Gene3D G3DSA:3.40.630.10 299 382 3.8E-94 T 23-04-2016 SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 Gene3D G3DSA:3.40.630.10 6 179 3.8E-94 T 23-04-2016 SHYC_RS10625 79b867b8259f93dc31cee4c818a500d9 388 SUPERFAMILY SSF55031 185 296 3.27E-29 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS10980 8b2c434a4206a2a52da1489f923b4e84 104 Pfam PF04026 SpoVG 1 82 6.7E-37 T 23-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 SHYC_RS10980 8b2c434a4206a2a52da1489f923b4e84 104 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 92 29.141 T 23-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 SHYC_RS10980 8b2c434a4206a2a52da1489f923b4e84 104 Gene3D G3DSA:3.30.1120.40 1 82 2.3E-38 T 23-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 SHYC_RS10980 8b2c434a4206a2a52da1489f923b4e84 104 PANTHER PTHR38429 2 102 5.6E-52 T 23-04-2016 SHYC_RS10980 8b2c434a4206a2a52da1489f923b4e84 104 SUPERFAMILY SSF160537 1 83 2.35E-33 T 23-04-2016 IPR007170 Stage V sporulation protein G GO:0030435 SHYC_RS01790 56ae65ff387bd250b407d2efc419a4bd 221 PANTHER PTHR23026 1 102 2.2E-77 T 23-04-2016 SHYC_RS01790 56ae65ff387bd250b407d2efc419a4bd 221 PANTHER PTHR23026 131 221 2.2E-77 T 23-04-2016 SHYC_RS01790 56ae65ff387bd250b407d2efc419a4bd 221 PANTHER PTHR23026:SF101 1 102 2.2E-77 T 23-04-2016 SHYC_RS01790 56ae65ff387bd250b407d2efc419a4bd 221 PANTHER PTHR23026:SF101 131 221 2.2E-77 T 23-04-2016 SHYC_RS01790 56ae65ff387bd250b407d2efc419a4bd 221 Pfam PF00881 Nitroreductase family 14 199 3.9E-29 T 23-04-2016 IPR029479 Nitroreductase SHYC_RS01790 56ae65ff387bd250b407d2efc419a4bd 221 SUPERFAMILY SSF55469 8 220 1.57E-54 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 SHYC_RS01790 56ae65ff387bd250b407d2efc419a4bd 221 Gene3D G3DSA:3.40.109.10 6 220 6.3E-72 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 SHYC_RS11015 22527689de997608418129c6eed0aec0 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SHYC_RS11015 22527689de997608418129c6eed0aec0 256 PANTHER PTHR10060:SF20 1 256 1.8E-132 T 23-04-2016 SHYC_RS11015 22527689de997608418129c6eed0aec0 256 PANTHER PTHR10060 1 256 1.8E-132 T 23-04-2016 IPR001130 TatD family GO:0016788 SHYC_RS11015 22527689de997608418129c6eed0aec0 256 PIRSF PIRSF005902 1 256 3.1E-84 T 23-04-2016 IPR001130 TatD family GO:0016788 SHYC_RS11015 22527689de997608418129c6eed0aec0 256 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 23-04-2016 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 SHYC_RS11015 22527689de997608418129c6eed0aec0 256 SUPERFAMILY SSF51556 2 255 7.34E-93 T 23-04-2016 IPR032466 Metal-dependent hydrolase SHYC_RS11015 22527689de997608418129c6eed0aec0 256 Pfam PF01026 TatD related DNase 3 254 8.5E-85 T 23-04-2016 IPR001130 TatD family GO:0016788 SHYC_RS11015 22527689de997608418129c6eed0aec0 256 Gene3D G3DSA:3.20.20.140 1 255 1.4E-97 T 23-04-2016 SHYC_RS11015 22527689de997608418129c6eed0aec0 256 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 254 3.1E-92 T 23-04-2016 IPR015991 Uncharacterised deoxyribonuclease TatD-type GO:0004536 SHYC_RS09530 91aee59a68db389ba1946e4819066c5c 154 Hamap MF_00023 SsrA-binding protein [smpB]. 1 154 73.124 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 SHYC_RS09530 91aee59a68db389ba1946e4819066c5c 154 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 23-04-2016 IPR020081 SsrA-binding protein, conserved site SHYC_RS09530 91aee59a68db389ba1946e4819066c5c 154 PANTHER PTHR30308:SF2 1 154 5.9E-79 T 23-04-2016 SHYC_RS09530 91aee59a68db389ba1946e4819066c5c 154 Pfam PF01668 SmpB protein 10 73 3.0E-32 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 SHYC_RS09530 91aee59a68db389ba1946e4819066c5c 154 SUPERFAMILY SSF74982 4 133 8.5E-53 T 23-04-2016 IPR023620 Small protein B SHYC_RS09530 91aee59a68db389ba1946e4819066c5c 154 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 5.7E-59 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 SHYC_RS09530 91aee59a68db389ba1946e4819066c5c 154 PANTHER PTHR30308 1 154 5.9E-79 T 23-04-2016 SHYC_RS09530 91aee59a68db389ba1946e4819066c5c 154 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 133 2.0E-61 T 23-04-2016 IPR000037 SsrA-binding protein GO:0003723 SHYC_RS09530 91aee59a68db389ba1946e4819066c5c 154 Gene3D G3DSA:2.40.280.10 9 128 9.6E-53 T 23-04-2016 IPR023620 Small protein B SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 SUPERFAMILY SSF56300 139 423 1.7E-72 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 SUPERFAMILY SSF55816 427 629 1.44E-47 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 Gene3D G3DSA:3.60.21.10 138 422 4.5E-80 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 PANTHER PTHR11575:SF7 142 624 3.6E-118 T 23-04-2016 SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 Pfam PF00149 Calcineurin-like phosphoesterase 141 351 7.3E-12 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 PRINTS PR01607 Apyrase family signature 302 319 4.9E-22 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 PRINTS PR01607 Apyrase family signature 576 595 4.9E-22 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 PRINTS PR01607 Apyrase family signature 139 157 4.9E-22 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 PRINTS PR01607 Apyrase family signature 334 357 4.9E-22 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 PRINTS PR01607 Apyrase family signature 487 510 4.9E-22 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 732 760 0.0012 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 PANTHER PTHR11575 142 624 3.6E-118 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 Pfam PF02872 5'-nucleotidase, C-terminal domain 439 602 1.2E-39 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SHYC_RS02380 08fba910fa2e97fdd62f06717b43eb43 763 Gene3D G3DSA:3.90.780.10 432 636 2.2E-48 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 Pfam PF13167 GTP-binding GTPase N-terminal 32 119 1.3E-28 T 23-04-2016 IPR025121 GTPase HflX, N-terminal SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 SUPERFAMILY SSF52540 205 373 3.62E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 15 361 2.3E-135 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 Pfam PF01926 50S ribosome-binding GTPase 206 325 1.8E-18 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 207 227 2.5E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 274 292 2.5E-6 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 Gene3D G3DSA:3.40.50.300 205 356 4.0E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 Hamap MF_00900 GTPase HflX [hflX]. 34 391 42.902 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 Pfam PF16360 GTP-binding GTPase Middle Region 121 199 8.4E-32 T 23-04-2016 IPR032305 GTP-binding protein, middle domain SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 PANTHER PTHR10229 4 405 5.2E-143 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 PIRSF PIRSF006809 7 409 1.6E-141 T 23-04-2016 IPR016496 GTPase HflX GO:0005525 SHYC_RS07625 2535affa6d8d618a66aa0fd511e5fcb8 409 PANTHER PTHR10229:SF0 4 405 5.2E-143 T 23-04-2016 SHYC_RS03150 e24af031c1ec48c15dcf133cfa047778 59 PANTHER PTHR15892 1 58 7.8E-27 T 23-04-2016 SHYC_RS03150 e24af031c1ec48c15dcf133cfa047778 59 PANTHER PTHR15892:SF2 1 58 7.8E-27 T 23-04-2016 SHYC_RS03150 e24af031c1ec48c15dcf133cfa047778 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 1.4E-27 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SHYC_RS03150 e24af031c1ec48c15dcf133cfa047778 59 SUPERFAMILY SSF55129 4 58 1.09E-20 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SHYC_RS03150 e24af031c1ec48c15dcf133cfa047778 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.534 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SHYC_RS03150 e24af031c1ec48c15dcf133cfa047778 59 PIRSF PIRSF002211 1 59 2.8E-27 T 23-04-2016 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 SHYC_RS03150 e24af031c1ec48c15dcf133cfa047778 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 2.1E-21 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SHYC_RS03150 e24af031c1ec48c15dcf133cfa047778 59 Gene3D G3DSA:3.30.1390.20 1 58 4.4E-29 T 23-04-2016 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 PANTHER PTHR11455 74 463 1.8E-108 T 23-04-2016 SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 Pfam PF00875 DNA photolyase 12 156 3.8E-10 T 23-04-2016 IPR006050 DNA photolyase, N-terminal SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 PRINTS PR00147 DNA photolyase signature 364 378 3.3E-24 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 PRINTS PR00147 DNA photolyase signature 325 343 3.3E-24 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 PRINTS PR00147 DNA photolyase signature 305 321 3.3E-24 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 PRINTS PR00147 DNA photolyase signature 137 153 3.3E-24 T 23-04-2016 IPR002081 Cryptochrome/DNA photolyase class 1 SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 Gene3D G3DSA:1.25.40.80 143 264 1.1E-23 T 23-04-2016 SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 Pfam PF03441 FAD binding domain of DNA photolyase 256 455 7.3E-73 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 Gene3D G3DSA:3.40.50.620 12 142 4.9E-9 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 Gene3D G3DSA:1.10.579.10 265 456 3.6E-67 T 23-04-2016 SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 SUPERFAMILY SSF48173 191 458 3.79E-88 T 23-04-2016 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 PANTHER PTHR11455:SF18 74 463 1.8E-108 T 23-04-2016 SHYC_RS00770 d16ba07de5e0e5ef746758a4dd67cf89 463 SUPERFAMILY SSF52425 7 158 2.09E-14 T 23-04-2016 IPR006050 DNA photolyase, N-terminal SHYC_RS02665 e8ec8051cbd900c43f4f807a17b60a31 66 PANTHER PTHR10245:SF50 1 63 1.8E-30 T 23-04-2016 SHYC_RS02665 e8ec8051cbd900c43f4f807a17b60a31 66 PANTHER PTHR10245 1 63 1.8E-30 T 23-04-2016 SHYC_RS02665 e8ec8051cbd900c43f4f807a17b60a31 66 SMART SM00530 4 59 1.1E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS02665 e8ec8051cbd900c43f4f807a17b60a31 66 Pfam PF01381 Helix-turn-helix 5 57 3.5E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS02665 e8ec8051cbd900c43f4f807a17b60a31 66 SUPERFAMILY SSF47413 3 64 1.02E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS02665 e8ec8051cbd900c43f4f807a17b60a31 66 Gene3D G3DSA:1.10.260.40 1 64 7.9E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS02065 4d097e8c445208fd3933075467ab987b 369 SUPERFAMILY SSF51735 1 217 2.66E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02065 4d097e8c445208fd3933075467ab987b 369 PANTHER PTHR10366:SF418 2 215 6.7E-47 T 23-04-2016 SHYC_RS02065 4d097e8c445208fd3933075467ab987b 369 SUPERFAMILY SSF51182 239 366 2.55E-23 T 23-04-2016 IPR011051 RmlC-like cupin domain SHYC_RS02065 4d097e8c445208fd3933075467ab987b 369 Gene3D G3DSA:3.40.50.720 1 167 1.6E-22 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02065 4d097e8c445208fd3933075467ab987b 369 PANTHER PTHR10366 2 215 6.7E-47 T 23-04-2016 SHYC_RS02065 4d097e8c445208fd3933075467ab987b 369 Gene3D G3DSA:2.60.120.10 168 200 4.2E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold SHYC_RS02065 4d097e8c445208fd3933075467ab987b 369 Gene3D G3DSA:2.60.120.10 245 367 4.2E-23 T 23-04-2016 IPR014710 RmlC-like jelly roll fold SHYC_RS02065 4d097e8c445208fd3933075467ab987b 369 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 185 1.6E-13 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SHYC_RS06965 df324ea1757384ed07ec566051ed2732 90 SMART SM00411 1 90 3.7E-51 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHYC_RS06965 df324ea1757384ed07ec566051ed2732 90 PANTHER PTHR33175 1 90 5.5E-51 T 23-04-2016 SHYC_RS06965 df324ea1757384ed07ec566051ed2732 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.4E-37 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHYC_RS06965 df324ea1757384ed07ec566051ed2732 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 23-04-2016 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 SHYC_RS06965 df324ea1757384ed07ec566051ed2732 90 SUPERFAMILY SSF47729 1 90 1.62E-35 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SHYC_RS06965 df324ea1757384ed07ec566051ed2732 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.5E-21 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHYC_RS06965 df324ea1757384ed07ec566051ed2732 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.5E-21 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHYC_RS06965 df324ea1757384ed07ec566051ed2732 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.5E-21 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHYC_RS06965 df324ea1757384ed07ec566051ed2732 90 Gene3D G3DSA:4.10.520.10 1 90 1.3E-41 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SHYC_RS00995 b9e513e43b17892ab4a18baed8df0795 467 Gene3D G3DSA:3.20.20.140 3 43 2.2E-141 T 23-04-2016 SHYC_RS00995 b9e513e43b17892ab4a18baed8df0795 467 Gene3D G3DSA:3.20.20.140 137 466 2.2E-141 T 23-04-2016 SHYC_RS00995 b9e513e43b17892ab4a18baed8df0795 467 SUPERFAMILY SSF51556 1 465 4.25E-168 T 23-04-2016 IPR032466 Metal-dependent hydrolase SHYC_RS00995 b9e513e43b17892ab4a18baed8df0795 467 Hamap MF_00675 Uronate isomerase [uxaC]. 1 466 46.608 T 23-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 SHYC_RS00995 b9e513e43b17892ab4a18baed8df0795 467 Pfam PF02614 Glucuronate isomerase 1 464 3.7E-201 T 23-04-2016 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 SHYC_RS00995 b9e513e43b17892ab4a18baed8df0795 467 Gene3D G3DSA:1.10.2020.10 45 134 1.8E-39 T 23-04-2016 IPR023177 Uronate isomerase, domain 2 GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248|UniPathway: UPA00246 SHYC_RS00995 b9e513e43b17892ab4a18baed8df0795 467 PANTHER PTHR30068 1 466 2.3E-207 T 23-04-2016 SHYC_RS00995 b9e513e43b17892ab4a18baed8df0795 467 PANTHER PTHR30068:SF4 1 466 2.3E-207 T 23-04-2016 SHYC_RS03815 cb5bf8f8080548c0e62df814a7d42350 116 SUPERFAMILY SSF56214 1 115 2.22E-31 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS03815 cb5bf8f8080548c0e62df814a7d42350 116 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 115 6.0E-35 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS03815 cb5bf8f8080548c0e62df814a7d42350 116 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 24.299 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS03815 cb5bf8f8080548c0e62df814a7d42350 116 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 104 2.5E-20 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS03815 cb5bf8f8080548c0e62df814a7d42350 116 Gene3D G3DSA:3.90.470.20 1 116 7.8E-38 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS03815 cb5bf8f8080548c0e62df814a7d42350 116 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 116 4.8E-37 T 23-04-2016 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS03815 cb5bf8f8080548c0e62df814a7d42350 116 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 115 1.4E-29 T 23-04-2016 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS01980 2d3e94a611b5d5265bc85663108fe796 204 SUPERFAMILY SSF102198 2 201 5.23E-53 T 23-04-2016 SHYC_RS01980 2d3e94a611b5d5265bc85663108fe796 204 Pfam PF04199 Putative cyclase 3 146 9.3E-21 T 23-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 SHYC_RS01980 2d3e94a611b5d5265bc85663108fe796 204 PANTHER PTHR31118 1 200 1.2E-39 T 23-04-2016 SHYC_RS01980 2d3e94a611b5d5265bc85663108fe796 204 Gene3D G3DSA:3.50.30.50 2 200 2.1E-52 T 23-04-2016 SHYC_RS08080 0ec33db5976fe0ae34213bc372af5a46 62 PANTHER PTHR39080 2 62 3.2E-24 T 23-04-2016 SHYC_RS08080 0ec33db5976fe0ae34213bc372af5a46 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 2.7E-21 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS08080 0ec33db5976fe0ae34213bc372af5a46 62 Pfam PF00830 Ribosomal L28 family 3 58 2.4E-19 T 23-04-2016 IPR026569 Ribosomal protein L28/L24 GO:0003735 SHYC_RS08080 0ec33db5976fe0ae34213bc372af5a46 62 PANTHER PTHR39080:SF1 2 62 3.2E-24 T 23-04-2016 SHYC_RS08080 0ec33db5976fe0ae34213bc372af5a46 62 Gene3D G3DSA:4.10.1160.10 19 61 1.4E-22 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS08080 0ec33db5976fe0ae34213bc372af5a46 62 SUPERFAMILY SSF143800 1 60 2.75E-23 T 23-04-2016 SHYC_RS08080 0ec33db5976fe0ae34213bc372af5a46 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 18.47 T 23-04-2016 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03130 091cfd39c17b5e95d027c143ece4f97a 132 Pfam PF00410 Ribosomal protein S8 5 132 5.8E-54 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03130 091cfd39c17b5e95d027c143ece4f97a 132 Gene3D G3DSA:3.30.1370.30 3 73 1.1E-29 T 23-04-2016 SHYC_RS03130 091cfd39c17b5e95d027c143ece4f97a 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 32.966 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03130 091cfd39c17b5e95d027c143ece4f97a 132 Gene3D G3DSA:3.30.1490.10 76 132 5.8E-29 T 23-04-2016 SHYC_RS03130 091cfd39c17b5e95d027c143ece4f97a 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03130 091cfd39c17b5e95d027c143ece4f97a 132 PANTHER PTHR11758 1 132 6.1E-66 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03130 091cfd39c17b5e95d027c143ece4f97a 132 SUPERFAMILY SSF56047 4 132 8.37E-48 T 23-04-2016 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 SHYC_RS02610 9cd05e3b34f6f64a7008442a1b9b9c7c 400 PANTHER PTHR13748:SF4 349 389 3.7E-188 T 23-04-2016 SHYC_RS02610 9cd05e3b34f6f64a7008442a1b9b9c7c 400 PANTHER PTHR13748:SF4 1 333 3.7E-188 T 23-04-2016 SHYC_RS02610 9cd05e3b34f6f64a7008442a1b9b9c7c 400 Gene3D G3DSA:3.30.1220.10 247 375 2.9E-21 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHYC_RS02610 9cd05e3b34f6f64a7008442a1b9b9c7c 400 SMART SM00833 260 375 1.8E-48 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHYC_RS02610 9cd05e3b34f6f64a7008442a1b9b9c7c 400 PANTHER PTHR13748 349 389 3.7E-188 T 23-04-2016 SHYC_RS02610 9cd05e3b34f6f64a7008442a1b9b9c7c 400 PANTHER PTHR13748 1 333 3.7E-188 T 23-04-2016 SHYC_RS02610 9cd05e3b34f6f64a7008442a1b9b9c7c 400 SUPERFAMILY SSF52540 2 315 3.32E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02610 9cd05e3b34f6f64a7008442a1b9b9c7c 400 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 260 375 9.5E-27 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHYC_RS02610 9cd05e3b34f6f64a7008442a1b9b9c7c 400 Gene3D G3DSA:3.40.50.300 2 229 1.3E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02610 9cd05e3b34f6f64a7008442a1b9b9c7c 400 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 210 7.6E-60 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SHYC_RS08530 d5fa6ef725b057f8bf88c1678a5da241 65 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 4 50 5.1E-18 T 23-04-2016 IPR019241 Protein of unknown function DUF2197 SHYC_RS00300 ac2069070d8c8b570cfe977871c18e66 577 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS00300 ac2069070d8c8b570cfe977871c18e66 577 SMART SM00382 359 551 2.7E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS00300 ac2069070d8c8b570cfe977871c18e66 577 Pfam PF00005 ABC transporter 351 499 1.3E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS00300 ac2069070d8c8b570cfe977871c18e66 577 Pfam PF00664 ABC transporter transmembrane region 19 289 1.2E-17 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS00300 ac2069070d8c8b570cfe977871c18e66 577 PANTHER PTHR24221 1 577 0.0 T 23-04-2016 SHYC_RS00300 ac2069070d8c8b570cfe977871c18e66 577 SUPERFAMILY SSF90123 8 322 1.7E-48 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS00300 ac2069070d8c8b570cfe977871c18e66 577 SUPERFAMILY SSF52540 330 567 2.25E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00300 ac2069070d8c8b570cfe977871c18e66 577 PANTHER PTHR24221:SF195 1 577 0.0 T 23-04-2016 SHYC_RS00300 ac2069070d8c8b570cfe977871c18e66 577 Gene3D G3DSA:1.20.1560.10 7 319 1.9E-38 T 23-04-2016 SHYC_RS00300 ac2069070d8c8b570cfe977871c18e66 577 Gene3D G3DSA:3.40.50.300 335 563 1.7E-78 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 Gene3D G3DSA:3.40.50.720 1 89 4.3E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 PANTHER PTHR23135 1 421 4.9E-157 T 23-04-2016 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 Pfam PF01225 Mur ligase family, catalytic domain 3 101 1.0E-22 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 SUPERFAMILY SSF53244 294 429 9.34E-35 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 Gene3D G3DSA:3.90.190.20 297 430 2.7E-40 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 PANTHER PTHR23135:SF5 1 421 4.9E-157 T 23-04-2016 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 SUPERFAMILY SSF51984 1 88 2.94E-20 T 23-04-2016 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 SUPERFAMILY SSF53623 87 293 3.92E-56 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 Gene3D G3DSA:3.40.1190.10 90 296 3.7E-60 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 376 3.7E-19 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 Pfam PF08245 Mur ligase middle domain 106 274 9.1E-24 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 433 34.888 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS05740 f03c8662911a3ec3715d4fdec5ceeb20 437 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 3 427 8.4E-127 T 23-04-2016 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 PIRSF PIRSF000429 1 394 2.8E-125 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 Pfam PF02803 Thiolase, C-terminal domain 270 391 6.9E-46 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 Gene3D G3DSA:3.40.47.10 4 127 2.7E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 Gene3D G3DSA:3.40.47.10 186 275 2.7E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 SUPERFAMILY SSF53901 1 265 1.02E-69 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 PANTHER PTHR18919:SF87 1 394 2.0E-226 T 23-04-2016 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 23-04-2016 IPR020610 Thiolase, active site GO:0008152|GO:0016747 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 PANTHER PTHR18919 1 394 2.0E-226 T 23-04-2016 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 88 106 - T 23-04-2016 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 Reactome: REACT_22258 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 Gene3D G3DSA:3.40.47.10 276 391 3.3E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 Gene3D G3DSA:3.40.47.10 141 185 3.3E-65 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 SUPERFAMILY SSF53901 270 392 6.45E-40 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 Pfam PF00108 Thiolase, N-terminal domain 5 261 2.6E-69 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SHYC_RS01095 d4470abb504d382872eb1e4c16366975 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.4E-134 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 12 426 2.1E-115 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 ProSitePatterns PS00104 EPSP synthase signature 1. 86 100 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 PIRSF PIRSF000505 1 429 3.0E-108 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 PANTHER PTHR21090:SF5 1 425 1.2E-167 T 23-04-2016 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 PANTHER PTHR21090 1 425 1.2E-167 T 23-04-2016 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 Gene3D G3DSA:3.65.10.10 20 231 2.3E-52 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 8 428 31.792 T 23-04-2016 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 SUPERFAMILY SSF55205 7 425 2.35E-122 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 420 2.0E-124 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 ProSitePatterns PS00885 EPSP synthase signature 2. 339 357 - T 23-04-2016 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS07000 f0f11c37d15f113a0744d56f158f8dfe 429 Gene3D G3DSA:3.65.10.10 232 425 1.1E-48 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHYC_RS07925 9dc6818b586412dd818165a0fcd0adcb 434 SUPERFAMILY SSF51905 3 364 2.83E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS07925 9dc6818b586412dd818165a0fcd0adcb 434 PANTHER PTHR11806:SF2 1 434 1.0E-246 T 23-04-2016 SHYC_RS07925 9dc6818b586412dd818165a0fcd0adcb 434 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 2 432 5.3E-222 T 23-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 SHYC_RS07925 9dc6818b586412dd818165a0fcd0adcb 434 Gene3D G3DSA:3.50.50.60 4 51 7.7E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS07925 9dc6818b586412dd818165a0fcd0adcb 434 Gene3D G3DSA:3.50.50.60 283 364 7.7E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS07925 9dc6818b586412dd818165a0fcd0adcb 434 Gene3D G3DSA:3.50.50.60 96 150 7.7E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS07925 9dc6818b586412dd818165a0fcd0adcb 434 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 335 358 - T 23-04-2016 IPR020595 MnmG-related, conserved site SHYC_RS07925 9dc6818b586412dd818165a0fcd0adcb 434 Pfam PF01134 Glucose inhibited division protein A 4 365 1.1E-112 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SHYC_RS07925 9dc6818b586412dd818165a0fcd0adcb 434 PANTHER PTHR11806 1 434 1.0E-246 T 23-04-2016 SHYC_RS07925 9dc6818b586412dd818165a0fcd0adcb 434 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 4 433 36.4 T 23-04-2016 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 PANTHER PTHR11014:SF115 422 510 3.1E-70 T 23-04-2016 SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 PANTHER PTHR11014:SF115 1 104 3.1E-70 T 23-04-2016 SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 PANTHER PTHR11014:SF115 126 322 3.1E-70 T 23-04-2016 SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 PIRSF PIRSF010386 1 533 8.0E-158 T 23-04-2016 IPR012166 Uncharacterised protein family RocB SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 Gene3D G3DSA:3.40.630.10 13 301 1.5E-32 T 23-04-2016 SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 SUPERFAMILY SSF53187 12 221 1.41E-23 T 23-04-2016 SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 SUPERFAMILY SSF53187 456 514 1.41E-23 T 23-04-2016 SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 PANTHER PTHR11014 422 510 3.1E-70 T 23-04-2016 SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 PANTHER PTHR11014 1 104 3.1E-70 T 23-04-2016 SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 PANTHER PTHR11014 126 322 3.1E-70 T 23-04-2016 SHYC_RS02425 08be446ae7e00bc62e07d5c9335011d4 533 Pfam PF01546 Peptidase family M20/M25/M40 126 433 9.7E-10 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS06845 07bb604aeb64c0c5ce43b0a475250524 305 Pfam PF12706 Beta-lactamase superfamily domain 50 152 1.4E-9 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06845 07bb604aeb64c0c5ce43b0a475250524 305 Gene3D G3DSA:3.60.15.10 3 304 4.7E-72 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06845 07bb604aeb64c0c5ce43b0a475250524 305 PANTHER PTHR12553 182 305 1.3E-72 T 23-04-2016 SHYC_RS06845 07bb604aeb64c0c5ce43b0a475250524 305 PANTHER PTHR12553 1 152 1.3E-72 T 23-04-2016 SHYC_RS06845 07bb604aeb64c0c5ce43b0a475250524 305 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 303 7.0E-98 T 23-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SHYC_RS06845 07bb604aeb64c0c5ce43b0a475250524 305 SUPERFAMILY SSF56281 1 300 1.17E-67 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06845 07bb604aeb64c0c5ce43b0a475250524 305 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 34.367 T 23-04-2016 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 SHYC_RS04220 765dca84274d9dc3faa409f14623fb16 100 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 23.363 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHYC_RS04220 765dca84274d9dc3faa409f14623fb16 100 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 95 1.7E-28 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHYC_RS04220 765dca84274d9dc3faa409f14623fb16 100 PANTHER PTHR15004 1 100 3.5E-33 T 23-04-2016 SHYC_RS04220 765dca84274d9dc3faa409f14623fb16 100 SUPERFAMILY SSF141000 4 94 2.48E-28 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHYC_RS04220 765dca84274d9dc3faa409f14623fb16 100 PANTHER PTHR15004:SF0 1 100 3.5E-33 T 23-04-2016 SHYC_RS04220 765dca84274d9dc3faa409f14623fb16 100 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 21 91 8.7E-18 T 23-04-2016 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 164 176 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 Gene3D G3DSA:3.20.20.70 3 319 1.4E-87 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 SMART SM01240 2 325 1.3E-117 T 23-04-2016 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 3 323 1.6E-197 T 23-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 PIRSF PIRSF036500 1 325 9.6E-192 T 23-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 Hamap MF_01511 GMP reductase [guaC]. 1 324 63.332 T 23-04-2016 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 PANTHER PTHR11911:SF97 169 314 4.2E-149 T 23-04-2016 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 PANTHER PTHR11911:SF97 6 151 4.2E-149 T 23-04-2016 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 PANTHER PTHR11911 169 314 4.2E-149 T 23-04-2016 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 PANTHER PTHR11911 6 151 4.2E-149 T 23-04-2016 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 SUPERFAMILY SSF51412 3 314 9.03E-93 T 23-04-2016 SHYC_RS07490 bfd67b3ea7c7a751d248496df7e86189 325 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 5 310 9.8E-71 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SHYC_RS06300 40efb4df3a40839b8256ba37bd388253 309 PANTHER PTHR30217:SF7 1 307 1.1E-165 T 23-04-2016 SHYC_RS06300 40efb4df3a40839b8256ba37bd388253 309 PANTHER PTHR30217 1 307 1.1E-165 T 23-04-2016 SHYC_RS06300 40efb4df3a40839b8256ba37bd388253 309 Pfam PF01136 Peptidase family U32 73 306 5.5E-64 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 SUPERFAMILY SSF53901 5 252 1.6E-76 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 5 247 1.3E-61 T 23-04-2016 IPR014030 Beta-ketoacyl synthase, N-terminal SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 PANTHER PTHR11712 1 412 2.8E-214 T 23-04-2016 SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 23-04-2016 IPR018201 Beta-ketoacyl synthase, active site SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 PIRSF PIRSF000447 2 414 1.1E-181 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 Gene3D G3DSA:3.40.47.10 3 260 5.1E-79 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 SUPERFAMILY SSF53901 215 413 1.61E-70 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 5 410 8.5E-191 T 23-04-2016 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 UniPathway: UPA00094 SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 SMART SM00825 Beta-ketoacyl synthase 7 414 1.7E-17 T 23-04-2016 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 Gene3D G3DSA:3.40.47.10 264 413 9.0E-61 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS09155 57c6893113754ed72f9a9e827f306d94 414 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 2.7E-38 T 23-04-2016 IPR014031 Beta-ketoacyl synthase, C-terminal SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 PANTHER PTHR22594:SF5 1 303 6.3E-258 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 PANTHER PTHR22594:SF5 372 574 6.3E-258 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 SUPERFAMILY SSF50249 4 108 4.0E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 Gene3D G3DSA:3.30.1360.30 283 416 4.4E-48 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 9.1E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 9.1E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 9.1E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 9.1E-27 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 SUPERFAMILY SSF55261 295 421 3.43E-41 T 23-04-2016 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 4 585 6.7E-258 T 23-04-2016 IPR004524 Aspartate-tRNA ligase, bacterial/mitochondrial-type GO:0005524|GO:0016874 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 PANTHER PTHR22594 1 303 6.3E-258 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 PANTHER PTHR22594 372 574 6.3E-258 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 Pfam PF02938 GAD domain 314 408 3.6E-30 T 23-04-2016 IPR029351 GAD domain SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 SUPERFAMILY SSF55681 118 298 8.81E-109 T 23-04-2016 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 SUPERFAMILY SSF55681 427 586 8.81E-109 T 23-04-2016 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 Gene3D G3DSA:2.40.50.140 4 111 1.7E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 Pfam PF01336 OB-fold nucleic acid binding domain 20 105 2.8E-19 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 Gene3D G3DSA:3.30.930.10 138 282 3.0E-117 T 23-04-2016 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 Gene3D G3DSA:3.30.930.10 417 587 3.0E-117 T 23-04-2016 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 Pfam PF00152 tRNA synthetases class II (D, K and N) 123 560 2.3E-111 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06220 65fd1e37270123ba03a43e20e37dcc81 588 Hamap MF_00044 Aspartate--tRNA(Asp) ligase [aspS]. 3 566 37.379 T 23-04-2016 SHYC_RS02555 89c4a4b4ac3e18105c3af06f711cf088 353 PANTHER PTHR30572:SF11 1 352 4.0E-72 T 23-04-2016 SHYC_RS02555 89c4a4b4ac3e18105c3af06f711cf088 353 Pfam PF02687 FtsX-like permease family 234 345 1.3E-9 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHYC_RS02555 89c4a4b4ac3e18105c3af06f711cf088 353 PANTHER PTHR30572 1 352 4.0E-72 T 23-04-2016 SHYC_RS03100 d72600bafa5eaa081ff53cfd4799df9a 69 PANTHER PTHR10916 1 66 4.3E-29 T 23-04-2016 SHYC_RS03100 d72600bafa5eaa081ff53cfd4799df9a 69 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.0E-22 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03100 d72600bafa5eaa081ff53cfd4799df9a 69 PANTHER PTHR10916:SF0 1 66 4.3E-29 T 23-04-2016 SHYC_RS03100 d72600bafa5eaa081ff53cfd4799df9a 69 Pfam PF00831 Ribosomal L29 protein 4 60 3.9E-24 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03100 d72600bafa5eaa081ff53cfd4799df9a 69 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.504 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03100 d72600bafa5eaa081ff53cfd4799df9a 69 Gene3D G3DSA:1.10.287.310 1 63 3.8E-29 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03100 d72600bafa5eaa081ff53cfd4799df9a 69 SUPERFAMILY SSF46561 1 63 4.71E-23 T 23-04-2016 IPR001854 Ribosomal protein L29 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 SUPERFAMILY SSF52113 588 659 4.49E-18 T 23-04-2016 IPR001357 BRCT domain SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Pfam PF12826 Helix-hairpin-helix motif 502 564 4.6E-19 T 23-04-2016 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 SMART SM00278 437 456 31.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 SMART SM00278 471 490 7.4 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 SMART SM00278 535 554 36.0 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 SUPERFAMILY SSF47781 395 574 1.02E-59 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 399 425 2.4E-10 T 23-04-2016 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 323 338 - T 23-04-2016 IPR033136 NAD-dependent DNA ligase, conserved site SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 SUPERFAMILY SSF50249 309 393 3.08E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 SMART SM00292 588 664 1.2E-7 T 23-04-2016 IPR001357 BRCT domain SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 111 140 - T 23-04-2016 IPR018239 NAD-dependent DNA ligase, active site SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Gene3D G3DSA:3.40.50.10190 589 659 2.6E-21 T 23-04-2016 IPR001357 BRCT domain SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Gene3D G3DSA:1.10.150.20 495 575 3.2E-22 T 23-04-2016 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Hamap MF_01588 DNA ligase [ligA]. 1 661 50.694 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Gene3D G3DSA:1.10.150.20 426 494 1.3E-30 T 23-04-2016 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 310 6.3E-127 T 23-04-2016 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Gene3D G3DSA:3.30.470.30 115 244 2.9E-48 T 23-04-2016 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 314 390 1.1E-33 T 23-04-2016 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 10 657 2.3E-261 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 PIRSF PIRSF001604 1 664 1.1E-248 T 23-04-2016 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Gene3D G3DSA:1.10.287.610 3 65 1.9E-25 T 23-04-2016 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 PANTHER PTHR23389:SF9 1 523 1.9E-201 T 23-04-2016 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Pfam PF14520 Helix-hairpin-helix domain 437 492 3.8E-5 T 23-04-2016 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 PANTHER PTHR23389 1 523 1.9E-201 T 23-04-2016 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 590 659 1.7E-12 T 23-04-2016 IPR001357 BRCT domain SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 SUPERFAMILY SSF56091 2 310 6.17E-119 T 23-04-2016 SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 Gene3D G3DSA:2.40.50.140 312 383 1.5E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS04205 5947162b01b66f008c33c7747503933c 665 SMART SM00532 2 439 1.8E-270 T 23-04-2016 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 SUPERFAMILY SSF50494 93 311 5.4E-56 T 23-04-2016 IPR009003 Peptidase S1, PA clan SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 Gene3D G3DSA:2.30.42.10 317 406 3.0E-16 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 Pfam PF13180 PDZ domain 315 404 2.9E-15 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 PRINTS PR00834 HtrA/DegQ protease family signature 145 157 3.4E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 PRINTS PR00834 HtrA/DegQ protease family signature 207 231 3.4E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 PRINTS PR00834 HtrA/DegQ protease family signature 352 364 3.4E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 PRINTS PR00834 HtrA/DegQ protease family signature 248 265 3.4E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 PRINTS PR00834 HtrA/DegQ protease family signature 166 186 3.4E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 PRINTS PR00834 HtrA/DegQ protease family signature 270 287 3.4E-37 T 23-04-2016 IPR001940 Peptidase S1C GO:0004252|GO:0006508 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 PANTHER PTHR22939:SF79 92 407 3.5E-102 T 23-04-2016 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 Gene3D G3DSA:2.40.10.10 127 207 3.5E-29 T 23-04-2016 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 Gene3D G3DSA:2.40.10.10 208 316 2.1E-42 T 23-04-2016 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 SUPERFAMILY SSF50156 299 404 3.42E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 PANTHER PTHR22939 92 407 3.5E-102 T 23-04-2016 SHYC_RS05795 a335a042e598191e2233d802f14fb03f 408 Pfam PF13365 Trypsin-like peptidase domain 133 277 2.0E-32 T 23-04-2016 SHYC_RS09375 61a3fcbc8b0d59b7a0c24c82c5fb19c7 484 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 29 410 1.1E-95 T 23-04-2016 IPR010071 Amino acid adenylation domain SHYC_RS09375 61a3fcbc8b0d59b7a0c24c82c5fb19c7 484 Gene3D G3DSA:3.40.50.980 4 144 7.4E-31 T 23-04-2016 SHYC_RS09375 61a3fcbc8b0d59b7a0c24c82c5fb19c7 484 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 3 481 3.7E-173 T 23-04-2016 IPR010072 D-alanine--poly(phosphoribitol) ligase subunit 1 GO:0005524|GO:0047473|GO:0070395 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SHYC_RS09375 61a3fcbc8b0d59b7a0c24c82c5fb19c7 484 Gene3D G3DSA:2.30.38.10 314 372 5.5E-8 T 23-04-2016 SHYC_RS09375 61a3fcbc8b0d59b7a0c24c82c5fb19c7 484 Pfam PF13193 AMP-binding enzyme C-terminal domain 394 472 1.0E-8 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SHYC_RS09375 61a3fcbc8b0d59b7a0c24c82c5fb19c7 484 Gene3D G3DSA:3.40.50.980 145 313 5.0E-38 T 23-04-2016 SHYC_RS09375 61a3fcbc8b0d59b7a0c24c82c5fb19c7 484 Gene3D G3DSA:3.30.300.30 380 483 5.6E-28 T 23-04-2016 SHYC_RS09375 61a3fcbc8b0d59b7a0c24c82c5fb19c7 484 SUPERFAMILY SSF56801 4 483 3.01E-108 T 23-04-2016 SHYC_RS09375 61a3fcbc8b0d59b7a0c24c82c5fb19c7 484 Pfam PF00501 AMP-binding enzyme 13 385 1.5E-68 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHYC_RS09375 61a3fcbc8b0d59b7a0c24c82c5fb19c7 484 PANTHER PTHR24095 1 472 3.1E-138 T 23-04-2016 SHYC_RS10005 16da899ffdc44a307300e6c206e4d907 302 SUPERFAMILY SSF51430 7 299 5.24E-68 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS10005 16da899ffdc44a307300e6c206e4d907 302 PANTHER PTHR11732:SF10 1 302 4.0E-121 T 23-04-2016 SHYC_RS10005 16da899ffdc44a307300e6c206e4d907 302 PANTHER PTHR11732 1 302 4.0E-121 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SHYC_RS10005 16da899ffdc44a307300e6c206e4d907 302 Gene3D G3DSA:3.20.20.100 6 298 3.6E-62 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS10005 16da899ffdc44a307300e6c206e4d907 302 PRINTS PR00069 Aldo-keto reductase signature 143 160 5.6E-9 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS10005 16da899ffdc44a307300e6c206e4d907 302 PRINTS PR00069 Aldo-keto reductase signature 112 130 5.6E-9 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS10005 16da899ffdc44a307300e6c206e4d907 302 Pfam PF00248 Aldo/keto reductase family 16 292 2.2E-55 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS02985 bc1a1a0d85cfb67d081a8788669ab2bd 340 Pfam PF04055 Radical SAM superfamily 18 182 1.1E-27 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS02985 bc1a1a0d85cfb67d081a8788669ab2bd 340 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 340 1.2E-121 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02985 bc1a1a0d85cfb67d081a8788669ab2bd 340 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 23-04-2016 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02985 bc1a1a0d85cfb67d081a8788669ab2bd 340 SUPERFAMILY SSF102114 6 300 1.2E-80 T 23-04-2016 SHYC_RS02985 bc1a1a0d85cfb67d081a8788669ab2bd 340 Hamap MF_01225_B Cyclic pyranopterin monophosphate synthase [moaA]. 5 340 41.549 T 23-04-2016 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02985 bc1a1a0d85cfb67d081a8788669ab2bd 340 SMART SM00729 14 222 3.1E-7 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHYC_RS02985 bc1a1a0d85cfb67d081a8788669ab2bd 340 Gene3D G3DSA:3.20.20.70 4 312 6.4E-83 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS02985 bc1a1a0d85cfb67d081a8788669ab2bd 340 Pfam PF06463 Molybdenum Cofactor Synthesis C 190 317 2.4E-36 T 23-04-2016 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.18|MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02985 bc1a1a0d85cfb67d081a8788669ab2bd 340 PANTHER PTHR22960 5 281 2.0E-126 T 23-04-2016 SHYC_RS02985 bc1a1a0d85cfb67d081a8788669ab2bd 340 Pfam PF13353 4Fe-4S single cluster domain 22 128 8.3E-9 T 23-04-2016 SHYC_RS08890 daa3051dce48ae8e36cc72123ae2047e 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 20 267 9.5E-87 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SHYC_RS08890 daa3051dce48ae8e36cc72123ae2047e 272 PANTHER PTHR11941:SF20 1 265 4.4E-187 T 23-04-2016 SHYC_RS08890 daa3051dce48ae8e36cc72123ae2047e 272 SUPERFAMILY SSF52096 5 268 5.12E-78 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS08890 daa3051dce48ae8e36cc72123ae2047e 272 PANTHER PTHR11941 1 265 4.4E-187 T 23-04-2016 SHYC_RS08890 daa3051dce48ae8e36cc72123ae2047e 272 Gene3D G3DSA:3.90.226.10 10 210 7.2E-68 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS08890 daa3051dce48ae8e36cc72123ae2047e 272 TIGRFAM TIGR01929 menB: naphthoate synthase 11 268 4.7E-131 T 23-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS08890 daa3051dce48ae8e36cc72123ae2047e 272 Gene3D G3DSA:1.10.12.10 211 260 4.2E-30 T 23-04-2016 IPR014748 Crontonase, C-terminal SHYC_RS08890 daa3051dce48ae8e36cc72123ae2047e 272 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 5 271 54.883 T 23-04-2016 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS07085 6419c281b4f0cebfc89df62b53997e45 185 PANTHER PTHR38440 3 182 4.9E-52 T 23-04-2016 SHYC_RS07085 6419c281b4f0cebfc89df62b53997e45 185 Hamap MF_01575 UPF0398 protein . 2 178 33.639 T 23-04-2016 IPR010697 Protein of unknown function DUF1273 SHYC_RS07085 6419c281b4f0cebfc89df62b53997e45 185 PIRSF PIRSF021290 2 180 5.7E-69 T 23-04-2016 IPR010697 Protein of unknown function DUF1273 SHYC_RS07085 6419c281b4f0cebfc89df62b53997e45 185 Pfam PF06908 Protein of unknown function (DUF1273) 5 172 1.1E-67 T 23-04-2016 IPR010697 Protein of unknown function DUF1273 SHYC_RS07085 6419c281b4f0cebfc89df62b53997e45 185 Gene3D G3DSA:3.40.50.450 3 180 2.0E-64 T 23-04-2016 SHYC_RS07085 6419c281b4f0cebfc89df62b53997e45 185 SUPERFAMILY SSF102405 3 177 8.15E-61 T 23-04-2016 SHYC_RS00090 1558fb7e503108396b6c5005a363c40d 93 PANTHER PTHR40137 1 93 4.5E-33 T 23-04-2016 SHYC_RS00090 1558fb7e503108396b6c5005a363c40d 93 Pfam PF05121 Gas vesicle protein K 9 93 2.4E-34 T 23-04-2016 IPR007805 Gas vesicle protein GvpK GO:0031412 SHYC_RS00090 1558fb7e503108396b6c5005a363c40d 93 PANTHER PTHR40137:SF2 1 93 4.5E-33 T 23-04-2016 SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 1 240 24.928 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 106 8.7E-14 T 23-04-2016 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 SUPERFAMILY SSF55347 109 213 4.8E-30 T 23-04-2016 SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 109 239 1.4E-38 T 23-04-2016 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 PANTHER PTHR20836 1 240 5.3E-59 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 Gene3D G3DSA:3.40.50.720 2 113 1.5E-9 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 SUPERFAMILY SSF51735 213 238 1.69E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 SUPERFAMILY SSF51735 2 107 1.69E-20 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 Gene3D G3DSA:3.30.360.10 114 210 3.2E-33 T 23-04-2016 SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 49 238 5.2E-52 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 PIRSF PIRSF000161 1 240 3.1E-72 T 23-04-2016 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07290 b2cfa44bb7f1407718e617219fc0097c 240 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 130 147 - T 23-04-2016 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 Pfam PF00122 E1-E2 ATPase 194 416 9.0E-64 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 427 433 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 139 722 1.0E-175 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00943 Copper-transporting ATPase signature 408 423 7.0E-24 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00943 Copper-transporting ATPase signature 193 212 7.0E-24 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00943 Copper-transporting ATPase signature 596 613 7.0E-24 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00943 Copper-transporting ATPase signature 142 161 7.0E-24 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00943 Copper-transporting ATPase signature 346 360 7.0E-24 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00943 Copper-transporting ATPase signature 18 32 7.0E-24 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00943 Copper-transporting ATPase signature 47 67 7.0E-24 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 196 707 1.8E-90 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 SUPERFAMILY SSF56784 423 443 3.18E-54 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 SUPERFAMILY SSF56784 478 719 3.18E-54 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00942 Copper-transporting ATPase 1 signature 26 47 8.9E-10 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00942 Copper-transporting ATPase 1 signature 140 165 8.9E-10 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00942 Copper-transporting ATPase 1 signature 120 140 8.9E-10 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 619 638 2.0E-22 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 566 576 2.0E-22 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 654 2.0E-22 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 273 287 2.0E-22 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 425 439 2.0E-22 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PANTHER PTHR24093 1 726 1.6E-242 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 SUPERFAMILY SSF55008 1 74 3.53E-19 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 SUPERFAMILY SSF81665 324 417 1.83E-12 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 SUPERFAMILY SSF81653 229 323 9.02E-23 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 Pfam PF00702 haloacid dehalogenase-like hydrolase 421 632 8.5E-40 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 Gene3D G3DSA:3.30.70.100 2 83 1.7E-22 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 Gene3D G3DSA:2.70.150.10 156 323 7.2E-29 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 PANTHER PTHR24093:SF50 1 726 1.6E-242 T 23-04-2016 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 157 721 7.9E-181 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 Pfam PF00403 Heavy-metal-associated domain 5 66 1.9E-14 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 Gene3D G3DSA:3.40.50.1000 548 687 4.7E-49 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 Gene3D G3DSA:3.40.50.1000 396 441 4.7E-49 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03775 e4a12173eb899f1fa9f86df02bd29800 726 Gene3D G3DSA:3.40.1110.10 450 547 2.5E-10 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SHYC_RS11360 c5b77dcefe27148af636b5ba3c51d1d3 310 Gene3D G3DSA:1.10.3720.10 90 304 3.5E-18 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS11360 c5b77dcefe27148af636b5ba3c51d1d3 310 PANTHER PTHR30465 1 308 1.7E-110 T 23-04-2016 SHYC_RS11360 c5b77dcefe27148af636b5ba3c51d1d3 310 PANTHER PTHR30465:SF24 1 308 1.7E-110 T 23-04-2016 SHYC_RS11360 c5b77dcefe27148af636b5ba3c51d1d3 310 SUPERFAMILY SSF161098 94 293 1.57E-16 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS11360 c5b77dcefe27148af636b5ba3c51d1d3 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 307 3.1E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS11300 9de0093139f8e87bc14b8ff80f6eafe4 285 Gene3D G3DSA:3.40.50.620 3 174 5.5E-75 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS11300 9de0093139f8e87bc14b8ff80f6eafe4 285 Pfam PF02569 Pantoate-beta-alanine ligase 3 279 2.5E-98 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SHYC_RS11300 9de0093139f8e87bc14b8ff80f6eafe4 285 PANTHER PTHR21299 1 280 3.7E-127 T 23-04-2016 SHYC_RS11300 9de0093139f8e87bc14b8ff80f6eafe4 285 SUPERFAMILY SSF52374 3 280 2.09E-101 T 23-04-2016 SHYC_RS11300 9de0093139f8e87bc14b8ff80f6eafe4 285 Hamap MF_00158 Pantothenate synthetase [panC]. 3 280 37.587 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SHYC_RS11300 9de0093139f8e87bc14b8ff80f6eafe4 285 Gene3D G3DSA:3.30.1300.10 176 281 8.7E-26 T 23-04-2016 SHYC_RS11300 9de0093139f8e87bc14b8ff80f6eafe4 285 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 280 3.0E-105 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SHYC_RS11300 9de0093139f8e87bc14b8ff80f6eafe4 285 PANTHER PTHR21299:SF1 1 280 3.7E-127 T 23-04-2016 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1|UniPathway: UPA00028 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 SUPERFAMILY SSF50249 2 136 1.2E-47 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 2.0E-66 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 Pfam PF00164 Ribosomal protein S12/S23 2 136 1.2E-38 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 PIRSF PIRSF002133 1 137 1.1E-47 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 39.532 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 PANTHER PTHR11652 1 129 3.2E-69 T 23-04-2016 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 Gene3D G3DSA:2.40.50.140 1 136 1.1E-61 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 PRINTS PR01034 Ribosomal protein S12 signature 123 135 1.2E-56 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 PRINTS PR01034 Ribosomal protein S12 signature 90 107 1.2E-56 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 PRINTS PR01034 Ribosomal protein S12 signature 71 90 1.2E-56 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 PRINTS PR01034 Ribosomal protein S12 signature 107 123 1.2E-56 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 PRINTS PR01034 Ribosomal protein S12 signature 40 55 1.2E-56 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SHYC_RS10645 56cb2d7e3f1645414ee8f091a299dc1d 137 PRINTS PR01034 Ribosomal protein S12 signature 55 70 1.2E-56 T 23-04-2016 IPR005679 Ribosomal protein S12, bacteria GO:0003735|GO:0006412|GO:0015935 SHYC_RS08125 7e3df626d6a6941c16c53472ae9b35d8 310 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 303 35.4 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS08125 7e3df626d6a6941c16c53472ae9b35d8 310 Pfam PF00551 Formyl transferase 3 179 3.8E-41 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS08125 7e3df626d6a6941c16c53472ae9b35d8 310 Gene3D G3DSA:3.10.25.10 207 302 3.7E-31 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS08125 7e3df626d6a6941c16c53472ae9b35d8 310 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 304 4.8E-105 T 23-04-2016 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS08125 7e3df626d6a6941c16c53472ae9b35d8 310 SUPERFAMILY SSF53328 3 201 2.88E-64 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS08125 7e3df626d6a6941c16c53472ae9b35d8 310 Pfam PF02911 Formyl transferase, C-terminal domain 203 300 6.6E-28 T 23-04-2016 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS08125 7e3df626d6a6941c16c53472ae9b35d8 310 Gene3D G3DSA:3.40.50.170 3 204 3.0E-67 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS08125 7e3df626d6a6941c16c53472ae9b35d8 310 SUPERFAMILY SSF50486 204 302 5.02E-29 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SHYC_RS08125 7e3df626d6a6941c16c53472ae9b35d8 310 PANTHER PTHR11138 3 300 3.5E-114 T 23-04-2016 SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 499 6.7E-131 T 23-04-2016 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 Pfam PF00854 POT family 98 470 2.3E-72 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 SUPERFAMILY SSF103473 15 211 3.66E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 SUPERFAMILY SSF103473 280 497 3.66E-33 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 Gene3D G3DSA:1.20.1250.20 29 212 6.7E-16 T 23-04-2016 SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 Gene3D G3DSA:1.20.1250.20 293 493 4.3E-5 T 23-04-2016 SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 159 171 - T 23-04-2016 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 PANTHER PTHR11654 274 499 5.5E-145 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 PANTHER PTHR11654 1 233 5.5E-145 T 23-04-2016 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 PANTHER PTHR11654:SF119 274 499 5.5E-145 T 23-04-2016 SHYC_RS09835 01274303f7259adac9c1eb45d9b754ef 503 PANTHER PTHR11654:SF119 1 233 5.5E-145 T 23-04-2016 SHYC_RS10770 ba990286bd214235345e7f41eb50ffa5 153 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 148 5.8E-57 T 23-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 SHYC_RS10770 ba990286bd214235345e7f41eb50ffa5 153 PANTHER PTHR40028:SF1 1 153 3.8E-73 T 23-04-2016 SHYC_RS10770 ba990286bd214235345e7f41eb50ffa5 153 PIRSF PIRSF010607 1 153 2.1E-65 T 23-04-2016 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355|GO:0006950 SHYC_RS10770 ba990286bd214235345e7f41eb50ffa5 153 PANTHER PTHR40028 1 153 3.8E-73 T 23-04-2016 SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 Pfam PF00005 ABC transporter 268 419 1.7E-17 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 Pfam PF00005 ABC transporter 17 167 3.0E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 SMART SM00382 276 468 5.1E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 SMART SM00382 26 215 2.6E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 SUPERFAMILY SSF52540 2 226 1.31E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 PANTHER PTHR24220 3 375 4.5E-181 T 23-04-2016 SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 SUPERFAMILY SSF52540 261 470 1.81E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 PANTHER PTHR24220:SF416 3 375 4.5E-181 T 23-04-2016 SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 Gene3D G3DSA:3.40.50.300 262 481 4.1E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 Gene3D G3DSA:3.40.50.300 1 234 2.0E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01180 01137e923891f964e268030ac1ccd547 498 ProSitePatterns PS00211 ABC transporters family signature. 392 406 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS07840 bbe21f7d39de0aa7c0c24e30324d667e 95 Gene3D G3DSA:3.30.1230.10 2 83 2.9E-27 T 23-04-2016 IPR007393 Domain of unknown function DUF448 SHYC_RS07840 bbe21f7d39de0aa7c0c24e30324d667e 95 SUPERFAMILY SSF64376 4 90 7.72E-23 T 23-04-2016 IPR007393 Domain of unknown function DUF448 SHYC_RS07840 bbe21f7d39de0aa7c0c24e30324d667e 95 PANTHER PTHR34215:SF1 1 93 3.1E-28 T 23-04-2016 SHYC_RS07840 bbe21f7d39de0aa7c0c24e30324d667e 95 Pfam PF04296 Protein of unknown function (DUF448) 9 83 3.0E-22 T 23-04-2016 IPR007393 Domain of unknown function DUF448 SHYC_RS07840 bbe21f7d39de0aa7c0c24e30324d667e 95 PANTHER PTHR34215 1 93 3.1E-28 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 4.3E-41 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PRINTS PR00702 Acriflavin resistance protein family signature 366 389 4.3E-41 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PRINTS PR00702 Acriflavin resistance protein family signature 502 525 4.3E-41 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 4.3E-41 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PRINTS PR00702 Acriflavin resistance protein family signature 477 500 4.3E-41 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PRINTS PR00702 Acriflavin resistance protein family signature 421 445 4.3E-41 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PRINTS PR00702 Acriflavin resistance protein family signature 393 414 4.3E-41 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PANTHER PTHR32063 3 247 0.0 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PANTHER PTHR32063 287 1049 0.0 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 Gene3D G3DSA:1.20.1640.10 335 538 9.5E-53 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PANTHER PTHR32063:SF0 3 247 0.0 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 SUPERFAMILY SSF82693 43 130 1.41E-14 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 Gene3D G3DSA:3.30.2090.10 182 303 1.5E-7 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 Gene3D G3DSA:3.30.2090.10 737 824 2.3E-8 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 SUPERFAMILY SSF82866 327 529 1.19E-40 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 SUPERFAMILY SSF82714 183 246 6.8E-7 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 Gene3D G3DSA:1.10.3850.10 830 1041 4.4E-53 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 Gene3D G3DSA:3.30.70.1430 43 138 1.7E-19 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 Gene3D G3DSA:3.30.70.1320 307 334 2.3E-8 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 Gene3D G3DSA:3.30.70.1320 139 178 2.3E-8 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 SUPERFAMILY SSF82693 136 181 3.14E-10 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 SUPERFAMILY SSF82693 305 347 3.14E-10 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 Pfam PF00873 AcrB/AcrD/AcrF family 6 1039 2.3E-190 T 23-04-2016 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 SUPERFAMILY SSF82866 820 1042 1.57E-44 T 23-04-2016 SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 SUPERFAMILY SSF82714 737 820 4.32E-9 T 23-04-2016 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains SHYC_RS03015 c318d4802d517c473066b8b772588c20 1054 PANTHER PTHR32063:SF0 287 1049 0.0 T 23-04-2016 SHYC_RS01375 606b0adba33daa7209ccfc23ca89fee1 183 Pfam PF00857 Isochorismatase family 7 179 3.7E-38 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHYC_RS01375 606b0adba33daa7209ccfc23ca89fee1 183 Gene3D G3DSA:3.40.50.850 2 182 1.8E-48 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHYC_RS01375 606b0adba33daa7209ccfc23ca89fee1 183 SUPERFAMILY SSF52499 2 182 9.81E-45 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHYC_RS01375 606b0adba33daa7209ccfc23ca89fee1 183 PANTHER PTHR11080:SF37 1 182 1.2E-54 T 23-04-2016 SHYC_RS01375 606b0adba33daa7209ccfc23ca89fee1 183 PANTHER PTHR11080 1 182 1.2E-54 T 23-04-2016 SHYC_RS10565 9d8536e86869896695799257b832ca4d 225 PANTHER PTHR12993:SF15 1 224 7.7E-117 T 23-04-2016 SHYC_RS10565 9d8536e86869896695799257b832ca4d 225 Gene3D G3DSA:3.40.50.10320 2 220 2.1E-52 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain SHYC_RS10565 9d8536e86869896695799257b832ca4d 225 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 136 4.5E-27 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SHYC_RS10565 9d8536e86869896695799257b832ca4d 225 SUPERFAMILY SSF102588 4 195 5.89E-49 T 23-04-2016 IPR024078 Putative deacetylase LmbE-like domain SHYC_RS10565 9d8536e86869896695799257b832ca4d 225 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 5 224 2.2E-99 T 23-04-2016 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 SHYC_RS10565 9d8536e86869896695799257b832ca4d 225 PANTHER PTHR12993 1 224 7.7E-117 T 23-04-2016 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 SUPERFAMILY SSF53474 618 756 6.73E-16 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 SUPERFAMILY SSF53474 792 914 6.73E-16 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 SUPERFAMILY SSF52777 241 478 7.89E-31 T 23-04-2016 SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 PANTHER PTHR24095:SF137 65 478 8.8E-25 T 23-04-2016 SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 Pfam PF08415 Nonribosomal peptide synthase 372 423 4.7E-9 T 23-04-2016 IPR013624 Non-ribosomal peptide synthetase SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 Pfam PF00668 Condensation domain 66 349 1.7E-32 T 23-04-2016 IPR001242 Condensation domain SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 Gene3D G3DSA:3.40.50.1820 618 729 4.3E-20 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 Gene3D G3DSA:3.40.50.1820 855 915 4.3E-20 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 PANTHER PTHR24095 65 478 8.8E-25 T 23-04-2016 SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 Pfam PF00975 Thioesterase domain 628 808 7.5E-7 T 23-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 SUPERFAMILY SSF52777 65 249 1.45E-9 T 23-04-2016 SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 ProSitePatterns PS00012 Phosphopantetheine attachment site. 544 559 - T 23-04-2016 IPR006162 Phosphopantetheine attachment site SHYC_RS00275 7d9147285423bb4c3c763ab4c38803d7 923 Gene3D G3DSA:1.10.1200.10 517 598 2.2E-8 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS08375 093187e8096c744dd8b87b225efac10b 269 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 180 190 - T 23-04-2016 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS08375 093187e8096c744dd8b87b225efac10b 269 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 254 3.6E-81 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS08375 093187e8096c744dd8b87b225efac10b 269 SUPERFAMILY SSF53681 109 261 2.09E-34 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS08375 093187e8096c744dd8b87b225efac10b 269 Hamap MF_00258 Glutamate racemase [murI]. 3 256 38.528 T 23-04-2016 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS08375 093187e8096c744dd8b87b225efac10b 269 SUPERFAMILY SSF53681 4 106 3.92E-37 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS08375 093187e8096c744dd8b87b225efac10b 269 PANTHER PTHR21198 1 265 7.5E-113 T 23-04-2016 SHYC_RS08375 093187e8096c744dd8b87b225efac10b 269 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 215 1.9E-37 T 23-04-2016 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS08375 093187e8096c744dd8b87b225efac10b 269 Gene3D G3DSA:3.40.50.1860 2 169 4.0E-56 T 23-04-2016 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS08375 093187e8096c744dd8b87b225efac10b 269 PANTHER PTHR21198:SF2 1 265 7.5E-113 T 23-04-2016 SHYC_RS08375 093187e8096c744dd8b87b225efac10b 269 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 23-04-2016 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 SMART SM00421 145 202 5.4E-26 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 Pfam PF00072 Response regulator receiver domain 4 117 6.0E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 SUPERFAMILY SSF46894 140 208 7.48E-23 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 5.8E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 5.8E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 5.8E-15 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 PANTHER PTHR26402:SF151 2 206 2.6E-68 T 23-04-2016 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 202 1.3E-22 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 PANTHER PTHR26402 2 206 2.6E-68 T 23-04-2016 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 Gene3D G3DSA:3.40.50.2300 1 150 6.0E-37 T 23-04-2016 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 SMART SM00448 2 117 3.0E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 Gene3D G3DSA:1.10.10.10 151 208 1.8E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS04645 fca2b2cfb64bc496efaba43af5104217 208 SUPERFAMILY SSF52172 1 129 2.28E-32 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS10450 5ac4875a3e9c3e395aeb856cc7fef661 329 PANTHER PTHR23406:SF3 211 329 2.6E-52 T 23-04-2016 SHYC_RS10450 5ac4875a3e9c3e395aeb856cc7fef661 329 PIRSF PIRSF000428 1 329 1.4E-110 T 23-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SHYC_RS10450 5ac4875a3e9c3e395aeb856cc7fef661 329 Pfam PF01515 Phosphate acetyl/butaryl transferase 4 324 1.4E-119 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SHYC_RS10450 5ac4875a3e9c3e395aeb856cc7fef661 329 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 324 5.2E-116 T 23-04-2016 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SHYC_RS10450 5ac4875a3e9c3e395aeb856cc7fef661 329 SUPERFAMILY SSF53659 5 327 9.87E-89 T 23-04-2016 SHYC_RS10450 5ac4875a3e9c3e395aeb856cc7fef661 329 PANTHER PTHR23406 211 329 2.6E-52 T 23-04-2016 SHYC_RS10450 5ac4875a3e9c3e395aeb856cc7fef661 329 Gene3D G3DSA:3.40.50.10750 136 300 1.1E-67 T 23-04-2016 SHYC_RS11190 07b4722125d6e52e4656e85e54fd8adc 445 PANTHER PTHR11559:SF142 2 434 9.5E-88 T 23-04-2016 SHYC_RS11190 07b4722125d6e52e4656e85e54fd8adc 445 SUPERFAMILY SSF53474 3 434 2.11E-87 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS11190 07b4722125d6e52e4656e85e54fd8adc 445 PANTHER PTHR11559 2 434 9.5E-88 T 23-04-2016 SHYC_RS11190 07b4722125d6e52e4656e85e54fd8adc 445 Pfam PF00135 Carboxylesterase family 319 434 7.5E-5 T 23-04-2016 IPR002018 Carboxylesterase, type B SHYC_RS11190 07b4722125d6e52e4656e85e54fd8adc 445 Pfam PF00135 Carboxylesterase family 4 229 1.0E-74 T 23-04-2016 IPR002018 Carboxylesterase, type B SHYC_RS11190 07b4722125d6e52e4656e85e54fd8adc 445 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 81 91 - T 23-04-2016 IPR019819 Carboxylesterase type B, conserved site SHYC_RS11190 07b4722125d6e52e4656e85e54fd8adc 445 Gene3D G3DSA:3.40.50.1820 3 434 4.3E-97 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS09315 5dba568cb45b7213f1201bb46b01c452 125 Gene3D G3DSA:3.10.129.10 3 121 1.2E-41 T 23-04-2016 IPR029069 HotDog domain SHYC_RS09315 5dba568cb45b7213f1201bb46b01c452 125 SUPERFAMILY SSF54637 3 122 2.24E-28 T 23-04-2016 IPR029069 HotDog domain SHYC_RS09315 5dba568cb45b7213f1201bb46b01c452 125 PANTHER PTHR12418:SF33 1 120 2.5E-36 T 23-04-2016 SHYC_RS09315 5dba568cb45b7213f1201bb46b01c452 125 Pfam PF03061 Thioesterase superfamily 34 111 2.2E-15 T 23-04-2016 IPR006683 Thioesterase domain SHYC_RS09315 5dba568cb45b7213f1201bb46b01c452 125 PANTHER PTHR12418 1 120 2.5E-36 T 23-04-2016 SHYC_RS09315 5dba568cb45b7213f1201bb46b01c452 125 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 4 119 5.9E-32 T 23-04-2016 IPR003736 Phenylacetic acid degradation-related domain SHYC_RS01760 7ed5dadb8f7c2c0bf7919ad712d0437e 395 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 21 387 1.1E-123 T 23-04-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 SHYC_RS01760 7ed5dadb8f7c2c0bf7919ad712d0437e 395 SUPERFAMILY SSF53756 141 356 1.76E-17 T 23-04-2016 SHYC_RS01760 7ed5dadb8f7c2c0bf7919ad712d0437e 395 PANTHER PTHR37316 22 392 1.5E-55 T 23-04-2016 SHYC_RS03120 bf1ca2b4376bde3b0211221849cae124 179 PIRSF PIRSF002161 1 179 4.2E-71 T 23-04-2016 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03120 bf1ca2b4376bde3b0211221849cae124 179 PANTHER PTHR11994 2 178 9.9E-98 T 23-04-2016 SHYC_RS03120 bf1ca2b4376bde3b0211221849cae124 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 23-04-2016 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03120 bf1ca2b4376bde3b0211221849cae124 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.891 T 23-04-2016 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03120 bf1ca2b4376bde3b0211221849cae124 179 Pfam PF00281 Ribosomal protein L5 24 80 3.1E-28 T 23-04-2016 IPR031310 Ribosomal protein L5, N-terminal SHYC_RS03120 bf1ca2b4376bde3b0211221849cae124 179 SUPERFAMILY SSF55282 3 178 4.47E-78 T 23-04-2016 IPR022803 Ribosomal protein L5 domain SHYC_RS03120 bf1ca2b4376bde3b0211221849cae124 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 2.5E-42 T 23-04-2016 IPR031309 Ribosomal protein L5, C-terminal SHYC_RS03120 bf1ca2b4376bde3b0211221849cae124 179 Gene3D G3DSA:3.30.1440.10 2 179 3.7E-81 T 23-04-2016 IPR022803 Ribosomal protein L5 domain SHYC_RS11005 76599ebc89adbe789f7c5c4f5606fdf7 296 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 21 287 6.4E-80 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SHYC_RS11005 76599ebc89adbe789f7c5c4f5606fdf7 296 SUPERFAMILY SSF53335 18 291 2.57E-71 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS11005 76599ebc89adbe789f7c5c4f5606fdf7 296 Gene3D G3DSA:3.40.50.150 6 212 7.1E-70 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS11005 76599ebc89adbe789f7c5c4f5606fdf7 296 Gene3D G3DSA:1.10.8.100 217 289 2.6E-23 T 23-04-2016 IPR023165 rRNA adenine dimethylase-like SHYC_RS11005 76599ebc89adbe789f7c5c4f5606fdf7 296 SMART SM00650 37 213 4.5E-79 T 23-04-2016 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 SHYC_RS11005 76599ebc89adbe789f7c5c4f5606fdf7 296 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 21 289 53.191 T 23-04-2016 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 SHYC_RS11005 76599ebc89adbe789f7c5c4f5606fdf7 296 PANTHER PTHR11727 11 292 7.2E-91 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SHYC_RS11005 76599ebc89adbe789f7c5c4f5606fdf7 296 Pfam PF00398 Ribosomal RNA adenine dimethylase 21 281 3.9E-67 T 23-04-2016 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm SHYC_RS11005 76599ebc89adbe789f7c5c4f5606fdf7 296 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 53 80 - T 23-04-2016 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 SHYC_RS01655 e5d75c1e242606a119b8fdd716eb7bc1 220 PANTHER PTHR10889 1 219 5.2E-104 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SHYC_RS01655 e5d75c1e242606a119b8fdd716eb7bc1 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 37.163 T 23-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SHYC_RS01655 e5d75c1e242606a119b8fdd716eb7bc1 220 PIRSF PIRSF001357 2 219 3.8E-76 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SHYC_RS01655 e5d75c1e242606a119b8fdd716eb7bc1 220 SUPERFAMILY SSF51569 2 214 1.15E-82 T 23-04-2016 SHYC_RS01655 e5d75c1e242606a119b8fdd716eb7bc1 220 Pfam PF01791 DeoC/LacD family aldolase 6 209 3.4E-18 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SHYC_RS01655 e5d75c1e242606a119b8fdd716eb7bc1 220 SMART SM01133 2 213 8.8E-100 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SHYC_RS01655 e5d75c1e242606a119b8fdd716eb7bc1 220 PANTHER PTHR10889:SF1 1 219 5.2E-104 T 23-04-2016 SHYC_RS01655 e5d75c1e242606a119b8fdd716eb7bc1 220 Gene3D G3DSA:3.20.20.70 2 215 4.3E-93 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS01655 e5d75c1e242606a119b8fdd716eb7bc1 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 4 212 1.1E-87 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SHYC_RS00725 e5d75c1e242606a119b8fdd716eb7bc1 220 PANTHER PTHR10889 1 219 5.2E-104 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SHYC_RS00725 e5d75c1e242606a119b8fdd716eb7bc1 220 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 215 37.163 T 23-04-2016 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SHYC_RS00725 e5d75c1e242606a119b8fdd716eb7bc1 220 PIRSF PIRSF001357 2 219 3.8E-76 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SHYC_RS00725 e5d75c1e242606a119b8fdd716eb7bc1 220 SUPERFAMILY SSF51569 2 214 1.15E-82 T 23-04-2016 SHYC_RS00725 e5d75c1e242606a119b8fdd716eb7bc1 220 Pfam PF01791 DeoC/LacD family aldolase 6 209 3.4E-18 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SHYC_RS00725 e5d75c1e242606a119b8fdd716eb7bc1 220 SMART SM01133 2 213 8.8E-100 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SHYC_RS00725 e5d75c1e242606a119b8fdd716eb7bc1 220 PANTHER PTHR10889:SF1 1 219 5.2E-104 T 23-04-2016 SHYC_RS00725 e5d75c1e242606a119b8fdd716eb7bc1 220 Gene3D G3DSA:3.20.20.70 2 215 4.3E-93 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS00725 e5d75c1e242606a119b8fdd716eb7bc1 220 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 4 212 1.1E-87 T 23-04-2016 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|UniPathway: UPA00002 SHYC_RS01195 dfb5d0e0471fe0a36acb06d73ebbdf18 154 Gene3D G3DSA:3.30.1060.10 1 148 1.0E-38 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS01195 dfb5d0e0471fe0a36acb06d73ebbdf18 154 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 23.657 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS01195 dfb5d0e0471fe0a36acb06d73ebbdf18 154 SUPERFAMILY SSF55068 1 147 3.79E-42 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS01195 dfb5d0e0471fe0a36acb06d73ebbdf18 154 PANTHER PTHR10173 1 145 6.5E-39 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SHYC_RS01195 dfb5d0e0471fe0a36acb06d73ebbdf18 154 PANTHER PTHR10173:SF34 1 145 6.5E-39 T 23-04-2016 SHYC_RS01195 dfb5d0e0471fe0a36acb06d73ebbdf18 154 Pfam PF01625 Peptide methionine sulfoxide reductase 3 146 1.2E-36 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS01990 81fba4d8f593c0b54e3609e98760afa2 531 Pfam PF04650 YSIRK type signal peptide 14 36 4.9E-6 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS01990 81fba4d8f593c0b54e3609e98760afa2 531 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 10 46 2.9E-8 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS08165 7a872234f06fb261698cc01729e254c0 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 130 1.2E-36 T 23-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase SHYC_RS08165 7a872234f06fb261698cc01729e254c0 137 SUPERFAMILY SSF54593 2 132 6.39E-31 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS08165 7a872234f06fb261698cc01729e254c0 137 PANTHER PTHR33990 3 133 1.6E-53 T 23-04-2016 SHYC_RS08165 7a872234f06fb261698cc01729e254c0 137 PANTHER PTHR33990:SF4 3 133 1.6E-53 T 23-04-2016 SHYC_RS08165 7a872234f06fb261698cc01729e254c0 137 PIRSF PIRSF021700 1 136 6.7E-38 T 23-04-2016 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase SHYC_RS08165 7a872234f06fb261698cc01729e254c0 137 Gene3D G3DSA:3.10.180.10 3 134 1.5E-41 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS02225 cbc6d0d4eb93094a48b1e43e907345e5 391 PANTHER PTHR23531 1 391 2.7E-94 T 23-04-2016 SHYC_RS02225 cbc6d0d4eb93094a48b1e43e907345e5 391 Gene3D G3DSA:1.20.1250.20 213 382 5.8E-18 T 23-04-2016 SHYC_RS02225 cbc6d0d4eb93094a48b1e43e907345e5 391 Gene3D G3DSA:1.20.1250.20 9 186 2.0E-26 T 23-04-2016 SHYC_RS02225 cbc6d0d4eb93094a48b1e43e907345e5 391 PANTHER PTHR23531:SF1 1 391 2.7E-94 T 23-04-2016 SHYC_RS02225 cbc6d0d4eb93094a48b1e43e907345e5 391 SUPERFAMILY SSF103473 9 386 3.92E-49 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS02225 cbc6d0d4eb93094a48b1e43e907345e5 391 Pfam PF07690 Major Facilitator Superfamily 15 292 3.0E-36 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 SUPERFAMILY SSF53649 306 504 2.86E-72 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 SUPERFAMILY SSF53649 4 77 2.86E-72 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 Gene3D G3DSA:3.40.1450.10 78 305 3.5E-90 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 PIRSF PIRSF001492 1 506 6.7E-199 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 4 504 4.2E-206 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 SUPERFAMILY SSF64158 77 304 1.7E-81 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 Pfam PF01676 Metalloenzyme superfamily 4 493 4.8E-75 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 294 4.3E-80 T 23-04-2016 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 Gene3D G3DSA:3.40.720.10 4 77 9.4E-93 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 Gene3D G3DSA:3.40.720.10 310 505 9.4E-93 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 PANTHER PTHR31637 3 506 1.2E-255 T 23-04-2016 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 PANTHER PTHR31637:SF0 3 506 1.2E-255 T 23-04-2016 SHYC_RS09560 0ce9004047ffc78eb28487e597973b23 506 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 505 48.34 T 23-04-2016 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00109 SHYC_RS08085 1590b18e0dad6da2b2d1ae4a5111fa0f 211 PANTHER PTHR41299:SF1 4 211 4.3E-45 T 23-04-2016 SHYC_RS08085 1590b18e0dad6da2b2d1ae4a5111fa0f 211 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 146 203 5.1E-13 T 23-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SHYC_RS08085 1590b18e0dad6da2b2d1ae4a5111fa0f 211 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 27 126 3.5E-19 T 23-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SHYC_RS08085 1590b18e0dad6da2b2d1ae4a5111fa0f 211 Gene3D G3DSA:2.60.120.320 126 208 9.5E-11 T 23-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SHYC_RS08085 1590b18e0dad6da2b2d1ae4a5111fa0f 211 SMART SM00983 140 204 3.6E-15 T 23-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SHYC_RS08085 1590b18e0dad6da2b2d1ae4a5111fa0f 211 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 8 205 2.2E-56 T 23-04-2016 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SHYC_RS08085 1590b18e0dad6da2b2d1ae4a5111fa0f 211 Gene3D G3DSA:3.40.50.10240 22 125 7.9E-22 T 23-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SHYC_RS08085 1590b18e0dad6da2b2d1ae4a5111fa0f 211 SUPERFAMILY SSF63999 14 126 4.32E-29 T 23-04-2016 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356 SHYC_RS08085 1590b18e0dad6da2b2d1ae4a5111fa0f 211 PANTHER PTHR41299 4 211 4.3E-45 T 23-04-2016 SHYC_RS08085 1590b18e0dad6da2b2d1ae4a5111fa0f 211 SUPERFAMILY SSF63862 131 210 7.32E-11 T 23-04-2016 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|UniPathway: UPA00060 SHYC_RS03285 ce2c6c3beb01ff53b4f36f71f5533c44 575 TIGRFAM TIGR00394 lac_pts_IIC: PTS system, lactose-specific IIC component 11 421 1.9E-219 T 23-04-2016 IPR004801 Phosphotransferase system, lactose-specific IIC component GO:0008982|GO:0016021|GO:0022869 SHYC_RS03285 ce2c6c3beb01ff53b4f36f71f5533c44 575 Gene3D G3DSA:3.40.50.270 472 574 1.5E-22 T 23-04-2016 SHYC_RS03285 ce2c6c3beb01ff53b4f36f71f5533c44 575 Pfam PF02378 Phosphotransferase system, EIIC 28 348 4.2E-69 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS03285 ce2c6c3beb01ff53b4f36f71f5533c44 575 SUPERFAMILY SSF52794 474 574 7.06E-18 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHYC_RS03285 ce2c6c3beb01ff53b4f36f71f5533c44 575 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 475 551 4.6E-10 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHYC_RS03285 ce2c6c3beb01ff53b4f36f71f5533c44 575 PANTHER PTHR33989:SF6 1 441 6.4E-245 T 23-04-2016 SHYC_RS03285 ce2c6c3beb01ff53b4f36f71f5533c44 575 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 424 569 3.0E-52 T 23-04-2016 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 SHYC_RS03285 ce2c6c3beb01ff53b4f36f71f5533c44 575 PANTHER PTHR33989 1 441 6.4E-245 T 23-04-2016 SHYC_RS03285 ce2c6c3beb01ff53b4f36f71f5533c44 575 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 421 6.5E-76 T 23-04-2016 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 Pfam PF00186 Dihydrofolate reductase 3 157 9.9E-54 T 23-04-2016 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 23-04-2016 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 PIRSF PIRSF000194 1 158 1.1E-46 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 PANTHER PTHR22778:SF16 1 158 6.3E-34 T 23-04-2016 SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 SUPERFAMILY SSF53597 2 158 1.3E-48 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 PANTHER PTHR22778 1 158 6.3E-34 T 23-04-2016 SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 Gene3D G3DSA:3.40.430.10 2 158 3.8E-51 T 23-04-2016 IPR024072 Dihydrofolate reductase-like domain SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 PRINTS PR00070 Dihydrofolate reductase signature 89 103 5.7E-11 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 PRINTS PR00070 Dihydrofolate reductase signature 28 36 5.7E-11 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 PRINTS PR00070 Dihydrofolate reductase signature 41 52 5.7E-11 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SHYC_RS07145 a5cce646448b07275c24e34f80121a79 158 PRINTS PR00070 Dihydrofolate reductase signature 14 24 5.7E-11 T 23-04-2016 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|UniPathway: UPA00077 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 876 176.168 T 23-04-2016 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 2.9E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 2.9E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 2.9E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 2.9E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 2.9E-31 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 SUPERFAMILY SSF101353 246 442 3.27E-67 T 23-04-2016 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 SUPERFAMILY SSF55186 553 719 6.15E-53 T 23-04-2016 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 PANTHER PTHR11777:SF9 1 875 0.0 T 23-04-2016 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 SUPERFAMILY SSF55681 5 245 3.98E-86 T 23-04-2016 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 654 697 4.3E-20 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 PANTHER PTHR11777 1 875 0.0 T 23-04-2016 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 Pfam PF01411 tRNA synthetases class II (A) 8 555 1.9E-203 T 23-04-2016 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 SMART SM00863 654 697 1.7E-23 T 23-04-2016 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 856 0.0 T 23-04-2016 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7|Reactome: REACT_71 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 SUPERFAMILY SSF50447 455 553 7.42E-15 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 Pfam PF02272 DHHA1 domain 802 870 1.1E-18 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SHYC_RS06275 9cdc08adc7beb3f8b5dde35ced00b05c 876 Gene3D G3DSA:3.30.930.10 4 241 1.7E-94 T 23-04-2016 SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 PRINTS PR01800 Staphylococcus aureus exotoxin signature 169 185 1.3E-19 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 1.3E-19 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 PRINTS PR01800 Staphylococcus aureus exotoxin signature 209 224 1.3E-19 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 PRINTS PR01800 Staphylococcus aureus exotoxin signature 131 142 1.3E-19 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 Gene3D G3DSA:2.40.50.110 67 133 2.5E-20 T 23-04-2016 SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 PRINTS PR01898 Bacterial superantigen superfamily signature 129 142 3.7E-15 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 PRINTS PR01898 Bacterial superantigen superfamily signature 183 197 3.7E-15 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 PRINTS PR01898 Bacterial superantigen superfamily signature 170 183 3.7E-15 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 PRINTS PR01898 Bacterial superantigen superfamily signature 100 126 3.7E-15 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 PRINTS PR01898 Bacterial superantigen superfamily signature 224 240 3.7E-15 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 Gene3D G3DSA:3.10.20.120 134 242 4.1E-35 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 170 193 - T 23-04-2016 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 163 218 3.9E-6 T 23-04-2016 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 SUPERFAMILY SSF54334 159 241 4.84E-24 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 60 140 3.5E-17 T 23-04-2016 IPR015282 Staphylococcal superantigen-like OB-fold domain SHYC_RS00490 02eac779fbd99cf7b85154f25c86271a 244 SUPERFAMILY SSF50203 54 141 6.1E-19 T 23-04-2016 IPR008992 Enterotoxin GO:0009405 SHYC_RS04140 97498b1f5b4c8202ca03c9e1fe1c5285 307 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 2 307 43.539 T 23-04-2016 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1 SHYC_RS04140 97498b1f5b4c8202ca03c9e1fe1c5285 307 PANTHER PTHR12112:SF17 3 307 1.6E-113 T 23-04-2016 SHYC_RS04140 97498b1f5b4c8202ca03c9e1fe1c5285 307 Pfam PF01368 DHH family 3 145 5.6E-28 T 23-04-2016 IPR001667 DDH domain SHYC_RS04140 97498b1f5b4c8202ca03c9e1fe1c5285 307 Gene3D G3DSA:3.90.1640.10 2 186 2.3E-61 T 23-04-2016 SHYC_RS04140 97498b1f5b4c8202ca03c9e1fe1c5285 307 SMART SM01131 180 306 4.4E-57 T 23-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 SHYC_RS04140 97498b1f5b4c8202ca03c9e1fe1c5285 307 PANTHER PTHR12112 3 307 1.6E-113 T 23-04-2016 SHYC_RS04140 97498b1f5b4c8202ca03c9e1fe1c5285 307 Pfam PF02833 DHHA2 domain 182 305 7.0E-18 T 23-04-2016 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1 SHYC_RS04140 97498b1f5b4c8202ca03c9e1fe1c5285 307 SUPERFAMILY SSF64182 2 306 5.23E-79 T 23-04-2016 SHYC_RS00970 af6c13a6dc52b761e533ebf08217036d 281 SUPERFAMILY SSF56784 3 239 5.3E-17 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS00970 af6c13a6dc52b761e533ebf08217036d 281 Gene3D G3DSA:3.40.50.1000 145 237 1.4E-7 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS00970 af6c13a6dc52b761e533ebf08217036d 281 Pfam PF13419 Haloacid dehalogenase-like hydrolase 132 231 4.6E-7 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS06695 e87a2453b2c919de6311b20dc048df71 449 PANTHER PTHR11773 1 441 2.4E-237 T 23-04-2016 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SHYC_RS06695 e87a2453b2c919de6311b20dc048df71 449 Gene3D G3DSA:3.40.640.10 84 338 5.4E-25 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS06695 e87a2453b2c919de6311b20dc048df71 449 PANTHER PTHR11773:SF2 1 441 2.4E-237 T 23-04-2016 SHYC_RS06695 e87a2453b2c919de6311b20dc048df71 449 SUPERFAMILY SSF53383 3 441 1.54E-112 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS06695 e87a2453b2c919de6311b20dc048df71 449 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 48.032 T 23-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 SHYC_RS06695 e87a2453b2c919de6311b20dc048df71 449 PIRSF PIRSF006815 3 447 9.8E-178 T 23-04-2016 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 SHYC_RS06695 e87a2453b2c919de6311b20dc048df71 449 Pfam PF02347 Glycine cleavage system P-protein 3 440 3.5E-152 T 23-04-2016 IPR020580 Glycine cleavage system P-protein, N-terminal GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2 SHYC_RS01220 276cb2eb32c98b73f0fa28eb402bf828 475 SUPERFAMILY SSF53720 6 471 6.41E-159 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHYC_RS01220 276cb2eb32c98b73f0fa28eb402bf828 475 Pfam PF00171 Aldehyde dehydrogenase family 16 468 1.9E-163 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS01220 276cb2eb32c98b73f0fa28eb402bf828 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 273 284 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS01220 276cb2eb32c98b73f0fa28eb402bf828 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS01220 276cb2eb32c98b73f0fa28eb402bf828 475 PANTHER PTHR11699:SF49 8 469 5.4E-218 T 23-04-2016 SHYC_RS01220 276cb2eb32c98b73f0fa28eb402bf828 475 PANTHER PTHR11699 8 469 5.4E-218 T 23-04-2016 SHYC_RS01220 276cb2eb32c98b73f0fa28eb402bf828 475 PIRSF PIRSF036492 15 471 2.2E-84 T 23-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 SHYC_RS01220 276cb2eb32c98b73f0fa28eb402bf828 475 Gene3D G3DSA:3.40.605.10 6 258 1.3E-93 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS01220 276cb2eb32c98b73f0fa28eb402bf828 475 Gene3D G3DSA:3.40.309.10 259 444 1.1E-66 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHYC_RS03380 67548fa6d56b7c85498be729d60ffe27 354 Hamap MF_02040 Iron-sulfur cluster carrier protein. 102 349 33.895 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SHYC_RS03380 67548fa6d56b7c85498be729d60ffe27 354 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 112 348 1.6E-87 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SHYC_RS03380 67548fa6d56b7c85498be729d60ffe27 354 SUPERFAMILY SSF52540 113 351 3.02E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03380 67548fa6d56b7c85498be729d60ffe27 354 Gene3D G3DSA:3.40.50.300 109 348 7.1E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03380 67548fa6d56b7c85498be729d60ffe27 354 PANTHER PTHR23264 1 351 2.8E-133 T 23-04-2016 IPR019591 Mrp/NBP35 ATP-binding protein SHYC_RS03380 67548fa6d56b7c85498be729d60ffe27 354 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 23-04-2016 IPR000808 Mrp, conserved site GO:0005524 SHYC_RS03380 67548fa6d56b7c85498be729d60ffe27 354 PANTHER PTHR23264:SF19 1 351 2.8E-133 T 23-04-2016 SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 SUPERFAMILY SSF55821 2 199 9.16E-74 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 2 391 49.853 T 23-04-2016 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275|UniPathway: UPA00275 SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 Pfam PF00925 GTP cyclohydrolase II 207 369 4.7E-67 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 9 197 1.8E-74 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 PANTHER PTHR21327 1 393 7.2E-202 T 23-04-2016 SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 208 393 2.7E-71 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 PANTHER PTHR21327:SF6 1 393 7.2E-202 T 23-04-2016 SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 SUPERFAMILY SSF142695 203 371 7.72E-62 T 23-04-2016 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 Gene3D G3DSA:3.90.870.10 1 209 1.5E-83 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 3 197 2.6E-66 T 23-04-2016 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 PIRSF PIRSF001259 1 393 4.4E-149 T 23-04-2016 SHYC_RS05600 fed6f39ffed39c9e44c6e87e2af2d086 393 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 203 393 35.759 T 23-04-2016 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|UniPathway: UPA00275 SHYC_RS11695 f9a10878553eb765cad6882f3d6ba015 171 SUPERFAMILY SSF101874 2 167 3.01E-45 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHYC_RS11695 f9a10878553eb765cad6882f3d6ba015 171 SMART SM00867 3 168 1.1E-55 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHYC_RS11695 f9a10878553eb765cad6882f3d6ba015 171 PANTHER PTHR34406:SF1 2 167 7.3E-52 T 23-04-2016 SHYC_RS11695 f9a10878553eb765cad6882f3d6ba015 171 Gene3D G3DSA:2.40.128.110 3 168 1.1E-48 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHYC_RS11695 f9a10878553eb765cad6882f3d6ba015 171 Pfam PF04264 YceI-like domain 4 167 3.0E-38 T 23-04-2016 IPR007372 Lipid/polyisoprenoid-binding, YceI-like SHYC_RS11695 f9a10878553eb765cad6882f3d6ba015 171 PANTHER PTHR34406 2 167 7.3E-52 T 23-04-2016 SHYC_RS01965 92ae9ceccfd79d2135b81febb5c513bb 224 SUPERFAMILY SSF53955 146 222 1.0E-13 T 23-04-2016 IPR023346 Lysozyme-like domain SHYC_RS01965 92ae9ceccfd79d2135b81febb5c513bb 224 Pfam PF06737 Transglycosylase-like domain 145 224 2.4E-18 T 23-04-2016 IPR010618 Transglycosylase-like SHYC_RS01965 92ae9ceccfd79d2135b81febb5c513bb 224 Gene3D G3DSA:1.10.530.10 126 223 2.8E-14 T 23-04-2016 SHYC_RS09675 9095a55f987e8d8d38d069874ecad37d 311 Gene3D G3DSA:3.40.50.300 132 304 6.2E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09675 9095a55f987e8d8d38d069874ecad37d 311 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 1 304 40.616 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SHYC_RS09675 9095a55f987e8d8d38d069874ecad37d 311 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 3 300 7.5E-115 T 23-04-2016 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 SHYC_RS09675 9095a55f987e8d8d38d069874ecad37d 311 SUPERFAMILY SSF75138 2 128 3.01E-36 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SHYC_RS09675 9095a55f987e8d8d38d069874ecad37d 311 Pfam PF02603 HPr Serine kinase N terminus 3 125 6.2E-37 T 23-04-2016 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SHYC_RS09675 9095a55f987e8d8d38d069874ecad37d 311 Gene3D G3DSA:3.40.1390.20 2 129 1.6E-43 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SHYC_RS09675 9095a55f987e8d8d38d069874ecad37d 311 PANTHER PTHR30305:SF1 1 308 1.1E-144 T 23-04-2016 SHYC_RS09675 9095a55f987e8d8d38d069874ecad37d 311 SUPERFAMILY SSF53795 131 297 1.19E-39 T 23-04-2016 SHYC_RS09675 9095a55f987e8d8d38d069874ecad37d 311 Pfam PF07475 HPr Serine kinase C-terminal domain 128 296 3.0E-75 T 23-04-2016 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 SHYC_RS09675 9095a55f987e8d8d38d069874ecad37d 311 PANTHER PTHR30305 1 308 1.1E-144 T 23-04-2016 SHYC_RS08320 c26dcfd08917585f8f8843cd03dcc422 149 Pfam PF00583 Acetyltransferase (GNAT) family 64 105 7.7E-5 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS08320 c26dcfd08917585f8f8843cd03dcc422 149 Hamap MF_00824 Uncharacterized N-acetyltransferase . 1 146 38.427 T 23-04-2016 IPR017274 Putative N-acetyltransferase YlbP SHYC_RS08320 c26dcfd08917585f8f8843cd03dcc422 149 PIRSF PIRSF037732 1 149 3.2E-48 T 23-04-2016 IPR017274 Putative N-acetyltransferase YlbP SHYC_RS08320 c26dcfd08917585f8f8843cd03dcc422 149 SUPERFAMILY SSF55729 36 136 1.37E-10 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08320 c26dcfd08917585f8f8843cd03dcc422 149 Gene3D G3DSA:3.40.630.30 10 144 1.2E-23 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS04130 97a549e2c91f432cdfd71042fb7c23a4 461 Gene3D G3DSA:3.40.605.10 7 223 2.8E-56 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS04130 97a549e2c91f432cdfd71042fb7c23a4 461 SUPERFAMILY SSF53720 6 441 5.24E-120 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHYC_RS04130 97a549e2c91f432cdfd71042fb7c23a4 461 PANTHER PTHR11699 8 458 3.2E-167 T 23-04-2016 SHYC_RS04130 97a549e2c91f432cdfd71042fb7c23a4 461 Pfam PF00171 Aldehyde dehydrogenase family 6 427 3.8E-94 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS04130 97a549e2c91f432cdfd71042fb7c23a4 461 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 208 215 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS04130 97a549e2c91f432cdfd71042fb7c23a4 461 Gene3D G3DSA:3.40.309.10 224 409 4.6E-61 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHYC_RS04130 97a549e2c91f432cdfd71042fb7c23a4 461 PIRSF PIRSF036492 2 461 4.9E-183 T 23-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 SUPERFAMILY SSF51430 5 271 1.83E-88 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 127 144 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 231 246 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 Pfam PF00248 Aldo/keto reductase family 21 263 1.9E-50 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 Gene3D G3DSA:3.20.20.100 4 274 5.0E-105 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 PANTHER PTHR11732 1 278 7.6E-139 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 PRINTS PR00069 Aldo-keto reductase signature 161 190 1.1E-47 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 PRINTS PR00069 Aldo-keto reductase signature 35 59 1.1E-47 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 PRINTS PR00069 Aldo-keto reductase signature 95 113 1.1E-47 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 PRINTS PR00069 Aldo-keto reductase signature 127 144 1.1E-47 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS05535 3889287ea17634b8f8f8aa377241fce6 278 PRINTS PR00069 Aldo-keto reductase signature 198 222 1.1E-47 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 PANTHER PTHR30627 170 460 5.3E-194 T 23-04-2016 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 PANTHER PTHR30627:SF2 170 460 5.3E-194 T 23-04-2016 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 PANTHER PTHR30627 6 118 5.3E-194 T 23-04-2016 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 304 1.2E-41 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 SUPERFAMILY SSF56601 320 656 5.63E-60 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 PANTHER PTHR30627 478 677 5.3E-194 T 23-04-2016 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 PANTHER PTHR30627:SF2 478 677 5.3E-194 T 23-04-2016 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 PANTHER PTHR30627:SF2 6 118 5.3E-194 T 23-04-2016 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 Gene3D G3DSA:3.90.1310.10 200 318 5.9E-29 T 23-04-2016 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 Pfam PF00905 Penicillin binding protein transpeptidase domain 351 656 1.3E-61 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 SUPERFAMILY SSF56519 188 319 1.7E-36 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 SUPERFAMILY SSF56519 63 123 1.7E-36 T 23-04-2016 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 SHYC_RS06590 3881ccce1c9e90d07c3674e812d5bb2c 678 Gene3D G3DSA:3.40.710.10 319 656 5.4E-64 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 PANTHER PTHR11938:SF75 42 479 2.2E-128 T 23-04-2016 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 Gene3D G3DSA:3.50.50.60 154 251 3.7E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 7.6E-24 T 23-04-2016 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 7.6E-24 T 23-04-2016 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 7.6E-24 T 23-04-2016 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 PRINTS PR00419 Adrenodoxin reductase family signature 293 307 7.6E-24 T 23-04-2016 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 Gene3D G3DSA:3.50.50.60 403 481 5.2E-14 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 SUPERFAMILY SSF46548 4 163 4.81E-32 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 SUPERFAMILY SSF51971 152 363 4.24E-58 T 23-04-2016 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 SUPERFAMILY SSF51971 397 414 4.24E-58 T 23-04-2016 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 Gene3D G3DSA:3.50.50.60 252 402 5.1E-31 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 SUPERFAMILY SSF51971 386 482 3.3E-8 T 23-04-2016 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 154 317 8.1E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 386 468 6.9E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 140 2.8E-22 T 23-04-2016 IPR028261 Dihydroprymidine dehydrogenase domain II SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 Gene3D G3DSA:1.10.1060.10 3 153 1.4E-36 T 23-04-2016 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 5 482 5.7E-177 T 23-04-2016 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 SHYC_RS11130 e38abe7d0f306fb4e3bc082065d98138 485 PANTHER PTHR11938 42 479 2.2E-128 T 23-04-2016 SHYC_RS02870 2bd9c133098ecaf5470d92204415be74 117 Pfam PF13564 DoxX-like family 11 99 2.0E-7 T 23-04-2016 IPR032808 DoxX family SHYC_RS07665 3da040462f335bbd072f0c9d7e58987d 343 SUPERFAMILY SSF52317 1 160 5.04E-46 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS07665 3da040462f335bbd072f0c9d7e58987d 343 PANTHER PTHR30237:SF4 1 343 6.4E-111 T 23-04-2016 SHYC_RS07665 3da040462f335bbd072f0c9d7e58987d 343 SUPERFAMILY SSF141986 193 329 1.7E-20 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain SHYC_RS07665 3da040462f335bbd072f0c9d7e58987d 343 Gene3D G3DSA:3.40.50.10740 1 160 2.3E-49 T 23-04-2016 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain SHYC_RS07665 3da040462f335bbd072f0c9d7e58987d 343 Gene3D G3DSA:3.50.30.60 201 330 1.6E-25 T 23-04-2016 IPR027461 LD-carboxypeptidase A, C-terminal domain SHYC_RS07665 3da040462f335bbd072f0c9d7e58987d 343 PANTHER PTHR30237 1 343 6.4E-111 T 23-04-2016 SHYC_RS07665 3da040462f335bbd072f0c9d7e58987d 343 Pfam PF02016 LD-carboxypeptidase 13 326 1.5E-71 T 23-04-2016 IPR003507 Peptidase family S66 SHYC_RS07665 3da040462f335bbd072f0c9d7e58987d 343 PIRSF PIRSF028757 1 341 7.5E-67 T 23-04-2016 IPR003507 Peptidase family S66 SHYC_RS03845 bebf169aa02d893dafc5e94481f2db63 159 Gene3D G3DSA:3.30.565.10 17 143 7.9E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS03845 bebf169aa02d893dafc5e94481f2db63 159 SUPERFAMILY SSF55874 35 136 5.76E-14 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS03845 bebf169aa02d893dafc5e94481f2db63 159 PANTHER PTHR35526 1 153 2.4E-58 T 23-04-2016 SHYC_RS03845 bebf169aa02d893dafc5e94481f2db63 159 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 1 154 1.4E-69 T 23-04-2016 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 SHYC_RS03845 bebf169aa02d893dafc5e94481f2db63 159 Pfam PF13581 Histidine kinase-like ATPase domain 12 142 1.7E-25 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS03845 bebf169aa02d893dafc5e94481f2db63 159 PANTHER PTHR35526:SF1 1 153 2.4E-58 T 23-04-2016 SHYC_RS01440 1793cf9d45dbd5b7d1937314b0260c04 394 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 381 2.9E-71 T 23-04-2016 IPR010645 Uncharacterised MFS-type transporter YbfB SHYC_RS01440 1793cf9d45dbd5b7d1937314b0260c04 394 PANTHER PTHR23537:SF1 8 394 2.4E-48 T 23-04-2016 SHYC_RS01440 1793cf9d45dbd5b7d1937314b0260c04 394 Gene3D G3DSA:1.20.1250.20 7 195 1.1E-17 T 23-04-2016 SHYC_RS01440 1793cf9d45dbd5b7d1937314b0260c04 394 PANTHER PTHR23537 8 394 2.4E-48 T 23-04-2016 SHYC_RS01440 1793cf9d45dbd5b7d1937314b0260c04 394 Gene3D G3DSA:1.20.1250.20 213 387 2.2E-11 T 23-04-2016 SHYC_RS01440 1793cf9d45dbd5b7d1937314b0260c04 394 SUPERFAMILY SSF103473 6 388 2.88E-38 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 Pfam PF08544 GHMP kinases C terminal 198 269 5.9E-10 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 Pfam PF00288 GHMP kinases N terminal domain 86 142 2.6E-9 T 23-04-2016 IPR006204 GHMP kinase N-terminal domain GO:0005524 SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 4 282 4.2E-87 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 Gene3D G3DSA:3.30.230.10 5 156 3.2E-53 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 PANTHER PTHR20861 1 280 1.9E-102 T 23-04-2016 SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 Hamap MF_00061 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 2 278 34.514 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 PANTHER PTHR20861:SF2 1 280 1.9E-102 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 PIRSF PIRSF010376 1 281 1.2E-94 T 23-04-2016 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 Gene3D G3DSA:3.30.70.890 161 281 5.8E-31 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 SUPERFAMILY SSF54211 1 156 3.79E-45 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS10995 d1124892206406de9d2bceeca2dcb09c 282 SUPERFAMILY SSF55060 160 280 8.27E-31 T 23-04-2016 IPR013750 GHMP kinase, C-terminal domain SHYC_RS11445 e70b17872bd5982980dff91be50cba7e 472 SUPERFAMILY SSF55604 8 81 4.45E-21 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS11445 e70b17872bd5982980dff91be50cba7e 472 PANTHER PTHR30175:SF7 1 466 4.0E-187 T 23-04-2016 SHYC_RS11445 e70b17872bd5982980dff91be50cba7e 472 Gene3D G3DSA:3.30.1360.60 5 82 1.3E-27 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS11445 e70b17872bd5982980dff91be50cba7e 472 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 31 110 6.6E-15 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS11445 e70b17872bd5982980dff91be50cba7e 472 PANTHER PTHR30175 1 466 4.0E-187 T 23-04-2016 SHYC_RS11445 e70b17872bd5982980dff91be50cba7e 472 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SHYC_RS11445 e70b17872bd5982980dff91be50cba7e 472 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 6 458 1.3E-183 T 23-04-2016 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 SHYC_RS11445 e70b17872bd5982980dff91be50cba7e 472 Pfam PF02378 Phosphotransferase system, EIIC 111 402 1.8E-37 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS11445 e70b17872bd5982980dff91be50cba7e 472 Pfam PF00367 phosphotransferase system, EIIB 10 43 2.9E-17 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 Pfam PF13377 Periplasmic binding protein-like domain 167 305 3.3E-22 T 23-04-2016 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 SMART SM00354 1 69 1.7E-28 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 Gene3D G3DSA:3.40.50.2300 170 300 1.5E-26 T 23-04-2016 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 2.2E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 2 12 2.2E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 SUPERFAMILY SSF53822 56 305 1.43E-56 T 23-04-2016 IPR028082 Periplasmic binding protein-like I SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 4.6E-16 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 Gene3D G3DSA:1.10.260.40 1 51 1.6E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 SUPERFAMILY SSF47413 2 57 3.27E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 Gene3D G3DSA:3.40.50.2300 52 169 5.4E-38 T 23-04-2016 SHYC_RS11455 8b4049fb5db68175d7a49a66eec62d98 324 PANTHER PTHR30146 1 321 1.9E-83 T 23-04-2016 SHYC_RS05540 b7c9b8d14203d09c998f9039c751dfc6 121 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 4 112 1.5E-20 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SHYC_RS05540 b7c9b8d14203d09c998f9039c751dfc6 121 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 117 16.371 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SHYC_RS05540 b7c9b8d14203d09c998f9039c751dfc6 121 PANTHER PTHR28259:SF3 1 115 6.7E-20 T 23-04-2016 SHYC_RS05540 b7c9b8d14203d09c998f9039c751dfc6 121 PANTHER PTHR28259 1 115 6.7E-20 T 23-04-2016 SHYC_RS06780 615d3b00782d53ffadeeb19df833ac95 557 SUPERFAMILY SSF52540 1 219 8.86E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06780 615d3b00782d53ffadeeb19df833ac95 557 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 554 1.0E-164 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SHYC_RS06780 615d3b00782d53ffadeeb19df833ac95 557 SUPERFAMILY SSF52540 296 508 4.11E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06780 615d3b00782d53ffadeeb19df833ac95 557 SUPERFAMILY SSF52540 3 50 4.11E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06780 615d3b00782d53ffadeeb19df833ac95 557 PANTHER PTHR11059 2 557 2.0E-155 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SHYC_RS06780 615d3b00782d53ffadeeb19df833ac95 557 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 511 1.3E-19 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SHYC_RS06780 615d3b00782d53ffadeeb19df833ac95 557 PIRSF PIRSF003128 1 557 3.7E-174 T 23-04-2016 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 SHYC_RS06780 615d3b00782d53ffadeeb19df833ac95 557 Gene3D G3DSA:3.40.50.300 1 209 1.1E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06780 615d3b00782d53ffadeeb19df833ac95 557 Gene3D G3DSA:3.40.50.300 397 509 3.3E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 PANTHER PTHR11751:SF417 12 382 5.9E-192 T 23-04-2016 SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 Pfam PF00155 Aminotransferase class I and II 29 366 3.9E-62 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 PANTHER PTHR11751 12 382 5.9E-192 T 23-04-2016 SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 SUPERFAMILY SSF53383 21 383 2.79E-107 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 Gene3D G3DSA:3.90.1150.10 269 385 3.0E-33 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 229 242 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 194 217 5.5E-11 T 23-04-2016 SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 158 182 5.5E-11 T 23-04-2016 SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 90 110 5.5E-11 T 23-04-2016 SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 112 133 5.5E-11 T 23-04-2016 SHYC_RS08885 37a42dae4be9312d6bbe7e8e5ea15eb1 392 Gene3D G3DSA:3.40.640.10 42 268 1.7E-72 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 214 371 5.7E-38 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 Gene3D G3DSA:2.40.30.10 383 476 1.6E-23 T 23-04-2016 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 Gene3D G3DSA:3.40.50.10050 512 590 3.4E-25 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 Gene3D G3DSA:2.40.30.10 613 711 7.2E-39 T 23-04-2016 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 SUPERFAMILY SSF52156 489 619 1.96E-38 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 SUPERFAMILY SSF52540 206 383 2.91E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 PANTHER PTHR23115:SF184 565 710 1.8E-209 T 23-04-2016 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 PANTHER PTHR23115:SF184 197 540 1.8E-209 T 23-04-2016 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 PANTHER PTHR23115 565 710 1.8E-209 T 23-04-2016 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 PANTHER PTHR23115 197 540 1.8E-209 T 23-04-2016 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 Gene3D G3DSA:3.40.50.300 201 371 2.8E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 ProSitePatterns PS01176 Initiation factor 2 signature. 663 685 - T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 Pfam PF11987 Translation-initiation factor 2 497 602 1.3E-36 T 23-04-2016 IPR023115 Translation initiation factor IF- 2, domain 3 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 127 710 8.3E-272 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 SUPERFAMILY SSF50447 385 467 2.99E-24 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 6.7E-14 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 134 185 1.0E-16 T 23-04-2016 IPR006847 Translation initiation factor IF-2, N-terminal SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 SUPERFAMILY SSF50447 613 710 4.57E-34 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 710 17.366 T 23-04-2016 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 SHYC_RS07830 4db324d816dc8e5035588ffc98022536 711 Pfam PF00009 Elongation factor Tu GTP binding domain 217 371 9.2E-37 T 23-04-2016 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 SMART SM00957 4 388 4.4E-260 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 ProSitePatterns PS01312 SecA family signature. 486 501 - T 23-04-2016 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 SUPERFAMILY SSF52540 402 575 3.33E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 Hamap MF_01382 Protein translocase subunit SecA [secA]. 3 784 19.23 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 Gene3D G3DSA:1.10.3060.10 605 781 1.9E-45 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 Pfam PF07516 SecA Wing and Scaffold domain 574 780 3.1E-56 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 SUPERFAMILY SSF81886 820 832 6.8E-70 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 SUPERFAMILY SSF81886 577 792 6.8E-70 T 23-04-2016 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 25 503 2.8E-240 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 Gene3D G3DSA:3.40.50.300 403 576 7.6E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 PANTHER PTHR30612 11 842 0.0 T 23-04-2016 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 Pfam PF02810 SEC-C motif 824 842 1.9E-9 T 23-04-2016 IPR004027 SEC-C motif SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 Pfam PF07517 SecA DEAD-like domain 9 388 4.6E-122 T 23-04-2016 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 Gene3D G3DSA:3.90.1440.10 234 354 3.4E-46 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 PRINTS PR00906 SecA protein signature 67 91 1.5E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 PRINTS PR00906 SecA protein signature 121 131 1.5E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 PRINTS PR00906 SecA protein signature 174 194 1.5E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 PRINTS PR00906 SecA protein signature 105 119 1.5E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 PRINTS PR00906 SecA protein signature 325 347 1.5E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 PRINTS PR00906 SecA protein signature 399 412 1.5E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 PRINTS PR00906 SecA protein signature 362 379 1.5E-70 T 23-04-2016 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 Pfam PF01043 SecA preprotein cross-linking domain 236 344 4.6E-39 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 SMART SM00958 232 344 1.7E-62 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 SUPERFAMILY SSF52540 354 401 3.08E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 SUPERFAMILY SSF52540 11 232 3.08E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 Gene3D G3DSA:3.40.50.300 355 402 2.5E-113 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 Gene3D G3DSA:3.40.50.300 9 232 2.5E-113 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09715 64cf55c1298cebff8fa8b3c1de12b98e 842 SUPERFAMILY SSF81767 231 354 8.76E-46 T 23-04-2016 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 Pfam PF07664 Ferrous iron transport protein B C terminus 454 506 4.3E-20 T 23-04-2016 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 Pfam PF07670 Nucleoside recognition 511 635 3.0E-32 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 Pfam PF07670 Nucleoside recognition 350 442 1.1E-14 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 631 1.7E-190 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 Gene3D G3DSA:3.40.50.300 3 163 4.4E-28 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 PANTHER PTHR11649:SF37 6 143 7.3E-262 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 PANTHER PTHR11649:SF37 260 663 7.3E-262 T 23-04-2016 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 PANTHER PTHR11649 6 143 7.3E-262 T 23-04-2016 SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 PANTHER PTHR11649 260 663 7.3E-262 T 23-04-2016 SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 Pfam PF02421 Ferrous iron transport protein B 5 155 2.3E-56 T 23-04-2016 IPR011619 Ferrous iron transport protein B, N-terminal GO:0005525|GO:0015093|GO:0015684|GO:0016021 SHYC_RS10225 7b9bc0629e998eb026012cee628b7ca9 664 SUPERFAMILY SSF52540 6 162 3.66E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10705 c56b48fd3e5cf4ed0a779fc8eb1c672d 175 Pfam PF05991 YacP-like NYN domain 6 169 3.1E-48 T 23-04-2016 IPR010298 Protein of unknown function DUF901 SHYC_RS10705 c56b48fd3e5cf4ed0a779fc8eb1c672d 175 PANTHER PTHR34547 1 175 4.7E-59 T 23-04-2016 SHYC_RS09160 2fd17946894dee781b437787437ec008 313 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 107 184 2.7E-26 T 23-04-2016 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SHYC_RS09160 2fd17946894dee781b437787437ec008 313 Gene3D G3DSA:3.40.47.10 160 311 5.3E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS09160 2fd17946894dee781b437787437ec008 313 PANTHER PTHR34069 1 313 5.9E-127 T 23-04-2016 SHYC_RS09160 2fd17946894dee781b437787437ec008 313 SUPERFAMILY SSF53901 3 311 1.39E-71 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS09160 2fd17946894dee781b437787437ec008 313 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 311 6.6E-125 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SHYC_RS09160 2fd17946894dee781b437787437ec008 313 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 223 311 2.8E-36 T 23-04-2016 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SHYC_RS09160 2fd17946894dee781b437787437ec008 313 Gene3D G3DSA:3.40.47.10 1 159 2.5E-60 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS09160 2fd17946894dee781b437787437ec008 313 PANTHER PTHR34069:SF2 1 313 5.9E-127 T 23-04-2016 SHYC_RS09160 2fd17946894dee781b437787437ec008 313 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 311 67.23 T 23-04-2016 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381|UniPathway: UPA00094 SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 SUPERFAMILY SSF52540 463 724 3.77E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 SMART SM00382 475 717 1.2 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 SMART SM00382 23 411 0.57 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 Gene3D G3DSA:1.10.8.280 150 235 7.3E-5 T 23-04-2016 SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 Gene3D G3DSA:3.40.50.300 450 510 1.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 Gene3D G3DSA:3.40.50.300 633 750 1.3E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 Gene3D G3DSA:3.40.50.300 2 57 1.2E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 Gene3D G3DSA:3.40.50.300 325 444 1.2E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 PANTHER PTHR32282 1 750 0.0 T 23-04-2016 SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 ProSitePatterns PS00211 ABC transporters family signature. 642 656 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 Gene3D G3DSA:1.20.1580.10 514 632 9.1E-39 T 23-04-2016 SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 Gene3D G3DSA:1.20.1580.10 254 324 5.4E-35 T 23-04-2016 SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 Gene3D G3DSA:1.20.1580.10 92 149 5.4E-35 T 23-04-2016 SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 Pfam PF00005 ABC transporter 466 671 6.2E-11 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 PANTHER PTHR32282:SF10 1 750 0.0 T 23-04-2016 SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 SUPERFAMILY SSF52540 1 151 2.8E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11155 eb825bd869799c0a603f188be9283a26 752 SUPERFAMILY SSF52540 268 416 2.8E-37 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Gene3D G3DSA:1.20.5.140 559 594 4.8E-16 T 23-04-2016 IPR023223 DNA polymerase III/inhibitor IA3, alpha-helix domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 PANTHER PTHR23044:SF26 25 550 0.0 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 416 635 5.1E-54 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Pfam PF02811 PHP domain 336 694 4.7E-51 T 23-04-2016 IPR004013 PHP domain GO:0003824 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 PANTHER PTHR23044 927 1067 0.0 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 PANTHER PTHR23044 25 550 0.0 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 PANTHER PTHR23044 1105 1410 0.0 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 PANTHER PTHR23044 824 909 0.0 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Pfam PF14480 DNA polymerase III polC-type N-terminus I 8 76 1.2E-14 T 23-04-2016 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 SMART SM00481 335 402 3.5E-24 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Pfam PF14579 Helix-hairpin-helix motif 1346 1425 1.3E-9 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 SUPERFAMILY SSF81585 1373 1421 9.15E-7 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 231 1434 0.0 T 23-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1436 425.924 T 23-04-2016 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Gene3D G3DSA:3.30.420.10 418 558 4.9E-46 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Gene3D G3DSA:1.10.150.280 1372 1420 1.5E-11 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Pfam PF11490 DNA polymerase III polC-type N-terminus II 94 207 8.2E-13 T 23-04-2016 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 823 1233 2.4E-95 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 PANTHER PTHR23044:SF26 1105 1410 0.0 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 PANTHER PTHR23044:SF26 824 909 0.0 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Pfam PF00929 Exonuclease 422 577 2.4E-43 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 SUPERFAMILY SSF53098 420 874 1.01E-96 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Gene3D G3DSA:2.40.50.140 230 322 3.8E-7 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Gene3D G3DSA:3.20.20.140 629 794 9.0E-57 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 Gene3D G3DSA:3.20.20.140 333 417 9.0E-57 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 PANTHER PTHR23044:SF26 927 1067 0.0 T 23-04-2016 SHYC_RS07855 e2f1ff4c03cc2032630447db0e6c6b08 1436 SMART SM00479 420 586 4.2E-59 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHYC_RS02280 92f4fd00aede8d4ee860713cb387eddd 336 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS02280 92f4fd00aede8d4ee860713cb387eddd 336 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 322 5.7E-27 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SHYC_RS02280 92f4fd00aede8d4ee860713cb387eddd 336 PANTHER PTHR24220:SF535 8 335 8.0E-157 T 23-04-2016 SHYC_RS02280 92f4fd00aede8d4ee860713cb387eddd 336 SUPERFAMILY SSF52540 6 256 6.29E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02280 92f4fd00aede8d4ee860713cb387eddd 336 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 302 9.4E-22 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SHYC_RS02280 92f4fd00aede8d4ee860713cb387eddd 336 SMART SM00382 35 243 6.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS02280 92f4fd00aede8d4ee860713cb387eddd 336 Gene3D G3DSA:3.40.50.300 6 259 3.3E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02280 92f4fd00aede8d4ee860713cb387eddd 336 Pfam PF00005 ABC transporter 27 185 2.7E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS02280 92f4fd00aede8d4ee860713cb387eddd 336 PANTHER PTHR24220 8 335 8.0E-157 T 23-04-2016 SHYC_RS02725 ac2dee576375623538ffc8b616bd7944 320 PANTHER PTHR10361 1 301 2.4E-93 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SHYC_RS02725 ac2dee576375623538ffc8b616bd7944 320 Pfam PF01758 Sodium Bile acid symporter family 41 217 1.9E-43 T 23-04-2016 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 SHYC_RS06460 f8b544b64d651d4f340d1495d0bec74f 448 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 423 4.3E-148 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SHYC_RS06460 f8b544b64d651d4f340d1495d0bec74f 448 SUPERFAMILY SSF102114 121 364 4.19E-55 T 23-04-2016 SHYC_RS06460 f8b544b64d651d4f340d1495d0bec74f 448 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 419 1.2E-142 T 23-04-2016 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 SHYC_RS06460 f8b544b64d651d4f340d1495d0bec74f 448 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 3.4E-26 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SHYC_RS06460 f8b544b64d651d4f340d1495d0bec74f 448 PANTHER PTHR11918 1 445 7.9E-156 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SHYC_RS06460 f8b544b64d651d4f340d1495d0bec74f 448 PANTHER PTHR11918:SF45 1 445 7.9E-156 T 23-04-2016 SHYC_RS06460 f8b544b64d651d4f340d1495d0bec74f 448 SMART SM00729 143 360 4.0E-53 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHYC_RS06460 f8b544b64d651d4f340d1495d0bec74f 448 Gene3D G3DSA:3.80.30.20 141 367 3.6E-74 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHYC_RS06460 f8b544b64d651d4f340d1495d0bec74f 448 Pfam PF04055 Radical SAM superfamily 149 318 2.0E-26 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS06460 f8b544b64d651d4f340d1495d0bec74f 448 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SHYC_RS06355 1a84bf4188fd2aea05fe707e5b1ddade 174 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 7 169 6.7E-50 T 23-04-2016 IPR010021 HAD-superfamily phosphatase, YqeG-like SHYC_RS06355 1a84bf4188fd2aea05fe707e5b1ddade 174 PANTHER PTHR19288:SF25 3 164 2.4E-41 T 23-04-2016 SHYC_RS06355 1a84bf4188fd2aea05fe707e5b1ddade 174 Pfam PF13419 Haloacid dehalogenase-like hydrolase 22 139 4.5E-12 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS06355 1a84bf4188fd2aea05fe707e5b1ddade 174 SUPERFAMILY SSF56784 6 149 4.54E-24 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS06355 1a84bf4188fd2aea05fe707e5b1ddade 174 PANTHER PTHR19288 3 164 2.4E-41 T 23-04-2016 SHYC_RS06355 1a84bf4188fd2aea05fe707e5b1ddade 174 Gene3D G3DSA:3.40.50.1000 25 146 3.3E-23 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS06355 1a84bf4188fd2aea05fe707e5b1ddade 174 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 31 141 1.9E-20 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SHYC_RS09045 09c85d2613379bc15231ad21a43ef6ba 368 Pfam PF01594 Domain of unknown function DUF20 29 344 3.0E-63 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like SHYC_RS09045 09c85d2613379bc15231ad21a43ef6ba 368 PANTHER PTHR21716 22 346 3.2E-77 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like SHYC_RS09045 09c85d2613379bc15231ad21a43ef6ba 368 PANTHER PTHR21716:SF10 22 346 3.2E-77 T 23-04-2016 SHYC_RS07110 c6d123c2d7ce4407db97e96677c3c9b2 294 SMART SM00279 178 213 4.3E-15 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SHYC_RS07110 c6d123c2d7ce4407db97e96677c3c9b2 294 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 5 175 1.2E-48 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SHYC_RS07110 c6d123c2d7ce4407db97e96677c3c9b2 294 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 177 264 5.7E-27 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SHYC_RS07110 c6d123c2d7ce4407db97e96677c3c9b2 294 PANTHER PTHR10133:SF37 1 265 7.6E-128 T 23-04-2016 SHYC_RS07110 c6d123c2d7ce4407db97e96677c3c9b2 294 PANTHER PTHR10133 1 265 7.6E-128 T 23-04-2016 SHYC_RS07110 c6d123c2d7ce4407db97e96677c3c9b2 294 Gene3D G3DSA:1.10.150.20 191 250 4.4E-25 T 23-04-2016 SHYC_RS07110 c6d123c2d7ce4407db97e96677c3c9b2 294 SUPERFAMILY SSF47807 176 276 9.42E-27 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SHYC_RS07110 c6d123c2d7ce4407db97e96677c3c9b2 294 Gene3D G3DSA:3.40.50.1010 4 190 2.6E-57 T 23-04-2016 IPR029060 PIN domain-like SHYC_RS07110 c6d123c2d7ce4407db97e96677c3c9b2 294 SUPERFAMILY SSF88723 3 158 6.87E-46 T 23-04-2016 IPR029060 PIN domain-like SHYC_RS07110 c6d123c2d7ce4407db97e96677c3c9b2 294 SMART SM00475 2 266 3.5E-104 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 30.612 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 237 54.955 T 23-04-2016 IPR026562 Probable transcriptional regulatory protein YeeN SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 Gene3D G3DSA:3.30.1270.10 210 236 8.9E-34 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 Gene3D G3DSA:3.30.1270.10 80 131 8.9E-34 T 23-04-2016 IPR026563 Transcriptional regulator TACO1-like, domain 2 SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 PANTHER PTHR12532:SF4 1 237 7.2E-151 T 23-04-2016 SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 Gene3D G3DSA:3.30.70.980 132 203 6.2E-19 T 23-04-2016 IPR026564 Transcriptional regulator TACO1-like, domain 3 SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 PANTHER PTHR12532 1 237 7.2E-151 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 SUPERFAMILY SSF75625 1 236 4.97E-82 T 23-04-2016 IPR029072 YebC-like SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 1.2E-69 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 Gene3D G3DSA:1.10.10.200 1 78 6.9E-30 T 23-04-2016 IPR017856 Integrase, N-terminal zinc-binding domain-like SHYC_RS10105 3d9c4b22dd5a646a18b9140509ed3650 237 Pfam PF01709 Transcriptional regulator 4 235 3.8E-79 T 23-04-2016 IPR002876 Transcriptional regulator TACO1-like SHYC_RS06260 ac14fcd81b5022bbcf5fcfa21ee25a4b 370 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 7 356 1.1E-136 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SHYC_RS06260 ac14fcd81b5022bbcf5fcfa21ee25a4b 370 PANTHER PTHR11933:SF10 2 370 2.5E-212 T 23-04-2016 SHYC_RS06260 ac14fcd81b5022bbcf5fcfa21ee25a4b 370 Pfam PF03054 tRNA methyl transferase 7 356 6.6E-146 T 23-04-2016 SHYC_RS06260 ac14fcd81b5022bbcf5fcfa21ee25a4b 370 Gene3D G3DSA:2.40.30.10 278 366 2.9E-29 T 23-04-2016 SHYC_RS06260 ac14fcd81b5022bbcf5fcfa21ee25a4b 370 SUPERFAMILY SSF52402 5 243 3.97E-58 T 23-04-2016 SHYC_RS06260 ac14fcd81b5022bbcf5fcfa21ee25a4b 370 PANTHER PTHR11933 2 370 2.5E-212 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SHYC_RS06260 ac14fcd81b5022bbcf5fcfa21ee25a4b 370 Gene3D G3DSA:3.40.50.620 3 211 1.1E-102 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS06260 ac14fcd81b5022bbcf5fcfa21ee25a4b 370 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 6 357 40.063 T 23-04-2016 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 SHYC_RS06260 ac14fcd81b5022bbcf5fcfa21ee25a4b 370 Gene3D G3DSA:2.30.30.280 213 276 4.4E-28 T 23-04-2016 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 SHYC_RS10495 a2b08767febfeea3f9c6586b647f7962 220 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 2 207 4.0E-80 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SHYC_RS10495 a2b08767febfeea3f9c6586b647f7962 220 SMART SM00986 44 203 1.1E-37 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like SHYC_RS10495 a2b08767febfeea3f9c6586b647f7962 220 PANTHER PTHR11264 1 213 4.8E-121 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SHYC_RS10495 a2b08767febfeea3f9c6586b647f7962 220 SMART SM00987 44 203 1.1E-37 T 23-04-2016 SHYC_RS10495 a2b08767febfeea3f9c6586b647f7962 220 Gene3D G3DSA:3.40.470.10 2 214 1.4E-93 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like SHYC_RS10495 a2b08767febfeea3f9c6586b647f7962 220 SUPERFAMILY SSF52141 2 213 1.02E-87 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like SHYC_RS10495 a2b08767febfeea3f9c6586b647f7962 220 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 52 61 - T 23-04-2016 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 SHYC_RS10495 a2b08767febfeea3f9c6586b647f7962 220 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 214 38.218 T 23-04-2016 IPR002043 Uracil-DNA glycosylase GO:0004844|GO:0006281|GO:0006284 SHYC_RS10495 a2b08767febfeea3f9c6586b647f7962 220 Pfam PF03167 Uracil DNA glycosylase superfamily 49 202 4.5E-26 T 23-04-2016 IPR005122 Uracil-DNA glycosylase-like SHYC_RS06655 98edacb70d740a42eb38321f22e555b8 324 SUPERFAMILY SSF52540 3 282 4.38E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06655 98edacb70d740a42eb38321f22e555b8 324 PANTHER PTHR30258 4 299 1.1E-79 T 23-04-2016 SHYC_RS06655 98edacb70d740a42eb38321f22e555b8 324 Pfam PF00437 Type II/IV secretion system protein 14 265 4.6E-52 T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SHYC_RS06655 98edacb70d740a42eb38321f22e555b8 324 Gene3D G3DSA:3.40.50.300 117 282 3.6E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06655 98edacb70d740a42eb38321f22e555b8 324 Gene3D G3DSA:3.30.450.90 4 104 8.8E-24 T 23-04-2016 SHYC_RS06655 98edacb70d740a42eb38321f22e555b8 324 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 195 209 - T 23-04-2016 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 SHYC_RS02265 ecc4f209ee6328c5069e62b05914ac1a 749 SUPERFAMILY SSF51998 7 749 7.32E-287 T 23-04-2016 SHYC_RS02265 ecc4f209ee6328c5069e62b05914ac1a 749 Gene3D G3DSA:3.20.70.20 6 749 0.0 T 23-04-2016 SHYC_RS02265 ecc4f209ee6328c5069e62b05914ac1a 749 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 749 0.0 T 23-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SHYC_RS02265 ecc4f209ee6328c5069e62b05914ac1a 749 Pfam PF01228 Glycine radical 624 730 1.2E-43 T 23-04-2016 IPR001150 Glycine radical domain GO:0003824|GO:0008152 SHYC_RS02265 ecc4f209ee6328c5069e62b05914ac1a 749 PANTHER PTHR30191 1 749 0.0 T 23-04-2016 SHYC_RS02265 ecc4f209ee6328c5069e62b05914ac1a 749 Pfam PF02901 Pyruvate formate lyase-like 23 608 6.3E-207 T 23-04-2016 IPR004184 Pyruvate formate lyase domain GO:0003824 SHYC_RS02265 ecc4f209ee6328c5069e62b05914ac1a 749 PANTHER PTHR30191:SF0 1 749 0.0 T 23-04-2016 SHYC_RS02265 ecc4f209ee6328c5069e62b05914ac1a 749 PIRSF PIRSF000379 8 749 0.0 T 23-04-2016 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493|UniPathway: UPA00920 SHYC_RS02265 ecc4f209ee6328c5069e62b05914ac1a 749 ProSitePatterns PS00850 Glycine radical domain signature. 719 727 - T 23-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SHYC_RS01815 3c745f97398b551ed50b5d30f54dd72b 228 Pfam PF00005 ABC transporter 21 169 6.8E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS01815 3c745f97398b551ed50b5d30f54dd72b 228 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS01815 3c745f97398b551ed50b5d30f54dd72b 228 SMART SM00382 30 218 1.1E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS01815 3c745f97398b551ed50b5d30f54dd72b 228 PANTHER PTHR24220 3 223 7.7E-105 T 23-04-2016 SHYC_RS01815 3c745f97398b551ed50b5d30f54dd72b 228 SUPERFAMILY SSF52540 1 222 1.21E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01815 3c745f97398b551ed50b5d30f54dd72b 228 Gene3D G3DSA:3.40.50.300 1 222 3.9E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01815 3c745f97398b551ed50b5d30f54dd72b 228 PANTHER PTHR24220:SF578 3 223 7.7E-105 T 23-04-2016 SHYC_RS01795 1f6592811c0ba88c5e7b72c06538c808 289 Gene3D G3DSA:3.90.1200.10 94 261 6.3E-13 T 23-04-2016 SHYC_RS01795 1f6592811c0ba88c5e7b72c06538c808 289 Pfam PF03881 Fructosamine kinase 14 284 2.0E-72 T 23-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase SHYC_RS01795 1f6592811c0ba88c5e7b72c06538c808 289 SUPERFAMILY SSF56112 10 280 5.1E-42 T 23-04-2016 IPR011009 Protein kinase-like domain SHYC_RS01795 1f6592811c0ba88c5e7b72c06538c808 289 PANTHER PTHR12149:SF8 1 289 5.5E-83 T 23-04-2016 SHYC_RS01795 1f6592811c0ba88c5e7b72c06538c808 289 Gene3D G3DSA:3.30.200.20 3 78 1.6E-4 T 23-04-2016 SHYC_RS01795 1f6592811c0ba88c5e7b72c06538c808 289 PIRSF PIRSF006221 2 288 1.1E-82 T 23-04-2016 IPR016477 Fructosamine/Ketosamine-3-kinase SHYC_RS01795 1f6592811c0ba88c5e7b72c06538c808 289 PANTHER PTHR12149 1 289 5.5E-83 T 23-04-2016 SHYC_RS10320 f60320f92c9c27edc198596c5473782a 141 PANTHER PTHR33932:SF4 1 141 8.6E-34 T 23-04-2016 SHYC_RS10320 f60320f92c9c27edc198596c5473782a 141 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 131 3.8E-33 T 23-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein SHYC_RS10320 f60320f92c9c27edc198596c5473782a 141 PANTHER PTHR33932 1 141 8.6E-34 T 23-04-2016 SHYC_RS04420 b6a4a9ffdbe16da76bb06158ae573584 433 PANTHER PTHR11986:SF73 1 433 2.5E-303 T 23-04-2016 SHYC_RS04420 b6a4a9ffdbe16da76bb06158ae573584 433 PANTHER PTHR11986 1 433 2.5E-303 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS04420 b6a4a9ffdbe16da76bb06158ae573584 433 Gene3D G3DSA:3.40.640.10 73 320 1.0E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS04420 b6a4a9ffdbe16da76bb06158ae573584 433 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 92.474 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS04420 b6a4a9ffdbe16da76bb06158ae573584 433 SUPERFAMILY SSF53383 1 428 1.06E-124 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS04420 b6a4a9ffdbe16da76bb06158ae573584 433 Gene3D G3DSA:3.90.1150.10 322 427 2.5E-42 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS04420 b6a4a9ffdbe16da76bb06158ae573584 433 Gene3D G3DSA:3.90.1150.10 2 72 2.5E-42 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS04420 b6a4a9ffdbe16da76bb06158ae573584 433 Pfam PF00202 Aminotransferase class-III 36 399 3.3E-74 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS04420 b6a4a9ffdbe16da76bb06158ae573584 433 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 7 427 2.7E-170 T 23-04-2016 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188|UniPathway: UPA00251 SHYC_RS04420 b6a4a9ffdbe16da76bb06158ae573584 433 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS08435 d2adc830eed007290fdd375e8aa042cd 354 PANTHER PTHR11538 95 345 2.5E-111 T 23-04-2016 SHYC_RS08435 d2adc830eed007290fdd375e8aa042cd 354 Pfam PF01409 tRNA synthetases class II core domain (F) 95 343 7.1E-108 T 23-04-2016 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 SHYC_RS08435 d2adc830eed007290fdd375e8aa042cd 354 Gene3D G3DSA:3.30.930.10 12 344 1.5E-133 T 23-04-2016 SHYC_RS08435 d2adc830eed007290fdd375e8aa042cd 354 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 23 90 3.6E-24 T 23-04-2016 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SHYC_RS08435 d2adc830eed007290fdd375e8aa042cd 354 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 11 343 48.528 T 23-04-2016 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 SHYC_RS08435 d2adc830eed007290fdd375e8aa042cd 354 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 42 344 8.0E-113 T 23-04-2016 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SHYC_RS08435 d2adc830eed007290fdd375e8aa042cd 354 SUPERFAMILY SSF55681 95 344 2.84E-79 T 23-04-2016 SHYC_RS08435 d2adc830eed007290fdd375e8aa042cd 354 SUPERFAMILY SSF46589 15 102 1.2E-21 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SHYC_RS00070 1283f5d31e267bc678279454ca6f2284 255 PANTHER PTHR36852 6 253 2.9E-30 T 23-04-2016 SHYC_RS00070 1283f5d31e267bc678279454ca6f2284 255 Pfam PF06386 Gas vesicle synthesis protein GvpL/GvpF 8 247 4.3E-54 T 23-04-2016 IPR009430 Gas vesicle protein GvpL/GvpF GO:0031411|GO:0031412 SHYC_RS06710 e0dffe7c2689fa72b4fa741bd66c86be 276 PANTHER PTHR12561:SF7 148 276 2.3E-100 T 23-04-2016 SHYC_RS06710 e0dffe7c2689fa72b4fa741bd66c86be 276 PANTHER PTHR12561:SF7 3 128 2.3E-100 T 23-04-2016 SHYC_RS06710 e0dffe7c2689fa72b4fa741bd66c86be 276 Pfam PF03099 Biotin/lipoate A/B protein ligase family 53 188 6.0E-27 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SHYC_RS06710 e0dffe7c2689fa72b4fa741bd66c86be 276 SUPERFAMILY SSF55681 4 276 1.82E-63 T 23-04-2016 SHYC_RS06710 e0dffe7c2689fa72b4fa741bd66c86be 276 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 2 276 64.114 T 23-04-2016 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SHYC_RS06710 e0dffe7c2689fa72b4fa741bd66c86be 276 PANTHER PTHR12561 148 276 2.3E-100 T 23-04-2016 SHYC_RS06710 e0dffe7c2689fa72b4fa741bd66c86be 276 PANTHER PTHR12561 3 128 2.3E-100 T 23-04-2016 SHYC_RS06710 e0dffe7c2689fa72b4fa741bd66c86be 276 Gene3D G3DSA:3.90.1550.10 2 274 6.0E-61 T 23-04-2016 SHYC_RS00680 326390b079a53c741ee2ea8ec9e39819 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 4.6E-15 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS00680 326390b079a53c741ee2ea8ec9e39819 234 SUPERFAMILY SSF46785 3 70 9.26E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00680 326390b079a53c741ee2ea8ec9e39819 234 Gene3D G3DSA:3.40.1410.10 62 231 1.3E-47 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SHYC_RS00680 326390b079a53c741ee2ea8ec9e39819 234 PANTHER PTHR11751 1 69 3.8E-24 T 23-04-2016 SHYC_RS00680 326390b079a53c741ee2ea8ec9e39819 234 PANTHER PTHR11751 117 140 3.8E-24 T 23-04-2016 SHYC_RS00680 326390b079a53c741ee2ea8ec9e39819 234 SMART SM00866 87 227 6.4E-26 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SHYC_RS00680 326390b079a53c741ee2ea8ec9e39819 234 Pfam PF07702 UTRA domain 89 221 1.1E-30 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SHYC_RS00680 326390b079a53c741ee2ea8ec9e39819 234 Gene3D G3DSA:1.10.10.10 3 61 8.6E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00680 326390b079a53c741ee2ea8ec9e39819 234 SMART SM00345 7 66 1.1E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS00680 326390b079a53c741ee2ea8ec9e39819 234 SUPERFAMILY SSF64288 76 230 2.51E-40 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SHYC_RS09955 2d7b79c3de28ab109d9ab906e0337f07 307 Pfam PF00294 pfkB family carbohydrate kinase 7 280 2.7E-57 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB SHYC_RS09955 2d7b79c3de28ab109d9ab906e0337f07 307 PANTHER PTHR10584:SF170 1 300 1.5E-103 T 23-04-2016 SHYC_RS09955 2d7b79c3de28ab109d9ab906e0337f07 307 Gene3D G3DSA:3.40.1190.20 36 302 1.4E-79 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS09955 2d7b79c3de28ab109d9ab906e0337f07 307 SUPERFAMILY SSF53613 1 280 1.39E-66 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS09955 2d7b79c3de28ab109d9ab906e0337f07 307 PANTHER PTHR10584 1 300 1.5E-103 T 23-04-2016 SHYC_RS09955 2d7b79c3de28ab109d9ab906e0337f07 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SHYC_RS09955 2d7b79c3de28ab109d9ab906e0337f07 307 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 300 2.2E-107 T 23-04-2016 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 SHYC_RS09955 2d7b79c3de28ab109d9ab906e0337f07 307 Gene3D G3DSA:2.20.150.10 9 35 1.4E-5 T 23-04-2016 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain KEGG: 00052+2.7.1.144|KEGG: 00710+2.7.1.14|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SHYC_RS09955 2d7b79c3de28ab109d9ab906e0337f07 307 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 300 2.7E-106 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SHYC_RS09955 2d7b79c3de28ab109d9ab906e0337f07 307 PIRSF PIRSF000535 1 303 9.6E-89 T 23-04-2016 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 Gene3D G3DSA:3.40.50.720 1 251 1.1E-88 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 251 4.0E-70 T 23-04-2016 SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 9.8E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 9.8E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 9.8E-13 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 SUPERFAMILY SSF51735 4 251 3.48E-83 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PANTHER PTHR24321 1 252 2.3E-65 T 23-04-2016 SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PANTHER PTHR24321:SF6 1 252 2.3E-65 T 23-04-2016 SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 1.1E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.1E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.1E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.1E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01230 c77de77381fc4264854e54b856106b2a 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.1E-42 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08290 15515c414234149303c21af002adbb18 321 PANTHER PTHR22926 1 318 8.9E-138 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS08290 15515c414234149303c21af002adbb18 321 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 14 316 1.2E-102 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS08290 15515c414234149303c21af002adbb18 321 PANTHER PTHR22926:SF5 1 318 8.9E-138 T 23-04-2016 SHYC_RS08290 15515c414234149303c21af002adbb18 321 ProSitePatterns PS01347 MraY family signature 1. 44 56 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS08290 15515c414234149303c21af002adbb18 321 ProSitePatterns PS01348 MraY family signature 2. 166 177 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS08290 15515c414234149303c21af002adbb18 321 Pfam PF00953 Glycosyl transferase family 4 77 246 7.6E-39 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS08290 15515c414234149303c21af002adbb18 321 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 1 320 23.635 T 23-04-2016 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 Pfam PF00501 AMP-binding enzyme 6 375 2.7E-67 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 SUPERFAMILY SSF56801 3 467 1.44E-107 T 23-04-2016 SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 PANTHER PTHR24096 1 466 4.2E-154 T 23-04-2016 SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 Gene3D G3DSA:3.40.50.980 4 144 5.7E-21 T 23-04-2016 SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 Gene3D G3DSA:2.30.38.10 300 368 1.6E-12 T 23-04-2016 SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 PANTHER PTHR24096:SF179 1 466 4.2E-154 T 23-04-2016 SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 Pfam PF13193 AMP-binding enzyme C-terminal domain 384 458 3.1E-14 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 27 464 1.8E-148 T 23-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 1 467 39.603 T 23-04-2016 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 Gene3D G3DSA:3.40.50.980 145 290 1.3E-33 T 23-04-2016 SHYC_RS05495 889d957f5297d680d7e267e6f68beb4f 469 Gene3D G3DSA:3.30.300.30 370 467 3.3E-25 T 23-04-2016 SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 PANTHER PTHR11203 1 560 6.3E-255 T 23-04-2016 SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 PIRSF PIRSF004803 1 556 2.5E-236 T 23-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 Hamap MF_01491 Ribonuclease J [rnj]. 4 556 45.861 T 23-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 PANTHER PTHR11203:SF22 1 560 6.3E-255 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 Gene3D G3DSA:3.60.15.10 6 254 1.0E-76 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 SMART SM00849 21 215 7.0E-22 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 554 3.3E-205 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 SUPERFAMILY SSF56281 11 423 1.25E-89 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 23-04-2016 IPR001587 Ribonuclease J, conserved site SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 358 403 5.3E-9 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SHYC_RS08640 f4761f2f23819074028f565412aa7e9e 560 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 1.7E-19 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS03275 72aa5ba8c9c74469f6e3479a242168a7 321 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 321 198.552 T 23-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SHYC_RS03275 72aa5ba8c9c74469f6e3479a242168a7 321 Pfam PF01791 DeoC/LacD family aldolase 18 279 5.8E-74 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SHYC_RS03275 72aa5ba8c9c74469f6e3479a242168a7 321 PANTHER PTHR39340:SF1 1 320 4.9E-129 T 23-04-2016 SHYC_RS03275 72aa5ba8c9c74469f6e3479a242168a7 321 PANTHER PTHR39340 1 320 4.9E-129 T 23-04-2016 SHYC_RS03275 72aa5ba8c9c74469f6e3479a242168a7 321 SUPERFAMILY SSF51569 6 316 2.53E-69 T 23-04-2016 SHYC_RS03275 72aa5ba8c9c74469f6e3479a242168a7 321 TIGRFAM TIGR01232 lacD: tagatose 1,6-diphosphate aldolase 4 320 2.2E-175 T 23-04-2016 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395|UniPathway: UPA00704 SHYC_RS03275 72aa5ba8c9c74469f6e3479a242168a7 321 SMART SM01133 18 280 9.6E-29 T 23-04-2016 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 SHYC_RS03275 72aa5ba8c9c74469f6e3479a242168a7 321 Gene3D G3DSA:3.20.20.70 3 319 1.8E-130 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS05920 348b79069c30740b33685ff8cf3c1b6f 311 SUPERFAMILY SSF64182 14 306 2.49E-68 T 23-04-2016 SHYC_RS05920 348b79069c30740b33685ff8cf3c1b6f 311 PANTHER PTHR13734:SF42 1 162 2.3E-28 T 23-04-2016 SHYC_RS05920 348b79069c30740b33685ff8cf3c1b6f 311 PANTHER PTHR13734:SF42 264 298 2.3E-28 T 23-04-2016 SHYC_RS05920 348b79069c30740b33685ff8cf3c1b6f 311 PANTHER PTHR13734 1 162 2.3E-28 T 23-04-2016 SHYC_RS05920 348b79069c30740b33685ff8cf3c1b6f 311 PANTHER PTHR13734 264 298 2.3E-28 T 23-04-2016 SHYC_RS05920 348b79069c30740b33685ff8cf3c1b6f 311 Gene3D G3DSA:3.90.1640.10 15 193 8.7E-29 T 23-04-2016 SHYC_RS05920 348b79069c30740b33685ff8cf3c1b6f 311 Pfam PF02272 DHHA1 domain 251 307 1.2E-7 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SHYC_RS05920 348b79069c30740b33685ff8cf3c1b6f 311 Pfam PF01368 DHH family 17 154 3.2E-15 T 23-04-2016 IPR001667 DDH domain SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 PIRSF PIRSF038927 1 665 8.1E-296 T 23-04-2016 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 PANTHER PTHR11465 1 566 0.0 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 Pfam PF06628 Catalase-related immune-responsive 437 500 1.1E-14 T 23-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 ProSitePatterns PS00438 Catalase proximal active site signature. 58 74 - T 23-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 SUPERFAMILY SSF56634 3 518 8.11E-217 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 PANTHER PTHR11465:SF7 1 566 0.0 T 23-04-2016 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 Gene3D G3DSA:2.40.180.10 3 377 8.6E-182 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 Gene3D G3DSA:3.40.50.880 533 664 5.2E-13 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 PRINTS PR00067 Catalase signature 35 58 4.1E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 PRINTS PR00067 Catalase signature 339 365 4.1E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 PRINTS PR00067 Catalase signature 119 136 4.1E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 PRINTS PR00067 Catalase signature 307 334 4.1E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 PRINTS PR00067 Catalase signature 98 116 4.1E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 PRINTS PR00067 Catalase signature 138 156 4.1E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 Pfam PF00199 Catalase 22 407 6.7E-181 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 352 360 - T 23-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS02000 9eafef533b75ec0cad3935705a688147 665 SMART SM01060 22 410 4.2E-271 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS10010 341c12dfa695e04da151dd9862d45c3e 306 Gene3D G3DSA:3.40.50.300 4 200 2.2E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10010 341c12dfa695e04da151dd9862d45c3e 306 SMART SM00833 217 304 1.9E-14 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHYC_RS10010 341c12dfa695e04da151dd9862d45c3e 306 Gene3D G3DSA:3.30.1220.10 210 301 7.9E-9 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHYC_RS10010 341c12dfa695e04da151dd9862d45c3e 306 PANTHER PTHR13748:SF10 4 301 4.7E-63 T 23-04-2016 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW GO:0009236 UniPathway: UPA00148 SHYC_RS10010 341c12dfa695e04da151dd9862d45c3e 306 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 217 302 2.8E-14 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHYC_RS10010 341c12dfa695e04da151dd9862d45c3e 306 SUPERFAMILY SSF90002 217 301 1.23E-11 T 23-04-2016 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal SHYC_RS10010 341c12dfa695e04da151dd9862d45c3e 306 SUPERFAMILY SSF52540 5 191 2.09E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10010 341c12dfa695e04da151dd9862d45c3e 306 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 8 187 3.5E-39 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SHYC_RS10010 341c12dfa695e04da151dd9862d45c3e 306 PANTHER PTHR13748 4 301 4.7E-63 T 23-04-2016 SHYC_RS07985 6ffbb686e5fbc3e8da82a54da0e0e6fa 116 ProSitePatterns PS01015 Ribosomal protein L19 signature. 88 103 - T 23-04-2016 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07985 6ffbb686e5fbc3e8da82a54da0e0e6fa 116 Pfam PF01245 Ribosomal protein L19 6 114 5.9E-52 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07985 6ffbb686e5fbc3e8da82a54da0e0e6fa 116 PIRSF PIRSF002191 1 116 8.8E-51 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07985 6ffbb686e5fbc3e8da82a54da0e0e6fa 116 PRINTS PR00061 Ribosomal protein L19 signature 6 35 1.1E-42 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07985 6ffbb686e5fbc3e8da82a54da0e0e6fa 116 PRINTS PR00061 Ribosomal protein L19 signature 36 65 1.1E-42 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07985 6ffbb686e5fbc3e8da82a54da0e0e6fa 116 PRINTS PR00061 Ribosomal protein L19 signature 90 115 1.1E-42 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07985 6ffbb686e5fbc3e8da82a54da0e0e6fa 116 PANTHER PTHR15680 5 116 2.7E-53 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07985 6ffbb686e5fbc3e8da82a54da0e0e6fa 116 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 4 116 32.636 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07985 6ffbb686e5fbc3e8da82a54da0e0e6fa 116 SUPERFAMILY SSF50104 3 115 9.13E-48 T 23-04-2016 IPR008991 Translation protein SH3-like domain SHYC_RS07985 6ffbb686e5fbc3e8da82a54da0e0e6fa 116 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 5 115 3.8E-50 T 23-04-2016 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07070 83cde91b4d219917abbceb9922ce2cb7 739 SUPERFAMILY SSF56601 293 670 3.87E-82 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SHYC_RS07070 83cde91b4d219917abbceb9922ce2cb7 739 PANTHER PTHR32282:SF0 4 665 1.2E-197 T 23-04-2016 SHYC_RS07070 83cde91b4d219917abbceb9922ce2cb7 739 PANTHER PTHR32282 4 665 1.2E-197 T 23-04-2016 SHYC_RS07070 83cde91b4d219917abbceb9922ce2cb7 739 Gene3D G3DSA:1.10.3810.10 85 268 6.6E-68 T 23-04-2016 SHYC_RS07070 83cde91b4d219917abbceb9922ce2cb7 739 Pfam PF00905 Penicillin binding protein transpeptidase domain 356 647 7.9E-32 T 23-04-2016 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 SHYC_RS07070 83cde91b4d219917abbceb9922ce2cb7 739 Gene3D G3DSA:3.40.710.10 296 686 3.1E-78 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SHYC_RS07070 83cde91b4d219917abbceb9922ce2cb7 739 SUPERFAMILY SSF53955 67 277 4.5E-69 T 23-04-2016 IPR023346 Lysozyme-like domain SHYC_RS07070 83cde91b4d219917abbceb9922ce2cb7 739 Pfam PF00912 Transglycosylase 77 252 5.4E-63 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 PANTHER PTHR21248 26 496 2.5E-244 T 23-04-2016 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 15 496 4.0E-204 T 23-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 SUPERFAMILY SSF56024 281 482 4.71E-51 T 23-04-2016 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 Pfam PF13091 PLD-like domain 337 463 7.4E-27 T 23-04-2016 IPR025202 Phospholipase D-like domain SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 Pfam PF13091 PLD-like domain 147 285 3.0E-13 T 23-04-2016 IPR025202 Phospholipase D-like domain SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 Hamap MF_01916 Cardiolipin synthase. 21 496 42.441 T 23-04-2016 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 SMART SM00155 409 436 1.1E-5 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 SMART SM00155 229 256 4.0E-6 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 Gene3D G3DSA:3.30.870.10 332 472 8.7E-35 T 23-04-2016 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 SUPERFAMILY SSF56024 104 329 5.02E-51 T 23-04-2016 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 Gene3D G3DSA:3.30.870.10 127 331 6.2E-45 T 23-04-2016 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 PANTHER PTHR21248:SF10 26 496 2.5E-244 T 23-04-2016 SHYC_RS03755 bec354992ffc5ed17a2e262c2b75af6d 496 Pfam PF13396 Phospholipase_D-nuclease N-terminal 25 68 6.3E-11 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal SHYC_RS00330 ed38d76fb880f1748c6a221cfb2ef013 556 PANTHER PTHR30607 1 555 2.3E-229 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHYC_RS00330 ed38d76fb880f1748c6a221cfb2ef013 556 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 5 550 4.2E-162 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHYC_RS00330 ed38d76fb880f1748c6a221cfb2ef013 556 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 551 27.667 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHYC_RS00330 ed38d76fb880f1748c6a221cfb2ef013 556 Pfam PF03814 Potassium-transporting ATPase A subunit 5 549 5.5E-195 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHYC_RS00330 ed38d76fb880f1748c6a221cfb2ef013 556 PIRSF PIRSF001294 1 553 1.4E-198 T 23-04-2016 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 SHYC_RS10780 424debab2ffcab145e5c09540358c2f7 186 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 2 180 1.2E-79 T 23-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SHYC_RS10780 424debab2ffcab145e5c09540358c2f7 186 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 3 181 34.687 T 23-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SHYC_RS10780 424debab2ffcab145e5c09540358c2f7 186 Gene3D G3DSA:3.40.50.880 1 184 5.0E-64 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS10780 424debab2ffcab145e5c09540358c2f7 186 PIRSF PIRSF005639 1 186 2.0E-67 T 23-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SHYC_RS10780 424debab2ffcab145e5c09540358c2f7 186 PANTHER PTHR31559 1 186 3.6E-82 T 23-04-2016 SHYC_RS10780 424debab2ffcab145e5c09540358c2f7 186 PANTHER PTHR31559:SF0 1 186 3.6E-82 T 23-04-2016 SHYC_RS10780 424debab2ffcab145e5c09540358c2f7 186 SUPERFAMILY SSF52317 2 180 2.29E-48 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS10780 424debab2ffcab145e5c09540358c2f7 186 ProSitePatterns PS01236 PdxT/SNO family family signature. 40 50 - T 23-04-2016 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SHYC_RS10780 424debab2ffcab145e5c09540358c2f7 186 Pfam PF01174 SNO glutamine amidotransferase family 5 183 3.4E-66 T 23-04-2016 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 2.1E-60 T 23-04-2016 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 4.4E-18 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.2E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.2E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.2E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.2E-24 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 Gene3D G3DSA:2.40.30.10 212 299 7.8E-38 T 23-04-2016 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 59.842 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 PANTHER PTHR23115 1 395 1.1E-252 T 23-04-2016 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 146 3.9E-14 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 7.2E-34 T 23-04-2016 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 Gene3D G3DSA:3.40.50.300 4 211 5.6E-72 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 Gene3D G3DSA:2.40.30.10 301 393 7.2E-47 T 23-04-2016 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 SUPERFAMILY SSF50447 203 302 2.16E-31 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 SUPERFAMILY SSF52540 6 219 3.13E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 PANTHER PTHR23115:SF112 1 395 1.1E-252 T 23-04-2016 SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 SUPERFAMILY SSF50465 303 393 5.18E-36 T 23-04-2016 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal SHYC_RS10630 7ccc1b998c4f648e458d9a6e7c50f9f4 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 2.2E-231 T 23-04-2016 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 35.059 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 Gene3D G3DSA:3.10.290.10 95 192 3.5E-34 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 PANTHER PTHR11831 1 200 1.4E-83 T 23-04-2016 IPR022801 Ribosomal protein S4/S9 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 Gene3D G3DSA:1.10.1050.10 1 94 1.3E-35 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 SMART SM00363 92 156 1.5E-18 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 Pfam PF01479 S4 domain 93 139 8.8E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 SUPERFAMILY SSF55174 2 200 1.83E-67 T 23-04-2016 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 PANTHER PTHR11831:SF4 1 200 1.4E-83 T 23-04-2016 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 90 2.2E-23 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 2.4E-81 T 23-04-2016 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHYC_RS05835 c42e78e8dfe98d244ddbb10a66a0d9ff 200 SMART SM01390 3 91 5.0E-42 T 23-04-2016 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 SHYC_RS08860 8bd07846462cc5a9dce405ee1987aa4a 407 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 85 231 1.2E-36 T 23-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SHYC_RS08860 8bd07846462cc5a9dce405ee1987aa4a 407 PANTHER PTHR33392 3 383 2.3E-135 T 23-04-2016 SHYC_RS08860 8bd07846462cc5a9dce405ee1987aa4a 407 PANTHER PTHR33392:SF3 3 383 2.3E-135 T 23-04-2016 SHYC_RS08860 8bd07846462cc5a9dce405ee1987aa4a 407 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 85 232 6.7E-43 T 23-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SHYC_RS00145 f41c86b89ba8766c352ed4ccd48e0347 466 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 458 4.2E-175 T 23-04-2016 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 SHYC_RS00145 f41c86b89ba8766c352ed4ccd48e0347 466 Gene3D G3DSA:3.40.50.300 173 459 1.0E-104 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00145 f41c86b89ba8766c352ed4ccd48e0347 466 Gene3D G3DSA:1.10.860.10 10 109 1.3E-33 T 23-04-2016 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal SHYC_RS00145 f41c86b89ba8766c352ed4ccd48e0347 466 SUPERFAMILY SSF48024 8 119 3.53E-34 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SHYC_RS00145 f41c86b89ba8766c352ed4ccd48e0347 466 Pfam PF03796 DnaB-like helicase C terminal domain 185 457 3.0E-115 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SHYC_RS00145 f41c86b89ba8766c352ed4ccd48e0347 466 Pfam PF00772 DnaB-like helicase N terminal domain 10 109 4.0E-32 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SHYC_RS00145 f41c86b89ba8766c352ed4ccd48e0347 466 SUPERFAMILY SSF52540 183 450 3.37E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00145 f41c86b89ba8766c352ed4ccd48e0347 466 PANTHER PTHR30153 1 466 9.8E-207 T 23-04-2016 SHYC_RS07890 4e349c2a2a8a861793ed2e4876b4953c 240 PANTHER PTHR21499 6 239 2.8E-116 T 23-04-2016 SHYC_RS07890 4e349c2a2a8a861793ed2e4876b4953c 240 Pfam PF00696 Amino acid kinase family 8 218 1.8E-28 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SHYC_RS07890 4e349c2a2a8a861793ed2e4876b4953c 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 7 239 1.9E-103 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SHYC_RS07890 4e349c2a2a8a861793ed2e4876b4953c 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 5 239 43.939 T 23-04-2016 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SHYC_RS07890 4e349c2a2a8a861793ed2e4876b4953c 240 PIRSF PIRSF005650 2 240 2.8E-95 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SHYC_RS07890 4e349c2a2a8a861793ed2e4876b4953c 240 SUPERFAMILY SSF53633 6 239 1.57E-73 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SHYC_RS07890 4e349c2a2a8a861793ed2e4876b4953c 240 PANTHER PTHR21499:SF23 6 239 2.8E-116 T 23-04-2016 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22|UniPathway: UPA00159 SHYC_RS07890 4e349c2a2a8a861793ed2e4876b4953c 240 Gene3D G3DSA:3.40.1160.10 3 239 3.6E-89 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SHYC_RS02535 6b1af74de89a07f8988bd5d0356478e2 387 Pfam PF00534 Glycosyl transferases group 1 204 353 1.6E-32 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 SHYC_RS02535 6b1af74de89a07f8988bd5d0356478e2 387 Pfam PF13439 Glycosyltransferase Family 4 14 200 1.8E-8 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SHYC_RS02535 6b1af74de89a07f8988bd5d0356478e2 387 SUPERFAMILY SSF53756 6 386 9.42E-54 T 23-04-2016 SHYC_RS02535 6b1af74de89a07f8988bd5d0356478e2 387 PANTHER PTHR12526 14 117 2.5E-36 T 23-04-2016 SHYC_RS02535 6b1af74de89a07f8988bd5d0356478e2 387 PANTHER PTHR12526 141 387 2.5E-36 T 23-04-2016 SHYC_RS02535 6b1af74de89a07f8988bd5d0356478e2 387 Gene3D G3DSA:3.40.50.2000 205 348 2.7E-22 T 23-04-2016 SHYC_RS09905 cb58bcff6a597d459d2fc9665d4e7def 377 Gene3D G3DSA:3.60.120.10 102 373 2.6E-99 T 23-04-2016 IPR005801 ADC synthase GO:0009058 SHYC_RS09905 cb58bcff6a597d459d2fc9665d4e7def 377 SUPERFAMILY SSF56322 31 375 2.22E-93 T 23-04-2016 IPR005801 ADC synthase GO:0009058 SHYC_RS09905 cb58bcff6a597d459d2fc9665d4e7def 377 Pfam PF00425 chorismate binding enzyme 117 371 3.7E-83 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SHYC_RS09905 cb58bcff6a597d459d2fc9665d4e7def 377 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 375 2.5E-101 T 23-04-2016 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543|UniPathway: UPA00077 SHYC_RS09905 cb58bcff6a597d459d2fc9665d4e7def 377 PANTHER PTHR11236:SF18 117 375 2.4E-107 T 23-04-2016 SHYC_RS09905 cb58bcff6a597d459d2fc9665d4e7def 377 PANTHER PTHR11236 117 375 2.4E-107 T 23-04-2016 SHYC_RS09905 cb58bcff6a597d459d2fc9665d4e7def 377 PRINTS PR00095 Anthranilate synthase component I signature 219 232 2.3E-7 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS09905 cb58bcff6a597d459d2fc9665d4e7def 377 PRINTS PR00095 Anthranilate synthase component I signature 233 246 2.3E-7 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS09905 cb58bcff6a597d459d2fc9665d4e7def 377 PRINTS PR00095 Anthranilate synthase component I signature 313 327 2.3E-7 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS09905 cb58bcff6a597d459d2fc9665d4e7def 377 PRINTS PR00095 Anthranilate synthase component I signature 328 342 2.3E-7 T 23-04-2016 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 146 6.2E-41 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 330 70.48 T 23-04-2016 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 Gene3D G3DSA:3.40.50.1370 3 144 7.0E-51 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 329 4.5E-115 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 1.8E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 1.8E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 227 237 1.8E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 1.8E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PRINTS PR00102 Ornithine carbamoyltransferase signature 308 319 1.8E-28 T 23-04-2016 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 153 327 2.0E-50 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PANTHER PTHR11405 5 274 4.1E-155 T 23-04-2016 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PANTHER PTHR11405 294 333 4.1E-155 T 23-04-2016 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PANTHER PTHR11405:SF44 5 274 4.1E-155 T 23-04-2016 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 294 317 1.4E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 274 1.4E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.4E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.4E-24 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 SUPERFAMILY SSF53671 3 331 2.0E-92 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 PANTHER PTHR11405:SF44 294 333 4.1E-155 T 23-04-2016 SHYC_RS01605 53d5594999e43759b40a8e23888bac1a 333 Gene3D G3DSA:3.40.50.1370 145 316 7.5E-63 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PANTHER PTHR22912 1 460 5.2E-250 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 Gene3D G3DSA:3.50.50.60 147 335 7.3E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PIRSF PIRSF000350 3 457 6.4E-97 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 9.1E-42 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 9.1E-42 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 9.1E-42 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 9.1E-42 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 9.1E-42 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 Gene3D G3DSA:3.30.390.30 336 463 9.3E-46 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 329 6.9E-73 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 Gene3D G3DSA:3.50.50.60 9 146 1.2E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 SUPERFAMILY SSF55424 344 466 9.45E-39 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 SUPERFAMILY SSF51905 7 339 1.85E-63 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 1.2E-34 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 466 4.9E-171 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PANTHER PTHR22912:SF146 1 460 5.2E-250 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 6.9E-76 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 6.9E-76 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 6.9E-76 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 6.9E-76 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 6.9E-76 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 6.9E-76 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 6.9E-76 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 6.9E-76 T 23-04-2016 SHYC_RS08600 553daa1798d4b4d172f03ecacd49b65d 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 6.9E-76 T 23-04-2016 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 PANTHER PTHR11361:SF86 1 868 0.0 T 23-04-2016 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 Pfam PF00488 MutS domain V 599 784 1.6E-82 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 SUPERFAMILY SSF48334 251 553 4.45E-85 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 Pfam PF05190 MutS family domain IV 412 505 2.3E-27 T 23-04-2016 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 SMART SM00533 268 578 6.6E-105 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 Pfam PF05188 MutS domain II 125 237 1.1E-14 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 PANTHER PTHR11361 1 868 0.0 T 23-04-2016 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 Pfam PF01624 MutS domain I 5 115 1.0E-45 T 23-04-2016 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 859 24.973 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 676 692 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 Gene3D G3DSA:1.10.1420.10 300 461 6.1E-55 T 23-04-2016 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 5 864 0.0 T 23-04-2016 IPR005748 DNA mismatch repair protein MutS, type 1 GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 Gene3D G3DSA:3.40.1170.10 2 115 2.3E-51 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 SUPERFAMILY SSF52540 554 786 3.04E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 Gene3D G3DSA:3.30.420.110 124 243 9.3E-27 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 SMART SM00534 595 782 2.2E-112 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 SUPERFAMILY SSF53150 114 264 2.75E-34 T 23-04-2016 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 SUPERFAMILY SSF55271 2 112 1.7E-43 T 23-04-2016 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 Pfam PF05192 MutS domain III 256 546 1.5E-42 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHYC_RS07680 09f187e409b190a2a32c144ac262aacd 868 Gene3D G3DSA:3.40.50.300 554 785 2.0E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09135 4b2c3ee6c4b5b2c4d023de735e09adab 357 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 2.6E-17 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SHYC_RS09135 4b2c3ee6c4b5b2c4d023de735e09adab 357 PANTHER PTHR24220:SF535 7 327 2.2E-163 T 23-04-2016 SHYC_RS09135 4b2c3ee6c4b5b2c4d023de735e09adab 357 SMART SM00382 34 242 2.2E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS09135 4b2c3ee6c4b5b2c4d023de735e09adab 357 Gene3D G3DSA:3.40.50.300 5 258 2.3E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09135 4b2c3ee6c4b5b2c4d023de735e09adab 357 Pfam PF00005 ABC transporter 26 184 5.0E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS09135 4b2c3ee6c4b5b2c4d023de735e09adab 357 SUPERFAMILY SSF52540 5 255 5.83E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09135 4b2c3ee6c4b5b2c4d023de735e09adab 357 PANTHER PTHR24220 7 327 2.2E-163 T 23-04-2016 SHYC_RS09135 4b2c3ee6c4b5b2c4d023de735e09adab 357 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS09135 4b2c3ee6c4b5b2c4d023de735e09adab 357 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 298 6.5E-12 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SHYC_RS07435 17a1d93ac0940b3ab885057cf85a6db3 125 SUPERFAMILY SSF81330 10 115 1.44E-31 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHYC_RS07435 17a1d93ac0940b3ab885057cf85a6db3 125 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 118 1.7E-39 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHYC_RS07435 17a1d93ac0940b3ab885057cf85a6db3 125 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 121 9.4E-40 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHYC_RS07435 17a1d93ac0940b3ab885057cf85a6db3 125 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 5.6E-12 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHYC_RS07435 17a1d93ac0940b3ab885057cf85a6db3 125 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 72 80 5.6E-12 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHYC_RS07435 17a1d93ac0940b3ab885057cf85a6db3 125 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 81 90 5.6E-12 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHYC_RS07435 17a1d93ac0940b3ab885057cf85a6db3 125 Gene3D G3DSA:1.20.5.220 109 118 8.0E-4 T 23-04-2016 IPR029027 Single alpha-helix domain SHYC_RS07435 17a1d93ac0940b3ab885057cf85a6db3 125 PANTHER PTHR30266:SF2 1 122 1.4E-45 T 23-04-2016 SHYC_RS07435 17a1d93ac0940b3ab885057cf85a6db3 125 PANTHER PTHR30266 1 122 1.4E-45 T 23-04-2016 SHYC_RS07435 17a1d93ac0940b3ab885057cf85a6db3 125 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 122 28.351 T 23-04-2016 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 SHYC_RS11625 46031eea22922f750ce760931b29d6e4 276 SUPERFAMILY SSF110849 14 105 4.45E-28 T 23-04-2016 IPR003115 ParB/Sulfiredoxin SHYC_RS11625 46031eea22922f750ce760931b29d6e4 276 PANTHER PTHR33375 11 276 1.8E-117 T 23-04-2016 SHYC_RS11625 46031eea22922f750ce760931b29d6e4 276 Gene3D G3DSA:3.90.1530.10 7 109 2.9E-39 T 23-04-2016 SHYC_RS11625 46031eea22922f750ce760931b29d6e4 276 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 11 183 6.7E-60 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SHYC_RS11625 46031eea22922f750ce760931b29d6e4 276 Gene3D G3DSA:1.10.260.40 119 145 2.6E-4 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS11625 46031eea22922f750ce760931b29d6e4 276 Pfam PF02195 ParB-like nuclease domain 16 102 2.2E-26 T 23-04-2016 IPR003115 ParB/Sulfiredoxin SHYC_RS11625 46031eea22922f750ce760931b29d6e4 276 Pfam PF08535 KorB domain 126 189 9.5E-5 T 23-04-2016 IPR013741 Transcriptional repressor protein KorB SHYC_RS11625 46031eea22922f750ce760931b29d6e4 276 PANTHER PTHR33375:SF3 11 276 1.8E-117 T 23-04-2016 SHYC_RS11625 46031eea22922f750ce760931b29d6e4 276 SMART SM00470 14 103 1.5E-32 T 23-04-2016 IPR003115 ParB/Sulfiredoxin SHYC_RS11625 46031eea22922f750ce760931b29d6e4 276 SUPERFAMILY SSF109709 96 205 2.17E-32 T 23-04-2016 SHYC_RS02515 f10eda42a2dc8d136fe87e8d75a03d36 329 Pfam PF00107 Zinc-binding dehydrogenase 162 269 3.5E-14 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SHYC_RS02515 f10eda42a2dc8d136fe87e8d75a03d36 329 PANTHER PTHR11695 19 327 1.5E-134 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SHYC_RS02515 f10eda42a2dc8d136fe87e8d75a03d36 329 Gene3D G3DSA:3.90.180.10 20 134 5.1E-14 T 23-04-2016 IPR011032 GroES-like SHYC_RS02515 f10eda42a2dc8d136fe87e8d75a03d36 329 SUPERFAMILY SSF50129 5 147 1.02E-42 T 23-04-2016 IPR011032 GroES-like SHYC_RS02515 f10eda42a2dc8d136fe87e8d75a03d36 329 SUPERFAMILY SSF51735 119 295 3.74E-36 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02515 f10eda42a2dc8d136fe87e8d75a03d36 329 SMART SM00829 19 325 8.1E-7 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SHYC_RS02515 f10eda42a2dc8d136fe87e8d75a03d36 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 89 7.3E-6 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SHYC_RS02515 f10eda42a2dc8d136fe87e8d75a03d36 329 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 327 2.8E-129 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SHYC_RS02515 f10eda42a2dc8d136fe87e8d75a03d36 329 Gene3D G3DSA:3.40.50.720 135 295 4.9E-61 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02515 f10eda42a2dc8d136fe87e8d75a03d36 329 PANTHER PTHR11695:SF13 19 327 1.5E-134 T 23-04-2016 IPR014188 Acrylyl-CoA reductase AcuI SHYC_RS09760 0a0e6028aee411f90fe91895864c14c1 356 Gene3D G3DSA:3.30.70.270 189 349 2.8E-42 T 23-04-2016 SHYC_RS09760 0a0e6028aee411f90fe91895864c14c1 356 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 185 349 5.6E-40 T 23-04-2016 IPR000160 GGDEF domain SHYC_RS09760 0a0e6028aee411f90fe91895864c14c1 356 Pfam PF00990 Diguanylate cyclase, GGDEF domain 188 346 1.0E-35 T 23-04-2016 IPR000160 GGDEF domain SHYC_RS09760 0a0e6028aee411f90fe91895864c14c1 356 PANTHER PTHR10799:SF750 220 349 8.6E-19 T 23-04-2016 SHYC_RS09760 0a0e6028aee411f90fe91895864c14c1 356 PANTHER PTHR10799:SF750 2 179 8.6E-19 T 23-04-2016 SHYC_RS09760 0a0e6028aee411f90fe91895864c14c1 356 Pfam PF07694 5TMR of 5TMR-LYT 16 173 3.5E-9 T 23-04-2016 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 SHYC_RS09760 0a0e6028aee411f90fe91895864c14c1 356 SMART SM00267 176 350 9.8E-44 T 23-04-2016 IPR000160 GGDEF domain SHYC_RS09760 0a0e6028aee411f90fe91895864c14c1 356 SUPERFAMILY SSF55073 192 349 5.02E-37 T 23-04-2016 IPR029787 Nucleotide cyclase SHYC_RS09760 0a0e6028aee411f90fe91895864c14c1 356 PANTHER PTHR10799 220 349 8.6E-19 T 23-04-2016 SHYC_RS09760 0a0e6028aee411f90fe91895864c14c1 356 PANTHER PTHR10799 2 179 8.6E-19 T 23-04-2016 SHYC_RS06575 19cab642429c04ddbbae221559ce74ee 136 Gene3D G3DSA:1.10.10.10 4 78 2.4E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06575 19cab642429c04ddbbae221559ce74ee 136 PANTHER PTHR33202 1 134 1.4E-75 T 23-04-2016 SHYC_RS06575 19cab642429c04ddbbae221559ce74ee 136 Pfam PF01475 Ferric uptake regulator family 13 128 7.7E-30 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHYC_RS06575 19cab642429c04ddbbae221559ce74ee 136 PANTHER PTHR33202:SF1 1 134 1.4E-75 T 23-04-2016 SHYC_RS06575 19cab642429c04ddbbae221559ce74ee 136 SUPERFAMILY SSF46785 5 133 2.48E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 SUPERFAMILY SSF54999 5 102 1.83E-37 T 23-04-2016 IPR027486 Ribosomal protein S10 domain SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.1E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.1E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.1E-18 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 PANTHER PTHR11700 1 102 3.9E-49 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 23-04-2016 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 8.2E-46 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 SMART SM01403 7 101 3.0E-58 T 23-04-2016 IPR027486 Ribosomal protein S10 domain SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.363 T 23-04-2016 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 Gene3D G3DSA:3.30.70.600 4 102 2.3E-43 T 23-04-2016 IPR027486 Ribosomal protein S10 domain SHYC_RS03055 0e49c8543fa37bcfb6b13146ae461a22 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 2.0E-35 T 23-04-2016 IPR027486 Ribosomal protein S10 domain SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 Gene3D G3DSA:3.90.1170.10 23 137 2.3E-55 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 2.2E-60 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 39.89 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 6.7E-51 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 9.1E-40 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 9.1E-40 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 9.1E-40 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 9.1E-40 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 SUPERFAMILY SSF54686 1 137 2.88E-58 T 23-04-2016 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 PANTHER PTHR12220 1 137 1.0E-73 T 23-04-2016 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 SHYC_RS03095 4a1a64d2ca1a7a7689d0d4818913cb80 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 23-04-2016 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS01695 9f9a810dc57d2f884b07daea34eb64bb 459 Gene3D G3DSA:3.40.605.10 2 244 2.9E-92 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS01695 9f9a810dc57d2f884b07daea34eb64bb 459 Pfam PF00171 Aldehyde dehydrogenase family 3 453 7.9E-161 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS01695 9f9a810dc57d2f884b07daea34eb64bb 459 Gene3D G3DSA:3.40.309.10 245 429 2.5E-64 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHYC_RS01695 9f9a810dc57d2f884b07daea34eb64bb 459 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 230 237 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS01695 9f9a810dc57d2f884b07daea34eb64bb 459 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 258 269 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS01695 9f9a810dc57d2f884b07daea34eb64bb 459 SUPERFAMILY SSF53720 3 457 2.23E-157 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHYC_RS06425 523c11e917111608b5a503584f3d6ab5 373 Pfam PF06969 HemN C-terminal domain 298 360 8.2E-14 T 23-04-2016 IPR010723 HemN, C-terminal SHYC_RS06425 523c11e917111608b5a503584f3d6ab5 373 SMART SM00729 3 217 2.0E-56 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHYC_RS06425 523c11e917111608b5a503584f3d6ab5 373 PANTHER PTHR13932 5 372 2.3E-145 T 23-04-2016 SHYC_RS06425 523c11e917111608b5a503584f3d6ab5 373 Pfam PF04055 Radical SAM superfamily 8 171 8.0E-19 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS06425 523c11e917111608b5a503584f3d6ab5 373 SUPERFAMILY SSF102114 5 371 2.22E-112 T 23-04-2016 SHYC_RS06425 523c11e917111608b5a503584f3d6ab5 373 Gene3D G3DSA:3.80.30.20 5 233 1.7E-40 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHYC_RS06425 523c11e917111608b5a503584f3d6ab5 373 PANTHER PTHR13932:SF5 5 372 2.3E-145 T 23-04-2016 SHYC_RS06425 523c11e917111608b5a503584f3d6ab5 373 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 357 8.2E-118 T 23-04-2016 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.- SHYC_RS11310 f08eef915171a107cf71e7a33dc527d5 289 SUPERFAMILY SSF48179 161 280 9.52E-30 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS11310 f08eef915171a107cf71e7a33dc527d5 289 Gene3D G3DSA:3.40.50.720 2 168 1.2E-26 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS11310 f08eef915171a107cf71e7a33dc527d5 289 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 132 1.5E-20 T 23-04-2016 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS11310 f08eef915171a107cf71e7a33dc527d5 289 PANTHER PTHR21708 1 281 9.2E-40 T 23-04-2016 SHYC_RS11310 f08eef915171a107cf71e7a33dc527d5 289 Gene3D G3DSA:1.10.1040.10 169 279 9.6E-35 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHYC_RS11310 f08eef915171a107cf71e7a33dc527d5 289 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 161 279 3.5E-27 T 23-04-2016 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS11310 f08eef915171a107cf71e7a33dc527d5 289 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 3 279 5.2E-53 T 23-04-2016 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS11310 f08eef915171a107cf71e7a33dc527d5 289 SUPERFAMILY SSF51735 3 127 8.86E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 SUPERFAMILY SSF52540 4 191 5.79E-68 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 Pfam PF00625 Guanylate kinase 8 187 2.7E-51 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 41 58 - T 23-04-2016 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 SMART SM00072 5 188 7.7E-69 T 23-04-2016 IPR008145 Guanylate kinase/L-type calcium channel beta subunit SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 PANTHER PTHR23117:SF13 4 207 8.2E-94 T 23-04-2016 SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 Gene3D G3DSA:3.30.63.10 36 88 8.5E-27 T 23-04-2016 SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 Gene3D G3DSA:3.40.50.300 89 202 1.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 Gene3D G3DSA:3.40.50.300 2 28 1.8E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 PANTHER PTHR23117 4 207 8.2E-94 T 23-04-2016 SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 6 185 1.3E-71 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SHYC_RS08155 4a641edade178bf84a3daebebcb0ae88 207 Hamap MF_00328 Guanylate kinase [gmk]. 4 188 36.832 T 23-04-2016 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 SMART SM00382 141 272 2.4E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 SMART SM00760 353 422 1.3E-42 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 SUPERFAMILY SSF52540 109 320 7.2E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 Gene3D G3DSA:3.40.50.300 102 273 3.8E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 174 188 3.5E-52 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 403 422 3.5E-52 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 206 220 3.5E-52 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 142 162 3.5E-52 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 240 267 3.5E-52 T 23-04-2016 IPR020591 Chromosomal replication control, initiator DnaA-like SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 Gene3D G3DSA:1.10.1750.10 344 445 3.4E-42 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 Pfam PF00308 Bacterial dnaA protein 110 326 2.2E-102 T 23-04-2016 IPR013317 Chromosomal replication initiator protein DnaA SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 354 422 3.0E-31 T 23-04-2016 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 PANTHER PTHR30050 2 446 1.8E-227 T 23-04-2016 SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 PANTHER PTHR30050:SF2 2 446 1.8E-227 T 23-04-2016 SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 SUPERFAMILY SSF48295 340 445 1.15E-37 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 Pfam PF11638 DnaA N-terminal domain 4 66 2.8E-9 T 23-04-2016 IPR024633 DnaA N-terminal domain SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 7 443 5.2E-181 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 ProSitePatterns PS01008 DnaA protein signature. 403 422 - T 23-04-2016 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 4 444 34.05 T 23-04-2016 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 SHYC_RS00005 6e6268a9c98600ca55890cc428e04ea8 446 Gene3D G3DSA:1.10.8.60 275 343 6.1E-30 T 23-04-2016 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 SUPERFAMILY SSF55973 5 111 2.04E-47 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 245 384 3.8E-71 T 23-04-2016 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 271 279 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 127 137 - T 23-04-2016 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 SUPERFAMILY SSF55973 125 244 1.29E-49 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 9.6E-43 T 23-04-2016 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 Gene3D G3DSA:3.30.300.10 13 143 2.2E-48 T 23-04-2016 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 SUPERFAMILY SSF55973 245 395 1.92E-71 T 23-04-2016 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 PANTHER PTHR11964 1 390 1.6E-275 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 Pfam PF02772 S-adenosylmethionine synthetase, central domain 126 243 8.7E-47 T 23-04-2016 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 Gene3D G3DSA:3.30.300.10 256 396 2.6E-71 T 23-04-2016 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 394 1.5E-186 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 PIRSF PIRSF000497 1 396 4.5E-177 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 395 58.917 T 23-04-2016 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: REACT_13433|UniPathway: UPA00315 SHYC_RS05525 460b14d909aa32b01faff8e45b48a287 399 Gene3D G3DSA:3.30.300.10 144 245 3.5E-45 T 23-04-2016 SHYC_RS02195 eb01f67b7e6d9c66ecc1386171cc7f50 592 PANTHER PTHR24221 1 581 5.8E-212 T 23-04-2016 SHYC_RS02195 eb01f67b7e6d9c66ecc1386171cc7f50 592 Gene3D G3DSA:3.40.50.300 335 565 2.7E-67 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02195 eb01f67b7e6d9c66ecc1386171cc7f50 592 SUPERFAMILY SSF90123 6 320 6.02E-72 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS02195 eb01f67b7e6d9c66ecc1386171cc7f50 592 PANTHER PTHR24221:SF202 1 581 5.8E-212 T 23-04-2016 SHYC_RS02195 eb01f67b7e6d9c66ecc1386171cc7f50 592 Pfam PF00005 ABC transporter 352 500 8.0E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS02195 eb01f67b7e6d9c66ecc1386171cc7f50 592 Gene3D G3DSA:1.20.1560.10 6 318 9.0E-71 T 23-04-2016 SHYC_RS02195 eb01f67b7e6d9c66ecc1386171cc7f50 592 Pfam PF00664 ABC transporter transmembrane region 21 291 2.2E-44 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS02195 eb01f67b7e6d9c66ecc1386171cc7f50 592 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS02195 eb01f67b7e6d9c66ecc1386171cc7f50 592 SUPERFAMILY SSF52540 327 572 3.33E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02195 eb01f67b7e6d9c66ecc1386171cc7f50 592 SMART SM00382 361 548 1.4E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS06465 280314d85e8980c5ec9e95483acd89cc 58 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.847 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SHYC_RS06465 280314d85e8980c5ec9e95483acd89cc 58 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 23-04-2016 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06465 280314d85e8980c5ec9e95483acd89cc 58 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 58 1.4E-21 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SHYC_RS06465 280314d85e8980c5ec9e95483acd89cc 58 PANTHER PTHR21109 1 58 5.3E-22 T 23-04-2016 SHYC_RS06465 280314d85e8980c5ec9e95483acd89cc 58 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 5.3E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SHYC_RS06465 280314d85e8980c5ec9e95483acd89cc 58 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 5.3E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SHYC_RS06465 280314d85e8980c5ec9e95483acd89cc 58 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 5.3E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SHYC_RS06465 280314d85e8980c5ec9e95483acd89cc 58 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 5.3E-16 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SHYC_RS06465 280314d85e8980c5ec9e95483acd89cc 58 Pfam PF01165 Ribosomal protein S21 5 57 5.6E-22 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SHYC_RS06465 280314d85e8980c5ec9e95483acd89cc 58 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 1.0E-8 T 23-04-2016 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 Gene3D G3DSA:2.30.24.10 4 57 4.2E-20 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 ProSitePatterns PS00654 PRD domain signature. 101 113 - T 23-04-2016 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 SMART SM01061 4 62 5.3E-23 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 Pfam PF03123 CAT RNA binding domain 4 59 4.9E-20 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 SUPERFAMILY SSF63520 175 274 3.4E-21 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 Pfam PF00874 PRD domain 86 165 3.0E-21 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 Pfam PF00874 PRD domain 184 273 1.4E-18 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 Gene3D G3DSA:1.10.1790.10 69 167 3.2E-25 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 SUPERFAMILY SSF63520 58 167 1.1E-27 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 PANTHER PTHR30185:SF3 3 282 1.3E-101 T 23-04-2016 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 SUPERFAMILY SSF50151 4 56 1.83E-14 T 23-04-2016 IPR004341 CAT RNA-binding domain GO:0003723 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 Gene3D G3DSA:1.10.1790.10 173 275 2.0E-23 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS07390 4dd9612816cca34cb6ad9e3598993acd 283 PANTHER PTHR30185 3 282 1.3E-101 T 23-04-2016 SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 Gene3D G3DSA:3.40.50.720 3 244 4.1E-95 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 188 8.7E-5 T 23-04-2016 SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.5E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 1.5E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.5E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.5E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.5E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.5E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 243 2.1E-72 T 23-04-2016 SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PANTHER PTHR24322 7 136 3.6E-70 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PANTHER PTHR24322 152 184 3.6E-70 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 5 242 3.2E-106 T 23-04-2016 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 SUPERFAMILY SSF51735 3 244 4.14E-93 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PANTHER PTHR24322:SF328 7 136 3.6E-70 T 23-04-2016 SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PANTHER PTHR24322:SF328 152 184 3.6E-70 T 23-04-2016 SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.9E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 4.9E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS08035 adc40b783ee3bfb76c8b6d656ade1785 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 4.9E-15 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00170 bf728e4664ea7117865c99008f877cfb 233 Pfam PF00072 Response regulator receiver domain 5 114 6.6E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS00170 bf728e4664ea7117865c99008f877cfb 233 SUPERFAMILY SSF46894 128 229 3.64E-31 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHYC_RS00170 bf728e4664ea7117865c99008f877cfb 233 SUPERFAMILY SSF52172 3 127 1.42E-42 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS00170 bf728e4664ea7117865c99008f877cfb 233 Gene3D G3DSA:1.10.10.10 131 231 1.6E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00170 bf728e4664ea7117865c99008f877cfb 233 SMART SM00448 3 113 4.2E-45 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS00170 bf728e4664ea7117865c99008f877cfb 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 4.0E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS00170 bf728e4664ea7117865c99008f877cfb 233 SMART SM00862 153 229 2.3E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS00170 bf728e4664ea7117865c99008f877cfb 233 PANTHER PTHR26402 3 227 2.2E-100 T 23-04-2016 SHYC_RS00170 bf728e4664ea7117865c99008f877cfb 233 Gene3D G3DSA:3.40.50.2300 2 122 2.7E-42 T 23-04-2016 SHYC_RS00170 bf728e4664ea7117865c99008f877cfb 233 PANTHER PTHR26402:SF614 3 227 2.2E-100 T 23-04-2016 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 SUPERFAMILY SSF51445 306 607 7.02E-13 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 SUPERFAMILY SSF46689 202 253 1.39E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 Gene3D G3DSA:3.20.20.80 471 601 1.7E-9 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 Gene3D G3DSA:3.20.20.80 306 391 2.3E-4 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 PANTHER PTHR11019 26 257 6.6E-36 T 23-04-2016 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 PANTHER PTHR11019:SF128 26 257 6.6E-36 T 23-04-2016 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 SUPERFAMILY SSF46689 149 200 2.15E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 Gene3D G3DSA:1.10.10.60 148 202 3.2E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 203 245 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 Gene3D G3DSA:2.60.40.1500 602 738 3.0E-15 T 23-04-2016 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 SUPERFAMILY SSF51011 596 740 2.05E-16 T 23-04-2016 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 Gene3D G3DSA:1.10.10.60 203 258 4.0E-15 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 Pfam PF12833 Helix-turn-helix domain 172 250 3.2E-19 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHYC_RS00415 9c9589ebd949aa65a6d242e344fa1d58 742 SMART SM00342 166 249 9.3E-29 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 Pfam PF01795 MraW methylase family 2 308 4.9E-135 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 SUPERFAMILY SSF53335 214 308 3.46E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 SUPERFAMILY SSF53335 3 112 3.46E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 Gene3D G3DSA:3.40.50.150 217 310 1.6E-51 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 Gene3D G3DSA:3.40.50.150 4 109 1.6E-51 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 Gene3D G3DSA:1.10.150.170 111 216 3.2E-39 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 37.855 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 308 7.3E-126 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 PIRSF PIRSF004486 1 311 2.4E-106 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 PANTHER PTHR11265:SF0 2 311 3.0E-150 T 23-04-2016 SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 PANTHER PTHR11265 2 311 3.0E-150 T 23-04-2016 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS08305 08f63fcef3184accded3c9d883180c40 311 SUPERFAMILY SSF81799 113 214 1.2E-35 T 23-04-2016 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS08865 2e8b3e8ce20ba1eadefc60e35771225a 156 ProDom PD034207 SA0907 SIMILAR ORF2 TRANSCRIPTIONAL AUTOLYSIN SAV1055 MW0938 ATLR CDS REGULATOR 1 155 3.0E-71 T 23-04-2016 IPR024469 Protein of unknown function DUF2538 SHYC_RS08865 2e8b3e8ce20ba1eadefc60e35771225a 156 Pfam PF10804 Protein of unknown function (DUF2538) 1 155 6.6E-91 T 23-04-2016 IPR024469 Protein of unknown function DUF2538 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Pfam PF00746 Gram positive anchor 1150 1186 9.0E-5 T 23-04-2016 IPR019948 Gram-positive anchor SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 357 505 4.7E-21 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 PANTHER PTHR23303:SF17 523 985 7.9E-67 T 23-04-2016 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 SUPERFAMILY SSF49401 355 543 3.6E-32 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Gene3D G3DSA:2.60.40.1280 202 368 4.7E-35 T 23-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Pfam PF05738 Cna protein B-type domain 782 835 3.8E-11 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Pfam PF05738 Cna protein B-type domain 665 717 5.9E-13 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Pfam PF05738 Cna protein B-type domain 546 609 1.3E-10 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Pfam PF05738 Cna protein B-type domain 899 953 3.0E-11 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Gene3D G3DSA:2.60.40.10 536 596 2.1E-22 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Gene3D G3DSA:2.60.40.10 646 711 9.9E-25 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Gene3D G3DSA:2.60.40.10 880 947 4.2E-24 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Gene3D G3DSA:2.60.40.10 763 830 5.7E-23 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 SUPERFAMILY SSF49401 202 347 5.22E-27 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 SUPERFAMILY SSF117074 852 963 1.57E-20 T 23-04-2016 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 SUPERFAMILY SSF117074 735 843 6.15E-20 T 23-04-2016 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1157 1187 2.3E-5 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Gene3D G3DSA:2.60.40.1290 369 535 1.6E-35 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 SUPERFAMILY SSF117074 620 716 2.22E-19 T 23-04-2016 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 SUPERFAMILY SSF117074 516 602 3.53E-20 T 23-04-2016 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 PANTHER PTHR23303 523 985 7.9E-67 T 23-04-2016 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 4 44 2.5E-10 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS00475 dc7d8710c3313f901603d564681f003c 1192 Pfam PF04650 YSIRK type signal peptide 9 33 7.4E-11 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS02460 b1c43440fdaaf239632d8012a4f60f7a 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 1.8E-118 T 23-04-2016 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343 SHYC_RS02460 b1c43440fdaaf239632d8012a4f60f7a 295 PANTHER PTHR22572:SF14 6 289 1.0E-109 T 23-04-2016 SHYC_RS02460 b1c43440fdaaf239632d8012a4f60f7a 295 Gene3D G3DSA:3.90.550.10 5 272 2.5E-75 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS02460 b1c43440fdaaf239632d8012a4f60f7a 295 SUPERFAMILY SSF53448 2 268 3.55E-70 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS02460 b1c43440fdaaf239632d8012a4f60f7a 295 Pfam PF00483 Nucleotidyl transferase 6 259 4.0E-35 T 23-04-2016 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 Reactome: REACT_17015 SHYC_RS02460 b1c43440fdaaf239632d8012a4f60f7a 295 PANTHER PTHR22572 6 289 1.0E-109 T 23-04-2016 SHYC_RS01525 46dff8488d1d0ee633230d95448e53d3 225 PANTHER PTHR26402:SF50 3 217 1.2E-65 T 23-04-2016 SHYC_RS01525 46dff8488d1d0ee633230d95448e53d3 225 SUPERFAMILY SSF46894 121 219 2.75E-29 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHYC_RS01525 46dff8488d1d0ee633230d95448e53d3 225 SMART SM00862 143 219 1.4E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS01525 46dff8488d1d0ee633230d95448e53d3 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 218 1.1E-26 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS01525 46dff8488d1d0ee633230d95448e53d3 225 Gene3D G3DSA:1.10.10.10 122 220 4.7E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01525 46dff8488d1d0ee633230d95448e53d3 225 Gene3D G3DSA:3.40.50.2300 3 121 4.3E-28 T 23-04-2016 SHYC_RS01525 46dff8488d1d0ee633230d95448e53d3 225 SUPERFAMILY SSF52172 4 176 3.84E-29 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS01525 46dff8488d1d0ee633230d95448e53d3 225 PANTHER PTHR26402 3 217 1.2E-65 T 23-04-2016 SHYC_RS01525 46dff8488d1d0ee633230d95448e53d3 225 SMART SM00448 3 113 1.9E-29 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS01525 46dff8488d1d0ee633230d95448e53d3 225 Pfam PF00072 Response regulator receiver domain 5 113 5.4E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS08300 3f69d8f0f58b554f6dc7996c27f15150 139 Hamap MF_00910 Cell division protein FtsL [ftsL]. 48 132 12.821 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SHYC_RS08300 3f69d8f0f58b554f6dc7996c27f15150 139 PANTHER PTHR41300:SF1 13 134 2.1E-27 T 23-04-2016 SHYC_RS08300 3f69d8f0f58b554f6dc7996c27f15150 139 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 50 133 1.7E-20 T 23-04-2016 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 SHYC_RS08300 3f69d8f0f58b554f6dc7996c27f15150 139 PANTHER PTHR41300 13 134 2.1E-27 T 23-04-2016 SHYC_RS08300 3f69d8f0f58b554f6dc7996c27f15150 139 Pfam PF04977 Septum formation initiator 57 132 1.3E-9 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 SHYC_RS06645 4ea1f4d887c0928820c29483c06fae51 103 SUPERFAMILY SSF89957 1 102 1.05E-29 T 23-04-2016 IPR029756 MTH1187/YkoF-like SHYC_RS06645 4ea1f4d887c0928820c29483c06fae51 103 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 101 2.4E-34 T 23-04-2016 IPR002767 Thiamine-binding protein SHYC_RS06645 4ea1f4d887c0928820c29483c06fae51 103 PANTHER PTHR33777 1 102 5.1E-61 T 23-04-2016 SHYC_RS06645 4ea1f4d887c0928820c29483c06fae51 103 Pfam PF01910 Thiamine-binding protein 4 99 1.1E-32 T 23-04-2016 IPR002767 Thiamine-binding protein SHYC_RS06645 4ea1f4d887c0928820c29483c06fae51 103 Gene3D G3DSA:3.30.70.930 1 102 4.2E-34 T 23-04-2016 IPR029756 MTH1187/YkoF-like SHYC_RS06645 4ea1f4d887c0928820c29483c06fae51 103 PANTHER PTHR33777:SF2 1 102 5.1E-61 T 23-04-2016 SHYC_RS02955 c7fdada9ce6d921f41752628e95068db 162 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 154 3.3E-62 T 23-04-2016 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 UniPathway: UPA00344 SHYC_RS02955 c7fdada9ce6d921f41752628e95068db 162 SUPERFAMILY SSF55040 11 156 8.76E-58 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SHYC_RS02955 c7fdada9ce6d921f41752628e95068db 162 Gene3D G3DSA:3.30.70.640 3 156 7.7E-66 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SHYC_RS02955 c7fdada9ce6d921f41752628e95068db 162 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 160 34.613 T 23-04-2016 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type UniPathway: UPA00344 SHYC_RS02955 c7fdada9ce6d921f41752628e95068db 162 Pfam PF01967 MoaC family 15 152 1.3E-54 T 23-04-2016 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 UniPathway: UPA00344 SHYC_RS02955 c7fdada9ce6d921f41752628e95068db 162 PANTHER PTHR22960 1 159 1.2E-94 T 23-04-2016 SHYC_RS11675 45127ee7f5d432f8d88e99f667fbe95f 277 PANTHER PTHR33643 6 276 3.7E-38 T 23-04-2016 SHYC_RS11675 45127ee7f5d432f8d88e99f667fbe95f 277 PANTHER PTHR33643:SF1 6 276 3.7E-38 T 23-04-2016 SHYC_RS11675 45127ee7f5d432f8d88e99f667fbe95f 277 Pfam PF01774 UreD urease accessory protein 49 251 3.7E-39 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 SHYC_RS11675 45127ee7f5d432f8d88e99f667fbe95f 277 Hamap MF_01384 Urease accessory protein UreD [ureD]. 6 263 20.855 T 23-04-2016 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 Gene3D G3DSA:3.40.120.10 18 209 3.4E-52 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 315 435 7.6E-14 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 SUPERFAMILY SSF53738 201 302 7.95E-18 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 Gene3D G3DSA:3.40.120.10 298 440 6.5E-29 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 133 142 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 496 532 4.2E-6 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 PANTHER PTHR22573 18 535 2.1E-159 T 23-04-2016 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 203 303 1.1E-20 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 39 175 3.3E-38 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 SUPERFAMILY SSF53738 28 207 1.26E-39 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 132 146 2.5E-5 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 286 301 2.5E-5 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 SUPERFAMILY SSF55957 431 467 6.41E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 SUPERFAMILY SSF55957 499 532 6.41E-10 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 Gene3D G3DSA:3.40.120.10 221 297 5.7E-18 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 Gene3D G3DSA:3.30.310.50 466 535 1.8E-15 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 PANTHER PTHR22573:SF54 18 535 2.1E-159 T 23-04-2016 SHYC_RS08855 cd7f3b27861d9343926c413fecdfb557 551 SUPERFAMILY SSF53738 294 438 1.33E-24 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS00375 49f9cd9b5e027502a7f4d8896bc440b9 257 PANTHER PTHR30502:SF0 3 248 2.7E-75 T 23-04-2016 SHYC_RS00375 49f9cd9b5e027502a7f4d8896bc440b9 257 SUPERFAMILY SSF51621 2 247 1.22E-66 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS00375 49f9cd9b5e027502a7f4d8896bc440b9 257 PANTHER PTHR30502 3 248 2.7E-75 T 23-04-2016 SHYC_RS00375 49f9cd9b5e027502a7f4d8896bc440b9 257 Gene3D G3DSA:3.20.20.60 5 247 3.2E-63 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS00375 49f9cd9b5e027502a7f4d8896bc440b9 257 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 197 6.8E-30 T 23-04-2016 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 SHYC_RS02350 df0bf88946e4f89cb978aec596585200 183 Gene3D G3DSA:3.40.630.30 1 149 9.0E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS02350 df0bf88946e4f89cb978aec596585200 183 Pfam PF00583 Acetyltransferase (GNAT) family 58 142 2.8E-8 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS02350 df0bf88946e4f89cb978aec596585200 183 SUPERFAMILY SSF55729 1 150 6.45E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS02350 df0bf88946e4f89cb978aec596585200 183 PANTHER PTHR23091 1 174 5.4E-36 T 23-04-2016 SHYC_RS02350 df0bf88946e4f89cb978aec596585200 183 PANTHER PTHR23091:SF259 1 174 5.4E-36 T 23-04-2016 SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 SUPERFAMILY SSF53187 10 191 3.01E-66 T 23-04-2016 SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 SUPERFAMILY SSF53187 292 379 3.01E-66 T 23-04-2016 SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 PIRSF PIRSF005962 1 382 2.0E-114 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 PANTHER PTHR11014:SF118 11 382 5.2E-140 T 23-04-2016 SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 9 365 8.3E-87 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 Pfam PF01546 Peptidase family M20/M25/M40 63 378 2.0E-34 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 Gene3D G3DSA:3.30.70.360 175 291 1.4E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 Gene3D G3DSA:3.40.630.10 292 379 4.1E-80 T 23-04-2016 SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 Gene3D G3DSA:3.40.630.10 9 172 4.1E-80 T 23-04-2016 SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 Pfam PF07687 Peptidase dimerisation domain 179 272 9.4E-8 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 SUPERFAMILY SSF55031 175 293 2.39E-18 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS07280 f8db4ff3b3e0f1a7484b9f11ede7f6fa 382 PANTHER PTHR11014 11 382 5.2E-140 T 23-04-2016 SHYC_RS11720 e9143e442710a55823edd00cb5e0a3bd 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 1.1E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS11720 e9143e442710a55823edd00cb5e0a3bd 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 1.1E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS11720 e9143e442710a55823edd00cb5e0a3bd 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 1.1E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS11720 e9143e442710a55823edd00cb5e0a3bd 142 Gene3D G3DSA:1.10.10.10 6 140 2.4E-40 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS11720 e9143e442710a55823edd00cb5e0a3bd 142 PANTHER PTHR33164 1 137 6.2E-28 T 23-04-2016 SHYC_RS11720 e9143e442710a55823edd00cb5e0a3bd 142 SMART SM00347 27 127 4.8E-25 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS11720 e9143e442710a55823edd00cb5e0a3bd 142 Pfam PF01047 MarR family 34 91 1.5E-17 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS11720 e9143e442710a55823edd00cb5e0a3bd 142 SUPERFAMILY SSF46785 7 140 1.53E-32 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Gene3D G3DSA:3.30.420.40 3 38 6.2E-59 T 23-04-2016 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Gene3D G3DSA:3.30.420.40 99 164 6.2E-59 T 23-04-2016 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 SUPERFAMILY SSF100920 354 510 8.89E-61 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Gene3D G3DSA:3.30.420.40 289 331 4.0E-36 T 23-04-2016 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Gene3D G3DSA:3.30.420.40 165 199 4.0E-36 T 23-04-2016 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PRINTS PR00301 70kDa heat shock protein signature 358 377 7.8E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PRINTS PR00301 70kDa heat shock protein signature 53 61 7.8E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PRINTS PR00301 70kDa heat shock protein signature 335 355 7.8E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PRINTS PR00301 70kDa heat shock protein signature 31 43 7.8E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PRINTS PR00301 70kDa heat shock protein signature 172 182 7.8E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PRINTS PR00301 70kDa heat shock protein signature 112 132 7.8E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PRINTS PR00301 70kDa heat shock protein signature 439 455 7.8E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PRINTS PR00301 70kDa heat shock protein signature 3 16 7.8E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PRINTS PR00301 70kDa heat shock protein signature 304 320 7.8E-78 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Gene3D G3DSA:2.60.34.10 360 501 8.8E-72 T 23-04-2016 IPR029047 Heat shock protein 70kD, peptide-binding domain SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Gene3D G3DSA:3.90.640.10 200 284 1.4E-29 T 23-04-2016 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PANTHER PTHR19375 2 607 0.0 T 23-04-2016 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Gene3D G3DSA:1.20.1270.10 502 573 7.4E-25 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 SUPERFAMILY SSF53067 160 351 4.13E-67 T 23-04-2016 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 23-04-2016 IPR018181 Heat shock protein 70, conserved site SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 SUPERFAMILY SSF53067 1 157 4.26E-57 T 23-04-2016 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 601 36.886 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Gene3D G3DSA:3.30.30.30 39 98 3.2E-16 T 23-04-2016 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 5.7E-284 T 23-04-2016 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 PANTHER PTHR19375:SF173 2 607 0.0 T 23-04-2016 SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Pfam PF00012 Hsp70 protein 4 77 2.9E-29 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 Pfam PF00012 Hsp70 protein 80 573 4.4E-220 T 23-04-2016 IPR013126 Heat shock protein 70 family SHYC_RS06440 bdd48b4b1c12b06bb2f62e8492f4d1d8 607 SUPERFAMILY SSF100934 477 575 5.49E-14 T 23-04-2016 IPR029048 Heat shock protein 70kD, C-terminal domain SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 Hamap MF_00551 Uridine kinase [udk]. 1 205 40.37 T 23-04-2016 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 Gene3D G3DSA:3.40.50.300 5 204 9.9E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 SUPERFAMILY SSF52540 5 196 2.08E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 6 191 1.3E-44 T 23-04-2016 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 PANTHER PTHR10285 6 204 1.4E-92 T 23-04-2016 SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 PRINTS PR00988 Uridine kinase signature 149 160 1.5E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 PRINTS PR00988 Uridine kinase signature 34 45 1.5E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 PRINTS PR00988 Uridine kinase signature 135 145 1.5E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 PRINTS PR00988 Uridine kinase signature 79 94 1.5E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 PRINTS PR00988 Uridine kinase signature 171 184 1.5E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 PRINTS PR00988 Uridine kinase signature 4 21 1.5E-35 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SHYC_RS06310 ccc82859d2f146cab0d5f97f133f90c1 208 TIGRFAM TIGR00235 udk: uridine kinase 3 204 7.6E-86 T 23-04-2016 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|UniPathway: UPA00574|UniPathway: UPA00579 SHYC_RS06105 d3b205c18726b63a77a3733bb82ca6be 420 Gene3D G3DSA:3.40.1190.10 2 293 7.3E-84 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS06105 d3b205c18726b63a77a3733bb82ca6be 420 SUPERFAMILY SSF53244 295 417 1.26E-21 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS06105 d3b205c18726b63a77a3733bb82ca6be 420 TIGRFAM TIGR01499 folC: bifunctional protein FolC 23 416 5.3E-112 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SHYC_RS06105 d3b205c18726b63a77a3733bb82ca6be 420 PIRSF PIRSF001563 1 420 8.1E-126 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SHYC_RS06105 d3b205c18726b63a77a3733bb82ca6be 420 Pfam PF08245 Mur ligase middle domain 44 267 4.0E-11 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS06105 d3b205c18726b63a77a3733bb82ca6be 420 PANTHER PTHR11136:SF0 1 414 1.0E-119 T 23-04-2016 SHYC_RS06105 d3b205c18726b63a77a3733bb82ca6be 420 PANTHER PTHR11136 1 414 1.0E-119 T 23-04-2016 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|UniPathway: UPA00850 SHYC_RS06105 d3b205c18726b63a77a3733bb82ca6be 420 Gene3D G3DSA:3.90.190.20 295 417 6.2E-23 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS06105 d3b205c18726b63a77a3733bb82ca6be 420 SUPERFAMILY SSF53623 1 293 6.51E-83 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 SUPERFAMILY SSF56808 6 226 1.83E-87 T 23-04-2016 IPR023674 Ribosomal protein L1-like SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 PIRSF PIRSF002155 1 227 1.3E-83 T 23-04-2016 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 1.4E-107 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 2.5E-54 T 23-04-2016 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 Gene3D G3DSA:3.40.50.790 69 159 1.3E-44 T 23-04-2016 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 23-04-2016 IPR023673 Ribosomal protein L1, conserved site SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 44.743 T 23-04-2016 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 Gene3D G3DSA:3.30.190.20 161 226 5.4E-47 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 Gene3D G3DSA:3.30.190.20 16 68 5.4E-47 T 23-04-2016 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich GO:0003723 SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 PANTHER PTHR23105 21 229 3.0E-86 T 23-04-2016 SHYC_RS10680 1afee2e5cacc4098659323d65b28b28a 232 PANTHER PTHR23105:SF5 21 229 3.0E-86 T 23-04-2016 SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 SUPERFAMILY SSF52467 188 351 3.14E-40 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 SUPERFAMILY SSF52518 2 178 8.34E-41 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 Gene3D G3DSA:3.40.50.1220 189 349 6.5E-39 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 SUPERFAMILY SSF52518 361 542 2.14E-56 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 Gene3D G3DSA:3.40.50.970 357 544 2.3E-59 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 PANTHER PTHR18968:SF124 3 549 1.5E-253 T 23-04-2016 SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 324 1.2E-29 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 421 440 - T 23-04-2016 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 PANTHER PTHR18968 3 549 1.5E-253 T 23-04-2016 SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 2.3E-38 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 Gene3D G3DSA:3.40.50.970 2 176 2.0E-50 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS04360 cdd833f3387c222cad6bc40e5bf946d1 581 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 384 530 3.1E-36 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHYC_RS11010 1f7d6036805af9e7c8c082bb033db985 179 Hamap MF_01469 Ribonuclease M5 [rnmV]. 3 178 30.407 T 23-04-2016 IPR004466 Ribonuclease M5 GO:0043822 SHYC_RS11010 1f7d6036805af9e7c8c082bb033db985 179 SMART SM00493 4 77 1.7E-5 T 23-04-2016 IPR006171 Toprim domain SHYC_RS11010 1f7d6036805af9e7c8c082bb033db985 179 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 175 1.8E-52 T 23-04-2016 IPR004466 Ribonuclease M5 GO:0043822 SHYC_RS11010 1f7d6036805af9e7c8c082bb033db985 179 PANTHER PTHR39156 1 175 4.7E-78 T 23-04-2016 SHYC_RS11010 1f7d6036805af9e7c8c082bb033db985 179 SUPERFAMILY SSF110455 1 112 1.36E-35 T 23-04-2016 SHYC_RS11010 1f7d6036805af9e7c8c082bb033db985 179 Pfam PF13331 Domain of unknown function (DUF4093) 91 175 2.7E-27 T 23-04-2016 IPR025156 Ribonuclease M5, C-terminal domain SHYC_RS11010 1f7d6036805af9e7c8c082bb033db985 179 Gene3D G3DSA:3.40.1360.20 1 121 3.4E-40 T 23-04-2016 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 PANTHER PTHR11596:SF5 40 398 2.1E-147 T 23-04-2016 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 PANTHER PTHR11596:SF5 426 474 2.1E-147 T 23-04-2016 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 PANTHER PTHR11596 40 398 2.1E-147 T 23-04-2016 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 PANTHER PTHR11596 426 474 2.1E-147 T 23-04-2016 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 Gene3D G3DSA:3.40.720.10 36 474 4.4E-128 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 PRINTS PR00113 Alkaline phosphatase signature 107 122 2.3E-43 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 PRINTS PR00113 Alkaline phosphatase signature 52 72 2.3E-43 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 PRINTS PR00113 Alkaline phosphatase signature 194 204 2.3E-43 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 PRINTS PR00113 Alkaline phosphatase signature 260 289 2.3E-43 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 PRINTS PR00113 Alkaline phosphatase signature 144 164 2.3E-43 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 SUPERFAMILY SSF53649 41 382 5.76E-125 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 SUPERFAMILY SSF53649 417 476 5.76E-125 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 Pfam PF00245 Alkaline phosphatase 53 470 2.8E-115 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 ProSitePatterns PS00123 Alkaline phosphatase active site. 107 115 - T 23-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01555 99023a838c115de42a6e859b0364e88d 479 SMART SM00098 53 476 2.3E-140 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS05290 302daf7d9cf274fe01180d310325fab7 192 Gene3D G3DSA:3.40.30.10 23 192 8.9E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS05290 302daf7d9cf274fe01180d310325fab7 192 Pfam PF13462 Thioredoxin 23 192 1.9E-25 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS05290 302daf7d9cf274fe01180d310325fab7 192 PANTHER PTHR13887 24 192 5.9E-18 T 23-04-2016 SHYC_RS05290 302daf7d9cf274fe01180d310325fab7 192 SUPERFAMILY SSF52833 14 191 1.0E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS05290 302daf7d9cf274fe01180d310325fab7 192 PANTHER PTHR13887:SF14 24 192 5.9E-18 T 23-04-2016 SHYC_RS11325 93ae7a2630f0e34c9d9850ec72fa26a2 104 PANTHER PTHR30561:SF0 1 103 3.1E-28 T 23-04-2016 SHYC_RS11325 93ae7a2630f0e34c9d9850ec72fa26a2 104 SUPERFAMILY SSF103481 4 102 4.71E-14 T 23-04-2016 SHYC_RS11325 93ae7a2630f0e34c9d9850ec72fa26a2 104 PANTHER PTHR30561 1 103 3.1E-28 T 23-04-2016 SHYC_RS11325 93ae7a2630f0e34c9d9850ec72fa26a2 104 Pfam PF00893 Small Multidrug Resistance protein 2 93 7.0E-23 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 Gene3D G3DSA:3.60.15.10 4 255 5.9E-59 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 SUPERFAMILY SSF52821 347 439 5.37E-22 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 Gene3D G3DSA:3.40.250.10 269 342 9.7E-5 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 SMART SM00450 350 445 8.9E-17 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 Gene3D G3DSA:3.40.250.10 343 439 9.4E-21 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 PANTHER PTHR11935:SF9 1 254 5.6E-90 T 23-04-2016 SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 SMART SM00849 12 195 3.1E-27 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 SUPERFAMILY SSF52821 236 342 1.83E-8 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 Pfam PF00753 Metallo-beta-lactamase superfamily 13 157 5.3E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 PANTHER PTHR11935 1 254 5.6E-90 T 23-04-2016 SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 SUPERFAMILY SSF56281 10 256 6.16E-50 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS01160 f32a07f5d0675cf021efc521462861f9 447 Pfam PF00581 Rhodanese-like domain 362 438 1.2E-10 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS06650 e6872d30f754701f21974a732b2eb2a2 207 PANTHER PTHR11935:SF8 1 206 1.2E-50 T 23-04-2016 SHYC_RS06650 e6872d30f754701f21974a732b2eb2a2 207 Gene3D G3DSA:3.60.15.10 7 202 6.3E-47 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06650 e6872d30f754701f21974a732b2eb2a2 207 SUPERFAMILY SSF56281 1 200 7.47E-49 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06650 e6872d30f754701f21974a732b2eb2a2 207 PANTHER PTHR11935 1 206 1.2E-50 T 23-04-2016 SHYC_RS06650 e6872d30f754701f21974a732b2eb2a2 207 SMART SM00849 12 190 5.9E-40 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06650 e6872d30f754701f21974a732b2eb2a2 207 Pfam PF00753 Metallo-beta-lactamase superfamily 9 190 4.7E-30 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 SMART SM00316 106 173 1.3E-9 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 SMART SM00316 192 262 8.0E-27 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 SMART SM00316 14 90 2.6E-15 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 SMART SM00316 277 348 1.0E-26 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 PANTHER PTHR10724:SF6 1 362 1.3E-88 T 23-04-2016 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 SUPERFAMILY SSF50249 107 187 6.52E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 PRINTS PR00681 Ribosomal protein S1 signature 128 145 2.2E-40 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 PRINTS PR00681 Ribosomal protein S1 signature 16 34 2.2E-40 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 PRINTS PR00681 Ribosomal protein S1 signature 292 311 2.2E-40 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 PRINTS PR00681 Ribosomal protein S1 signature 214 235 2.2E-40 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 PRINTS PR00681 Ribosomal protein S1 signature 111 127 2.2E-40 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 PRINTS PR00681 Ribosomal protein S1 signature 331 349 2.2E-40 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 PRINTS PR00681 Ribosomal protein S1 signature 157 177 2.2E-40 T 23-04-2016 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 SUPERFAMILY SSF50249 257 361 4.85E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 Gene3D G3DSA:2.40.50.140 101 175 3.5E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 Gene3D G3DSA:2.40.50.140 8 92 4.5E-18 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 Gene3D G3DSA:2.40.50.140 275 348 3.0E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 Gene3D G3DSA:2.40.50.140 194 274 2.2E-28 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 SUPERFAMILY SSF50249 10 115 6.94E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 PANTHER PTHR10724 1 362 1.3E-88 T 23-04-2016 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 Pfam PF00575 S1 RNA binding domain 277 348 8.3E-24 T 23-04-2016 IPR003029 S1 domain GO:0003676 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 Pfam PF00575 S1 RNA binding domain 192 262 1.6E-24 T 23-04-2016 IPR003029 S1 domain GO:0003676 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 Pfam PF00575 S1 RNA binding domain 14 81 9.0E-14 T 23-04-2016 IPR003029 S1 domain GO:0003676 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 Pfam PF00575 S1 RNA binding domain 107 173 2.2E-13 T 23-04-2016 IPR003029 S1 domain GO:0003676 SHYC_RS06950 f7f2646d52d26ae1e9c8d4cfc530cee0 394 SUPERFAMILY SSF50249 192 277 1.79E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09130 cd76079abfd1137dfbeabc610bf877bb 312 Gene3D G3DSA:3.40.50.300 3 257 3.9E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09130 cd76079abfd1137dfbeabc610bf877bb 312 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 267 2.7E-10 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SHYC_RS09130 cd76079abfd1137dfbeabc610bf877bb 312 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS09130 cd76079abfd1137dfbeabc610bf877bb 312 PANTHER PTHR24220:SF336 9 282 1.1E-148 T 23-04-2016 SHYC_RS09130 cd76079abfd1137dfbeabc610bf877bb 312 SUPERFAMILY SSF52540 7 253 4.33E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09130 cd76079abfd1137dfbeabc610bf877bb 312 SMART SM00382 37 239 3.1E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS09130 cd76079abfd1137dfbeabc610bf877bb 312 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 265 2.9E-8 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SHYC_RS09130 cd76079abfd1137dfbeabc610bf877bb 312 PANTHER PTHR24220 9 282 1.1E-148 T 23-04-2016 SHYC_RS09130 cd76079abfd1137dfbeabc610bf877bb 312 Pfam PF00005 ABC transporter 29 181 4.7E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 126 137 3.3E-21 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 3.3E-21 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 243 252 3.3E-21 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 255 278 3.3E-21 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PANTHER PTHR11405:SF16 1 289 2.5E-124 T 23-04-2016 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 Gene3D G3DSA:3.40.50.1370 1 135 4.8E-50 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PRINTS PR00101 Aspartate carbamoyltransferase signature 247 252 2.9E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PRINTS PR00101 Aspartate carbamoyltransferase signature 125 142 2.9E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 2.9E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PRINTS PR00101 Aspartate carbamoyltransferase signature 271 285 2.9E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PRINTS PR00101 Aspartate carbamoyltransferase signature 205 214 2.9E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 2.9E-35 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 291 37.028 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 Gene3D G3DSA:3.40.50.1370 136 269 2.7E-43 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 SUPERFAMILY SSF53671 1 289 4.19E-91 T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 287 8.3E-21 T 23-04-2016 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 139 7.4E-40 T 23-04-2016 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 PANTHER PTHR11405 1 289 2.5E-124 T 23-04-2016 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 23-04-2016 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 SHYC_RS08205 24f547302bcab12de9a636d0ef9bf2c1 291 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 289 5.1E-93 T 23-04-2016 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 Pfam PF01565 FAD binding domain 41 169 2.3E-27 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 205 303 1.4E-27 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 Gene3D G3DSA:3.90.78.10 232 306 1.0E-31 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 SUPERFAMILY SSF56176 9 199 1.55E-47 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 28 304 1.5E-72 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 311 93.126 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 Gene3D G3DSA:3.30.43.10 7 93 9.5E-34 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 PANTHER PTHR21071 5 311 6.0E-130 T 23-04-2016 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 SUPERFAMILY SSF56194 201 305 7.85E-38 T 23-04-2016 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 Gene3D G3DSA:3.30.465.10 94 231 2.1E-48 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SHYC_RS09800 9892f1244bca00d4dba5b10877af3d6a 311 PANTHER PTHR21071:SF4 5 311 6.0E-130 T 23-04-2016 SHYC_RS11050 231510e6087198cb272965f219397828 309 SUPERFAMILY SSF52540 4 178 3.93E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11050 231510e6087198cb272965f219397828 309 PANTHER PTHR11669 4 161 5.0E-40 T 23-04-2016 SHYC_RS11050 231510e6087198cb272965f219397828 309 PANTHER PTHR11669:SF8 4 161 5.0E-40 T 23-04-2016 SHYC_RS11050 231510e6087198cb272965f219397828 309 Gene3D G3DSA:3.40.50.300 4 149 3.2E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11050 231510e6087198cb272965f219397828 309 Pfam PF13177 DNA polymerase III, delta subunit 3 150 3.3E-43 T 23-04-2016 SHYC_RS02405 43b0cf17925c2849fead27544b7c11e1 153 Gene3D G3DSA:3.30.450.40 15 137 5.0E-14 T 23-04-2016 IPR029016 GAF domain-like SHYC_RS02405 43b0cf17925c2849fead27544b7c11e1 153 Pfam PF13185 GAF domain 18 123 3.1E-7 T 23-04-2016 IPR003018 GAF domain GO:0005515 SHYC_RS02405 43b0cf17925c2849fead27544b7c11e1 153 SUPERFAMILY SSF55781 15 130 5.67E-13 T 23-04-2016 IPR029016 GAF domain-like SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 Gene3D G3DSA:3.90.105.10 138 167 1.4E-16 T 23-04-2016 SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 SUPERFAMILY SSF53218 183 329 1.06E-38 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 182 320 3.7E-32 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 SUPERFAMILY SSF63867 334 407 1.23E-15 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 SUPERFAMILY SSF63882 9 180 1.7E-51 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 Gene3D G3DSA:2.170.190.11 51 137 3.2E-28 T 23-04-2016 SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 SMART SM00852 186 324 9.3E-37 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 PANTHER PTHR10192 3 407 3.1E-148 T 23-04-2016 SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 Gene3D G3DSA:2.40.340.10 339 406 7.7E-11 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 Pfam PF03454 MoeA C-terminal region (domain IV) 337 407 1.6E-16 T 23-04-2016 IPR005111 MoeA, C-terminal, domain IV GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 Gene3D G3DSA:3.40.980.10 168 338 3.7E-55 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 Pfam PF03453 MoeA N-terminal region (domain I and II) 13 173 1.7E-32 T 23-04-2016 IPR005110 MoeA, N-terminal and linker domain GO:0032324 MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02960 b9e8a7a2cc47fb6967c592b71d366cfc 419 Pfam PF00994 Probable molybdopterin binding domain 186 322 8.7E-25 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 4 84 7.8E-19 T 23-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 PANTHER PTHR12697 215 367 2.5E-22 T 23-04-2016 SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 Pfam PF13646 HEAT repeats 236 315 9.1E-12 T 23-04-2016 SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 Pfam PF13769 Virulence factor 108 187 4.2E-24 T 23-04-2016 IPR025989 Virulence factor domain SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 SUPERFAMILY SSF110836 1 83 3.4E-24 T 23-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 SMART SM00932 4 89 1.6E-18 T 23-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 Gene3D G3DSA:3.30.1370.70 2 84 7.7E-23 T 23-04-2016 IPR014824 Scaffold protein Nfu/NifU, N-terminal SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 SUPERFAMILY SSF48371 234 368 2.16E-23 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 Gene3D G3DSA:1.25.10.10 213 365 3.4E-23 T 23-04-2016 IPR011989 Armadillo-like helical SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 SMART SM00567 E-Z type HEAT repeats 277 306 0.004 T 23-04-2016 IPR004155 PBS lyase HEAT-like repeat SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 SMART SM00567 E-Z type HEAT repeats 246 275 3.6 T 23-04-2016 IPR004155 PBS lyase HEAT-like repeat SHYC_RS07130 b6940ce9d7433dc6382ea77ed875bd0b 371 SMART SM00567 E-Z type HEAT repeats 308 337 590.0 T 23-04-2016 IPR004155 PBS lyase HEAT-like repeat SHYC_RS04075 7272e9b3a46827949948d24f8fe95e8f 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 71 1.2E-12 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS04075 7272e9b3a46827949948d24f8fe95e8f 226 PANTHER PTHR11751 15 100 4.8E-14 T 23-04-2016 SHYC_RS04075 7272e9b3a46827949948d24f8fe95e8f 226 Gene3D G3DSA:1.20.120.530 83 214 1.5E-11 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SHYC_RS04075 7272e9b3a46827949948d24f8fe95e8f 226 Gene3D G3DSA:1.10.10.10 10 69 5.5E-15 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS04075 7272e9b3a46827949948d24f8fe95e8f 226 SUPERFAMILY SSF48008 83 214 4.18E-14 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SHYC_RS04075 7272e9b3a46827949948d24f8fe95e8f 226 SMART SM00895 84 214 1.7E-5 T 23-04-2016 IPR011711 GntR, C-terminal SHYC_RS04075 7272e9b3a46827949948d24f8fe95e8f 226 Pfam PF07729 FCD domain 84 202 2.6E-12 T 23-04-2016 IPR011711 GntR, C-terminal SHYC_RS04075 7272e9b3a46827949948d24f8fe95e8f 226 SUPERFAMILY SSF46785 11 78 1.0E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS04075 7272e9b3a46827949948d24f8fe95e8f 226 SMART SM00345 17 75 3.4E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 Pfam PF01556 DnaJ C terminal domain 119 336 1.7E-41 T 23-04-2016 IPR002939 Chaperone DnaJ, C-terminal SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 Gene3D G3DSA:2.60.260.20 260 337 7.8E-21 T 23-04-2016 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 Gene3D G3DSA:2.60.260.20 209 257 2.1E-24 T 23-04-2016 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 Gene3D G3DSA:2.60.260.20 110 135 2.1E-24 T 23-04-2016 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 372 39.994 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 PRINTS PR00625 DnaJ domain signature 41 61 4.9E-32 T 23-04-2016 IPR001623 DnaJ domain SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 PRINTS PR00625 DnaJ domain signature 61 80 4.9E-32 T 23-04-2016 IPR001623 DnaJ domain SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 PRINTS PR00625 DnaJ domain signature 7 25 4.9E-32 T 23-04-2016 IPR001623 DnaJ domain SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 PRINTS PR00625 DnaJ domain signature 25 40 4.9E-32 T 23-04-2016 IPR001623 DnaJ domain SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 Gene3D G3DSA:2.10.230.10 136 208 2.3E-19 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 SUPERFAMILY SSF46565 3 102 3.79E-37 T 23-04-2016 IPR001623 DnaJ domain SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 Pfam PF00226 DnaJ domain 5 66 2.0E-27 T 23-04-2016 IPR001623 DnaJ domain SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 SMART SM00271 4 61 2.3E-31 T 23-04-2016 IPR001623 DnaJ domain SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 SUPERFAMILY SSF57938 133 213 3.79E-18 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 PANTHER PTHR24078 3 362 4.9E-171 T 23-04-2016 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 SUPERFAMILY SSF49493 113 137 1.44E-21 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 SUPERFAMILY SSF49493 203 270 1.44E-21 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 Gene3D G3DSA:1.10.287.110 2 105 3.0E-39 T 23-04-2016 IPR001623 DnaJ domain SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 23-04-2016 IPR018253 DnaJ domain, conserved site SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 353 4.6E-138 T 23-04-2016 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 SUPERFAMILY SSF49493 262 347 4.58E-23 T 23-04-2016 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 PANTHER PTHR24078:SF190 3 362 4.9E-171 T 23-04-2016 SHYC_RS06445 028a3dc8fee14f9d8d10e67c1b0dc3fb 376 Pfam PF00684 DnaJ central domain 146 210 5.7E-13 T 23-04-2016 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 SHYC_RS03060 382a3ddf0c1b2014185804d75b2cf119 219 Gene3D G3DSA:2.40.30.10 166 218 1.9E-12 T 23-04-2016 SHYC_RS03060 382a3ddf0c1b2014185804d75b2cf119 219 Gene3D G3DSA:2.40.30.10 4 33 1.9E-12 T 23-04-2016 SHYC_RS03060 382a3ddf0c1b2014185804d75b2cf119 219 PANTHER PTHR11229 1 216 3.7E-108 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03060 382a3ddf0c1b2014185804d75b2cf119 219 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 215 39.404 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03060 382a3ddf0c1b2014185804d75b2cf119 219 SUPERFAMILY SSF50447 1 217 9.71E-77 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain SHYC_RS03060 382a3ddf0c1b2014185804d75b2cf119 219 ProSitePatterns PS00474 Ribosomal protein L3 signature. 110 133 - T 23-04-2016 IPR019926 Ribosomal protein L3, conserved site SHYC_RS03060 382a3ddf0c1b2014185804d75b2cf119 219 Pfam PF00297 Ribosomal protein L3 103 190 5.2E-13 T 23-04-2016 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03060 382a3ddf0c1b2014185804d75b2cf119 219 Gene3D G3DSA:4.10.960.10 85 165 3.8E-31 T 23-04-2016 SHYC_RS03060 382a3ddf0c1b2014185804d75b2cf119 219 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 212 1.8E-83 T 23-04-2016 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS05545 730b715a6d7862cad0b80df359f45030 121 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 5 113 1.1E-22 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SHYC_RS05545 730b715a6d7862cad0b80df359f45030 121 PANTHER PTHR28259 1 120 6.7E-31 T 23-04-2016 SHYC_RS05545 730b715a6d7862cad0b80df359f45030 121 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 118 17.269 T 23-04-2016 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 SHYC_RS08255 563c748c56bc6215b3d730b6679889f6 203 PANTHER PTHR35798 31 203 3.3E-31 T 23-04-2016 SHYC_RS08255 563c748c56bc6215b3d730b6679889f6 203 Pfam PF04472 Protein of unknown function (DUF552) 117 187 3.4E-27 T 23-04-2016 IPR007561 Cell division protein SepF/SepF-related GO:0000917 SHYC_RS08255 563c748c56bc6215b3d730b6679889f6 203 PANTHER PTHR35798:SF1 31 203 3.3E-31 T 23-04-2016 SHYC_RS08255 563c748c56bc6215b3d730b6679889f6 203 Hamap MF_01197 Cell division protein SepF [sepF]. 1 195 19.719 T 23-04-2016 IPR023052 Cell division protein SepF GO:0090529 SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 Pfam PF01546 Peptidase family M20/M25/M40 74 381 1.6E-31 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 PANTHER PTHR11014:SF104 1 392 3.0E-250 T 23-04-2016 SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 Gene3D G3DSA:3.30.70.360 184 299 2.0E-37 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 SUPERFAMILY SSF53187 4 199 4.96E-83 T 23-04-2016 SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 SUPERFAMILY SSF53187 300 390 4.96E-83 T 23-04-2016 SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 PANTHER PTHR11014 1 392 3.0E-250 T 23-04-2016 SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 375 4.4E-107 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 PIRSF PIRSF005962 1 392 8.4E-117 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 Pfam PF07687 Peptidase dimerisation domain 183 277 7.8E-11 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 SUPERFAMILY SSF55031 186 298 5.89E-27 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 Gene3D G3DSA:3.40.630.10 3 180 8.0E-98 T 23-04-2016 SHYC_RS00410 32a5b85e52b9b0049c8f3a024e3147f0 395 Gene3D G3DSA:3.40.630.10 300 390 8.0E-98 T 23-04-2016 SHYC_RS03595 a33006d72c7292fc72ffaf70b97837b0 84 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.6E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03595 a33006d72c7292fc72ffaf70b97837b0 84 PRINTS PR01249 Ribosomal protein L31 signature 45 60 4.6E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03595 a33006d72c7292fc72ffaf70b97837b0 84 PRINTS PR01249 Ribosomal protein L31 signature 60 78 4.6E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03595 a33006d72c7292fc72ffaf70b97837b0 84 SUPERFAMILY SSF143800 1 80 5.1E-24 T 23-04-2016 SHYC_RS03595 a33006d72c7292fc72ffaf70b97837b0 84 Pfam PF01197 Ribosomal protein L31 1 79 1.4E-27 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03595 a33006d72c7292fc72ffaf70b97837b0 84 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 3.2E-19 T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03595 a33006d72c7292fc72ffaf70b97837b0 84 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 23-04-2016 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03595 a33006d72c7292fc72ffaf70b97837b0 84 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 28.262 T 23-04-2016 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03595 a33006d72c7292fc72ffaf70b97837b0 84 PANTHER PTHR33280 1 80 1.9E-33 T 23-04-2016 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 Gene3D G3DSA:3.40.47.10 4 121 1.6E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 Gene3D G3DSA:3.40.47.10 189 260 1.6E-54 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 PIRSF PIRSF000429 1 380 9.0E-108 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 SUPERFAMILY SSF53901 4 259 8.29E-61 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 SUPERFAMILY SSF53901 263 378 3.58E-30 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 Pfam PF02803 Thiolase, C-terminal domain 264 378 7.4E-31 T 23-04-2016 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 Gene3D G3DSA:3.40.47.10 266 378 3.4E-47 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 Gene3D G3DSA:3.40.47.10 148 188 3.4E-47 T 23-04-2016 IPR016039 Thiolase-like GO:0003824|GO:0008152 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 PANTHER PTHR18919 1 380 2.2E-141 T 23-04-2016 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 ProSitePatterns PS00737 Thiolases signature 2. 328 344 - T 23-04-2016 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 Pfam PF00108 Thiolase, N-terminal domain 5 251 4.0E-54 T 23-04-2016 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 PANTHER PTHR18919:SF69 1 380 2.2E-141 T 23-04-2016 SHYC_RS10520 2d196aaedc5648cda8f66af0f2b421b7 380 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 377 4.5E-120 T 23-04-2016 IPR002155 Thiolase GO:0008152|GO:0016747 SHYC_RS06755 319864e735a72547f29c40df4cf2585a 446 PANTHER PTHR30008 1 446 7.9E-158 T 23-04-2016 SHYC_RS06755 319864e735a72547f29c40df4cf2585a 446 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 2 438 26.811 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SHYC_RS06755 319864e735a72547f29c40df4cf2585a 446 PANTHER PTHR30008:SF0 1 446 7.9E-158 T 23-04-2016 SHYC_RS06755 319864e735a72547f29c40df4cf2585a 446 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 6 344 7.8E-127 T 23-04-2016 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 SHYC_RS06755 319864e735a72547f29c40df4cf2585a 446 Pfam PF02601 Exonuclease VII, large subunit 123 435 4.3E-89 T 23-04-2016 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 SHYC_RS06755 319864e735a72547f29c40df4cf2585a 446 Pfam PF13742 OB-fold nucleic acid binding domain 5 100 3.6E-28 T 23-04-2016 IPR025824 OB-fold nucleic acid binding domain GO:0003676 SHYC_RS04175 ffb2849a2c7836eaee3dd134e3d25e7a 191 Hamap MF_01515 UPF0316 protein . 9 177 31.224 T 23-04-2016 IPR022930 Protein of unknown function UPF0316 SHYC_RS04175 ffb2849a2c7836eaee3dd134e3d25e7a 191 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 117 169 2.7E-8 T 23-04-2016 IPR019264 Domain of unknown function DUF2179 SHYC_RS04175 ffb2849a2c7836eaee3dd134e3d25e7a 191 PANTHER PTHR40060 6 190 1.1E-69 T 23-04-2016 SHYC_RS11600 8acade5d71eda601e91683da49a36f33 98 PANTHER PTHR21011 1 96 2.3E-26 T 23-04-2016 SHYC_RS11600 8acade5d71eda601e91683da49a36f33 98 SUPERFAMILY SSF54995 1 96 7.19E-32 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS11600 8acade5d71eda601e91683da49a36f33 98 Gene3D G3DSA:3.30.70.60 1 96 3.9E-34 T 23-04-2016 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 SHYC_RS11600 8acade5d71eda601e91683da49a36f33 98 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 96 23.022 T 23-04-2016 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS11600 8acade5d71eda601e91683da49a36f33 98 Pfam PF01250 Ribosomal protein S6 3 93 6.3E-27 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS11600 8acade5d71eda601e91683da49a36f33 98 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 95 8.4E-31 T 23-04-2016 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 SMART SM00874 410 478 4.0E-27 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 SUPERFAMILY SSF56037 208 402 3.66E-72 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 SUPERFAMILY SSF46955 412 482 1.28E-21 T 23-04-2016 IPR009061 Putative DNA-binding domain SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Pfam PF03483 B3/4 domain 221 392 9.9E-67 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Gene3D G3DSA:3.50.40.10 207 401 7.1E-83 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 SUPERFAMILY SSF55681 474 695 1.19E-50 T 23-04-2016 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 SUPERFAMILY SSF50249 39 197 6.12E-42 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 708 800 4.2E-26 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 PANTHER PTHR10947:SF0 2 800 8.2E-304 T 23-04-2016 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 PANTHER PTHR10947 2 800 8.2E-304 T 23-04-2016 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Pfam PF03484 tRNA synthetase B5 domain 412 478 2.5E-21 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Gene3D G3DSA:3.30.930.10 496 695 2.8E-66 T 23-04-2016 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Gene3D G3DSA:3.30.70.380 710 800 5.8E-27 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 SUPERFAMILY SSF54991 703 800 7.45E-27 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Gene3D G3DSA:3.30.56.10 161 190 7.5E-23 T 23-04-2016 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Gene3D G3DSA:3.30.56.10 1 38 7.5E-23 T 23-04-2016 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 SMART SM00873 220 393 7.1E-87 T 23-04-2016 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 SMART SM00896 708 800 2.6E-38 T 23-04-2016 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding GO:0000049|GO:0000287|GO:0004826|GO:0005524|GO:0006432|GO:0008033 KEGG: 00970+6.1.1.20 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Pfam PF01588 Putative tRNA binding domain 45 151 3.6E-23 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 9.2E-262 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Gene3D G3DSA:3.30.56.20 411 482 7.5E-27 T 23-04-2016 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20 SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Gene3D G3DSA:2.40.50.140 41 160 1.4E-44 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS08430 15f8a4dd1cf697627730c96eeb08348a 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 795 45.808 T 23-04-2016 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 SHYC_RS09780 efe32f855d7878c4cf6133b5c960eed0 370 Pfam PF02595 Glycerate kinase family 3 345 4.4E-59 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHYC_RS09780 efe32f855d7878c4cf6133b5c960eed0 370 PIRSF PIRSF006078 1 364 9.9E-56 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHYC_RS09780 efe32f855d7878c4cf6133b5c960eed0 370 PANTHER PTHR21599:SF0 1 366 6.2E-76 T 23-04-2016 SHYC_RS09780 efe32f855d7878c4cf6133b5c960eed0 370 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 351 2.1E-58 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHYC_RS09780 efe32f855d7878c4cf6133b5c960eed0 370 SUPERFAMILY SSF110738 1 358 1.16E-79 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHYC_RS09780 efe32f855d7878c4cf6133b5c960eed0 370 Gene3D G3DSA:3.90.1510.10 50 269 1.8E-42 T 23-04-2016 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 SHYC_RS09780 efe32f855d7878c4cf6133b5c960eed0 370 PANTHER PTHR21599 1 366 6.2E-76 T 23-04-2016 IPR004381 Glycerate kinase GO:0008887|GO:0031388 SHYC_RS06890 49397d01f839f91349a6e1bb6af743d0 181 PANTHER PTHR34298 11 176 7.8E-34 T 23-04-2016 SHYC_RS06890 49397d01f839f91349a6e1bb6af743d0 181 SUPERFAMILY SSF46785 79 150 1.82E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06890 49397d01f839f91349a6e1bb6af743d0 181 Gene3D G3DSA:1.10.10.10 6 83 3.2E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06890 49397d01f839f91349a6e1bb6af743d0 181 Pfam PF04079 Segregation and condensation complex subunit ScpB 8 158 8.5E-38 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SHYC_RS06890 49397d01f839f91349a6e1bb6af743d0 181 Gene3D G3DSA:1.10.10.10 84 150 1.6E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06890 49397d01f839f91349a6e1bb6af743d0 181 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 6 176 3.4E-35 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SHYC_RS06890 49397d01f839f91349a6e1bb6af743d0 181 PIRSF PIRSF019345 1 180 2.4E-36 T 23-04-2016 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 106 4.1E-28 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 SUPERFAMILY SSF56784 3 251 1.17E-65 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 Pfam PF13242 HAD-hyrolase-like 180 250 2.8E-17 T 23-04-2016 SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 Gene3D G3DSA:3.40.50.10410 77 179 7.1E-34 T 23-04-2016 IPR023215 Nitrophenylphosphatase-like domain SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 PANTHER PTHR19288:SF3 1 264 7.6E-96 T 23-04-2016 SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 PANTHER PTHR19288 1 264 7.6E-96 T 23-04-2016 SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 229 1.1E-41 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 Gene3D G3DSA:3.40.50.1000 180 257 8.1E-44 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 Gene3D G3DSA:3.40.50.1000 1 76 8.1E-44 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 250 4.1E-92 T 23-04-2016 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 SHYC_RS09385 4979e0ce8bdd69fcf438b7c3b37f469c 265 PIRSF PIRSF000915 1 259 1.5E-60 T 23-04-2016 IPR006357 HAD-superfamily hydrolase, subfamily IIA SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 SUPERFAMILY SSF52374 2 325 1.27E-90 T 23-04-2016 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 Pfam PF00579 tRNA synthetases class I (W and Y) 3 281 2.2E-82 T 23-04-2016 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 Gene3D G3DSA:3.40.50.620 2 203 9.5E-82 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 2.6E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 140 161 2.6E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 193 203 2.6E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 2.6E-24 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 326 41.007 T 23-04-2016 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 325 4.3E-112 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 PANTHER PTHR10055 1 329 2.1E-165 T 23-04-2016 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2|Reactome: REACT_71 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 Gene3D G3DSA:1.10.240.10 204 292 1.9E-18 T 23-04-2016 SHYC_RS09120 38174b9790be7e20da980c1e3e9a9613 330 PANTHER PTHR10055:SF10 1 329 2.1E-165 T 23-04-2016 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 6 159 4.9E-55 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 SUPERFAMILY SSF52374 5 158 7.04E-42 T 23-04-2016 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 Pfam PF01467 Cytidylyltransferase-like 8 135 2.3E-18 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 PANTHER PTHR21342 1 161 2.4E-76 T 23-04-2016 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 13 76 3.0E-4 T 23-04-2016 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 PANTHER PTHR21342:SF1 1 161 2.4E-76 T 23-04-2016 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 87 103 3.9E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 51 75 3.9E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 114 136 3.9E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 22 43 3.9E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 4 22 3.9E-47 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 Gene3D G3DSA:3.40.50.620 5 159 1.1E-51 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 4 160 33.554 T 23-04-2016 IPR001980 Coenzyme A biosynthesis protein GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|UniPathway: UPA00241 SHYC_RS08460 4319578f577c7536fdd3a559ccc61ad5 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 64 1.4E-14 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHYC_RS03635 f008f189e03c422acb1f73e9b8e42c99 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 3.0E-91 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SHYC_RS03635 f008f189e03c422acb1f73e9b8e42c99 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 3.3E-75 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS03635 f008f189e03c422acb1f73e9b8e42c99 209 Gene3D G3DSA:3.40.50.2020 3 209 9.8E-83 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS03635 f008f189e03c422acb1f73e9b8e42c99 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 47.707 T 23-04-2016 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183|UniPathway: UPA00574 SHYC_RS03635 f008f189e03c422acb1f73e9b8e42c99 209 SUPERFAMILY SSF53271 4 207 6.42E-71 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS03635 f008f189e03c422acb1f73e9b8e42c99 209 PANTHER PTHR10285 2 198 7.9E-97 T 23-04-2016 SHYC_RS06570 3e28f38ea310d7e4d1ed58a9549b895d 295 PANTHER PTHR30477 1 272 3.9E-140 T 23-04-2016 SHYC_RS06570 3e28f38ea310d7e4d1ed58a9549b895d 295 Pfam PF00950 ABC 3 transport family 8 266 4.2E-57 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SHYC_RS06570 3e28f38ea310d7e4d1ed58a9549b895d 295 Gene3D G3DSA:1.10.3470.10 48 275 2.0E-8 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS06570 3e28f38ea310d7e4d1ed58a9549b895d 295 PANTHER PTHR30477:SF14 1 272 3.9E-140 T 23-04-2016 SHYC_RS06570 3e28f38ea310d7e4d1ed58a9549b895d 295 SUPERFAMILY SSF81345 5 263 3.01E-30 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 179 688 9.2E-82 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 SUPERFAMILY SSF56784 406 425 5.5E-48 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 SUPERFAMILY SSF56784 466 708 5.5E-48 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 SUPERFAMILY SSF81665 157 210 1.15E-15 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 SUPERFAMILY SSF81665 307 401 1.15E-15 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 SUPERFAMILY SSF81665 657 703 1.15E-15 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 Gene3D G3DSA:3.30.70.100 1 55 3.0E-11 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 23-04-2016 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 Pfam PF00702 haloacid dehalogenase-like hydrolase 403 620 4.4E-36 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 SUPERFAMILY SSF55008 1 56 1.24E-10 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 Gene3D G3DSA:3.40.50.1000 382 421 7.6E-43 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 Gene3D G3DSA:3.40.50.1000 534 675 7.6E-43 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 Gene3D G3DSA:2.70.150.10 201 307 1.2E-25 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PANTHER PTHR24093 1 713 3.5E-234 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 Pfam PF00403 Heavy-metal-associated domain 5 54 3.5E-8 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 643 5.2E-21 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 607 626 5.2E-21 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 256 270 5.2E-21 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 554 564 5.2E-21 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 407 421 5.2E-21 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 Gene3D G3DSA:3.40.1110.10 422 533 1.1E-13 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 Pfam PF00122 E1-E2 ATPase 177 398 1.7E-63 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 SUPERFAMILY SSF81653 209 306 7.72E-24 T 23-04-2016 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00941 Cadmium-transporting ATPase signature 6 15 2.0E-48 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00941 Cadmium-transporting ATPase signature 120 137 2.0E-48 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00941 Cadmium-transporting ATPase signature 272 288 2.0E-48 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00941 Cadmium-transporting ATPase signature 191 211 2.0E-48 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00941 Cadmium-transporting ATPase signature 291 305 2.0E-48 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00941 Cadmium-transporting ATPase signature 39 62 2.0E-48 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00941 Cadmium-transporting ATPase signature 17 38 2.0E-48 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PRINTS PR00941 Cadmium-transporting ATPase signature 137 149 2.0E-48 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 156 710 5.2E-179 T 23-04-2016 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 409 415 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site SHYC_RS07720 9aa9c7ebedc7f6a7982e9ac31de3cf5b 716 PANTHER PTHR24093:SF317 1 713 3.5E-234 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 Pfam PF13481 AAA domain 63 220 1.6E-15 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 Pfam PF13541 Subunit ChlI of Mg-chelatase 345 428 1.3E-7 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 SUPERFAMILY SSF52540 66 292 1.32E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 Gene3D G3DSA:3.40.50.300 56 275 5.8E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 450 1.5E-200 T 23-04-2016 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 PANTHER PTHR32472 2 455 5.5E-220 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 SMART SM00382 89 242 4.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 Gene3D G3DSA:3.30.230.10 282 454 1.8E-33 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 PRINTS PR01874 DNA repair protein radA signature 211 239 5.6E-94 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 PRINTS PR01874 DNA repair protein radA signature 246 272 5.6E-94 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 PRINTS PR01874 DNA repair protein radA signature 122 139 5.6E-94 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 PRINTS PR01874 DNA repair protein radA signature 172 196 5.6E-94 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 PRINTS PR01874 DNA repair protein radA signature 320 343 5.6E-94 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 PRINTS PR01874 DNA repair protein radA signature 10 34 5.6E-94 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 PRINTS PR01874 DNA repair protein radA signature 81 109 5.6E-94 T 23-04-2016 SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 SUPERFAMILY SSF54211 301 455 3.79E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS10750 23a7aae051d1dffb877a73ede58d2cf3 457 SUPERFAMILY SSF54211 253 267 3.79E-40 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 SUPERFAMILY SSF46785 2 47 8.71E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 SUPERFAMILY SSF46785 86 140 1.05E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 PANTHER PTHR30185:SF4 1 645 1.3E-141 T 23-04-2016 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 SUPERFAMILY SSF63520 186 278 1.7E-12 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Pfam PF00874 PRD domain 298 387 2.8E-19 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Pfam PF00874 PRD domain 196 277 3.5E-10 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Pfam PF08279 HTH domain 5 53 3.8E-8 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Pfam PF08279 HTH domain 92 148 1.6E-9 T 23-04-2016 IPR013196 Helix-turn-helix, type 11 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 SUPERFAMILY SSF55804 502 640 2.49E-24 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 SUPERFAMILY SSF52794 399 477 3.92E-12 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Gene3D G3DSA:3.40.930.10 500 644 4.4E-33 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 506 642 7.6E-20 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Gene3D G3DSA:1.10.1790.10 186 278 3.3E-12 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Gene3D G3DSA:1.10.1790.10 292 391 2.9E-19 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 PANTHER PTHR30185 1 645 1.3E-141 T 23-04-2016 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 SUPERFAMILY SSF63520 292 391 2.88E-19 T 23-04-2016 IPR011608 PRD domain GO:0006355 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 401 467 1.5E-5 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Gene3D G3DSA:1.10.10.10 78 149 1.1E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Gene3D G3DSA:1.10.10.10 2 56 8.6E-11 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01250 ebf9b327b465d7aa3addda5f704347ca 650 Gene3D G3DSA:3.40.50.270 400 484 1.0E-12 T 23-04-2016 SHYC_RS03145 e412c1343cddfc5e957254c2125386fd 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 86 157 1.6E-32 T 23-04-2016 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 SHYC_RS03145 e412c1343cddfc5e957254c2125386fd 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 37.068 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHYC_RS03145 e412c1343cddfc5e957254c2125386fd 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 163 3.8E-71 T 23-04-2016 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHYC_RS03145 e412c1343cddfc5e957254c2125386fd 166 SUPERFAMILY SSF54211 79 159 1.11E-26 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS03145 e412c1343cddfc5e957254c2125386fd 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 1.8E-31 T 23-04-2016 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 SHYC_RS03145 e412c1343cddfc5e957254c2125386fd 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 23-04-2016 IPR018192 Ribosomal protein S5, N-terminal, conserved site SHYC_RS03145 e412c1343cddfc5e957254c2125386fd 166 Gene3D G3DSA:3.30.230.10 77 159 8.5E-34 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHYC_RS03145 e412c1343cddfc5e957254c2125386fd 166 Gene3D G3DSA:3.30.160.20 9 72 1.3E-32 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain SHYC_RS03145 e412c1343cddfc5e957254c2125386fd 166 PANTHER PTHR13718 10 164 2.7E-84 T 23-04-2016 IPR000851 Ribosomal protein S5 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03145 e412c1343cddfc5e957254c2125386fd 166 SUPERFAMILY SSF54768 7 76 1.26E-25 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 Pfam PF00702 haloacid dehalogenase-like hydrolase 290 515 5.3E-30 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 357 588 4.9E-46 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 64 330 2.3E-36 T 23-04-2016 IPR001757 P-type ATPase GO:0016021 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 Gene3D G3DSA:3.40.50.1000 429 548 3.6E-35 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 SUPERFAMILY SSF56784 379 552 1.27E-36 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 SUPERFAMILY SSF56784 293 311 1.27E-36 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 Pfam PF00122 E1-E2 ATPase 62 284 9.4E-47 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 295 301 - T 23-04-2016 IPR018303 P-type ATPase, phosphorylation site SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 Gene3D G3DSA:3.40.1110.10 304 428 7.5E-36 T 23-04-2016 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 1 664 37.137 T 23-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 PANTHER PTHR24093 1 572 5.4E-295 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 PANTHER PTHR24093 610 662 5.4E-295 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 SUPERFAMILY SSF81653 96 195 1.96E-25 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 PANTHER PTHR24093:SF49 1 572 5.4E-295 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 PANTHER PTHR24093:SF49 610 662 5.4E-295 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 661 3.1E-304 T 23-04-2016 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 Gene3D G3DSA:2.70.150.10 30 196 8.9E-31 T 23-04-2016 IPR008250 P-type ATPase, A domain GO:0000166|GO:0046872 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 448 458 2.8E-23 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 520 2.8E-23 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 293 307 2.8E-23 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 524 536 2.8E-23 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 142 156 2.8E-23 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 SUPERFAMILY SSF81665 32 95 3.14E-10 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 SUPERFAMILY SSF81665 558 585 3.14E-10 T 23-04-2016 SHYC_RS00325 4ca59e78e7741a26bd6aef3b8e01f5ee 664 SUPERFAMILY SSF81665 196 287 3.14E-10 T 23-04-2016 SHYC_RS07670 37d3cc31f2b1c05ef7282246c05e3a4b 177 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 5 177 3.5E-63 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 SHYC_RS07670 37d3cc31f2b1c05ef7282246c05e3a4b 177 PIRSF PIRSF016897 1 177 1.0E-63 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 SHYC_RS07670 37d3cc31f2b1c05ef7282246c05e3a4b 177 SUPERFAMILY SSF110391 5 177 6.67E-59 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 SHYC_RS07670 37d3cc31f2b1c05ef7282246c05e3a4b 177 Gene3D G3DSA:3.20.20.400 3 177 1.6E-66 T 23-04-2016 IPR006699 Glycerol-3-phosphate responsive antiterminator GO:0006355|GO:0009607 SHYC_RS07670 37d3cc31f2b1c05ef7282246c05e3a4b 177 PANTHER PTHR35787 5 177 5.6E-61 T 23-04-2016 SHYC_RS01955 4ad7bbf543834715472c27b8529eacf3 186 Gene3D G3DSA:2.70.70.10 46 173 1.4E-32 T 23-04-2016 SHYC_RS01955 4ad7bbf543834715472c27b8529eacf3 186 PANTHER PTHR21666 51 175 7.0E-26 T 23-04-2016 SHYC_RS01955 4ad7bbf543834715472c27b8529eacf3 186 SUPERFAMILY SSF51261 44 172 3.09E-36 T 23-04-2016 IPR011055 Duplicated hybrid motif SHYC_RS01955 4ad7bbf543834715472c27b8529eacf3 186 Pfam PF01551 Peptidase family M23 68 159 2.9E-25 T 23-04-2016 IPR016047 Peptidase M23 SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 354 2.8E-161 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 PANTHER PTHR11075:SF9 1 353 1.2E-173 T 23-04-2016 SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 Pfam PF00472 RF-1 domain 210 318 1.5E-41 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 Gene3D G3DSA:3.30.160.20 209 286 3.2E-32 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 354 40.187 T 23-04-2016 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 SUPERFAMILY SSF75620 8 350 7.72E-133 T 23-04-2016 SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 PANTHER PTHR11075 1 353 1.2E-173 T 23-04-2016 SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 SMART SM00937 63 177 1.1E-61 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 Pfam PF03462 PCRF domain 9 202 3.9E-72 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SHYC_RS03605 d214491065ae062a914d838bf3fbe4e6 358 Gene3D G3DSA:1.20.58.410 3 92 8.8E-21 T 23-04-2016 SHYC_RS04830 bb3e4accad5deecc1dbdb5a5ab77674e 402 SUPERFAMILY SSF56300 293 361 4.8E-12 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS04830 bb3e4accad5deecc1dbdb5a5ab77674e 402 SUPERFAMILY SSF56300 150 265 4.8E-12 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS04830 bb3e4accad5deecc1dbdb5a5ab77674e 402 Gene3D G3DSA:3.60.21.10 149 364 2.0E-8 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS04830 bb3e4accad5deecc1dbdb5a5ab77674e 402 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 149 368 1.7E-6 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SHYC_RS02970 a29a31b931d8b709c13161da9f51ae92 151 Pfam PF02391 MoaE protein 6 117 1.4E-35 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02970 a29a31b931d8b709c13161da9f51ae92 151 PANTHER PTHR23404 5 138 2.9E-75 T 23-04-2016 SHYC_RS02970 a29a31b931d8b709c13161da9f51ae92 151 Gene3D G3DSA:3.90.1170.40 3 138 1.5E-47 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02970 a29a31b931d8b709c13161da9f51ae92 151 SUPERFAMILY SSF54690 4 139 5.23E-44 T 23-04-2016 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|UniPathway: UPA00344 SHYC_RS02970 a29a31b931d8b709c13161da9f51ae92 151 PANTHER PTHR23404:SF10 5 138 2.9E-75 T 23-04-2016 SHYC_RS08685 2fe0932a637befff2e5226fdcd1010f2 392 Gene3D G3DSA:3.30.750.80 72 172 6.9E-26 T 23-04-2016 SHYC_RS08685 2fe0932a637befff2e5226fdcd1010f2 392 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 101 348 5.1E-27 T 23-04-2016 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 SHYC_RS08685 2fe0932a637befff2e5226fdcd1010f2 392 SUPERFAMILY SSF88697 1 67 2.73E-16 T 23-04-2016 IPR015947 PUA-like domain SHYC_RS08685 2fe0932a637befff2e5226fdcd1010f2 392 PANTHER PTHR11061:SF15 1 392 1.9E-136 T 23-04-2016 SHYC_RS08685 2fe0932a637befff2e5226fdcd1010f2 392 SUPERFAMILY SSF53335 78 385 5.16E-62 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS08685 2fe0932a637befff2e5226fdcd1010f2 392 PANTHER PTHR11061 1 392 1.9E-136 T 23-04-2016 SHYC_RS08685 2fe0932a637befff2e5226fdcd1010f2 392 Gene3D G3DSA:3.40.50.150 176 388 2.8E-43 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS03215 0666c0305d3d73348fbc860bb8d03a5c 276 Pfam PF01416 tRNA pseudouridine synthase 9 104 1.4E-8 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS03215 0666c0305d3d73348fbc860bb8d03a5c 276 Pfam PF01416 tRNA pseudouridine synthase 143 241 2.2E-26 T 23-04-2016 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS03215 0666c0305d3d73348fbc860bb8d03a5c 276 Gene3D G3DSA:3.30.70.660 107 242 1.2E-43 T 23-04-2016 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS03215 0666c0305d3d73348fbc860bb8d03a5c 276 PANTHER PTHR11142 1 243 2.8E-83 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS03215 0666c0305d3d73348fbc860bb8d03a5c 276 PIRSF PIRSF001430 1 255 2.3E-78 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS03215 0666c0305d3d73348fbc860bb8d03a5c 276 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 239 1.3E-65 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS03215 0666c0305d3d73348fbc860bb8d03a5c 276 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 244 33.329 T 23-04-2016 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS03215 0666c0305d3d73348fbc860bb8d03a5c 276 Gene3D G3DSA:3.30.70.580 1 105 4.3E-34 T 23-04-2016 IPR020094 Pseudouridine synthase I, TruA, N-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS03215 0666c0305d3d73348fbc860bb8d03a5c 276 SUPERFAMILY SSF55120 1 247 2.3E-81 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS08870 3e15d5e7e8bf29274540be9677e3bfb5 142 PANTHER PTHR13355:SF8 8 141 2.9E-43 T 23-04-2016 SHYC_RS08870 3e15d5e7e8bf29274540be9677e3bfb5 142 PANTHER PTHR13355 8 141 2.9E-43 T 23-04-2016 SHYC_RS08870 3e15d5e7e8bf29274540be9677e3bfb5 142 SUPERFAMILY SSF55729 5 140 2.96E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08870 3e15d5e7e8bf29274540be9677e3bfb5 142 Pfam PF13673 Acetyltransferase (GNAT) domain 20 139 6.9E-21 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS08870 3e15d5e7e8bf29274540be9677e3bfb5 142 Gene3D G3DSA:3.40.630.30 7 139 8.7E-39 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07350 a349353db5d8d07dbcdac87adfbfc50f 420 Gene3D G3DSA:3.30.1490.100 272 365 9.9E-9 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07350 a349353db5d8d07dbcdac87adfbfc50f 420 PANTHER PTHR11076 1 370 2.6E-184 T 23-04-2016 SHYC_RS07350 a349353db5d8d07dbcdac87adfbfc50f 420 PANTHER PTHR11076:SF31 1 370 2.6E-184 T 23-04-2016 SHYC_RS07350 a349353db5d8d07dbcdac87adfbfc50f 420 SUPERFAMILY SSF56672 10 250 1.25E-49 T 23-04-2016 SHYC_RS07350 a349353db5d8d07dbcdac87adfbfc50f 420 Gene3D G3DSA:3.30.70.270 77 172 1.2E-18 T 23-04-2016 SHYC_RS07350 a349353db5d8d07dbcdac87adfbfc50f 420 Gene3D G3DSA:1.10.150.20 179 251 3.0E-21 T 23-04-2016 SHYC_RS07350 a349353db5d8d07dbcdac87adfbfc50f 420 Pfam PF11798 IMS family HHH motif 181 213 7.9E-8 T 23-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07350 a349353db5d8d07dbcdac87adfbfc50f 420 SUPERFAMILY SSF100879 269 355 3.53E-9 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07350 a349353db5d8d07dbcdac87adfbfc50f 420 Pfam PF11799 impB/mucB/samB family C-terminal domain 258 362 1.5E-14 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07350 a349353db5d8d07dbcdac87adfbfc50f 420 Pfam PF00817 impB/mucB/samB family 15 165 2.0E-29 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 1.1E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.1E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.1E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 1.1E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 1.1E-35 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 240 1.1E-59 T 23-04-2016 SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 SUPERFAMILY SSF51735 8 242 3.36E-74 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PANTHER PTHR24322 151 182 1.2E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PANTHER PTHR24322 11 134 1.2E-47 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 2.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.2E-7 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS00390 6e30dbddd289e1adb719927d0eff7dbc 252 Gene3D G3DSA:3.40.50.720 2 243 8.4E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09380 2a22f5fceb4e5a57ea599b584cee3014 321 Gene3D G3DSA:3.40.50.720 114 287 8.2E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09380 2a22f5fceb4e5a57ea599b584cee3014 321 SUPERFAMILY SSF51735 101 288 6.92E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09380 2a22f5fceb4e5a57ea599b584cee3014 321 PANTHER PTHR10996:SF137 1 319 3.6E-118 T 23-04-2016 SHYC_RS09380 2a22f5fceb4e5a57ea599b584cee3014 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 287 1.1E-60 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHYC_RS09380 2a22f5fceb4e5a57ea599b584cee3014 321 SUPERFAMILY SSF52283 1 138 6.05E-34 T 23-04-2016 SHYC_RS09380 2a22f5fceb4e5a57ea599b584cee3014 321 PANTHER PTHR10996 1 319 3.6E-118 T 23-04-2016 SHYC_RS09380 2a22f5fceb4e5a57ea599b584cee3014 321 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SHYC_RS09380 2a22f5fceb4e5a57ea599b584cee3014 321 Gene3D G3DSA:3.40.50.720 2 113 4.2E-35 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09380 2a22f5fceb4e5a57ea599b584cee3014 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 319 8.0E-26 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SHYC_RS09890 4a5ac4ea78a465eb32fc14a789305e48 227 PANTHER PTHR34698:SF2 1 223 9.5E-63 T 23-04-2016 SHYC_RS09890 4a5ac4ea78a465eb32fc14a789305e48 227 SMART SM00796 1 209 1.2E-51 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SHYC_RS09890 4a5ac4ea78a465eb32fc14a789305e48 227 Gene3D G3DSA:3.30.1360.40 1 82 1.3E-12 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain SHYC_RS09890 4a5ac4ea78a465eb32fc14a789305e48 227 Pfam PF02682 Allophanate hydrolase subunit 1 1 208 2.1E-38 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SHYC_RS09890 4a5ac4ea78a465eb32fc14a789305e48 227 SUPERFAMILY SSF160467 2 98 4.97E-11 T 23-04-2016 SHYC_RS09890 4a5ac4ea78a465eb32fc14a789305e48 227 PANTHER PTHR34698 1 223 9.5E-63 T 23-04-2016 SHYC_RS09890 4a5ac4ea78a465eb32fc14a789305e48 227 Gene3D G3DSA:2.40.100.10 95 221 1.3E-30 T 23-04-2016 IPR029000 Cyclophilin-like domain SHYC_RS09890 4a5ac4ea78a465eb32fc14a789305e48 227 SUPERFAMILY SSF50891 96 220 4.93E-30 T 23-04-2016 IPR029000 Cyclophilin-like domain SHYC_RS08215 c3508bf20105a11668feef207fca2333 174 PANTHER PTHR11608 1 173 3.7E-81 T 23-04-2016 SHYC_RS08215 c3508bf20105a11668feef207fca2333 174 SUPERFAMILY SSF53271 4 169 1.98E-36 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS08215 c3508bf20105a11668feef207fca2333 174 Gene3D G3DSA:3.40.50.2020 3 167 4.5E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS08215 c3508bf20105a11668feef207fca2333 174 Pfam PF00156 Phosphoribosyl transferase domain 5 158 1.1E-20 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHYC_RS08215 c3508bf20105a11668feef207fca2333 174 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 3 174 33.307 T 23-04-2016 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 SHYC_RS05630 349848121e34fb5dc5b9234256544f20 136 Pfam PF01047 MarR family 35 93 1.9E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS05630 349848121e34fb5dc5b9234256544f20 136 Gene3D G3DSA:1.10.10.10 12 119 2.3E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS05630 349848121e34fb5dc5b9234256544f20 136 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 17 112 3.4E-24 T 23-04-2016 IPR010166 Accessory regulator, Staphylococcus GO:0006355 SHYC_RS05630 349848121e34fb5dc5b9234256544f20 136 SUPERFAMILY SSF46785 10 110 1.25E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03000 94b47b29aab5e1456caee3065fe881ae 254 Gene3D G3DSA:3.10.180.10 82 137 3.7E-4 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS03000 94b47b29aab5e1456caee3065fe881ae 254 Pfam PF13468 Glyoxalase-like domain 6 192 7.1E-29 T 23-04-2016 IPR025870 Glyoxalase-like domain SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 2.8E-15 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 2.8E-15 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 2.8E-15 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 2.8E-15 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 Gene3D G3DSA:3.20.20.70 5 292 2.4E-72 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 PANTHER PTHR12128 1 291 7.9E-136 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 PIRSF PIRSF001365 1 293 2.0E-54 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 Pfam PF00701 Dihydrodipicolinate synthetase family 5 290 2.8E-82 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 SMART SM01130 4 292 8.5E-67 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 293 49.041 T 23-04-2016 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|UniPathway: UPA00629 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 SUPERFAMILY SSF51569 5 291 9.11E-72 T 23-04-2016 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS02900 318f8d68c7b904e66aedcc8ce9fbaa8a 293 PANTHER PTHR12128:SF30 1 291 7.9E-136 T 23-04-2016 SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 Gene3D G3DSA:3.10.350.10 27 70 2.3E-17 T 23-04-2016 IPR018392 LysM domain SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 Gene3D G3DSA:3.10.350.10 89 134 3.6E-16 T 23-04-2016 IPR018392 LysM domain SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 PANTHER PTHR33308:SF2 22 249 1.1E-18 T 23-04-2016 SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 SUPERFAMILY SSF54106 90 133 1.83E-10 T 23-04-2016 IPR018392 LysM domain SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 PANTHER PTHR33308 22 249 1.1E-18 T 23-04-2016 SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 SUPERFAMILY SSF54106 27 70 2.35E-12 T 23-04-2016 IPR018392 LysM domain SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 SUPERFAMILY SSF54001 149 272 2.06E-16 T 23-04-2016 SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 Pfam PF01476 LysM domain 29 70 8.3E-15 T 23-04-2016 IPR018392 LysM domain SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 Pfam PF01476 LysM domain 91 133 1.2E-11 T 23-04-2016 IPR018392 LysM domain SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 Pfam PF05257 CHAP domain 166 248 1.5E-11 T 23-04-2016 IPR007921 CHAP domain SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 SMART SM00257 90 133 4.8E-14 T 23-04-2016 IPR018392 LysM domain SHYC_RS10135 ccb33aa13abb1836ff68c0e6652865b2 273 SMART SM00257 28 71 1.3E-14 T 23-04-2016 IPR018392 LysM domain SHYC_RS02875 0423312423cc205201f12f2355185620 115 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 10 113 6.4E-27 T 23-04-2016 IPR010166 Accessory regulator, Staphylococcus GO:0006355 SHYC_RS02875 0423312423cc205201f12f2355185620 115 Gene3D G3DSA:1.10.10.10 5 82 3.6E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02875 0423312423cc205201f12f2355185620 115 Pfam PF01047 MarR family 32 92 5.2E-6 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS02875 0423312423cc205201f12f2355185620 115 SUPERFAMILY SSF46785 7 112 1.39E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01125 f4ce8ab43c7ee27dd5af15c2f642cb39 221 PANTHER PTHR24220 3 217 5.0E-110 T 23-04-2016 SHYC_RS01125 f4ce8ab43c7ee27dd5af15c2f642cb39 221 PANTHER PTHR24220:SF431 3 217 5.0E-110 T 23-04-2016 SHYC_RS01125 f4ce8ab43c7ee27dd5af15c2f642cb39 221 SUPERFAMILY SSF52540 1 220 3.82E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01125 f4ce8ab43c7ee27dd5af15c2f642cb39 221 SMART SM00382 30 216 1.4E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS01125 f4ce8ab43c7ee27dd5af15c2f642cb39 221 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS01125 f4ce8ab43c7ee27dd5af15c2f642cb39 221 Gene3D G3DSA:3.40.50.300 1 220 6.3E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01125 f4ce8ab43c7ee27dd5af15c2f642cb39 221 Pfam PF00005 ABC transporter 22 168 4.2E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS05235 03cf25083de377390aecf6db4f9c6ccc 341 SUPERFAMILY SSF47240 4 330 1.17E-83 T 23-04-2016 IPR009078 Ferritin-like superfamily SHYC_RS05235 03cf25083de377390aecf6db4f9c6ccc 341 Pfam PF00268 Ribonucleotide reductase, small chain 11 288 2.0E-76 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SHYC_RS05235 03cf25083de377390aecf6db4f9c6ccc 341 PIRSF PIRSF000355 2 329 3.1E-80 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SHYC_RS05235 03cf25083de377390aecf6db4f9c6ccc 341 PANTHER PTHR23409 24 328 1.3E-67 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SHYC_RS05235 03cf25083de377390aecf6db4f9c6ccc 341 Gene3D G3DSA:1.10.620.20 6 292 1.6E-73 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SHYC_RS05235 03cf25083de377390aecf6db4f9c6ccc 341 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 99 115 - T 23-04-2016 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS05235 03cf25083de377390aecf6db4f9c6ccc 341 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 8 331 2.9E-127 T 23-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS11305 51a39f2e3e3c46b3a90b255d4deecc7e 270 PANTHER PTHR20881 3 261 1.5E-131 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS11305 51a39f2e3e3c46b3a90b255d4deecc7e 270 SUPERFAMILY SSF51621 3 260 1.22E-93 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS11305 51a39f2e3e3c46b3a90b255d4deecc7e 270 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 260 4.0E-94 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS11305 51a39f2e3e3c46b3a90b255d4deecc7e 270 Gene3D G3DSA:3.20.20.60 2 261 1.9E-102 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS11305 51a39f2e3e3c46b3a90b255d4deecc7e 270 PIRSF PIRSF000388 1 263 2.6E-95 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS11305 51a39f2e3e3c46b3a90b255d4deecc7e 270 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 260 39.016 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS11305 51a39f2e3e3c46b3a90b255d4deecc7e 270 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 256 5.8E-100 T 23-04-2016 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654|UniPathway: UPA00028 SHYC_RS07715 4709f66aaf654799b1a7e910c983ad06 263 Pfam PF13277 YmdB-like protein 4 254 3.0E-107 T 23-04-2016 IPR005235 Metallophosphoesterase, YmdB-like SHYC_RS07715 4709f66aaf654799b1a7e910c983ad06 263 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 262 8.3E-103 T 23-04-2016 IPR005235 Metallophosphoesterase, YmdB-like SHYC_RS07715 4709f66aaf654799b1a7e910c983ad06 263 Gene3D G3DSA:3.60.21.30 1 260 1.2E-113 T 23-04-2016 SHYC_RS07715 4709f66aaf654799b1a7e910c983ad06 263 PANTHER PTHR36303 2 263 8.6E-138 T 23-04-2016 SHYC_RS07715 4709f66aaf654799b1a7e910c983ad06 263 SUPERFAMILY SSF56300 1 254 1.36E-82 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS07715 4709f66aaf654799b1a7e910c983ad06 263 PANTHER PTHR36303:SF1 2 263 8.6E-138 T 23-04-2016 SHYC_RS07715 4709f66aaf654799b1a7e910c983ad06 263 PIRSF PIRSF004789 1 262 3.3E-102 T 23-04-2016 IPR005235 Metallophosphoesterase, YmdB-like SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 Gene3D G3DSA:1.10.150.280 764 799 5.9E-6 T 23-04-2016 SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 Pfam PF02811 PHP domain 4 159 2.0E-24 T 23-04-2016 IPR004013 PHP domain GO:0003824 SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 Pfam PF14579 Helix-hairpin-helix motif 740 827 1.7E-22 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 248 666 2.3E-169 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 SMART SM00481 3 70 9.0E-16 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 SUPERFAMILY SSF160975 764 811 2.48E-5 T 23-04-2016 SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 PANTHER PTHR32294 3 1050 0.0 T 23-04-2016 SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 Gene3D G3DSA:3.20.20.140 2 88 1.1E-11 T 23-04-2016 SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 SUPERFAMILY SSF89550 2 71 1.26E-8 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 PANTHER PTHR32294:SF0 3 1050 0.0 T 23-04-2016 SHYC_RS05925 5c00327e456377d1a89afdc1c3162646 1063 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 159 944 4.5E-259 T 23-04-2016 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05375 ae758c8212c2e237891a1e2c01cd568f 176 Gene3D G3DSA:3.30.70.900 71 140 4.6E-8 T 23-04-2016 SHYC_RS05375 ae758c8212c2e237891a1e2c01cd568f 176 SUPERFAMILY SSF54909 63 138 4.67E-8 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel SHYC_RS05375 ae758c8212c2e237891a1e2c01cd568f 176 PANTHER PTHR34474:SF3 1 176 3.3E-33 T 23-04-2016 SHYC_RS05375 ae758c8212c2e237891a1e2c01cd568f 176 PANTHER PTHR34474 1 176 3.3E-33 T 23-04-2016 SHYC_RS10960 f30a37170831cbcc67f9ac0fc1b34a21 189 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SHYC_RS10960 f30a37170831cbcc67f9ac0fc1b34a21 189 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 23-04-2016 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 SHYC_RS10960 f30a37170831cbcc67f9ac0fc1b34a21 189 PANTHER PTHR17224:SF1 1 185 2.5E-76 T 23-04-2016 SHYC_RS10960 f30a37170831cbcc67f9ac0fc1b34a21 189 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 177 36.737 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHYC_RS10960 f30a37170831cbcc67f9ac0fc1b34a21 189 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 185 3.5E-66 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHYC_RS10960 f30a37170831cbcc67f9ac0fc1b34a21 189 Pfam PF01195 Peptidyl-tRNA hydrolase 3 184 4.4E-60 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHYC_RS10960 f30a37170831cbcc67f9ac0fc1b34a21 189 Gene3D G3DSA:3.40.50.1470 1 186 6.2E-72 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHYC_RS10960 f30a37170831cbcc67f9ac0fc1b34a21 189 SUPERFAMILY SSF53178 1 185 6.02E-66 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHYC_RS10960 f30a37170831cbcc67f9ac0fc1b34a21 189 PANTHER PTHR17224 1 185 2.5E-76 T 23-04-2016 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 SHYC_RS07620 d7d6ddfb89b7fbfa79e42b39bdb22ebb 412 SUPERFAMILY SSF53383 44 390 5.57E-41 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS07620 d7d6ddfb89b7fbfa79e42b39bdb22ebb 412 Pfam PF06838 Methionine gamma-lyase 5 406 2.2E-197 T 23-04-2016 IPR009651 Putative methionine gamma-lyase SHYC_RS07620 d7d6ddfb89b7fbfa79e42b39bdb22ebb 412 PANTHER PTHR11808 22 400 1.1E-166 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS07620 d7d6ddfb89b7fbfa79e42b39bdb22ebb 412 Gene3D G3DSA:3.40.640.10 26 260 2.3E-37 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS07620 d7d6ddfb89b7fbfa79e42b39bdb22ebb 412 PANTHER PTHR11808:SF53 22 400 1.1E-166 T 23-04-2016 SHYC_RS03905 379797aa0c5d93db3cd49231f2cebaf1 349 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 342 4.7E-137 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SHYC_RS03905 379797aa0c5d93db3cd49231f2cebaf1 349 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 237 256 - T 23-04-2016 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SHYC_RS03905 379797aa0c5d93db3cd49231f2cebaf1 349 PANTHER PTHR11835:SF35 2 348 2.7E-177 T 23-04-2016 SHYC_RS03905 379797aa0c5d93db3cd49231f2cebaf1 349 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 339 2.8E-121 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SHYC_RS03905 379797aa0c5d93db3cd49231f2cebaf1 349 Gene3D G3DSA:3.40.718.10 3 336 1.1E-120 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SHYC_RS03905 379797aa0c5d93db3cd49231f2cebaf1 349 SMART SM01329 4 342 4.2E-166 T 23-04-2016 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 SHYC_RS03905 379797aa0c5d93db3cd49231f2cebaf1 349 PANTHER PTHR11835 2 348 2.7E-177 T 23-04-2016 IPR001804 Isocitrate and isopropylmalate dehydrogenases family GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: REACT_1046 SHYC_RS03905 379797aa0c5d93db3cd49231f2cebaf1 349 SUPERFAMILY SSF53659 1 345 3.6E-113 T 23-04-2016 SHYC_RS03905 379797aa0c5d93db3cd49231f2cebaf1 349 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 346 44.065 T 23-04-2016 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396|UniPathway: UPA00048 SHYC_RS03770 ebc107c3eaba0d39f9fcf59214914443 67 SUPERFAMILY SSF55008 1 66 2.09E-15 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHYC_RS03770 ebc107c3eaba0d39f9fcf59214914443 67 Gene3D G3DSA:3.30.70.100 3 66 9.3E-18 T 23-04-2016 SHYC_RS03770 ebc107c3eaba0d39f9fcf59214914443 67 PRINTS PR00944 Copper ion binding protein signature 15 28 7.4E-6 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHYC_RS03770 ebc107c3eaba0d39f9fcf59214914443 67 PRINTS PR00944 Copper ion binding protein signature 53 66 7.4E-6 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHYC_RS03770 ebc107c3eaba0d39f9fcf59214914443 67 PRINTS PR00944 Copper ion binding protein signature 3 15 7.4E-6 T 23-04-2016 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 SHYC_RS03770 ebc107c3eaba0d39f9fcf59214914443 67 Pfam PF00403 Heavy-metal-associated domain 5 65 2.1E-14 T 23-04-2016 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 SHYC_RS07195 d42637f0e5f329b3b18700a8c038d66d 225 Gene3D G3DSA:1.10.10.10 126 224 1.5E-33 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07195 d42637f0e5f329b3b18700a8c038d66d 225 SUPERFAMILY SSF46894 123 223 3.4E-31 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHYC_RS07195 d42637f0e5f329b3b18700a8c038d66d 225 PANTHER PTHR26402:SF578 2 225 7.0E-98 T 23-04-2016 SHYC_RS07195 d42637f0e5f329b3b18700a8c038d66d 225 SMART SM00448 2 112 1.1E-44 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS07195 d42637f0e5f329b3b18700a8c038d66d 225 Gene3D G3DSA:3.40.50.2300 2 125 8.5E-41 T 23-04-2016 SHYC_RS07195 d42637f0e5f329b3b18700a8c038d66d 225 Pfam PF00072 Response regulator receiver domain 4 112 4.5E-30 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS07195 d42637f0e5f329b3b18700a8c038d66d 225 PANTHER PTHR26402 2 225 7.0E-98 T 23-04-2016 SHYC_RS07195 d42637f0e5f329b3b18700a8c038d66d 225 SMART SM00862 148 223 9.3E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS07195 d42637f0e5f329b3b18700a8c038d66d 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 2.2E-27 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS07195 d42637f0e5f329b3b18700a8c038d66d 225 SUPERFAMILY SSF52172 1 124 3.42E-41 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS08265 566b6dd017e29670fe5d72448c3e453a 264 SUPERFAMILY SSF64438 8 262 1.07E-68 T 23-04-2016 IPR011324 Cytotoxic necrotizing factor-like, catalytic SHYC_RS08265 566b6dd017e29670fe5d72448c3e453a 264 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 27 261 1.3E-56 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SHYC_RS08265 566b6dd017e29670fe5d72448c3e453a 264 PANTHER PTHR30616 21 264 3.1E-71 T 23-04-2016 SHYC_RS08265 566b6dd017e29670fe5d72448c3e453a 264 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 36 262 2.3E-45 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SHYC_RS08265 566b6dd017e29670fe5d72448c3e453a 264 Gene3D G3DSA:3.60.140.10 10 262 1.4E-65 T 23-04-2016 IPR003730 Multi-copper polyphenol oxidoreductase, laccase SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 Hamap MF_01574 6-phospho-beta-galactosidase [lacG]. 1 467 66.138 T 23-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 Pfam PF00232 Glycosyl hydrolase family 1 2 464 1.9E-167 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 3.8E-24 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 3.8E-24 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 3.8E-24 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 411 428 3.8E-24 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 PRINTS PR00131 Glycosyl hydrolase family 1 signature 390 401 3.8E-24 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 PANTHER PTHR10353:SF62 285 467 0.0 T 23-04-2016 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 PANTHER PTHR10353:SF62 4 262 0.0 T 23-04-2016 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 SUPERFAMILY SSF51445 2 465 4.42E-158 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 Gene3D G3DSA:3.20.20.80 2 464 1.3E-150 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 TIGRFAM TIGR01233 lacG: 6-phospho-beta-galactosidase 2 467 4.0E-262 T 23-04-2016 IPR005928 6-phospho-beta-galactosidase GO:0019512|GO:0033920 KEGG: 00052+3.2.1.85|UniPathway: UPA00542 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 23-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 PANTHER PTHR10353 285 467 0.0 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 PANTHER PTHR10353 4 262 0.0 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS03290 a439da11c54868912d85a0be5f11cd3f 467 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 23-04-2016 IPR018120 Glycoside hydrolase family 1, active site SHYC_RS01575 5c255b577ec5d61e63c9154c4b9188a1 82 SUPERFAMILY SSF55729 11 81 3.49E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS01575 5c255b577ec5d61e63c9154c4b9188a1 82 Pfam PF00583 Acetyltransferase (GNAT) family 28 80 3.2E-10 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS01575 5c255b577ec5d61e63c9154c4b9188a1 82 Gene3D G3DSA:3.40.630.30 16 80 2.3E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS11475 3f2694e5f7b3e5fb494157b4a38ba4da 306 Pfam PF03595 Voltage-dependent anion channel 10 292 3.5E-15 T 23-04-2016 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 SHYC_RS11475 3f2694e5f7b3e5fb494157b4a38ba4da 306 PANTHER PTHR37955 1 302 1.7E-88 T 23-04-2016 SHYC_RS11475 3f2694e5f7b3e5fb494157b4a38ba4da 306 PANTHER PTHR37955:SF1 1 302 1.7E-88 T 23-04-2016 SHYC_RS07815 7b073748723673e60f3b5fde9dd806b7 305 SUPERFAMILY SSF55120 1 234 4.89E-78 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS07815 7b073748723673e60f3b5fde9dd806b7 305 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 304 19.024 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS07815 7b073748723673e60f3b5fde9dd806b7 305 PANTHER PTHR13767 2 304 2.3E-114 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS07815 7b073748723673e60f3b5fde9dd806b7 305 PANTHER PTHR13767:SF2 2 304 2.3E-114 T 23-04-2016 SHYC_RS07815 7b073748723673e60f3b5fde9dd806b7 305 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 179 2.7E-57 T 23-04-2016 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 SHYC_RS07815 7b073748723673e60f3b5fde9dd806b7 305 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 3 217 6.9E-77 T 23-04-2016 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS07815 7b073748723673e60f3b5fde9dd806b7 305 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 234 1.0E-11 T 23-04-2016 IPR032819 tRNA pseudouridylate synthase B, C-terminal SHYC_RS03655 e3722e437158158eb86981a2fe89a0c3 70 Hamap MF_01396 ATP synthase subunit c [atpH]. 2 70 17.106 T 23-04-2016 SHYC_RS03655 e3722e437158158eb86981a2fe89a0c3 70 SUPERFAMILY SSF81333 2 69 1.1E-19 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SHYC_RS03655 e3722e437158158eb86981a2fe89a0c3 70 Gene3D G3DSA:1.20.20.10 1 69 1.8E-28 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SHYC_RS03655 e3722e437158158eb86981a2fe89a0c3 70 PRINTS PR00124 ATP synthase C subunit signature 5 24 2.1E-19 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SHYC_RS03655 e3722e437158158eb86981a2fe89a0c3 70 PRINTS PR00124 ATP synthase C subunit signature 43 68 2.1E-19 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SHYC_RS03655 e3722e437158158eb86981a2fe89a0c3 70 PRINTS PR00124 ATP synthase C subunit signature 26 41 2.1E-19 T 23-04-2016 IPR000454 ATPase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 SHYC_RS03655 e3722e437158158eb86981a2fe89a0c3 70 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 23-04-2016 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site SHYC_RS03655 e3722e437158158eb86981a2fe89a0c3 70 PANTHER PTHR10031 2 69 1.7E-22 T 23-04-2016 SHYC_RS03655 e3722e437158158eb86981a2fe89a0c3 70 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 14 69 1.3E-22 T 23-04-2016 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHYC_RS03655 e3722e437158158eb86981a2fe89a0c3 70 Pfam PF00137 ATP synthase subunit C 4 66 1.6E-14 T 23-04-2016 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 SHYC_RS02325 2abdfad4261a098d3af16ed9692837f6 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS02325 2abdfad4261a098d3af16ed9692837f6 495 PANTHER PTHR11699 11 491 8.8E-263 T 23-04-2016 SHYC_RS02325 2abdfad4261a098d3af16ed9692837f6 495 Gene3D G3DSA:3.40.309.10 268 458 2.9E-68 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHYC_RS02325 2abdfad4261a098d3af16ed9692837f6 495 SUPERFAMILY SSF53720 6 488 1.15E-160 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHYC_RS02325 2abdfad4261a098d3af16ed9692837f6 495 Gene3D G3DSA:3.40.605.10 12 267 6.5E-88 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS02325 2abdfad4261a098d3af16ed9692837f6 495 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS02325 2abdfad4261a098d3af16ed9692837f6 495 Pfam PF00171 Aldehyde dehydrogenase family 22 483 8.3E-167 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS02325 2abdfad4261a098d3af16ed9692837f6 495 PANTHER PTHR11699:SF97 11 491 8.8E-263 T 23-04-2016 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 SMART SM00332 86 324 2.0E-5 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 SUPERFAMILY SSF101215 2 76 6.41E-11 T 23-04-2016 IPR017944 KaiA/RbsU helical domain GO:0006468 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 PANTHER PTHR21021:SF21 57 326 1.5E-97 T 23-04-2016 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 2 74 3.4E-12 T 23-04-2016 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 SUPERFAMILY SSF81606 124 325 3.01E-13 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 138 326 1.7E-45 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 SMART SM00331 111 326 6.3E-67 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 Gene3D G3DSA:1.10.1240.30 2 76 3.0E-11 T 23-04-2016 IPR017944 KaiA/RbsU helical domain GO:0006468 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 Gene3D G3DSA:3.60.40.10 238 325 8.2E-7 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 3 82 3.0E-10 T 23-04-2016 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 SHYC_RS03835 e3e2b38f347735ec88caf177b0e6726e 328 PANTHER PTHR21021 57 326 1.5E-97 T 23-04-2016 SHYC_RS05730 ea68eb78ab01f8fb2534c0444a40854d 199 Pfam PF14794 Domain of unknown function (DUF4479) 23 88 6.4E-13 T 23-04-2016 IPR027855 Domain of unknown function DUF4479 SHYC_RS05730 ea68eb78ab01f8fb2534c0444a40854d 199 PANTHER PTHR10947 92 196 1.3E-26 T 23-04-2016 SHYC_RS05730 ea68eb78ab01f8fb2534c0444a40854d 199 PANTHER PTHR10947:SF0 92 196 1.3E-26 T 23-04-2016 SHYC_RS05730 ea68eb78ab01f8fb2534c0444a40854d 199 Pfam PF01588 Putative tRNA binding domain 93 194 9.2E-26 T 23-04-2016 IPR002547 tRNA-binding domain GO:0000049 Reactome: REACT_71 SHYC_RS05730 ea68eb78ab01f8fb2534c0444a40854d 199 Gene3D G3DSA:3.30.1940.10 20 88 2.0E-14 T 23-04-2016 IPR027855 Domain of unknown function DUF4479 SHYC_RS05730 ea68eb78ab01f8fb2534c0444a40854d 199 SUPERFAMILY SSF50249 88 197 1.71E-32 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS05730 ea68eb78ab01f8fb2534c0444a40854d 199 Gene3D G3DSA:2.40.50.140 92 197 2.2E-41 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS04190 a0616ab82e9b7404be760313897c1939 100 PANTHER PTHR40080:SF1 1 98 2.4E-42 T 23-04-2016 SHYC_RS04190 a0616ab82e9b7404be760313897c1939 100 PANTHER PTHR40080 1 98 2.4E-42 T 23-04-2016 SHYC_RS04190 a0616ab82e9b7404be760313897c1939 100 Gene3D G3DSA:1.10.1270.10 1 98 1.9E-44 T 23-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 SHYC_RS04190 a0616ab82e9b7404be760313897c1939 100 SUPERFAMILY SSF48295 3 94 1.52E-30 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SHYC_RS04190 a0616ab82e9b7404be760313897c1939 100 Pfam PF01371 Trp repressor protein 9 94 1.5E-33 T 23-04-2016 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 SHYC_RS04190 a0616ab82e9b7404be760313897c1939 100 PIRSF PIRSF012508 1 100 1.4E-45 T 23-04-2016 IPR013368 TrpR homologue YerC/YecD SHYC_RS04190 a0616ab82e9b7404be760313897c1939 100 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 3.2E-48 T 23-04-2016 IPR013368 TrpR homologue YerC/YecD SHYC_RS01615 e5dc472b2c82ee0c8cc232c8dc163102 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 44.293 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SHYC_RS01615 e5dc472b2c82ee0c8cc232c8dc163102 252 SUPERFAMILY SSF51366 1 252 5.85E-74 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHYC_RS01615 e5dc472b2c82ee0c8cc232c8dc163102 252 PANTHER PTHR21235:SF2 1 252 3.2E-116 T 23-04-2016 SHYC_RS01615 e5dc472b2c82ee0c8cc232c8dc163102 252 PANTHER PTHR21235 1 252 3.2E-116 T 23-04-2016 SHYC_RS01615 e5dc472b2c82ee0c8cc232c8dc163102 252 Gene3D G3DSA:3.20.20.70 4 252 7.5E-93 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS01615 e5dc472b2c82ee0c8cc232c8dc163102 252 Pfam PF00977 Histidine biosynthesis protein 5 235 1.9E-80 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SHYC_RS01615 e5dc472b2c82ee0c8cc232c8dc163102 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 3.8E-101 T 23-04-2016 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 UniPathway: UPA00031 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 PANTHER PTHR22924 1 379 3.9E-98 T 23-04-2016 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 Pfam PF00175 Oxidoreductase NAD-binding domain 262 352 5.2E-9 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 Gene3D G3DSA:3.40.50.80 255 376 5.6E-25 T 23-04-2016 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 SUPERFAMILY SSF63380 146 253 3.58E-19 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 Gene3D G3DSA:1.10.490.10 2 142 2.5E-48 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 SUPERFAMILY SSF52343 255 375 4.85E-25 T 23-04-2016 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 Gene3D G3DSA:2.40.30.10 146 252 4.1E-23 T 23-04-2016 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 Pfam PF00042 Globin 9 102 5.1E-9 T 23-04-2016 IPR000971 Globin GO:0019825|GO:0020037 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 PANTHER PTHR22924:SF49 1 379 3.9E-98 T 23-04-2016 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 PRINTS PR00409 Phthalate dioxygenase reductase family signature 341 349 1.6E-6 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 PRINTS PR00409 Phthalate dioxygenase reductase family signature 261 280 1.6E-6 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 PRINTS PR00409 Phthalate dioxygenase reductase family signature 239 253 1.6E-6 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 SUPERFAMILY SSF46458 1 149 5.82E-39 T 23-04-2016 IPR009050 Globin-like SHYC_RS08770 04af30ebb12570f8640c8f0867d8f7a1 381 Pfam PF00970 Oxidoreductase FAD-binding domain 152 251 4.1E-8 T 23-04-2016 IPR008333 Oxidoreductase, FAD-binding domain SHYC_RS05320 ac2c09660f4b4504c58c14b75c2673ae 114 Hamap MF_01526 UPF0342 protein . 2 113 19.763 T 23-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA SHYC_RS05320 ac2c09660f4b4504c58c14b75c2673ae 114 Gene3D G3DSA:1.20.1500.10 1 112 2.3E-41 T 23-04-2016 IPR023378 YheA/YmcA-like domain SHYC_RS05320 ac2c09660f4b4504c58c14b75c2673ae 114 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 6 108 8.3E-26 T 23-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA SHYC_RS05320 ac2c09660f4b4504c58c14b75c2673ae 114 PANTHER PTHR41254 2 114 5.0E-43 T 23-04-2016 SHYC_RS05320 ac2c09660f4b4504c58c14b75c2673ae 114 SUPERFAMILY SSF158622 3 113 3.27E-36 T 23-04-2016 IPR023378 YheA/YmcA-like domain SHYC_RS09925 7516b3957243d45b141b37209ca32a9d 237 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 234 32.997 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SHYC_RS09925 7516b3957243d45b141b37209ca32a9d 237 PIRSF PIRSF000370 2 237 4.2E-51 T 23-04-2016 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SHYC_RS09925 7516b3957243d45b141b37209ca32a9d 237 Pfam PF13353 4Fe-4S single cluster domain 15 119 3.6E-10 T 23-04-2016 SHYC_RS09925 7516b3957243d45b141b37209ca32a9d 237 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 3 237 1.3E-110 T 23-04-2016 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703|UniPathway: UPA00391 SHYC_RS09925 7516b3957243d45b141b37209ca32a9d 237 Gene3D G3DSA:3.20.20.70 23 123 2.0E-14 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS09925 7516b3957243d45b141b37209ca32a9d 237 SUPERFAMILY SSF102114 23 122 3.92E-13 T 23-04-2016 SHYC_RS09925 7516b3957243d45b141b37209ca32a9d 237 PANTHER PTHR11228:SF6 1 227 4.1E-58 T 23-04-2016 SHYC_RS09925 7516b3957243d45b141b37209ca32a9d 237 Pfam PF04055 Radical SAM superfamily 28 123 6.8E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS09925 7516b3957243d45b141b37209ca32a9d 237 PANTHER PTHR11228 1 227 4.1E-58 T 23-04-2016 SHYC_RS00805 b83600392b17e28e36386ffde10ad279 313 PANTHER PTHR30177 15 305 7.2E-129 T 23-04-2016 SHYC_RS00805 b83600392b17e28e36386ffde10ad279 313 Gene3D G3DSA:3.40.190.10 249 305 6.5E-15 T 23-04-2016 SHYC_RS00805 b83600392b17e28e36386ffde10ad279 313 Gene3D G3DSA:3.40.190.10 32 146 2.0E-23 T 23-04-2016 SHYC_RS00805 b83600392b17e28e36386ffde10ad279 313 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 301 9.1E-54 T 23-04-2016 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 SHYC_RS00805 b83600392b17e28e36386ffde10ad279 313 Gene3D G3DSA:3.40.190.120 147 243 2.2E-39 T 23-04-2016 SHYC_RS00805 b83600392b17e28e36386ffde10ad279 313 SUPERFAMILY SSF53850 33 304 3.26E-60 T 23-04-2016 SHYC_RS00805 b83600392b17e28e36386ffde10ad279 313 PANTHER PTHR30177:SF9 15 305 7.2E-129 T 23-04-2016 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 PANTHER PTHR11846 4 426 1.5E-243 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 Gene3D G3DSA:1.10.300.10 100 194 7.9E-35 T 23-04-2016 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 428 203.221 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 23-04-2016 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 Gene3D G3DSA:3.40.440.10 195 264 1.1E-69 T 23-04-2016 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 Gene3D G3DSA:3.40.440.10 1 93 1.1E-69 T 23-04-2016 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 Gene3D G3DSA:3.90.170.10 265 422 2.8E-68 T 23-04-2016 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 Pfam PF00709 Adenylosuccinate synthetase 4 420 3.1E-176 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 23-04-2016 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|UniPathway: UPA00075 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 SMART SM00788 3 422 6.2E-283 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 SUPERFAMILY SSF52540 1 427 2.34E-172 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00150 9289ddd7d72addcdb87faa078d8d1a7f 428 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 424 9.0E-181 T 23-04-2016 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: REACT_1698|UniPathway: UPA00075 SHYC_RS03325 8155c2b63af7c1f4ceb6b2336d7781ce 336 Pfam PF01168 Alanine racemase, N-terminal domain 8 199 7.4E-14 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03325 8155c2b63af7c1f4ceb6b2336d7781ce 336 PANTHER PTHR30511 3 334 4.9E-26 T 23-04-2016 SHYC_RS03325 8155c2b63af7c1f4ceb6b2336d7781ce 336 Gene3D G3DSA:3.20.20.10 40 202 4.7E-9 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS03325 8155c2b63af7c1f4ceb6b2336d7781ce 336 SUPERFAMILY SSF51419 6 207 9.16E-20 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS03325 8155c2b63af7c1f4ceb6b2336d7781ce 336 PANTHER PTHR30511:SF3 3 334 4.9E-26 T 23-04-2016 SHYC_RS10025 ed4c9e1e6cd35e9b00f3ef9e3f08afa4 534 SMART SM00382 348 522 3.0E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS10025 ed4c9e1e6cd35e9b00f3ef9e3f08afa4 534 Gene3D G3DSA:1.20.1560.10 1 303 4.5E-26 T 23-04-2016 SHYC_RS10025 ed4c9e1e6cd35e9b00f3ef9e3f08afa4 534 PANTHER PTHR24221 1 523 2.4E-77 T 23-04-2016 SHYC_RS10025 ed4c9e1e6cd35e9b00f3ef9e3f08afa4 534 Pfam PF00664 ABC transporter transmembrane region 30 266 6.5E-12 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS10025 ed4c9e1e6cd35e9b00f3ef9e3f08afa4 534 Pfam PF00005 ABC transporter 340 475 1.3E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS10025 ed4c9e1e6cd35e9b00f3ef9e3f08afa4 534 SUPERFAMILY SSF90123 2 303 1.05E-32 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS10025 ed4c9e1e6cd35e9b00f3ef9e3f08afa4 534 PANTHER PTHR24221:SF261 1 523 2.4E-77 T 23-04-2016 SHYC_RS10025 ed4c9e1e6cd35e9b00f3ef9e3f08afa4 534 Gene3D G3DSA:3.40.50.300 321 529 1.3E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10025 ed4c9e1e6cd35e9b00f3ef9e3f08afa4 534 SUPERFAMILY SSF52540 316 529 1.92E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10025 ed4c9e1e6cd35e9b00f3ef9e3f08afa4 534 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 1.9E-7 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.9E-7 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.9E-7 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 Pfam PF00958 GMP synthase C terminal domain 423 512 7.8E-43 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 195 8.9E-83 T 23-04-2016 IPR004739 GMP synthase, N-terminal GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 Gene3D G3DSA:3.30.300.10 389 513 1.5E-50 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 Pfam PF03054 tRNA methyl transferase 220 249 2.4E-5 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 Gene3D G3DSA:3.40.50.620 214 388 1.4E-59 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 SUPERFAMILY SSF52402 188 406 1.17E-61 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 SUPERFAMILY SSF54810 393 513 3.92E-50 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PRINTS PR00097 Anthranilate synthase component II signature 81 92 8.6E-6 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PRINTS PR00097 Anthranilate synthase component II signature 54 63 8.6E-6 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PRINTS PR00097 Anthranilate synthase component II signature 168 181 8.6E-6 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 513 1.9E-153 T 23-04-2016 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 Pfam PF00117 Glutamine amidotransferase class-I 12 190 8.7E-47 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 SUPERFAMILY SSF52317 8 228 3.3E-57 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 513 54.833 T 23-04-2016 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|UniPathway: UPA00189 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PANTHER PTHR11922:SF2 1 510 4.7E-295 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 1.4E-6 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 1.4E-6 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 1.4E-6 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 PANTHER PTHR11922 1 510 4.7E-295 T 23-04-2016 SHYC_RS11490 a1c9d60e531c90492d7960454dff0100 513 Gene3D G3DSA:3.40.50.880 3 213 9.5E-68 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS01890 b1fddc30622e0725719d46ff4235d0b3 140 PANTHER PTHR31964:SF45 1 140 9.4E-12 T 23-04-2016 SHYC_RS01890 b1fddc30622e0725719d46ff4235d0b3 140 SUPERFAMILY SSF52402 1 140 5.27E-19 T 23-04-2016 SHYC_RS01890 b1fddc30622e0725719d46ff4235d0b3 140 Gene3D G3DSA:3.40.50.620 1 140 7.4E-19 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS01890 b1fddc30622e0725719d46ff4235d0b3 140 PANTHER PTHR31964 1 140 9.4E-12 T 23-04-2016 SHYC_RS01890 b1fddc30622e0725719d46ff4235d0b3 140 Pfam PF00582 Universal stress protein family 1 140 9.6E-14 T 23-04-2016 IPR006016 UspA GO:0006950 SHYC_RS01890 b1fddc30622e0725719d46ff4235d0b3 140 PRINTS PR01438 Universal stress protein signature 100 112 1.4E-7 T 23-04-2016 IPR006015 Universal stress protein A SHYC_RS01890 b1fddc30622e0725719d46ff4235d0b3 140 PRINTS PR01438 Universal stress protein signature 2 20 1.4E-7 T 23-04-2016 IPR006015 Universal stress protein A SHYC_RS01890 b1fddc30622e0725719d46ff4235d0b3 140 PRINTS PR01438 Universal stress protein signature 118 140 1.4E-7 T 23-04-2016 IPR006015 Universal stress protein A SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 Gene3D G3DSA:2.30.140.20 312 379 5.1E-28 T 23-04-2016 IPR015294 Penicillin-binding protein 4, C-terminal domain SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 SUPERFAMILY SSF69189 313 379 3.41E-21 T 23-04-2016 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 PANTHER PTHR21581 1 344 5.2E-81 T 23-04-2016 SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 Pfam PF09211 Domain of unknown function (DUF1958) 314 378 1.1E-27 T 23-04-2016 IPR015294 Penicillin-binding protein 4, C-terminal domain SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 PANTHER PTHR21581:SF11 1 344 5.2E-81 T 23-04-2016 SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 54 285 1.4E-50 T 23-04-2016 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 Gene3D G3DSA:3.40.710.10 54 310 7.9E-69 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 SUPERFAMILY SSF56601 1 312 1.46E-66 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 155 168 1.3E-13 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 128 145 1.3E-13 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SHYC_RS10240 26c1d94eb5d2f34d2ad40151e5076e01 426 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 71 82 1.3E-13 T 23-04-2016 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 Gene3D G3DSA:3.20.20.140 332 565 3.6E-47 T 23-04-2016 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 SUPERFAMILY SSF81301 153 314 5.49E-42 T 23-04-2016 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 Pfam PF14520 Helix-hairpin-helix domain 90 144 1.1E-6 T 23-04-2016 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 Pfam PF02811 PHP domain 335 476 1.6E-7 T 23-04-2016 IPR004013 PHP domain GO:0003824 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 PIRSF PIRSF005047 1 566 6.4E-223 T 23-04-2016 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 Gene3D G3DSA:3.30.460.10 137 253 2.8E-13 T 23-04-2016 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 180 199 9.9E-6 T 23-04-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 296 313 9.9E-6 T 23-04-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 55 72 9.9E-6 T 23-04-2016 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 SMART SM00483 1 314 4.2E-50 T 23-04-2016 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 Pfam PF14791 DNA polymerase beta thumb 254 314 4.6E-17 T 23-04-2016 IPR029398 DNA polymerase beta, thumb domain SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 Gene3D G3DSA:1.10.150.110 3 82 9.0E-19 T 23-04-2016 IPR027421 DNA polymerase family X lyase domain SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 Gene3D G3DSA:3.30.210.10 254 314 1.1E-22 T 23-04-2016 IPR029398 DNA polymerase beta, thumb domain SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 Pfam PF14716 Helix-hairpin-helix domain 4 67 1.9E-16 T 23-04-2016 IPR010996 DNA polymerase beta-like, N-terminal domain SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 SUPERFAMILY SSF89550 333 564 1.22E-47 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 SUPERFAMILY SSF47802 2 81 3.53E-18 T 23-04-2016 IPR010996 DNA polymerase beta-like, N-terminal domain SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 PRINTS PR00869 DNA-polymerase family X signature 193 201 3.6E-5 T 23-04-2016 IPR022312 DNA polymerase family X GO:0003677|GO:0034061 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 PRINTS PR00869 DNA-polymerase family X signature 295 313 3.6E-5 T 23-04-2016 IPR022312 DNA polymerase family X GO:0003677|GO:0034061 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 PRINTS PR00869 DNA-polymerase family X signature 179 193 3.6E-5 T 23-04-2016 IPR022312 DNA polymerase family X GO:0003677|GO:0034061 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 SMART SM00481 334 413 4.7E-12 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SHYC_RS08410 df47b3c2bae84a6677d46a87f26e90ce 569 PANTHER PTHR11276 4 318 5.2E-66 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:3.40.50.740 151 219 1.5E-71 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:3.40.50.740 926 968 1.5E-71 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:3.40.50.740 554 579 1.5E-71 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:3.40.50.740 105 114 1.5E-71 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:3.40.50.740 694 819 1.5E-71 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:3.40.50.740 632 661 1.5E-71 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:3.40.50.740 1022 1033 1.5E-71 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 6 1222 0.0 T 23-04-2016 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:2.40.40.20 1042 1221 3.4E-42 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 SMART SM00926 40 102 8.1E-5 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Pfam PF00384 Molybdopterin oxidoreductase 105 816 2.9E-155 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 45 63 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 SUPERFAMILY SSF50692 1070 1221 3.39E-46 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 6 37 3.2E-9 T 23-04-2016 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1112 1139 - T 23-04-2016 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:2.20.25.90 49 95 1.1E-29 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 SUPERFAMILY SSF53706 7 1051 0.0 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:3.40.228.10 220 333 1.8E-61 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Gene3D G3DSA:3.40.228.10 468 553 1.8E-61 T 23-04-2016 SHYC_RS02385 d948dfaba795b5e0200720300f7d5acb 1223 Pfam PF01568 Molydopterin dinucleotide binding domain 1074 1188 9.4E-22 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 Pfam PF13416 Bacterial extracellular solute-binding protein 49 314 9.8E-33 T 23-04-2016 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PANTHER PTHR30222:SF5 9 356 1.0E-108 T 23-04-2016 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PANTHER PTHR30222 9 356 1.0E-108 T 23-04-2016 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 255 274 9.0E-55 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 83 97 9.0E-55 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 300 326 9.0E-55 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 9.0E-55 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 56 77 9.0E-55 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 130 146 9.0E-55 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 99 112 9.0E-55 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 9.0E-55 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 40 56 9.0E-55 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 SUPERFAMILY SSF53850 34 355 1.78E-90 T 23-04-2016 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 PIRSF PIRSF019574 1 356 1.3E-128 T 23-04-2016 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 Gene3D G3DSA:3.40.190.10 33 139 2.7E-63 T 23-04-2016 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 Gene3D G3DSA:3.40.190.10 278 321 2.7E-63 T 23-04-2016 SHYC_RS08570 1b2a0e74585496c98ba5b8822114d376 356 Gene3D G3DSA:3.40.190.10 141 277 1.2E-14 T 23-04-2016 SHYC_RS06405 2e84a9cd2aec2fc655cda4080ee3e84f 685 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 157 324 1.7E-27 T 23-04-2016 IPR004477 ComEC/Rec2-related protein SHYC_RS06405 2e84a9cd2aec2fc655cda4080ee3e84f 685 SUPERFAMILY SSF56281 420 677 1.9E-41 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06405 2e84a9cd2aec2fc655cda4080ee3e84f 685 Gene3D G3DSA:3.60.15.10 422 656 6.8E-29 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06405 2e84a9cd2aec2fc655cda4080ee3e84f 685 PANTHER PTHR30619 133 671 3.5E-122 T 23-04-2016 SHYC_RS06405 2e84a9cd2aec2fc655cda4080ee3e84f 685 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 113 662 1.2E-74 T 23-04-2016 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 SHYC_RS06405 2e84a9cd2aec2fc655cda4080ee3e84f 685 Pfam PF03772 Competence protein 136 386 4.3E-38 T 23-04-2016 IPR004477 ComEC/Rec2-related protein SHYC_RS06405 2e84a9cd2aec2fc655cda4080ee3e84f 685 Pfam PF00753 Metallo-beta-lactamase superfamily 428 633 1.3E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06405 2e84a9cd2aec2fc655cda4080ee3e84f 685 SMART SM00849 430 635 1.5E-7 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS06405 2e84a9cd2aec2fc655cda4080ee3e84f 685 PANTHER PTHR30619:SF2 133 671 3.5E-122 T 23-04-2016 SHYC_RS07165 6fdec49d6f6e0a530b7baf249d860479 166 PANTHER PTHR30175 1 113 4.0E-44 T 23-04-2016 SHYC_RS07165 6fdec49d6f6e0a530b7baf249d860479 166 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 18 138 5.1E-47 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS07165 6fdec49d6f6e0a530b7baf249d860479 166 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 80 92 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS07165 6fdec49d6f6e0a530b7baf249d860479 166 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 17 141 1.3E-53 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS07165 6fdec49d6f6e0a530b7baf249d860479 166 Gene3D G3DSA:2.70.70.10 10 158 2.5E-62 T 23-04-2016 SHYC_RS07165 6fdec49d6f6e0a530b7baf249d860479 166 SUPERFAMILY SSF51261 9 157 1.26E-56 T 23-04-2016 IPR011055 Duplicated hybrid motif SHYC_RS10160 9743f7dedae1f061f971ec72224fd839 205 PANTHER PTHR37298 1 205 8.3E-73 T 23-04-2016 SHYC_RS10160 9743f7dedae1f061f971ec72224fd839 205 Pfam PF01865 Protein of unknown function DUF47 40 202 9.5E-23 T 23-04-2016 IPR018445 Putative phosphate transport regulator SHYC_RS10160 9743f7dedae1f061f971ec72224fd839 205 SUPERFAMILY SSF109755 17 196 2.49E-5 T 23-04-2016 SHYC_RS07230 11749c9d3d53da31c510e5e72e3b6c55 629 Gene3D G3DSA:3.40.50.410 438 624 1.5E-7 T 23-04-2016 IPR002035 von Willebrand factor, type A SHYC_RS07230 11749c9d3d53da31c510e5e72e3b6c55 629 SMART SM00327 434 625 1.1E-13 T 23-04-2016 IPR002035 von Willebrand factor, type A SHYC_RS07230 11749c9d3d53da31c510e5e72e3b6c55 629 PANTHER PTHR41248:SF1 4 629 3.7E-145 T 23-04-2016 SHYC_RS07230 11749c9d3d53da31c510e5e72e3b6c55 629 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 423 552 8.3E-7 T 23-04-2016 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376|UniPathway: UPA00148 SHYC_RS07230 11749c9d3d53da31c510e5e72e3b6c55 629 SUPERFAMILY SSF53300 437 624 4.15E-16 T 23-04-2016 IPR002035 von Willebrand factor, type A SHYC_RS07230 11749c9d3d53da31c510e5e72e3b6c55 629 PANTHER PTHR41248 4 629 3.7E-145 T 23-04-2016 SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 Gene3D G3DSA:3.40.50.300 674 737 5.7E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 PANTHER PTHR10887:SF284 269 587 1.1E-31 T 23-04-2016 SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 PANTHER PTHR10887:SF284 235 253 1.1E-31 T 23-04-2016 SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 PANTHER PTHR10887:SF284 685 746 1.1E-31 T 23-04-2016 SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 SUPERFAMILY SSF52540 199 473 7.23E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 Gene3D G3DSA:3.40.50.300 303 502 1.0E-31 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 Pfam PF13604 AAA domain 331 504 9.8E-31 T 23-04-2016 SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 SUPERFAMILY SSF52540 551 610 5.18E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 SUPERFAMILY SSF52540 637 745 5.18E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 SUPERFAMILY SSF52540 437 503 5.18E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 Pfam PF14490 Helix-hairpin-helix containing domain 157 244 2.3E-16 T 23-04-2016 IPR029493 RecD helicase-like helix-hairpin-helix domain SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 Pfam PF13538 UvrD-like helicase C-terminal domain 685 731 3.6E-8 T 23-04-2016 IPR027785 UvrD-like helicase C-terminal domain SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 PANTHER PTHR10887 269 587 1.1E-31 T 23-04-2016 SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 PANTHER PTHR10887 235 253 1.1E-31 T 23-04-2016 SHYC_RS04850 56f34a14369532c4881a622ef30009ab 759 PANTHER PTHR10887 685 746 1.1E-31 T 23-04-2016 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 1 588 3.6E-244 T 23-04-2016 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 4 454 1.1E-136 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 PANTHER PTHR13710 1 588 8.5E-234 T 23-04-2016 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 SMART SM00490 239 320 5.7E-27 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 SMART SM00956 402 502 5.2E-24 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 PANTHER PTHR13710:SF81 1 588 8.5E-234 T 23-04-2016 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 Pfam PF00270 DEAD/DEAH box helicase 16 178 6.8E-18 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 SUPERFAMILY SSF47819 514 593 8.94E-20 T 23-04-2016 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 SMART SM00341 515 595 1.4E-11 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 SUPERFAMILY SSF46785 393 503 3.94E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 SMART SM00487 10 207 2.2E-28 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 Gene3D G3DSA:3.40.50.300 2 195 3.9E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 Gene3D G3DSA:1.10.10.10 334 506 2.8E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 Pfam PF00271 Helicase conserved C-terminal domain 219 320 1.5E-18 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 Pfam PF16124 RecQ zinc-binding 332 394 2.5E-10 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 SUPERFAMILY SSF52540 53 340 1.18E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 Gene3D G3DSA:3.40.50.300 196 333 1.2E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 Gene3D G3DSA:1.10.150.80 518 589 6.1E-18 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 Pfam PF09382 RQC domain 399 504 6.6E-22 T 23-04-2016 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 SHYC_RS09865 ef8c22b64f9541e8ae2acc9fc9139196 596 Pfam PF00570 HRDC domain 520 585 2.6E-18 T 23-04-2016 IPR002121 HRDC domain GO:0003676|GO:0005622 SHYC_RS03360 fbfb1ccc7e3728afd3779b4ea5c3cabd 228 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 27 226 4.4E-53 T 23-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SHYC_RS03360 fbfb1ccc7e3728afd3779b4ea5c3cabd 228 PANTHER PTHR20855 27 228 8.6E-44 T 23-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SHYC_RS03360 fbfb1ccc7e3728afd3779b4ea5c3cabd 228 PANTHER PTHR20855:SF3 27 228 8.6E-44 T 23-04-2016 IPR005744 Hly-III GO:0016021|GO:0019835 SHYC_RS03360 fbfb1ccc7e3728afd3779b4ea5c3cabd 228 Pfam PF03006 Haemolysin-III related 26 221 9.7E-30 T 23-04-2016 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 SHYC_RS10385 fad2bede5b2120ab5cb97454f9cf07b8 293 Pfam PF01497 Periplasmic binding protein 41 269 2.2E-38 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHYC_RS10385 fad2bede5b2120ab5cb97454f9cf07b8 293 PANTHER PTHR30535 33 291 3.0E-54 T 23-04-2016 SHYC_RS10385 fad2bede5b2120ab5cb97454f9cf07b8 293 SUPERFAMILY SSF53807 37 291 1.33E-55 T 23-04-2016 SHYC_RS10385 fad2bede5b2120ab5cb97454f9cf07b8 293 Gene3D G3DSA:3.40.50.1980 38 158 3.6E-29 T 23-04-2016 SHYC_RS10385 fad2bede5b2120ab5cb97454f9cf07b8 293 Gene3D G3DSA:3.40.50.1980 161 291 8.7E-33 T 23-04-2016 SHYC_RS06385 8c892584f6a8eda851101d7885917fa1 118 SUPERFAMILY SSF81301 1 115 5.56E-38 T 23-04-2016 SHYC_RS06385 8c892584f6a8eda851101d7885917fa1 118 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 1.0E-24 T 23-04-2016 SHYC_RS06385 8c892584f6a8eda851101d7885917fa1 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 22.529 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SHYC_RS06385 8c892584f6a8eda851101d7885917fa1 118 PANTHER PTHR21043 1 107 1.9E-33 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SHYC_RS06385 8c892584f6a8eda851101d7885917fa1 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 4.2E-33 T 23-04-2016 IPR004394 Protein Iojap/ribosomal silencing factor RsfS SHYC_RS06385 8c892584f6a8eda851101d7885917fa1 118 Gene3D G3DSA:3.30.460.10 3 107 6.1E-35 T 23-04-2016 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 Gene3D G3DSA:1.10.260.40 2 53 4.5E-25 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.2E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.2E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 PANTHER PTHR30146 1 321 3.4E-94 T 23-04-2016 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 SUPERFAMILY SSF47413 1 59 6.11E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.3E-20 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 Gene3D G3DSA:3.40.50.2300 54 165 3.2E-32 T 23-04-2016 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 SMART SM00354 1 71 1.2E-35 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 SUPERFAMILY SSF53822 59 306 1.18E-53 T 23-04-2016 IPR028082 Periplasmic binding protein-like I SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 Gene3D G3DSA:3.40.50.2300 166 319 4.3E-33 T 23-04-2016 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 PANTHER PTHR30146:SF31 1 321 3.4E-94 T 23-04-2016 SHYC_RS01165 e7783ff4776846736de2578d1f700597 323 Pfam PF13377 Periplasmic binding protein-like domain 181 318 1.2E-25 T 23-04-2016 SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 PANTHER PTHR10073 4 647 5.0E-174 T 23-04-2016 SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 643 27.368 T 23-04-2016 IPR020667 DNA mismatch repair protein, MutL GO:0006298 SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 133 7.3E-12 T 23-04-2016 SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 Gene3D G3DSA:3.30.230.10 203 325 1.1E-40 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 Pfam PF08676 MutL C terminal dimerisation domain 460 603 1.7E-46 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 23-04-2016 IPR014762 DNA mismatch repair, conserved site SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 1.5E-37 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 SUPERFAMILY SSF54211 190 326 3.79E-37 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 SUPERFAMILY SSF118116 457 645 3.27E-55 T 23-04-2016 SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 SUPERFAMILY SSF55874 3 213 1.44E-51 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 1.8E-99 T 23-04-2016 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 SMART SM01340 208 326 7.4E-55 T 23-04-2016 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 SMART SM00853 461 603 5.0E-53 T 23-04-2016 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 SHYC_RS07675 2d71acd80755f8863e5805843dcbd655 647 Gene3D G3DSA:3.30.565.10 3 202 4.9E-71 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 PANTHER PTHR18901 2 205 5.1E-55 T 23-04-2016 SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 6.7E-6 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 141 161 6.7E-6 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 139 6.7E-6 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 92 105 6.7E-6 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 178 2.0E-33 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 Gene3D G3DSA:3.40.50.1000 1 16 2.4E-36 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 Gene3D G3DSA:3.40.50.1000 83 189 2.4E-36 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 PANTHER PTHR18901:SF34 2 205 5.1E-55 T 23-04-2016 SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 SUPERFAMILY SSF56784 1 206 1.73E-44 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS02740 c312c9cb0fcfec0f26791c5acdb88d9f 214 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 4 178 1.4E-16 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 Pfam PF00206 Lyase 11 340 4.0E-113 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 Gene3D G3DSA:1.20.200.10 137 414 3.5E-101 T 23-04-2016 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 PANTHER PTHR11444 1 461 1.4E-239 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 PANTHER PTHR11444:SF1 1 461 1.4E-239 T 23-04-2016 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 Gene3D G3DSA:1.10.275.10 2 136 4.5E-58 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 460 89.715 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 1.5E-35 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 1.5E-35 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 1.5E-35 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 1.5E-35 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 Gene3D G3DSA:1.10.40.30 415 461 1.3E-32 T 23-04-2016 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 1.2E-6 T 23-04-2016 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 1.2E-6 T 23-04-2016 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 PRINTS PR00145 Argininosuccinate lyase family signature 131 153 1.2E-6 T 23-04-2016 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 Pfam PF10415 Fumarase C C-terminus 406 459 3.6E-27 T 23-04-2016 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 SUPERFAMILY SSF48557 3 458 1.16E-151 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 SHYC_RS04620 0e7b187e03874f9841094ac331f3937c 461 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 458 2.5E-227 T 23-04-2016 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|UniPathway: UPA00223 SHYC_RS08985 ad55392c1903132aa88814ce311bb7c0 452 PANTHER PTHR32024:SF4 4 452 2.3E-246 T 23-04-2016 SHYC_RS08985 ad55392c1903132aa88814ce311bb7c0 452 PANTHER PTHR32024 4 452 2.3E-246 T 23-04-2016 SHYC_RS08985 ad55392c1903132aa88814ce311bb7c0 452 Pfam PF02386 Cation transport protein 42 434 8.1E-61 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SHYC_RS02295 40767807c7eb0e0aff93bb3ab95c554f 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 296 1.3E-29 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS02295 40767807c7eb0e0aff93bb3ab95c554f 297 PANTHER PTHR30465:SF2 4 297 2.2E-118 T 23-04-2016 SHYC_RS02295 40767807c7eb0e0aff93bb3ab95c554f 297 Gene3D G3DSA:1.10.3720.10 79 293 5.0E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS02295 40767807c7eb0e0aff93bb3ab95c554f 297 SUPERFAMILY SSF161098 81 281 1.96E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS02295 40767807c7eb0e0aff93bb3ab95c554f 297 PANTHER PTHR30465 4 297 2.2E-118 T 23-04-2016 SHYC_RS02295 40767807c7eb0e0aff93bb3ab95c554f 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 11 55 1.1E-11 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 10 636 4.7E-302 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 Pfam PF01751 Toprim domain 426 537 5.8E-17 T 23-04-2016 IPR006171 Toprim domain SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 36 177 2.3E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 Gene3D G3DSA:3.40.50.670 411 623 1.5E-97 T 23-04-2016 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 SMART SM00433 39 634 0.0 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PANTHER PTHR10169 3 633 2.8E-300 T 23-04-2016 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 SUPERFAMILY SSF55874 10 215 2.62E-71 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 Pfam PF00204 DNA gyrase B 228 397 2.1E-61 T 23-04-2016 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR01159 DNA gyrase subunit B signature 319 335 4.4E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR01159 DNA gyrase subunit B signature 594 606 4.4E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR01159 DNA gyrase subunit B signature 185 200 4.4E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR01159 DNA gyrase subunit B signature 381 401 4.4E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR01159 DNA gyrase subunit B signature 610 626 4.4E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR01159 DNA gyrase subunit B signature 367 381 4.4E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR01159 DNA gyrase subunit B signature 227 249 4.4E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR01159 DNA gyrase subunit B signature 200 213 4.4E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR01159 DNA gyrase subunit B signature 477 486 4.4E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR01159 DNA gyrase subunit B signature 10 20 4.4E-75 T 23-04-2016 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 SUPERFAMILY SSF54211 228 398 1.5E-58 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 630 1.3E-29 T 23-04-2016 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR00418 DNA topoisomerase II family signature 275 288 2.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR00418 DNA topoisomerase II family signature 511 528 2.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR00418 DNA topoisomerase II family signature 117 131 2.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR00418 DNA topoisomerase II family signature 427 441 2.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR00418 DNA topoisomerase II family signature 493 509 2.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR00418 DNA topoisomerase II family signature 39 54 2.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR00418 DNA topoisomerase II family signature 573 589 2.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR00418 DNA topoisomerase II family signature 531 543 2.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 PRINTS PR00418 DNA topoisomerase II family signature 74 87 2.8E-70 T 23-04-2016 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 7 640 93.447 T 23-04-2016 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 Gene3D G3DSA:3.30.230.10 227 399 1.4E-69 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 SMART SM00387 35 179 3.1E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 23-04-2016 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 SUPERFAMILY SSF56719 401 632 4.18E-92 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SHYC_RS00030 3f4175ecc93a0188635b60c966564978 640 Gene3D G3DSA:3.30.565.10 10 217 3.2E-90 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 PANTHER PTHR11075:SF6 1 327 7.7E-155 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 328 36.991 T 23-04-2016 IPR020853 Peptide chain release factor 2, bacterial GO:0005737|GO:0006415|GO:0016149 SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 207 223 - T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 Pfam PF03462 PCRF domain 2 180 8.8E-60 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 Pfam PF00472 RF-1 domain 191 300 3.7E-41 T 23-04-2016 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 327 4.2E-155 T 23-04-2016 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 SUPERFAMILY SSF75620 2 326 1.31E-132 T 23-04-2016 SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 Gene3D G3DSA:1.20.58.410 2 77 6.4E-17 T 23-04-2016 SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 Gene3D G3DSA:3.30.160.20 190 268 9.0E-36 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 PANTHER PTHR11075 1 327 7.7E-155 T 23-04-2016 SHYC_RS09710 2307f2f5a2af1f6ff41fafcdc4f9bc08 329 SMART SM00937 46 156 5.7E-56 T 23-04-2016 IPR005139 Peptide chain release factor GO:0005737|GO:0006415|GO:0016149 SHYC_RS11680 f8d8beae29f87cccb07ccd0dd880f08f 203 PANTHER PTHR31715 2 203 3.2E-115 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 SHYC_RS11680 f8d8beae29f87cccb07ccd0dd880f08f 203 SUPERFAMILY SSF52540 3 195 1.85E-34 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11680 f8d8beae29f87cccb07ccd0dd880f08f 203 PIRSF PIRSF005624 2 200 1.3E-47 T 23-04-2016 SHYC_RS11680 f8d8beae29f87cccb07ccd0dd880f08f 203 Gene3D G3DSA:3.40.50.300 5 194 1.2E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11680 f8d8beae29f87cccb07ccd0dd880f08f 203 Hamap MF_01389 Urease accessory protein UreG [ureG]. 2 200 44.925 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 SHYC_RS11680 f8d8beae29f87cccb07ccd0dd880f08f 203 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 175 1.3E-38 T 23-04-2016 IPR003495 CobW/HypB/UreG, nucleotide-binding domain SHYC_RS11680 f8d8beae29f87cccb07ccd0dd880f08f 203 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 4 199 8.3E-94 T 23-04-2016 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 69 503 8.5E-193 T 23-04-2016 SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 Pfam PF01938 TRAM domain 442 503 5.0E-13 T 23-04-2016 IPR002792 TRAM domain SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 Gene3D G3DSA:3.80.30.20 211 439 1.4E-80 T 23-04-2016 IPR023404 Radical SAM, alpha/beta horseshoe SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 67 504 70.246 T 23-04-2016 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 PANTHER PTHR11918 15 507 1.6E-198 T 23-04-2016 IPR023970 Methylthiotransferase/radical SAM-type protein SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 SUPERFAMILY SSF102114 199 435 6.41E-62 T 23-04-2016 SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 SMART SM00729 212 430 2.0E-63 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 Pfam PF04055 Radical SAM superfamily 216 386 2.0E-32 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 68 500 1.1E-157 T 23-04-2016 IPR005839 Methylthiotransferase GO:0016740|GO:0043412|GO:0051539 SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 216 236 - T 23-04-2016 IPR020612 Methylthiotransferase, conserved site GO:0051539 SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 PANTHER PTHR11918:SF43 15 507 1.6E-198 T 23-04-2016 SHYC_RS07695 a21646fb26e3216b7356d1fdc4bd83be 513 Pfam PF00919 Uncharacterized protein family UPF0004 69 169 3.2E-28 T 23-04-2016 IPR013848 Methylthiotransferase, N-terminal GO:0003824|GO:0009451|GO:0051539 SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 PANTHER PTHR10458 1 183 3.1E-88 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 SUPERFAMILY SSF56420 2 180 9.42E-59 T 23-04-2016 IPR023635 Peptide deformylase SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 Hamap MF_00163 Peptide deformylase [def]. 3 183 27.072 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 Pfam PF01327 Polypeptide deformylase 4 172 1.2E-44 T 23-04-2016 IPR023635 Peptide deformylase SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 PANTHER PTHR10458:SF8 1 183 3.1E-88 T 23-04-2016 SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 PIRSF PIRSF004749 2 183 5.2E-45 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 PRINTS PR01576 Peptide deformylase signature 141 170 2.4E-30 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 PRINTS PR01576 Peptide deformylase signature 109 120 2.4E-30 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 PRINTS PR01576 Peptide deformylase signature 122 140 2.4E-30 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 PRINTS PR01576 Peptide deformylase signature 47 76 2.4E-30 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 179 1.4E-43 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08625 a53bdbb2a8bce2b08a4a8d880a35f82e 183 Gene3D G3DSA:3.90.45.10 3 179 2.7E-53 T 23-04-2016 IPR023635 Peptide deformylase SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 Gene3D G3DSA:3.30.565.10 290 456 2.6E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 SMART SM00387 348 457 1.2E-30 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 1.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 415 1.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 455 1.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 436 1.4E-14 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 Gene3D G3DSA:1.10.287.130 230 289 5.6E-15 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 SMART SM00304 186 238 1.5E-9 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 303 4.2E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 PANTHER PTHR24423 180 456 5.3E-65 T 23-04-2016 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 SMART SM00388 239 304 4.0E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 456 1.3E-21 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 SUPERFAMILY SSF158472 186 235 1.07E-8 T 23-04-2016 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 SUPERFAMILY SSF47384 223 304 4.9E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 SUPERFAMILY SSF55874 294 456 2.49E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS02545 fbebfe030da99be3805b65708d0d70b0 457 Pfam PF00672 HAMP domain 167 234 6.3E-14 T 23-04-2016 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 SHYC_RS09545 4234e8038910b19ed6892cdbefde7520 77 Pfam PF03840 Preprotein translocase SecG subunit 4 74 9.4E-23 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SHYC_RS09545 4234e8038910b19ed6892cdbefde7520 77 PRINTS PR01651 Protein-export SecG membrane protein signature 56 77 7.8E-12 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SHYC_RS09545 4234e8038910b19ed6892cdbefde7520 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 7.8E-12 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SHYC_RS09545 4234e8038910b19ed6892cdbefde7520 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.8E-12 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SHYC_RS09545 4234e8038910b19ed6892cdbefde7520 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 2 76 3.9E-24 T 23-04-2016 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 SHYC_RS09545 4234e8038910b19ed6892cdbefde7520 77 PANTHER PTHR34182 2 76 1.8E-23 T 23-04-2016 SHYC_RS06560 a1cd620f4d689f7b366f7611525676a4 297 Gene3D G3DSA:3.20.20.150 1 275 1.9E-105 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SHYC_RS06560 a1cd620f4d689f7b366f7611525676a4 297 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 68 76 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SHYC_RS06560 a1cd620f4d689f7b366f7611525676a4 297 SUPERFAMILY SSF51658 1 294 6.42E-104 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SHYC_RS06560 a1cd620f4d689f7b366f7611525676a4 297 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 281 1.4E-100 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SHYC_RS06560 a1cd620f4d689f7b366f7611525676a4 297 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 212 228 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SHYC_RS06560 a1cd620f4d689f7b366f7611525676a4 297 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 174 181 - T 23-04-2016 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 SHYC_RS06560 a1cd620f4d689f7b366f7611525676a4 297 Hamap MF_00152 Probable endonuclease 4 [nfo]. 1 284 43.06 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SHYC_RS06560 a1cd620f4d689f7b366f7611525676a4 297 Pfam PF01261 Xylose isomerase-like TIM barrel 20 236 2.7E-40 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SHYC_RS06560 a1cd620f4d689f7b366f7611525676a4 297 SMART SM00518 2 284 1.8E-125 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SHYC_RS06560 a1cd620f4d689f7b366f7611525676a4 297 PANTHER PTHR21445 1 287 9.5E-100 T 23-04-2016 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 SHYC_RS07260 a68d0fa686359db7b21ece78fa872c9f 66 SUPERFAMILY SSF50249 1 65 5.61E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS07260 a68d0fa686359db7b21ece78fa872c9f 66 PRINTS PR00050 Cold shock protein signature 24 33 4.2E-20 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHYC_RS07260 a68d0fa686359db7b21ece78fa872c9f 66 PRINTS PR00050 Cold shock protein signature 4 19 4.2E-20 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHYC_RS07260 a68d0fa686359db7b21ece78fa872c9f 66 PRINTS PR00050 Cold shock protein signature 39 57 4.2E-20 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHYC_RS07260 a68d0fa686359db7b21ece78fa872c9f 66 PIRSF PIRSF002599 1 66 1.2E-25 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 SHYC_RS07260 a68d0fa686359db7b21ece78fa872c9f 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 23-04-2016 IPR019844 Cold-shock conserved site SHYC_RS07260 a68d0fa686359db7b21ece78fa872c9f 66 SMART SM00357 3 66 8.6E-31 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 SHYC_RS07260 a68d0fa686359db7b21ece78fa872c9f 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.0E-30 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHYC_RS07260 a68d0fa686359db7b21ece78fa872c9f 66 PANTHER PTHR11544 1 66 7.0E-40 T 23-04-2016 SHYC_RS07260 a68d0fa686359db7b21ece78fa872c9f 66 Gene3D G3DSA:2.40.50.140 1 64 1.5E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS11730 ba82b449172afd112bb5358591b54a66 206 PANTHER PTHR33798:SF2 1 204 1.4E-60 T 23-04-2016 SHYC_RS11730 ba82b449172afd112bb5358591b54a66 206 SUPERFAMILY SSF50475 2 200 2.45E-36 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SHYC_RS11730 ba82b449172afd112bb5358591b54a66 206 SMART SM00903 20 177 1.8E-10 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SHYC_RS11730 ba82b449172afd112bb5358591b54a66 206 Pfam PF01613 Flavin reductase like domain 23 167 2.5E-14 T 23-04-2016 IPR002563 Flavin reductase like domain GO:0010181 SHYC_RS11730 ba82b449172afd112bb5358591b54a66 206 PANTHER PTHR33798 1 204 1.4E-60 T 23-04-2016 SHYC_RS11730 ba82b449172afd112bb5358591b54a66 206 Gene3D G3DSA:2.30.110.10 15 193 1.3E-51 T 23-04-2016 IPR012349 FMN-binding split barrel GO:0010181|GO:0016491|GO:0055114 UniPathway: UPA00647 SHYC_RS10745 1142a486c8f919df40ec0aed7886d2aa 353 SUPERFAMILY SSF88723 161 284 4.41E-19 T 23-04-2016 IPR029060 PIN domain-like SHYC_RS10745 1142a486c8f919df40ec0aed7886d2aa 353 SMART SM00670 159 264 1.6E-5 T 23-04-2016 IPR002716 PIN domain SHYC_RS10745 1142a486c8f919df40ec0aed7886d2aa 353 PANTHER PTHR11603 1 353 1.0E-89 T 23-04-2016 SHYC_RS10745 1142a486c8f919df40ec0aed7886d2aa 353 Gene3D G3DSA:3.40.50.1010 161 286 2.8E-24 T 23-04-2016 IPR029060 PIN domain-like SHYC_RS10745 1142a486c8f919df40ec0aed7886d2aa 353 PANTHER PTHR11603:SF147 1 353 1.0E-89 T 23-04-2016 SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 SMART SM00861 315 480 4.3E-61 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 Gene3D G3DSA:3.40.50.920 492 621 1.0E-33 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 Pfam PF02779 Transketolase, pyrimidine binding domain 315 476 1.4E-36 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 PANTHER PTHR11624:SF20 16 210 9.5E-279 T 23-04-2016 SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 PANTHER PTHR11624:SF20 236 622 9.5E-279 T 23-04-2016 SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 4 277 1.6E-115 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 Pfam PF02780 Transketolase, C-terminal domain 492 609 1.6E-29 T 23-04-2016 IPR033248 Transketolase, C-terminal domain SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 PANTHER PTHR11624 16 210 9.5E-279 T 23-04-2016 IPR033247 Transketolase family SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 PANTHER PTHR11624 236 622 9.5E-279 T 23-04-2016 IPR033247 Transketolase family SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 622 43.426 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 Gene3D G3DSA:3.40.50.970 293 491 2.0E-64 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 Gene3D G3DSA:3.40.50.970 234 292 1.5E-51 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 Gene3D G3DSA:3.40.50.970 5 187 1.5E-51 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 SUPERFAMILY SSF52518 238 377 7.37E-71 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 SUPERFAMILY SSF52518 6 193 7.37E-71 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 ProSitePatterns PS00802 Transketolase signature 2. 421 437 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 SUPERFAMILY SSF52518 315 502 8.61E-52 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 SUPERFAMILY SSF52922 489 621 5.37E-31 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHYC_RS06770 7e195d7406a4dcc364ba964bc2f9b44a 622 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 615 6.1E-259 T 23-04-2016 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 Gene3D G3DSA:3.30.420.140 314 439 1.6E-48 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 Gene3D G3DSA:1.10.150.310 488 622 1.8E-40 T 23-04-2016 IPR023097 Tex RuvX-like domain SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 SUPERFAMILY SSF53098 311 458 2.81E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 SMART SM00316 641 712 2.6E-19 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 PANTHER PTHR10724 1 715 0.0 T 23-04-2016 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 Gene3D G3DSA:2.40.50.140 631 711 9.5E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 Gene3D G3DSA:1.10.10.650 3 109 4.3E-38 T 23-04-2016 IPR023319 Tex-like protein, HTH domain SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 SUPERFAMILY SSF158832 4 310 1.05E-103 T 23-04-2016 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 Pfam PF09371 Tex-like protein N-terminal domain 9 191 4.2E-62 T 23-04-2016 IPR018974 Tex-like protein, N-terminal SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 SUPERFAMILY SSF47781 459 545 1.78E-24 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 SUPERFAMILY SSF47781 549 623 2.16E-15 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 Pfam PF12836 Helix-hairpin-helix motif 480 544 6.1E-23 T 23-04-2016 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 SMART SM00732 315 413 5.6E-34 T 23-04-2016 IPR006641 YqgF/RNase H-like domain GO:0006139 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 Pfam PF16921 Tex protein YqgF-like domain 315 440 1.5E-54 T 23-04-2016 IPR032639 Tex protein, YqgF-like domain SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 PANTHER PTHR10724:SF1 1 715 0.0 T 23-04-2016 SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 SUPERFAMILY SSF50249 630 711 4.25E-21 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 Gene3D G3DSA:1.10.3500.10 440 487 6.4E-93 T 23-04-2016 IPR023323 Tex-like domain SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 Gene3D G3DSA:1.10.3500.10 110 311 6.4E-93 T 23-04-2016 IPR023323 Tex-like domain SHYC_RS03855 1f0007be409694b66c73f6abb997ce87 716 Pfam PF00575 S1 RNA binding domain 643 711 4.7E-14 T 23-04-2016 IPR003029 S1 domain GO:0003676 SHYC_RS08160 14be50ce738fb2576473259e4ce948f3 568 Pfam PF05670 Domain of unknown function (DUF814) 449 533 9.2E-27 T 23-04-2016 IPR008532 Domain of unknown function DUF814 SHYC_RS08160 14be50ce738fb2576473259e4ce948f3 568 PANTHER PTHR15239:SF1 1 400 3.6E-135 T 23-04-2016 SHYC_RS08160 14be50ce738fb2576473259e4ce948f3 568 PANTHER PTHR15239:SF1 417 556 3.6E-135 T 23-04-2016 SHYC_RS08160 14be50ce738fb2576473259e4ce948f3 568 Gene3D G3DSA:1.10.8.50 166 234 7.1E-26 T 23-04-2016 SHYC_RS08160 14be50ce738fb2576473259e4ce948f3 568 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 441 2.3E-139 T 23-04-2016 SHYC_RS08160 14be50ce738fb2576473259e4ce948f3 568 Gene3D G3DSA:2.30.310.10 1 165 2.7E-58 T 23-04-2016 SHYC_RS08160 14be50ce738fb2576473259e4ce948f3 568 Gene3D G3DSA:3.40.970.40 237 288 3.6E-20 T 23-04-2016 SHYC_RS08160 14be50ce738fb2576473259e4ce948f3 568 PANTHER PTHR15239 1 400 3.6E-135 T 23-04-2016 SHYC_RS08160 14be50ce738fb2576473259e4ce948f3 568 PANTHER PTHR15239 417 556 3.6E-135 T 23-04-2016 SHYC_RS00745 ea72d612246a7ba96038c56bbdef2505 242 SUPERFAMILY SSF52467 3 240 1.64E-73 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SHYC_RS00745 ea72d612246a7ba96038c56bbdef2505 242 PANTHER PTHR11085 1 240 3.5E-78 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 SHYC_RS00745 ea72d612246a7ba96038c56bbdef2505 242 Gene3D G3DSA:3.30.1600.10 125 168 1.8E-20 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain SHYC_RS00745 ea72d612246a7ba96038c56bbdef2505 242 Gene3D G3DSA:3.30.1600.10 34 76 1.8E-20 T 23-04-2016 IPR026591 Sirtuin family, catalytic core small domain SHYC_RS00745 ea72d612246a7ba96038c56bbdef2505 242 Pfam PF02146 Sir2 family 23 198 5.2E-50 T 23-04-2016 IPR003000 Sirtuin family GO:0070403 SHYC_RS00745 ea72d612246a7ba96038c56bbdef2505 242 Gene3D G3DSA:3.40.50.1220 87 124 4.0E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SHYC_RS00745 ea72d612246a7ba96038c56bbdef2505 242 Gene3D G3DSA:3.40.50.1220 3 33 4.0E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SHYC_RS00745 ea72d612246a7ba96038c56bbdef2505 242 Gene3D G3DSA:3.40.50.1220 174 240 4.0E-46 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SHYC_RS03610 43973a399f54bacaefc74bdb11a3e46a 280 PANTHER PTHR18895:SF64 24 277 5.4E-72 T 23-04-2016 SHYC_RS03610 43973a399f54bacaefc74bdb11a3e46a 280 Gene3D G3DSA:1.10.8.10 3 84 7.1E-13 T 23-04-2016 SHYC_RS03610 43973a399f54bacaefc74bdb11a3e46a 280 SUPERFAMILY SSF53335 5 273 7.76E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS03610 43973a399f54bacaefc74bdb11a3e46a 280 Gene3D G3DSA:3.40.50.150 86 277 1.2E-49 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS03610 43973a399f54bacaefc74bdb11a3e46a 280 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 24 273 1.0E-74 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SHYC_RS03610 43973a399f54bacaefc74bdb11a3e46a 280 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 6 273 3.2E-59 T 23-04-2016 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 SHYC_RS03610 43973a399f54bacaefc74bdb11a3e46a 280 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHYC_RS03610 43973a399f54bacaefc74bdb11a3e46a 280 PANTHER PTHR18895 24 277 5.4E-72 T 23-04-2016 SHYC_RS03610 43973a399f54bacaefc74bdb11a3e46a 280 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 277 35.679 T 23-04-2016 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 SHYC_RS03610 43973a399f54bacaefc74bdb11a3e46a 280 Pfam PF05175 Methyltransferase small domain 101 191 1.9E-14 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SHYC_RS09750 55fa11acc7b0624908f10e6424fca214 388 Gene3D G3DSA:3.10.500.10 32 203 4.0E-61 T 23-04-2016 IPR028076 Staphopain proregion SHYC_RS09750 55fa11acc7b0624908f10e6424fca214 388 ProSitePatterns PS00639 Eukaryotic thiol (cysteine) proteases histidine active site. 332 342 - T 23-04-2016 IPR025660 Cysteine peptidase, histidine active site SHYC_RS09750 55fa11acc7b0624908f10e6424fca214 388 Pfam PF14731 Staphopain proregion 38 203 8.4E-66 T 23-04-2016 IPR028076 Staphopain proregion SHYC_RS09750 55fa11acc7b0624908f10e6424fca214 388 SUPERFAMILY SSF54001 218 388 4.07E-88 T 23-04-2016 SHYC_RS09750 55fa11acc7b0624908f10e6424fca214 388 Gene3D G3DSA:3.90.70.10 210 388 7.8E-70 T 23-04-2016 SHYC_RS09750 55fa11acc7b0624908f10e6424fca214 388 Pfam PF05543 Staphopain peptidase C47 216 388 1.7E-90 T 23-04-2016 IPR008750 Staphopain peptidase C47 GO:0006508|GO:0008234 SHYC_RS09750 55fa11acc7b0624908f10e6424fca214 388 SUPERFAMILY SSF54403 38 204 3.23E-57 T 23-04-2016 SHYC_RS09850 56c23f5ff5207630590023bdf8f8a182 349 Gene3D G3DSA:3.90.1150.10 261 348 2.6E-12 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS09850 56c23f5ff5207630590023bdf8f8a182 349 PANTHER PTHR11751:SF366 9 349 2.0E-136 T 23-04-2016 SHYC_RS09850 56c23f5ff5207630590023bdf8f8a182 349 Pfam PF00155 Aminotransferase class I and II 34 338 4.5E-46 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHYC_RS09850 56c23f5ff5207630590023bdf8f8a182 349 SUPERFAMILY SSF53383 28 349 2.06E-71 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS09850 56c23f5ff5207630590023bdf8f8a182 349 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 218 227 - T 23-04-2016 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 SHYC_RS09850 56c23f5ff5207630590023bdf8f8a182 349 Gene3D G3DSA:3.40.640.10 42 260 1.4E-65 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS09850 56c23f5ff5207630590023bdf8f8a182 349 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 1 346 53.284 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SHYC_RS09850 56c23f5ff5207630590023bdf8f8a182 349 PANTHER PTHR11751 9 349 2.0E-136 T 23-04-2016 SHYC_RS09850 56c23f5ff5207630590023bdf8f8a182 349 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 3 347 5.2E-92 T 23-04-2016 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9|UniPathway: UPA00031 SHYC_RS06860 e932bbcd2cf42a854e86a448760cd81d 302 PANTHER PTHR11732:SF254 1 202 1.2E-137 T 23-04-2016 SHYC_RS06860 e932bbcd2cf42a854e86a448760cd81d 302 PANTHER PTHR11732:SF254 218 298 1.2E-137 T 23-04-2016 SHYC_RS06860 e932bbcd2cf42a854e86a448760cd81d 302 SUPERFAMILY SSF51430 1 294 4.71E-68 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS06860 e932bbcd2cf42a854e86a448760cd81d 302 PANTHER PTHR11732 1 202 1.2E-137 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SHYC_RS06860 e932bbcd2cf42a854e86a448760cd81d 302 PANTHER PTHR11732 218 298 1.2E-137 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SHYC_RS06860 e932bbcd2cf42a854e86a448760cd81d 302 Gene3D G3DSA:3.20.20.100 3 298 6.1E-66 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS06860 e932bbcd2cf42a854e86a448760cd81d 302 Pfam PF00248 Aldo/keto reductase family 14 292 1.9E-54 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS03810 642b938e3d67f548ebd82f7c21e5b422 170 PANTHER PTHR34473 1 167 1.2E-26 T 23-04-2016 SHYC_RS03810 642b938e3d67f548ebd82f7c21e5b422 170 Pfam PF03703 Bacterial PH domain 70 144 1.1E-15 T 23-04-2016 IPR005182 Domain of unknown function DUF304 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Gene3D G3DSA:3.90.199.10 335 400 1.5E-123 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Gene3D G3DSA:3.90.199.10 31 236 1.5E-123 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 472 2.4E-158 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 PANTHER PTHR10169:SF48 6 780 0.0 T 23-04-2016 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 811 0.0 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 PANTHER PTHR10169 6 780 0.0 T 23-04-2016 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Gene3D G3DSA:3.30.1360.40 237 334 1.3E-37 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 551 1.6E-11 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 662 706 5.5E-13 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 713 760 3.4E-14 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 614 657 1.2E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 556 605 1.3E-11 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 764 810 3.5E-9 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 SUPERFAMILY SSF101904 501 817 2.49E-106 T 23-04-2016 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Gene3D G3DSA:2.120.10.90 498 811 1.1E-123 T 23-04-2016 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 SUPERFAMILY SSF56719 31 488 5.49E-181 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 SMART SM00434 12 466 1.7E-293 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS00035 f3c1a3f1969aa4205075d24f78ba9c17 890 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 816 29.799 T 23-04-2016 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHYC_RS01245 44e04ce5a73fa768f656ae652ce834be 471 PANTHER PTHR24423:SF472 102 470 1.9E-27 T 23-04-2016 SHYC_RS01245 44e04ce5a73fa768f656ae652ce834be 471 SMART SM00387 378 470 1.7E-5 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS01245 44e04ce5a73fa768f656ae652ce834be 471 Pfam PF12282 Signal transduction histidine kinase 5 132 7.7E-15 T 23-04-2016 IPR022066 Signal transduction histidine kinase SHYC_RS01245 44e04ce5a73fa768f656ae652ce834be 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 385 464 5.0E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS01245 44e04ce5a73fa768f656ae652ce834be 471 PANTHER PTHR24423 102 470 1.9E-27 T 23-04-2016 SHYC_RS01245 44e04ce5a73fa768f656ae652ce834be 471 Gene3D G3DSA:3.30.565.10 355 469 1.1E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS01245 44e04ce5a73fa768f656ae652ce834be 471 Pfam PF07568 Histidine kinase 278 351 7.1E-17 T 23-04-2016 IPR011495 Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain SHYC_RS01245 44e04ce5a73fa768f656ae652ce834be 471 SUPERFAMILY SSF55874 347 468 4.32E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS08280 b53f00e8f4cdda4f0a4dc7450824e4c8 295 Pfam PF08478 POTRA domain, FtsQ-type 56 119 6.5E-14 T 23-04-2016 IPR013685 Polypeptide-transport-associated, FtsQ-type SHYC_RS08280 b53f00e8f4cdda4f0a4dc7450824e4c8 295 PANTHER PTHR37820 11 295 1.9E-38 T 23-04-2016 SHYC_RS08280 b53f00e8f4cdda4f0a4dc7450824e4c8 295 Pfam PF03799 Cell division protein FtsQ 127 243 2.1E-13 T 23-04-2016 IPR005548 Cell division protein FtsQ/DivIB SHYC_RS08280 b53f00e8f4cdda4f0a4dc7450824e4c8 295 Hamap MF_00912 Cell division protein DivIB [divIB]. 1 257 26.844 T 23-04-2016 IPR026580 Cell division protein DivIB SHYC_RS05775 479ab2b9efdbddbf5f61e04a7508553c 569 SUPERFAMILY SSF56801 18 559 9.94E-161 T 23-04-2016 SHYC_RS05775 479ab2b9efdbddbf5f61e04a7508553c 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 546 1.2E-24 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SHYC_RS05775 479ab2b9efdbddbf5f61e04a7508553c 569 ProSitePatterns PS00455 Putative AMP-binding domain signature. 209 220 - T 23-04-2016 IPR020845 AMP-binding, conserved site SHYC_RS05775 479ab2b9efdbddbf5f61e04a7508553c 569 Gene3D G3DSA:2.30.38.10 377 449 2.0E-17 T 23-04-2016 SHYC_RS05775 479ab2b9efdbddbf5f61e04a7508553c 569 Gene3D G3DSA:3.40.50.980 215 376 1.8E-35 T 23-04-2016 SHYC_RS05775 479ab2b9efdbddbf5f61e04a7508553c 569 PANTHER PTHR24095 23 569 3.9E-221 T 23-04-2016 SHYC_RS05775 479ab2b9efdbddbf5f61e04a7508553c 569 Gene3D G3DSA:3.40.50.980 46 214 5.0E-40 T 23-04-2016 SHYC_RS05775 479ab2b9efdbddbf5f61e04a7508553c 569 Pfam PF00501 AMP-binding enzyme 55 458 6.4E-95 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHYC_RS05775 479ab2b9efdbddbf5f61e04a7508553c 569 Gene3D G3DSA:3.30.300.30 454 560 4.7E-28 T 23-04-2016 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 135 348 3.6E-67 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 339 348 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 SMART SM00382 147 332 6.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 PANTHER PTHR15184 1 470 0.0 T 23-04-2016 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 Gene3D G3DSA:2.40.10.170 3 79 2.3E-29 T 23-04-2016 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 SUPERFAMILY SSF50615 2 79 1.12E-25 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 Gene3D G3DSA:3.40.50.300 80 349 9.8E-109 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 4 466 4.9E-255 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 77 1.4E-22 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 Gene3D G3DSA:1.10.1140.10 351 469 1.0E-52 T 23-04-2016 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 466 57.573 T 23-04-2016 IPR005722 ATPase, F1 complex, beta subunit GO:0015986|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 SUPERFAMILY SSF52540 81 353 2.9E-89 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 PANTHER PTHR15184:SF8 1 470 0.0 T 23-04-2016 SHYC_RS03680 ffbbac3af09763d4c93a89294867aae3 470 SUPERFAMILY SSF47917 351 466 2.28E-51 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS04700 2b8a9cd6a8c2a62217b880e0e71d8f0e 507 Gene3D G3DSA:3.40.630.40 175 364 5.2E-18 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SHYC_RS04700 2b8a9cd6a8c2a62217b880e0e71d8f0e 507 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 179 352 5.4E-20 T 23-04-2016 IPR002508 Cell wall hydrolase/autolysin, catalytic GO:0008745|GO:0009253 SHYC_RS04700 2b8a9cd6a8c2a62217b880e0e71d8f0e 507 SUPERFAMILY SSF54001 44 145 6.67E-12 T 23-04-2016 SHYC_RS04700 2b8a9cd6a8c2a62217b880e0e71d8f0e 507 Pfam PF08460 Bacterial SH3 domain 442 468 6.9E-5 T 23-04-2016 IPR003646 SH3-like domain, bacterial-type SHYC_RS04700 2b8a9cd6a8c2a62217b880e0e71d8f0e 507 SUPERFAMILY SSF53187 177 352 1.63E-13 T 23-04-2016 SHYC_RS04700 2b8a9cd6a8c2a62217b880e0e71d8f0e 507 Pfam PF05257 CHAP domain 49 137 6.7E-9 T 23-04-2016 IPR007921 CHAP domain SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 Gene3D G3DSA:3.50.50.60 118 240 4.2E-34 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 SUPERFAMILY SSF51905 1 305 2.53E-55 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PANTHER PTHR22912:SF48 1 309 3.7E-148 T 23-04-2016 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 Gene3D G3DSA:3.50.50.60 241 308 6.2E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 Gene3D G3DSA:3.50.50.60 2 116 6.2E-39 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 305 5.6E-117 T 23-04-2016 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00240+1.8.1.9|KEGG: 00450+1.8.1.9 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 23-04-2016 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 294 7.6E-52 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.3E-35 T 23-04-2016 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 3.3E-35 T 23-04-2016 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 3.3E-35 T 23-04-2016 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 3.3E-35 T 23-04-2016 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 3.3E-35 T 23-04-2016 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PANTHER PTHR22912 1 309 3.7E-148 T 23-04-2016 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 4.0E-68 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 4.0E-68 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 4.0E-68 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.0E-68 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 4.0E-68 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 195 211 4.0E-68 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.0E-68 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 286 4.0E-68 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS09655 a198d4d33785beeba31895484e91cfc8 314 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 255 4.0E-68 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 Gene3D G3DSA:3.40.50.300 3 139 5.9E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 SUPERFAMILY SSF48019 236 417 1.3E-66 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 Gene3D G3DSA:1.20.272.10 232 329 6.7E-40 T 23-04-2016 SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 Gene3D G3DSA:1.10.8.60 140 223 1.2E-12 T 23-04-2016 SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 Gene3D G3DSA:1.10.3710.10 331 418 6.9E-25 T 23-04-2016 SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 PANTHER PTHR13779:SF7 1 408 2.1E-155 T 23-04-2016 SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 PANTHER PTHR13779 1 408 2.1E-155 T 23-04-2016 SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 SUPERFAMILY SSF52540 3 206 3.6E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 43 145 7.8E-18 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 SMART SM00382 39 151 2.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 Pfam PF12002 MgsA AAA+ ATPase C terminal 251 416 3.4E-63 T 23-04-2016 IPR021886 MgsA AAA+ ATPase C-terminal SHYC_RS06230 da4120eb8a1b95cd19965ea5d9e10de8 418 Pfam PF16193 AAA C-terminal domain 175 250 3.3E-24 T 23-04-2016 IPR032423 AAA ATPase, C-terminal domain SHYC_RS07240 9989e289e37e405773b712ebde94b514 396 PANTHER PTHR38432 13 391 9.8E-130 T 23-04-2016 SHYC_RS07240 9989e289e37e405773b712ebde94b514 396 PIRSF PIRSF026508 20 389 2.5E-115 T 23-04-2016 IPR008863 Toxic anion resistance SHYC_RS07240 9989e289e37e405773b712ebde94b514 396 PANTHER PTHR38432:SF1 13 391 9.8E-130 T 23-04-2016 SHYC_RS07240 9989e289e37e405773b712ebde94b514 396 Pfam PF05816 Toxic anion resistance protein (TelA) 53 380 1.7E-117 T 23-04-2016 IPR008863 Toxic anion resistance SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 PANTHER PTHR22594:SF16 5 430 7.5E-196 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 2 429 2.0E-165 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 SUPERFAMILY SSF55681 110 424 6.84E-97 T 23-04-2016 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 Gene3D G3DSA:2.40.50.140 3 101 3.4E-26 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 PANTHER PTHR22594 5 430 7.5E-196 T 23-04-2016 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 1 430 41.659 T 23-04-2016 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22|Reactome: REACT_71 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 Gene3D G3DSA:3.30.930.10 102 428 9.7E-116 T 23-04-2016 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 209 3.9E-16 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 180 192 3.9E-16 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 345 361 3.9E-16 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 385 399 3.9E-16 T 23-04-2016 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 Pfam PF01336 OB-fold nucleic acid binding domain 16 95 2.6E-15 T 23-04-2016 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 SUPERFAMILY SSF50249 9 102 3.86E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS07050 82bdc3f2a0191fcf93c4d397f8230f25 430 Pfam PF00152 tRNA synthetases class II (D, K and N) 111 424 1.8E-83 T 23-04-2016 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS11535 423924d75886d988b09d1cfce1a2770d 251 PANTHER PTHR23026:SF98 1 193 6.5E-65 T 23-04-2016 SHYC_RS11535 423924d75886d988b09d1cfce1a2770d 251 PIRSF PIRSF005426 1 251 8.2E-82 T 23-04-2016 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 SHYC_RS11535 423924d75886d988b09d1cfce1a2770d 251 Pfam PF00881 Nitroreductase family 10 164 1.4E-17 T 23-04-2016 IPR029479 Nitroreductase SHYC_RS11535 423924d75886d988b09d1cfce1a2770d 251 Gene3D G3DSA:3.40.109.10 5 250 6.1E-64 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 SHYC_RS11535 423924d75886d988b09d1cfce1a2770d 251 PANTHER PTHR23026 1 193 6.5E-65 T 23-04-2016 SHYC_RS11535 423924d75886d988b09d1cfce1a2770d 251 SUPERFAMILY SSF55469 5 250 6.64E-61 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 PRINTS PR00132 Glycosyl hydrolase family 2 signature 289 303 5.4E-16 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 PRINTS PR00132 Glycosyl hydrolase family 2 signature 401 416 5.4E-16 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 PRINTS PR00132 Glycosyl hydrolase family 2 signature 502 517 5.4E-16 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 PRINTS PR00132 Glycosyl hydrolase family 2 signature 320 338 5.4E-16 T 23-04-2016 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 14 180 6.0E-23 T 23-04-2016 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 Gene3D G3DSA:2.60.40.320 182 279 1.3E-22 T 23-04-2016 IPR013812 Glycoside hydrolase, family 2/20, immunoglobulin-like beta-sandwich domain GO:0004553|GO:0005975 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 SUPERFAMILY SSF49303 183 279 2.27E-17 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 SUPERFAMILY SSF51445 280 593 1.17E-79 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 280 595 9.6E-76 T 23-04-2016 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 401 415 - T 23-04-2016 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 Pfam PF00703 Glycosyl hydrolases family 2 183 278 2.7E-12 T 23-04-2016 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 SUPERFAMILY SSF49785 1 181 1.16E-50 T 23-04-2016 IPR008979 Galactose-binding domain-like SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 PANTHER PTHR10066 383 597 6.1E-237 T 23-04-2016 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 PANTHER PTHR10066 1 366 6.1E-237 T 23-04-2016 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 PANTHER PTHR10066:SF67 383 597 6.1E-237 T 23-04-2016 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 PANTHER PTHR10066:SF67 1 366 6.1E-237 T 23-04-2016 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 Gene3D G3DSA:3.20.20.80 281 595 7.3E-73 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 330 355 - T 23-04-2016 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 SHYC_RS01010 5fe9a9092e2cbea5596dbfd0fe788808 601 Gene3D G3DSA:2.60.120.260 1 180 4.2E-47 T 23-04-2016 IPR008979 Galactose-binding domain-like SHYC_RS10205 c08b42ffb0302488f62f8dac55852eb2 268 Pfam PF00005 ABC transporter 20 167 1.2E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS10205 c08b42ffb0302488f62f8dac55852eb2 268 PANTHER PTHR24220:SF438 5 255 2.2E-151 T 23-04-2016 SHYC_RS10205 c08b42ffb0302488f62f8dac55852eb2 268 SMART SM00382 28 217 2.2E-18 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS10205 c08b42ffb0302488f62f8dac55852eb2 268 SUPERFAMILY SSF52540 4 230 1.74E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10205 c08b42ffb0302488f62f8dac55852eb2 268 PANTHER PTHR24220 5 255 2.2E-151 T 23-04-2016 SHYC_RS10205 c08b42ffb0302488f62f8dac55852eb2 268 Gene3D G3DSA:3.40.50.300 4 238 4.1E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10205 c08b42ffb0302488f62f8dac55852eb2 268 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS07500 76ccf8dce474c091f782e40f5a7b8175 49 PANTHER PTHR15238:SF3 1 49 1.7E-24 T 23-04-2016 SHYC_RS07500 76ccf8dce474c091f782e40f5a7b8175 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 3.4E-23 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07500 76ccf8dce474c091f782e40f5a7b8175 49 Pfam PF00471 Ribosomal protein L33 3 49 2.5E-25 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07500 76ccf8dce474c091f782e40f5a7b8175 49 SUPERFAMILY SSF57829 1 49 3.85E-21 T 23-04-2016 IPR011332 Zinc-binding ribosomal protein GO:0006412 SHYC_RS07500 76ccf8dce474c091f782e40f5a7b8175 49 PANTHER PTHR15238 1 49 1.7E-24 T 23-04-2016 SHYC_RS07500 76ccf8dce474c091f782e40f5a7b8175 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 23-04-2016 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07500 76ccf8dce474c091f782e40f5a7b8175 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 20.167 T 23-04-2016 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS02630 76858ecd9edb0c45a14936ef09e5e541 440 Pfam PF03553 Na+/H+ antiporter family 245 434 1.7E-10 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SHYC_RS02630 76858ecd9edb0c45a14936ef09e5e541 440 Pfam PF03553 Na+/H+ antiporter family 78 224 1.8E-17 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SHYC_RS02630 76858ecd9edb0c45a14936ef09e5e541 440 PANTHER PTHR33451:SF5 1 440 3.5E-150 T 23-04-2016 SHYC_RS02630 76858ecd9edb0c45a14936ef09e5e541 440 PANTHER PTHR33451 1 440 3.5E-150 T 23-04-2016 SHYC_RS02050 76c4c607ca354ef7aa5ae53e8e6fdebc 256 SUPERFAMILY SSF89550 1 209 1.14E-14 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SHYC_RS02050 76c4c607ca354ef7aa5ae53e8e6fdebc 256 PANTHER PTHR39181 3 255 3.9E-74 T 23-04-2016 SHYC_RS02050 76c4c607ca354ef7aa5ae53e8e6fdebc 256 Gene3D G3DSA:3.20.20.140 1 237 2.4E-6 T 23-04-2016 SHYC_RS02050 76c4c607ca354ef7aa5ae53e8e6fdebc 256 PIRSF PIRSF016557 2 256 1.1E-93 T 23-04-2016 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 UniPathway: UPA00934 SHYC_RS02050 76c4c607ca354ef7aa5ae53e8e6fdebc 256 PANTHER PTHR39181:SF1 3 255 3.9E-74 T 23-04-2016 SHYC_RS08370 8858ef4801502f6b7207672354103d69 194 PANTHER PTHR11067 1 193 7.7E-72 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SHYC_RS08370 8858ef4801502f6b7207672354103d69 194 PANTHER PTHR11067:SF9 1 193 7.7E-72 T 23-04-2016 SHYC_RS08370 8858ef4801502f6b7207672354103d69 194 Gene3D G3DSA:3.90.950.10 1 190 5.0E-72 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SHYC_RS08370 8858ef4801502f6b7207672354103d69 194 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 4 189 7.8E-64 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SHYC_RS08370 8858ef4801502f6b7207672354103d69 194 Pfam PF01725 Ham1 family 4 187 8.3E-56 T 23-04-2016 IPR002637 Ham1-like protein GO:0016787 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SHYC_RS08370 8858ef4801502f6b7207672354103d69 194 SUPERFAMILY SSF52972 1 190 5.49E-65 T 23-04-2016 IPR029001 Inosine triphosphate pyrophosphatase-like SHYC_RS08370 8858ef4801502f6b7207672354103d69 194 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 191 45.817 T 23-04-2016 IPR020922 Non-canonical purine NTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.19|KEGG: 00240+3.6.1.19|KEGG: 00983+3.6.1.19|MetaCyc: PWY-7206 SHYC_RS09055 5bc3923cd1277d5ac31059582a682e71 611 SUPERFAMILY SSF116726 554 603 9.94E-9 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHYC_RS09055 5bc3923cd1277d5ac31059582a682e71 611 Gene3D G3DSA:3.40.50.720 398 515 4.8E-15 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09055 5bc3923cd1277d5ac31059582a682e71 611 PANTHER PTHR32468 3 609 5.1E-129 T 23-04-2016 SHYC_RS09055 5bc3923cd1277d5ac31059582a682e71 611 Gene3D G3DSA:3.30.70.1450 565 605 1.0E-6 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHYC_RS09055 5bc3923cd1277d5ac31059582a682e71 611 Pfam PF00999 Sodium/hydrogen exchanger family 7 384 6.4E-72 T 23-04-2016 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 SHYC_RS09055 5bc3923cd1277d5ac31059582a682e71 611 PANTHER PTHR32468:SF9 3 609 5.1E-129 T 23-04-2016 SHYC_RS09055 5bc3923cd1277d5ac31059582a682e71 611 Pfam PF02080 TrkA-C domain 556 604 2.1E-9 T 23-04-2016 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 SHYC_RS09055 5bc3923cd1277d5ac31059582a682e71 611 SUPERFAMILY SSF51735 400 511 1.25E-11 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09055 5bc3923cd1277d5ac31059582a682e71 611 Pfam PF02254 TrkA-N domain 443 509 6.9E-7 T 23-04-2016 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 SHYC_RS03225 4d00309251bbd6599566c6f4a855858e 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 5.5E-48 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03225 4d00309251bbd6599566c6f4a855858e 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.979 T 23-04-2016 IPR023035 Ribosomal protein S9, bacterial/plastid SHYC_RS03225 4d00309251bbd6599566c6f4a855858e 130 Gene3D G3DSA:3.30.230.10 6 130 4.4E-51 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHYC_RS03225 4d00309251bbd6599566c6f4a855858e 130 PANTHER PTHR21569 6 130 4.7E-70 T 23-04-2016 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03225 4d00309251bbd6599566c6f4a855858e 130 SUPERFAMILY SSF54211 6 130 2.92E-48 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS03225 4d00309251bbd6599566c6f4a855858e 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 23-04-2016 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 SHYC_RS03500 fa96b41616077d4b0cbfb416491d5228 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 23-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SHYC_RS03500 fa96b41616077d4b0cbfb416491d5228 236 PANTHER PTHR21234 1 235 2.1E-66 T 23-04-2016 IPR018017 Nucleoside phosphorylase SHYC_RS03500 fa96b41616077d4b0cbfb416491d5228 236 Gene3D G3DSA:3.40.50.1580 14 235 7.0E-79 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHYC_RS03500 fa96b41616077d4b0cbfb416491d5228 236 SUPERFAMILY SSF53167 5 235 4.97E-89 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHYC_RS03500 fa96b41616077d4b0cbfb416491d5228 236 Pfam PF01048 Phosphorylase superfamily 18 226 5.4E-36 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHYC_RS03500 fa96b41616077d4b0cbfb416491d5228 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 7 235 2.1E-92 T 23-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SHYC_RS03500 fa96b41616077d4b0cbfb416491d5228 236 PANTHER PTHR21234:SF8 1 235 2.1E-66 T 23-04-2016 SHYC_RS03500 fa96b41616077d4b0cbfb416491d5228 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 4 236 41.095 T 23-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SHYC_RS08225 aa89e44ee5dc0c4dd19e2ae3207cc139 159 TIGRFAM TIGR00077 lspA: signal peptidase II 11 157 1.9E-40 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SHYC_RS08225 aa89e44ee5dc0c4dd19e2ae3207cc139 159 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 5 157 17.083 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SHYC_RS08225 aa89e44ee5dc0c4dd19e2ae3207cc139 159 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 52 60 1.6E-18 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SHYC_RS08225 aa89e44ee5dc0c4dd19e2ae3207cc139 159 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 96 111 1.6E-18 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SHYC_RS08225 aa89e44ee5dc0c4dd19e2ae3207cc139 159 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 132 148 1.6E-18 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SHYC_RS08225 aa89e44ee5dc0c4dd19e2ae3207cc139 159 Pfam PF01252 Signal peptidase (SPase) II 14 152 3.4E-35 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SHYC_RS08225 aa89e44ee5dc0c4dd19e2ae3207cc139 159 ProSitePatterns PS00855 Signal peptidases II signature. 99 111 - T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SHYC_RS08225 aa89e44ee5dc0c4dd19e2ae3207cc139 159 PANTHER PTHR33695 11 158 8.8E-48 T 23-04-2016 SHYC_RS08225 aa89e44ee5dc0c4dd19e2ae3207cc139 159 PANTHER PTHR33695:SF1 11 158 8.8E-48 T 23-04-2016 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 UniPathway: UPA00665 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 252 541 6.0E-131 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 127 1.2E-31 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 Gene3D G3DSA:3.50.30.10 135 255 5.9E-46 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 PANTHER PTHR22931 70 551 1.0E-209 T 23-04-2016 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 154 226 2.0E-23 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 SUPERFAMILY SSF51621 251 550 1.68E-113 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 SUPERFAMILY SSF47831 24 144 6.28E-35 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 185 196 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 6 566 1.6E-246 T 23-04-2016 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 SUPERFAMILY SSF52009 126 247 9.29E-38 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 Gene3D G3DSA:3.20.20.60 256 570 1.3E-118 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 PIRSF PIRSF000732 1 573 3.3E-226 T 23-04-2016 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 448 466 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 501 513 6.4E-32 T 23-04-2016 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 448 463 6.4E-32 T 23-04-2016 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 294 313 6.4E-32 T 23-04-2016 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 465 480 6.4E-32 T 23-04-2016 SHYC_RS08670 bc67c88ef1f739ef70d3e9518e792bae 573 Gene3D G3DSA:1.10.274.10 24 134 2.4E-39 T 23-04-2016 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 SHYC_RS03470 ba3774251e6fe6da7811f197c7005e67 232 Gene3D G3DSA:1.10.10.10 4 75 3.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03470 ba3774251e6fe6da7811f197c7005e67 232 PANTHER PTHR11751:SF382 1 109 3.0E-26 T 23-04-2016 SHYC_RS03470 ba3774251e6fe6da7811f197c7005e67 232 SMART SM00345 12 71 6.1E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS03470 ba3774251e6fe6da7811f197c7005e67 232 Gene3D G3DSA:1.20.120.530 87 228 2.0E-31 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SHYC_RS03470 ba3774251e6fe6da7811f197c7005e67 232 SUPERFAMILY SSF48008 90 227 5.75E-28 T 23-04-2016 IPR008920 Transcription regulator FadR/GntR, C-terminal SHYC_RS03470 ba3774251e6fe6da7811f197c7005e67 232 Pfam PF07729 FCD domain 93 219 6.1E-25 T 23-04-2016 IPR011711 GntR, C-terminal SHYC_RS03470 ba3774251e6fe6da7811f197c7005e67 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 71 3.2E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS03470 ba3774251e6fe6da7811f197c7005e67 232 PANTHER PTHR11751 1 109 3.0E-26 T 23-04-2016 SHYC_RS03470 ba3774251e6fe6da7811f197c7005e67 232 SUPERFAMILY SSF46785 4 81 7.08E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03470 ba3774251e6fe6da7811f197c7005e67 232 SMART SM00895 93 220 8.6E-22 T 23-04-2016 IPR011711 GntR, C-terminal SHYC_RS07115 c94d706cece95765b9458df80208573a 138 PANTHER PTHR33033:SF11 3 122 6.6E-24 T 23-04-2016 SHYC_RS07115 c94d706cece95765b9458df80208573a 138 Gene3D G3DSA:3.30.420.10 3 125 7.7E-16 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS07115 c94d706cece95765b9458df80208573a 138 SUPERFAMILY SSF53098 2 122 6.58E-27 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS07115 c94d706cece95765b9458df80208573a 138 PANTHER PTHR33033 3 122 6.6E-24 T 23-04-2016 SHYC_RS07115 c94d706cece95765b9458df80208573a 138 Pfam PF13456 Reverse transcriptase-like 6 122 2.8E-20 T 23-04-2016 SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 183 411 5.9E-79 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 Gene3D G3DSA:4.10.320.10 117 151 3.4E-6 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 412 2.1E-173 T 23-04-2016 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|UniPathway: UPA00868 SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 PANTHER PTHR23151:SF47 1 413 6.0E-211 T 23-04-2016 SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 Pfam PF02817 e3 binding domain 122 151 1.2E-5 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 Pfam PF00364 Biotin-requiring enzyme 3 74 3.5E-23 T 23-04-2016 IPR000089 Biotin/lipoyl attachment SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 SUPERFAMILY SSF52777 184 411 4.89E-81 T 23-04-2016 SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 SUPERFAMILY SSF51230 2 90 5.37E-27 T 23-04-2016 IPR011053 Single hybrid motif SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 PANTHER PTHR23151 1 413 6.0E-211 T 23-04-2016 SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 Gene3D G3DSA:3.30.559.10 175 411 7.7E-85 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SHYC_RS07210 d24a89ade4b4d05a663c5251cbcca615 413 Gene3D G3DSA:2.40.50.100 2 92 5.4E-30 T 23-04-2016 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 PANTHER PTHR11911:SF6 1 283 1.7E-250 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 PANTHER PTHR11911:SF6 301 487 1.7E-250 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 PIRSF PIRSF000130 1 488 2.8E-207 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 SMART SM01240 9 475 0.0 T 23-04-2016 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 Pfam PF00571 CBS domain 97 144 5.9E-8 T 23-04-2016 IPR000644 CBS domain SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 Pfam PF00571 CBS domain 153 203 1.6E-7 T 23-04-2016 IPR000644 CBS domain SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 SUPERFAMILY SSF54631 65 206 2.78E-29 T 23-04-2016 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 297 309 - T 23-04-2016 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 Reactome: REACT_1698 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 Gene3D G3DSA:3.20.20.70 4 487 2.4E-200 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 457 9.9E-198 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 SMART SM00116 98 148 4.1E-10 T 23-04-2016 IPR000644 CBS domain SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 SMART SM00116 161 208 9.3E-7 T 23-04-2016 IPR000644 CBS domain SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 488 83.15 T 23-04-2016 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: REACT_1698|UniPathway: UPA00601 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 475 5.5E-163 T 23-04-2016 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 Reactome: REACT_1698 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 SUPERFAMILY SSF51412 219 479 4.06E-122 T 23-04-2016 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 SUPERFAMILY SSF51412 5 92 4.06E-122 T 23-04-2016 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 PANTHER PTHR11911 1 283 1.7E-250 T 23-04-2016 SHYC_RS11495 5c1af16af1fe49dbe19ef2f90b6e7b6b 488 PANTHER PTHR11911 301 487 1.7E-250 T 23-04-2016 SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 Gene3D G3DSA:3.40.50.970 641 785 1.1E-13 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 PIRSF PIRSF000157 1 929 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 PANTHER PTHR23152:SF4 15 929 0.0 T 23-04-2016 SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 790 926 1.9E-32 T 23-04-2016 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 SUPERFAMILY SSF52518 576 788 2.06E-40 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 Gene3D G3DSA:3.40.50.970 142 526 4.8E-63 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 Pfam PF02779 Transketolase, pyrimidine binding domain 587 783 2.6E-56 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 SUPERFAMILY SSF52518 144 563 1.35E-69 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 PANTHER PTHR23152 15 929 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 1 929 21.223 T 23-04-2016 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 923 0.0 T 23-04-2016 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 Pfam PF00676 Dehydrogenase E1 component 212 519 1.9E-65 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SHYC_RS07205 1fd17bf68bd3ce2b47ca9c094956a021 929 SMART SM00861 587 783 2.3E-41 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHYC_RS10600 67bc3a69b23fcba2923b3f5d0ff47bf7 232 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 115 193 2.2E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS10600 67bc3a69b23fcba2923b3f5d0ff47bf7 232 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 193 7.1E-23 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10600 67bc3a69b23fcba2923b3f5d0ff47bf7 232 PANTHER PTHR18901:SF33 6 33 1.9E-46 T 23-04-2016 SHYC_RS10600 67bc3a69b23fcba2923b3f5d0ff47bf7 232 PANTHER PTHR18901:SF33 50 224 1.9E-46 T 23-04-2016 SHYC_RS10600 67bc3a69b23fcba2923b3f5d0ff47bf7 232 PANTHER PTHR18901 6 33 1.9E-46 T 23-04-2016 SHYC_RS10600 67bc3a69b23fcba2923b3f5d0ff47bf7 232 PANTHER PTHR18901 50 224 1.9E-46 T 23-04-2016 SHYC_RS10600 67bc3a69b23fcba2923b3f5d0ff47bf7 232 SUPERFAMILY SSF56784 7 228 4.75E-33 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10600 67bc3a69b23fcba2923b3f5d0ff47bf7 232 Gene3D G3DSA:3.40.50.1000 7 18 5.1E-32 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10600 67bc3a69b23fcba2923b3f5d0ff47bf7 232 Gene3D G3DSA:3.40.50.1000 101 230 5.1E-32 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 PRINTS PR01898 Bacterial superantigen superfamily signature 176 190 1.6E-7 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 PRINTS PR01898 Bacterial superantigen superfamily signature 116 129 1.6E-7 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 PRINTS PR01898 Bacterial superantigen superfamily signature 163 176 1.6E-7 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 3.6E-14 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 PRINTS PR01800 Staphylococcus aureus exotoxin signature 118 129 3.6E-14 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 PRINTS PR01800 Staphylococcus aureus exotoxin signature 162 178 3.6E-14 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 160 214 7.4E-7 T 23-04-2016 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 Gene3D G3DSA:3.10.20.120 123 237 8.7E-31 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 SUPERFAMILY SSF50203 42 127 1.22E-16 T 23-04-2016 IPR008992 Enterotoxin GO:0009405 SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 Gene3D G3DSA:2.40.50.110 57 122 1.6E-14 T 23-04-2016 SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 171 193 3.1E-7 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 16 34 3.1E-7 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 146 163 3.1E-7 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 225 237 3.1E-7 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 SUPERFAMILY SSF54334 150 237 9.29E-21 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS00460 ed19e909fd385afc5402dd7733558801 237 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 47 127 6.0E-15 T 23-04-2016 IPR015282 Staphylococcal superantigen-like OB-fold domain SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 PANTHER PTHR10359:SF18 1 218 7.5E-83 T 23-04-2016 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 TIGRFAM TIGR01083 nth: endonuclease III 4 196 4.6E-84 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 SUPERFAMILY SSF48150 1 210 1.88E-71 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 Pfam PF00633 Helix-hairpin-helix motif 100 128 4.0E-7 T 23-04-2016 IPR000445 Helix-hairpin-helix motif GO:0003677 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 23-04-2016 IPR004036 Endonuclease III-like, conserved site-2 Reactome: REACT_216 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 Gene3D G3DSA:1.10.340.30 23 123 1.0E-37 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 PANTHER PTHR10359 1 218 7.5E-83 T 23-04-2016 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 189 205 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 PIRSF PIRSF001435 1 214 2.4E-59 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 Gene3D G3DSA:1.10.1670.10 124 210 2.2E-35 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 Hamap MF_00942 Endonuclease III [nth]. 1 211 38.76 T 23-04-2016 IPR005759 Endonuclease III GO:0003906|GO:0006284 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 SMART SM00525 188 208 5.5E-4 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 1.7E-6 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 SMART SM00478 39 187 4.1E-60 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SHYC_RS07060 22c73544bdc1c6811ec23e1e65e659de 223 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 170 4.9E-24 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 SUPERFAMILY SSF52540 2 220 1.74E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 Gene3D G3DSA:3.40.50.300 2 225 1.8E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 Gene3D G3DSA:3.40.50.300 245 460 1.0E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 SMART SM00382 28 224 1.6E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 SMART SM00382 276 456 1.7E-7 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 Pfam PF00005 ABC transporter 271 407 7.4E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 Pfam PF00005 ABC transporter 20 158 1.6E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 SUPERFAMILY SSF52540 239 459 2.07E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 PANTHER PTHR24220 3 370 9.3E-122 T 23-04-2016 SHYC_RS08700 79e794db5466d68ed5ef87b245ce5167 464 PANTHER PTHR24220:SF558 3 370 9.3E-122 T 23-04-2016 SHYC_RS07785 801070d69e10f2cb536406c00cc58418 782 Pfam PF09397 Ftsk gamma domain 715 775 3.0E-28 T 23-04-2016 IPR018541 FtsK gamma domain SHYC_RS07785 801070d69e10f2cb536406c00cc58418 782 PANTHER PTHR22683 201 776 7.7E-225 T 23-04-2016 SHYC_RS07785 801070d69e10f2cb536406c00cc58418 782 PANTHER PTHR22683:SF41 201 776 7.7E-225 T 23-04-2016 SHYC_RS07785 801070d69e10f2cb536406c00cc58418 782 SMART SM00382 456 638 0.0012 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS07785 801070d69e10f2cb536406c00cc58418 782 SUPERFAMILY SSF52540 396 689 9.03E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07785 801070d69e10f2cb536406c00cc58418 782 Gene3D G3DSA:3.40.50.300 396 684 1.3E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07785 801070d69e10f2cb536406c00cc58418 782 SMART SM00843 713 778 3.5E-35 T 23-04-2016 IPR018541 FtsK gamma domain SHYC_RS07785 801070d69e10f2cb536406c00cc58418 782 Pfam PF01580 FtsK/SpoIIIE family 434 617 1.8E-61 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SHYC_RS07785 801070d69e10f2cb536406c00cc58418 782 SUPERFAMILY SSF46785 714 779 1.01E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01780 596da094bc6a5ff55d594a2844df80f4 489 Gene3D G3DSA:3.30.1360.60 406 485 1.8E-26 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS01780 596da094bc6a5ff55d594a2844df80f4 489 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 481 5.5E-191 T 23-04-2016 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 SHYC_RS01780 596da094bc6a5ff55d594a2844df80f4 489 Pfam PF00367 phosphotransferase system, EIIB 414 445 1.1E-13 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SHYC_RS01780 596da094bc6a5ff55d594a2844df80f4 489 Pfam PF02378 Phosphotransferase system, EIIC 10 316 1.3E-71 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS01780 596da094bc6a5ff55d594a2844df80f4 489 SUPERFAMILY SSF55604 410 481 6.28E-20 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS01780 596da094bc6a5ff55d594a2844df80f4 489 PANTHER PTHR30009:SF4 2 486 1.8E-199 T 23-04-2016 SHYC_RS01780 596da094bc6a5ff55d594a2844df80f4 489 PANTHER PTHR30009 2 486 1.8E-199 T 23-04-2016 SHYC_RS01780 596da094bc6a5ff55d594a2844df80f4 489 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 376 470 8.6E-17 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS01780 596da094bc6a5ff55d594a2844df80f4 489 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 423 440 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SHYC_RS02735 490255e76cf74b854cc4b7a4621d4136 284 PANTHER PTHR36110 11 283 1.7E-83 T 23-04-2016 SHYC_RS02735 490255e76cf74b854cc4b7a4621d4136 284 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 130 2.3E-11 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SHYC_RS02735 490255e76cf74b854cc4b7a4621d4136 284 PANTHER PTHR36110:SF1 11 283 1.7E-83 T 23-04-2016 SHYC_RS02735 490255e76cf74b854cc4b7a4621d4136 284 SUPERFAMILY SSF54593 11 278 5.73E-33 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS02735 490255e76cf74b854cc4b7a4621d4136 284 Gene3D G3DSA:3.10.180.10 151 283 1.3E-13 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS02735 490255e76cf74b854cc4b7a4621d4136 284 Gene3D G3DSA:3.10.180.10 7 134 3.7E-28 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS05095 24e0db27ad42f0191f042f8f6b0ba096 367 Gene3D G3DSA:3.10.20.180 168 292 3.1E-4 T 23-04-2016 SHYC_RS05095 24e0db27ad42f0191f042f8f6b0ba096 367 Gene3D G3DSA:3.10.20.130 41 154 9.2E-22 T 23-04-2016 SHYC_RS05095 24e0db27ad42f0191f042f8f6b0ba096 367 SUPERFAMILY SSF54328 38 154 4.25E-27 T 23-04-2016 IPR004093 Staphylokinase/Streptokinase GO:0005576|GO:0009405|GO:0031639 SHYC_RS05095 24e0db27ad42f0191f042f8f6b0ba096 367 SUPERFAMILY SSF54328 166 298 3.01E-25 T 23-04-2016 IPR004093 Staphylokinase/Streptokinase GO:0005576|GO:0009405|GO:0031639 SHYC_RS04150 b52aa83801c052afc8db3532b0717d0d 366 Pfam PF12708 Pectate lyase superfamily protein 4 215 1.4E-16 T 23-04-2016 IPR024535 Pectate lyase superfamily protein SHYC_RS04150 b52aa83801c052afc8db3532b0717d0d 366 Gene3D G3DSA:2.160.20.10 4 350 1.0E-45 T 23-04-2016 IPR012334 Pectin lyase fold SHYC_RS04150 b52aa83801c052afc8db3532b0717d0d 366 SUPERFAMILY SSF51126 4 350 1.11E-38 T 23-04-2016 IPR011050 Pectin lyase fold/virulence factor SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 PIRSF PIRSF001549 1 421 4.9E-118 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 Pfam PF13393 Histidyl-tRNA synthetase 7 313 7.7E-46 T 23-04-2016 SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 Gene3D G3DSA:3.40.50.800 327 418 9.8E-27 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 Pfam PF03129 Anticodon binding domain 333 418 1.2E-14 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 PANTHER PTHR11476 1 424 1.4E-215 T 23-04-2016 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 Reactome: REACT_71 SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 Gene3D G3DSA:3.30.930.10 219 322 2.5E-90 T 23-04-2016 SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 Gene3D G3DSA:3.30.930.10 2 183 2.5E-90 T 23-04-2016 SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 PANTHER PTHR11476:SF9 1 424 1.4E-215 T 23-04-2016 SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 SUPERFAMILY SSF55681 1 319 1.9E-95 T 23-04-2016 SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 32.465 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 410 3.0E-149 T 23-04-2016 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21|Reactome: REACT_71 SHYC_RS06215 588f6c223e61bd9937f4d748ab2b9292 424 SUPERFAMILY SSF52954 328 418 1.81E-23 T 23-04-2016 IPR004154 Anticodon-binding SHYC_RS00365 5aee5a5c4faa3b1e8dde3fef502ca48e 561 Pfam PF04183 IucA / IucC family 127 357 4.9E-49 T 23-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 SHYC_RS00365 5aee5a5c4faa3b1e8dde3fef502ca48e 561 PANTHER PTHR34384:SF1 7 557 7.6E-174 T 23-04-2016 SHYC_RS00365 5aee5a5c4faa3b1e8dde3fef502ca48e 561 PANTHER PTHR34384 7 557 7.6E-174 T 23-04-2016 SHYC_RS00365 5aee5a5c4faa3b1e8dde3fef502ca48e 561 Pfam PF06276 Ferric iron reductase FhuF-like transporter 381 530 9.0E-27 T 23-04-2016 IPR022770 Ferric iron reductase FhuF domain SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 326 7.1E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 345 7.1E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 304 7.1E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 Pfam PF07730 Histidine kinase 151 216 1.7E-13 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 259 347 3.4E-12 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 SMART SM00387 254 348 1.5E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 PANTHER PTHR24421 57 360 1.4E-82 T 23-04-2016 SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 Gene3D G3DSA:3.30.565.10 221 348 1.4E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 PIRSF PIRSF037432 1 346 1.1E-162 T 23-04-2016 IPR017203 Signal transduction histidine kinase, NreB GO:0000155|GO:0004673|GO:0005506|GO:0005524|GO:0005737|GO:0018106 SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 SUPERFAMILY SSF55874 224 345 1.57E-23 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS02410 1ce25c381f4c9eafca20ba36600a959a 360 PANTHER PTHR24421:SF18 57 360 1.4E-82 T 23-04-2016 SHYC_RS01930 4d396f136cbd8e967972e9c6c0bcaa26 267 PANTHER PTHR24220 3 250 1.4E-129 T 23-04-2016 SHYC_RS01930 4d396f136cbd8e967972e9c6c0bcaa26 267 SMART SM00382 26 213 2.6E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS01930 4d396f136cbd8e967972e9c6c0bcaa26 267 Gene3D G3DSA:3.40.50.300 3 231 4.2E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01930 4d396f136cbd8e967972e9c6c0bcaa26 267 SUPERFAMILY SSF52540 2 225 8.52E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01930 4d396f136cbd8e967972e9c6c0bcaa26 267 PANTHER PTHR24220:SF471 3 250 1.4E-129 T 23-04-2016 SHYC_RS01930 4d396f136cbd8e967972e9c6c0bcaa26 267 Pfam PF00005 ABC transporter 17 164 2.4E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 Gene3D G3DSA:1.10.10.60 58 113 1.2E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 SMART SM00342 21 104 1.6E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 Pfam PF12833 Helix-turn-helix domain 28 103 5.1E-14 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 SUPERFAMILY SSF46689 5 54 7.17E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 Pfam PF14526 Integron-associated effector binding protein 135 280 5.8E-13 T 23-04-2016 IPR029441 Integron-associated effector binding protein SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 SMART SM00871 128 281 4.2E-7 T 23-04-2016 IPR010499 Bacterial transcription activator, effector binding SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 SUPERFAMILY SSF46689 57 107 2.06E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 Gene3D G3DSA:3.20.80.10 114 279 7.7E-7 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 Gene3D G3DSA:1.10.10.60 5 57 1.0E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 PANTHER PTHR11019:SF56 4 112 5.5E-23 T 23-04-2016 SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 PANTHER PTHR11019 4 112 5.5E-23 T 23-04-2016 SHYC_RS06835 07c562f435cddb6fde583070ddcba177 285 SUPERFAMILY SSF55136 133 280 8.89E-7 T 23-04-2016 IPR011256 Regulatory factor, effector binding domain SHYC_RS01830 8e004deea3c223ea737c11323c0137c3 222 Pfam PF00072 Response regulator receiver domain 3 111 9.7E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS01830 8e004deea3c223ea737c11323c0137c3 222 PANTHER PTHR26402 1 219 1.4E-65 T 23-04-2016 SHYC_RS01830 8e004deea3c223ea737c11323c0137c3 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 218 8.6E-15 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS01830 8e004deea3c223ea737c11323c0137c3 222 SMART SM00862 145 218 8.4E-16 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS01830 8e004deea3c223ea737c11323c0137c3 222 PANTHER PTHR26402:SF578 1 219 1.4E-65 T 23-04-2016 SHYC_RS01830 8e004deea3c223ea737c11323c0137c3 222 Gene3D G3DSA:3.40.50.2300 1 124 1.9E-38 T 23-04-2016 SHYC_RS01830 8e004deea3c223ea737c11323c0137c3 222 SUPERFAMILY SSF52172 1 166 1.57E-38 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS01830 8e004deea3c223ea737c11323c0137c3 222 Gene3D G3DSA:1.10.10.10 125 219 8.7E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01830 8e004deea3c223ea737c11323c0137c3 222 SMART SM00448 1 112 2.2E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS06380 bae7315b8796370f0d85a410ae6ebe0e 190 SMART SM00471 14 141 5.1E-8 T 23-04-2016 IPR003607 HD/PDEase domain SHYC_RS06380 bae7315b8796370f0d85a410ae6ebe0e 190 SUPERFAMILY SSF109604 6 173 1.18E-28 T 23-04-2016 SHYC_RS06380 bae7315b8796370f0d85a410ae6ebe0e 190 PANTHER PTHR35795 6 186 5.4E-56 T 23-04-2016 SHYC_RS06380 bae7315b8796370f0d85a410ae6ebe0e 190 Gene3D G3DSA:1.10.3210.10 1 184 4.2E-54 T 23-04-2016 IPR006674 HD domain SHYC_RS06380 bae7315b8796370f0d85a410ae6ebe0e 190 Pfam PF01966 HD domain 18 130 4.2E-13 T 23-04-2016 IPR006674 HD domain SHYC_RS06380 bae7315b8796370f0d85a410ae6ebe0e 190 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 11 182 2.1E-37 T 23-04-2016 IPR005249 Conserved hypothetical protein CHP00488 SHYC_RS01680 72c0259d85af063f2a5448ad2e5f29c9 121 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 3 117 3.1E-34 T 23-04-2016 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain SHYC_RS01680 72c0259d85af063f2a5448ad2e5f29c9 121 PANTHER PTHR38594:SF1 1 120 1.5E-31 T 23-04-2016 SHYC_RS01680 72c0259d85af063f2a5448ad2e5f29c9 121 Pfam PF03610 PTS system fructose IIA component 4 111 3.2E-21 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SHYC_RS01680 72c0259d85af063f2a5448ad2e5f29c9 121 SUPERFAMILY SSF53062 1 118 2.88E-26 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SHYC_RS01680 72c0259d85af063f2a5448ad2e5f29c9 121 PANTHER PTHR38594 1 120 1.5E-31 T 23-04-2016 SHYC_RS01680 72c0259d85af063f2a5448ad2e5f29c9 121 Gene3D G3DSA:3.40.50.510 1 118 2.7E-33 T 23-04-2016 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 SHYC_RS10905 a111108521910d3bfe15c9f96db1a346 309 PANTHER PTHR10314:SF110 7 307 2.9E-152 T 23-04-2016 SHYC_RS10905 a111108521910d3bfe15c9f96db1a346 309 Gene3D G3DSA:3.40.50.1100 40 136 9.8E-46 T 23-04-2016 SHYC_RS10905 a111108521910d3bfe15c9f96db1a346 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 306 6.4E-139 T 23-04-2016 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SHYC_RS10905 a111108521910d3bfe15c9f96db1a346 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 35 53 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SHYC_RS10905 a111108521910d3bfe15c9f96db1a346 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 294 2.2E-69 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS10905 a111108521910d3bfe15c9f96db1a346 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 306 2.1E-131 T 23-04-2016 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936|UniPathway: UPA00136 SHYC_RS10905 a111108521910d3bfe15c9f96db1a346 309 Gene3D G3DSA:3.40.50.1100 137 306 9.9E-72 T 23-04-2016 SHYC_RS10905 a111108521910d3bfe15c9f96db1a346 309 PANTHER PTHR10314 7 307 2.9E-152 T 23-04-2016 SHYC_RS10905 a111108521910d3bfe15c9f96db1a346 309 SUPERFAMILY SSF53686 5 306 1.44E-102 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS03760 f2c4822521a8d0a0536528ff4a01a650 95 PANTHER PTHR33677:SF3 5 94 9.6E-35 T 23-04-2016 SHYC_RS03760 f2c4822521a8d0a0536528ff4a01a650 95 PANTHER PTHR33677 5 94 9.6E-35 T 23-04-2016 SHYC_RS03760 f2c4822521a8d0a0536528ff4a01a650 95 Pfam PF02583 Metal-sensitive transcriptional repressor 12 90 3.2E-28 T 23-04-2016 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Gene3D G3DSA:2.40.40.20 814 932 4.2E-33 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 262 279 - T 23-04-2016 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 PANTHER PTHR11615 6 54 0.0 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 PANTHER PTHR11615 255 951 0.0 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 SUPERFAMILY SSF54862 79 212 2.93E-28 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 84 123 4.9E-10 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 SUPERFAMILY SSF54292 6 74 1.76E-10 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 SUPERFAMILY SSF53706 251 776 1.83E-191 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 SMART SM00926 257 311 5.1E-19 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Pfam PF12838 4Fe-4S dicluster domain 146 204 1.8E-7 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 SMART SM00929 84 125 1.4E-11 T 23-04-2016 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 SUPERFAMILY SSF50692 794 932 4.07E-33 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 PIRSF PIRSF036643 1 964 0.0 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Gene3D G3DSA:3.40.50.740 314 389 5.2E-87 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Gene3D G3DSA:3.40.50.740 574 805 5.2E-87 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 257 311 2.0E-19 T 23-04-2016 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 PANTHER PTHR11615:SF112 6 54 0.0 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 PANTHER PTHR11615:SF112 255 951 0.0 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Gene3D G3DSA:2.20.25.90 264 312 4.0E-23 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Pfam PF01568 Molydopterin dinucleotide binding domain 821 927 8.6E-20 T 23-04-2016 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 76 1.3E-8 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Gene3D G3DSA:3.30.70.20 135 194 1.8E-16 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 262 930 1.1E-248 T 23-04-2016 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Pfam PF00384 Molybdopterin oxidoreductase 314 737 6.3E-74 T 23-04-2016 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Gene3D G3DSA:3.40.228.10 390 573 3.1E-57 T 23-04-2016 SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHYC_RS02800 702e9c3c04d849af8712b468e4c175e8 978 Gene3D G3DSA:1.10.1060.10 195 263 2.5E-5 T 23-04-2016 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 Gene3D G3DSA:3.50.50.60 103 292 5.7E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 167 6.0E-7 T 23-04-2016 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 272 6.0E-7 T 23-04-2016 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 6.0E-7 T 23-04-2016 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 Gene3D G3DSA:3.50.50.60 2 102 9.1E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 2.4E-7 T 23-04-2016 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 95 113 2.4E-7 T 23-04-2016 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 250 272 2.4E-7 T 23-04-2016 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.4E-7 T 23-04-2016 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 SUPERFAMILY SSF51905 143 295 1.57E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 287 2.7E-35 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 PANTHER PTHR22912 75 287 4.5E-21 T 23-04-2016 SHYC_RS09345 a933b77cb0de3e56ff5ada18eca43ac8 354 SUPERFAMILY SSF51905 1 182 5.76E-18 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS08595 d070632b9a3f1d70aaee541e845e91c8 90 Gene3D G3DSA:1.10.220.80 12 85 1.5E-28 T 23-04-2016 IPR023324 BH2638-like domain SHYC_RS08595 d070632b9a3f1d70aaee541e845e91c8 90 PANTHER PTHR41305 2 90 3.9E-29 T 23-04-2016 SHYC_RS08595 d070632b9a3f1d70aaee541e845e91c8 90 SUPERFAMILY SSF158504 4 84 1.31E-30 T 23-04-2016 IPR023324 BH2638-like domain SHYC_RS08595 d070632b9a3f1d70aaee541e845e91c8 90 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 1 85 1.0E-25 T 23-04-2016 IPR007920 Protein of unknown function UPF0223 SHYC_RS08595 d070632b9a3f1d70aaee541e845e91c8 90 Pfam PF05256 Uncharacterised protein family (UPF0223) 2 85 6.8E-33 T 23-04-2016 IPR007920 Protein of unknown function UPF0223 SHYC_RS08595 d070632b9a3f1d70aaee541e845e91c8 90 PIRSF PIRSF037260 1 90 2.8E-35 T 23-04-2016 IPR007920 Protein of unknown function UPF0223 SHYC_RS03270 49ba5682d48ba44972cfd818f57dbbb7 171 Gene3D G3DSA:3.40.1400.10 1 155 2.2E-53 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03270 49ba5682d48ba44972cfd818f57dbbb7 171 Hamap MF_01556 Galactose-6-phosphate isomerase subunit LacB [lacB]. 1 171 47.836 T 23-04-2016 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03270 49ba5682d48ba44972cfd818f57dbbb7 171 Pfam PF02502 Ribose/Galactose Isomerase 3 141 8.8E-42 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03270 49ba5682d48ba44972cfd818f57dbbb7 171 TIGRFAM TIGR01119 lacB: galactose-6-phosphate isomerase, LacB subunit 1 171 2.1E-104 T 23-04-2016 IPR004784 Galactose-6-phosphate isomerase subunit LacB GO:0005990|GO:0016861|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03270 49ba5682d48ba44972cfd818f57dbbb7 171 PANTHER PTHR30345:SF4 1 171 4.6E-128 T 23-04-2016 SHYC_RS03270 49ba5682d48ba44972cfd818f57dbbb7 171 SUPERFAMILY SSF89623 1 151 2.62E-49 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03270 49ba5682d48ba44972cfd818f57dbbb7 171 PANTHER PTHR30345 1 171 4.6E-128 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03270 49ba5682d48ba44972cfd818f57dbbb7 171 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 1.4E-36 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03270 49ba5682d48ba44972cfd818f57dbbb7 171 PIRSF PIRSF005384 1 148 6.5E-51 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 455 43.145 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 5.3E-68 T 23-04-2016 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 5.3E-68 T 23-04-2016 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 5.3E-68 T 23-04-2016 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 5.3E-68 T 23-04-2016 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 5.3E-68 T 23-04-2016 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 5.3E-68 T 23-04-2016 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 Gene3D G3DSA:1.20.200.10 109 376 5.3E-105 T 23-04-2016 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 Pfam PF00206 Lyase 8 302 6.6E-78 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 SUPERFAMILY SSF48557 8 456 1.88E-147 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 6 455 2.0E-196 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 Gene3D G3DSA:1.10.275.10 4 108 6.0E-40 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PANTHER PTHR11444 4 457 1.1E-232 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 Pfam PF14698 Argininosuccinate lyase C-terminal 365 432 8.8E-21 T 23-04-2016 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 Gene3D G3DSA:1.10.40.30 377 433 4.0E-24 T 23-04-2016 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PANTHER PTHR11444:SF3 4 457 1.1E-232 T 23-04-2016 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 3.2E-30 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 3.2E-30 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 3.2E-30 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS09230 20e8cab671cdbbabf26a79123904d9d0 457 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 3.2E-30 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS00640 c51622a99eab340f90f83e782b05a7ce 331 PANTHER PTHR30472 4 331 1.2E-173 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS00640 c51622a99eab340f90f83e782b05a7ce 331 SUPERFAMILY SSF81345 7 326 6.28E-73 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS00640 c51622a99eab340f90f83e782b05a7ce 331 Gene3D G3DSA:1.10.3470.10 8 327 1.9E-89 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS00640 c51622a99eab340f90f83e782b05a7ce 331 Pfam PF01032 FecCD transport family 16 326 1.2E-85 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS00640 c51622a99eab340f90f83e782b05a7ce 331 PANTHER PTHR30472:SF17 4 331 1.2E-173 T 23-04-2016 SHYC_RS11030 61447a48e4776a352f9e9aa448d8fa95 84 PANTHER PTHR34477 1 81 6.2E-34 T 23-04-2016 SHYC_RS11030 61447a48e4776a352f9e9aa448d8fa95 84 SMART SM00465 3 82 0.0023 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily SHYC_RS11030 61447a48e4776a352f9e9aa448d8fa95 84 PANTHER PTHR34477:SF1 1 81 6.2E-34 T 23-04-2016 SHYC_RS11030 61447a48e4776a352f9e9aa448d8fa95 84 Pfam PF01541 GIY-YIG catalytic domain 4 74 5.7E-19 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily SHYC_RS11030 61447a48e4776a352f9e9aa448d8fa95 84 SUPERFAMILY SSF82771 4 73 3.66E-15 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 PANTHER PTHR11706 1 445 1.6E-171 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 28 408 7.7E-109 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 PANTHER PTHR11706:SF33 1 445 1.6E-171 T 23-04-2016 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 14 441 36.195 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 Pfam PF01566 Natural resistance-associated macrophage protein 49 415 2.3E-112 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 PRINTS PR00447 Natural resistance-associated macrophage protein signature 384 403 1.5E-59 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 PRINTS PR00447 Natural resistance-associated macrophage protein signature 322 341 1.5E-59 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 PRINTS PR00447 Natural resistance-associated macrophage protein signature 108 134 1.5E-59 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 PRINTS PR00447 Natural resistance-associated macrophage protein signature 161 182 1.5E-59 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 PRINTS PR00447 Natural resistance-associated macrophage protein signature 213 236 1.5E-59 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 PRINTS PR00447 Natural resistance-associated macrophage protein signature 136 155 1.5E-59 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS00960 b707520d7d7fd40438a095a04289709e 445 PRINTS PR00447 Natural resistance-associated macrophage protein signature 350 367 1.5E-59 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS04080 a10896a4dc2add3ae656135d82a0c3d1 518 Gene3D G3DSA:3.30.420.40 250 496 3.1E-56 T 23-04-2016 SHYC_RS04080 a10896a4dc2add3ae656135d82a0c3d1 518 PANTHER PTHR10196 2 504 1.1E-201 T 23-04-2016 SHYC_RS04080 a10896a4dc2add3ae656135d82a0c3d1 518 SUPERFAMILY SSF53067 5 247 3.63E-60 T 23-04-2016 SHYC_RS04080 a10896a4dc2add3ae656135d82a0c3d1 518 SUPERFAMILY SSF53067 250 494 2.43E-57 T 23-04-2016 SHYC_RS04080 a10896a4dc2add3ae656135d82a0c3d1 518 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 360 380 - T 23-04-2016 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SHYC_RS04080 a10896a4dc2add3ae656135d82a0c3d1 518 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 446 7.5E-31 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SHYC_RS04080 a10896a4dc2add3ae656135d82a0c3d1 518 Gene3D G3DSA:3.30.420.40 3 246 2.9E-64 T 23-04-2016 SHYC_RS04080 a10896a4dc2add3ae656135d82a0c3d1 518 PIRSF PIRSF000538 2 501 1.1E-129 T 23-04-2016 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|UniPathway: UPA00618 SHYC_RS04080 a10896a4dc2add3ae656135d82a0c3d1 518 PANTHER PTHR10196:SF41 2 504 1.1E-201 T 23-04-2016 SHYC_RS04080 a10896a4dc2add3ae656135d82a0c3d1 518 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 246 1.0E-59 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SHYC_RS03990 dc99cb64f9fe01cf86f7c6bb2cde312c 240 Gene3D G3DSA:3.40.50.2300 2 126 4.0E-14 T 23-04-2016 SHYC_RS03990 dc99cb64f9fe01cf86f7c6bb2cde312c 240 PANTHER PTHR26402:SF472 1 125 9.4E-35 T 23-04-2016 SHYC_RS03990 dc99cb64f9fe01cf86f7c6bb2cde312c 240 SUPERFAMILY SSF52172 1 132 6.4E-13 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS03990 dc99cb64f9fe01cf86f7c6bb2cde312c 240 Gene3D G3DSA:2.40.50.40 142 206 1.9E-12 T 23-04-2016 SHYC_RS03990 dc99cb64f9fe01cf86f7c6bb2cde312c 240 Pfam PF04397 LytTr DNA-binding domain 151 240 2.8E-18 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SHYC_RS03990 dc99cb64f9fe01cf86f7c6bb2cde312c 240 PANTHER PTHR26402 1 125 9.4E-35 T 23-04-2016 SHYC_RS03990 dc99cb64f9fe01cf86f7c6bb2cde312c 240 SMART SM00850 149 240 5.5E-11 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SHYC_RS03990 dc99cb64f9fe01cf86f7c6bb2cde312c 240 Pfam PF00072 Response regulator receiver domain 3 120 1.0E-22 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS03990 dc99cb64f9fe01cf86f7c6bb2cde312c 240 SMART SM00448 1 120 6.3E-14 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 PANTHER PTHR11963:SF13 64 490 4.9E-158 T 23-04-2016 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 Gene3D G3DSA:3.40.630.10 160 488 8.6E-116 T 23-04-2016 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 SUPERFAMILY SSF53187 169 488 1.7E-106 T 23-04-2016 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 172 482 1.9E-100 T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 PRINTS PR00481 Cytosol aminopeptidase signature 359 374 2.6E-48 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 PRINTS PR00481 Cytosol aminopeptidase signature 331 351 2.6E-48 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 PRINTS PR00481 Cytosol aminopeptidase signature 309 330 2.6E-48 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 PRINTS PR00481 Cytosol aminopeptidase signature 272 293 2.6E-48 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 PRINTS PR00481 Cytosol aminopeptidase signature 250 267 2.6E-48 T 23-04-2016 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 335 342 - T 23-04-2016 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 SUPERFAMILY SSF52949 8 170 7.65E-15 T 23-04-2016 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 PANTHER PTHR11963 64 490 4.9E-158 T 23-04-2016 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 Gene3D G3DSA:3.40.220.10 61 143 3.7E-8 T 23-04-2016 SHYC_RS09325 ef32b82759bf7f78c93090e6fae6212a 496 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 32 139 9.4E-11 T 23-04-2016 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 SHYC_RS11890 8d88387e42b88d7c35d67c59f5e4fd34 295 Gene3D G3DSA:3.10.350.10 66 95 3.4E-4 T 23-04-2016 IPR018392 LysM domain SHYC_RS11890 8d88387e42b88d7c35d67c59f5e4fd34 295 Pfam PF01476 LysM domain 67 105 7.9E-5 T 23-04-2016 IPR018392 LysM domain SHYC_RS11890 8d88387e42b88d7c35d67c59f5e4fd34 295 PANTHER PTHR33308 193 295 1.3E-24 T 23-04-2016 SHYC_RS11890 8d88387e42b88d7c35d67c59f5e4fd34 295 SUPERFAMILY SSF54106 65 107 2.62E-6 T 23-04-2016 IPR018392 LysM domain SHYC_RS11890 8d88387e42b88d7c35d67c59f5e4fd34 295 PANTHER PTHR33308:SF2 193 295 1.3E-24 T 23-04-2016 SHYC_RS11890 8d88387e42b88d7c35d67c59f5e4fd34 295 Pfam PF05257 CHAP domain 196 273 4.4E-14 T 23-04-2016 IPR007921 CHAP domain SHYC_RS11890 8d88387e42b88d7c35d67c59f5e4fd34 295 SUPERFAMILY SSF54001 187 279 2.45E-20 T 23-04-2016 SHYC_RS00120 9eea1e38be67429890fb3338a4a0c41c 109 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 104 4.6E-19 T 23-04-2016 IPR008407 Branched-chain amino acid transport, AzlD SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 PANTHER PTHR23402:SF1 1 212 3.2E-53 T 23-04-2016 SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 PANTHER PTHR23402 1 212 3.2E-53 T 23-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 Gene3D G3DSA:3.40.630.20 1 207 1.7E-60 T 23-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 PIRSF PIRSF015592 1 211 6.0E-72 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 Pfam PF01470 Pyroglutamyl peptidase 1 201 5.2E-74 T 23-04-2016 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 128 142 - T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 67 83 - T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 4.3E-38 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 3 26 4.3E-38 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 78 98 4.3E-38 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 60 72 4.3E-38 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 130 146 4.3E-38 T 23-04-2016 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 212 6.7E-67 T 23-04-2016 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 SHYC_RS02795 1773868592c24de9376ddeee14c4ba60 213 SUPERFAMILY SSF53182 1 210 2.35E-61 T 23-04-2016 SHYC_RS07155 d8506d5a7455335142b7e35762e825c9 175 Gene3D G3DSA:3.30.1060.10 2 154 2.0E-68 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS07155 d8506d5a7455335142b7e35762e825c9 175 PANTHER PTHR10173 1 149 5.1E-66 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SHYC_RS07155 d8506d5a7455335142b7e35762e825c9 175 PANTHER PTHR10173:SF6 1 149 5.1E-66 T 23-04-2016 SHYC_RS07155 d8506d5a7455335142b7e35762e825c9 175 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 160 36.682 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS07155 d8506d5a7455335142b7e35762e825c9 175 SUPERFAMILY SSF55068 2 165 2.09E-71 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS07155 d8506d5a7455335142b7e35762e825c9 175 Pfam PF01625 Peptide methionine sulfoxide reductase 4 154 6.7E-60 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS07155 d8506d5a7455335142b7e35762e825c9 175 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 153 1.2E-59 T 23-04-2016 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 SHYC_RS03220 5c97a3c16e59c46f36cf2adf61b2347c 145 PIRSF PIRSF002181 1 143 1.6E-49 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03220 5c97a3c16e59c46f36cf2adf61b2347c 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 23-04-2016 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 SHYC_RS03220 5c97a3c16e59c46f36cf2adf61b2347c 145 PANTHER PTHR11545 1 144 1.3E-75 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03220 5c97a3c16e59c46f36cf2adf61b2347c 145 Gene3D G3DSA:3.90.1180.10 4 142 1.7E-62 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SHYC_RS03220 5c97a3c16e59c46f36cf2adf61b2347c 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 27.507 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03220 5c97a3c16e59c46f36cf2adf61b2347c 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 4.0E-61 T 23-04-2016 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 SHYC_RS03220 5c97a3c16e59c46f36cf2adf61b2347c 145 SUPERFAMILY SSF52161 5 143 1.57E-56 T 23-04-2016 IPR023564 Ribosomal protein L13 domain GO:0003735|GO:0005840|GO:0006412 SHYC_RS03220 5c97a3c16e59c46f36cf2adf61b2347c 145 Pfam PF00572 Ribosomal protein L13 15 139 2.3E-54 T 23-04-2016 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 SHYC_RS06365 99a42313c89ccca715dbdf69654da85e 268 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 263 32.917 T 23-04-2016 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06365 99a42313c89ccca715dbdf69654da85e 268 PANTHER PTHR21089 1 265 4.9E-95 T 23-04-2016 SHYC_RS06365 99a42313c89ccca715dbdf69654da85e 268 Gene3D G3DSA:3.40.50.720 105 265 4.9E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06365 99a42313c89ccca715dbdf69654da85e 268 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 112 183 3.7E-9 T 23-04-2016 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase SHYC_RS06365 99a42313c89ccca715dbdf69654da85e 268 Gene3D G3DSA:3.40.192.10 2 104 7.9E-44 T 23-04-2016 SHYC_RS06365 99a42313c89ccca715dbdf69654da85e 268 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 265 1.9E-83 T 23-04-2016 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06365 99a42313c89ccca715dbdf69654da85e 268 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 5 87 1.2E-31 T 23-04-2016 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06365 99a42313c89ccca715dbdf69654da85e 268 SUPERFAMILY SSF51735 100 263 4.87E-40 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06365 99a42313c89ccca715dbdf69654da85e 268 SUPERFAMILY SSF53223 2 99 5.35E-34 T 23-04-2016 SHYC_RS10120 ebebad3d2968eb7fc1bcbf9255eb04bd 66 Gene3D G3DSA:3.10.20.30 1 66 7.1E-23 T 23-04-2016 IPR012675 Beta-grasp domain SHYC_RS10120 ebebad3d2968eb7fc1bcbf9255eb04bd 66 SUPERFAMILY SSF54285 3 65 6.25E-17 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHYC_RS10120 ebebad3d2968eb7fc1bcbf9255eb04bd 66 PANTHER PTHR34472 1 66 7.8E-20 T 23-04-2016 SHYC_RS10120 ebebad3d2968eb7fc1bcbf9255eb04bd 66 Pfam PF02597 ThiS family 5 66 1.5E-14 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SHYC_RS10120 ebebad3d2968eb7fc1bcbf9255eb04bd 66 PANTHER PTHR34472:SF1 1 66 7.8E-20 T 23-04-2016 SHYC_RS10120 ebebad3d2968eb7fc1bcbf9255eb04bd 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 66 9.4E-23 T 23-04-2016 IPR010035 ThiS, thiamine-biosynthesis SHYC_RS01665 b89ee60d5ee326074e437f1a2743a927 453 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 446 3.7E-211 T 23-04-2016 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 SHYC_RS01665 b89ee60d5ee326074e437f1a2743a927 453 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 425 6.1E-146 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 SHYC_RS01665 b89ee60d5ee326074e437f1a2743a927 453 Pfam PF07690 Major Facilitator Superfamily 34 406 1.5E-46 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS01665 b89ee60d5ee326074e437f1a2743a927 453 SUPERFAMILY SSF103473 11 444 6.02E-77 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS01665 b89ee60d5ee326074e437f1a2743a927 453 Gene3D G3DSA:1.20.1250.20 23 231 1.2E-46 T 23-04-2016 SHYC_RS01665 b89ee60d5ee326074e437f1a2743a927 453 Gene3D G3DSA:1.20.1250.20 254 447 8.5E-44 T 23-04-2016 SHYC_RS01665 b89ee60d5ee326074e437f1a2743a927 453 PANTHER PTHR11662:SF141 1 449 1.0E-222 T 23-04-2016 SHYC_RS01665 b89ee60d5ee326074e437f1a2743a927 453 PIRSF PIRSF002808 5 453 8.9E-158 T 23-04-2016 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 SHYC_RS01665 b89ee60d5ee326074e437f1a2743a927 453 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 23-04-2016 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 SHYC_RS01665 b89ee60d5ee326074e437f1a2743a927 453 PANTHER PTHR11662 1 449 1.0E-222 T 23-04-2016 SHYC_RS10440 070b093e0b6b888630fbc10304546575 452 PIRSF PIRSF006060 1 452 1.8E-77 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS10440 070b093e0b6b888630fbc10304546575 452 PANTHER PTHR11785:SF261 8 451 3.8E-101 T 23-04-2016 SHYC_RS10440 070b093e0b6b888630fbc10304546575 452 PANTHER PTHR11785 8 451 3.8E-101 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS10440 070b093e0b6b888630fbc10304546575 452 Pfam PF13520 Amino acid permease 12 421 4.0E-57 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 ProSitePatterns PS00221 MIP family signature. 62 70 - T 23-04-2016 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 Pfam PF00230 Major intrinsic protein 4 230 8.8E-45 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 SUPERFAMILY SSF81338 3 234 3.92E-72 T 23-04-2016 IPR023271 Aquaporin-like SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 Gene3D G3DSA:1.20.1080.10 2 235 2.7E-89 T 23-04-2016 IPR023271 Aquaporin-like SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 PANTHER PTHR19139:SF147 1 235 1.4E-98 T 23-04-2016 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 PANTHER PTHR19139 1 235 1.4E-98 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 2.9E-59 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 PRINTS PR00783 Major intrinsic protein family signature 44 68 2.4E-43 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.4E-43 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 PRINTS PR00783 Major intrinsic protein family signature 213 233 2.4E-43 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 PRINTS PR00783 Major intrinsic protein family signature 81 100 2.4E-43 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 PRINTS PR00783 Major intrinsic protein family signature 136 154 2.4E-43 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS07660 43d1b0bba1e1c39f825e409c3402dc3c 271 PRINTS PR00783 Major intrinsic protein family signature 166 188 2.4E-43 T 23-04-2016 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 SHYC_RS10330 113ea8ff0712133a46eb255c3a5a2df4 183 Pfam PF00589 Phage integrase family 10 168 3.9E-23 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS10330 113ea8ff0712133a46eb255c3a5a2df4 183 SUPERFAMILY SSF56349 9 175 7.65E-32 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHYC_RS10330 113ea8ff0712133a46eb255c3a5a2df4 183 PANTHER PTHR30349 4 179 2.4E-24 T 23-04-2016 SHYC_RS10330 113ea8ff0712133a46eb255c3a5a2df4 183 Gene3D G3DSA:1.10.443.10 11 175 2.5E-29 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS10330 113ea8ff0712133a46eb255c3a5a2df4 183 PANTHER PTHR30349:SF34 4 179 2.4E-24 T 23-04-2016 SHYC_RS09820 b7c0ee891f0ddfd0349ed1601c8e8302 129 PANTHER PTHR37297:SF1 1 123 8.7E-41 T 23-04-2016 SHYC_RS09820 b7c0ee891f0ddfd0349ed1601c8e8302 129 Hamap MF_00128 Protein NrdI [nrdI]. 1 124 26.623 T 23-04-2016 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial SHYC_RS09820 b7c0ee891f0ddfd0349ed1601c8e8302 129 PIRSF PIRSF005087 1 128 1.6E-38 T 23-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SHYC_RS09820 b7c0ee891f0ddfd0349ed1601c8e8302 129 Gene3D G3DSA:3.40.50.360 1 123 1.8E-37 T 23-04-2016 IPR029039 Flavoprotein-like domain SHYC_RS09820 b7c0ee891f0ddfd0349ed1601c8e8302 129 TIGRFAM TIGR00333 nrdI: nrdI protein 3 121 3.1E-34 T 23-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SHYC_RS09820 b7c0ee891f0ddfd0349ed1601c8e8302 129 SUPERFAMILY SSF52218 2 123 2.79E-20 T 23-04-2016 IPR029039 Flavoprotein-like domain SHYC_RS09820 b7c0ee891f0ddfd0349ed1601c8e8302 129 Pfam PF07972 NrdI Flavodoxin like 3 114 1.5E-32 T 23-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SHYC_RS09820 b7c0ee891f0ddfd0349ed1601c8e8302 129 PANTHER PTHR37297 1 123 8.7E-41 T 23-04-2016 SHYC_RS09845 ccfdc72b27ab39b87a7b06f5fc7c6d21 176 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 6 172 2.6E-40 T 23-04-2016 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 KEGG: 00051+3.1.3.-|KEGG: 00332+3.1.3.-|KEGG: 00565+3.1.3.-|KEGG: 00600+3.1.3.-|KEGG: 00730+3.1.3.-|KEGG: 00740+3.1.3.-|KEGG: 00760+3.1.3.-|Reactome: REACT_1698 SHYC_RS09845 ccfdc72b27ab39b87a7b06f5fc7c6d21 176 PANTHER PTHR16504 1 175 1.0E-75 T 23-04-2016 SHYC_RS09845 ccfdc72b27ab39b87a7b06f5fc7c6d21 176 PANTHER PTHR16504:SF7 1 175 1.0E-75 T 23-04-2016 SHYC_RS09845 ccfdc72b27ab39b87a7b06f5fc7c6d21 176 Gene3D G3DSA:1.10.40.40 17 57 8.4E-20 T 23-04-2016 SHYC_RS09845 ccfdc72b27ab39b87a7b06f5fc7c6d21 176 Gene3D G3DSA:3.40.50.1000 58 175 1.3E-47 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS09845 ccfdc72b27ab39b87a7b06f5fc7c6d21 176 SUPERFAMILY SSF56784 4 174 1.13E-30 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 Pfam PF00698 Acyl transferase domain 5 285 1.4E-38 T 23-04-2016 IPR014043 Acyl transferase SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 300 2.0E-29 T 23-04-2016 IPR020801 Polyketide synthase, acyl transferase domain SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 PANTHER PTHR10982 1 307 8.2E-129 T 23-04-2016 SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 Gene3D G3DSA:3.40.366.10 2 119 8.1E-70 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 Gene3D G3DSA:3.40.366.10 195 303 8.1E-70 T 23-04-2016 IPR001227 Acyl transferase domain GO:0008152|GO:0016740 SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 SUPERFAMILY SSF52151 4 119 3.14E-72 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 SUPERFAMILY SSF52151 188 305 3.14E-72 T 23-04-2016 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 Gene3D G3DSA:3.30.70.250 123 194 7.0E-27 T 23-04-2016 SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 PIRSF PIRSF000446 1 307 4.6E-98 T 23-04-2016 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388|UniPathway: UPA00094 SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 SUPERFAMILY SSF55048 127 195 1.29E-15 T 23-04-2016 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 SHYC_RS08040 b08f0a1d7cd4a6f57a54437448978960 308 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 289 1.8E-96 T 23-04-2016 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 SHYC_RS07700 2ab976b2e8a136eccc102b4db52b2624 98 SUPERFAMILY SSF89957 3 96 5.36E-22 T 23-04-2016 IPR029756 MTH1187/YkoF-like SHYC_RS07700 2ab976b2e8a136eccc102b4db52b2624 98 PANTHER PTHR33777 1 98 4.7E-23 T 23-04-2016 SHYC_RS07700 2ab976b2e8a136eccc102b4db52b2624 98 Pfam PF01910 Thiamine-binding protein 6 94 7.6E-20 T 23-04-2016 IPR002767 Thiamine-binding protein SHYC_RS07700 2ab976b2e8a136eccc102b4db52b2624 98 Gene3D G3DSA:3.30.70.930 1 97 2.4E-35 T 23-04-2016 IPR029756 MTH1187/YkoF-like SHYC_RS11250 486dcbfce4cea83f08582831c9d8d006 130 Pfam PF16888 Domain of unknown function (DUF5082) 10 126 1.4E-11 T 23-04-2016 IPR031681 Protein of unknown function DUF5082 SHYC_RS09235 af43fa370ace7175e088d3a90f868c20 313 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 62 305 1.4E-49 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SHYC_RS09235 af43fa370ace7175e088d3a90f868c20 313 PANTHER PTHR23344 60 312 3.8E-80 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SHYC_RS09235 af43fa370ace7175e088d3a90f868c20 313 SUPERFAMILY SSF51695 56 311 6.8E-72 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SHYC_RS09235 af43fa370ace7175e088d3a90f868c20 313 Gene3D G3DSA:3.20.20.190 50 312 5.5E-88 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 TIGRFAM TIGR00277 HDIG: HDIG domain 331 408 2.9E-24 T 23-04-2016 IPR006675 HDIG domain SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 Pfam PF01966 HD domain 336 427 2.2E-19 T 23-04-2016 IPR006674 HD domain SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 Pfam PF00013 KH domain 213 270 1.3E-6 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 SUPERFAMILY SSF54791 207 303 8.5E-17 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 Gene3D G3DSA:3.30.1370.10 219 294 6.2E-8 T 23-04-2016 IPR004088 K Homology domain, type 1 GO:0003723 SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 Hamap MF_00335 Ribonuclease Y [rny]. 4 519 25.611 T 23-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 SMART SM00322 207 274 3.0E-7 T 23-04-2016 IPR004087 K Homology domain GO:0003676 SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 PANTHER PTHR12826 189 518 3.4E-143 T 23-04-2016 SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 7 519 2.4E-239 T 23-04-2016 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 Pfam PF12072 Domain of unknown function (DUF3552) 6 204 3.4E-63 T 23-04-2016 IPR022711 Ribonuclease Y, N-terminal SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 SUPERFAMILY SSF109604 318 469 1.21E-30 T 23-04-2016 SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 SMART SM00471 331 437 3.8E-12 T 23-04-2016 IPR003607 HD/PDEase domain SHYC_RS07735 98bf9c4e55758bf33ab2b5b06a0fd796 519 Gene3D G3DSA:1.10.3210.10 314 495 8.1E-46 T 23-04-2016 IPR006674 HD domain SHYC_RS02940 398ecf11baaa1e1438882e455d7a1638 204 SMART SM00382 23 204 1.7E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS02940 398ecf11baaa1e1438882e455d7a1638 204 SUPERFAMILY SSF52540 6 200 3.27E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02940 398ecf11baaa1e1438882e455d7a1638 204 Pfam PF00005 ABC transporter 24 154 9.0E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS02940 398ecf11baaa1e1438882e455d7a1638 204 PANTHER PTHR24220 26 198 3.4E-55 T 23-04-2016 SHYC_RS02940 398ecf11baaa1e1438882e455d7a1638 204 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS02940 398ecf11baaa1e1438882e455d7a1638 204 Gene3D G3DSA:3.40.50.300 17 198 1.4E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05995 182bcfa8e2b86b978dc04988c47d407f 155 PANTHER PTHR30455:SF2 2 155 1.6E-68 T 23-04-2016 SHYC_RS05995 182bcfa8e2b86b978dc04988c47d407f 155 PANTHER PTHR30455 2 155 1.6E-68 T 23-04-2016 SHYC_RS05995 182bcfa8e2b86b978dc04988c47d407f 155 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 76.652 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SHYC_RS05995 182bcfa8e2b86b978dc04988c47d407f 155 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 144 6.9E-58 T 23-04-2016 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 SHYC_RS05995 182bcfa8e2b86b978dc04988c47d407f 155 Pfam PF03477 ATP cone domain 50 136 1.3E-18 T 23-04-2016 IPR005144 ATP-cone domain SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 PANTHER PTHR22749:SF3 1 312 4.7E-151 T 23-04-2016 SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 Pfam PF01687 Riboflavin kinase 185 310 6.0E-36 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 PIRSF PIRSF004491 2 317 1.6E-102 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 SUPERFAMILY SSF82114 175 312 2.16E-43 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 22 311 5.5E-89 T 23-04-2016 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 SUPERFAMILY SSF52374 19 177 9.01E-30 T 23-04-2016 SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 SMART SM00904 184 312 6.3E-56 T 23-04-2016 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 PANTHER PTHR22749 1 312 4.7E-151 T 23-04-2016 IPR023468 Riboflavin kinase KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|UniPathway: UPA00276 SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 Gene3D G3DSA:2.40.30.30 181 312 8.1E-42 T 23-04-2016 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 Pfam PF06574 FAD synthetase 16 167 1.2E-50 T 23-04-2016 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00276|UniPathway: UPA00277 SHYC_RS07810 2ee1a6f057f76bb2530eb4a2b92ec298 323 Gene3D G3DSA:3.40.50.620 7 180 9.9E-57 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS07945 ae03afb57154182a133454973526a809 388 SUPERFAMILY SSF52210 239 386 1.83E-53 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SHYC_RS07945 ae03afb57154182a133454973526a809 388 Pfam PF08442 ATP-grasp domain 2 202 2.6E-82 T 23-04-2016 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SHYC_RS07945 ae03afb57154182a133454973526a809 388 Gene3D G3DSA:3.30.1490.20 22 95 6.4E-34 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS07945 ae03afb57154182a133454973526a809 388 Gene3D G3DSA:3.30.470.20 96 239 3.1E-60 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS07945 ae03afb57154182a133454973526a809 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 6.1E-166 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SHYC_RS07945 ae03afb57154182a133454973526a809 388 Hamap MF_00558 Succinyl-CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.27 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SHYC_RS07945 ae03afb57154182a133454973526a809 388 Pfam PF00549 CoA-ligase 262 380 6.9E-24 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SHYC_RS07945 ae03afb57154182a133454973526a809 388 PANTHER PTHR11815 1 387 4.1E-230 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SHYC_RS07945 ae03afb57154182a133454973526a809 388 Gene3D G3DSA:3.40.50.261 241 385 6.9E-65 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SHYC_RS07945 ae03afb57154182a133454973526a809 388 PIRSF PIRSF001554 1 388 2.4E-156 T 23-04-2016 IPR005809 Succinyl-CoA synthetase, beta subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: REACT_1046|UniPathway: UPA00223 SHYC_RS07945 ae03afb57154182a133454973526a809 388 SUPERFAMILY SSF56059 1 238 7.58E-83 T 23-04-2016 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 23-04-2016 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 8.9E-251 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 SUPERFAMILY SSF52029 182 374 1.02E-81 T 23-04-2016 IPR027409 GroEL-like apical domain SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 PANTHER PTHR11353 1 539 4.2E-244 T 23-04-2016 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 Gene3D G3DSA:1.10.560.10 3 184 2.3E-47 T 23-04-2016 IPR027413 GroEL-like equatorial domain SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 PRINTS PR00298 60kDa chaperonin signature 396 417 6.4E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 PRINTS PR00298 60kDa chaperonin signature 82 109 6.4E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 PRINTS PR00298 60kDa chaperonin signature 26 52 6.4E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 PRINTS PR00298 60kDa chaperonin signature 348 373 6.4E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 PRINTS PR00298 60kDa chaperonin signature 266 289 6.4E-73 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 Gene3D G3DSA:3.50.7.10 185 366 1.2E-96 T 23-04-2016 IPR027409 GroEL-like apical domain SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 SUPERFAMILY SSF54849 137 203 3.89E-26 T 23-04-2016 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 SUPERFAMILY SSF48592 6 133 3.91E-78 T 23-04-2016 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 SUPERFAMILY SSF48592 404 518 3.91E-78 T 23-04-2016 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 Hamap MF_00600 60 kDa chaperonin [groL]. 1 538 40.997 T 23-04-2016 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 Gene3D G3DSA:1.10.560.10 367 515 2.2E-43 T 23-04-2016 IPR027413 GroEL-like equatorial domain SHYC_RS04030 60f5073b2c773caacdebbf5784f30fc1 539 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 520 9.3E-103 T 23-04-2016 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 SHYC_RS09885 b321befb7758593af913fc3b366bc8e2 334 Pfam PF02626 Allophanate hydrolase subunit 2 25 299 6.9E-71 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHYC_RS09885 b321befb7758593af913fc3b366bc8e2 334 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 7 321 1.5E-71 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHYC_RS09885 b321befb7758593af913fc3b366bc8e2 334 PANTHER PTHR18866 163 307 9.4E-34 T 23-04-2016 SHYC_RS09885 b321befb7758593af913fc3b366bc8e2 334 SMART SM00797 24 316 2.2E-98 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHYC_RS09885 b321befb7758593af913fc3b366bc8e2 334 SUPERFAMILY SSF50891 200 303 2.16E-6 T 23-04-2016 IPR029000 Cyclophilin-like domain SHYC_RS09885 b321befb7758593af913fc3b366bc8e2 334 PANTHER PTHR18866:SF74 163 307 9.4E-34 T 23-04-2016 SHYC_RS02315 b7e835a848c5f7f0c97f46e845c6ca44 225 PIRSF PIRSF036692 5 225 1.4E-57 T 23-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SHYC_RS02315 b7e835a848c5f7f0c97f46e845c6ca44 225 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 7 212 2.0E-51 T 23-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SHYC_RS02315 b7e835a848c5f7f0c97f46e845c6ca44 225 Pfam PF03315 Serine dehydratase beta chain 16 87 4.9E-12 T 23-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SHYC_RS02315 b7e835a848c5f7f0c97f46e845c6ca44 225 PANTHER PTHR30182:SF2 1 225 6.9E-73 T 23-04-2016 SHYC_RS02315 b7e835a848c5f7f0c97f46e845c6ca44 225 SUPERFAMILY SSF143548 23 139 1.07E-26 T 23-04-2016 IPR029009 Allosteric substrate binding domain SHYC_RS02315 b7e835a848c5f7f0c97f46e845c6ca44 225 PANTHER PTHR30182 1 225 6.9E-73 T 23-04-2016 SHYC_RS02315 b7e835a848c5f7f0c97f46e845c6ca44 225 Gene3D G3DSA:3.30.1330.90 17 139 5.5E-26 T 23-04-2016 IPR029009 Allosteric substrate binding domain SHYC_RS06630 f6c9dfcd5f203564ebe89f6dbe266b3e 479 Pfam PF01694 Rhomboid family 198 331 4.0E-33 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SHYC_RS06630 f6c9dfcd5f203564ebe89f6dbe266b3e 479 Gene3D G3DSA:1.25.40.10 376 478 3.9E-15 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS06630 f6c9dfcd5f203564ebe89f6dbe266b3e 479 SUPERFAMILY SSF48452 365 478 1.16E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS06630 f6c9dfcd5f203564ebe89f6dbe266b3e 479 Pfam PF14853 Fis1 C-terminal tetratricopeptide repeat 438 479 7.8E-6 T 23-04-2016 IPR028061 Fis1, C-terminal tetratricopeptide repeat SHYC_RS06630 f6c9dfcd5f203564ebe89f6dbe266b3e 479 PANTHER PTHR22936 148 367 2.0E-38 T 23-04-2016 IPR002610 Peptidase S54, rhomboid GO:0004252|GO:0006508|GO:0016021 SHYC_RS06630 f6c9dfcd5f203564ebe89f6dbe266b3e 479 SUPERFAMILY SSF144091 153 336 5.23E-40 T 23-04-2016 SHYC_RS06630 f6c9dfcd5f203564ebe89f6dbe266b3e 479 Gene3D G3DSA:1.20.1540.10 156 331 1.6E-40 T 23-04-2016 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 SHYC_RS04340 71a9d53fd9be90d8da82cbb1a7308781 172 SUPERFAMILY SSF54637 6 155 2.07E-45 T 23-04-2016 IPR029069 HotDog domain SHYC_RS04340 71a9d53fd9be90d8da82cbb1a7308781 172 Gene3D G3DSA:3.10.129.10 6 160 4.3E-52 T 23-04-2016 IPR029069 HotDog domain SHYC_RS04340 71a9d53fd9be90d8da82cbb1a7308781 172 Pfam PF03061 Thioesterase superfamily 28 99 7.2E-17 T 23-04-2016 IPR006683 Thioesterase domain SHYC_RS04340 71a9d53fd9be90d8da82cbb1a7308781 172 PANTHER PTHR11049 7 155 3.8E-59 T 23-04-2016 SHYC_RS04350 3aadbcf0baf0457a264120a4dfce2efc 172 SUPERFAMILY SSF52317 1 170 1.33E-41 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS04350 3aadbcf0baf0457a264120a4dfce2efc 172 Pfam PF01965 DJ-1/PfpI family 3 167 4.3E-51 T 23-04-2016 IPR002818 DJ-1/PfpI SHYC_RS04350 3aadbcf0baf0457a264120a4dfce2efc 172 Gene3D G3DSA:3.40.50.880 1 171 1.2E-47 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS04350 3aadbcf0baf0457a264120a4dfce2efc 172 PANTHER PTHR11019:SF87 1 172 6.1E-91 T 23-04-2016 SHYC_RS04350 3aadbcf0baf0457a264120a4dfce2efc 172 PANTHER PTHR11019 1 172 6.1E-91 T 23-04-2016 SHYC_RS04350 3aadbcf0baf0457a264120a4dfce2efc 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 7.9E-48 T 23-04-2016 IPR006286 Peptidase C56, PfpI GO:0016798 SHYC_RS00710 da51397bd49b6bd5a1a9ed0f05522b47 247 PANTHER PTHR11751 11 73 3.9E-19 T 23-04-2016 SHYC_RS00710 da51397bd49b6bd5a1a9ed0f05522b47 247 PANTHER PTHR11751 161 179 3.9E-19 T 23-04-2016 SHYC_RS00710 da51397bd49b6bd5a1a9ed0f05522b47 247 Gene3D G3DSA:1.10.10.10 3 65 1.3E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00710 da51397bd49b6bd5a1a9ed0f05522b47 247 SUPERFAMILY SSF46785 3 74 2.0E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00710 da51397bd49b6bd5a1a9ed0f05522b47 247 Gene3D G3DSA:3.40.1410.10 66 239 3.6E-4 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SHYC_RS00710 da51397bd49b6bd5a1a9ed0f05522b47 247 SMART SM00345 11 70 1.5E-17 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS00710 da51397bd49b6bd5a1a9ed0f05522b47 247 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 69 7.0E-16 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS00710 da51397bd49b6bd5a1a9ed0f05522b47 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.5E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS00710 da51397bd49b6bd5a1a9ed0f05522b47 247 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.5E-9 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS03330 0e04b7f6aaa651d245ca7e0f9e870a43 322 PANTHER PTHR30532:SF8 3 320 3.1E-125 T 23-04-2016 SHYC_RS03330 0e04b7f6aaa651d245ca7e0f9e870a43 322 Pfam PF01497 Periplasmic binding protein 54 294 1.4E-33 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHYC_RS03330 0e04b7f6aaa651d245ca7e0f9e870a43 322 Gene3D G3DSA:3.40.50.1980 163 316 1.4E-31 T 23-04-2016 SHYC_RS03330 0e04b7f6aaa651d245ca7e0f9e870a43 322 SUPERFAMILY SSF53807 37 313 1.07E-62 T 23-04-2016 SHYC_RS03330 0e04b7f6aaa651d245ca7e0f9e870a43 322 PANTHER PTHR30532 3 320 3.1E-125 T 23-04-2016 SHYC_RS03330 0e04b7f6aaa651d245ca7e0f9e870a43 322 Gene3D G3DSA:3.40.50.1980 36 161 2.2E-37 T 23-04-2016 SHYC_RS02185 4b4fd20c55d3e47d693ceec26106f55d 469 SUPERFAMILY SSF55103 218 458 9.48E-62 T 23-04-2016 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 SHYC_RS02185 4b4fd20c55d3e47d693ceec26106f55d 469 PANTHER PTHR11748 1 469 4.0E-142 T 23-04-2016 SHYC_RS02185 4b4fd20c55d3e47d693ceec26106f55d 469 Gene3D G3DSA:3.30.43.10 3 93 3.8E-27 T 23-04-2016 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 SHYC_RS02185 4b4fd20c55d3e47d693ceec26106f55d 469 SUPERFAMILY SSF56176 5 215 2.48E-66 T 23-04-2016 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 SHYC_RS02185 4b4fd20c55d3e47d693ceec26106f55d 469 Gene3D G3DSA:3.30.465.10 98 215 5.9E-40 T 23-04-2016 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 SHYC_RS02185 4b4fd20c55d3e47d693ceec26106f55d 469 Gene3D G3DSA:1.10.45.10 416 455 3.8E-12 T 23-04-2016 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 SHYC_RS02185 4b4fd20c55d3e47d693ceec26106f55d 469 Pfam PF02913 FAD linked oxidases, C-terminal domain 214 455 7.4E-67 T 23-04-2016 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 SHYC_RS02185 4b4fd20c55d3e47d693ceec26106f55d 469 PANTHER PTHR11748:SF35 1 469 4.0E-142 T 23-04-2016 SHYC_RS02185 4b4fd20c55d3e47d693ceec26106f55d 469 Pfam PF01565 FAD binding domain 39 177 2.4E-35 T 23-04-2016 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 SHYC_RS03935 685f9405877d7df42fa3ea95017c414d 149 PANTHER PTHR33540:SF2 2 147 1.2E-37 T 23-04-2016 SHYC_RS03935 685f9405877d7df42fa3ea95017c414d 149 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 5 134 1.6E-37 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SHYC_RS03935 685f9405877d7df42fa3ea95017c414d 149 SUPERFAMILY SSF52540 16 147 1.38E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03935 685f9405877d7df42fa3ea95017c414d 149 PANTHER PTHR33540 2 147 1.2E-37 T 23-04-2016 SHYC_RS03935 685f9405877d7df42fa3ea95017c414d 149 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 5 128 2.7E-34 T 23-04-2016 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 SHYC_RS03935 685f9405877d7df42fa3ea95017c414d 149 Gene3D G3DSA:3.40.50.300 2 146 1.1E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 PANTHER PTHR30330:SF1 10 482 1.2E-274 T 23-04-2016 SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 101 116 - T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 PANTHER PTHR30330 10 482 1.2E-274 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 TIGRFAM TIGR00835 agcS: amino acid carrier protein 24 449 4.8E-154 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 PRINTS PR00175 Sodium/alanine symporter signature 418 438 1.1E-60 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 PRINTS PR00175 Sodium/alanine symporter signature 101 123 1.1E-60 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 PRINTS PR00175 Sodium/alanine symporter signature 192 210 1.1E-60 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 PRINTS PR00175 Sodium/alanine symporter signature 358 380 1.1E-60 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 PRINTS PR00175 Sodium/alanine symporter signature 220 239 1.1E-60 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 PRINTS PR00175 Sodium/alanine symporter signature 311 329 1.1E-60 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS07395 8fea96ff0e52afddec3fe40f45bbfaa5 489 Pfam PF01235 Sodium:alanine symporter family 67 461 3.8E-161 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS07825 7b18ca4d4618acd7a0f87b6436c0482a 127 SUPERFAMILY SSF54593 7 124 1.79E-15 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS07825 7b18ca4d4618acd7a0f87b6436c0482a 127 PANTHER PTHR36503 2 126 3.2E-18 T 23-04-2016 SHYC_RS07825 7b18ca4d4618acd7a0f87b6436c0482a 127 PANTHER PTHR36503:SF2 2 126 3.2E-18 T 23-04-2016 SHYC_RS07825 7b18ca4d4618acd7a0f87b6436c0482a 127 Gene3D G3DSA:3.10.180.10 6 123 4.4E-16 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PANTHER PTHR12737:SF13 318 410 6.9E-124 T 23-04-2016 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PANTHER PTHR12737:SF13 1 92 6.9E-124 T 23-04-2016 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PANTHER PTHR12737:SF13 151 291 6.9E-124 T 23-04-2016 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PANTHER PTHR12737 318 410 6.9E-124 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PANTHER PTHR12737 1 92 6.9E-124 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PANTHER PTHR12737 151 291 6.9E-124 T 23-04-2016 IPR033199 Dimethylarginine dimethylaminohydrolase/arginine deiminase KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 Gene3D G3DSA:1.10.3930.10 69 151 2.8E-21 T 23-04-2016 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 Hamap MF_00242 Arginine deiminase [arcA]. 2 410 47.14 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PRINTS PR01466 Bacterial arginine deiminase signature 3 23 1.1E-54 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PRINTS PR01466 Bacterial arginine deiminase signature 366 380 1.1E-54 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PRINTS PR01466 Bacterial arginine deiminase signature 389 407 1.1E-54 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PRINTS PR01466 Bacterial arginine deiminase signature 179 194 1.1E-54 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PRINTS PR01466 Bacterial arginine deiminase signature 346 363 1.1E-54 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PRINTS PR01466 Bacterial arginine deiminase signature 151 169 1.1E-54 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 SUPERFAMILY SSF55909 3 410 1.62E-135 T 23-04-2016 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 PIRSF PIRSF006356 1 410 1.2E-170 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 TIGRFAM TIGR01078 arcA: arginine deiminase 5 410 2.3E-164 T 23-04-2016 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981|UniPathway: UPA00254 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 Gene3D G3DSA:3.75.10.10 2 68 4.3E-134 T 23-04-2016 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 Gene3D G3DSA:3.75.10.10 152 410 4.3E-134 T 23-04-2016 SHYC_RS00850 2920567e04b0633cd7f08b791ad38efa 410 Pfam PF02274 Amidinotransferase 19 407 5.6E-100 T 23-04-2016 SHYC_RS06305 9ee0bc60560cdd74e01e86844a5f8864 421 Pfam PF16325 Peptidase family U32 C-terminal domain 339 418 5.3E-23 T 23-04-2016 IPR032525 Peptidase family U32, C-terminal KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SHYC_RS06305 9ee0bc60560cdd74e01e86844a5f8864 421 ProSitePatterns PS01276 Peptidase family U32 signature. 175 193 - T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SHYC_RS06305 9ee0bc60560cdd74e01e86844a5f8864 421 PANTHER PTHR30217:SF6 11 421 5.4E-217 T 23-04-2016 SHYC_RS06305 9ee0bc60560cdd74e01e86844a5f8864 421 Pfam PF01136 Peptidase family U32 90 321 1.7E-84 T 23-04-2016 IPR001539 Peptidase U32 GO:0006508|GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SHYC_RS06305 9ee0bc60560cdd74e01e86844a5f8864 421 PANTHER PTHR30217 11 421 5.4E-217 T 23-04-2016 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 PANTHER PTHR12128:SF34 1 285 1.9E-101 T 23-04-2016 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 23-04-2016 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 7.6E-28 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 7.6E-28 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 7.6E-28 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 7.6E-28 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 SUPERFAMILY SSF51569 2 285 6.7E-82 T 23-04-2016 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 4 285 53.086 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 284 9.0E-83 T 23-04-2016 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 PANTHER PTHR12128 1 285 1.9E-101 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 SMART SM01130 4 287 1.3E-105 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 Pfam PF00701 Dihydrodipicolinate synthetase family 5 283 1.1E-71 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 PIRSF PIRSF001365 1 291 1.7E-80 T 23-04-2016 IPR002220 DapA-like GO:0008152|GO:0016829 SHYC_RS07295 e528122b5d0803b53fb05f00ab6b7565 292 Gene3D G3DSA:3.20.20.70 4 285 4.4E-95 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS01545 77f595dbff0e646bc80989ab001ed106 205 Pfam PF09335 SNARE associated Golgi protein 30 159 6.9E-27 T 23-04-2016 IPR032816 SNARE associated Golgi protein SHYC_RS01545 77f595dbff0e646bc80989ab001ed106 205 PANTHER PTHR30353 1 198 8.3E-64 T 23-04-2016 IPR032818 DedA family SHYC_RS01545 77f595dbff0e646bc80989ab001ed106 205 PANTHER PTHR30353:SF13 1 198 8.3E-64 T 23-04-2016 SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 PANTHER PTHR12725 1 228 2.1E-74 T 23-04-2016 SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 109 190 1.5E-10 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 PANTHER PTHR12725:SF78 1 228 2.1E-74 T 23-04-2016 SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 195 4.0E-33 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 101 196 7.2E-14 T 23-04-2016 IPR006549 HAD-superfamily hydrolase,subfamily IIIA SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 SUPERFAMILY SSF56784 6 226 4.8E-40 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 Gene3D G3DSA:3.40.50.1000 5 224 6.3E-44 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 108 121 1.4E-16 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 139 155 1.4E-16 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 157 177 1.4E-16 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 6 17 1.4E-16 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS10375 7f1774d0567e930948cc8f7c5b4c1531 235 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 196 6.8E-11 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS11405 b428f369d7775934551e89aa3e85680d 265 SMART SM00020 27 260 0.0041 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 SHYC_RS11405 b428f369d7775934551e89aa3e85680d 265 Pfam PF00089 Trypsin 32 260 4.6E-13 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 SHYC_RS11405 b428f369d7775934551e89aa3e85680d 265 Gene3D G3DSA:2.40.10.10 149 260 2.8E-6 T 23-04-2016 SHYC_RS11405 b428f369d7775934551e89aa3e85680d 265 SUPERFAMILY SSF50494 39 262 5.83E-19 T 23-04-2016 IPR009003 Peptidase S1, PA clan SHYC_RS11405 b428f369d7775934551e89aa3e85680d 265 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 62 67 - T 23-04-2016 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 SHYC_RS11405 b428f369d7775934551e89aa3e85680d 265 Gene3D G3DSA:2.40.10.10 44 131 8.2E-12 T 23-04-2016 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 PANTHER PTHR11019 22 274 8.6E-28 T 23-04-2016 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 Gene3D G3DSA:1.10.10.60 171 223 6.7E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 SUPERFAMILY SSF46689 173 220 3.83E-9 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 Pfam PF12833 Helix-turn-helix domain 193 271 1.6E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 SUPERFAMILY SSF51215 9 154 1.31E-21 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 SUPERFAMILY SSF46689 223 271 5.82E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 Pfam PF02311 AraC-like ligand binding domain 16 151 2.3E-23 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 5.1E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 5.1E-6 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 Gene3D G3DSA:1.10.10.60 224 271 1.6E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 Gene3D G3DSA:2.60.120.280 4 158 2.9E-24 T 23-04-2016 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 SMART SM00342 187 270 3.3E-30 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHYC_RS02620 833f00631fccb38a104a4ffd3007359f 274 PANTHER PTHR11019:SF103 22 274 8.6E-28 T 23-04-2016 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 Gene3D G3DSA:1.20.1250.20 78 264 1.8E-33 T 23-04-2016 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 Gene3D G3DSA:1.20.1250.20 548 571 5.6E-20 T 23-04-2016 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 Gene3D G3DSA:1.20.1250.20 345 496 5.6E-20 T 23-04-2016 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 Pfam PF07690 Major Facilitator Superfamily 95 485 1.0E-55 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 SUPERFAMILY SSF103473 547 572 3.79E-66 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 SUPERFAMILY SSF103473 79 271 3.79E-66 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 SUPERFAMILY SSF103473 324 495 3.79E-66 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 PANTHER PTHR23501:SF82 36 571 7.7E-276 T 23-04-2016 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 PANTHER PTHR23501 36 571 7.7E-276 T 23-04-2016 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 PRINTS PR01036 Tetracycline resistance protein TetB signature 93 117 3.8E-9 T 23-04-2016 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 PRINTS PR01036 Tetracycline resistance protein TetB signature 378 402 3.8E-9 T 23-04-2016 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 PRINTS PR01036 Tetracycline resistance protein TetB signature 214 238 3.8E-9 T 23-04-2016 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 PRINTS PR01036 Tetracycline resistance protein TetB signature 153 175 3.8E-9 T 23-04-2016 SHYC_RS10460 bc503285dd2b204598d109650de508b4 580 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 91 570 2.0E-133 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SHYC_RS01590 3ea419e576a50352961aa61b3d7f5c8f 186 SUPERFAMILY SSF46785 10 154 4.24E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01590 3ea419e576a50352961aa61b3d7f5c8f 186 PIRSF PIRSF006707 2 186 1.6E-46 T 23-04-2016 IPR026282 DNA-binding protein, MJ1563 type SHYC_RS01590 3ea419e576a50352961aa61b3d7f5c8f 186 PANTHER PTHR38465 1 186 4.6E-43 T 23-04-2016 SHYC_RS01590 3ea419e576a50352961aa61b3d7f5c8f 186 Gene3D G3DSA:1.10.10.10 10 90 9.3E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS09920 dbf2dd0dc2a1164de7ecf620dacfa0cd 143 SUPERFAMILY SSF55620 11 135 2.22E-33 T 23-04-2016 SHYC_RS09920 dbf2dd0dc2a1164de7ecf620dacfa0cd 143 Gene3D G3DSA:3.30.479.10 12 136 1.6E-38 T 23-04-2016 SHYC_RS09920 dbf2dd0dc2a1164de7ecf620dacfa0cd 143 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 16 105 1.1E-26 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SHYC_RS09920 dbf2dd0dc2a1164de7ecf620dacfa0cd 143 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 17 134 2.5E-28 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SHYC_RS09920 dbf2dd0dc2a1164de7ecf620dacfa0cd 143 PIRSF PIRSF006113 10 136 8.8E-21 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SHYC_RS09920 dbf2dd0dc2a1164de7ecf620dacfa0cd 143 PANTHER PTHR12589 5 141 8.9E-43 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SHYC_RS09920 dbf2dd0dc2a1164de7ecf620dacfa0cd 143 PANTHER PTHR12589:SF1 5 141 8.9E-43 T 23-04-2016 SHYC_RS02760 b920e597347684225b557278d48234f0 276 PANTHER PTHR30520:SF5 2 270 1.7E-106 T 23-04-2016 SHYC_RS02760 b920e597347684225b557278d48234f0 276 Pfam PF01226 Formate/nitrite transporter 35 263 6.0E-47 T 23-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SHYC_RS02760 b920e597347684225b557278d48234f0 276 Gene3D G3DSA:1.20.1080.10 37 266 1.1E-49 T 23-04-2016 IPR023271 Aquaporin-like SHYC_RS02760 b920e597347684225b557278d48234f0 276 PANTHER PTHR30520 2 270 1.7E-106 T 23-04-2016 SHYC_RS00930 2e3f9c0336cb964bfa8727bda38cd41e 553 Pfam PF00890 FAD binding domain 7 533 5.7E-85 T 23-04-2016 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain SHYC_RS00930 2e3f9c0336cb964bfa8727bda38cd41e 553 PANTHER PTHR11632:SF38 7 397 3.3E-206 T 23-04-2016 SHYC_RS00930 2e3f9c0336cb964bfa8727bda38cd41e 553 PANTHER PTHR11632:SF38 470 551 3.3E-206 T 23-04-2016 SHYC_RS00930 2e3f9c0336cb964bfa8727bda38cd41e 553 PIRSF PIRSF036654 1 551 5.2E-257 T 23-04-2016 IPR014614 Uncharacterised conserved protein UCP036654 GO:0016627|GO:0055114 KEGG: 00071+1.3.99.-|KEGG: 00280+1.3.99.-|KEGG: 00281+1.3.99.-|KEGG: 00362+1.3.99.-|KEGG: 00626+1.3.99.-|KEGG: 00930+1.3.99.-|UniPathway: UPA00062 SHYC_RS00930 2e3f9c0336cb964bfa8727bda38cd41e 553 PANTHER PTHR11632 7 397 3.3E-206 T 23-04-2016 SHYC_RS00930 2e3f9c0336cb964bfa8727bda38cd41e 553 PANTHER PTHR11632 470 551 3.3E-206 T 23-04-2016 SHYC_RS00930 2e3f9c0336cb964bfa8727bda38cd41e 553 SUPERFAMILY SSF51905 488 549 3.4E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00930 2e3f9c0336cb964bfa8727bda38cd41e 553 SUPERFAMILY SSF51905 3 279 3.4E-28 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00930 2e3f9c0336cb964bfa8727bda38cd41e 553 Gene3D G3DSA:3.50.50.60 485 549 8.4E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00930 2e3f9c0336cb964bfa8727bda38cd41e 553 Gene3D G3DSA:3.50.50.60 7 274 8.4E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS04295 9c8ebe1c7315211ad87bfe9583ccdee0 235 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 119 232 3.3E-32 T 23-04-2016 IPR024425 Cell wall-active antibiotics response 4TMS YvqF SHYC_RS04295 9c8ebe1c7315211ad87bfe9583ccdee0 235 PIRSF PIRSF031509 5 235 2.8E-55 T 23-04-2016 IPR016975 Cell wall-active antibiotic response protein GO:0016021 SHYC_RS05240 419488949e9cbb7f4d421acbdcae79e7 214 Gene3D G3DSA:3.40.50.300 71 200 1.5E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05240 419488949e9cbb7f4d421acbdcae79e7 214 SUPERFAMILY SSF52540 17 203 4.82E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05240 419488949e9cbb7f4d421acbdcae79e7 214 Pfam PF04275 Phosphomevalonate kinase 20 134 6.5E-5 T 23-04-2016 IPR005919 Higher eukaryotic phosphomevalonate kinase GO:0004631|GO:0005737|GO:0006695 KEGG: 00900+2.7.4.2|MetaCyc: PWY-7391|MetaCyc: PWY-922|UniPathway: UPA00057 SHYC_RS05240 419488949e9cbb7f4d421acbdcae79e7 214 Pfam PF13238 AAA domain 18 164 3.5E-8 T 23-04-2016 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 44 55 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 Hamap MF_02004 Valine--tRNA ligase [valS]. 3 875 15.964 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 16 559 2.2E-213 T 23-04-2016 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 Pfam PF08264 Anticodon-binding domain of tRNA 604 747 6.1E-40 T 23-04-2016 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 Gene3D G3DSA:1.10.730.10 560 741 4.0E-61 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 TIGRFAM TIGR00422 valS: valine--tRNA ligase 3 856 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 810 875 7.6E-23 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 Gene3D G3DSA:3.40.50.620 341 558 2.6E-140 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 Gene3D G3DSA:3.40.50.620 6 194 2.6E-140 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 PRINTS PR00986 Valyl-tRNA synthetase signature 440 461 1.545649E-38 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 PRINTS PR00986 Valyl-tRNA synthetase signature 472 490 1.545649E-38 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 PRINTS PR00986 Valyl-tRNA synthetase signature 346 359 1.545649E-38 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 PRINTS PR00986 Valyl-tRNA synthetase signature 37 48 1.545649E-38 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 PRINTS PR00986 Valyl-tRNA synthetase signature 231 248 1.545649E-38 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 PANTHER PTHR11946:SF5 1 786 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 PANTHER PTHR11946:SF5 806 873 0.0 T 23-04-2016 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 SUPERFAMILY SSF46589 810 874 4.08E-17 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 PANTHER PTHR11946 1 786 0.0 T 23-04-2016 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 PANTHER PTHR11946 806 873 0.0 T 23-04-2016 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 SUPERFAMILY SSF47323 571 825 2.06E-70 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 SUPERFAMILY SSF52374 341 570 5.18E-141 T 23-04-2016 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 SUPERFAMILY SSF52374 2 193 5.18E-141 T 23-04-2016 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 Gene3D G3DSA:1.10.287.380 803 869 2.5E-7 T 23-04-2016 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 SUPERFAMILY SSF50677 191 342 1.44E-61 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SHYC_RS06100 42b063db510772b0da8e2b8c0a051189 876 Gene3D G3DSA:3.90.740.10 195 337 5.1E-48 T 23-04-2016 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 Reactome: REACT_71 SHYC_RS02675 4e176a79f2d8b104e85e4a70ac798422 226 PANTHER PTHR11934 5 226 3.6E-85 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SHYC_RS02675 4e176a79f2d8b104e85e4a70ac798422 226 SUPERFAMILY SSF75445 131 207 4.45E-18 T 23-04-2016 SHYC_RS02675 4e176a79f2d8b104e85e4a70ac798422 226 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 51 220 3.4E-58 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SHYC_RS02675 4e176a79f2d8b104e85e4a70ac798422 226 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 7 222 2.9E-75 T 23-04-2016 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SHYC_RS02675 4e176a79f2d8b104e85e4a70ac798422 226 Gene3D G3DSA:3.30.70.260 139 204 1.0E-17 T 23-04-2016 SHYC_RS02675 4e176a79f2d8b104e85e4a70ac798422 226 SUPERFAMILY SSF100950 6 148 9.42E-40 T 23-04-2016 SHYC_RS02675 4e176a79f2d8b104e85e4a70ac798422 226 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 224 29.678 T 23-04-2016 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SHYC_RS02675 4e176a79f2d8b104e85e4a70ac798422 226 Gene3D G3DSA:3.40.50.1360 5 138 5.2E-51 T 23-04-2016 SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 304 28.258 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 SUPERFAMILY SSF52540 8 116 8.31E-20 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 Gene3D G3DSA:3.40.50.300 4 178 4.0E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 PANTHER PTHR11088 2 298 7.7E-113 T 23-04-2016 SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 Gene3D G3DSA:1.10.287.890 206 286 1.1E-28 T 23-04-2016 SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 PANTHER PTHR11088:SF25 2 298 7.7E-113 T 23-04-2016 SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 SUPERFAMILY SSF52540 156 216 1.38E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 SUPERFAMILY SSF52540 5 79 1.38E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 SUPERFAMILY SSF52540 254 313 1.38E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 8 295 1.3E-93 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SHYC_RS07640 9719864a44532481cb1ac3fe7947b16f 318 Pfam PF01715 IPP transferase 41 289 1.6E-78 T 23-04-2016 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781 SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 SUPERFAMILY SSF103473 252 475 8.5E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 SUPERFAMILY SSF103473 11 199 8.5E-61 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 422 1.8E-88 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 Pfam PF07690 Major Facilitator Superfamily 23 413 4.2E-49 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 PANTHER PTHR23501:SF82 10 473 2.1E-190 T 23-04-2016 SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 PANTHER PTHR23501 10 473 2.1E-190 T 23-04-2016 SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 Gene3D G3DSA:1.20.1250.20 16 195 3.5E-29 T 23-04-2016 SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 Gene3D G3DSA:1.20.1250.20 267 473 1.5E-19 T 23-04-2016 SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 1.9E-8 T 23-04-2016 SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 1.9E-8 T 23-04-2016 SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 346 366 1.9E-8 T 23-04-2016 SHYC_RS01410 60d9982e19793801fde66a2d39ad4c14 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 1.9E-8 T 23-04-2016 SHYC_RS08940 7f15fb7d7ef3238b18b4ab019745899b 136 Pfam PF08863 YolD-like protein 42 136 7.2E-25 T 23-04-2016 IPR014962 YolD-like protein SHYC_RS08940 7f15fb7d7ef3238b18b4ab019745899b 136 PANTHER PTHR40051:SF1 22 135 3.6E-18 T 23-04-2016 SHYC_RS08940 7f15fb7d7ef3238b18b4ab019745899b 136 PANTHER PTHR40051 22 135 3.6E-18 T 23-04-2016 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 Gene3D G3DSA:3.30.540.10 3 151 6.3E-45 T 23-04-2016 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 36 56 9.3E-34 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 129 152 9.3E-34 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 58 74 9.3E-34 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 80 96 9.3E-34 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 173 194 9.3E-34 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 204 228 9.3E-34 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 PANTHER PTHR20854 2 270 1.0E-80 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 23-04-2016 IPR020583 Inositol monophosphatase, metal-binding site SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 207 221 - T 23-04-2016 IPR020550 Inositol monophosphatase, conserved site GO:0046854 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 PANTHER PTHR20854:SF4 2 270 1.0E-80 T 23-04-2016 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 Gene3D G3DSA:3.40.190.80 152 252 8.1E-24 T 23-04-2016 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 SUPERFAMILY SSF56655 2 252 3.4E-72 T 23-04-2016 SHYC_RS08550 7cbdd07a78ef811d7941354600ea3ce1 270 Pfam PF00459 Inositol monophosphatase family 3 251 1.9E-56 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS08895 f5b5f63d51aec589e26e478b8af03a44 280 PANTHER PTHR10992 2 263 2.7E-56 T 23-04-2016 SHYC_RS08895 f5b5f63d51aec589e26e478b8af03a44 280 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 14 261 5.2E-84 T 23-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS08895 f5b5f63d51aec589e26e478b8af03a44 280 PANTHER PTHR10992:SF880 2 263 2.7E-56 T 23-04-2016 SHYC_RS08895 f5b5f63d51aec589e26e478b8af03a44 280 Pfam PF12697 Alpha/beta hydrolase family 17 249 1.3E-15 T 23-04-2016 IPR000073 Alpha/beta hydrolase fold-1 SHYC_RS08895 f5b5f63d51aec589e26e478b8af03a44 280 Gene3D G3DSA:3.40.50.1820 3 262 1.2E-47 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS08895 f5b5f63d51aec589e26e478b8af03a44 280 SUPERFAMILY SSF53474 2 263 1.03E-41 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS08895 f5b5f63d51aec589e26e478b8af03a44 280 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 10 262 34.064 T 23-04-2016 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS08610 9201323fdc9bc239e01b9806f3241905 325 Pfam PF02780 Transketolase, C-terminal domain 194 315 9.0E-41 T 23-04-2016 IPR033248 Transketolase, C-terminal domain SHYC_RS08610 9201323fdc9bc239e01b9806f3241905 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 5.5E-37 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHYC_RS08610 9201323fdc9bc239e01b9806f3241905 325 PANTHER PTHR11624 3 325 3.1E-207 T 23-04-2016 IPR033247 Transketolase family SHYC_RS08610 9201323fdc9bc239e01b9806f3241905 325 Gene3D G3DSA:3.40.50.970 1 196 3.3E-73 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS08610 9201323fdc9bc239e01b9806f3241905 325 SUPERFAMILY SSF52922 188 324 4.19E-42 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHYC_RS08610 9201323fdc9bc239e01b9806f3241905 325 SMART SM00861 4 179 1.8E-53 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHYC_RS08610 9201323fdc9bc239e01b9806f3241905 325 Gene3D G3DSA:3.40.50.920 197 321 3.5E-52 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHYC_RS08610 9201323fdc9bc239e01b9806f3241905 325 SUPERFAMILY SSF52518 2 204 4.71E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS08610 9201323fdc9bc239e01b9806f3241905 325 PANTHER PTHR11624:SF79 3 325 3.1E-207 T 23-04-2016 SHYC_RS08420 79da59928f19819a2f13dfd82316f6f3 88 SUPERFAMILY SSF102829 7 85 4.84E-19 T 23-04-2016 IPR007838 Cell division protein ZapA-like SHYC_RS08420 79da59928f19819a2f13dfd82316f6f3 88 Pfam PF05164 Cell division protein ZapA 8 85 6.1E-16 T 23-04-2016 IPR007838 Cell division protein ZapA-like SHYC_RS08420 79da59928f19819a2f13dfd82316f6f3 88 PANTHER PTHR34981:SF1 4 86 7.9E-25 T 23-04-2016 SHYC_RS08420 79da59928f19819a2f13dfd82316f6f3 88 PANTHER PTHR34981 4 86 7.9E-25 T 23-04-2016 SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 SMART SM00382 109 259 1.2E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 SUPERFAMILY SSF52540 60 396 6.98E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 SMART SM00994 10 49 8.9E-22 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 409 51.566 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 1.0E-16 T 23-04-2016 IPR019489 Clp ATPase, C-terminal SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 Pfam PF06689 ClpX C4-type zinc finger 11 48 1.0E-18 T 23-04-2016 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 Gene3D G3DSA:1.10.8.60 311 407 4.8E-35 T 23-04-2016 SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 Gene3D G3DSA:3.40.50.300 62 251 4.8E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 Gene3D G3DSA:3.40.50.300 288 305 4.8E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 PANTHER PTHR11262:SF4 5 403 7.3E-231 T 23-04-2016 SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 SMART SM01086 311 405 2.4E-30 T 23-04-2016 IPR019489 Clp ATPase, C-terminal SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 SUPERFAMILY SSF57716 11 46 5.7E-11 T 23-04-2016 SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 PANTHER PTHR11262 5 403 7.3E-231 T 23-04-2016 SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 3 405 1.4E-199 T 23-04-2016 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 SHYC_RS06050 f8f8989c39fe7d92ee3172961b3f9f2f 420 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 1.7E-47 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHYC_RS05580 712f8dbbe9fc4eef7d62501647ec9688 288 SMART SM00047 119 271 6.1E-38 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHYC_RS05580 712f8dbbe9fc4eef7d62501647ec9688 288 PANTHER PTHR33308:SF1 43 276 5.6E-72 T 23-04-2016 SHYC_RS05580 712f8dbbe9fc4eef7d62501647ec9688 288 PANTHER PTHR33308 43 276 5.6E-72 T 23-04-2016 SHYC_RS05580 712f8dbbe9fc4eef7d62501647ec9688 288 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 133 260 1.7E-11 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHYC_RS00820 d575e60b50a9f94e8af5197234ef2168 369 SUPERFAMILY SSF51905 168 312 7.89E-12 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00820 d575e60b50a9f94e8af5197234ef2168 369 Gene3D G3DSA:3.50.50.60 2 182 3.8E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00820 d575e60b50a9f94e8af5197234ef2168 369 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.6E-6 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS00820 d575e60b50a9f94e8af5197234ef2168 369 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 164 188 1.6E-6 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS00820 d575e60b50a9f94e8af5197234ef2168 369 PANTHER PTHR23023 1 360 2.3E-37 T 23-04-2016 SHYC_RS00820 d575e60b50a9f94e8af5197234ef2168 369 Gene3D G3DSA:3.50.50.60 183 313 1.4E-9 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00820 d575e60b50a9f94e8af5197234ef2168 369 PANTHER PTHR23023:SF4 1 360 2.3E-37 T 23-04-2016 SHYC_RS00820 d575e60b50a9f94e8af5197234ef2168 369 SUPERFAMILY SSF51905 1 200 2.59E-26 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00820 d575e60b50a9f94e8af5197234ef2168 369 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 8 307 2.0E-92 T 23-04-2016 SHYC_RS08905 ea708eaecbe1cef4a2501c2d56e602f7 450 SUPERFAMILY SSF56322 24 448 1.24E-88 T 23-04-2016 IPR005801 ADC synthase GO:0009058 SHYC_RS08905 ea708eaecbe1cef4a2501c2d56e602f7 450 PANTHER PTHR11236 77 450 9.9E-110 T 23-04-2016 SHYC_RS08905 ea708eaecbe1cef4a2501c2d56e602f7 450 Pfam PF00425 chorismate binding enzyme 191 439 2.1E-62 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SHYC_RS08905 ea708eaecbe1cef4a2501c2d56e602f7 450 Gene3D G3DSA:3.60.120.10 21 448 1.8E-79 T 23-04-2016 IPR005801 ADC synthase GO:0009058 SHYC_RS08905 ea708eaecbe1cef4a2501c2d56e602f7 450 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 103 447 4.1E-105 T 23-04-2016 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 SHYC_RS08905 ea708eaecbe1cef4a2501c2d56e602f7 450 PANTHER PTHR11236:SF3 77 450 9.9E-110 T 23-04-2016 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 SUPERFAMILY SSF53067 7 127 3.24E-32 T 23-04-2016 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 Gene3D G3DSA:3.30.420.40 6 162 4.3E-49 T 23-04-2016 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 23-04-2016 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 310 4.9E-110 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 317 1.5E-133 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 PANTHER PTHR11735 1 336 2.5E-159 T 23-04-2016 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 PANTHER PTHR11735:SF6 1 336 2.5E-159 T 23-04-2016 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 Pfam PF00814 Glycoprotease family 28 310 6.0E-104 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 SUPERFAMILY SSF53067 105 316 3.73E-38 T 23-04-2016 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 335 62.65 T 23-04-2016 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 1.0E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 1.0E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 1.0E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 1.0E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 267 276 1.0E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03950 be5c2053a3044a83a6599c01cc02a6d1 339 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 1.0E-50 T 23-04-2016 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS06865 ec833b44b8f875cb50d31c5d2f0ca699 180 PANTHER PTHR11839 1 177 2.2E-59 T 23-04-2016 SHYC_RS06865 ec833b44b8f875cb50d31c5d2f0ca699 180 ProSitePatterns PS00893 Nudix box signature. 76 97 - T 23-04-2016 IPR020084 NUDIX hydrolase, conserved site GO:0016787 SHYC_RS06865 ec833b44b8f875cb50d31c5d2f0ca699 180 PANTHER PTHR11839:SF9 1 177 2.2E-59 T 23-04-2016 SHYC_RS06865 ec833b44b8f875cb50d31c5d2f0ca699 180 SUPERFAMILY SSF55811 6 176 7.45E-47 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHYC_RS06865 ec833b44b8f875cb50d31c5d2f0ca699 180 Pfam PF00293 NUDIX domain 41 154 2.1E-19 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SHYC_RS06865 ec833b44b8f875cb50d31c5d2f0ca699 180 Gene3D G3DSA:3.90.79.10 4 177 6.7E-55 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 SUPERFAMILY SSF103473 3 381 2.09E-66 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 PANTHER PTHR23504 3 380 3.9E-176 T 23-04-2016 SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 Gene3D G3DSA:1.20.1250.20 3 181 2.2E-38 T 23-04-2016 SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 Gene3D G3DSA:1.20.1250.20 204 379 1.6E-22 T 23-04-2016 SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 Pfam PF07690 Major Facilitator Superfamily 9 335 1.4E-48 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 PANTHER PTHR23504:SF20 3 380 3.9E-176 T 23-04-2016 SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 PRINTS PR01035 Tetracycline resistance protein signature 14 30 8.3E-23 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 PRINTS PR01035 Tetracycline resistance protein signature 328 351 8.3E-23 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 PRINTS PR01035 Tetracycline resistance protein signature 240 260 8.3E-23 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 PRINTS PR01035 Tetracycline resistance protein signature 157 177 8.3E-23 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHYC_RS09975 89fdc52dc445ef7d8e605a4025c89483 386 PRINTS PR01035 Tetracycline resistance protein signature 129 151 8.3E-23 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHYC_RS11295 7abf9422bba3bcdac9b79017a787501b 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 119 3.3E-56 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SHYC_RS11295 7abf9422bba3bcdac9b79017a787501b 127 PANTHER PTHR21012:SF0 2 120 2.8E-65 T 23-04-2016 SHYC_RS11295 7abf9422bba3bcdac9b79017a787501b 127 SUPERFAMILY SSF50692 1 117 9.94E-50 T 23-04-2016 IPR009010 Aspartate decarboxylase-like domain SHYC_RS11295 7abf9422bba3bcdac9b79017a787501b 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 70.592 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SHYC_RS11295 7abf9422bba3bcdac9b79017a787501b 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 95 2.0E-43 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SHYC_RS11295 7abf9422bba3bcdac9b79017a787501b 127 Pfam PF02261 Aspartate decarboxylase 1 114 3.0E-52 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SHYC_RS11295 7abf9422bba3bcdac9b79017a787501b 127 PIRSF PIRSF006246 1 127 1.9E-54 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SHYC_RS11295 7abf9422bba3bcdac9b79017a787501b 127 PANTHER PTHR21012 2 120 2.8E-65 T 23-04-2016 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155|UniPathway: UPA00028 SHYC_RS11295 7abf9422bba3bcdac9b79017a787501b 127 Gene3D G3DSA:2.40.40.20 1 120 6.1E-56 T 23-04-2016 SHYC_RS03335 e8d5194f54fee17d1a37701edd97e81f 341 Pfam PF01032 FecCD transport family 29 336 1.5E-93 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS03335 e8d5194f54fee17d1a37701edd97e81f 341 PANTHER PTHR30472 16 341 2.4E-173 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS03335 e8d5194f54fee17d1a37701edd97e81f 341 SUPERFAMILY SSF81345 12 336 7.45E-83 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS03335 e8d5194f54fee17d1a37701edd97e81f 341 Gene3D G3DSA:1.10.3470.10 16 339 2.5E-98 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS03335 e8d5194f54fee17d1a37701edd97e81f 341 PANTHER PTHR30472:SF20 16 341 2.4E-173 T 23-04-2016 SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 Gene3D G3DSA:3.30.1330.90 322 447 6.2E-35 T 23-04-2016 IPR029009 Allosteric substrate binding domain SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 SUPERFAMILY SSF55021 444 524 1.91E-17 T 23-04-2016 SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 PANTHER PTHR10996:SF20 2 358 1.9E-161 T 23-04-2016 SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 145 172 - T 23-04-2016 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 314 5.7E-35 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 282 2.2E-62 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 222 238 - T 23-04-2016 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 Gene3D G3DSA:3.40.50.720 3 109 5.2E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 SUPERFAMILY SSF51735 102 283 3.79E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 Gene3D G3DSA:3.30.70.260 448 524 5.0E-19 T 23-04-2016 SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 SUPERFAMILY SSF143548 322 450 2.62E-28 T 23-04-2016 IPR029009 Allosteric substrate binding domain SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 Gene3D G3DSA:3.40.50.720 110 284 1.6E-69 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 Pfam PF01842 ACT domain 455 511 1.0E-8 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 4 528 1.5E-205 T 23-04-2016 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|UniPathway: UPA00135 SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 PANTHER PTHR10996 2 358 1.9E-161 T 23-04-2016 SHYC_RS05810 d12b7162f0dff9500b65e6a80d39d699 530 SUPERFAMILY SSF52283 1 136 3.59E-36 T 23-04-2016 SHYC_RS08585 adf33dee7273de4c9ca193555bba2125 366 Gene3D G3DSA:3.40.50.300 3 236 1.8E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08585 adf33dee7273de4c9ca193555bba2125 366 SUPERFAMILY SSF52540 4 244 5.86E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08585 adf33dee7273de4c9ca193555bba2125 366 Pfam PF00005 ABC transporter 21 161 5.3E-35 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS08585 adf33dee7273de4c9ca193555bba2125 366 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 35 320 1.1E-108 T 23-04-2016 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 SHYC_RS08585 adf33dee7273de4c9ca193555bba2125 366 PANTHER PTHR24220 6 366 5.1E-171 T 23-04-2016 SHYC_RS08585 adf33dee7273de4c9ca193555bba2125 366 PANTHER PTHR24220:SF150 6 366 5.1E-171 T 23-04-2016 SHYC_RS08585 adf33dee7273de4c9ca193555bba2125 366 SUPERFAMILY SSF50331 237 342 8.5E-13 T 23-04-2016 IPR008995 Molybdate/tungstate binding, C-terminal SHYC_RS08585 adf33dee7273de4c9ca193555bba2125 366 SMART SM00382 29 212 5.3E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS08585 adf33dee7273de4c9ca193555bba2125 366 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS08585 adf33dee7273de4c9ca193555bba2125 366 Pfam PF08402 TOBE domain 273 341 1.3E-7 T 23-04-2016 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 SHYC_RS06350 cf45c3f9963e766402c6175c7ff1da11 230 Pfam PF01048 Phosphorylase superfamily 2 225 4.1E-51 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHYC_RS06350 cf45c3f9963e766402c6175c7ff1da11 230 PANTHER PTHR21234 2 229 2.4E-60 T 23-04-2016 IPR018017 Nucleoside phosphorylase SHYC_RS06350 cf45c3f9963e766402c6175c7ff1da11 230 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 2.4E-84 T 23-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 SHYC_RS06350 cf45c3f9963e766402c6175c7ff1da11 230 SUPERFAMILY SSF53167 2 228 1.18E-71 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHYC_RS06350 cf45c3f9963e766402c6175c7ff1da11 230 PANTHER PTHR21234:SF16 2 229 2.4E-60 T 23-04-2016 SHYC_RS06350 cf45c3f9963e766402c6175c7ff1da11 230 Gene3D G3DSA:3.40.50.1580 1 229 3.7E-80 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHYC_RS06350 cf45c3f9963e766402c6175c7ff1da11 230 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 1 228 43.829 T 23-04-2016 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154|UniPathway: UPA00904 SHYC_RS04275 cd3fde9d8bf2619b5071396d78728c33 243 PANTHER PTHR21343 2 243 2.5E-105 T 23-04-2016 SHYC_RS04275 cd3fde9d8bf2619b5071396d78728c33 243 PANTHER PTHR21343:SF9 2 243 2.5E-105 T 23-04-2016 SHYC_RS04275 cd3fde9d8bf2619b5071396d78728c33 243 Gene3D G3DSA:3.40.50.880 20 196 4.4E-13 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS04275 cd3fde9d8bf2619b5071396d78728c33 243 SUPERFAMILY SSF52317 16 192 1.58E-21 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS04275 cd3fde9d8bf2619b5071396d78728c33 243 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 5 196 5.8E-43 T 23-04-2016 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 UniPathway: UPA00148 SHYC_RS02160 36f7d2ac220b4ee39c12a95e11306ecf 404 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 382 1.6E-43 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS02160 36f7d2ac220b4ee39c12a95e11306ecf 404 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 12 394 4.2E-194 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SHYC_RS02160 36f7d2ac220b4ee39c12a95e11306ecf 404 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 7 395 50.534 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SHYC_RS02160 36f7d2ac220b4ee39c12a95e11306ecf 404 PANTHER PTHR10314:SF3 12 400 3.0E-222 T 23-04-2016 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SHYC_RS02160 36f7d2ac220b4ee39c12a95e11306ecf 404 SUPERFAMILY SSF53686 9 394 3.14E-140 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS02160 36f7d2ac220b4ee39c12a95e11306ecf 404 Gene3D G3DSA:3.40.50.1100 103 182 5.2E-18 T 23-04-2016 SHYC_RS02160 36f7d2ac220b4ee39c12a95e11306ecf 404 PIRSF PIRSF001413 2 401 4.2E-161 T 23-04-2016 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SHYC_RS02160 36f7d2ac220b4ee39c12a95e11306ecf 404 PANTHER PTHR10314 12 400 3.0E-222 T 23-04-2016 SHYC_RS02160 36f7d2ac220b4ee39c12a95e11306ecf 404 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 86 100 - T 23-04-2016 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SHYC_RS02160 36f7d2ac220b4ee39c12a95e11306ecf 404 Gene3D G3DSA:3.40.50.1100 183 398 1.5E-90 T 23-04-2016 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 SUPERFAMILY SSF47789 247 312 7.06E-23 T 23-04-2016 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 314 2.0E-23 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 SUPERFAMILY SSF56553 50 171 7.72E-39 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 35.836 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 304 2.7E-28 T 23-04-2016 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 SUPERFAMILY SSF55257 172 226 3.92E-32 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 SUPERFAMILY SSF55257 8 50 3.92E-32 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 312 4.1E-119 T 23-04-2016 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 PANTHER PTHR32108:SF0 1 313 2.6E-138 T 23-04-2016 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 1.3E-24 T 23-04-2016 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 Gene3D G3DSA:1.10.150.20 246 313 2.2E-31 T 23-04-2016 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 SMART SM00662 20 227 5.2E-98 T 23-04-2016 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 PANTHER PTHR32108 1 313 2.6E-138 T 23-04-2016 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 Gene3D G3DSA:3.30.1360.10 116 224 8.9E-30 T 23-04-2016 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 Gene3D G3DSA:3.30.1360.10 4 110 3.1E-12 T 23-04-2016 SHYC_RS03190 040ecb1dd116263f06215b847afb2775 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 152 1.9E-22 T 23-04-2016 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: REACT_1788 SHYC_RS09720 ca2122fbc1ab20e363c7f3c406bf5e44 189 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 3 102 4.2E-31 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SHYC_RS09720 ca2122fbc1ab20e363c7f3c406bf5e44 189 SUPERFAMILY SSF69754 3 106 3.14E-31 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SHYC_RS09720 ca2122fbc1ab20e363c7f3c406bf5e44 189 PANTHER PTHR33231 1 186 6.1E-61 T 23-04-2016 SHYC_RS09720 ca2122fbc1ab20e363c7f3c406bf5e44 189 Gene3D G3DSA:3.30.160.100 3 95 4.0E-31 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SHYC_RS09720 ca2122fbc1ab20e363c7f3c406bf5e44 189 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 127 182 5.3E-27 T 23-04-2016 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal SHYC_RS09720 ca2122fbc1ab20e363c7f3c406bf5e44 189 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 5 96 2.7E-27 T 23-04-2016 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 SHYC_RS10785 4fa37ec39d72856fcd8c883800c032b1 295 ProSitePatterns PS01235 PdxS/SNZ family signature. 206 224 - T 23-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SHYC_RS10785 4fa37ec39d72856fcd8c883800c032b1 295 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 5 295 52.097 T 23-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SHYC_RS10785 4fa37ec39d72856fcd8c883800c032b1 295 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 10 295 1.4E-151 T 23-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SHYC_RS10785 4fa37ec39d72856fcd8c883800c032b1 295 PIRSF PIRSF029271 1 295 8.8E-150 T 23-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SHYC_RS10785 4fa37ec39d72856fcd8c883800c032b1 295 Gene3D G3DSA:3.20.20.70 193 279 1.4E-50 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS10785 4fa37ec39d72856fcd8c883800c032b1 295 Gene3D G3DSA:3.20.20.70 25 161 1.4E-50 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS10785 4fa37ec39d72856fcd8c883800c032b1 295 PANTHER PTHR31829 4 295 5.1E-208 T 23-04-2016 SHYC_RS10785 4fa37ec39d72856fcd8c883800c032b1 295 Pfam PF01680 SOR/SNZ family 9 213 1.1E-104 T 23-04-2016 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466|UniPathway: UPA00245 SHYC_RS10785 4fa37ec39d72856fcd8c883800c032b1 295 SUPERFAMILY SSF51366 19 268 4.05E-67 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHYC_RS01350 2303f6e7ec6af869d7e2405cd57b56e2 252 Pfam PF04507 Protein of unknown function, DUF576 1 240 2.3E-65 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS01350 2303f6e7ec6af869d7e2405cd57b56e2 252 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 234 6.6E-60 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS11120 cc749bbd38fca38af7bef0817ba5237a 478 SUPERFAMILY SSF55604 8 81 3.79E-19 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS11120 cc749bbd38fca38af7bef0817ba5237a 478 Pfam PF00367 phosphotransferase system, EIIB 9 42 3.2E-15 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SHYC_RS11120 cc749bbd38fca38af7bef0817ba5237a 478 PANTHER PTHR30175:SF4 7 470 7.9E-197 T 23-04-2016 SHYC_RS11120 cc749bbd38fca38af7bef0817ba5237a 478 Pfam PF02378 Phosphotransferase system, EIIC 111 408 1.5E-45 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS11120 cc749bbd38fca38af7bef0817ba5237a 478 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 110 6.0E-16 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS11120 cc749bbd38fca38af7bef0817ba5237a 478 Gene3D G3DSA:3.30.1360.60 8 82 2.8E-23 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS11120 cc749bbd38fca38af7bef0817ba5237a 478 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SHYC_RS11120 cc749bbd38fca38af7bef0817ba5237a 478 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 463 7.7E-194 T 23-04-2016 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 SHYC_RS11120 cc749bbd38fca38af7bef0817ba5237a 478 PANTHER PTHR30175 7 470 7.9E-197 T 23-04-2016 SHYC_RS01035 e567de5c1fbedbf715a07700d58c9731 370 Gene3D G3DSA:3.90.1150.10 260 360 7.4E-7 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS01035 e567de5c1fbedbf715a07700d58c9731 370 Pfam PF00155 Aminotransferase class I and II 36 360 7.1E-36 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHYC_RS01035 e567de5c1fbedbf715a07700d58c9731 370 PANTHER PTHR13693 3 364 6.9E-83 T 23-04-2016 SHYC_RS01035 e567de5c1fbedbf715a07700d58c9731 370 SUPERFAMILY SSF53383 4 364 2.04E-72 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS01035 e567de5c1fbedbf715a07700d58c9731 370 PANTHER PTHR13693:SF53 3 364 6.9E-83 T 23-04-2016 SHYC_RS01035 e567de5c1fbedbf715a07700d58c9731 370 Gene3D G3DSA:3.40.640.10 58 259 8.4E-59 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS10430 9fa9e29171adccc7eb5de1951818590c 155 Pfam PF12821 Threonine/Serine exporter, ThrE 7 133 3.4E-32 T 23-04-2016 IPR024528 Threonine/Serine exporter, ThrE SHYC_RS10430 9fa9e29171adccc7eb5de1951818590c 155 PANTHER PTHR34390 1 132 1.4E-21 T 23-04-2016 SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 537 557 - T 23-04-2016 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 Gene3D G3DSA:1.10.1040.10 339 397 5.4E-9 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 Gene3D G3DSA:1.10.1040.10 191 287 9.4E-18 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 SUPERFAMILY SSF51735 1 188 2.67E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 186 4.0E-50 T 23-04-2016 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 SUPERFAMILY SSF48179 188 305 1.62E-21 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 Gene3D G3DSA:3.90.226.10 453 589 2.3E-26 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 PANTHER PTHR23309 1 459 4.5E-114 T 23-04-2016 SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 PANTHER PTHR23309:SF2 1 459 4.5E-114 T 23-04-2016 SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 Gene3D G3DSA:3.40.50.720 1 190 9.3E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 SUPERFAMILY SSF48179 337 418 1.02E-11 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 Pfam PF00378 Enoyl-CoA hydratase/isomerase 453 590 2.2E-18 T 23-04-2016 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 SUPERFAMILY SSF52096 449 750 2.13E-35 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS01100 a13fe00fa269928e130efe650d14cb7b 753 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 189 286 2.3E-18 T 23-04-2016 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7726|UniPathway: UPA00659 SHYC_RS09480 589a17480a4662c9ede8c7283533f59d 131 SUPERFAMILY SSF110455 1 111 7.59E-31 T 23-04-2016 SHYC_RS09480 589a17480a4662c9ede8c7283533f59d 131 Gene3D G3DSA:3.40.1360.20 2 111 3.6E-34 T 23-04-2016 SHYC_RS09480 589a17480a4662c9ede8c7283533f59d 131 Pfam PF01751 Toprim domain 7 76 1.1E-5 T 23-04-2016 IPR006171 Toprim domain SHYC_RS09480 589a17480a4662c9ede8c7283533f59d 131 SMART SM00493 5 79 1.2E-10 T 23-04-2016 IPR006171 Toprim domain SHYC_RS06525 3f5afccbf2827ccb1e764c351e9ee533 276 PANTHER PTHR31756:SF3 6 269 1.1E-114 T 23-04-2016 SHYC_RS06525 3f5afccbf2827ccb1e764c351e9ee533 276 PANTHER PTHR31756 6 269 1.1E-114 T 23-04-2016 SHYC_RS06525 3f5afccbf2827ccb1e764c351e9ee533 276 Pfam PF03618 Kinase/pyrophosphorylase 6 263 1.7E-96 T 23-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 SHYC_RS06525 3f5afccbf2827ccb1e764c351e9ee533 276 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 269 59.291 T 23-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein SHYC_RS02635 7413114e890735c7778de4ae3353567e 202 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 1 187 31.311 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SHYC_RS02635 7413114e890735c7778de4ae3353567e 202 PANTHER PTHR10429:SF0 1 201 4.8E-63 T 23-04-2016 SHYC_RS02635 7413114e890735c7778de4ae3353567e 202 SUPERFAMILY SSF50486 2 193 2.67E-57 T 23-04-2016 IPR011034 Formyl transferase, C-terminal-like GO:0003824 SHYC_RS02635 7413114e890735c7778de4ae3353567e 202 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 3 184 3.3E-49 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SHYC_RS02635 7413114e890735c7778de4ae3353567e 202 PANTHER PTHR10429 1 201 4.8E-63 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SHYC_RS02635 7413114e890735c7778de4ae3353567e 202 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 2 187 2.7E-48 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SHYC_RS02635 7413114e890735c7778de4ae3353567e 202 Gene3D G3DSA:3.10.300.10 2 192 2.8E-62 T 23-04-2016 IPR003180 Methylpurine-DNA glycosylase (MPG) GO:0003677|GO:0003905|GO:0006284 SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 Gene3D G3DSA:3.40.50.300 132 281 6.3E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 Gene3D G3DSA:3.40.50.300 2 100 6.3E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 Gene3D G3DSA:3.40.50.300 322 532 1.4E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 Pfam PF12848 ABC transporter 224 304 3.3E-20 T 23-04-2016 IPR032781 ABC-transporter extension domain SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 Pfam PF00005 ABC transporter 335 469 6.0E-19 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 Pfam PF00005 ABC transporter 18 184 2.4E-20 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 SUPERFAMILY SSF52540 296 512 5.25E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 SUPERFAMILY SSF52540 125 252 1.48E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 SUPERFAMILY SSF52540 2 92 1.48E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 PANTHER PTHR19211:SF38 1 528 0.0 T 23-04-2016 SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 SMART SM00382 26 238 5.3E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 SMART SM00382 344 514 1.7E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS07305 f82eb9e4cd9d7dd7b8cfe976b799afca 535 PANTHER PTHR19211 1 528 0.0 T 23-04-2016 SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 SMART SM00487 247 511 0.0089 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 SUPERFAMILY SSF52540 689 854 1.33E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 SUPERFAMILY SSF52540 401 471 1.33E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 SUPERFAMILY SSF52540 643 657 1.33E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 SUPERFAMILY SSF52540 262 319 1.33E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 Pfam PF13307 Helicase C-terminal domain 715 873 3.6E-30 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 SMART SM00491 732 860 3.3E-11 T 23-04-2016 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 Pfam PF04851 Type III restriction enzyme, res subunit 249 476 2.8E-6 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 5 891 7.3E-270 T 23-04-2016 IPR006310 DnaQ exonuclease/DinG helicase, predicted SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 Gene3D G3DSA:3.40.50.300 720 865 2.9E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 PANTHER PTHR30231 1 382 4.6E-87 T 23-04-2016 SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 Pfam PF00929 Exonuclease 8 161 6.7E-30 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 PANTHER PTHR30231:SF8 1 382 4.6E-87 T 23-04-2016 SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 SMART SM00479 5 171 5.7E-36 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 168 5.1E-27 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 Gene3D G3DSA:3.30.420.10 4 179 1.3E-47 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 SUPERFAMILY SSF53098 5 173 3.88E-46 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 Gene3D G3DSA:3.40.50.300 237 383 1.4E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07045 42e3cc37255ad619ae90f9a0a16c5654 897 Gene3D G3DSA:3.40.50.300 444 475 1.4E-16 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 Pfam PF00344 SecY translocase 69 412 2.6E-111 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PANTHER PTHR10906 4 427 1.0E-201 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 SUPERFAMILY SSF103491 1 418 7.19E-124 T 23-04-2016 IPR023201 SecY subunit domain SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PIRSF PIRSF004557 1 429 1.3E-128 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 ProSitePatterns PS00756 Protein secY signature 2. 166 183 - T 23-04-2016 IPR030659 SecY conserved site SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 1.6E-98 T 23-04-2016 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 363 381 1.6E-98 T 23-04-2016 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 1.6E-98 T 23-04-2016 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 308 330 1.6E-98 T 23-04-2016 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 147 172 1.6E-98 T 23-04-2016 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 173 196 1.6E-98 T 23-04-2016 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 397 415 1.6E-98 T 23-04-2016 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 1.6E-98 T 23-04-2016 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PRINTS PR00303 Preprotein translocase SecY subunit signature 268 287 1.6E-98 T 23-04-2016 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 428 28.371 T 23-04-2016 IPR026593 Protein translocase subunit SecY SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 Gene3D G3DSA:1.10.3370.10 1 428 3.8E-147 T 23-04-2016 IPR023201 SecY subunit domain SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 423 1.9E-148 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 PANTHER PTHR10906:SF2 4 427 1.0E-201 T 23-04-2016 SHYC_RS03160 b93988d6e8adc4c9dffb57f7ee8d94ac 430 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 23-04-2016 IPR030659 SecY conserved site SHYC_RS01570 852243ac7a68a3b7cd228b130ed685a2 235 Gene3D G3DSA:3.30.1330.80 3 104 2.5E-30 T 23-04-2016 SHYC_RS01570 852243ac7a68a3b7cd228b130ed685a2 235 SUPERFAMILY SSF117856 4 235 2.67E-65 T 23-04-2016 SHYC_RS01570 852243ac7a68a3b7cd228b130ed685a2 235 Pfam PF03306 Alpha-acetolactate decarboxylase 6 223 8.6E-66 T 23-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 SHYC_RS01570 852243ac7a68a3b7cd228b130ed685a2 235 PANTHER PTHR35524 6 235 1.0E-64 T 23-04-2016 SHYC_RS01570 852243ac7a68a3b7cd228b130ed685a2 235 PIRSF PIRSF001332 1 235 4.0E-76 T 23-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 SHYC_RS01570 852243ac7a68a3b7cd228b130ed685a2 235 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 5 235 1.4E-66 T 23-04-2016 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939|UniPathway: UPA00626 SHYC_RS01570 852243ac7a68a3b7cd228b130ed685a2 235 Gene3D G3DSA:3.30.1330.80 105 202 7.0E-40 T 23-04-2016 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 Gene3D G3DSA:2.40.50.100 28 91 1.3E-31 T 23-04-2016 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 SUPERFAMILY SSF110324 10 91 3.45E-32 T 23-04-2016 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 PRINTS PR00063 Ribosomal protein L27 signature 62 86 3.1E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 PRINTS PR00063 Ribosomal protein L27 signature 12 36 3.1E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 PRINTS PR00063 Ribosomal protein L27 signature 37 61 3.1E-38 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 2.5E-39 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 26.998 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 PANTHER PTHR15893 4 94 4.0E-46 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 23-04-2016 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 3.0E-17 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06145 735fdc7b699a0734b0151a982135cceb 94 Pfam PF01016 Ribosomal L27 protein 10 89 2.5E-34 T 23-04-2016 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS09370 aca1d7b8c08d8417a31589e4199f8a6e 406 PIRSF PIRSF500216 1 406 1.8E-145 T 23-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 SHYC_RS09370 aca1d7b8c08d8417a31589e4199f8a6e 406 PANTHER PTHR13285 3 403 7.2E-52 T 23-04-2016 SHYC_RS09370 aca1d7b8c08d8417a31589e4199f8a6e 406 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 3 405 4.2E-144 T 23-04-2016 IPR024024 D-alanyl transfer protein DltB UniPathway: UPA00556 SHYC_RS09370 aca1d7b8c08d8417a31589e4199f8a6e 406 PIRSF PIRSF016636 2 405 4.9E-73 T 23-04-2016 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB SHYC_RS09370 aca1d7b8c08d8417a31589e4199f8a6e 406 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 59 374 3.5E-15 T 23-04-2016 IPR004299 Membrane bound O-acyl transferase, MBOAT SHYC_RS10570 1f485e777670ebca22440be624be27aa 292 PANTHER PTHR36445:SF1 28 292 6.6E-94 T 23-04-2016 SHYC_RS10570 1f485e777670ebca22440be624be27aa 292 Gene3D G3DSA:3.10.270.10 32 289 8.5E-79 T 23-04-2016 SHYC_RS10570 1f485e777670ebca22440be624be27aa 292 TIGRFAM TIGR00294 TIGR00294: GTP cyclohydrolase 14 287 8.4E-50 T 23-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SHYC_RS10570 1f485e777670ebca22440be624be27aa 292 Pfam PF02649 Type I GTP cyclohydrolase folE2 33 286 2.8E-69 T 23-04-2016 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SHYC_RS10570 1f485e777670ebca22440be624be27aa 292 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 33 291 30.823 T 23-04-2016 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|UniPathway: UPA00848 SHYC_RS10570 1f485e777670ebca22440be624be27aa 292 PANTHER PTHR36445 28 292 6.6E-94 T 23-04-2016 SHYC_RS03700 e51c98ca5fafefbdcdf64bfbe4221149 67 Pfam PF11772 DNA-directed RNA polymerase subunit beta 25 58 1.5E-5 T 23-04-2016 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA SHYC_RS08925 0de3516e8d6dc8301f58f786c857abd7 185 Gene3D G3DSA:3.40.630.30 1 184 1.1E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08925 0de3516e8d6dc8301f58f786c857abd7 185 Pfam PF00583 Acetyltransferase (GNAT) family 62 166 2.6E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS08925 0de3516e8d6dc8301f58f786c857abd7 185 SUPERFAMILY SSF55729 1 176 6.57E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08925 0de3516e8d6dc8301f58f786c857abd7 185 PANTHER PTHR23091 113 166 1.8E-14 T 23-04-2016 SHYC_RS08925 0de3516e8d6dc8301f58f786c857abd7 185 PANTHER PTHR23091 1 76 1.8E-14 T 23-04-2016 SHYC_RS04670 6ad42109c2b2b7feca1bcf261c160148 320 Pfam PF00375 Sodium:dicarboxylate symporter family 6 320 3.8E-87 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04670 6ad42109c2b2b7feca1bcf261c160148 320 Gene3D G3DSA:1.10.3860.10 2 320 6.8E-87 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04670 6ad42109c2b2b7feca1bcf261c160148 320 SUPERFAMILY SSF118215 6 320 1.7E-78 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04670 6ad42109c2b2b7feca1bcf261c160148 320 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 1.5E-30 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04670 6ad42109c2b2b7feca1bcf261c160148 320 PRINTS PR00173 Glutamate-aspartate symporter signature 308 320 1.5E-30 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04670 6ad42109c2b2b7feca1bcf261c160148 320 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.5E-30 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04670 6ad42109c2b2b7feca1bcf261c160148 320 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 1.5E-30 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04670 6ad42109c2b2b7feca1bcf261c160148 320 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.5E-30 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04670 6ad42109c2b2b7feca1bcf261c160148 320 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.5E-30 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04670 6ad42109c2b2b7feca1bcf261c160148 320 PANTHER PTHR11958 1 320 2.8E-93 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 PANTHER PTHR11661 2 140 1.5E-73 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 7.6E-30 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 5.0E-14 T 23-04-2016 SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 2.8E-26 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 140 - T 23-04-2016 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 SUPERFAMILY SSF46906 67 140 5.63E-28 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 SMART SM00649 9 140 1.3E-87 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 SUPERFAMILY SSF54747 2 84 9.94E-30 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 140 7.1E-64 T 23-04-2016 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 140 30.924 T 23-04-2016 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 Gene3D G3DSA:1.10.10.250 72 140 1.0E-33 T 23-04-2016 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 SHYC_RS10685 c45cf41c8d4203942c6aa0fe05efd590 140 Gene3D G3DSA:3.30.1550.10 2 71 2.6E-38 T 23-04-2016 IPR020784 Ribosomal protein L11, N-terminal SHYC_RS02200 24196e25e98a89985c1590e9baa05aeb 591 SUPERFAMILY SSF52540 344 585 6.92E-86 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02200 24196e25e98a89985c1590e9baa05aeb 591 SMART SM00382 375 567 5.4E-14 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS02200 24196e25e98a89985c1590e9baa05aeb 591 PANTHER PTHR24221:SF258 8 588 8.2E-282 T 23-04-2016 SHYC_RS02200 24196e25e98a89985c1590e9baa05aeb 591 SUPERFAMILY SSF90123 19 330 3.01E-73 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS02200 24196e25e98a89985c1590e9baa05aeb 591 PANTHER PTHR24221 8 588 8.2E-282 T 23-04-2016 SHYC_RS02200 24196e25e98a89985c1590e9baa05aeb 591 Gene3D G3DSA:1.20.1560.10 19 330 1.1E-75 T 23-04-2016 SHYC_RS02200 24196e25e98a89985c1590e9baa05aeb 591 Gene3D G3DSA:3.40.50.300 349 580 4.4E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02200 24196e25e98a89985c1590e9baa05aeb 591 Pfam PF00005 ABC transporter 366 515 9.7E-32 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS02200 24196e25e98a89985c1590e9baa05aeb 591 Pfam PF00664 ABC transporter transmembrane region 32 304 7.7E-41 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS02200 24196e25e98a89985c1590e9baa05aeb 591 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS06735 6069617f6ef9e189ecc8a501e6ca8634 151 Gene3D G3DSA:2.40.50.100 73 150 1.0E-29 T 23-04-2016 SHYC_RS06735 6069617f6ef9e189ecc8a501e6ca8634 151 SUPERFAMILY SSF51230 74 150 2.49E-23 T 23-04-2016 IPR011053 Single hybrid motif SHYC_RS06735 6069617f6ef9e189ecc8a501e6ca8634 151 PANTHER PTHR23151 1 151 4.4E-69 T 23-04-2016 SHYC_RS06735 6069617f6ef9e189ecc8a501e6ca8634 151 Pfam PF00364 Biotin-requiring enzyme 77 149 3.3E-23 T 23-04-2016 IPR000089 Biotin/lipoyl attachment SHYC_RS06735 6069617f6ef9e189ecc8a501e6ca8634 151 PANTHER PTHR23151:SF64 1 151 4.4E-69 T 23-04-2016 SHYC_RS06735 6069617f6ef9e189ecc8a501e6ca8634 151 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 107 124 - T 23-04-2016 IPR001882 Biotin-binding site SHYC_RS06735 6069617f6ef9e189ecc8a501e6ca8634 151 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 151 8.4E-53 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SHYC_RS06735 6069617f6ef9e189ecc8a501e6ca8634 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 112 125 5.4E-16 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SHYC_RS06735 6069617f6ef9e189ecc8a501e6ca8634 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 97 111 5.4E-16 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SHYC_RS06735 6069617f6ef9e189ecc8a501e6ca8634 151 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 80 93 5.4E-16 T 23-04-2016 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 UniPathway: UPA00094 SHYC_RS03235 b5c9105a8ec0184747d58b1fb86c3dc8 242 SMART SM00422 5 73 1.2E-19 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHYC_RS03235 b5c9105a8ec0184747d58b1fb86c3dc8 242 Gene3D G3DSA:1.10.490.50 155 239 1.3E-8 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain SHYC_RS03235 b5c9105a8ec0184747d58b1fb86c3dc8 242 SUPERFAMILY SSF46955 5 106 2.27E-24 T 23-04-2016 IPR009061 Putative DNA-binding domain SHYC_RS03235 b5c9105a8ec0184747d58b1fb86c3dc8 242 Gene3D G3DSA:1.10.1660.10 5 107 1.4E-27 T 23-04-2016 SHYC_RS03235 b5c9105a8ec0184747d58b1fb86c3dc8 242 PANTHER PTHR30204 1 222 3.2E-29 T 23-04-2016 SHYC_RS03235 b5c9105a8ec0184747d58b1fb86c3dc8 242 SUPERFAMILY SSF89082 155 240 1.83E-8 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain SHYC_RS03235 b5c9105a8ec0184747d58b1fb86c3dc8 242 Pfam PF07739 TipAS antibiotic-recognition domain 125 237 3.9E-13 T 23-04-2016 IPR012925 TipAS antibiotic-recognition domain SHYC_RS03235 b5c9105a8ec0184747d58b1fb86c3dc8 242 Pfam PF13411 MerR HTH family regulatory protein 5 72 9.0E-18 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHYC_RS03235 b5c9105a8ec0184747d58b1fb86c3dc8 242 PANTHER PTHR30204:SF27 1 222 3.2E-29 T 23-04-2016 SHYC_RS09250 aff34434ba99493ad7c7c4014fceba07 514 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 312 323 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS09250 aff34434ba99493ad7c7c4014fceba07 514 PANTHER PTHR11699:SF18 15 512 3.9E-226 T 23-04-2016 SHYC_RS09250 aff34434ba99493ad7c7c4014fceba07 514 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 284 291 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS09250 aff34434ba99493ad7c7c4014fceba07 514 Pfam PF00171 Aldehyde dehydrogenase family 49 509 1.8E-157 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS09250 aff34434ba99493ad7c7c4014fceba07 514 SUPERFAMILY SSF53720 3 511 6.68E-155 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHYC_RS09250 aff34434ba99493ad7c7c4014fceba07 514 Gene3D G3DSA:3.40.605.10 35 297 9.0E-83 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS09250 aff34434ba99493ad7c7c4014fceba07 514 PANTHER PTHR11699 15 512 3.9E-226 T 23-04-2016 SHYC_RS09250 aff34434ba99493ad7c7c4014fceba07 514 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 4 513 5.3E-237 T 23-04-2016 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853|UniPathway: UPA00261 SHYC_RS09250 aff34434ba99493ad7c7c4014fceba07 514 Gene3D G3DSA:3.40.309.10 298 484 2.0E-66 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHYC_RS03560 19505fd1e199ca27c6e91346aee40090 535 Hamap MF_01227 CTP synthase [pyrG]. 2 533 52.98 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SHYC_RS03560 19505fd1e199ca27c6e91346aee40090 535 SUPERFAMILY SSF52317 291 533 1.48E-85 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS03560 19505fd1e199ca27c6e91346aee40090 535 Pfam PF00117 Glutamine amidotransferase class-I 303 528 3.1E-56 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SHYC_RS03560 19505fd1e199ca27c6e91346aee40090 535 TIGRFAM TIGR00337 PyrG: CTP synthase 1 528 1.1E-255 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SHYC_RS03560 19505fd1e199ca27c6e91346aee40090 535 Gene3D G3DSA:3.40.50.300 1 286 2.7E-135 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03560 19505fd1e199ca27c6e91346aee40090 535 Gene3D G3DSA:3.40.50.880 290 533 7.4E-101 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS03560 19505fd1e199ca27c6e91346aee40090 535 SUPERFAMILY SSF52540 1 269 2.52E-124 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03560 19505fd1e199ca27c6e91346aee40090 535 Pfam PF06418 CTP synthase N-terminus 3 267 1.9E-127 T 23-04-2016 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SHYC_RS03560 19505fd1e199ca27c6e91346aee40090 535 PANTHER PTHR11550 1 533 0.0 T 23-04-2016 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: REACT_1698|UniPathway: UPA00159 SHYC_RS08675 52d344236bd17618bff0faec7033870f 88 Gene3D G3DSA:3.30.1340.10 1 83 4.0E-34 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like SHYC_RS08675 52d344236bd17618bff0faec7033870f 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 23-04-2016 IPR002114 Phosphotransferase system, HPr serine phosphorylation site SHYC_RS08675 52d344236bd17618bff0faec7033870f 88 SUPERFAMILY SSF55594 1 83 2.09E-28 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like SHYC_RS08675 52d344236bd17618bff0faec7033870f 88 PANTHER PTHR30181 1 87 2.8E-37 T 23-04-2016 SHYC_RS08675 52d344236bd17618bff0faec7033870f 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 23-04-2016 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site SHYC_RS08675 52d344236bd17618bff0faec7033870f 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 8.4E-34 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like SHYC_RS08675 52d344236bd17618bff0faec7033870f 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.2E-25 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like SHYC_RS08675 52d344236bd17618bff0faec7033870f 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.2E-25 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like SHYC_RS08675 52d344236bd17618bff0faec7033870f 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.2E-25 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like SHYC_RS08675 52d344236bd17618bff0faec7033870f 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.5E-30 T 23-04-2016 IPR000032 Phosphocarrier HPr protein-like SHYC_RS10540 e40eff23ab209dfdc4a609cb23182bf7 242 PANTHER PTHR11280 1 238 6.5E-93 T 23-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SHYC_RS10540 e40eff23ab209dfdc4a609cb23182bf7 242 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 242 39.511 T 23-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SHYC_RS10540 e40eff23ab209dfdc4a609cb23182bf7 242 SUPERFAMILY SSF100950 1 239 4.56E-81 T 23-04-2016 SHYC_RS10540 e40eff23ab209dfdc4a609cb23182bf7 242 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 12 227 9.5E-20 T 23-04-2016 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 SHYC_RS10540 e40eff23ab209dfdc4a609cb23182bf7 242 Gene3D G3DSA:3.40.50.1360 1 239 1.1E-83 T 23-04-2016 SHYC_RS10540 e40eff23ab209dfdc4a609cb23182bf7 242 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 121 139 - T 23-04-2016 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SHYC_RS10540 e40eff23ab209dfdc4a609cb23182bf7 242 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 239 2.5E-74 T 23-04-2016 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|UniPathway: UPA00629 SHYC_RS03975 8c8dd2f7ed057d260b5566a129213818 360 Pfam PF04143 Sulphur transport 21 332 1.0E-97 T 23-04-2016 IPR007272 Sulphur transport domain SHYC_RS03975 8c8dd2f7ed057d260b5566a129213818 360 PANTHER PTHR30574 5 349 4.0E-61 T 23-04-2016 SHYC_RS03975 8c8dd2f7ed057d260b5566a129213818 360 PANTHER PTHR30574:SF1 5 349 4.0E-61 T 23-04-2016 SHYC_RS02370 c0ea83649ecf59e60b888e8f4c3563a3 106 PANTHER PTHR21496 2 103 1.1E-25 T 23-04-2016 SHYC_RS02370 c0ea83649ecf59e60b888e8f4c3563a3 106 Gene3D G3DSA:2.102.10.10 6 105 1.0E-29 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHYC_RS02370 c0ea83649ecf59e60b888e8f4c3563a3 106 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 8 104 5.1E-25 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 SHYC_RS02370 c0ea83649ecf59e60b888e8f4c3563a3 106 SUPERFAMILY SSF50022 7 106 1.7E-32 T 23-04-2016 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 SHYC_RS02370 c0ea83649ecf59e60b888e8f4c3563a3 106 Pfam PF13806 Rieske-like [2Fe-2S] domain 9 103 2.6E-18 T 23-04-2016 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 SHYC_RS03945 8783b88079bb947fac79b8f8f5327dae 140 Gene3D G3DSA:3.40.630.30 1 139 8.8E-31 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03945 8783b88079bb947fac79b8f8f5327dae 140 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 5 135 7.9E-37 T 23-04-2016 IPR006464 Ribosomal-protein-alanine acetyltransferase GO:0006474|GO:0016407 SHYC_RS03945 8783b88079bb947fac79b8f8f5327dae 140 PANTHER PTHR23091 1 139 2.6E-54 T 23-04-2016 SHYC_RS03945 8783b88079bb947fac79b8f8f5327dae 140 Pfam PF00583 Acetyltransferase (GNAT) family 43 117 2.6E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS03945 8783b88079bb947fac79b8f8f5327dae 140 PANTHER PTHR23091:SF1 1 139 2.6E-54 T 23-04-2016 SHYC_RS03945 8783b88079bb947fac79b8f8f5327dae 140 SUPERFAMILY SSF55729 1 139 7.51E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10725 03336eae8cae1187fb1fbdd8f0e40baf 213 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 5 166 7.8E-76 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SHYC_RS10725 03336eae8cae1187fb1fbdd8f0e40baf 213 Gene3D G3DSA:1.10.3130.10 2 59 2.6E-22 T 23-04-2016 SHYC_RS10725 03336eae8cae1187fb1fbdd8f0e40baf 213 Gene3D G3DSA:2.160.10.10 60 204 6.3E-39 T 23-04-2016 SHYC_RS10725 03336eae8cae1187fb1fbdd8f0e40baf 213 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SHYC_RS10725 03336eae8cae1187fb1fbdd8f0e40baf 213 SUPERFAMILY SSF51161 4 170 3.05E-55 T 23-04-2016 IPR011004 Trimeric LpxA-like SHYC_RS10725 03336eae8cae1187fb1fbdd8f0e40baf 213 PANTHER PTHR23416:SF55 1 213 7.7E-104 T 23-04-2016 SHYC_RS10725 03336eae8cae1187fb1fbdd8f0e40baf 213 PANTHER PTHR23416 1 213 7.7E-104 T 23-04-2016 SHYC_RS10725 03336eae8cae1187fb1fbdd8f0e40baf 213 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 151 2.7E-8 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS10725 03336eae8cae1187fb1fbdd8f0e40baf 213 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 71 108 4.8E-6 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS10725 03336eae8cae1187fb1fbdd8f0e40baf 213 PIRSF PIRSF000441 1 210 1.5E-82 T 23-04-2016 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|UniPathway: UPA00136 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 Gene3D G3DSA:3.40.190.80 168 256 3.1E-18 T 23-04-2016 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 175 196 2.23E-20 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 42 62 2.23E-20 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 64 80 2.23E-20 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 135 158 2.23E-20 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 206 230 2.23E-20 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 PRINTS PR00377 Inositol monophosphatase superfamily signature 86 102 2.23E-20 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 SUPERFAMILY SSF56655 30 256 2.09E-58 T 23-04-2016 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 Gene3D G3DSA:3.30.540.10 30 161 1.0E-33 T 23-04-2016 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 PANTHER PTHR20854 36 256 2.1E-52 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 PANTHER PTHR20854:SF4 36 256 2.1E-52 T 23-04-2016 SHYC_RS02785 5ac0879db9bc64b053fc9713daab01b7 270 Pfam PF00459 Inositol monophosphatase family 33 251 1.3E-38 T 23-04-2016 IPR000760 Inositol monophosphatase GO:0046854 SHYC_RS06610 8dbc7aab0af5c9e59fca481288d4ef37 289 ProSitePatterns PS00211 ABC transporters family signature. 186 200 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS06610 8dbc7aab0af5c9e59fca481288d4ef37 289 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 43 289 2.5E-124 T 23-04-2016 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 SHYC_RS06610 8dbc7aab0af5c9e59fca481288d4ef37 289 Pfam PF00005 ABC transporter 58 214 1.4E-31 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS06610 8dbc7aab0af5c9e59fca481288d4ef37 289 SMART SM00382 67 260 1.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS06610 8dbc7aab0af5c9e59fca481288d4ef37 289 SUPERFAMILY SSF52540 38 276 2.13E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06610 8dbc7aab0af5c9e59fca481288d4ef37 289 PANTHER PTHR24220:SF585 44 287 5.0E-161 T 23-04-2016 SHYC_RS06610 8dbc7aab0af5c9e59fca481288d4ef37 289 PANTHER PTHR24220 44 287 5.0E-161 T 23-04-2016 SHYC_RS06610 8dbc7aab0af5c9e59fca481288d4ef37 289 Gene3D G3DSA:3.40.50.300 45 284 7.0E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04050 9504389abb2a222d07b0bd18b238dcd7 272 Gene3D G3DSA:3.20.20.70 30 184 5.5E-6 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS04050 9504389abb2a222d07b0bd18b238dcd7 272 PANTHER PTHR11228 25 190 5.4E-40 T 23-04-2016 SHYC_RS04050 9504389abb2a222d07b0bd18b238dcd7 272 SUPERFAMILY SSF102114 25 183 9.94E-8 T 23-04-2016 SHYC_RS04050 9504389abb2a222d07b0bd18b238dcd7 272 Pfam PF04055 Radical SAM superfamily 28 190 5.4E-9 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS04050 9504389abb2a222d07b0bd18b238dcd7 272 PANTHER PTHR11228:SF26 25 190 5.4E-40 T 23-04-2016 SHYC_RS09420 acb9098c771eadb847ef10daac9fa57f 282 Gene3D G3DSA:3.20.20.410 1 281 1.7E-89 T 23-04-2016 IPR002763 Protein of unknown function DUF72 SHYC_RS09420 acb9098c771eadb847ef10daac9fa57f 282 PANTHER PTHR30348 218 281 2.7E-116 T 23-04-2016 SHYC_RS09420 acb9098c771eadb847ef10daac9fa57f 282 PANTHER PTHR30348 1 201 2.7E-116 T 23-04-2016 SHYC_RS09420 acb9098c771eadb847ef10daac9fa57f 282 Pfam PF01904 Protein of unknown function DUF72 19 265 3.5E-59 T 23-04-2016 IPR002763 Protein of unknown function DUF72 SHYC_RS09420 acb9098c771eadb847ef10daac9fa57f 282 PANTHER PTHR30348:SF4 218 281 2.7E-116 T 23-04-2016 SHYC_RS09420 acb9098c771eadb847ef10daac9fa57f 282 PANTHER PTHR30348:SF4 1 201 2.7E-116 T 23-04-2016 SHYC_RS09420 acb9098c771eadb847ef10daac9fa57f 282 SUPERFAMILY SSF117396 1 269 4.71E-81 T 23-04-2016 IPR002763 Protein of unknown function DUF72 SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 Gene3D G3DSA:3.40.50.300 978 1178 3.1E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 Gene3D G3DSA:3.40.50.300 645 852 2.6E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 PANTHER PTHR22683:SF1 24 881 0.0 T 23-04-2016 SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 PANTHER PTHR22683:SF1 1064 1347 0.0 T 23-04-2016 SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 PANTHER PTHR22683:SF1 1383 1475 0.0 T 23-04-2016 SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 Pfam PF12538 DNA transporter 4 103 9.1E-5 T 23-04-2016 IPR022206 Firmicutes EssC, N-terminal SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 SUPERFAMILY SSF52540 625 874 3.06E-30 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 192 1473 0.0 T 23-04-2016 IPR023839 Firmicutes EssC, C-terminal SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 PANTHER PTHR22683 24 881 0.0 T 23-04-2016 SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 PANTHER PTHR22683 1064 1347 0.0 T 23-04-2016 SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 PANTHER PTHR22683 1383 1475 0.0 T 23-04-2016 SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 SUPERFAMILY SSF49879 86 181 3.23E-21 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 SUPERFAMILY SSF52540 945 1173 3.4E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 SUPERFAMILY SSF49879 1 57 4.22E-8 T 23-04-2016 IPR008984 SMAD/FHA domain GO:0005515 SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 Pfam PF01580 FtsK/SpoIIIE family 988 1175 2.4E-22 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SHYC_RS11260 9a57459eeaab99ff435d9207209c23e1 1475 Pfam PF01580 FtsK/SpoIIIE family 631 840 3.0E-32 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 PRINTS PR00990 Ribokinase signature 33 52 3.7E-33 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 PRINTS PR00990 Ribokinase signature 172 187 3.7E-33 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 PRINTS PR00990 Ribokinase signature 104 117 3.7E-33 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 PRINTS PR00990 Ribokinase signature 206 217 3.7E-33 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 PRINTS PR00990 Ribokinase signature 6 27 3.7E-33 T 23-04-2016 IPR002139 Ribokinase GO:0004747|GO:0006014 SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 PANTHER PTHR10584 1 288 1.7E-85 T 23-04-2016 SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 235 248 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 SUPERFAMILY SSF53613 3 288 5.61E-78 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 Pfam PF00294 pfkB family carbohydrate kinase 1 283 6.8E-68 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 PANTHER PTHR10584:SF166 1 288 1.7E-85 T 23-04-2016 SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 288 1.7E-95 T 23-04-2016 IPR011877 Ribokinase, bacterial type GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|UniPathway: UPA00916 SHYC_RS01170 d8f859c1797f6bccf61c19c997ba6924 293 Gene3D G3DSA:3.40.1190.20 1 290 9.9E-88 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 617 37.879 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 Gene3D G3DSA:1.10.8.60 344 408 1.2E-26 T 23-04-2016 SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 Gene3D G3DSA:3.40.50.300 159 343 1.4E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 Pfam PF01434 Peptidase family M41 395 603 8.7E-84 T 23-04-2016 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 SUPERFAMILY SSF52540 158 405 2.55E-74 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 112 604 1.9E-241 T 23-04-2016 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 SMART SM00382 197 336 1.7E-26 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 PANTHER PTHR23076:SF10 1 683 0.0 T 23-04-2016 SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 333 1.6E-46 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 PANTHER PTHR23076 1 683 0.0 T 23-04-2016 SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 23-04-2016 IPR003960 ATPase, AAA-type, conserved site GO:0005524 SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 SUPERFAMILY SSF140990 415 609 9.68E-71 T 23-04-2016 SHYC_RS10915 e4d92fd520ac6fe0ca7e133bf396b4a1 708 Pfam PF06480 FtsH Extracellular 9 93 3.5E-10 T 23-04-2016 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 SHYC_RS05805 2c7f4ad0ad7003412289f35ccb216205 377 Pfam PF13242 HAD-hyrolase-like 282 368 2.9E-12 T 23-04-2016 SHYC_RS05805 2c7f4ad0ad7003412289f35ccb216205 377 Gene3D G3DSA:3.40.50.1000 3 21 1.0E-25 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS05805 2c7f4ad0ad7003412289f35ccb216205 377 Gene3D G3DSA:3.40.50.1000 216 373 1.0E-25 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS05805 2c7f4ad0ad7003412289f35ccb216205 377 PANTHER PTHR18901 214 375 6.1E-14 T 23-04-2016 SHYC_RS05805 2c7f4ad0ad7003412289f35ccb216205 377 SUPERFAMILY SSF56784 4 374 3.45E-46 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 PIRSF PIRSF039088 1 501 2.7E-245 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 493 9.5E-47 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 SUPERFAMILY SSF52540 95 370 1.66E-97 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 50.608 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 498 1.6E-253 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 1.2E-72 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 SUPERFAMILY SSF47917 372 499 1.15E-47 T 23-04-2016 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal GO:0015991|GO:0016820|GO:0033178 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 Gene3D G3DSA:1.20.150.20 372 498 3.4E-50 T 23-04-2016 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 PANTHER PTHR15184:SF3 1 486 1.7E-298 T 23-04-2016 IPR005294 ATPase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 Gene3D G3DSA:2.40.30.20 2 93 4.4E-36 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 Gene3D G3DSA:3.40.50.300 94 371 1.7E-114 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 SUPERFAMILY SSF50615 11 94 7.26E-29 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 23-04-2016 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 2.0E-17 T 23-04-2016 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03670 c5aa41a415a3f82562ee60c9f397191f 502 PANTHER PTHR15184 1 486 1.7E-298 T 23-04-2016 SHYC_RS00040 9df8dfcdc6025247a269ebe6a90197a9 270 PANTHER PTHR12592:SF0 9 269 1.6E-64 T 23-04-2016 SHYC_RS00040 9df8dfcdc6025247a269ebe6a90197a9 270 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 6 266 3.9E-55 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SHYC_RS00040 9df8dfcdc6025247a269ebe6a90197a9 270 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 1 270 22.691 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SHYC_RS00040 9df8dfcdc6025247a269ebe6a90197a9 270 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 207 217 - T 23-04-2016 IPR017953 Carbohydrate kinase, predicted, conserved site SHYC_RS00040 9df8dfcdc6025247a269ebe6a90197a9 270 Gene3D G3DSA:3.40.1190.20 8 268 1.0E-72 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS00040 9df8dfcdc6025247a269ebe6a90197a9 270 SUPERFAMILY SSF53613 6 266 1.1E-62 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS00040 9df8dfcdc6025247a269ebe6a90197a9 270 Pfam PF01256 Carbohydrate kinase 25 262 4.0E-57 T 23-04-2016 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 SHYC_RS00040 9df8dfcdc6025247a269ebe6a90197a9 270 PANTHER PTHR12592 9 269 1.6E-64 T 23-04-2016 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 2.0E-171 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 SUPERFAMILY SSF52540 3 267 6.53E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 PANTHER PTHR22942 3 335 1.3E-200 T 23-04-2016 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 SMART SM00382 57 228 6.9E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 PRINTS PR00142 RecA protein signature 165 194 1.5E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 PRINTS PR00142 RecA protein signature 210 238 1.5E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 PRINTS PR00142 RecA protein signature 297 314 1.5E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 PRINTS PR00142 RecA protein signature 93 122 1.5E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 PRINTS PR00142 RecA protein signature 127 156 1.5E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 PRINTS PR00142 RecA protein signature 243 272 1.5E-84 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 Pfam PF00154 recA bacterial DNA recombination protein 7 268 6.7E-143 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 ProSitePatterns PS00321 recA signature. 213 221 - T 23-04-2016 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 Hamap MF_00268 Protein RecA [recA]. 5 329 53.099 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 Gene3D G3DSA:3.40.50.300 27 267 2.2E-81 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 PANTHER PTHR22942:SF1 3 335 1.3E-200 T 23-04-2016 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 Gene3D G3DSA:3.30.250.10 268 326 6.5E-30 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SHYC_RS07740 28ff83b06ea8b3e9e756d8d12583388b 347 SUPERFAMILY SSF54752 268 326 2.75E-22 T 23-04-2016 IPR023400 DNA recombination and repair protein RecA, C-terminal SHYC_RS07630 4cd18bb93574781652cb38ed77182792 157 PANTHER PTHR11592 3 157 5.6E-83 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SHYC_RS07630 4cd18bb93574781652cb38ed77182792 157 PRINTS PR01011 Glutathione peroxidase family signature 56 72 3.0E-20 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SHYC_RS07630 4cd18bb93574781652cb38ed77182792 157 PRINTS PR01011 Glutathione peroxidase family signature 21 38 3.0E-20 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SHYC_RS07630 4cd18bb93574781652cb38ed77182792 157 PRINTS PR01011 Glutathione peroxidase family signature 121 130 3.0E-20 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SHYC_RS07630 4cd18bb93574781652cb38ed77182792 157 PIRSF PIRSF000303 1 157 1.2E-67 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SHYC_RS07630 4cd18bb93574781652cb38ed77182792 157 Gene3D G3DSA:3.40.30.10 2 157 8.2E-71 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS07630 4cd18bb93574781652cb38ed77182792 157 Pfam PF00255 Glutathione peroxidase 3 110 9.7E-42 T 23-04-2016 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 SHYC_RS07630 4cd18bb93574781652cb38ed77182792 157 SUPERFAMILY SSF52833 1 157 4.99E-61 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS07630 4cd18bb93574781652cb38ed77182792 157 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 23-04-2016 IPR029760 Glutathione peroxidase conserved site SHYC_RS01185 2e966edf78769a46356f99dbe2aad9f7 312 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 306 1.2E-52 T 23-04-2016 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 SHYC_RS01185 2e966edf78769a46356f99dbe2aad9f7 312 PANTHER PTHR32196:SF21 7 312 5.1E-132 T 23-04-2016 SHYC_RS01185 2e966edf78769a46356f99dbe2aad9f7 312 PANTHER PTHR32196 7 312 5.1E-132 T 23-04-2016 SHYC_RS06330 5630f622102abd8dcd891c366febc613 147 Pfam PF00364 Biotin-requiring enzyme 72 146 2.4E-17 T 23-04-2016 IPR000089 Biotin/lipoyl attachment SHYC_RS06330 5630f622102abd8dcd891c366febc613 147 SUPERFAMILY SSF51230 71 146 8.77E-18 T 23-04-2016 IPR011053 Single hybrid motif SHYC_RS06330 5630f622102abd8dcd891c366febc613 147 PANTHER PTHR23151 72 146 1.4E-13 T 23-04-2016 SHYC_RS06330 5630f622102abd8dcd891c366febc613 147 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 103 120 - T 23-04-2016 IPR001882 Biotin-binding site SHYC_RS06330 5630f622102abd8dcd891c366febc613 147 Gene3D G3DSA:2.40.50.100 68 146 2.1E-23 T 23-04-2016 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 SUPERFAMILY SSF53850 14 262 6.09E-63 T 23-04-2016 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 300 482 3.0E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 Gene3D G3DSA:3.40.190.10 133 216 5.2E-22 T 23-04-2016 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 PANTHER PTHR30614 34 485 9.9E-257 T 23-04-2016 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 Gene3D G3DSA:3.40.190.10 37 128 7.6E-37 T 23-04-2016 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 Gene3D G3DSA:3.40.190.10 222 262 7.6E-37 T 23-04-2016 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 68 81 - T 23-04-2016 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 280 376 2.8E-27 T 23-04-2016 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 Gene3D G3DSA:1.10.3720.10 281 482 8.5E-53 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 PANTHER PTHR30614:SF15 34 485 9.9E-257 T 23-04-2016 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 SMART SM00062 42 263 1.0E-54 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 SUPERFAMILY SSF161098 280 472 1.02E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS04585 d6e846e2fde92d33ebf8d0e507788e84 485 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 262 3.5E-56 T 23-04-2016 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 Gene3D G3DSA:3.40.350.10 1 125 5.8E-26 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 SUPERFAMILY SSF53092 1 126 7.85E-25 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 23-04-2016 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 127 3.3E-25 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 SUPERFAMILY SSF55920 126 353 1.27E-79 T 23-04-2016 IPR000994 Peptidase M24, structural domain SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 PANTHER PTHR10804 1 352 2.6E-102 T 23-04-2016 SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 Pfam PF00557 Metallopeptidase family M24 135 337 2.9E-69 T 23-04-2016 IPR000994 Peptidase M24, structural domain SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 PANTHER PTHR10804:SF86 1 352 2.6E-102 T 23-04-2016 SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 Gene3D G3DSA:3.90.230.10 126 351 2.9E-87 T 23-04-2016 IPR000994 Peptidase M24, structural domain SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 5.6E-5 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SHYC_RS06725 f456336628cd3fd7586aa2365d5415c0 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 5.6E-5 T 23-04-2016 IPR001714 Peptidase M24, methionine aminopeptidase SHYC_RS11330 f5e5f88fdd772ad5015929a980bf8bce 106 Pfam PF00893 Small Multidrug Resistance protein 1 88 2.0E-18 T 23-04-2016 IPR000390 Small multidrug resistance protein family GO:0016021 SHYC_RS11330 f5e5f88fdd772ad5015929a980bf8bce 106 SUPERFAMILY SSF103481 6 99 1.7E-12 T 23-04-2016 SHYC_RS11330 f5e5f88fdd772ad5015929a980bf8bce 106 PANTHER PTHR30561 1 106 3.6E-30 T 23-04-2016 SHYC_RS11330 f5e5f88fdd772ad5015929a980bf8bce 106 PANTHER PTHR30561:SF7 1 106 3.6E-30 T 23-04-2016 SHYC_RS01820 dbe47cc043e4f2ea0c748a4c5795853a 395 Pfam PF12704 MacB-like periplasmic core domain 23 234 6.7E-24 T 23-04-2016 IPR025857 MacB-like periplasmic core domain SHYC_RS01820 dbe47cc043e4f2ea0c748a4c5795853a 395 Pfam PF02687 FtsX-like permease family 276 389 4.1E-20 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHYC_RS01820 dbe47cc043e4f2ea0c748a4c5795853a 395 PANTHER PTHR30572 7 395 1.4E-61 T 23-04-2016 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 PANTHER PTHR11817 1 585 2.7E-293 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 2.5E-188 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 Gene3D G3DSA:3.40.1380.20 326 471 7.0E-50 T 23-04-2016 IPR015794 Pyruvate kinase, alpha/beta GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 Gene3D G3DSA:2.40.33.10 73 168 3.7E-31 T 23-04-2016 IPR015806 Pyruvate kinase, beta-barrel insert domain GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 Pfam PF02887 Pyruvate kinase, alpha/beta domain 359 471 6.9E-36 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 SUPERFAMILY SSF51621 1 75 3.49E-102 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 SUPERFAMILY SSF51621 167 344 3.49E-102 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 23-04-2016 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.1E-76 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.1E-76 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.1E-76 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.1E-76 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.1E-76 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.1E-76 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.1E-76 T 23-04-2016 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 SUPERFAMILY SSF50800 71 167 9.77E-28 T 23-04-2016 IPR011037 Pyruvate kinase-like, insert domain SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 Gene3D G3DSA:3.20.20.60 2 72 2.1E-112 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 Gene3D G3DSA:3.20.20.60 169 325 2.1E-112 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 SUPERFAMILY SSF52009 465 582 3.27E-23 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 PANTHER PTHR11817:SF3 1 585 2.7E-293 T 23-04-2016 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 Gene3D G3DSA:3.50.30.10 507 582 1.2E-19 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 SUPERFAMILY SSF52935 323 473 4.97E-41 T 23-04-2016 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 Pfam PF00391 PEP-utilising enzyme, mobile domain 508 576 4.4E-16 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHYC_RS05950 1b0eade447832fd197400960a37948a5 586 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 8.5E-154 T 23-04-2016 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS04640 3d099250c04ccaf7c721602e1b954540 373 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 279 367 6.9E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS04640 3d099250c04ccaf7c721602e1b954540 373 SMART SM00065 22 173 0.0084 T 23-04-2016 IPR003018 GAF domain GO:0005515 SHYC_RS04640 3d099250c04ccaf7c721602e1b954540 373 Gene3D G3DSA:3.30.565.10 255 370 1.2E-6 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS04640 3d099250c04ccaf7c721602e1b954540 373 Pfam PF13185 GAF domain 21 163 1.9E-15 T 23-04-2016 IPR003018 GAF domain GO:0005515 SHYC_RS04640 3d099250c04ccaf7c721602e1b954540 373 Gene3D G3DSA:3.30.450.40 6 165 9.5E-33 T 23-04-2016 IPR029016 GAF domain-like SHYC_RS04640 3d099250c04ccaf7c721602e1b954540 373 PANTHER PTHR24421 162 367 2.7E-75 T 23-04-2016 SHYC_RS04640 3d099250c04ccaf7c721602e1b954540 373 Pfam PF07730 Histidine kinase 180 245 1.1E-17 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SHYC_RS04640 3d099250c04ccaf7c721602e1b954540 373 SUPERFAMILY SSF55874 245 366 7.86E-15 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS04640 3d099250c04ccaf7c721602e1b954540 373 PANTHER PTHR24421:SF20 162 367 2.7E-75 T 23-04-2016 SHYC_RS04640 3d099250c04ccaf7c721602e1b954540 373 SUPERFAMILY SSF55781 6 170 4.14E-18 T 23-04-2016 IPR029016 GAF domain-like SHYC_RS02165 a45d34142021968fbd38920d48879cc2 251 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 1 246 25.835 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SHYC_RS02165 a45d34142021968fbd38920d48879cc2 251 Pfam PF00290 Tryptophan synthase alpha chain 3 231 1.3E-69 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SHYC_RS02165 a45d34142021968fbd38920d48879cc2 251 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 30 43 - T 23-04-2016 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SHYC_RS02165 a45d34142021968fbd38920d48879cc2 251 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 3 238 2.2E-58 T 23-04-2016 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20|UniPathway: UPA00035 SHYC_RS02165 a45d34142021968fbd38920d48879cc2 251 SUPERFAMILY SSF51366 3 241 6.31E-67 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHYC_RS02165 a45d34142021968fbd38920d48879cc2 251 Gene3D G3DSA:3.20.20.70 3 238 4.6E-77 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS08775 fb5b45c7c4b3e1966c25310362607eb7 112 Pfam PF16403 Domain of unknown function (DUF5011) 34 105 2.9E-21 T 23-04-2016 IPR032179 Domain of unknown function DUF5011 SHYC_RS01110 cdae5cc5d1320e7d76742eb72fe72575 501 Gene3D G3DSA:3.40.50.980 14 160 4.5E-39 T 23-04-2016 SHYC_RS01110 cdae5cc5d1320e7d76742eb72fe72575 501 Pfam PF13193 AMP-binding enzyme C-terminal domain 408 483 1.5E-12 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SHYC_RS01110 cdae5cc5d1320e7d76742eb72fe72575 501 SUPERFAMILY SSF56801 15 495 3.53E-133 T 23-04-2016 SHYC_RS01110 cdae5cc5d1320e7d76742eb72fe72575 501 Gene3D G3DSA:3.40.50.980 161 320 2.7E-38 T 23-04-2016 SHYC_RS01110 cdae5cc5d1320e7d76742eb72fe72575 501 ProSitePatterns PS00455 Putative AMP-binding domain signature. 155 166 - T 23-04-2016 IPR020845 AMP-binding, conserved site SHYC_RS01110 cdae5cc5d1320e7d76742eb72fe72575 501 Gene3D G3DSA:2.30.38.10 321 393 6.7E-19 T 23-04-2016 SHYC_RS01110 cdae5cc5d1320e7d76742eb72fe72575 501 Pfam PF00501 AMP-binding enzyme 15 399 4.9E-94 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHYC_RS01110 cdae5cc5d1320e7d76742eb72fe72575 501 Gene3D G3DSA:3.30.300.30 396 498 4.6E-26 T 23-04-2016 SHYC_RS01110 cdae5cc5d1320e7d76742eb72fe72575 501 PANTHER PTHR24096 15 491 9.4E-132 T 23-04-2016 SHYC_RS07235 8484eca730f2c4e06fc839231f1e26e4 448 PANTHER PTHR30588:SF0 1 446 1.3E-172 T 23-04-2016 SHYC_RS07235 8484eca730f2c4e06fc839231f1e26e4 448 PANTHER PTHR30588 1 446 1.3E-172 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SHYC_RS07235 8484eca730f2c4e06fc839231f1e26e4 448 Pfam PF05525 Branched-chain amino acid transport protein 2 434 5.2E-137 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SHYC_RS07235 8484eca730f2c4e06fc839231f1e26e4 448 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 9 421 3.6E-141 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SHYC_RS05965 d43426cf899b28af27e1f93985c5fd3c 234 Pfam PF00072 Response regulator receiver domain 5 114 2.3E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS05965 d43426cf899b28af27e1f93985c5fd3c 234 SMART SM00862 154 230 5.0E-30 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS05965 d43426cf899b28af27e1f93985c5fd3c 234 SMART SM00448 3 114 5.8E-48 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS05965 d43426cf899b28af27e1f93985c5fd3c 234 SUPERFAMILY SSF46894 131 231 5.95E-32 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHYC_RS05965 d43426cf899b28af27e1f93985c5fd3c 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 230 2.4E-29 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS05965 d43426cf899b28af27e1f93985c5fd3c 234 PANTHER PTHR26402:SF614 3 233 9.0E-129 T 23-04-2016 SHYC_RS05965 d43426cf899b28af27e1f93985c5fd3c 234 Gene3D G3DSA:3.40.50.2300 3 123 7.7E-44 T 23-04-2016 SHYC_RS05965 d43426cf899b28af27e1f93985c5fd3c 234 SUPERFAMILY SSF52172 4 127 1.38E-43 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS05965 d43426cf899b28af27e1f93985c5fd3c 234 Gene3D G3DSA:1.10.10.10 131 232 1.6E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS05965 d43426cf899b28af27e1f93985c5fd3c 234 PANTHER PTHR26402 3 233 9.0E-129 T 23-04-2016 SHYC_RS05500 ceadd9d447af2c2c1244e30ae9c0c5a1 329 Pfam PF13378 Enolase C-terminal domain-like 139 314 3.7E-13 T 23-04-2016 IPR029065 Enolase C-terminal domain-like SHYC_RS05500 ceadd9d447af2c2c1244e30ae9c0c5a1 329 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 9 306 5.6E-69 T 23-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS05500 ceadd9d447af2c2c1244e30ae9c0c5a1 329 Gene3D G3DSA:3.30.390.10 1 119 8.2E-31 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHYC_RS05500 ceadd9d447af2c2c1244e30ae9c0c5a1 329 Gene3D G3DSA:3.20.20.120 138 315 6.9E-31 T 23-04-2016 IPR029065 Enolase C-terminal domain-like SHYC_RS05500 ceadd9d447af2c2c1244e30ae9c0c5a1 329 SUPERFAMILY SSF54826 1 110 5.2E-17 T 23-04-2016 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 SHYC_RS05500 ceadd9d447af2c2c1244e30ae9c0c5a1 329 PANTHER PTHR13794 4 317 1.5E-47 T 23-04-2016 IPR001354 Mandelate racemase/muconate lactonizing enzyme/methylaspartate ammonia-lyase GO:0003824|GO:0008152 SHYC_RS05500 ceadd9d447af2c2c1244e30ae9c0c5a1 329 PANTHER PTHR13794:SF8 4 317 1.5E-47 T 23-04-2016 IPR010197 o-succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS05500 ceadd9d447af2c2c1244e30ae9c0c5a1 329 SUPERFAMILY SSF51604 136 316 5.11E-24 T 23-04-2016 IPR029065 Enolase C-terminal domain-like SHYC_RS02895 6775df4c9d432a1448e6c26836083bae 504 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 39 441 1.3E-65 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS02895 6775df4c9d432a1448e6c26836083bae 504 PANTHER PTHR11819:SF161 7 504 4.1E-260 T 23-04-2016 SHYC_RS02895 6775df4c9d432a1448e6c26836083bae 504 PANTHER PTHR11819 7 504 4.1E-260 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS02895 6775df4c9d432a1448e6c26836083bae 504 Pfam PF00474 Sodium:solute symporter family 39 441 7.4E-43 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 Gene3D G3DSA:3.20.19.10 645 896 4.9E-78 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 Gene3D G3DSA:3.30.499.10 22 249 2.8E-78 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PANTHER PTHR11670 674 719 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PANTHER PTHR11670 758 899 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PANTHER PTHR11670 1 393 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PANTHER PTHR11670 423 658 0.0 T 23-04-2016 IPR015937 Aconitase/isopropylmalate dehydratase GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PANTHER PTHR11670:SF1 674 719 0.0 T 23-04-2016 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PANTHER PTHR11670:SF1 758 899 0.0 T 23-04-2016 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PANTHER PTHR11670:SF1 1 393 0.0 T 23-04-2016 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PANTHER PTHR11670:SF1 423 658 0.0 T 23-04-2016 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PRINTS PR00415 Aconitase family signature 372 386 1.2E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PRINTS PR00415 Aconitase family signature 203 216 1.2E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PRINTS PR00415 Aconitase family signature 438 449 1.2E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PRINTS PR00415 Aconitase family signature 500 513 1.2E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PRINTS PR00415 Aconitase family signature 146 159 1.2E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PRINTS PR00415 Aconitase family signature 293 306 1.2E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PRINTS PR00415 Aconitase family signature 217 232 1.2E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PRINTS PR00415 Aconitase family signature 279 292 1.2E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 PRINTS PR00415 Aconitase family signature 170 178 1.2E-40 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 ProSitePatterns PS01244 Aconitase family signature 2. 500 513 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 Gene3D G3DSA:3.30.499.10 426 582 1.9E-62 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 Gene3D G3DSA:3.30.499.10 368 393 1.9E-62 T 23-04-2016 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 Pfam PF00330 Aconitase family (aconitate hydratase) 76 569 4.8E-179 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 SUPERFAMILY SSF52016 638 897 6.67E-86 T 23-04-2016 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 SUPERFAMILY SSF53732 10 634 2.75E-222 T 23-04-2016 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 Gene3D G3DSA:3.40.1060.10 250 367 9.8E-37 T 23-04-2016 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 Pfam PF00694 Aconitase C-terminal domain 699 826 4.2E-46 T 23-04-2016 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 ProSitePatterns PS00450 Aconitase family signature 1. 434 450 - T 23-04-2016 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33|UniPathway: UPA00048 SHYC_RS07425 e722d3613c7f6187712dc60feb8693fe 899 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 898 0.0 T 23-04-2016 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 SHYC_RS10735 26a84b93b681222f09ca1160db37803a 158 SUPERFAMILY SSF69765 1 156 2.62E-64 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10735 26a84b93b681222f09ca1160db37803a 158 Gene3D G3DSA:3.30.1330.50 1 157 1.1E-68 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10735 26a84b93b681222f09ca1160db37803a 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 35.162 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10735 26a84b93b681222f09ca1160db37803a 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 23-04-2016 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10735 26a84b93b681222f09ca1160db37803a 158 PANTHER PTHR32125 1 153 4.0E-50 T 23-04-2016 SHYC_RS10735 26a84b93b681222f09ca1160db37803a 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 156 5.8E-65 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10735 26a84b93b681222f09ca1160db37803a 158 Pfam PF02542 YgbB family 2 155 1.1E-62 T 23-04-2016 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS08590 e46a283830457c223a465e55654816a5 179 SUPERFAMILY SSF51182 54 176 3.82E-20 T 23-04-2016 IPR011051 RmlC-like cupin domain SHYC_RS08590 e46a283830457c223a465e55654816a5 179 Pfam PF01381 Helix-turn-helix 7 61 6.5E-16 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS08590 e46a283830457c223a465e55654816a5 179 SUPERFAMILY SSF47413 1 64 5.07E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS08590 e46a283830457c223a465e55654816a5 179 Pfam PF07883 Cupin domain 107 171 1.0E-7 T 23-04-2016 IPR013096 Cupin 2, conserved barrel SHYC_RS08590 e46a283830457c223a465e55654816a5 179 PANTHER PTHR10245:SF49 1 175 4.2E-44 T 23-04-2016 SHYC_RS08590 e46a283830457c223a465e55654816a5 179 PANTHER PTHR10245 1 175 4.2E-44 T 23-04-2016 SHYC_RS08590 e46a283830457c223a465e55654816a5 179 Gene3D G3DSA:1.10.260.40 1 54 1.1E-21 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS08590 e46a283830457c223a465e55654816a5 179 Gene3D G3DSA:2.60.120.10 55 173 7.1E-21 T 23-04-2016 IPR014710 RmlC-like jelly roll fold SHYC_RS08590 e46a283830457c223a465e55654816a5 179 SMART SM00530 6 61 9.4E-17 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 Gene3D G3DSA:3.40.50.2300 169 271 7.6E-43 T 23-04-2016 SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 Pfam PF02378 Phosphotransferase system, EIIC 303 572 7.1E-17 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 2.4E-37 T 23-04-2016 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 PANTHER PTHR30505:SF0 43 626 4.5E-286 T 23-04-2016 SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 Gene3D G3DSA:3.40.930.10 1 152 4.2E-52 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 289 627 6.0E-119 T 23-04-2016 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 148 2.6E-42 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 PANTHER PTHR30505 43 626 4.5E-286 T 23-04-2016 SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 SUPERFAMILY SSF55804 1 148 2.88E-42 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 176 266 2.8E-17 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 SUPERFAMILY SSF52794 174 271 4.36E-36 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHYC_RS09950 a3849b8a3b85dec0c94e4143a7e3512b 637 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 176 258 8.8E-31 T 23-04-2016 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 SHYC_RS10085 aa79d2de7183785acd88833f42b681db 163 Pfam PF04306 Protein of unknown function (DUF456) 22 157 1.1E-37 T 23-04-2016 IPR007403 Protein of unknown function DUF456 SHYC_RS10085 aa79d2de7183785acd88833f42b681db 163 PANTHER PTHR39165:SF1 1 162 1.4E-45 T 23-04-2016 SHYC_RS10085 aa79d2de7183785acd88833f42b681db 163 PANTHER PTHR39165 1 162 1.4E-45 T 23-04-2016 SHYC_RS01065 d3692b723f660669d6dae35b7f178276 520 SUPERFAMILY SSF53474 333 420 2.4E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01065 d3692b723f660669d6dae35b7f178276 520 TIGRFAM TIGR03712 acc_sec_asp2: accessory Sec system protein Asp2 6 514 2.7E-210 T 23-04-2016 IPR022267 Accessory Sec system protein Asp2 GO:0015031 SHYC_RS01065 d3692b723f660669d6dae35b7f178276 520 Pfam PF16929 Accessory Sec system GspB-transporter 5 513 2.2E-196 T 23-04-2016 IPR022267 Accessory Sec system protein Asp2 GO:0015031 SHYC_RS01065 d3692b723f660669d6dae35b7f178276 520 Gene3D G3DSA:3.40.50.1820 325 389 7.9E-5 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01065 d3692b723f660669d6dae35b7f178276 520 Gene3D G3DSA:3.40.50.1820 234 262 7.9E-5 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS11815 d93f62b7531fe915080788cc1abb72ce 158 PANTHER PTHR34473 1 158 7.7E-18 T 23-04-2016 SHYC_RS11815 d93f62b7531fe915080788cc1abb72ce 158 Pfam PF03703 Bacterial PH domain 73 146 1.3E-8 T 23-04-2016 IPR005182 Domain of unknown function DUF304 SHYC_RS11815 d93f62b7531fe915080788cc1abb72ce 158 PANTHER PTHR34473:SF2 1 158 7.7E-18 T 23-04-2016 SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 Hamap MF_00104 Ribonuclease 3 [rnc]. 20 236 29.956 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 ProSitePatterns PS00517 Ribonuclease III family signature. 56 64 - T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 22 238 3.7E-77 T 23-04-2016 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 Pfam PF14622 Ribonuclease-III-like 32 159 1.6E-36 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 SUPERFAMILY SSF54768 161 241 1.16E-20 T 23-04-2016 SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 Pfam PF00035 Double-stranded RNA binding motif 174 239 4.2E-15 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 PANTHER PTHR11207 21 239 3.3E-80 T 23-04-2016 SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 SMART SM00535 32 167 5.2E-52 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 Gene3D G3DSA:1.10.1520.10 22 163 1.8E-44 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 SUPERFAMILY SSF69065 16 175 6.1E-51 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 SMART SM00358 173 240 6.2E-18 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain SHYC_RS08025 985c3c615385617263f57a9a716ec61e 243 Gene3D G3DSA:3.30.160.20 172 239 9.7E-24 T 23-04-2016 IPR014720 Double-stranded RNA-binding domain SHYC_RS01755 d22a2b6cfd203476d3295d077c465588 240 Pfam PF02677 Uncharacterized BCR, COG1636 38 218 3.0E-60 T 23-04-2016 IPR003828 Protein of unknown function DUF208 SHYC_RS01755 d22a2b6cfd203476d3295d077c465588 240 PANTHER PTHR36701 22 236 3.2E-82 T 23-04-2016 SHYC_RS08145 afa376e2137e36ed292211afd850e5e7 405 PANTHER PTHR14359 1 405 2.8E-191 T 23-04-2016 SHYC_RS08145 afa376e2137e36ed292211afd850e5e7 405 SUPERFAMILY SSF52507 2 176 1.83E-61 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 SHYC_RS08145 afa376e2137e36ed292211afd850e5e7 405 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 400 4.8E-143 T 23-04-2016 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|UniPathway: UPA00241|UniPathway: UPA00241 SHYC_RS08145 afa376e2137e36ed292211afd850e5e7 405 Gene3D G3DSA:3.40.50.1950 2 180 6.6E-67 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 SHYC_RS08145 afa376e2137e36ed292211afd850e5e7 405 PANTHER PTHR14359:SF20 1 405 2.8E-191 T 23-04-2016 SHYC_RS08145 afa376e2137e36ed292211afd850e5e7 405 SUPERFAMILY SSF102645 191 401 4.71E-70 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SHYC_RS08145 afa376e2137e36ed292211afd850e5e7 405 Pfam PF02441 Flavoprotein 2 128 1.2E-36 T 23-04-2016 IPR003382 Flavoprotein GO:0003824 SHYC_RS08145 afa376e2137e36ed292211afd850e5e7 405 Gene3D G3DSA:3.40.50.10300 190 402 1.4E-76 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SHYC_RS08145 afa376e2137e36ed292211afd850e5e7 405 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 194 374 1.2E-66 T 23-04-2016 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|UniPathway: UPA00241 SHYC_RS01330 1bc0fbe6b2fb323b405c5bbc900e10d7 252 Pfam PF04507 Protein of unknown function, DUF576 1 230 4.4E-64 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS01330 1bc0fbe6b2fb323b405c5bbc900e10d7 252 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 227 2.3E-57 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS07875 d664cde4d8c668b8a97ba3d79747259e 259 Pfam PF01148 Cytidylyltransferase family 2 256 9.4E-71 T 23-04-2016 SHYC_RS07875 d664cde4d8c668b8a97ba3d79747259e 259 PANTHER PTHR13773 1 257 2.5E-71 T 23-04-2016 SHYC_RS07875 d664cde4d8c668b8a97ba3d79747259e 259 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 217 243 - T 23-04-2016 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00557 SHYC_RS09035 c46203de321b94b90e3d469268e8ee94 245 SUPERFAMILY SSF53474 4 242 5.21E-30 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS09035 c46203de321b94b90e3d469268e8ee94 245 PANTHER PTHR10907:SF58 7 188 6.1E-55 T 23-04-2016 SHYC_RS09035 c46203de321b94b90e3d469268e8ee94 245 Gene3D G3DSA:3.40.50.1820 4 243 2.0E-39 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS09035 c46203de321b94b90e3d469268e8ee94 245 PANTHER PTHR10907 7 188 6.1E-55 T 23-04-2016 SHYC_RS09035 c46203de321b94b90e3d469268e8ee94 245 Pfam PF00756 Putative esterase 17 238 9.2E-45 T 23-04-2016 IPR000801 Putative esterase SHYC_RS11500 74a89abd681a89951f8bc81ad0aa5cd4 422 TIGRFAM TIGR03173 pbuX: xanthine permease 6 410 8.0E-154 T 23-04-2016 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 SHYC_RS11500 74a89abd681a89951f8bc81ad0aa5cd4 422 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 407 1.7E-127 T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SHYC_RS11500 74a89abd681a89951f8bc81ad0aa5cd4 422 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 325 345 - T 23-04-2016 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 SHYC_RS11500 74a89abd681a89951f8bc81ad0aa5cd4 422 Pfam PF00860 Permease family 2 378 2.6E-106 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS11500 74a89abd681a89951f8bc81ad0aa5cd4 422 PANTHER PTHR11119 4 411 2.1E-103 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS08000 712a04b404e6a37a94ab53a3cf41a684 91 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 78 24.03 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS08000 712a04b404e6a37a94ab53a3cf41a684 91 Gene3D G3DSA:3.30.1320.10 2 84 2.2E-33 T 23-04-2016 IPR023803 Ribosomal protein S16 domain SHYC_RS08000 712a04b404e6a37a94ab53a3cf41a684 91 Pfam PF00886 Ribosomal protein S16 9 68 3.8E-24 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS08000 712a04b404e6a37a94ab53a3cf41a684 91 PANTHER PTHR12919 2 84 4.5E-39 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS08000 712a04b404e6a37a94ab53a3cf41a684 91 SUPERFAMILY SSF54565 2 84 2.62E-31 T 23-04-2016 IPR023803 Ribosomal protein S16 domain SHYC_RS08000 712a04b404e6a37a94ab53a3cf41a684 91 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.7E-32 T 23-04-2016 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 Gene3D G3DSA:1.20.1250.20 224 391 1.6E-24 T 23-04-2016 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 Gene3D G3DSA:1.20.1250.20 8 195 1.0E-31 T 23-04-2016 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 PRINTS PR01035 Tetracycline resistance protein signature 139 161 8.4E-10 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 PRINTS PR01035 Tetracycline resistance protein signature 20 36 8.4E-10 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 PRINTS PR01035 Tetracycline resistance protein signature 342 365 8.4E-10 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 PRINTS PR01035 Tetracycline resistance protein signature 82 106 8.4E-10 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 PRINTS PR01035 Tetracycline resistance protein signature 109 130 8.4E-10 T 23-04-2016 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 PANTHER PTHR23504 7 422 6.9E-97 T 23-04-2016 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 Pfam PF07690 Major Facilitator Superfamily 14 243 1.7E-28 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 Pfam PF00083 Sugar (and other) transporter 254 381 8.7E-9 T 23-04-2016 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 PANTHER PTHR23504:SF14 7 422 6.9E-97 T 23-04-2016 SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 SUPERFAMILY SSF103473 8 245 5.1E-37 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS00360 20b97726e514581d7cb2d18dea6b8ebb 422 SUPERFAMILY SSF103473 254 389 1.96E-23 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS09440 140ad8db73415caca2f1a5b0890141eb 413 PANTHER PTHR11601 9 410 6.3E-212 T 23-04-2016 SHYC_RS09440 140ad8db73415caca2f1a5b0890141eb 413 PIRSF PIRSF005572 25 411 4.8E-50 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SHYC_RS09440 140ad8db73415caca2f1a5b0890141eb 413 Pfam PF00266 Aminotransferase class-V 29 398 4.9E-164 T 23-04-2016 IPR000192 Aminotransferase class V domain SHYC_RS09440 140ad8db73415caca2f1a5b0890141eb 413 Gene3D G3DSA:3.40.640.10 39 287 5.7E-88 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS09440 140ad8db73415caca2f1a5b0890141eb 413 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 220 239 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SHYC_RS09440 140ad8db73415caca2f1a5b0890141eb 413 PANTHER PTHR11601:SF17 9 410 6.3E-212 T 23-04-2016 SHYC_RS09440 140ad8db73415caca2f1a5b0890141eb 413 Gene3D G3DSA:3.90.1150.10 288 404 8.5E-32 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS09440 140ad8db73415caca2f1a5b0890141eb 413 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 10 410 1.7E-189 T 23-04-2016 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SHYC_RS09440 140ad8db73415caca2f1a5b0890141eb 413 SUPERFAMILY SSF53383 6 405 1.2E-130 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS03520 1b455743476a9259765884be9d510c54 406 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 32 347 2.9E-63 T 23-04-2016 IPR017439 Amidohydrolase GO:0016787 SHYC_RS03520 1b455743476a9259765884be9d510c54 406 SUPERFAMILY SSF55031 184 289 2.88E-21 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS03520 1b455743476a9259765884be9d510c54 406 Pfam PF01546 Peptidase family M20/M25/M40 98 378 2.2E-6 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS03520 1b455743476a9259765884be9d510c54 406 Gene3D G3DSA:3.30.70.360 185 287 1.1E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS03520 1b455743476a9259765884be9d510c54 406 Gene3D G3DSA:3.40.630.10 294 400 9.1E-63 T 23-04-2016 SHYC_RS03520 1b455743476a9259765884be9d510c54 406 Gene3D G3DSA:3.40.630.10 15 184 9.1E-63 T 23-04-2016 SHYC_RS03520 1b455743476a9259765884be9d510c54 406 PANTHER PTHR30575 8 405 2.9E-154 T 23-04-2016 SHYC_RS03520 1b455743476a9259765884be9d510c54 406 PIRSF PIRSF037226 11 406 7.8E-158 T 23-04-2016 IPR017144 Peptidase M20A, amidohydrolase, predicted SHYC_RS03520 1b455743476a9259765884be9d510c54 406 SUPERFAMILY SSF53187 18 197 5.71E-60 T 23-04-2016 SHYC_RS03520 1b455743476a9259765884be9d510c54 406 SUPERFAMILY SSF53187 297 391 5.71E-60 T 23-04-2016 SHYC_RS03520 1b455743476a9259765884be9d510c54 406 PANTHER PTHR30575:SF0 8 405 2.9E-154 T 23-04-2016 SHYC_RS03520 1b455743476a9259765884be9d510c54 406 Pfam PF07687 Peptidase dimerisation domain 187 278 1.5E-8 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS04020 971cf1471c044148064fcfcf55ee54ae 250 Pfam PF02517 CAAX protease self-immunity 128 219 1.9E-15 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SHYC_RS04020 971cf1471c044148064fcfcf55ee54ae 250 PANTHER PTHR10794 37 250 8.1E-28 T 23-04-2016 SHYC_RS04020 971cf1471c044148064fcfcf55ee54ae 250 PANTHER PTHR10794:SF61 37 250 8.1E-28 T 23-04-2016 SHYC_RS01625 dd61844063419f0bbec56261457bb020 191 PANTHER PTHR21235 2 185 5.2E-61 T 23-04-2016 SHYC_RS01625 dd61844063419f0bbec56261457bb020 191 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 186 31.398 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SHYC_RS01625 dd61844063419f0bbec56261457bb020 191 PANTHER PTHR21235:SF1 2 185 5.2E-61 T 23-04-2016 SHYC_RS01625 dd61844063419f0bbec56261457bb020 191 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 185 5.0E-64 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SHYC_RS01625 dd61844063419f0bbec56261457bb020 191 SUPERFAMILY SSF52317 2 184 3.87E-41 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS01625 dd61844063419f0bbec56261457bb020 191 PIRSF PIRSF000495 1 187 3.7E-61 T 23-04-2016 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 UniPathway: UPA00031 SHYC_RS01625 dd61844063419f0bbec56261457bb020 191 Gene3D G3DSA:3.40.50.880 1 185 1.5E-58 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS01625 dd61844063419f0bbec56261457bb020 191 Pfam PF00117 Glutamine amidotransferase class-I 4 174 3.9E-16 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SHYC_RS11505 47da1babae9a26215b7640ac422dbace 193 PANTHER PTHR11776:SF1 2 188 3.9E-81 T 23-04-2016 SHYC_RS11505 47da1babae9a26215b7640ac422dbace 193 Pfam PF00156 Phosphoribosyl transferase domain 37 157 3.2E-8 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHYC_RS11505 47da1babae9a26215b7640ac422dbace 193 PANTHER PTHR11776 2 188 3.9E-81 T 23-04-2016 SHYC_RS11505 47da1babae9a26215b7640ac422dbace 193 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 2 190 3.2E-89 T 23-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 SHYC_RS11505 47da1babae9a26215b7640ac422dbace 193 Gene3D G3DSA:3.40.50.2020 2 188 6.8E-58 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS11505 47da1babae9a26215b7640ac422dbace 193 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 38.882 T 23-04-2016 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22|UniPathway: UPA00602 SHYC_RS11505 47da1babae9a26215b7640ac422dbace 193 SUPERFAMILY SSF53271 2 186 2.56E-41 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS04000 f4a1aa60752af8529adf14ac769264ff 44 SMART SM00794 1 44 1.3E-15 T 23-04-2016 IPR009229 Staphylococcal AgrD SHYC_RS04000 f4a1aa60752af8529adf14ac769264ff 44 Pfam PF05931 Staphylococcal AgrD protein 1 42 1.2E-18 T 23-04-2016 IPR009229 Staphylococcal AgrD SHYC_RS04000 f4a1aa60752af8529adf14ac769264ff 44 TIGRFAM TIGR04223 quorum_AgrD: cyclic lactone autoinducer peptide 6 41 1.6E-10 T 23-04-2016 IPR009229 Staphylococcal AgrD SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 Gene3D G3DSA:3.40.50.20 1 128 6.9E-51 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 PANTHER PTHR18866 1 442 7.3E-302 T 23-04-2016 SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 Pfam PF02785 Biotin carboxylase C-terminal domain 336 442 1.2E-36 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 SUPERFAMILY SSF56059 82 350 1.85E-72 T 23-04-2016 SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 3.8E-223 T 23-04-2016 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 SMART SM00878 336 442 9.4E-60 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 SUPERFAMILY SSF52440 1 112 4.75E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 SUPERFAMILY SSF51246 331 442 6.8E-43 T 23-04-2016 IPR011054 Rudiment single hybrid motif SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 Gene3D G3DSA:3.30.1490.20 129 201 1.5E-29 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 Gene3D G3DSA:3.30.470.20 202 443 2.3E-102 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.3E-84 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS06740 2256840698686e81c59e720e93209bfb 451 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 109 3.3E-45 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SHYC_RS02455 1d5a868c675fa4291cdd7ac2bab98bee 401 SUPERFAMILY SSF103473 11 384 2.62E-38 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS02455 1d5a868c675fa4291cdd7ac2bab98bee 401 PANTHER PTHR23523 1 401 6.2E-106 T 23-04-2016 SHYC_RS02455 1d5a868c675fa4291cdd7ac2bab98bee 401 PANTHER PTHR23523:SF2 1 401 6.2E-106 T 23-04-2016 SHYC_RS02455 1d5a868c675fa4291cdd7ac2bab98bee 401 Gene3D G3DSA:1.20.1250.20 202 383 3.8E-16 T 23-04-2016 SHYC_RS02455 1d5a868c675fa4291cdd7ac2bab98bee 401 Gene3D G3DSA:1.20.1250.20 12 195 3.2E-12 T 23-04-2016 SHYC_RS03795 3d6b035b3ff476a0b54bd7d177357906 495 SMART SM00490 254 335 6.5E-34 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS03795 3d6b035b3ff476a0b54bd7d177357906 495 Pfam PF00271 Helicase conserved C-terminal domain 226 335 5.3E-30 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS03795 3d6b035b3ff476a0b54bd7d177357906 495 PANTHER PTHR24031:SF145 2 465 2.9E-199 T 23-04-2016 SHYC_RS03795 3d6b035b3ff476a0b54bd7d177357906 495 Pfam PF00270 DEAD/DEAH box helicase 26 192 1.3E-50 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHYC_RS03795 3d6b035b3ff476a0b54bd7d177357906 495 Gene3D G3DSA:3.40.50.300 216 373 7.7E-51 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03795 3d6b035b3ff476a0b54bd7d177357906 495 SMART SM00487 21 218 4.2E-61 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS03795 3d6b035b3ff476a0b54bd7d177357906 495 Gene3D G3DSA:3.40.50.300 2 215 4.6E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03795 3d6b035b3ff476a0b54bd7d177357906 495 SUPERFAMILY SSF52540 69 357 2.18E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03795 3d6b035b3ff476a0b54bd7d177357906 495 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 23-04-2016 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site SHYC_RS03795 3d6b035b3ff476a0b54bd7d177357906 495 PANTHER PTHR24031 2 465 2.9E-199 T 23-04-2016 SHYC_RS00885 f150ae3e105c6d25f0d1aa8aaf196a31 161 SUPERFAMILY SSF55874 7 141 1.22E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00885 f150ae3e105c6d25f0d1aa8aaf196a31 161 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 55 140 3.0E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00885 f150ae3e105c6d25f0d1aa8aaf196a31 161 SMART SM00387 49 157 4.4E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00885 f150ae3e105c6d25f0d1aa8aaf196a31 161 Gene3D G3DSA:3.30.565.10 7 145 1.1E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 PANTHER PTHR30146 1 329 2.4E-128 T 23-04-2016 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 Pfam PF13377 Periplasmic binding protein-like domain 169 328 2.2E-30 T 23-04-2016 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 SUPERFAMILY SSF47413 2 60 5.3E-19 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 PANTHER PTHR30146:SF4 1 329 2.4E-128 T 23-04-2016 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 Gene3D G3DSA:1.10.260.40 3 54 5.0E-27 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 7.5E-21 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 TIGRFAM TIGR01481 ccpA: catabolite control protein A 1 329 1.9E-162 T 23-04-2016 IPR006377 Catabolite control protein A GO:0006355 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.5E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.5E-5 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 Gene3D G3DSA:3.40.50.2300 55 172 8.8E-50 T 23-04-2016 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 SMART SM00354 2 72 2.4E-39 T 23-04-2016 IPR000843 Transcription regulator HTH, LacI GO:0003700|GO:0006355 SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 SUPERFAMILY SSF53822 62 329 4.54E-74 T 23-04-2016 IPR028082 Periplasmic binding protein-like I SHYC_RS05760 04cf3b9ead195cc83c76bcac021a3e22 330 Gene3D G3DSA:3.40.50.2300 173 309 8.2E-39 T 23-04-2016 SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 Gene3D G3DSA:3.40.50.300 407 408 1.8E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 Gene3D G3DSA:3.40.50.300 1069 1177 1.8E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 Gene3D G3DSA:3.40.50.300 3 185 1.8E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 PANTHER PTHR18937 1 750 0.0 T 23-04-2016 SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 PANTHER PTHR18937 766 1186 0.0 T 23-04-2016 SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 SUPERFAMILY SSF75553 485 686 2.88E-51 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 SMART SM00968 518 637 8.8E-37 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 SUPERFAMILY SSF52540 1075 1161 1.11E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 SUPERFAMILY SSF52540 3 220 1.11E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 PIRSF PIRSF005719 1 1182 3.1E-299 T 23-04-2016 IPR024704 Structural maintenance of chromosomes protein SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 PANTHER PTHR18937:SF251 1 750 0.0 T 23-04-2016 SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 PANTHER PTHR18937:SF251 766 1186 0.0 T 23-04-2016 SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 Hamap MF_01894 Chromosome partition protein Smc [smc]. 2 1178 22.61 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 3 1176 0.0 T 23-04-2016 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 Pfam PF06470 SMC proteins Flexible Hinge Domain 518 637 3.4E-29 T 23-04-2016 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 Pfam PF02463 RecF/RecN/SMC N terminal domain 362 1169 1.1E-21 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SHYC_RS08020 e3f3d424e9f6b322e08a0584f821e4e5 1188 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 140 3.0E-39 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SHYC_RS04725 de9f6af1387c9d512b95f0076a377ea0 911 Pfam PF13884 Chaperone of endosialidase 823 878 1.5E-7 T 23-04-2016 IPR030392 Intramolecular chaperone auto-processing domain SHYC_RS05190 df04ed43e88035cc2e83e75bca92c239 277 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 94 107 3.8E-5 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHYC_RS05190 df04ed43e88035cc2e83e75bca92c239 277 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 48 62 3.8E-5 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHYC_RS05190 df04ed43e88035cc2e83e75bca92c239 277 PANTHER PTHR10629 4 103 4.7E-21 T 23-04-2016 SHYC_RS05190 df04ed43e88035cc2e83e75bca92c239 277 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 3 270 8.0E-41 T 23-04-2016 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 SHYC_RS05190 df04ed43e88035cc2e83e75bca92c239 277 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 6 18 - T 23-04-2016 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37 SHYC_RS05190 df04ed43e88035cc2e83e75bca92c239 277 Gene3D G3DSA:3.40.50.150 3 105 2.3E-30 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05190 df04ed43e88035cc2e83e75bca92c239 277 SUPERFAMILY SSF53335 3 275 2.82E-47 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05190 df04ed43e88035cc2e83e75bca92c239 277 Pfam PF00145 C-5 cytosine-specific DNA methylase 2 273 2.5E-44 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05190 df04ed43e88035cc2e83e75bca92c239 277 Gene3D G3DSA:3.90.120.10 106 262 3.4E-15 T 23-04-2016 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 SMART SM00465 18 98 8.7E-24 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 PANTHER PTHR30562:SF1 8 591 3.2E-271 T 23-04-2016 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 Pfam PF14520 Helix-hairpin-helix domain 542 592 4.1E-6 T 23-04-2016 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 SUPERFAMILY SSF47781 506 594 4.13E-21 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 SUPERFAMILY SSF82771 18 100 9.68E-23 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 378 526 7.0E-46 T 23-04-2016 IPR001162 UvrC family homology region SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 PANTHER PTHR30562 8 591 3.2E-271 T 23-04-2016 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 Pfam PF02151 UvrB/uvrC motif 200 233 9.7E-8 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 Gene3D G3DSA:4.10.860.10 178 239 3.6E-17 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 Gene3D G3DSA:1.10.150.20 539 592 5.1E-20 T 23-04-2016 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 Hamap MF_00203 UvrABC system protein C [uvrC]. 5 590 28.636 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 SUPERFAMILY SSF46600 186 238 9.29E-12 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 8 573 1.7E-200 T 23-04-2016 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 Pfam PF01541 GIY-YIG catalytic domain 19 93 1.4E-9 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily SHYC_RS08395 7b9998a0b975ad84a94f5e45ac1e5a92 596 Gene3D G3DSA:3.40.1440.10 18 96 1.6E-10 T 23-04-2016 IPR027299 GIY-YIG domain SHYC_RS03600 3f9322eb74fa5526c354ff24d027bbdd 200 PANTHER PTHR11441 1 199 3.0E-77 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SHYC_RS03600 3f9322eb74fa5526c354ff24d027bbdd 200 SUPERFAMILY SSF57716 142 193 3.42E-15 T 23-04-2016 SHYC_RS03600 3f9322eb74fa5526c354ff24d027bbdd 200 Gene3D G3DSA:3.30.60.20 142 188 5.7E-14 T 23-04-2016 SHYC_RS03600 3f9322eb74fa5526c354ff24d027bbdd 200 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 23-04-2016 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SHYC_RS03600 3f9322eb74fa5526c354ff24d027bbdd 200 Pfam PF00265 Thymidine kinase 8 187 4.9E-56 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SHYC_RS03600 3f9322eb74fa5526c354ff24d027bbdd 200 PIRSF PIRSF035805 5 200 2.0E-62 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SHYC_RS03600 3f9322eb74fa5526c354ff24d027bbdd 200 SUPERFAMILY SSF52540 8 142 6.9E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03600 3f9322eb74fa5526c354ff24d027bbdd 200 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 36.183 T 23-04-2016 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199 SHYC_RS09030 b427228d407df77afcbb45b22f645553 169 Gene3D G3DSA:3.90.1140.10 5 168 4.9E-15 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SHYC_RS09030 b427228d407df77afcbb45b22f645553 169 Pfam PF13563 2'-5' RNA ligase superfamily 14 156 2.4E-20 T 23-04-2016 SHYC_RS09030 b427228d407df77afcbb45b22f645553 169 PANTHER PTHR40037 1 169 4.8E-43 T 23-04-2016 SHYC_RS09030 b427228d407df77afcbb45b22f645553 169 Hamap MF_01444 Putative phosphoesterase . 1 169 36.678 T 23-04-2016 IPR022932 Putative phosphoesterase YjcG SHYC_RS09030 b427228d407df77afcbb45b22f645553 169 PANTHER PTHR40037:SF1 1 169 4.8E-43 T 23-04-2016 SHYC_RS09030 b427228d407df77afcbb45b22f645553 169 SUPERFAMILY SSF55144 1 168 7.32E-27 T 23-04-2016 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase SHYC_RS07790 1d5159ca0e4310c5c818ddfd316ecec0 557 PIRSF PIRSF004803 2 557 8.3E-196 T 23-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SHYC_RS07790 1d5159ca0e4310c5c818ddfd316ecec0 557 SMART SM00849 23 217 7.2E-23 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS07790 1d5159ca0e4310c5c818ddfd316ecec0 557 Gene3D G3DSA:3.60.15.10 7 257 2.2E-64 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS07790 1d5159ca0e4310c5c818ddfd316ecec0 557 Pfam PF00753 Metallo-beta-lactamase superfamily 23 167 1.4E-6 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS07790 1d5159ca0e4310c5c818ddfd316ecec0 557 PANTHER PTHR11203:SF38 2 557 0.0 T 23-04-2016 SHYC_RS07790 1d5159ca0e4310c5c818ddfd316ecec0 557 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 11 554 6.5E-181 T 23-04-2016 IPR004613 Ribonuclease J GO:0003723|GO:0046872 SHYC_RS07790 1d5159ca0e4310c5c818ddfd316ecec0 557 Hamap MF_01491 Ribonuclease J [rnj]. 6 557 42.929 T 23-04-2016 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 SHYC_RS07790 1d5159ca0e4310c5c818ddfd316ecec0 557 PANTHER PTHR11203 2 557 0.0 T 23-04-2016 SHYC_RS07790 1d5159ca0e4310c5c818ddfd316ecec0 557 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 360 411 2.9E-10 T 23-04-2016 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain SHYC_RS07790 1d5159ca0e4310c5c818ddfd316ecec0 557 SUPERFAMILY SSF56281 11 425 9.85E-73 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS09430 7524fc976ddaecbec2a2d28f4b73312a 465 SUPERFAMILY SSF101960 32 462 1.02E-143 T 23-04-2016 SHYC_RS09430 7524fc976ddaecbec2a2d28f4b73312a 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 6.7E-76 T 23-04-2016 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 SHYC_RS09430 7524fc976ddaecbec2a2d28f4b73312a 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 1.4E-233 T 23-04-2016 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 SHYC_RS09430 7524fc976ddaecbec2a2d28f4b73312a 465 PANTHER PTHR30508:SF1 10 465 1.3E-253 T 23-04-2016 SHYC_RS09430 7524fc976ddaecbec2a2d28f4b73312a 465 PANTHER PTHR30508 10 465 1.3E-253 T 23-04-2016 SHYC_RS07010 d90d376249e3e4eb75c372dfb6e10ed2 177 PIRSF PIRSF007165 1 177 7.7E-34 T 23-04-2016 IPR011188 Uncharacterised protein family UPF0302 SHYC_RS07010 d90d376249e3e4eb75c372dfb6e10ed2 177 Pfam PF08864 UPF0302 domain 9 107 1.5E-23 T 23-04-2016 IPR014963 Uncharacterised domain UPF0302, N-terminal SHYC_RS02710 83a9f7619c95a7c3643465d1430940f7 433 Pfam PF03553 Na+/H+ antiporter family 26 214 1.9E-12 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SHYC_RS02710 83a9f7619c95a7c3643465d1430940f7 433 Pfam PF03553 Na+/H+ antiporter family 239 424 5.6E-11 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SHYC_RS02710 83a9f7619c95a7c3643465d1430940f7 433 PANTHER PTHR33451 7 433 8.7E-215 T 23-04-2016 SHYC_RS02710 83a9f7619c95a7c3643465d1430940f7 433 PANTHER PTHR33451:SF5 7 433 8.7E-215 T 23-04-2016 SHYC_RS05370 3a71a8c29cf7e92f9e09535af731f656 404 PANTHER PTHR41253 1 404 4.1E-85 T 23-04-2016 SHYC_RS05370 3a71a8c29cf7e92f9e09535af731f656 404 Pfam PF05975 Bacterial ABC transporter protein EcsB 6 383 1.7E-83 T 23-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 SHYC_RS05370 3a71a8c29cf7e92f9e09535af731f656 404 PIRSF PIRSF037259 2 404 5.2E-79 T 23-04-2016 IPR010288 Bacterial ABC transporter EcsB GO:0016021 SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 SUPERFAMILY SSF50203 41 122 7.14E-13 T 23-04-2016 IPR008992 Enterotoxin GO:0009405 SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 Gene3D G3DSA:3.10.20.120 118 227 9.7E-33 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 47 121 5.2E-13 T 23-04-2016 IPR015282 Staphylococcal superantigen-like OB-fold domain SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01898 Bacterial superantigen superfamily signature 168 182 7.2E-8 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01898 Bacterial superantigen superfamily signature 209 225 7.2E-8 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01898 Bacterial superantigen superfamily signature 155 168 7.2E-8 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01898 Bacterial superantigen superfamily signature 84 110 7.2E-8 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 188 204 1.9E-9 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 11 29 1.9E-9 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 163 185 1.9E-9 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 214 227 1.9E-9 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 SUPERFAMILY SSF54334 136 226 7.07E-23 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 149 204 6.8E-7 T 23-04-2016 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 Gene3D G3DSA:2.40.50.110 55 117 7.1E-12 T 23-04-2016 SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 155 178 - T 23-04-2016 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01800 Staphylococcus aureus exotoxin signature 113 124 2.1E-16 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 2.1E-16 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01800 Staphylococcus aureus exotoxin signature 194 209 2.1E-16 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00470 c0c86675bdc98ff1cc53e631e5e4acad 228 PRINTS PR01800 Staphylococcus aureus exotoxin signature 154 170 2.1E-16 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS03995 5f6ffbe86d016e626192f222dec4d141 432 PANTHER PTHR40448 2 431 5.9E-77 T 23-04-2016 SHYC_RS03995 5f6ffbe86d016e626192f222dec4d141 432 PANTHER PTHR40448:SF1 2 431 5.9E-77 T 23-04-2016 SHYC_RS03995 5f6ffbe86d016e626192f222dec4d141 432 Gene3D G3DSA:1.10.287.130 212 269 7.3E-5 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS03995 5f6ffbe86d016e626192f222dec4d141 432 SUPERFAMILY SSF55874 293 408 2.11E-10 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS03995 5f6ffbe86d016e626192f222dec4d141 432 Gene3D G3DSA:3.30.565.10 298 406 5.1E-9 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS03995 5f6ffbe86d016e626192f222dec4d141 432 Pfam PF14501 GHKL domain 324 427 9.2E-19 T 23-04-2016 IPR032834 Sensor histidine kinase NatK, C-terminal domain SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 PIRSF PIRSF000102 1 314 3.2E-100 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 5 145 8.3E-39 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 Gene3D G3DSA:3.40.50.720 1 145 2.2E-44 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 SUPERFAMILY SSF56327 147 304 1.28E-54 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 3 305 6.4E-131 T 23-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 Gene3D G3DSA:3.90.110.10 148 311 3.9E-59 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 302 1.1E-29 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 Hamap MF_00487 Malate dehydrogenase [mdh]. 4 310 39.951 T 23-04-2016 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 PRINTS PR00086 L-lactate dehydrogenase signature 5 29 4.8E-27 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 PRINTS PR00086 L-lactate dehydrogenase signature 173 186 4.8E-27 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 PRINTS PR00086 L-lactate dehydrogenase signature 31 55 4.8E-27 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 PRINTS PR00086 L-lactate dehydrogenase signature 143 161 4.8E-27 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 PRINTS PR00086 L-lactate dehydrogenase signature 119 139 4.8E-27 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 PANTHER PTHR11540:SF16 1 304 3.5E-122 T 23-04-2016 SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 SUPERFAMILY SSF51735 5 145 3.86E-42 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09995 5dea4a3fe14b0709119abe6dc609828a 315 PANTHER PTHR11540 1 304 3.5E-122 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS03555 346f5c0150cd3af45d87efce8b97240e 176 PANTHER PTHR41322 2 176 6.3E-49 T 23-04-2016 SHYC_RS03555 346f5c0150cd3af45d87efce8b97240e 176 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 16 81 1.1E-9 T 23-04-2016 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 SHYC_RS03555 346f5c0150cd3af45d87efce8b97240e 176 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 13 93 6.3E-32 T 23-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 SHYC_RS03555 346f5c0150cd3af45d87efce8b97240e 176 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 170 14.763 T 23-04-2016 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 SUPERFAMILY SSF51735 1 179 3.29E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05990 c007f589df92a0036822839f039d61de 336 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 7.5E-128 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 158 311 8.6E-64 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 Gene3D G3DSA:3.30.360.10 162 313 2.9E-71 T 23-04-2016 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 Gene3D G3DSA:3.40.50.720 1 161 4.5E-68 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05990 c007f589df92a0036822839f039d61de 336 PANTHER PTHR10836:SF50 1 336 4.9E-202 T 23-04-2016 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 PIRSF PIRSF000149 1 333 7.8E-129 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 SUPERFAMILY SSF55347 153 312 1.22E-66 T 23-04-2016 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 PANTHER PTHR10836 1 336 4.9E-202 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 151 158 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 4.7E-37 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 4.7E-37 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 174 190 4.7E-37 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 147 165 4.7E-37 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 267 282 4.7E-37 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 153 1.9E-55 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS05990 c007f589df92a0036822839f039d61de 336 SMART SM00846 3 153 9.4E-78 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS06550 0a1de87f7109fd7f9031530850d9231f 322 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 288 7.1E-91 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SHYC_RS06550 0a1de87f7109fd7f9031530850d9231f 322 Pfam PF02401 LytB protein 3 286 8.5E-81 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SHYC_RS06550 0a1de87f7109fd7f9031530850d9231f 322 PANTHER PTHR30426 1 315 4.0E-122 T 23-04-2016 SHYC_RS06550 0a1de87f7109fd7f9031530850d9231f 322 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 290 31.73 T 23-04-2016 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 UniPathway: UPA00056|UniPathway: UPA00059 SHYC_RS02235 b010e11850289ae6ea69b7b6cd098b48 200 Gene3D G3DSA:2.40.260.10 60 193 1.5E-36 T 23-04-2016 IPR023365 Sortase domain SHYC_RS02235 b010e11850289ae6ea69b7b6cd098b48 200 PANTHER PTHR33393:SF3 3 199 1.5E-34 T 23-04-2016 SHYC_RS02235 b010e11850289ae6ea69b7b6cd098b48 200 Pfam PF04203 Sortase family 71 197 7.9E-22 T 23-04-2016 IPR005754 Sortase family SHYC_RS02235 b010e11850289ae6ea69b7b6cd098b48 200 SUPERFAMILY SSF63817 57 193 3.53E-34 T 23-04-2016 IPR023365 Sortase domain SHYC_RS02235 b010e11850289ae6ea69b7b6cd098b48 200 PANTHER PTHR33393 3 199 1.5E-34 T 23-04-2016 SHYC_RS02235 b010e11850289ae6ea69b7b6cd098b48 200 TIGRFAM TIGR01076 sortase_fam: sortase 69 198 5.2E-38 T 23-04-2016 IPR005754 Sortase family SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 Gene3D G3DSA:3.40.50.1360 76 214 3.2E-12 T 23-04-2016 SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 Gene3D G3DSA:1.10.10.10 1 59 1.1E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.3E-7 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.3E-7 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 PANTHER PTHR30363:SF4 1 233 2.9E-84 T 23-04-2016 SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 SUPERFAMILY SSF46785 4 60 3.44E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 SMART SM01134 72 230 3.3E-54 T 23-04-2016 SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 7.9E-18 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 SMART SM00420 6 58 2.0E-17 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 Pfam PF00455 DeoR C terminal sensor domain 74 223 9.2E-45 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 SUPERFAMILY SSF100950 74 220 6.49E-30 T 23-04-2016 SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SHYC_RS09960 c79feb07878276ba2456c8394f124704 251 PANTHER PTHR30363 1 233 2.9E-84 T 23-04-2016 SHYC_RS07160 36a46887b073ca65d7024ea4f41ecd94 142 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 5 133 8.3E-60 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SHYC_RS07160 36a46887b073ca65d7024ea4f41ecd94 142 SUPERFAMILY SSF51316 6 139 2.25E-56 T 23-04-2016 IPR011057 Mss4-like SHYC_RS07160 36a46887b073ca65d7024ea4f41ecd94 142 Pfam PF01641 SelR domain 6 124 1.5E-47 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SHYC_RS07160 36a46887b073ca65d7024ea4f41ecd94 142 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 125 35.078 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SHYC_RS07160 36a46887b073ca65d7024ea4f41ecd94 142 Gene3D G3DSA:2.170.150.20 5 140 5.4E-56 T 23-04-2016 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 SHYC_RS07160 36a46887b073ca65d7024ea4f41ecd94 142 PANTHER PTHR10173:SF31 7 142 7.0E-55 T 23-04-2016 SHYC_RS07160 36a46887b073ca65d7024ea4f41ecd94 142 PANTHER PTHR10173 7 142 7.0E-55 T 23-04-2016 IPR028427 Peptide methionine sulfoxide reductase GO:0006979|GO:0016671|GO:0030091 SHYC_RS05325 a8d1d1f837de833128546fcb1616fe8a 395 Gene3D G3DSA:3.60.21.10 1 245 3.8E-47 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS05325 a8d1d1f837de833128546fcb1616fe8a 395 SUPERFAMILY SSF56300 1 274 5.52E-46 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS05325 a8d1d1f837de833128546fcb1616fe8a 395 PIRSF PIRSF033091 1 395 9.9E-133 T 23-04-2016 IPR014576 Predicted phosphoesterase, YhaO type SHYC_RS05325 a8d1d1f837de833128546fcb1616fe8a 395 PANTHER PTHR30337:SF7 1 390 2.5E-95 T 23-04-2016 SHYC_RS05325 a8d1d1f837de833128546fcb1616fe8a 395 Pfam PF00149 Calcineurin-like phosphoesterase 3 198 2.9E-13 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHYC_RS05325 a8d1d1f837de833128546fcb1616fe8a 395 PANTHER PTHR30337 1 390 2.5E-95 T 23-04-2016 SHYC_RS06665 2021a5f50b2df37f1459a3879ec390ac 106 PIRSF PIRSF029928 1 106 4.0E-37 T 23-04-2016 IPR016940 ComG operon protein C GO:0030420 SHYC_RS06665 2021a5f50b2df37f1459a3879ec390ac 106 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 33 1.6E-7 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site SHYC_RS06665 2021a5f50b2df37f1459a3879ec390ac 106 PANTHER PTHR30093 1 77 2.1E-14 T 23-04-2016 SHYC_RS06665 2021a5f50b2df37f1459a3879ec390ac 106 SUPERFAMILY SSF54523 14 77 3.03E-13 T 23-04-2016 SHYC_RS06665 2021a5f50b2df37f1459a3879ec390ac 106 Gene3D G3DSA:3.30.700.10 14 102 4.5E-5 T 23-04-2016 SHYC_RS06665 2021a5f50b2df37f1459a3879ec390ac 106 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 12 32 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site SHYC_RS06665 2021a5f50b2df37f1459a3879ec390ac 106 PRINTS PR00813 Bacterial general secretion pathway protein G signature 13 38 3.1E-9 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SHYC_RS06665 2021a5f50b2df37f1459a3879ec390ac 106 PRINTS PR00813 Bacterial general secretion pathway protein G signature 49 67 3.1E-9 T 23-04-2016 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 SHYC_RS06665 2021a5f50b2df37f1459a3879ec390ac 106 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 9 32 8.4E-8 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 ProSitePatterns PS00761 Signal peptidases I signature 3. 140 153 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 Pfam PF00717 Peptidase S24-like 32 99 2.8E-17 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 PANTHER PTHR12383:SF14 3 180 1.4E-50 T 23-04-2016 SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 8 178 2.9E-50 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 Gene3D G3DSA:2.10.109.10 22 85 4.6E-34 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 Gene3D G3DSA:2.10.109.10 135 182 4.6E-34 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 SUPERFAMILY SSF51306 25 182 2.14E-45 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 PANTHER PTHR12383 3 180 1.4E-50 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 75 87 1.5E-16 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 135 154 1.5E-16 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 25 41 1.5E-16 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS04665 9992d49a2b708bc223d61c75a5f9218c 185 ProSitePatterns PS00501 Signal peptidases I serine active site. 34 41 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 4 323 2.3E-111 T 23-04-2016 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 114 5.6E-28 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 SMART SM00859 3 119 6.2E-26 T 23-04-2016 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 323 33.101 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 SUPERFAMILY SSF55347 125 310 3.27E-67 T 23-04-2016 SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 PIRSF PIRSF000148 1 327 6.9E-111 T 23-04-2016 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|UniPathway: UPA00034|UniPathway: UPA00050|UniPathway: UPA00051 SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 PANTHER PTHR10174 57 324 4.7E-70 T 23-04-2016 SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 PANTHER PTHR10174:SF2 57 324 4.7E-70 T 23-04-2016 SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 Gene3D G3DSA:3.40.50.720 2 137 1.1E-52 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 Gene3D G3DSA:3.30.360.10 138 306 5.5E-68 T 23-04-2016 SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 SUPERFAMILY SSF51735 1 152 8.41E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07300 5799cff58f57e61c5d431a022b62dac9 327 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 135 309 6.0E-47 T 23-04-2016 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400|UniPathway: UPA00068 SHYC_RS04355 67f05058d1a1da8a2e1a72d68445fefd 337 PANTHER PTHR33055 146 333 4.7E-35 T 23-04-2016 SHYC_RS04355 67f05058d1a1da8a2e1a72d68445fefd 337 PANTHER PTHR33055 21 94 4.7E-35 T 23-04-2016 SHYC_RS04355 67f05058d1a1da8a2e1a72d68445fefd 337 Pfam PF01548 Transposase 3 93 1.1E-9 T 23-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SHYC_RS04355 67f05058d1a1da8a2e1a72d68445fefd 337 PANTHER PTHR33055:SF3 146 333 4.7E-35 T 23-04-2016 SHYC_RS04355 67f05058d1a1da8a2e1a72d68445fefd 337 PANTHER PTHR33055:SF3 21 94 4.7E-35 T 23-04-2016 SHYC_RS04355 67f05058d1a1da8a2e1a72d68445fefd 337 Pfam PF02371 Transposase IS116/IS110/IS902 family 205 287 5.5E-23 T 23-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SHYC_RS00740 67f05058d1a1da8a2e1a72d68445fefd 337 PANTHER PTHR33055 146 333 4.7E-35 T 23-04-2016 SHYC_RS00740 67f05058d1a1da8a2e1a72d68445fefd 337 PANTHER PTHR33055 21 94 4.7E-35 T 23-04-2016 SHYC_RS00740 67f05058d1a1da8a2e1a72d68445fefd 337 Pfam PF01548 Transposase 3 93 1.1E-9 T 23-04-2016 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 SHYC_RS00740 67f05058d1a1da8a2e1a72d68445fefd 337 PANTHER PTHR33055:SF3 146 333 4.7E-35 T 23-04-2016 SHYC_RS00740 67f05058d1a1da8a2e1a72d68445fefd 337 PANTHER PTHR33055:SF3 21 94 4.7E-35 T 23-04-2016 SHYC_RS00740 67f05058d1a1da8a2e1a72d68445fefd 337 Pfam PF02371 Transposase IS116/IS110/IS902 family 205 287 5.5E-23 T 23-04-2016 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 SHYC_RS10215 0690d571cd0fd33aa883b1e86d5db88a 408 PANTHER PTHR10590 1 408 4.7E-216 T 23-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS10215 0690d571cd0fd33aa883b1e86d5db88a 408 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 406 2.6E-47 T 23-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS10215 0690d571cd0fd33aa883b1e86d5db88a 408 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 2.5E-15 T 23-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS10215 0690d571cd0fd33aa883b1e86d5db88a 408 PANTHER PTHR10590:SF19 1 408 4.7E-216 T 23-04-2016 SHYC_RS06510 02075f7bbd6121bbdaa9b9a8b6df6ed4 257 PANTHER PTHR33991 1 255 1.1E-46 T 23-04-2016 SHYC_RS06510 02075f7bbd6121bbdaa9b9a8b6df6ed4 257 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 245 2.8E-62 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SHYC_RS06510 02075f7bbd6121bbdaa9b9a8b6df6ed4 257 Gene3D G3DSA:2.40.50.140 2 81 1.2E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06510 02075f7bbd6121bbdaa9b9a8b6df6ed4 257 SUPERFAMILY SSF57863 80 234 2.88E-27 T 23-04-2016 SHYC_RS06510 02075f7bbd6121bbdaa9b9a8b6df6ed4 257 Hamap MF_00201 DNA repair protein RecO [recO]. 1 245 21.059 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SHYC_RS06510 02075f7bbd6121bbdaa9b9a8b6df6ed4 257 Pfam PF11967 Recombination protein O N terminal 1 77 6.3E-16 T 23-04-2016 IPR022572 DNA replication/recombination mediator RecO, N-terminal SHYC_RS06510 02075f7bbd6121bbdaa9b9a8b6df6ed4 257 Pfam PF02565 Recombination protein O C terminal 84 239 1.6E-24 T 23-04-2016 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 SHYC_RS06510 02075f7bbd6121bbdaa9b9a8b6df6ed4 257 ProSitePatterns PS00989 Clathrin adaptor complexes small chain signature. 226 236 - T 23-04-2016 IPR000804 Clathrin adaptor complex, small chain GO:0006886|GO:0016192|GO:0030117 SHYC_RS06510 02075f7bbd6121bbdaa9b9a8b6df6ed4 257 SUPERFAMILY SSF50249 2 76 2.57E-11 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS08240 ba94fd51fb32e4f706f1e213bebb5e8e 204 Pfam PF05103 DivIVA protein 4 133 4.6E-33 T 23-04-2016 IPR007793 DivIVA family SHYC_RS08240 ba94fd51fb32e4f706f1e213bebb5e8e 204 PANTHER PTHR35794:SF2 1 178 9.3E-60 T 23-04-2016 SHYC_RS08240 ba94fd51fb32e4f706f1e213bebb5e8e 204 PANTHER PTHR35794 1 178 9.3E-60 T 23-04-2016 SHYC_RS08240 ba94fd51fb32e4f706f1e213bebb5e8e 204 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 35 7.8E-7 T 23-04-2016 IPR019933 DivIVA domain SHYC_RS03730 1beacca8c3de2e381e0e582bf12d913a 268 PANTHER PTHR20858 1 259 2.5E-102 T 23-04-2016 SHYC_RS03730 1beacca8c3de2e381e0e582bf12d913a 268 Pfam PF08543 Phosphomethylpyrimidine kinase 14 257 2.6E-88 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SHYC_RS03730 1beacca8c3de2e381e0e582bf12d913a 268 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 259 1.2E-89 T 23-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHYC_RS03730 1beacca8c3de2e381e0e582bf12d913a 268 PANTHER PTHR20858:SF17 1 259 2.5E-102 T 23-04-2016 SHYC_RS03730 1beacca8c3de2e381e0e582bf12d913a 268 Gene3D G3DSA:3.40.1190.20 6 260 1.9E-91 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS03730 1beacca8c3de2e381e0e582bf12d913a 268 SUPERFAMILY SSF53613 5 263 2.81E-74 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS07310 dcd3b33ebd37ef24b68801713553d91d 302 PANTHER PTHR37296 6 293 6.9E-103 T 23-04-2016 SHYC_RS07310 dcd3b33ebd37ef24b68801713553d91d 302 PIRSF PIRSF012524 5 291 1.4E-103 T 23-04-2016 IPR014464 Conserved virulence factor B SHYC_RS07310 dcd3b33ebd37ef24b68801713553d91d 302 Gene3D G3DSA:1.10.10.10 251 295 3.5E-4 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 308 1.1E-105 T 23-04-2016 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 740 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 414 736 7.9E-138 T 23-04-2016 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 Gene3D G3DSA:3.20.20.210 4 376 1.5E-113 T 23-04-2016 SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 PANTHER PTHR30519:SF0 1 746 0.0 T 23-04-2016 SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 741 32.471 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 Gene3D G3DSA:3.20.20.210 377 740 3.8E-117 T 23-04-2016 SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 SUPERFAMILY SSF51726 383 740 1.23E-105 T 23-04-2016 SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 SUPERFAMILY SSF51726 5 365 1.96E-88 T 23-04-2016 SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 PANTHER PTHR30519 1 746 0.0 T 23-04-2016 SHYC_RS11645 88bc065b0b0a1cdefcd9c0ce43af957f 747 PIRSF PIRSF000382 2 745 0.0 T 23-04-2016 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702|UniPathway: UPA00051 SHYC_RS05595 bc87978bc40b78011af2237f7be0402d 209 PANTHER PTHR21098 1 189 1.1E-92 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05595 bc87978bc40b78011af2237f7be0402d 209 Pfam PF00677 Lumazine binding domain 3 86 1.5E-21 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05595 bc87978bc40b78011af2237f7be0402d 209 Pfam PF00677 Lumazine binding domain 99 183 1.3E-18 T 23-04-2016 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05595 bc87978bc40b78011af2237f7be0402d 209 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 192 8.8E-66 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05595 bc87978bc40b78011af2237f7be0402d 209 SUPERFAMILY SSF63380 92 192 2.04E-28 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SHYC_RS05595 bc87978bc40b78011af2237f7be0402d 209 SUPERFAMILY SSF63380 1 89 3.74E-26 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SHYC_RS05595 bc87978bc40b78011af2237f7be0402d 209 Gene3D G3DSA:2.40.30.20 5 103 2.5E-32 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS05595 bc87978bc40b78011af2237f7be0402d 209 Gene3D G3DSA:2.40.30.20 104 193 3.9E-26 T 23-04-2016 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS05595 bc87978bc40b78011af2237f7be0402d 209 PIRSF PIRSF000498 1 205 2.2E-69 T 23-04-2016 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05075 babf61e5878d5645e4b592b43ffc2799 419 Pfam PF00817 impB/mucB/samB family 15 165 1.7E-30 T 23-04-2016 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05075 babf61e5878d5645e4b592b43ffc2799 419 SUPERFAMILY SSF100879 259 356 6.47E-8 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05075 babf61e5878d5645e4b592b43ffc2799 419 Pfam PF11798 IMS family HHH motif 181 213 3.4E-7 T 23-04-2016 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05075 babf61e5878d5645e4b592b43ffc2799 419 Gene3D G3DSA:3.30.1490.100 263 368 2.2E-8 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05075 babf61e5878d5645e4b592b43ffc2799 419 PANTHER PTHR11076:SF31 1 368 1.1E-148 T 23-04-2016 SHYC_RS05075 babf61e5878d5645e4b592b43ffc2799 419 PANTHER PTHR11076 1 368 1.1E-148 T 23-04-2016 SHYC_RS05075 babf61e5878d5645e4b592b43ffc2799 419 Gene3D G3DSA:3.30.70.270 77 169 1.1E-18 T 23-04-2016 SHYC_RS05075 babf61e5878d5645e4b592b43ffc2799 419 SUPERFAMILY SSF56672 10 249 4.27E-50 T 23-04-2016 SHYC_RS05075 babf61e5878d5645e4b592b43ffc2799 419 Gene3D G3DSA:1.10.150.20 179 251 8.2E-21 T 23-04-2016 SHYC_RS05075 babf61e5878d5645e4b592b43ffc2799 419 Pfam PF11799 impB/mucB/samB family C-terminal domain 258 363 1.0E-9 T 23-04-2016 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS03720 f3a6cbdf82cfc27c118b33c26b95e22c 246 SUPERFAMILY SSF54106 37 79 3.27E-11 T 23-04-2016 IPR018392 LysM domain SHYC_RS03720 f3a6cbdf82cfc27c118b33c26b95e22c 246 SUPERFAMILY SSF53955 177 211 4.5E-5 T 23-04-2016 IPR023346 Lysozyme-like domain SHYC_RS03720 f3a6cbdf82cfc27c118b33c26b95e22c 246 Pfam PF01476 LysM domain 39 79 9.7E-11 T 23-04-2016 IPR018392 LysM domain SHYC_RS03720 f3a6cbdf82cfc27c118b33c26b95e22c 246 SMART SM00257 37 80 1.8E-12 T 23-04-2016 IPR018392 LysM domain SHYC_RS03720 f3a6cbdf82cfc27c118b33c26b95e22c 246 Gene3D G3DSA:3.10.350.10 37 80 3.7E-16 T 23-04-2016 IPR018392 LysM domain SHYC_RS03720 f3a6cbdf82cfc27c118b33c26b95e22c 246 Gene3D G3DSA:1.10.530.10 177 213 1.4E-4 T 23-04-2016 SHYC_RS03540 bb1a2f437c4eeec112984218ce8608a2 122 Gene3D G3DSA:3.10.180.10 9 118 5.1E-25 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS03540 bb1a2f437c4eeec112984218ce8608a2 122 PANTHER PTHR33990 1 118 2.7E-17 T 23-04-2016 SHYC_RS03540 bb1a2f437c4eeec112984218ce8608a2 122 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 10 114 2.8E-5 T 23-04-2016 IPR028973 3-demethylubiquinone-9 3-methyltransferase SHYC_RS03540 bb1a2f437c4eeec112984218ce8608a2 122 PANTHER PTHR33990:SF1 1 118 2.7E-17 T 23-04-2016 SHYC_RS03540 bb1a2f437c4eeec112984218ce8608a2 122 SUPERFAMILY SSF54593 1 120 1.93E-23 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 PIRSF PIRSF001587 8 728 1.4E-298 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 SUPERFAMILY SSF56042 568 725 1.05E-20 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 Gene3D G3DSA:3.30.1330.10 55 199 1.4E-48 T 23-04-2016 IPR016188 PurM-like, N-terminal domain SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 Gene3D G3DSA:3.30.1330.10 413 561 1.6E-54 T 23-04-2016 IPR016188 PurM-like, N-terminal domain SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 PANTHER PTHR10099 6 729 0.0 T 23-04-2016 SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 360 2.7E-32 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 Pfam PF02769 AIR synthase related protein, C-terminal domain 569 679 1.6E-6 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 PANTHER PTHR10099:SF2 6 729 0.0 T 23-04-2016 SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 729 284.976 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 725 1.4E-294 T 23-04-2016 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 Pfam PF00586 AIR synthase related protein, N-terminal domain 91 194 1.4E-21 T 23-04-2016 IPR016188 PurM-like, N-terminal domain SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 Pfam PF00586 AIR synthase related protein, N-terminal domain 452 557 1.1E-21 T 23-04-2016 IPR016188 PurM-like, N-terminal domain SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 SUPERFAMILY SSF56042 204 425 1.12E-52 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 SUPERFAMILY SSF55326 18 200 1.23E-48 T 23-04-2016 SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 Gene3D G3DSA:3.90.650.10 254 360 2.4E-4 T 23-04-2016 IPR010918 AIR synthase-related protein, C-terminal domain SHYC_RS08735 0ecbfe25af7db342e387d0e0c9c9bc20 729 SUPERFAMILY SSF55326 389 562 1.7E-52 T 23-04-2016 SHYC_RS08995 0eacf37256a93711ee0b6d9e2f2caf98 266 PANTHER PTHR30238:SF4 166 266 2.5E-131 T 23-04-2016 SHYC_RS08995 0eacf37256a93711ee0b6d9e2f2caf98 266 Pfam PF03741 Integral membrane protein TerC family 15 217 4.2E-51 T 23-04-2016 IPR005496 Integral membrane protein TerC GO:0016021 SHYC_RS08995 0eacf37256a93711ee0b6d9e2f2caf98 266 Gene3D G3DSA:1.20.1250.20 10 101 7.1E-6 T 23-04-2016 SHYC_RS08995 0eacf37256a93711ee0b6d9e2f2caf98 266 PANTHER PTHR30238 9 150 2.5E-131 T 23-04-2016 SHYC_RS08995 0eacf37256a93711ee0b6d9e2f2caf98 266 SUPERFAMILY SSF103473 10 254 4.05E-9 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS08995 0eacf37256a93711ee0b6d9e2f2caf98 266 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 258 1.1E-90 T 23-04-2016 IPR022493 Integral membrane YkoY SHYC_RS08995 0eacf37256a93711ee0b6d9e2f2caf98 266 PANTHER PTHR30238 166 266 2.5E-131 T 23-04-2016 SHYC_RS08995 0eacf37256a93711ee0b6d9e2f2caf98 266 PANTHER PTHR30238:SF4 9 150 2.5E-131 T 23-04-2016 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 SUPERFAMILY SSF46929 154 198 6.54E-7 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 Pfam PF14520 Helix-hairpin-helix domain 72 129 4.9E-14 T 23-04-2016 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 Pfam PF01330 RuvA N terminal domain 1 62 3.9E-18 T 23-04-2016 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 SMART SM00278 73 92 0.15 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 SMART SM00278 108 127 0.4 T 23-04-2016 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 PANTHER PTHR33796 2 200 4.0E-68 T 23-04-2016 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 2 199 5.3E-50 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 Gene3D G3DSA:2.40.50.140 1 64 8.9E-22 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 Gene3D G3DSA:1.10.8.10 155 198 8.8E-8 T 23-04-2016 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 Pfam PF07499 RuvA, C-terminal domain 154 198 3.0E-8 T 23-04-2016 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 199 27.943 T 23-04-2016 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 Gene3D G3DSA:1.10.150.20 67 135 2.1E-28 T 23-04-2016 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 SUPERFAMILY SSF47781 66 133 4.95E-20 T 23-04-2016 IPR010994 RuvA domain 2-like Reactome: REACT_216 SHYC_RS06160 9b5ec27eed31517f904ec914b6a43052 200 SUPERFAMILY SSF50249 1 63 8.0E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS04325 1a67818b0579931c8bca05e23daa9bc8 152 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 141 5.4E-36 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHYC_RS04325 1a67818b0579931c8bca05e23daa9bc8 152 SMART SM00226 2 144 9.4E-38 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHYC_RS04325 1a67818b0579931c8bca05e23daa9bc8 152 SUPERFAMILY SSF52788 1 145 1.1E-42 T 23-04-2016 IPR023485 Phosphotyrosine protein phosphatase I superfamily SHYC_RS04325 1a67818b0579931c8bca05e23daa9bc8 152 PANTHER PTHR11717:SF7 4 149 3.3E-40 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SHYC_RS04325 1a67818b0579931c8bca05e23daa9bc8 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 46 62 5.3E-18 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SHYC_RS04325 1a67818b0579931c8bca05e23daa9bc8 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 5.3E-18 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SHYC_RS04325 1a67818b0579931c8bca05e23daa9bc8 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 118 133 5.3E-18 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SHYC_RS04325 1a67818b0579931c8bca05e23daa9bc8 152 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 78 93 5.3E-18 T 23-04-2016 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 SHYC_RS04325 1a67818b0579931c8bca05e23daa9bc8 152 Gene3D G3DSA:3.40.50.270 1 147 4.3E-45 T 23-04-2016 SHYC_RS04325 1a67818b0579931c8bca05e23daa9bc8 152 PANTHER PTHR11717 4 149 3.3E-40 T 23-04-2016 SHYC_RS10475 67f1cd4e7ef840d73e8167ff455124b9 183 PANTHER PTHR13256 11 178 3.0E-31 T 23-04-2016 SHYC_RS10475 67f1cd4e7ef840d73e8167ff455124b9 183 SUPERFAMILY SSF55729 9 176 4.95E-41 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10475 67f1cd4e7ef840d73e8167ff455124b9 183 Pfam PF13302 Acetyltransferase (GNAT) domain 21 152 3.4E-23 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS10475 67f1cd4e7ef840d73e8167ff455124b9 183 Gene3D G3DSA:3.40.630.30 9 177 4.8E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 SUPERFAMILY SSF52317 153 357 6.05E-57 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00097 Anthranilate synthase component II signature 216 225 2.5E-6 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00097 Anthranilate synthase component II signature 243 254 2.5E-6 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00097 Anthranilate synthase component II signature 329 342 2.5E-6 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 Gene3D G3DSA:3.40.50.880 168 356 1.6E-69 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 SUPERFAMILY SSF52021 4 145 9.02E-55 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 174 188 2.4E-36 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 260 277 2.4E-36 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 243 259 2.4E-36 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 285 296 2.4E-36 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 213 227 2.4E-36 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 Pfam PF00117 Glutamine amidotransferase class-I 176 351 1.2E-47 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 358 48.386 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 130 8.0E-50 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 SMART SM01097 3 133 1.0E-78 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 Gene3D G3DSA:3.50.30.20 4 142 2.2E-56 T 23-04-2016 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PANTHER PTHR11405 3 354 1.0E-204 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 6 354 8.1E-145 T 23-04-2016 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|UniPathway: UPA00068|UniPathway: UPA00070 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 216 225 2.2E-11 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 243 254 2.2E-11 T 23-04-2016 SHYC_RS08195 ff62bdfdcce55d26934648b1dbb82971 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 329 342 2.2E-11 T 23-04-2016 SHYC_RS10940 198db41b1d4dc1495b75bae5d62d4fb5 85 SMART SM00363 1 63 5.2E-6 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS10940 198db41b1d4dc1495b75bae5d62d4fb5 85 SUPERFAMILY SSF55174 1 76 1.57E-19 T 23-04-2016 SHYC_RS10940 198db41b1d4dc1495b75bae5d62d4fb5 85 Gene3D G3DSA:3.10.290.10 1 82 2.1E-23 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS10940 198db41b1d4dc1495b75bae5d62d4fb5 85 Pfam PF01479 S4 domain 1 47 3.2E-9 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS10940 198db41b1d4dc1495b75bae5d62d4fb5 85 PIRSF PIRSF038881 1 85 1.3E-34 T 23-04-2016 IPR025490 RNA-binding protein, HP1423 type SHYC_RS06875 b4b659e41015d73b9307f805add7b143 295 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 295 32.656 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD SHYC_RS06875 b4b659e41015d73b9307f805add7b143 295 Gene3D G3DSA:1.10.443.10 110 288 7.1E-60 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS06875 b4b659e41015d73b9307f805add7b143 295 Pfam PF00589 Phage integrase family 111 281 1.0E-52 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS06875 b4b659e41015d73b9307f805add7b143 295 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 295 59.666 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SHYC_RS06875 b4b659e41015d73b9307f805add7b143 295 SUPERFAMILY SSF56349 2 288 1.38E-63 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHYC_RS06875 b4b659e41015d73b9307f805add7b143 295 Gene3D G3DSA:1.10.150.130 1 96 7.4E-28 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal SHYC_RS06875 b4b659e41015d73b9307f805add7b143 295 PANTHER PTHR30349 1 295 2.1E-117 T 23-04-2016 SHYC_RS06875 b4b659e41015d73b9307f805add7b143 295 PANTHER PTHR30349:SF5 1 295 2.1E-117 T 23-04-2016 SHYC_RS06875 b4b659e41015d73b9307f805add7b143 295 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 295 6.7E-119 T 23-04-2016 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 SHYC_RS06875 b4b659e41015d73b9307f805add7b143 295 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 88 6.1E-24 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SHYC_RS00385 a164139c46a0d8982fad6bc2a74e9c24 254 PIRSF PIRSF032543 1 254 8.9E-119 T 23-04-2016 IPR016999 Uncharacterised conserved protein UCP032543, ParB-like nuclease SHYC_RS00385 a164139c46a0d8982fad6bc2a74e9c24 254 Gene3D G3DSA:3.90.1530.10 3 103 2.5E-17 T 23-04-2016 SHYC_RS00385 a164139c46a0d8982fad6bc2a74e9c24 254 SMART SM00470 9 92 0.0048 T 23-04-2016 IPR003115 ParB/Sulfiredoxin SHYC_RS00385 a164139c46a0d8982fad6bc2a74e9c24 254 SUPERFAMILY SSF110849 7 219 1.2E-34 T 23-04-2016 IPR003115 ParB/Sulfiredoxin SHYC_RS00385 a164139c46a0d8982fad6bc2a74e9c24 254 Pfam PF02195 ParB-like nuclease domain 15 81 9.5E-9 T 23-04-2016 IPR003115 ParB/Sulfiredoxin SHYC_RS07705 d52e2de221c61ca47762dba7f61bc83b 288 SUPERFAMILY SSF52518 12 222 7.16E-77 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07705 d52e2de221c61ca47762dba7f61bc83b 288 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 199 263 2.8E-20 T 23-04-2016 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal SHYC_RS07705 d52e2de221c61ca47762dba7f61bc83b 288 PANTHER PTHR18968:SF40 4 287 7.8E-144 T 23-04-2016 SHYC_RS07705 d52e2de221c61ca47762dba7f61bc83b 288 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 14 273 1.5E-95 T 23-04-2016 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate SHYC_RS07705 d52e2de221c61ca47762dba7f61bc83b 288 Gene3D G3DSA:3.40.50.970 13 221 1.1E-83 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07705 d52e2de221c61ca47762dba7f61bc83b 288 PANTHER PTHR18968 4 287 7.8E-144 T 23-04-2016 SHYC_RS07705 d52e2de221c61ca47762dba7f61bc83b 288 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 48 195 1.3E-31 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHYC_RS11410 1dad49337072f8752c15fcbb44c10d91 304 Pfam PF01497 Periplasmic binding protein 51 277 1.3E-41 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHYC_RS11410 1dad49337072f8752c15fcbb44c10d91 304 PANTHER PTHR30532:SF5 1 302 5.0E-115 T 23-04-2016 SHYC_RS11410 1dad49337072f8752c15fcbb44c10d91 304 Gene3D G3DSA:3.40.50.1980 30 142 3.9E-24 T 23-04-2016 SHYC_RS11410 1dad49337072f8752c15fcbb44c10d91 304 PANTHER PTHR30532 1 302 5.0E-115 T 23-04-2016 SHYC_RS11410 1dad49337072f8752c15fcbb44c10d91 304 SUPERFAMILY SSF53807 32 288 4.91E-45 T 23-04-2016 SHYC_RS11410 1dad49337072f8752c15fcbb44c10d91 304 Gene3D G3DSA:3.40.50.1980 143 291 5.5E-19 T 23-04-2016 SHYC_RS02790 90108435f35868d6cfb099ac8c5e5f93 317 PANTHER PTHR33392:SF5 4 317 2.2E-118 T 23-04-2016 SHYC_RS02790 90108435f35868d6cfb099ac8c5e5f93 317 PANTHER PTHR33392 4 317 2.2E-118 T 23-04-2016 SHYC_RS02790 90108435f35868d6cfb099ac8c5e5f93 317 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 91 236 2.5E-45 T 23-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SHYC_RS02790 90108435f35868d6cfb099ac8c5e5f93 317 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 91 236 1.2E-45 T 23-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SHYC_RS06370 74dbff41373732ca88a119fbaf7d9e89 97 SUPERFAMILY SSF75471 1 94 2.22E-30 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SHYC_RS06370 74dbff41373732ca88a119fbaf7d9e89 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 9.0E-32 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SHYC_RS06370 74dbff41373732ca88a119fbaf7d9e89 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 4.2E-35 T 23-04-2016 IPR017924 RNA-binding protein YhbY GO:0003723 SHYC_RS06370 74dbff41373732ca88a119fbaf7d9e89 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 4.6E-23 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SHYC_RS06370 74dbff41373732ca88a119fbaf7d9e89 97 PANTHER PTHR31846 1 95 7.0E-34 T 23-04-2016 SHYC_RS06370 74dbff41373732ca88a119fbaf7d9e89 97 Gene3D G3DSA:3.30.110.60 1 95 3.1E-32 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SHYC_RS06370 74dbff41373732ca88a119fbaf7d9e89 97 SMART SM01103 3 86 7.2E-41 T 23-04-2016 IPR001890 RNA-binding, CRM domain GO:0003723 SHYC_RS11000 4e245d843fec8a7ffed2f5089103bbcd 88 PIRSF PIRSF037257 1 85 6.1E-36 T 23-04-2016 IPR009366 Protein Veg GO:0042710 SHYC_RS11000 4e245d843fec8a7ffed2f5089103bbcd 88 Pfam PF06257 Biofilm formation stimulator VEG 4 74 6.7E-30 T 23-04-2016 IPR009366 Protein Veg GO:0042710 SHYC_RS11000 4e245d843fec8a7ffed2f5089103bbcd 88 PANTHER PTHR40026 1 86 1.6E-31 T 23-04-2016 SHYC_RS11000 4e245d843fec8a7ffed2f5089103bbcd 88 Gene3D G3DSA:2.30.30.100 1 77 3.7E-32 T 23-04-2016 SHYC_RS11000 4e245d843fec8a7ffed2f5089103bbcd 88 PANTHER PTHR40026:SF1 1 86 1.6E-31 T 23-04-2016 IPR009366 Protein Veg GO:0042710 SHYC_RS10575 036c44fa9f0503c5ccdfdd6f675931df 188 PANTHER PTHR30543:SF1 1 180 6.7E-44 T 23-04-2016 SHYC_RS10575 036c44fa9f0503c5ccdfdd6f675931df 188 Gene3D G3DSA:3.40.50.360 1 180 9.9E-38 T 23-04-2016 IPR029039 Flavoprotein-like domain SHYC_RS10575 036c44fa9f0503c5ccdfdd6f675931df 188 Pfam PF03358 NADPH-dependent FMN reductase 1 141 1.0E-27 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SHYC_RS10575 036c44fa9f0503c5ccdfdd6f675931df 188 SUPERFAMILY SSF52218 1 170 3.38E-33 T 23-04-2016 IPR029039 Flavoprotein-like domain SHYC_RS10575 036c44fa9f0503c5ccdfdd6f675931df 188 PANTHER PTHR30543 1 180 6.7E-44 T 23-04-2016 SHYC_RS08365 69f3555f8ccd6f076e0e627b31fa77da 167 Gene3D G3DSA:3.60.21.10 2 156 1.3E-34 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS08365 69f3555f8ccd6f076e0e627b31fa77da 167 SUPERFAMILY SSF56300 2 161 1.39E-38 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS08365 69f3555f8ccd6f076e0e627b31fa77da 167 PANTHER PTHR11124:SF14 1 156 3.4E-45 T 23-04-2016 SHYC_RS08365 69f3555f8ccd6f076e0e627b31fa77da 167 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 147 1.6E-25 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SHYC_RS08365 69f3555f8ccd6f076e0e627b31fa77da 167 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 145 8.9E-27 T 23-04-2016 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type SHYC_RS08365 69f3555f8ccd6f076e0e627b31fa77da 167 PANTHER PTHR11124 1 156 3.4E-45 T 23-04-2016 IPR000979 Phosphodiesterase MJ0936/Vps29 SHYC_RS02395 5aa3588b4bb9dea9909e634e9868c52f 191 SUPERFAMILY SSF89155 13 178 5.49E-19 T 23-04-2016 IPR020945 DMSO/Nitrate reductase chaperone SHYC_RS02395 5aa3588b4bb9dea9909e634e9868c52f 191 PANTHER PTHR30598 19 189 2.9E-43 T 23-04-2016 SHYC_RS02395 5aa3588b4bb9dea9909e634e9868c52f 191 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 51 136 3.6E-17 T 23-04-2016 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 SHYC_RS02395 5aa3588b4bb9dea9909e634e9868c52f 191 PANTHER PTHR30598:SF1 19 189 2.9E-43 T 23-04-2016 SHYC_RS01875 2f1ad1219b7ec0caf4325c91b6b46e04 180 Pfam PF16729 Domain of unknown function (DUF5067) 29 155 7.2E-10 T 23-04-2016 IPR031989 Domain of unknown function DUF5067 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 SUPERFAMILY SSF51569 61 359 5.4E-97 T 23-04-2016 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 PANTHER PTHR21057:SF7 3 37 1.3E-197 T 23-04-2016 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 PANTHER PTHR21057:SF7 68 360 1.3E-197 T 23-04-2016 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 Pfam PF01817 Chorismate mutase type II 9 86 2.7E-20 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 Pfam PF00793 DAHP synthetase I family 111 355 1.6E-82 T 23-04-2016 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674|UniPathway: UPA00030|UniPathway: UPA00357 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 Gene3D G3DSA:3.20.20.70 95 359 9.2E-94 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 351 3.4E-114 T 23-04-2016 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164|UniPathway: UPA00053 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 PANTHER PTHR21057 3 37 1.3E-197 T 23-04-2016 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 PANTHER PTHR21057 68 360 1.3E-197 T 23-04-2016 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 SMART SM00830 9 88 2.0E-25 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 SUPERFAMILY SSF48600 4 87 3.66E-21 T 23-04-2016 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 101 4.2E-45 T 23-04-2016 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00053|UniPathway: UPA00120 SHYC_RS05755 b4bdb653f29244512f9d2fbddb24453e 363 Gene3D G3DSA:1.20.59.10 2 86 7.2E-22 T 23-04-2016 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00120 SHYC_RS07055 cd33536f441756c722f0b1e1b0d9cd7d 230 PANTHER PTHR41274 1 227 4.4E-48 T 23-04-2016 SHYC_RS07055 cd33536f441756c722f0b1e1b0d9cd7d 230 Pfam PF07261 Replication initiation and membrane attachment 126 196 4.9E-23 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SHYC_RS07055 cd33536f441756c722f0b1e1b0d9cd7d 230 SUPERFAMILY SSF158499 125 191 1.7E-19 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SHYC_RS07055 cd33536f441756c722f0b1e1b0d9cd7d 230 Gene3D G3DSA:1.10.10.630 121 196 5.1E-27 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SHYC_RS07055 cd33536f441756c722f0b1e1b0d9cd7d 230 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 128 196 7.2E-22 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SHYC_RS00925 b86847c25fce8517d325b3803ac3df23 529 Gene3D G3DSA:2.30.38.10 341 417 6.5E-17 T 23-04-2016 SHYC_RS00925 b86847c25fce8517d325b3803ac3df23 529 Gene3D G3DSA:3.30.300.30 418 519 2.2E-30 T 23-04-2016 SHYC_RS00925 b86847c25fce8517d325b3803ac3df23 529 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 23-04-2016 IPR020845 AMP-binding, conserved site SHYC_RS00925 b86847c25fce8517d325b3803ac3df23 529 Gene3D G3DSA:3.40.50.980 21 180 1.7E-37 T 23-04-2016 SHYC_RS00925 b86847c25fce8517d325b3803ac3df23 529 PANTHER PTHR24095:SF194 12 528 3.3E-285 T 23-04-2016 SHYC_RS00925 b86847c25fce8517d325b3803ac3df23 529 SUPERFAMILY SSF56801 21 521 1.05E-140 T 23-04-2016 SHYC_RS00925 b86847c25fce8517d325b3803ac3df23 529 Pfam PF00501 AMP-binding enzyme 22 423 1.1E-83 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHYC_RS00925 b86847c25fce8517d325b3803ac3df23 529 Gene3D G3DSA:3.40.50.980 181 334 1.4E-35 T 23-04-2016 SHYC_RS00925 b86847c25fce8517d325b3803ac3df23 529 PANTHER PTHR24095 12 528 3.3E-285 T 23-04-2016 SHYC_RS00925 b86847c25fce8517d325b3803ac3df23 529 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 510 5.2E-21 T 23-04-2016 IPR025110 AMP-binding enzyme C-terminal domain SHYC_RS05815 2dab7e884a71118264aa60ff30d34bdf 386 SUPERFAMILY SSF53383 4 366 3.72E-84 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS05815 2dab7e884a71118264aa60ff30d34bdf 386 PANTHER PTHR21152 5 386 9.0E-95 T 23-04-2016 SHYC_RS05815 2dab7e884a71118264aa60ff30d34bdf 386 Gene3D G3DSA:3.40.640.10 22 238 2.8E-43 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS05815 2dab7e884a71118264aa60ff30d34bdf 386 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 206 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SHYC_RS05815 2dab7e884a71118264aa60ff30d34bdf 386 Gene3D G3DSA:3.90.1150.10 239 365 1.2E-31 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS05815 2dab7e884a71118264aa60ff30d34bdf 386 PANTHER PTHR21152:SF21 5 386 9.0E-95 T 23-04-2016 SHYC_RS05815 2dab7e884a71118264aa60ff30d34bdf 386 Pfam PF00266 Aminotransferase class-V 28 333 9.1E-39 T 23-04-2016 IPR000192 Aminotransferase class V domain SHYC_RS05815 2dab7e884a71118264aa60ff30d34bdf 386 PIRSF PIRSF000524 2 386 6.3E-111 T 23-04-2016 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 SHYC_RS03085 d835a7ff26163fdc6ca8cc32b913e2eb 117 PANTHER PTHR13501 1 117 1.4E-51 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SHYC_RS03085 d835a7ff26163fdc6ca8cc32b913e2eb 117 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.671 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SHYC_RS03085 d835a7ff26163fdc6ca8cc32b913e2eb 117 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 2.2E-46 T 23-04-2016 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 SHYC_RS03085 d835a7ff26163fdc6ca8cc32b913e2eb 117 Gene3D G3DSA:3.90.470.10 1 112 4.2E-43 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03085 d835a7ff26163fdc6ca8cc32b913e2eb 117 Pfam PF00237 Ribosomal protein L22p/L17e 8 107 1.7E-31 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03085 d835a7ff26163fdc6ca8cc32b913e2eb 117 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 23-04-2016 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03085 d835a7ff26163fdc6ca8cc32b913e2eb 117 SUPERFAMILY SSF54843 1 111 1.7E-43 T 23-04-2016 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 PANTHER PTHR11695 18 334 1.7E-98 T 23-04-2016 IPR002085 Alcohol dehydrogenase superfamily, zinc-type GO:0008270|GO:0016491|GO:0055114 SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 Gene3D G3DSA:3.90.180.10 1 154 3.3E-39 T 23-04-2016 IPR011032 GroES-like SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 SUPERFAMILY SSF51735 115 278 6.33E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 PANTHER PTHR11695:SF558 18 334 1.7E-98 T 23-04-2016 SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 Gene3D G3DSA:3.40.50.720 155 272 1.7E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 SMART SM00829 11 332 1.0E-11 T 23-04-2016 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 149 170 - T 23-04-2016 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 SUPERFAMILY SSF50129 2 141 1.11E-32 T 23-04-2016 IPR011032 GroES-like SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 332 1.4E-90 T 23-04-2016 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 Pfam PF00107 Zinc-binding dehydrogenase 160 255 2.5E-11 T 23-04-2016 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 SHYC_RS03295 68e05bddf1085683efc356bc2b8351c3 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 88 2.5E-9 T 23-04-2016 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 SHYC_RS03625 055f26a1922287a967df2d22b8489065 175 PIRSF PIRSF007510 1 175 2.9E-80 T 23-04-2016 IPR006340 Protein of unknown function DUF436 SHYC_RS03625 055f26a1922287a967df2d22b8489065 175 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 20 173 1.0E-67 T 23-04-2016 IPR006340 Protein of unknown function DUF436 SHYC_RS03625 055f26a1922287a967df2d22b8489065 175 Gene3D G3DSA:3.40.50.10360 2 174 7.5E-78 T 23-04-2016 IPR006340 Protein of unknown function DUF436 SHYC_RS03625 055f26a1922287a967df2d22b8489065 175 SUPERFAMILY SSF110710 2 174 3.92E-72 T 23-04-2016 SHYC_RS03625 055f26a1922287a967df2d22b8489065 175 Hamap MF_00800 UPF0340 protein . 1 175 85.64 T 23-04-2016 IPR006340 Protein of unknown function DUF436 SHYC_RS03625 055f26a1922287a967df2d22b8489065 175 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 2 173 9.9E-83 T 23-04-2016 IPR006340 Protein of unknown function DUF436 SHYC_RS03625 055f26a1922287a967df2d22b8489065 175 Pfam PF04260 Protein of unknown function (DUF436) 4 173 2.5E-73 T 23-04-2016 IPR006340 Protein of unknown function DUF436 SHYC_RS07915 92a2ea22a7df1cede15dc11620bc00f7 180 PANTHER PTHR32194 5 180 4.4E-121 T 23-04-2016 SHYC_RS07915 92a2ea22a7df1cede15dc11620bc00f7 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 7 180 40.915 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SHYC_RS07915 92a2ea22a7df1cede15dc11620bc00f7 180 Gene3D G3DSA:3.60.20.10 8 180 1.3E-77 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHYC_RS07915 92a2ea22a7df1cede15dc11620bc00f7 180 SUPERFAMILY SSF56235 5 179 4.48E-59 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHYC_RS07915 92a2ea22a7df1cede15dc11620bc00f7 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 8 180 4.9E-84 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SHYC_RS07915 92a2ea22a7df1cede15dc11620bc00f7 180 Pfam PF00227 Proteasome subunit 6 178 3.5E-27 T 23-04-2016 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: REACT_11045|Reactome: REACT_13|Reactome: REACT_13635|Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_383|Reactome: REACT_578|Reactome: REACT_6185|Reactome: REACT_6850 SHYC_RS07915 92a2ea22a7df1cede15dc11620bc00f7 180 PIRSF PIRSF039093 1 180 1.8E-86 T 23-04-2016 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 SHYC_RS09280 6cb0f461b65ff46a8e1995cee44359ba 142 PANTHER PTHR33932 2 142 1.5E-35 T 23-04-2016 SHYC_RS09280 6cb0f461b65ff46a8e1995cee44359ba 142 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 11 133 2.0E-29 T 23-04-2016 IPR007182 Na+/H+ antiporter MnhB subunit-related protein SHYC_RS09280 6cb0f461b65ff46a8e1995cee44359ba 142 PANTHER PTHR33932:SF4 2 142 1.5E-35 T 23-04-2016 SHYC_RS07025 1ea5739e941e7422c8b8f4297440346f 106 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 24 103 9.0E-22 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SHYC_RS07025 1ea5739e941e7422c8b8f4297440346f 106 SUPERFAMILY SSF101386 4 103 5.72E-26 T 23-04-2016 SHYC_RS07025 1ea5739e941e7422c8b8f4297440346f 106 PIRSF PIRSF029904 1 106 4.4E-51 T 23-04-2016 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD SHYC_RS07025 1ea5739e941e7422c8b8f4297440346f 106 PANTHER PTHR14552:SF13 1 106 2.7E-38 T 23-04-2016 SHYC_RS07025 1ea5739e941e7422c8b8f4297440346f 106 Gene3D G3DSA:1.10.287.1080 4 94 1.5E-16 T 23-04-2016 SHYC_RS07025 1ea5739e941e7422c8b8f4297440346f 106 PANTHER PTHR14552 1 106 2.7E-38 T 23-04-2016 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 PANTHER PTHR10520 1 414 5.6E-201 T 23-04-2016 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 102 290 5.1E-67 T 23-04-2016 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 SUPERFAMILY SSF51246 322 413 1.02E-23 T 23-04-2016 IPR011054 Rudiment single hybrid motif SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 324 411 8.0E-23 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 SUPERFAMILY SSF56059 103 317 3.54E-53 T 23-04-2016 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 413 38.199 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 Gene3D G3DSA:3.30.470.20 185 318 1.4E-51 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 SUPERFAMILY SSF52440 1 102 3.88E-32 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 Gene3D G3DSA:3.90.600.10 323 413 4.9E-26 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 SMART SM01209 102 290 1.6E-108 T 23-04-2016 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 SMART SM01210 322 413 8.0E-34 T 23-04-2016 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 101 7.2E-32 T 23-04-2016 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 284 291 - T 23-04-2016 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 Gene3D G3DSA:3.40.50.20 2 94 4.0E-32 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 413 1.1E-141 T 23-04-2016 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08710 8ac56ec3f30b13e612d1f97ac34ee0a9 414 Gene3D G3DSA:3.30.1490.20 120 184 3.5E-18 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 8.3E-46 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 23-04-2016 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 SMART SM01002 148 297 8.2E-91 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 Gene3D G3DSA:3.50.50.60 175 198 1.6E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 PIRSF PIRSF000183 1 371 1.3E-199 T 23-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 SUPERFAMILY SSF52283 1 136 1.62E-67 T 23-04-2016 SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 SUPERFAMILY SSF52283 305 361 1.62E-67 T 23-04-2016 SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 SUPERFAMILY SSF51735 136 303 2.95E-49 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.3E-173 T 23-04-2016 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|UniPathway: UPA00527 SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.0E-84 T 23-04-2016 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 PANTHER PTHR10160 1 371 8.2E-218 T 23-04-2016 SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 SMART SM01003 4 136 2.0E-75 T 23-04-2016 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 23-04-2016 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 Gene3D G3DSA:3.40.50.1770 1 174 2.3E-58 T 23-04-2016 SHYC_RS05895 34323687976d9057fcf0dfed0f790bef 371 Gene3D G3DSA:3.40.50.1770 199 358 6.6E-30 T 23-04-2016 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 Gene3D G3DSA:3.40.50.1170 1 204 1.0E-63 T 23-04-2016 IPR027474 L-asparaginase, N-terminal SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 PANTHER PTHR11707 1 320 6.4E-61 T 23-04-2016 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 23-04-2016 IPR027475 Asparaginase/glutaminase, active site 2 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 2.3E-15 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 PRINTS PR00139 Asparaginase/glutaminase family signature 250 268 2.3E-15 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 2.3E-15 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 PIRSF PIRSF001220 1 320 3.0E-93 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 SMART SM00870 3 315 3.1E-137 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 23-04-2016 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 PIRSF PIRSF500176 1 320 4.2E-94 T 23-04-2016 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 SUPERFAMILY SSF53774 1 319 5.63E-98 T 23-04-2016 IPR006034 Asparaginase/glutaminase GO:0006520 SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 Gene3D G3DSA:3.40.50.40 205 319 1.9E-32 T 23-04-2016 IPR027473 L-asparaginase, C-terminal domain SHYC_RS06940 662ad57b1c9c57a6784c71ca498ecb5e 320 Pfam PF00710 Asparaginase, N-terminal 4 188 2.8E-59 T 23-04-2016 IPR027474 L-asparaginase, N-terminal SHYC_RS09990 3eab8d3546ac7fc14e4eebf915b11ce5 239 Pfam PF02517 CAAX protease self-immunity 135 228 9.8E-16 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SHYC_RS09990 3eab8d3546ac7fc14e4eebf915b11ce5 239 PANTHER PTHR36435 8 239 5.7E-19 T 23-04-2016 SHYC_RS09990 3eab8d3546ac7fc14e4eebf915b11ce5 239 PANTHER PTHR36435:SF1 8 239 5.7E-19 T 23-04-2016 SHYC_RS00320 0beab4b7d4f4e14a3bb802115d6fbd0e 193 Pfam PF02669 K+-transporting ATPase, c chain 4 188 3.2E-54 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHYC_RS00320 0beab4b7d4f4e14a3bb802115d6fbd0e 193 PIRSF PIRSF001296 1 193 1.2E-57 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHYC_RS00320 0beab4b7d4f4e14a3bb802115d6fbd0e 193 PANTHER PTHR30042:SF2 1 185 3.3E-56 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHYC_RS00320 0beab4b7d4f4e14a3bb802115d6fbd0e 193 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 190 25.156 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHYC_RS00320 0beab4b7d4f4e14a3bb802115d6fbd0e 193 PANTHER PTHR30042 1 185 3.3E-56 T 23-04-2016 SHYC_RS00320 0beab4b7d4f4e14a3bb802115d6fbd0e 193 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 186 2.8E-46 T 23-04-2016 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 SHYC_RS10250 1fce66c13c09441339d5a835d529748d 363 PANTHER PTHR37316:SF1 1 363 1.5E-68 T 23-04-2016 SHYC_RS10250 1fce66c13c09441339d5a835d529748d 363 SUPERFAMILY SSF53756 41 299 6.59E-12 T 23-04-2016 SHYC_RS10250 1fce66c13c09441339d5a835d529748d 363 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 54 331 1.7E-38 T 23-04-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 SHYC_RS10250 1fce66c13c09441339d5a835d529748d 363 PANTHER PTHR37316 1 363 1.5E-68 T 23-04-2016 SHYC_RS06075 bf37c8657f10c4fd0689deb3c3867cf5 226 Gene3D G3DSA:3.40.50.10090 130 222 1.5E-16 T 23-04-2016 SHYC_RS06075 bf37c8657f10c4fd0689deb3c3867cf5 226 Pfam PF02602 Uroporphyrinogen-III synthase HemD 22 216 3.9E-36 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS06075 bf37c8657f10c4fd0689deb3c3867cf5 226 Gene3D G3DSA:3.40.50.10090 40 129 4.8E-14 T 23-04-2016 SHYC_RS06075 bf37c8657f10c4fd0689deb3c3867cf5 226 SUPERFAMILY SSF69618 14 222 4.45E-42 T 23-04-2016 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|UniPathway: UPA00251 SHYC_RS10775 0a603770575186e4171b04f8a644aff6 401 Pfam PF07670 Nucleoside recognition 91 189 1.6E-5 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS10775 0a603770575186e4171b04f8a644aff6 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 400 5.0E-62 T 23-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS10775 0a603770575186e4171b04f8a644aff6 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.9E-21 T 23-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS10775 0a603770575186e4171b04f8a644aff6 401 PANTHER PTHR10590 3 401 1.2E-230 T 23-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS10775 0a603770575186e4171b04f8a644aff6 401 PANTHER PTHR10590:SF13 3 401 1.2E-230 T 23-04-2016 SHYC_RS02375 5eab9e1ddad9b2d171c1af7f199e3f53 317 SUPERFAMILY SSF53790 7 241 4.19E-59 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SHYC_RS02375 5eab9e1ddad9b2d171c1af7f199e3f53 317 PANTHER PTHR21091:SF16 8 223 2.5E-54 T 23-04-2016 SHYC_RS02375 5eab9e1ddad9b2d171c1af7f199e3f53 317 Gene3D G3DSA:3.30.950.10 123 240 3.7E-28 T 23-04-2016 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 SHYC_RS02375 5eab9e1ddad9b2d171c1af7f199e3f53 317 PANTHER PTHR21091 8 223 2.5E-54 T 23-04-2016 SHYC_RS02375 5eab9e1ddad9b2d171c1af7f199e3f53 317 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 8 240 8.3E-78 T 23-04-2016 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SHYC_RS02375 5eab9e1ddad9b2d171c1af7f199e3f53 317 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 87 120 - T 23-04-2016 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SHYC_RS02375 5eab9e1ddad9b2d171c1af7f199e3f53 317 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 9 216 1.5E-41 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SHYC_RS02375 5eab9e1ddad9b2d171c1af7f199e3f53 317 Gene3D G3DSA:3.40.1010.10 8 122 7.4E-37 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SHYC_RS00235 c59a165a393853c40538230cc9170520 399 Pfam PF01420 Type I restriction modification DNA specificity domain 192 337 5.4E-12 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SHYC_RS00235 c59a165a393853c40538230cc9170520 399 Pfam PF01420 Type I restriction modification DNA specificity domain 2 153 2.2E-27 T 23-04-2016 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 SHYC_RS00235 c59a165a393853c40538230cc9170520 399 PANTHER PTHR30408 19 200 2.9E-14 T 23-04-2016 SHYC_RS00235 c59a165a393853c40538230cc9170520 399 SUPERFAMILY SSF116734 2 167 1.08E-36 T 23-04-2016 SHYC_RS00235 c59a165a393853c40538230cc9170520 399 SUPERFAMILY SSF116734 185 388 1.37E-34 T 23-04-2016 SHYC_RS00775 d1682913f9d13e08a24bb41bfe8f4aaa 202 PANTHER PTHR10108 1 157 4.8E-31 T 23-04-2016 SHYC_RS00775 d1682913f9d13e08a24bb41bfe8f4aaa 202 Gene3D G3DSA:3.40.50.150 2 171 6.0E-16 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS00775 d1682913f9d13e08a24bb41bfe8f4aaa 202 Pfam PF13649 Methyltransferase domain 41 130 2.7E-7 T 23-04-2016 SHYC_RS00775 d1682913f9d13e08a24bb41bfe8f4aaa 202 PANTHER PTHR10108:SF838 1 157 4.8E-31 T 23-04-2016 SHYC_RS00775 d1682913f9d13e08a24bb41bfe8f4aaa 202 SUPERFAMILY SSF53335 2 182 3.68E-19 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS01380 743957cabe5dd64bf1b08b91fe520e3c 263 Gene3D G3DSA:3.30.2140.10 6 85 3.8E-40 T 23-04-2016 SHYC_RS01380 743957cabe5dd64bf1b08b91fe520e3c 263 Gene3D G3DSA:3.30.2140.10 187 257 3.8E-40 T 23-04-2016 SHYC_RS01380 743957cabe5dd64bf1b08b91fe520e3c 263 PANTHER PTHR11786 1 257 8.7E-60 T 23-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SHYC_RS01380 743957cabe5dd64bf1b08b91fe520e3c 263 PANTHER PTHR11786:SF0 1 257 8.7E-60 T 23-04-2016 SHYC_RS01380 743957cabe5dd64bf1b08b91fe520e3c 263 SUPERFAMILY SSF54001 2 262 9.57E-64 T 23-04-2016 SHYC_RS01380 743957cabe5dd64bf1b08b91fe520e3c 263 Pfam PF00797 N-acetyltransferase 23 257 1.3E-62 T 23-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SHYC_RS01380 743957cabe5dd64bf1b08b91fe520e3c 263 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 2.9E-10 T 23-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SHYC_RS01380 743957cabe5dd64bf1b08b91fe520e3c 263 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 2.9E-10 T 23-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SHYC_RS01380 743957cabe5dd64bf1b08b91fe520e3c 263 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 2.9E-10 T 23-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SHYC_RS01380 743957cabe5dd64bf1b08b91fe520e3c 263 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 2.9E-10 T 23-04-2016 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: REACT_13433 SHYC_RS04960 a9417be35f4c9638b07fb3d7393e782d 584 SUPERFAMILY SSF64182 40 318 4.19E-45 T 23-04-2016 SHYC_RS04960 a9417be35f4c9638b07fb3d7393e782d 584 SUPERFAMILY SSF64182 345 439 4.19E-45 T 23-04-2016 SHYC_RS04960 a9417be35f4c9638b07fb3d7393e782d 584 PANTHER PTHR30255 11 583 1.4E-49 T 23-04-2016 SHYC_RS04960 a9417be35f4c9638b07fb3d7393e782d 584 Pfam PF01368 DHH family 68 168 6.7E-6 T 23-04-2016 IPR001667 DDH domain SHYC_RS01825 1a710b034dbd98d777c50516bbbbe53e 378 SUPERFAMILY SSF56601 60 356 6.15E-63 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SHYC_RS01825 1a710b034dbd98d777c50516bbbbe53e 378 PANTHER PTHR22935 28 360 9.1E-61 T 23-04-2016 SHYC_RS01825 1a710b034dbd98d777c50516bbbbe53e 378 PANTHER PTHR22935:SF1 28 360 9.1E-61 T 23-04-2016 SHYC_RS01825 1a710b034dbd98d777c50516bbbbe53e 378 Gene3D G3DSA:3.40.710.10 63 357 2.2E-50 T 23-04-2016 IPR012338 Beta-lactamase/transpeptidase-like SHYC_RS01825 1a710b034dbd98d777c50516bbbbe53e 378 Pfam PF00144 Beta-lactamase 73 353 4.8E-46 T 23-04-2016 IPR001466 Beta-lactamase-related SHYC_RS11060 eb69e7a5c1e01cc918aa79459d2d1d24 204 PANTHER PTHR10344 3 202 2.5E-64 T 23-04-2016 SHYC_RS11060 eb69e7a5c1e01cc918aa79459d2d1d24 204 ProSitePatterns PS01331 Thymidylate kinase signature. 89 101 - T 23-04-2016 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SHYC_RS11060 eb69e7a5c1e01cc918aa79459d2d1d24 204 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 194 1.5E-55 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SHYC_RS11060 eb69e7a5c1e01cc918aa79459d2d1d24 204 Hamap MF_00165 Thymidylate kinase [tmk]. 3 202 30.45 T 23-04-2016 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 SHYC_RS11060 eb69e7a5c1e01cc918aa79459d2d1d24 204 Gene3D G3DSA:3.40.50.300 3 202 8.9E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11060 eb69e7a5c1e01cc918aa79459d2d1d24 204 SUPERFAMILY SSF52540 1 201 1.39E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11060 eb69e7a5c1e01cc918aa79459d2d1d24 204 Pfam PF02223 Thymidylate kinase 7 194 7.2E-53 T 23-04-2016 SHYC_RS09015 723e9c13650be6bfdd3ac21031588d5a 391 PANTHER PTHR21015 1 382 3.5E-136 T 23-04-2016 SHYC_RS09015 723e9c13650be6bfdd3ac21031588d5a 391 SUPERFAMILY SSF53756 6 369 2.16E-39 T 23-04-2016 SHYC_RS09015 723e9c13650be6bfdd3ac21031588d5a 391 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 19 179 3.7E-40 T 23-04-2016 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 SHYC_RS09015 723e9c13650be6bfdd3ac21031588d5a 391 PANTHER PTHR21015:SF21 1 382 3.5E-136 T 23-04-2016 SHYC_RS09015 723e9c13650be6bfdd3ac21031588d5a 391 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 218 322 6.1E-11 T 23-04-2016 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS09015 723e9c13650be6bfdd3ac21031588d5a 391 Gene3D G3DSA:3.40.50.2000 172 349 3.8E-26 T 23-04-2016 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 Gene3D G3DSA:1.10.40.30 357 429 8.5E-35 T 23-04-2016 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 Pfam PF00206 Lyase 7 286 7.6E-73 T 23-04-2016 IPR022761 Fumarate lyase, N-terminal SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 2.9E-175 T 23-04-2016 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 PANTHER PTHR11444:SF2 3 424 4.3E-177 T 23-04-2016 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 5.2E-9 T 23-04-2016 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 5.2E-9 T 23-04-2016 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 5.2E-9 T 23-04-2016 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 5.2E-9 T 23-04-2016 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 SUPERFAMILY SSF48557 3 428 4.56E-140 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 Gene3D G3DSA:1.10.275.10 2 90 3.0E-35 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 23-04-2016 IPR020557 Fumarate lyase, conserved site GO:0003824 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 428 3.8E-26 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 2.8E-26 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.8E-26 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 2.8E-26 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 2.8E-26 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 PANTHER PTHR11444 3 424 4.3E-177 T 23-04-2016 IPR000362 Fumarate lyase family SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 Gene3D G3DSA:1.20.200.10 91 356 9.4E-95 T 23-04-2016 SHYC_RS04185 a2cb9a2467241756c017fdf56ebbefde 431 SMART SM00998 349 429 6.0E-40 T 23-04-2016 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00075 SHYC_RS00810 d437f2b6717276f4b56a73b8e0301e65 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 211 2.1E-24 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS00810 d437f2b6717276f4b56a73b8e0301e65 225 PANTHER PTHR30151 18 225 9.0E-84 T 23-04-2016 SHYC_RS00810 d437f2b6717276f4b56a73b8e0301e65 225 SUPERFAMILY SSF161098 18 205 2.75E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS00810 d437f2b6717276f4b56a73b8e0301e65 225 Gene3D G3DSA:1.10.3720.10 16 213 5.3E-31 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS00810 d437f2b6717276f4b56a73b8e0301e65 225 PANTHER PTHR30151:SF23 18 225 9.0E-84 T 23-04-2016 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 PRINTS PR01467 Bacterial arginine repressor signature 119 134 1.3E-24 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 PRINTS PR01467 Bacterial arginine repressor signature 89 102 1.3E-24 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 PRINTS PR01467 Bacterial arginine repressor signature 22 35 1.3E-24 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 PRINTS PR01467 Bacterial arginine repressor signature 38 53 1.3E-24 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 PANTHER PTHR34471 1 150 1.1E-63 T 23-04-2016 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 Pfam PF02863 Arginine repressor, C-terminal domain 82 146 3.7E-27 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 Gene3D G3DSA:1.10.10.10 10 68 3.8E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 SUPERFAMILY SSF46785 4 78 6.35E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 Hamap MF_00173 Arginine repressor [argR]. 1 150 69.585 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 Pfam PF01316 Arginine repressor, DNA binding domain 3 70 7.7E-27 T 23-04-2016 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 UniPathway: UPA00068 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 88 150 2.0E-20 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 SUPERFAMILY SSF55252 80 150 2.22E-23 T 23-04-2016 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 UniPathway: UPA00068 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 Gene3D G3DSA:3.30.1360.40 74 149 6.0E-30 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 TIGRFAM TIGR01529 argR_whole: arginine repressor 7 149 4.5E-51 T 23-04-2016 IPR001669 Arginine repressor GO:0003700|GO:0006355 UniPathway: UPA00068 SHYC_RS06775 162182621eceb20b1287074bdc54692f 150 PANTHER PTHR34471:SF1 1 150 1.1E-63 T 23-04-2016 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Gene3D G3DSA:3.20.20.60 533 870 1.1E-124 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 PANTHER PTHR22931 1 871 0.0 T 23-04-2016 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 PIRSF PIRSF000853 1 874 0.0 T 23-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Gene3D G3DSA:1.20.80.30 111 197 2.3E-29 T 23-04-2016 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 SUPERFAMILY SSF51621 512 867 1.46E-113 T 23-04-2016 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 17 300 1.0E-43 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 303 355 4.8E-11 T 23-04-2016 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Gene3D G3DSA:3.50.30.10 404 506 1.6E-37 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Pfam PF00391 PEP-utilising enzyme, mobile domain 422 503 3.4E-26 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Gene3D G3DSA:1.10.189.10 341 403 2.0E-28 T 23-04-2016 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 517 867 2.2E-76 T 23-04-2016 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 TIGRFAM TIGR01828 pyru_phos_dikin: pyruvate, phosphate dikinase 3 868 0.0 T 23-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 760 778 - T 23-04-2016 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 SUPERFAMILY SSF52009 393 512 1.96E-34 T 23-04-2016 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Gene3D G3DSA:3.30.470.20 243 340 2.3E-38 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 PANTHER PTHR22931:SF9 1 871 0.0 T 23-04-2016 IPR010121 Pyruvate, phosphate dikinase GO:0006090|GO:0050242 KEGG: 00620+2.7.9.1|KEGG: 00710+2.7.9.1|KEGG: 00720+2.7.9.1|MetaCyc: PWY-241|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 450 461 - T 23-04-2016 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Gene3D G3DSA:3.30.1490.20 199 242 8.6E-58 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 Gene3D G3DSA:3.30.1490.20 3 110 8.6E-58 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS11205 bfa5041f0a8e3e9118d0d86b530249b7 874 SUPERFAMILY SSF56059 1 378 2.24E-138 T 23-04-2016 SHYC_RS07075 1b66dd294f25da7e35bd25f4f031afd3 208 SUPERFAMILY SSF52980 34 200 5.36E-65 T 23-04-2016 IPR011335 Restriction endonuclease type II-like SHYC_RS07075 1b66dd294f25da7e35bd25f4f031afd3 208 PIRSF PIRSF037785 23 207 5.1E-76 T 23-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SHYC_RS07075 1b66dd294f25da7e35bd25f4f031afd3 208 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 208 97.825 T 23-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SHYC_RS07075 1b66dd294f25da7e35bd25f4f031afd3 208 Gene3D G3DSA:3.40.1350.10 33 202 1.2E-70 T 23-04-2016 IPR011856 tRNA endonuclease-like domain GO:0003676|GO:0004518 SHYC_RS07075 1b66dd294f25da7e35bd25f4f031afd3 208 Pfam PF03838 Recombination protein U 32 197 4.5E-65 T 23-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SHYC_RS07075 1b66dd294f25da7e35bd25f4f031afd3 208 PANTHER PTHR41275 1 208 1.8E-95 T 23-04-2016 SHYC_RS07075 1b66dd294f25da7e35bd25f4f031afd3 208 TIGRFAM TIGR00648 recU: recombination protein U 31 199 3.5E-79 T 23-04-2016 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 SHYC_RS02840 82c8be2effbd94bd014cfbbbab43fadf 358 Gene3D G3DSA:3.40.50.720 1 139 1.7E-19 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02840 82c8be2effbd94bd014cfbbbab43fadf 358 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 187 333 4.2E-36 T 23-04-2016 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 SHYC_RS02840 82c8be2effbd94bd014cfbbbab43fadf 358 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 2 103 5.5E-7 T 23-04-2016 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|UniPathway: UPA00940 SHYC_RS02840 82c8be2effbd94bd014cfbbbab43fadf 358 Gene3D G3DSA:1.10.1040.10 196 350 1.0E-44 T 23-04-2016 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 SHYC_RS02840 82c8be2effbd94bd014cfbbbab43fadf 358 SUPERFAMILY SSF51735 1 107 1.12E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02840 82c8be2effbd94bd014cfbbbab43fadf 358 SUPERFAMILY SSF48179 190 355 2.69E-39 T 23-04-2016 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 SHYC_RS09190 6d336c1a73e179a39887f4fc4178823a 129 Hamap MF_01536 UPF0344 protein . 3 126 14.419 T 23-04-2016 IPR010899 Protein of unknown function UPF0344 SHYC_RS09190 6d336c1a73e179a39887f4fc4178823a 129 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 18 122 2.0E-30 T 23-04-2016 IPR010899 Protein of unknown function UPF0344 SHYC_RS09190 6d336c1a73e179a39887f4fc4178823a 129 Pfam PF07457 Protein of unknown function (DUF1516) 5 116 8.4E-33 T 23-04-2016 IPR010899 Protein of unknown function UPF0344 SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 299 305 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 194 205 - T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 PANTHER PTHR18895 252 375 2.6E-90 T 23-04-2016 SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 PANTHER PTHR18895 39 217 2.6E-90 T 23-04-2016 SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 Gene3D G3DSA:3.40.50.150 250 370 5.6E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 Gene3D G3DSA:3.40.50.150 143 213 5.6E-32 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 Pfam PF01170 Putative RNA methylase family UPF0020 161 367 1.7E-58 T 23-04-2016 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 PANTHER PTHR18895:SF62 252 375 2.6E-90 T 23-04-2016 SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 PANTHER PTHR18895:SF62 39 217 2.6E-90 T 23-04-2016 SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 SMART SM00981 55 153 5.7E-10 T 23-04-2016 IPR004114 THUMP domain GO:0003723 SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 Pfam PF02926 THUMP domain 32 153 4.4E-12 T 23-04-2016 IPR004114 THUMP domain GO:0003723 SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 SUPERFAMILY SSF53335 140 216 2.14E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS07095 274d0b813b2ba240d2ba4bb908e97401 377 SUPERFAMILY SSF53335 253 368 2.14E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05900 eb5a4c811c778c8b72bbc6a2b501db26 351 PANTHER PTHR10804 111 351 1.7E-143 T 23-04-2016 SHYC_RS05900 eb5a4c811c778c8b72bbc6a2b501db26 351 PANTHER PTHR10804 1 94 1.7E-143 T 23-04-2016 SHYC_RS05900 eb5a4c811c778c8b72bbc6a2b501db26 351 Gene3D G3DSA:3.40.350.10 2 128 3.7E-22 T 23-04-2016 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal SHYC_RS05900 eb5a4c811c778c8b72bbc6a2b501db26 351 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 130 6.4E-22 T 23-04-2016 IPR000587 Creatinase, N-terminal GO:0016787 SHYC_RS05900 eb5a4c811c778c8b72bbc6a2b501db26 351 SUPERFAMILY SSF55920 130 349 6.41E-76 T 23-04-2016 IPR000994 Peptidase M24, structural domain SHYC_RS05900 eb5a4c811c778c8b72bbc6a2b501db26 351 PANTHER PTHR10804:SF106 111 351 1.7E-143 T 23-04-2016 SHYC_RS05900 eb5a4c811c778c8b72bbc6a2b501db26 351 PANTHER PTHR10804:SF106 1 94 1.7E-143 T 23-04-2016 SHYC_RS05900 eb5a4c811c778c8b72bbc6a2b501db26 351 Gene3D G3DSA:3.90.230.10 130 351 4.0E-84 T 23-04-2016 IPR000994 Peptidase M24, structural domain SHYC_RS05900 eb5a4c811c778c8b72bbc6a2b501db26 351 Pfam PF00557 Metallopeptidase family M24 139 340 1.9E-65 T 23-04-2016 IPR000994 Peptidase M24, structural domain SHYC_RS05900 eb5a4c811c778c8b72bbc6a2b501db26 351 SUPERFAMILY SSF53092 5 128 2.75E-22 T 23-04-2016 IPR028980 Creatinase/Aminopeptidase P, N-terminal SHYC_RS11460 de82a57cf538e818d326cc3df355c2b5 451 Gene3D G3DSA:1.10.720.30 200 239 1.3E-12 T 23-04-2016 IPR003034 SAP domain SHYC_RS11460 de82a57cf538e818d326cc3df355c2b5 451 Pfam PF02037 SAP domain 202 232 1.1E-10 T 23-04-2016 IPR003034 SAP domain SHYC_RS11460 de82a57cf538e818d326cc3df355c2b5 451 SUPERFAMILY SSF68906 198 233 1.04E-8 T 23-04-2016 SHYC_RS11460 de82a57cf538e818d326cc3df355c2b5 451 SMART SM00513 200 234 5.3E-6 T 23-04-2016 IPR003034 SAP domain SHYC_RS11195 c5702fb24aed6af7be0b4f14c914643e 442 Pfam PF00209 Sodium:neurotransmitter symporter family 152 441 8.7E-25 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SHYC_RS11195 c5702fb24aed6af7be0b4f14c914643e 442 Pfam PF00209 Sodium:neurotransmitter symporter family 5 115 1.5E-19 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SHYC_RS11195 c5702fb24aed6af7be0b4f14c914643e 442 PANTHER PTHR11616:SF167 3 442 2.3E-158 T 23-04-2016 SHYC_RS11195 c5702fb24aed6af7be0b4f14c914643e 442 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 28 42 - T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SHYC_RS11195 c5702fb24aed6af7be0b4f14c914643e 442 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 9.7E-16 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SHYC_RS11195 c5702fb24aed6af7be0b4f14c914643e 442 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 9.7E-16 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SHYC_RS11195 c5702fb24aed6af7be0b4f14c914643e 442 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 422 442 9.7E-16 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SHYC_RS11195 c5702fb24aed6af7be0b4f14c914643e 442 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 9.7E-16 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SHYC_RS11195 c5702fb24aed6af7be0b4f14c914643e 442 PANTHER PTHR11616 3 442 2.3E-158 T 23-04-2016 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 SHYC_RS11195 c5702fb24aed6af7be0b4f14c914643e 442 SUPERFAMILY SSF161070 5 441 3.53E-112 T 23-04-2016 SHYC_RS06175 89598db22e757643f13f7fdad111326b 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 372 1.9E-182 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS06175 89598db22e757643f13f7fdad111326b 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 132 365 1.4E-94 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS06175 89598db22e757643f13f7fdad111326b 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 372 2.6E-174 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS06175 89598db22e757643f13f7fdad111326b 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 363 57.56 T 23-04-2016 IPR004803 Queuine tRNA-ribosyltransferase GO:0008033|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS06175 89598db22e757643f13f7fdad111326b 379 PANTHER PTHR21148:SF26 1 369 9.7E-185 T 23-04-2016 SHYC_RS06175 89598db22e757643f13f7fdad111326b 379 PANTHER PTHR21148 1 369 9.7E-185 T 23-04-2016 SHYC_RS06175 89598db22e757643f13f7fdad111326b 379 SUPERFAMILY SSF51713 2 369 6.8E-164 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS06175 89598db22e757643f13f7fdad111326b 379 Gene3D G3DSA:3.20.20.105 2 370 9.6E-175 T 23-04-2016 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0008479|GO:0008616 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS04085 1a99798578afe1fe437176b10222ba7b 453 PIRSF PIRSF002746 2 453 4.8E-168 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SHYC_RS04085 1a99798578afe1fe437176b10222ba7b 453 Pfam PF02447 GntP family permease 6 451 5.1E-169 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SHYC_RS04085 1a99798578afe1fe437176b10222ba7b 453 PANTHER PTHR30354:SF1 2 453 4.1E-237 T 23-04-2016 SHYC_RS04085 1a99798578afe1fe437176b10222ba7b 453 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 7 453 3.7E-179 T 23-04-2016 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 SHYC_RS04085 1a99798578afe1fe437176b10222ba7b 453 PANTHER PTHR30354 2 453 4.1E-237 T 23-04-2016 SHYC_RS02475 298b1026d0be4eb7fee6d9078f29dc89 159 SMART SM00347 25 120 2.9E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS02475 298b1026d0be4eb7fee6d9078f29dc89 159 Pfam PF12802 MarR family 30 88 4.7E-8 T 23-04-2016 SHYC_RS02475 298b1026d0be4eb7fee6d9078f29dc89 159 SUPERFAMILY SSF46785 9 130 1.53E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02475 298b1026d0be4eb7fee6d9078f29dc89 159 Gene3D G3DSA:1.10.10.10 9 132 6.4E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10545 d71c429261181351c1c6aed664434d48 223 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 24 220 1.5E-65 T 23-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 SHYC_RS10545 d71c429261181351c1c6aed664434d48 223 SUPERFAMILY SSF51366 2 219 1.41E-58 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHYC_RS10545 d71c429261181351c1c6aed664434d48 223 PANTHER PTHR36204:SF1 1 220 2.4E-102 T 23-04-2016 SHYC_RS10545 d71c429261181351c1c6aed664434d48 223 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 1 221 39.922 T 23-04-2016 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9|UniPathway: UPA00629 SHYC_RS10545 d71c429261181351c1c6aed664434d48 223 Gene3D G3DSA:3.20.20.70 3 221 4.7E-88 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS10545 d71c429261181351c1c6aed664434d48 223 PANTHER PTHR36204 1 220 2.4E-102 T 23-04-2016 SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 5 396 4.4E-162 T 23-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 Gene3D G3DSA:3.90.1150.10 2 59 1.7E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 Gene3D G3DSA:3.90.1150.10 309 398 1.7E-40 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 PANTHER PTHR11986 2 398 3.0E-225 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 Pfam PF00202 Aminotransferase class-III 16 395 2.9E-131 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 Gene3D G3DSA:3.40.640.10 60 306 1.3E-88 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 SUPERFAMILY SSF53383 14 397 1.25E-125 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 13 397 37.77 T 23-04-2016 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 Hamap MF_01689 Ornithine aminotransferase [rocD]. 5 397 67.065 T 23-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 SHYC_RS09245 4d1788f2da19edf2723d3d32f686c759 400 PANTHER PTHR11986:SF18 2 398 3.0E-225 T 23-04-2016 IPR010164 Ornithine aminotransferase GO:0008483|GO:0030170 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|UniPathway: UPA00098 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 SUPERFAMILY SSF55190 2 113 4.58E-26 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 Pfam PF00750 tRNA synthetases class I (R) 109 407 3.0E-29 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 Pfam PF05746 DALR anticodon binding domain 435 552 3.0E-35 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 PANTHER PTHR11956 1 552 1.1E-244 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 Gene3D G3DSA:3.30.1360.70 6 110 3.2E-30 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 PANTHER PTHR11956:SF6 1 552 1.1E-244 T 23-04-2016 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 132 141 - T 23-04-2016 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 552 27.139 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 552 1.2E-155 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 SUPERFAMILY SSF47323 429 552 2.42E-34 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 Gene3D G3DSA:1.10.730.10 440 552 1.5E-41 T 23-04-2016 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 SMART SM00836 434 552 1.4E-48 T 23-04-2016 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 Gene3D G3DSA:3.40.50.620 116 439 4.9E-112 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 SMART SM01016 5 93 8.5E-34 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 10 93 1.1E-24 T 23-04-2016 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 SUPERFAMILY SSF52374 117 445 7.51E-100 T 23-04-2016 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 137 153 5.4E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 122 137 5.4E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 5.4E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS10390 49edd45f17478739b7fc1beab1fc1ea7 552 PRINTS PR01038 Arginyl-tRNA synthetase signature 161 174 5.4E-25 T 23-04-2016 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: REACT_71 SHYC_RS03265 b7b07af0ba357534dd8e28c0a9058cb9 142 PANTHER PTHR30345 3 142 1.2E-87 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03265 b7b07af0ba357534dd8e28c0a9058cb9 142 TIGRFAM TIGR01118 lacA: galactose-6-phosphate isomerase, LacA subunit 3 141 7.9E-74 T 23-04-2016 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03265 b7b07af0ba357534dd8e28c0a9058cb9 142 SUPERFAMILY SSF89623 2 141 5.1E-44 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03265 b7b07af0ba357534dd8e28c0a9058cb9 142 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 140 1.8E-35 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03265 b7b07af0ba357534dd8e28c0a9058cb9 142 PIRSF PIRSF005384 1 142 4.8E-43 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03265 b7b07af0ba357534dd8e28c0a9058cb9 142 Pfam PF02502 Ribose/Galactose Isomerase 3 138 4.1E-39 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03265 b7b07af0ba357534dd8e28c0a9058cb9 142 PANTHER PTHR30345:SF5 3 142 1.2E-87 T 23-04-2016 SHYC_RS03265 b7b07af0ba357534dd8e28c0a9058cb9 142 Hamap MF_01555 Galactose-6-phosphate isomerase subunit LacA [lacA]. 1 142 40.192 T 23-04-2016 IPR004783 Galactose-6-phosphate isomerase subunit LacA GO:0005990|GO:0050044 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS03265 b7b07af0ba357534dd8e28c0a9058cb9 142 Gene3D G3DSA:3.40.1400.10 2 141 6.6E-43 T 23-04-2016 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26|UniPathway: UPA00702 SHYC_RS05785 6e9d4f13e0b2d0b08ac2e2524585ce12 294 PANTHER PTHR32282:SF5 5 290 1.4E-62 T 23-04-2016 SHYC_RS05785 6e9d4f13e0b2d0b08ac2e2524585ce12 294 Gene3D G3DSA:1.10.3810.10 99 286 3.0E-59 T 23-04-2016 SHYC_RS05785 6e9d4f13e0b2d0b08ac2e2524585ce12 294 SUPERFAMILY SSF53955 84 291 1.41E-58 T 23-04-2016 IPR023346 Lysozyme-like domain SHYC_RS05785 6e9d4f13e0b2d0b08ac2e2524585ce12 294 Pfam PF00912 Transglycosylase 97 270 3.2E-53 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SHYC_RS05785 6e9d4f13e0b2d0b08ac2e2524585ce12 294 PANTHER PTHR32282 5 290 1.4E-62 T 23-04-2016 SHYC_RS01860 c8da426e8600378aca07e7cb794e2d7e 118 Gene3D G3DSA:2.10.150.10 1 105 3.9E-51 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01860 c8da426e8600378aca07e7cb794e2d7e 118 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.633 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01860 c8da426e8600378aca07e7cb794e2d7e 118 SUPERFAMILY SSF51278 1 106 2.88E-47 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01860 c8da426e8600378aca07e7cb794e2d7e 118 PANTHER PTHR33569:SF1 1 106 7.3E-65 T 23-04-2016 SHYC_RS01860 c8da426e8600378aca07e7cb794e2d7e 118 Pfam PF00699 Urease beta subunit 3 99 4.4E-45 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01860 c8da426e8600378aca07e7cb794e2d7e 118 PANTHER PTHR33569 1 106 7.3E-65 T 23-04-2016 SHYC_RS01860 c8da426e8600378aca07e7cb794e2d7e 118 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 4.1E-48 T 23-04-2016 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS10790 58d786c19e32f90e1f7b3b5a59901c93 471 PANTHER PTHR11751 95 465 3.3E-106 T 23-04-2016 SHYC_RS10790 58d786c19e32f90e1f7b3b5a59901c93 471 Gene3D G3DSA:1.10.10.10 6 80 1.3E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10790 58d786c19e32f90e1f7b3b5a59901c93 471 Gene3D G3DSA:3.40.640.10 147 356 1.9E-41 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS10790 58d786c19e32f90e1f7b3b5a59901c93 471 Pfam PF00155 Aminotransferase class I and II 136 398 7.2E-16 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHYC_RS10790 58d786c19e32f90e1f7b3b5a59901c93 471 PANTHER PTHR11751:SF10 95 465 3.3E-106 T 23-04-2016 SHYC_RS10790 58d786c19e32f90e1f7b3b5a59901c93 471 SUPERFAMILY SSF53383 73 463 1.14E-65 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS10790 58d786c19e32f90e1f7b3b5a59901c93 471 SMART SM00345 20 79 1.6E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS10790 58d786c19e32f90e1f7b3b5a59901c93 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 1.0E-14 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS10790 58d786c19e32f90e1f7b3b5a59901c93 471 SUPERFAMILY SSF46785 13 91 3.84E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS08515 726eacadacf88f67b541722577d7be94 406 PANTHER PTHR30474 13 406 2.8E-136 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SHYC_RS08515 726eacadacf88f67b541722577d7be94 406 PANTHER PTHR30474:SF2 13 406 2.8E-136 T 23-04-2016 SHYC_RS08515 726eacadacf88f67b541722577d7be94 406 Pfam PF01098 Cell cycle protein 23 390 2.2E-96 T 23-04-2016 IPR001182 Cell cycle protein FtsW/RodA GO:0016021|GO:0051301 SHYC_RS03575 4c9e9ad0a81bab71b580abd6d85bf39a 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 4 415 1.0E-153 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03575 4c9e9ad0a81bab71b580abd6d85bf39a 421 Gene3D G3DSA:3.65.10.10 23 222 5.6E-58 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHYC_RS03575 4c9e9ad0a81bab71b580abd6d85bf39a 421 Gene3D G3DSA:3.65.10.10 223 415 8.8E-53 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHYC_RS03575 4c9e9ad0a81bab71b580abd6d85bf39a 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 3 417 39.579 T 23-04-2016 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03575 4c9e9ad0a81bab71b580abd6d85bf39a 421 SUPERFAMILY SSF55205 5 417 3.43E-121 T 23-04-2016 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 SHYC_RS03575 4c9e9ad0a81bab71b580abd6d85bf39a 421 PANTHER PTHR21090 4 415 7.0E-159 T 23-04-2016 SHYC_RS03575 4c9e9ad0a81bab71b580abd6d85bf39a 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 9 407 1.4E-89 T 23-04-2016 IPR001986 Enolpyruvate transferase domain GO:0016765 SHYC_RS11635 1dd24fd295ba7811066363602950a7b8 391 SUPERFAMILY SSF53383 18 375 1.36E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS11635 1dd24fd295ba7811066363602950a7b8 391 Gene3D G3DSA:3.90.1150.10 245 374 1.7E-36 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS11635 1dd24fd295ba7811066363602950a7b8 391 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 373 2.7E-124 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS11635 1dd24fd295ba7811066363602950a7b8 391 Gene3D G3DSA:3.40.640.10 6 244 4.6E-83 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS11635 1dd24fd295ba7811066363602950a7b8 391 PANTHER PTHR11808:SF50 1 377 1.2E-166 T 23-04-2016 SHYC_RS11635 1dd24fd295ba7811066363602950a7b8 391 PIRSF PIRSF001434 1 376 1.8E-122 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS11635 1dd24fd295ba7811066363602950a7b8 391 PANTHER PTHR11808 1 377 1.2E-166 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS11635 1dd24fd295ba7811066363602950a7b8 391 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS11800 204e80b72db81716f14cd9d91600e1ca 1308 PANTHER PTHR15194 970 1096 2.3E-21 T 23-04-2016 SHYC_RS11800 204e80b72db81716f14cd9d91600e1ca 1308 PANTHER PTHR15194:SF23 970 1096 2.3E-21 T 23-04-2016 IPR033233 Cerebellar degeneration-related antigen 1 SHYC_RS11800 204e80b72db81716f14cd9d91600e1ca 1308 PANTHER PTHR15194:SF23 366 947 2.3E-21 T 23-04-2016 IPR033233 Cerebellar degeneration-related antigen 1 SHYC_RS11800 204e80b72db81716f14cd9d91600e1ca 1308 PANTHER PTHR15194 366 947 2.3E-21 T 23-04-2016 SHYC_RS02685 bc2ef56b8cc81e980eed18db0498fac9 310 PIRSF PIRSF036979 24 309 2.5E-27 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS02685 bc2ef56b8cc81e980eed18db0498fac9 310 Gene3D G3DSA:3.40.800.10 2 308 1.7E-83 T 23-04-2016 IPR023696 Ureohydrolase domain SHYC_RS02685 bc2ef56b8cc81e980eed18db0498fac9 310 PANTHER PTHR11358:SF35 6 308 7.2E-100 T 23-04-2016 SHYC_RS02685 bc2ef56b8cc81e980eed18db0498fac9 310 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 308 35.628 T 23-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 SHYC_RS02685 bc2ef56b8cc81e980eed18db0498fac9 310 PANTHER PTHR11358 6 308 7.2E-100 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS02685 bc2ef56b8cc81e980eed18db0498fac9 310 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 307 1.1E-102 T 23-04-2016 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8|UniPathway: UPA00379 SHYC_RS02685 bc2ef56b8cc81e980eed18db0498fac9 310 SUPERFAMILY SSF52768 9 308 3.42E-66 T 23-04-2016 SHYC_RS02685 bc2ef56b8cc81e980eed18db0498fac9 310 Pfam PF00491 Arginase family 43 302 6.2E-45 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 440 457 - T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 SUPERFAMILY SSF55604 429 500 3.01E-20 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 PANTHER PTHR30009:SF2 6 511 6.2E-288 T 23-04-2016 SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 403 486 7.2E-23 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 Gene3D G3DSA:2.70.70.10 524 675 1.2E-59 T 23-04-2016 SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 SUPERFAMILY SSF51261 526 674 3.66E-54 T 23-04-2016 IPR011055 Duplicated hybrid motif SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 Pfam PF00367 phosphotransferase system, EIIB 431 462 3.1E-13 T 23-04-2016 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 533 652 8.5E-48 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 3 502 6.9E-241 T 23-04-2016 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 Gene3D G3DSA:3.30.1360.60 425 501 3.5E-27 T 23-04-2016 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 Pfam PF02378 Phosphotransferase system, EIIC 13 344 5.0E-95 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 595 607 - T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 PANTHER PTHR30009 6 511 6.2E-288 T 23-04-2016 SHYC_RS07385 4e98bcb3bb08774b7d139ac666b703a5 676 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 533 654 8.5E-52 T 23-04-2016 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS10210 54564aea5fa6eddd65f220c8c6975386 277 PANTHER PTHR33545 2 277 3.6E-156 T 23-04-2016 SHYC_RS10210 54564aea5fa6eddd65f220c8c6975386 277 PIRSF PIRSF006483 1 277 6.1E-80 T 23-04-2016 IPR003740 Uncharacterised membrane protein YitT SHYC_RS10210 54564aea5fa6eddd65f220c8c6975386 277 PANTHER PTHR33545:SF4 2 277 3.6E-156 T 23-04-2016 SHYC_RS10210 54564aea5fa6eddd65f220c8c6975386 277 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 1.3E-21 T 23-04-2016 IPR019264 Domain of unknown function DUF2179 SHYC_RS10210 54564aea5fa6eddd65f220c8c6975386 277 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 7 210 2.3E-61 T 23-04-2016 IPR003740 Uncharacterised membrane protein YitT SHYC_RS10090 cda295ac321ea7676aa57f90e75b7cbe 400 PANTHER PTHR23535:SF2 1 399 1.5E-145 T 23-04-2016 SHYC_RS10090 cda295ac321ea7676aa57f90e75b7cbe 400 PANTHER PTHR23535 1 399 1.5E-145 T 23-04-2016 SHYC_RS10090 cda295ac321ea7676aa57f90e75b7cbe 400 SUPERFAMILY SSF103473 11 396 5.49E-48 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS10090 cda295ac321ea7676aa57f90e75b7cbe 400 Gene3D G3DSA:1.20.1250.20 218 395 1.2E-19 T 23-04-2016 SHYC_RS10090 cda295ac321ea7676aa57f90e75b7cbe 400 Gene3D G3DSA:1.20.1250.20 10 196 5.3E-22 T 23-04-2016 SHYC_RS10090 cda295ac321ea7676aa57f90e75b7cbe 400 Pfam PF07690 Major Facilitator Superfamily 223 390 1.6E-15 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS10090 cda295ac321ea7676aa57f90e75b7cbe 400 Pfam PF07690 Major Facilitator Superfamily 18 199 1.8E-19 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS02465 adaf44a958b1bd0c321ba3afa3255670 708 SUPERFAMILY SSF46689 199 251 2.69E-10 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS02465 adaf44a958b1bd0c321ba3afa3255670 708 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 199 241 - T 23-04-2016 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 SHYC_RS02465 adaf44a958b1bd0c321ba3afa3255670 708 Gene3D G3DSA:1.10.10.60 207 254 1.3E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS02465 adaf44a958b1bd0c321ba3afa3255670 708 PANTHER PTHR11019 144 253 5.1E-19 T 23-04-2016 SHYC_RS02465 adaf44a958b1bd0c321ba3afa3255670 708 Pfam PF12833 Helix-turn-helix domain 168 246 5.9E-11 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHYC_RS02465 adaf44a958b1bd0c321ba3afa3255670 708 SMART SM00342 162 245 8.1E-10 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHYC_RS02465 adaf44a958b1bd0c321ba3afa3255670 708 Gene3D G3DSA:1.10.10.60 142 194 2.8E-8 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 PANTHER PTHR11655 1 178 8.5E-93 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.256 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 PANTHER PTHR11655:SF14 1 178 8.5E-93 T 23-04-2016 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 Gene3D G3DSA:3.90.930.12 2 82 1.6E-33 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 Gene3D G3DSA:3.90.930.12 84 177 4.9E-39 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.9E-76 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.5E-33 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.5E-33 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.5E-33 T 23-04-2016 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 SUPERFAMILY SSF56053 83 177 8.92E-36 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 PIRSF PIRSF002162 1 177 7.3E-52 T 23-04-2016 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 23-04-2016 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 SUPERFAMILY SSF56053 1 82 1.22E-28 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 Pfam PF00347 Ribosomal protein L6 90 164 2.7E-20 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS03135 980a31bb8c55080a37b04a1531d29136 178 Pfam PF00347 Ribosomal protein L6 11 82 5.3E-21 T 23-04-2016 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 Pfam PF14815 NUDIX domain 234 341 1.2E-16 T 23-04-2016 IPR029119 MutY, C-terminal SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 SMART SM00525 190 210 0.0063 T 23-04-2016 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: REACT_216 SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 SMART SM00478 39 189 3.5E-38 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 PANTHER PTHR10359:SF1 6 320 1.5E-86 T 23-04-2016 SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 7 273 3.0E-94 T 23-04-2016 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 Gene3D G3DSA:3.90.79.10 230 345 6.5E-18 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 SUPERFAMILY SSF55811 219 344 1.05E-16 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 Gene3D G3DSA:1.10.340.30 22 123 2.7E-41 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 Gene3D G3DSA:1.10.1670.10 124 226 1.3E-34 T 23-04-2016 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 163 1.4E-17 T 23-04-2016 IPR003265 HhH-GPD domain GO:0006284 Reactome: REACT_216 SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 191 207 - T 23-04-2016 IPR004035 Endonuclease III, iron-sulphur binding site SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 PANTHER PTHR10359 6 320 1.5E-86 T 23-04-2016 SHYC_RS04395 e03f87725e8590d4240306ffe83c5e13 349 SUPERFAMILY SSF48150 7 221 6.28E-69 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SHYC_RS05225 59b774245b6ff408f7d57e66463a9b93 134 TIGRFAM TIGR00333 nrdI: nrdI protein 14 125 1.2E-29 T 23-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SHYC_RS05225 59b774245b6ff408f7d57e66463a9b93 134 SUPERFAMILY SSF52218 5 129 5.18E-23 T 23-04-2016 IPR029039 Flavoprotein-like domain SHYC_RS05225 59b774245b6ff408f7d57e66463a9b93 134 PIRSF PIRSF005087 10 134 6.0E-36 T 23-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SHYC_RS05225 59b774245b6ff408f7d57e66463a9b93 134 PANTHER PTHR37297:SF1 11 131 2.5E-31 T 23-04-2016 SHYC_RS05225 59b774245b6ff408f7d57e66463a9b93 134 PANTHER PTHR37297 11 131 2.5E-31 T 23-04-2016 SHYC_RS05225 59b774245b6ff408f7d57e66463a9b93 134 Gene3D G3DSA:3.40.50.360 12 129 1.0E-34 T 23-04-2016 IPR029039 Flavoprotein-like domain SHYC_RS05225 59b774245b6ff408f7d57e66463a9b93 134 Pfam PF07972 NrdI Flavodoxin like 14 121 1.1E-29 T 23-04-2016 IPR004465 Ribonucleotide reductase Class Ib, NrdI SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 Pfam PF13180 PDZ domain 117 195 2.3E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 Gene3D G3DSA:3.30.750.44 74 121 6.7E-8 T 23-04-2016 SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 Gene3D G3DSA:2.30.42.10 122 195 2.6E-26 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 Pfam PF01471 Putative peptidoglycan binding domain 400 449 2.5E-11 T 23-04-2016 IPR002477 Peptidoglycan binding-like SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 SUPERFAMILY SSF47090 385 457 2.09E-13 T 23-04-2016 IPR002477 Peptidoglycan binding-like SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 Pfam PF03572 Peptidase family S41 212 375 5.3E-47 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 68 379 3.3E-95 T 23-04-2016 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 Gene3D G3DSA:1.10.101.10 387 454 4.0E-12 T 23-04-2016 IPR002477 Peptidoglycan binding-like SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 Gene3D G3DSA:3.90.226.10 457 479 1.1E-55 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 Gene3D G3DSA:3.90.226.10 196 378 1.1E-55 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 SUPERFAMILY SSF50156 89 204 1.33E-20 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 SUPERFAMILY SSF52096 205 380 9.28E-66 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 SUPERFAMILY SSF52096 53 134 9.28E-66 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 SMART SM00228 116 187 3.9E-14 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 SMART SM00245 187 376 5.2E-49 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SHYC_RS07175 644fe29eb7095076ee8590d7dbbf5065 480 PANTHER PTHR32060 42 445 3.2E-104 T 23-04-2016 SHYC_RS03970 41c6b9f0f65dd0830d22d72b57f005a4 211 PANTHER PTHR35786 1 210 5.3E-96 T 23-04-2016 SHYC_RS03970 41c6b9f0f65dd0830d22d72b57f005a4 211 Pfam PF02629 CoA binding domain 87 180 5.9E-21 T 23-04-2016 IPR003781 CoA-binding GO:0048037 SHYC_RS03970 41c6b9f0f65dd0830d22d72b57f005a4 211 PANTHER PTHR35786:SF1 1 210 5.3E-96 T 23-04-2016 SHYC_RS03970 41c6b9f0f65dd0830d22d72b57f005a4 211 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 211 36.051 T 23-04-2016 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 SHYC_RS03970 41c6b9f0f65dd0830d22d72b57f005a4 211 Pfam PF06971 Putative DNA-binding protein N-terminus 7 55 1.9E-19 T 23-04-2016 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 SHYC_RS03970 41c6b9f0f65dd0830d22d72b57f005a4 211 SMART SM00881 82 182 1.3E-7 T 23-04-2016 IPR003781 CoA-binding GO:0048037 SHYC_RS03970 41c6b9f0f65dd0830d22d72b57f005a4 211 Gene3D G3DSA:3.40.50.720 83 210 2.7E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS03970 41c6b9f0f65dd0830d22d72b57f005a4 211 SUPERFAMILY SSF51735 85 209 2.36E-24 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS03970 41c6b9f0f65dd0830d22d72b57f005a4 211 SUPERFAMILY SSF46785 9 79 1.63E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03970 41c6b9f0f65dd0830d22d72b57f005a4 211 Gene3D G3DSA:1.10.10.10 7 77 1.5E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS09290 8f282c362285af5ed1f86e4530651523 499 PANTHER PTHR22773:SF49 1 497 1.1E-171 T 23-04-2016 SHYC_RS09290 8f282c362285af5ed1f86e4530651523 499 PANTHER PTHR22773 1 497 1.1E-171 T 23-04-2016 SHYC_RS09290 8f282c362285af5ed1f86e4530651523 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 379 405 1.3E-13 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SHYC_RS09290 8f282c362285af5ed1f86e4530651523 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 135 154 1.3E-13 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SHYC_RS09290 8f282c362285af5ed1f86e4530651523 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 239 263 1.3E-13 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SHYC_RS09290 8f282c362285af5ed1f86e4530651523 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 327 346 1.3E-13 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SHYC_RS09290 8f282c362285af5ed1f86e4530651523 499 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 165 189 1.3E-13 T 23-04-2016 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 SHYC_RS09290 8f282c362285af5ed1f86e4530651523 499 Pfam PF00361 Proton-conducting membrane transporter 131 419 3.6E-50 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SHYC_RS09965 1d491ededa0b951958632c650bd0397f 157 Gene3D G3DSA:3.90.960.10 3 156 4.1E-50 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHYC_RS09965 1d491ededa0b951958632c650bd0397f 157 PANTHER PTHR30411 2 157 5.5E-54 T 23-04-2016 SHYC_RS09965 1d491ededa0b951958632c650bd0397f 157 PANTHER PTHR30411:SF0 2 157 5.5E-54 T 23-04-2016 SHYC_RS09965 1d491ededa0b951958632c650bd0397f 157 SUPERFAMILY SSF55826 5 155 4.32E-38 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHYC_RS09965 1d491ededa0b951958632c650bd0397f 157 Pfam PF04073 Aminoacyl-tRNA editing domain 34 145 3.5E-23 T 23-04-2016 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 SHYC_RS09965 1d491ededa0b951958632c650bd0397f 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 5 155 8.4E-53 T 23-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SHYC_RS09965 1d491ededa0b951958632c650bd0397f 157 PIRSF PIRSF006181 1 157 5.2E-56 T 23-04-2016 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC SHYC_RS04590 9cae728b278df54a6a0a0ac3a2b01c86 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS04590 9cae728b278df54a6a0a0ac3a2b01c86 240 PIRSF PIRSF039085 1 240 6.2E-116 T 23-04-2016 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 SHYC_RS04590 9cae728b278df54a6a0a0ac3a2b01c86 240 SMART SM00382 26 213 3.8E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS04590 9cae728b278df54a6a0a0ac3a2b01c86 240 Gene3D G3DSA:3.40.50.300 1 237 5.9E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04590 9cae728b278df54a6a0a0ac3a2b01c86 240 Pfam PF00005 ABC transporter 17 165 9.9E-39 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS04590 9cae728b278df54a6a0a0ac3a2b01c86 240 SUPERFAMILY SSF52540 1 235 2.23E-83 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04590 9cae728b278df54a6a0a0ac3a2b01c86 240 PANTHER PTHR24220 3 240 8.0E-142 T 23-04-2016 SHYC_RS04590 9cae728b278df54a6a0a0ac3a2b01c86 240 PANTHER PTHR24220:SF327 3 240 8.0E-142 T 23-04-2016 SHYC_RS03580 0333b4a139ea4fce4255b69a6fac4c28 114 Gene3D G3DSA:1.10.10.10 3 107 1.9E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03580 0333b4a139ea4fce4255b69a6fac4c28 114 PANTHER PTHR33204:SF13 2 106 3.6E-29 T 23-04-2016 SHYC_RS03580 0333b4a139ea4fce4255b69a6fac4c28 114 PANTHER PTHR33204 2 106 3.6E-29 T 23-04-2016 SHYC_RS03580 0333b4a139ea4fce4255b69a6fac4c28 114 SUPERFAMILY SSF46785 4 102 5.46E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03580 0333b4a139ea4fce4255b69a6fac4c28 114 Pfam PF01638 HxlR-like helix-turn-helix 13 103 4.4E-18 T 23-04-2016 IPR002577 Helix-turn-helix, HxlR type SHYC_RS06815 f47b0587947fe96d254c17d963be76b3 145 PANTHER PTHR40052:SF1 2 145 5.5E-109 T 23-04-2016 SHYC_RS06815 f47b0587947fe96d254c17d963be76b3 145 Pfam PF06491 Disulphide isomerase 8 142 2.4E-60 T 23-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family SHYC_RS06815 f47b0587947fe96d254c17d963be76b3 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 142 3.8E-61 T 23-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family SHYC_RS06815 f47b0587947fe96d254c17d963be76b3 145 PANTHER PTHR40052 2 145 5.5E-109 T 23-04-2016 SHYC_RS10965 f918c75a34d7756ccd53366f9dc88226 221 Gene3D G3DSA:2.40.240.10 4 94 3.1E-26 T 23-04-2016 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: REACT_71 SHYC_RS10965 f918c75a34d7756ccd53366f9dc88226 221 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 101 181 1.7E-24 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain SHYC_RS10965 f918c75a34d7756ccd53366f9dc88226 221 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 13 94 2.0E-36 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHYC_RS10965 f918c75a34d7756ccd53366f9dc88226 221 Gene3D G3DSA:2.170.120.20 98 189 4.5E-27 T 23-04-2016 IPR020057 Ribosomal protein L25, beta domain SHYC_RS10965 f918c75a34d7756ccd53366f9dc88226 221 PANTHER PTHR33284 13 211 4.3E-59 T 23-04-2016 SHYC_RS10965 f918c75a34d7756ccd53366f9dc88226 221 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 2 182 26.423 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHYC_RS10965 f918c75a34d7756ccd53366f9dc88226 221 SUPERFAMILY SSF50715 4 188 2.09E-53 T 23-04-2016 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: REACT_71 SHYC_RS10965 f918c75a34d7756ccd53366f9dc88226 221 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 12 179 1.2E-49 T 23-04-2016 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHYC_RS10965 f918c75a34d7756ccd53366f9dc88226 221 Pfam PF01386 Ribosomal L25p family 8 91 2.8E-22 T 23-04-2016 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 SHYC_RS09490 06e651daafc54b55de87ca0f35b458f0 117 SUPERFAMILY SSF52833 1 116 3.46E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09490 06e651daafc54b55de87ca0f35b458f0 117 Gene3D G3DSA:3.40.30.10 1 115 2.5E-38 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09490 06e651daafc54b55de87ca0f35b458f0 117 PANTHER PTHR30041:SF3 1 116 7.2E-45 T 23-04-2016 SHYC_RS09490 06e651daafc54b55de87ca0f35b458f0 117 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 2 116 1.6E-40 T 23-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SHYC_RS09490 06e651daafc54b55de87ca0f35b458f0 117 Pfam PF03960 ArsC family 5 114 3.6E-15 T 23-04-2016 IPR006660 Arsenate reductase-like SHYC_RS09490 06e651daafc54b55de87ca0f35b458f0 117 PANTHER PTHR30041 1 116 7.2E-45 T 23-04-2016 SHYC_RS03910 ed9ad7934f734d88f60befeb5b9c297d 509 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 5 495 9.7E-199 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SHYC_RS03910 ed9ad7934f734d88f60befeb5b9c297d 509 Gene3D G3DSA:3.20.20.70 1 347 8.3E-138 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS03910 ed9ad7934f734d88f60befeb5b9c297d 509 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 39.526 T 23-04-2016 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SHYC_RS03910 ed9ad7934f734d88f60befeb5b9c297d 509 SUPERFAMILY SSF51569 1 291 4.58E-92 T 23-04-2016 SHYC_RS03910 ed9ad7934f734d88f60befeb5b9c297d 509 Pfam PF00682 HMGL-like 5 273 8.0E-94 T 23-04-2016 IPR000891 Pyruvate carboxyltransferase GO:0003824 SHYC_RS03910 ed9ad7934f734d88f60befeb5b9c297d 509 SUPERFAMILY SSF110921 403 495 5.75E-18 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SHYC_RS03910 ed9ad7934f734d88f60befeb5b9c297d 509 PANTHER PTHR10277:SF9 1 508 2.8E-234 T 23-04-2016 SHYC_RS03910 ed9ad7934f734d88f60befeb5b9c297d 509 SMART SM00917 369 500 2.2E-29 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SHYC_RS03910 ed9ad7934f734d88f60befeb5b9c297d 509 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.1E-33 T 23-04-2016 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871|UniPathway: UPA00048 SHYC_RS03910 ed9ad7934f734d88f60befeb5b9c297d 509 PANTHER PTHR10277 1 508 2.8E-234 T 23-04-2016 SHYC_RS02865 60b0ed2232888ae7fae762eec1fa6034 350 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 4 342 1.6E-150 T 23-04-2016 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative SHYC_RS02865 60b0ed2232888ae7fae762eec1fa6034 350 PANTHER PTHR30137 2 350 1.1E-118 T 23-04-2016 SHYC_RS02865 60b0ed2232888ae7fae762eec1fa6034 350 PANTHER PTHR30137:SF8 2 350 1.1E-118 T 23-04-2016 SHYC_RS02865 60b0ed2232888ae7fae762eec1fa6034 350 SUPERFAMILY SSF51679 21 344 8.64E-76 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHYC_RS02865 60b0ed2232888ae7fae762eec1fa6034 350 Gene3D G3DSA:3.20.20.30 6 347 5.8E-85 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHYC_RS02865 60b0ed2232888ae7fae762eec1fa6034 350 Pfam PF00296 Luciferase-like monooxygenase 26 311 4.7E-45 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 PANTHER PTHR20852 9 446 8.7E-184 T 23-04-2016 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 SMART SM01230 107 356 6.5E-134 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 19 100 4.8E-32 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 Gene3D G3DSA:3.30.590.10 111 433 1.1E-125 T 23-04-2016 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 Reactome: REACT_13 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 236 251 - T 23-04-2016 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 SUPERFAMILY SSF55931 108 443 7.55E-124 T 23-04-2016 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 ProSitePatterns PS00180 Glutamine synthetase signature 1. 54 72 - T 23-04-2016 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 Pfam PF00120 Glutamine synthetase, catalytic domain 108 442 3.9E-136 T 23-04-2016 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 11 443 3.6E-174 T 23-04-2016 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 SUPERFAMILY SSF54368 7 106 7.06E-34 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 PANTHER PTHR20852:SF7 9 446 8.7E-184 T 23-04-2016 SHYC_RS07610 808d277b293c811781c02e5a38324510 446 Gene3D G3DSA:3.10.20.70 7 110 8.8E-43 T 23-04-2016 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 SHYC_RS06455 acf75bb817e61a8819bf336cf66c5d54 249 Pfam PF04452 RNA methyltransferase 18 244 1.6E-69 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS06455 acf75bb817e61a8819bf336cf66c5d54 249 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 247 3.1E-61 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS06455 acf75bb817e61a8819bf336cf66c5d54 249 Gene3D G3DSA:3.40.1280.10 74 247 2.0E-54 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHYC_RS06455 acf75bb817e61a8819bf336cf66c5d54 249 Gene3D G3DSA:2.40.240.20 1 70 3.0E-18 T 23-04-2016 SHYC_RS06455 acf75bb817e61a8819bf336cf66c5d54 249 SUPERFAMILY SSF88697 2 68 2.73E-12 T 23-04-2016 IPR015947 PUA-like domain SHYC_RS06455 acf75bb817e61a8819bf336cf66c5d54 249 PIRSF PIRSF015601 1 248 7.4E-58 T 23-04-2016 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS06455 acf75bb817e61a8819bf336cf66c5d54 249 SUPERFAMILY SSF75217 74 247 3.01E-51 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases SHYC_RS06455 acf75bb817e61a8819bf336cf66c5d54 249 PANTHER PTHR30027 1 247 1.6E-79 T 23-04-2016 SHYC_RS06455 acf75bb817e61a8819bf336cf66c5d54 249 PANTHER PTHR30027:SF3 1 247 1.6E-79 T 23-04-2016 SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 Gene3D G3DSA:3.40.50.720 40 283 5.0E-79 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PANTHER PTHR24322:SF105 49 177 1.5E-60 T 23-04-2016 SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PANTHER PTHR24322:SF105 193 225 1.5E-60 T 23-04-2016 SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 SUPERFAMILY SSF51735 43 284 3.8E-78 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 54 283 9.8E-58 T 23-04-2016 SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 180 208 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 193 212 8.8E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 132 8.8E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 181 8.8E-10 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 231 2.9E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 46 63 2.9E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 248 268 2.9E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 183 2.9E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 132 2.9E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 212 2.9E-36 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PANTHER PTHR24322 49 177 1.5E-60 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01995 193626bdef4d26cb2f19a0c228a6de12 288 PANTHER PTHR24322 193 225 1.5E-60 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS07520 1631a91f714276d9b4702384862431de 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 235 8.4E-24 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SHYC_RS07520 1631a91f714276d9b4702384862431de 267 Gene3D G3DSA:3.30.1240.10 88 180 1.6E-21 T 23-04-2016 SHYC_RS07520 1631a91f714276d9b4702384862431de 267 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 23-04-2016 SHYC_RS07520 1631a91f714276d9b4702384862431de 267 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 262 1.5E-64 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS07520 1631a91f714276d9b4702384862431de 267 PANTHER PTHR10000 1 267 4.1E-107 T 23-04-2016 SHYC_RS07520 1631a91f714276d9b4702384862431de 267 SUPERFAMILY SSF56784 1 266 2.89E-68 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS07520 1631a91f714276d9b4702384862431de 267 Gene3D G3DSA:3.40.50.1000 1 76 8.1E-52 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS07520 1631a91f714276d9b4702384862431de 267 Gene3D G3DSA:3.40.50.1000 181 266 8.1E-52 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS07520 1631a91f714276d9b4702384862431de 267 PANTHER PTHR10000:SF12 1 267 4.1E-107 T 23-04-2016 SHYC_RS07520 1631a91f714276d9b4702384862431de 267 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 262 7.1E-56 T 23-04-2016 IPR000150 Cof protein GO:0016787 SHYC_RS01135 8f80e4c12dbe6e7f6713aee5ff74f56a 142 SUPERFAMILY SSF46785 2 135 2.89E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01135 8f80e4c12dbe6e7f6713aee5ff74f56a 142 Gene3D G3DSA:1.10.10.10 1 139 4.4E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01135 8f80e4c12dbe6e7f6713aee5ff74f56a 142 PANTHER PTHR33221 9 139 4.2E-22 T 23-04-2016 SHYC_RS01135 8f80e4c12dbe6e7f6713aee5ff74f56a 142 Pfam PF02082 Transcriptional regulator 3 77 5.6E-17 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type SHYC_RS01135 8f80e4c12dbe6e7f6713aee5ff74f56a 142 PANTHER PTHR33221:SF7 9 139 4.2E-22 T 23-04-2016 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 PANTHER PTHR11469 52 438 3.2E-156 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 Pfam PF00342 Phosphoglucose isomerase 76 421 6.2E-23 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 Gene3D G3DSA:3.40.50.10490 194 412 3.0E-95 T 23-04-2016 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 Gene3D G3DSA:3.40.50.10490 69 193 9.1E-26 T 23-04-2016 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 403 420 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 268 289 7.8E-26 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 371 389 7.8E-26 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 193 211 7.8E-26 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 389 403 7.8E-26 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 403 416 7.8E-26 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 7.8E-26 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 SUPERFAMILY SSF53697 4 442 1.76E-138 T 23-04-2016 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 430 25.787 T 23-04-2016 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS09220 d700ac6c558bdcbbe54762e651e0c930 443 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 197 210 - T 23-04-2016 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS00400 db2cb9473225b675bed7b726aad3ea85 315 Gene3D G3DSA:3.90.226.10 118 308 1.4E-32 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS00400 db2cb9473225b675bed7b726aad3ea85 315 PANTHER PTHR32060 120 311 2.8E-16 T 23-04-2016 SHYC_RS00400 db2cb9473225b675bed7b726aad3ea85 315 SUPERFAMILY SSF52096 57 306 1.03E-33 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS00400 db2cb9473225b675bed7b726aad3ea85 315 SMART SM00245 93 302 1.7E-8 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SHYC_RS00400 db2cb9473225b675bed7b726aad3ea85 315 Pfam PF03572 Peptidase family S41 123 300 8.0E-30 T 23-04-2016 IPR005151 Tail specific protease GO:0006508|GO:0008236 SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 SUPERFAMILY SSF46589 245 309 2.88E-18 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 Gene3D G3DSA:3.40.630.30 1 167 6.5E-54 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 Pfam PF02388 FemAB family 6 414 5.5E-148 T 23-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 Gene3D G3DSA:3.40.630.30 310 389 7.2E-52 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 Gene3D G3DSA:3.40.630.30 168 244 7.2E-52 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 Gene3D G3DSA:1.20.58.90 246 307 1.6E-25 T 23-04-2016 SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 SUPERFAMILY SSF55729 310 410 1.64E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 SUPERFAMILY SSF55729 168 245 1.64E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 SUPERFAMILY SSF55729 1 165 7.95E-58 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 PANTHER PTHR36174:SF2 1 418 1.8E-211 T 23-04-2016 SHYC_RS07335 1e9a0e72e8f267fb37ead6933c610201 419 PANTHER PTHR36174 1 418 1.8E-211 T 23-04-2016 SHYC_RS04955 d41f645f2f34185515ee850cb29cfd45 370 Gene3D G3DSA:3.90.580.10 14 104 2.2E-4 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SHYC_RS04955 d41f645f2f34185515ee850cb29cfd45 370 SUPERFAMILY SSF56731 161 296 3.4E-11 T 23-04-2016 SHYC_RS04955 d41f645f2f34185515ee850cb29cfd45 370 Gene3D G3DSA:3.40.1360.10 226 296 4.2E-7 T 23-04-2016 SHYC_RS00350 f4c821703d34648c7b28faf80a531825 336 Gene3D G3DSA:3.30.1780.10 4 150 1.0E-38 T 23-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal SHYC_RS00350 f4c821703d34648c7b28faf80a531825 336 TIGRFAM TIGR03944 dehyd_SbnB_fam: 2,3-diaminopropionate biosynthesis protein SbnB 5 336 2.7E-121 T 23-04-2016 IPR023866 2,3-diaminopropionate biosynthesis protein SbnB SHYC_RS00350 f4c821703d34648c7b28faf80a531825 336 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 25 326 7.3E-63 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin SHYC_RS00350 f4c821703d34648c7b28faf80a531825 336 PIRSF PIRSF001439 1 336 4.9E-83 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin SHYC_RS00350 f4c821703d34648c7b28faf80a531825 336 PANTHER PTHR13812 1 336 1.9E-85 T 23-04-2016 SHYC_RS00350 f4c821703d34648c7b28faf80a531825 336 SUPERFAMILY SSF51735 4 335 1.43E-76 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS00350 f4c821703d34648c7b28faf80a531825 336 PANTHER PTHR13812:SF19 1 336 1.9E-85 T 23-04-2016 SHYC_RS00350 f4c821703d34648c7b28faf80a531825 336 Gene3D G3DSA:3.40.50.720 151 308 9.0E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02430 6d3c755efd3d8d020840899ddc50af67 118 Pfam PF11337 Protein of unknown function (DUF3139) 4 79 5.1E-11 T 23-04-2016 IPR021486 Protein of unknown function DUF3139 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 PANTHER PTHR11117 1 300 1.8E-197 T 23-04-2016 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 SMART SM00881 4 100 1.3E-34 T 23-04-2016 IPR003781 CoA-binding GO:0048037 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 PIRSF PIRSF001553 1 290 1.9E-132 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 Pfam PF00549 CoA-ligase 151 268 2.6E-18 T 23-04-2016 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 285 1.2E-145 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.4E-38 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.4E-38 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.4E-38 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.4E-38 T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 Gene3D G3DSA:3.40.50.261 120 285 2.9E-74 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 23-04-2016 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 PANTHER PTHR11117:SF2 1 300 1.8E-197 T 23-04-2016 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 SUPERFAMILY SSF52210 123 285 4.32E-54 T 23-04-2016 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|UniPathway: UPA00223 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 SUPERFAMILY SSF51735 1 122 5.56E-43 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 Pfam PF02629 CoA binding domain 6 99 4.8E-31 T 23-04-2016 IPR003781 CoA-binding GO:0048037 SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 23-04-2016 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site SHYC_RS07940 8cd772288d09433133ae43dc70a7e4fd 302 Gene3D G3DSA:3.40.50.720 2 119 2.4E-56 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS03250 431628ada3345542ae0ca02e271306aa 267 SUPERFAMILY SSF56784 1 264 1.99E-25 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03250 431628ada3345542ae0ca02e271306aa 267 Gene3D G3DSA:3.40.50.1000 180 265 3.5E-23 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03250 431628ada3345542ae0ca02e271306aa 267 Gene3D G3DSA:3.40.50.1000 1 81 3.5E-23 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03250 431628ada3345542ae0ca02e271306aa 267 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 233 2.6E-30 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SHYC_RS03250 431628ada3345542ae0ca02e271306aa 267 Gene3D G3DSA:3.30.70.1410 105 179 9.4E-27 T 23-04-2016 SHYC_RS03250 431628ada3345542ae0ca02e271306aa 267 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 3 241 1.2E-17 T 23-04-2016 IPR006380 Sucrose-phosphatase, N-terminal SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 521 1.2E-5 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 Gene3D G3DSA:3.40.50.970 14 181 4.4E-47 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 PANTHER PTHR18968 15 551 1.1E-183 T 23-04-2016 SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 15 178 1.0E-31 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 PIRSF PIRSF004983 2 556 2.6E-178 T 23-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 PANTHER PTHR18968:SF114 15 551 1.1E-183 T 23-04-2016 SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 Pfam PF16582 Middle domain of thiamine pyrophosphate 199 387 1.5E-13 T 23-04-2016 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 Gene3D G3DSA:3.40.50.970 341 540 2.1E-19 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 12 428 1.2E-131 T 23-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 SUPERFAMILY SSF52518 16 181 4.91E-34 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 5 549 33.493 T 23-04-2016 IPR004433 Menaquinone biosynthesis protein MenD GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837|UniPathway: UPA00079|UniPathway: UPA01057 SHYC_RS08900 ad5392c30bd5fd12e9d4a57fdd7ae825 557 SUPERFAMILY SSF52518 371 553 2.95E-20 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS04425 44694894c5d850dd804482f7f57b7ca4 152 Pfam PF00578 AhpC/TSA family 5 131 1.4E-37 T 23-04-2016 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15 SHYC_RS04425 44694894c5d850dd804482f7f57b7ca4 152 PANTHER PTHR10681 1 134 2.4E-43 T 23-04-2016 SHYC_RS04425 44694894c5d850dd804482f7f57b7ca4 152 Gene3D G3DSA:3.40.30.10 2 138 8.2E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS04425 44694894c5d850dd804482f7f57b7ca4 152 PIRSF PIRSF000239 1 141 2.3E-26 T 23-04-2016 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15 SHYC_RS04425 44694894c5d850dd804482f7f57b7ca4 152 SUPERFAMILY SSF52833 1 150 1.42E-45 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09860 c3cce8707118d9be1313c958b89dfee9 317 Pfam PF00005 ABC transporter 18 163 2.4E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS09860 c3cce8707118d9be1313c958b89dfee9 317 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS09860 c3cce8707118d9be1313c958b89dfee9 317 Gene3D G3DSA:3.40.50.300 1 237 6.5E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09860 c3cce8707118d9be1313c958b89dfee9 317 SMART SM00382 26 212 1.4E-15 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS09860 c3cce8707118d9be1313c958b89dfee9 317 PANTHER PTHR24220 3 237 9.8E-149 T 23-04-2016 SHYC_RS09860 c3cce8707118d9be1313c958b89dfee9 317 SUPERFAMILY SSF52540 1 243 5.32E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09860 c3cce8707118d9be1313c958b89dfee9 317 PANTHER PTHR24220:SF434 3 237 9.8E-149 T 23-04-2016 SHYC_RS00045 c39c982a12bbbbde6a9b84688ca23085 500 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 494 1.4E-196 T 23-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SHYC_RS00045 c39c982a12bbbbde6a9b84688ca23085 500 Gene3D G3DSA:1.10.275.10 2 196 3.7E-70 T 23-04-2016 IPR024083 Fumarase/histidase, N-terminal SHYC_RS00045 c39c982a12bbbbde6a9b84688ca23085 500 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 2 500 43.202 T 23-04-2016 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SHYC_RS00045 c39c982a12bbbbde6a9b84688ca23085 500 Pfam PF00221 Aromatic amino acid lyase 10 470 1.4E-180 T 23-04-2016 IPR001106 Aromatic amino acid lyase SHYC_RS00045 c39c982a12bbbbde6a9b84688ca23085 500 PANTHER PTHR10362:SF7 2 497 4.4E-239 T 23-04-2016 SHYC_RS00045 c39c982a12bbbbde6a9b84688ca23085 500 SUPERFAMILY SSF48557 3 498 1.88E-180 T 23-04-2016 IPR008948 L-Aspartase-like GO:0003824 SHYC_RS00045 c39c982a12bbbbde6a9b84688ca23085 500 PANTHER PTHR10362 2 497 4.4E-239 T 23-04-2016 SHYC_RS00045 c39c982a12bbbbde6a9b84688ca23085 500 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 138 154 - T 23-04-2016 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 SHYC_RS00045 c39c982a12bbbbde6a9b84688ca23085 500 Gene3D G3DSA:1.20.200.10 197 496 1.8E-117 T 23-04-2016 SHYC_RS00980 c746da360bcbd8d605d258efc32eba8f 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 196 8.2E-54 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SHYC_RS00980 c746da360bcbd8d605d258efc32eba8f 213 Pfam PF01081 KDPG and KHG aldolase 8 189 1.5E-43 T 23-04-2016 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 SHYC_RS00980 c746da360bcbd8d605d258efc32eba8f 213 PANTHER PTHR30246 1 213 2.2E-81 T 23-04-2016 SHYC_RS00980 c746da360bcbd8d605d258efc32eba8f 213 SUPERFAMILY SSF51569 2 197 5.86E-59 T 23-04-2016 SHYC_RS00980 c746da360bcbd8d605d258efc32eba8f 213 Gene3D G3DSA:3.20.20.70 2 210 2.3E-69 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS00980 c746da360bcbd8d605d258efc32eba8f 213 PANTHER PTHR30246:SF4 1 213 2.2E-81 T 23-04-2016 SHYC_RS01595 221372b2beab83d5abf6757174f2ae58 499 Gene3D G3DSA:3.40.309.10 269 457 2.9E-72 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHYC_RS01595 221372b2beab83d5abf6757174f2ae58 499 PANTHER PTHR11699:SF164 1 494 1.4E-280 T 23-04-2016 SHYC_RS01595 221372b2beab83d5abf6757174f2ae58 499 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS01595 221372b2beab83d5abf6757174f2ae58 499 SUPERFAMILY SSF53720 6 488 9.95E-171 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHYC_RS01595 221372b2beab83d5abf6757174f2ae58 499 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 12 480 1.0E-231 T 23-04-2016 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 SHYC_RS01595 221372b2beab83d5abf6757174f2ae58 499 Pfam PF00171 Aldehyde dehydrogenase family 17 482 1.6E-175 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS01595 221372b2beab83d5abf6757174f2ae58 499 PANTHER PTHR11699 1 494 1.4E-280 T 23-04-2016 SHYC_RS01595 221372b2beab83d5abf6757174f2ae58 499 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS01595 221372b2beab83d5abf6757174f2ae58 499 Gene3D G3DSA:3.40.605.10 7 268 1.2E-94 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 PANTHER PTHR11564:SF16 109 420 6.9E-153 T 23-04-2016 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 SMART SM00382 216 396 4.2E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 Gene3D G3DSA:3.40.50.300 210 417 1.4E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 SMART SM00963 119 200 5.3E-24 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 SUPERFAMILY SSF47364 122 203 2.36E-19 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 SUPERFAMILY SSF52540 213 416 4.49E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 143 418 63.865 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 Pfam PF02881 SRP54-type protein, helical bundle domain 131 196 3.2E-13 T 23-04-2016 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 Pfam PF00448 SRP54-type protein, GTPase domain 218 417 3.1E-82 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 SMART SM00962 217 418 1.4E-124 T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 PANTHER PTHR11564 109 420 6.9E-153 T 23-04-2016 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 Gene3D G3DSA:1.20.120.140 122 203 3.5E-23 T 23-04-2016 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 144 417 2.0E-118 T 23-04-2016 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 SHYC_RS08015 616b6ce0f6b51166771ab98047c78422 440 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 391 404 - T 23-04-2016 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: REACT_15380 SHYC_RS05090 ad93b0f096cbb8a00beedfaef2539c5b 273 SUPERFAMILY SSF52743 39 244 1.96E-43 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SHYC_RS05090 ad93b0f096cbb8a00beedfaef2539c5b 273 PANTHER PTHR10795 48 244 5.0E-19 T 23-04-2016 IPR015500 Peptidase S8, subtilisin-related SHYC_RS05090 ad93b0f096cbb8a00beedfaef2539c5b 273 Gene3D G3DSA:3.40.50.200 35 244 1.4E-44 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SHYC_RS05090 ad93b0f096cbb8a00beedfaef2539c5b 273 Pfam PF00082 Subtilase family 47 244 1.9E-24 T 23-04-2016 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 SHYC_RS05090 ad93b0f096cbb8a00beedfaef2539c5b 273 PANTHER PTHR10795:SF419 48 244 5.0E-19 T 23-04-2016 SHYC_RS10200 a165419140d0432e0d67e1651dd3ba26 333 Pfam PF01032 FecCD transport family 21 328 1.5E-88 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS10200 a165419140d0432e0d67e1651dd3ba26 333 PANTHER PTHR30472 7 333 1.4E-144 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS10200 a165419140d0432e0d67e1651dd3ba26 333 SUPERFAMILY SSF81345 5 328 1.06E-77 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS10200 a165419140d0432e0d67e1651dd3ba26 333 PANTHER PTHR30472:SF26 7 333 1.4E-144 T 23-04-2016 SHYC_RS10200 a165419140d0432e0d67e1651dd3ba26 333 Gene3D G3DSA:1.10.3470.10 10 330 1.7E-93 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS10020 c54f12dd8b4d387aceb6073325312d0b 553 Gene3D G3DSA:1.20.1560.10 19 300 2.0E-21 T 23-04-2016 SHYC_RS10020 c54f12dd8b4d387aceb6073325312d0b 553 PANTHER PTHR24222 20 543 9.7E-122 T 23-04-2016 SHYC_RS10020 c54f12dd8b4d387aceb6073325312d0b 553 SUPERFAMILY SSF52540 339 542 1.39E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10020 c54f12dd8b4d387aceb6073325312d0b 553 SUPERFAMILY SSF90123 19 317 5.62E-31 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS10020 c54f12dd8b4d387aceb6073325312d0b 553 ProSitePatterns PS00211 ABC transporters family signature. 468 482 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS10020 c54f12dd8b4d387aceb6073325312d0b 553 Pfam PF00005 ABC transporter 358 495 4.0E-28 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS10020 c54f12dd8b4d387aceb6073325312d0b 553 SMART SM00382 367 538 8.9E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS10020 c54f12dd8b4d387aceb6073325312d0b 553 PANTHER PTHR24222:SF30 20 543 9.7E-122 T 23-04-2016 SHYC_RS10020 c54f12dd8b4d387aceb6073325312d0b 553 Gene3D G3DSA:3.40.50.300 343 542 1.6E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03155 82f39312f25ae79842faeddc1d470919 146 SUPERFAMILY SSF52080 4 142 2.62E-48 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P SHYC_RS03155 82f39312f25ae79842faeddc1d470919 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 23-04-2016 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03155 82f39312f25ae79842faeddc1d470919 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.339 T 23-04-2016 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 SHYC_RS03155 82f39312f25ae79842faeddc1d470919 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 142 1.2E-54 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SHYC_RS03155 82f39312f25ae79842faeddc1d470919 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 8.4E-38 T 23-04-2016 IPR021131 Ribosomal protein L18e/L15P SHYC_RS03155 82f39312f25ae79842faeddc1d470919 146 Gene3D G3DSA:3.100.10.10 32 146 1.1E-41 T 23-04-2016 SHYC_RS03155 82f39312f25ae79842faeddc1d470919 146 PANTHER PTHR12934 1 146 3.1E-74 T 23-04-2016 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 SHYC_RS00780 4bda3c66432518487418663a053a3d36 397 SUPERFAMILY SSF51905 202 327 5.41E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00780 4bda3c66432518487418663a053a3d36 397 SUPERFAMILY SSF51905 1 105 5.41E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00780 4bda3c66432518487418663a053a3d36 397 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 288 306 6.6E-6 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS00780 4bda3c66432518487418663a053a3d36 397 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 217 233 6.6E-6 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS00780 4bda3c66432518487418663a053a3d36 397 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 6.6E-6 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS00780 4bda3c66432518487418663a053a3d36 397 PANTHER PTHR10632 1 395 7.1E-213 T 23-04-2016 SHYC_RS00780 4bda3c66432518487418663a053a3d36 397 Gene3D G3DSA:3.50.50.60 5 120 1.6E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00780 4bda3c66432518487418663a053a3d36 397 Gene3D G3DSA:3.50.50.60 260 329 1.6E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00780 4bda3c66432518487418663a053a3d36 397 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 304 1.3E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00780 4bda3c66432518487418663a053a3d36 397 PANTHER PTHR10632:SF2 1 395 7.1E-213 T 23-04-2016 SHYC_RS09305 c2e9c49c766de723c7339eb36becd14f 118 PANTHER PTHR34703 3 114 4.5E-37 T 23-04-2016 SHYC_RS09305 c2e9c49c766de723c7339eb36becd14f 118 Pfam PF03334 Na+/H+ antiporter subunit 13 94 3.4E-24 T 23-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 SHYC_RS09305 c2e9c49c766de723c7339eb36becd14f 118 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 107 1.5E-23 T 23-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 SHYC_RS09305 c2e9c49c766de723c7339eb36becd14f 118 PANTHER PTHR34703:SF1 3 114 4.5E-37 T 23-04-2016 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 37 46 - T 23-04-2016 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 Gene3D G3DSA:2.40.37.10 223 371 2.2E-52 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 TIGRFAM TIGR00492 alr: alanine racemase 8 368 4.0E-104 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 Pfam PF00842 Alanine racemase, C-terminal domain 246 368 1.3E-38 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 SUPERFAMILY SSF51419 13 245 3.49E-60 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PRINTS PR00992 Alanine racemase signature 277 292 2.6E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PRINTS PR00992 Alanine racemase signature 202 229 2.6E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PRINTS PR00992 Alanine racemase signature 31 47 2.6E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PRINTS PR00992 Alanine racemase signature 351 364 2.6E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PRINTS PR00992 Alanine racemase signature 164 175 2.6E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PRINTS PR00992 Alanine racemase signature 260 275 2.6E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PRINTS PR00992 Alanine racemase signature 67 85 2.6E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PRINTS PR00992 Alanine racemase signature 129 141 2.6E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PRINTS PR00992 Alanine racemase signature 297 314 2.6E-60 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 Gene3D G3DSA:3.20.20.10 15 222 2.9E-68 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PANTHER PTHR30511:SF0 3 374 7.0E-144 T 23-04-2016 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 Pfam PF01168 Alanine racemase, N-terminal domain 13 228 1.3E-63 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 SMART SM01005 244 369 3.9E-56 T 23-04-2016 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 SUPERFAMILY SSF50621 239 369 5.23E-44 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 PANTHER PTHR30511 3 374 7.0E-144 T 23-04-2016 SHYC_RS03820 23d38beef6c83ac8b8a819326f103073 382 Hamap MF_01201 Alanine racemase. 6 369 31.319 T 23-04-2016 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS01650 41b80aa09cb026f73a0aa25e1ce256ef 278 SUPERFAMILY SSF55681 4 265 7.95E-10 T 23-04-2016 SHYC_RS01650 41b80aa09cb026f73a0aa25e1ce256ef 278 Gene3D G3DSA:3.30.930.10 14 268 7.1E-12 T 23-04-2016 SHYC_RS05825 4e4652ee591b02121e1ca6f45c0fe05d 247 PANTHER PTHR23344:SF20 12 247 1.1E-67 T 23-04-2016 SHYC_RS05825 4e4652ee591b02121e1ca6f45c0fe05d 247 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 15 241 1.6E-42 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SHYC_RS05825 4e4652ee591b02121e1ca6f45c0fe05d 247 PANTHER PTHR23344 12 247 1.1E-67 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SHYC_RS05825 4e4652ee591b02121e1ca6f45c0fe05d 247 SUPERFAMILY SSF51695 9 246 4.97E-72 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SHYC_RS05825 4e4652ee591b02121e1ca6f45c0fe05d 247 Gene3D G3DSA:3.20.20.190 5 244 4.2E-77 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SHYC_RS01610 eda089f2c2e52470d8b24eeae4829c82 209 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 49 102 3.0E-17 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SHYC_RS01610 eda089f2c2e52470d8b24eeae4829c82 209 SUPERFAMILY SSF141734 8 105 2.22E-43 T 23-04-2016 SHYC_RS01610 eda089f2c2e52470d8b24eeae4829c82 209 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 26 99 3.1E-32 T 23-04-2016 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19|UniPathway: UPA00031 SHYC_RS01610 eda089f2c2e52470d8b24eeae4829c82 209 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 106 193 7.3E-16 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SHYC_RS01610 eda089f2c2e52470d8b24eeae4829c82 209 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 103 189 17.677 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SHYC_RS01610 eda089f2c2e52470d8b24eeae4829c82 209 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 1 194 34.553 T 23-04-2016 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19|UniPathway: UPA00031|UniPathway: UPA00031 SHYC_RS01610 eda089f2c2e52470d8b24eeae4829c82 209 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 106 189 9.6E-30 T 23-04-2016 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SHYC_RS01610 eda089f2c2e52470d8b24eeae4829c82 209 SUPERFAMILY SSF101386 106 194 9.35E-24 T 23-04-2016 SHYC_RS01610 eda089f2c2e52470d8b24eeae4829c82 209 PANTHER PTHR21256 6 195 5.2E-87 T 23-04-2016 SHYC_RS09745 57a160362b015abb2cd05af36878c06f 348 Pfam PF00953 Glycosyl transferase family 4 73 225 7.5E-42 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS09745 57a160362b015abb2cd05af36878c06f 348 PANTHER PTHR22926:SF3 1 348 2.0E-115 T 23-04-2016 SHYC_RS09745 57a160362b015abb2cd05af36878c06f 348 PANTHER PTHR22926 1 348 2.0E-115 T 23-04-2016 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS09745 57a160362b015abb2cd05af36878c06f 348 ProSitePatterns PS01348 MraY family signature 2. 145 156 - T 23-04-2016 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|UniPathway: UPA00219 SHYC_RS07805 ab82efb94ca09258484c899beb7421fc 89 SMART SM01387 8 88 3.1E-51 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07805 ab82efb94ca09258484c899beb7421fc 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07805 ab82efb94ca09258484c899beb7421fc 89 PANTHER PTHR23321 1 89 1.5E-46 T 23-04-2016 SHYC_RS07805 ab82efb94ca09258484c899beb7421fc 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.01 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SHYC_RS07805 ab82efb94ca09258484c899beb7421fc 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 7.9E-41 T 23-04-2016 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 SHYC_RS07805 ab82efb94ca09258484c899beb7421fc 89 SUPERFAMILY SSF47060 3 89 9.42E-37 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SHYC_RS07805 ab82efb94ca09258484c899beb7421fc 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 1.0E-36 T 23-04-2016 SHYC_RS07805 ab82efb94ca09258484c899beb7421fc 89 Gene3D G3DSA:1.10.287.10 3 89 3.6E-40 T 23-04-2016 IPR009068 S15/NS1, RNA-binding Reactome: REACT_71 SHYC_RS07805 ab82efb94ca09258484c899beb7421fc 89 Pfam PF00312 Ribosomal protein S15 8 88 1.0E-37 T 23-04-2016 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS02980 48282ea2c4a95337134fc66d67428323 200 Gene3D G3DSA:3.90.550.10 1 196 8.1E-38 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS02980 48282ea2c4a95337134fc66d67428323 200 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 194 20.098 T 23-04-2016 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 MetaCyc: PWY-5964|MetaCyc: PWY-7639 SHYC_RS02980 48282ea2c4a95337134fc66d67428323 200 SUPERFAMILY SSF53448 1 191 5.42E-25 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS02980 48282ea2c4a95337134fc66d67428323 200 Pfam PF12804 MobA-like NTP transferase domain 3 164 2.0E-24 T 23-04-2016 IPR025877 MobA-like NTP transferase SHYC_RS02980 48282ea2c4a95337134fc66d67428323 200 PANTHER PTHR19136:SF81 1 200 5.9E-34 T 23-04-2016 SHYC_RS02980 48282ea2c4a95337134fc66d67428323 200 PANTHER PTHR19136 1 200 5.9E-34 T 23-04-2016 SHYC_RS11420 316b34067ceaba0b3d049596839da2c6 106 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 77 3.1E-14 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SHYC_RS11420 316b34067ceaba0b3d049596839da2c6 106 PANTHER PTHR34474 1 102 3.7E-27 T 23-04-2016 SHYC_RS11420 316b34067ceaba0b3d049596839da2c6 106 SUPERFAMILY SSF54909 1 101 8.26E-25 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel SHYC_RS11420 316b34067ceaba0b3d049596839da2c6 106 Gene3D G3DSA:3.30.70.900 1 103 1.3E-28 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 5 472 1.5E-154 T 23-04-2016 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PANTHER PTHR22912:SF125 142 465 1.5E-177 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PANTHER PTHR22912:SF125 4 120 1.5E-177 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 351 459 5.5E-27 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PIRSF PIRSF000350 1 437 3.8E-80 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 1.3E-33 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 296 318 1.3E-33 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 283 1.3E-33 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.3E-33 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 1.3E-33 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 SUPERFAMILY SSF51905 2 373 1.65E-54 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 331 2.2E-60 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 311 318 2.1E-63 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 2.1E-63 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 2.1E-63 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 39 54 2.1E-63 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 282 2.1E-63 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 436 456 2.1E-63 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 347 368 2.1E-63 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 429 2.1E-63 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 2.1E-63 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 40 50 - T 23-04-2016 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 Gene3D G3DSA:3.30.390.30 339 471 1.1E-37 T 23-04-2016 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PANTHER PTHR22912 142 465 1.5E-177 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 PANTHER PTHR22912 4 120 1.5E-177 T 23-04-2016 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 Gene3D G3DSA:3.50.50.60 149 338 3.0E-50 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 SUPERFAMILY SSF55424 347 471 6.7E-31 T 23-04-2016 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 SHYC_RS06795 2ccf00e5241636ce197655e5d853fa97 472 Gene3D G3DSA:3.50.50.60 4 148 8.7E-40 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01985 caa25744d309aab325b42d86c9f82d82 404 Gene3D G3DSA:1.20.1250.20 16 188 5.4E-24 T 23-04-2016 SHYC_RS01985 caa25744d309aab325b42d86c9f82d82 404 PANTHER PTHR23502 13 391 7.5E-83 T 23-04-2016 SHYC_RS01985 caa25744d309aab325b42d86c9f82d82 404 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 388 6.6E-63 T 23-04-2016 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 SHYC_RS01985 caa25744d309aab325b42d86c9f82d82 404 SUPERFAMILY SSF103473 5 389 5.89E-48 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS01985 caa25744d309aab325b42d86c9f82d82 404 Pfam PF07690 Major Facilitator Superfamily 23 364 5.2E-32 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS01985 caa25744d309aab325b42d86c9f82d82 404 PANTHER PTHR23502:SF19 13 391 7.5E-83 T 23-04-2016 SHYC_RS01855 edcd864186a2dbb0f02ced1b969af52e 100 Pfam PF00547 Urease, gamma subunit 1 99 1.8E-46 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01855 edcd864186a2dbb0f02ced1b969af52e 100 PIRSF PIRSF001223 1 100 3.6E-50 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01855 edcd864186a2dbb0f02ced1b969af52e 100 PANTHER PTHR33569 2 100 7.7E-45 T 23-04-2016 SHYC_RS01855 edcd864186a2dbb0f02ced1b969af52e 100 Gene3D G3DSA:3.30.280.10 1 99 5.7E-48 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01855 edcd864186a2dbb0f02ced1b969af52e 100 PANTHER PTHR33569:SF1 2 100 7.7E-45 T 23-04-2016 SHYC_RS01855 edcd864186a2dbb0f02ced1b969af52e 100 SUPERFAMILY SSF54111 1 99 9.42E-45 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01855 edcd864186a2dbb0f02ced1b969af52e 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 31 99 2.0E-30 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01855 edcd864186a2dbb0f02ced1b969af52e 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 1.1E-46 T 23-04-2016 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS01855 edcd864186a2dbb0f02ced1b969af52e 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 33.333 T 23-04-2016 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704|UniPathway: UPA00258 SHYC_RS07135 58392dfe8c7aa23707b05e2ab7902421 146 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 7 144 4.3E-57 T 23-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family SHYC_RS07135 58392dfe8c7aa23707b05e2ab7902421 146 PANTHER PTHR40052 1 146 8.7E-88 T 23-04-2016 SHYC_RS07135 58392dfe8c7aa23707b05e2ab7902421 146 PANTHER PTHR40052:SF2 1 146 8.7E-88 T 23-04-2016 SHYC_RS07135 58392dfe8c7aa23707b05e2ab7902421 146 Pfam PF06491 Disulphide isomerase 7 144 1.3E-55 T 23-04-2016 IPR009474 Putative bacilliredoxin, YphP/YqiW family SHYC_RS00610 e4343acfd183ceaffc967f7e90309b9e 935 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 172 1.6E-46 T 23-04-2016 IPR017500 Phage infection protein, YhgE, N-terminal SHYC_RS00610 e4343acfd183ceaffc967f7e90309b9e 935 PANTHER PTHR30294 728 929 3.6E-136 T 23-04-2016 SHYC_RS00610 e4343acfd183ceaffc967f7e90309b9e 935 PANTHER PTHR30294 1 235 3.6E-136 T 23-04-2016 SHYC_RS00610 e4343acfd183ceaffc967f7e90309b9e 935 PANTHER PTHR30294:SF4 728 929 3.6E-136 T 23-04-2016 SHYC_RS00610 e4343acfd183ceaffc967f7e90309b9e 935 PANTHER PTHR30294:SF4 1 235 3.6E-136 T 23-04-2016 SHYC_RS00610 e4343acfd183ceaffc967f7e90309b9e 935 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 712 913 1.4E-51 T 23-04-2016 IPR017501 Phage infection protein, YhgE, C-terminal SHYC_RS00610 e4343acfd183ceaffc967f7e90309b9e 935 Pfam PF12698 ABC-2 family transporter protein 22 172 1.2E-11 T 23-04-2016 SHYC_RS00610 e4343acfd183ceaffc967f7e90309b9e 935 Pfam PF12698 ABC-2 family transporter protein 645 911 6.0E-12 T 23-04-2016 SHYC_RS09735 7d3d20827f61f31944d724a9f3823052 287 SUPERFAMILY SSF82549 1 282 7.85E-89 T 23-04-2016 SHYC_RS09735 7d3d20827f61f31944d724a9f3823052 287 PANTHER PTHR33434 1 286 5.4E-77 T 23-04-2016 SHYC_RS09735 7d3d20827f61f31944d724a9f3823052 287 Gene3D G3DSA:3.30.1180.10 154 282 3.3E-39 T 23-04-2016 SHYC_RS09735 7d3d20827f61f31944d724a9f3823052 287 Gene3D G3DSA:3.40.50.10170 1 152 2.7E-47 T 23-04-2016 SHYC_RS09735 7d3d20827f61f31944d724a9f3823052 287 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 280 9.1E-88 T 23-04-2016 IPR003797 DegV SHYC_RS09735 7d3d20827f61f31944d724a9f3823052 287 PANTHER PTHR33434:SF2 1 286 5.4E-77 T 23-04-2016 SHYC_RS09735 7d3d20827f61f31944d724a9f3823052 287 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 279 1.0E-97 T 23-04-2016 IPR003797 DegV SHYC_RS02660 65a4ad2a8fb46697da9ecc38d614688c 333 Gene3D G3DSA:2.70.98.10 4 332 4.3E-70 T 23-04-2016 IPR014718 Glycoside hydrolase-type carbohydrate-binding, subgroup GO:0003824|GO:0005975|GO:0030246 SHYC_RS02660 65a4ad2a8fb46697da9ecc38d614688c 333 PANTHER PTHR10091 1 333 1.5E-64 T 23-04-2016 SHYC_RS02660 65a4ad2a8fb46697da9ecc38d614688c 333 SUPERFAMILY SSF74650 3 332 4.58E-69 T 23-04-2016 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 SHYC_RS02660 65a4ad2a8fb46697da9ecc38d614688c 333 Pfam PF01263 Aldose 1-epimerase 13 312 2.9E-52 T 23-04-2016 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 SHYC_RS02660 65a4ad2a8fb46697da9ecc38d614688c 333 PANTHER PTHR10091:SF0 1 333 1.5E-64 T 23-04-2016 SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 SUPERFAMILY SSF52540 1 55 1.84E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 SUPERFAMILY SSF52540 797 986 1.84E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 Gene3D G3DSA:3.40.50.300 1 225 1.9E-21 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 Pfam PF13558 Putative exonuclease SbcCD, C subunit 890 966 1.1E-13 T 23-04-2016 SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 PANTHER PTHR32114:SF2 2 1010 3.1E-87 T 23-04-2016 SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 PANTHER PTHR32114 2 1010 3.1E-87 T 23-04-2016 IPR027050 Nuclease SbcCD subunit C GO:0004518|GO:0006281 SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 Pfam PF13476 AAA domain 5 205 8.8E-27 T 23-04-2016 SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 Gene3D G3DSA:1.10.287.510 454 577 3.5E-4 T 23-04-2016 SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 Gene3D G3DSA:3.40.50.300 900 987 9.6E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 SUPERFAMILY SSF52540 439 491 1.03E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07440 fccf1dc378eddb04d2bd0cf0761e60a2 1010 SUPERFAMILY SSF52540 1 217 1.03E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11685 8a0404159bacaeb594936a443d4ca0db 229 PIRSF PIRSF009467 3 229 1.6E-72 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 SHYC_RS11685 8a0404159bacaeb594936a443d4ca0db 229 Pfam PF01730 UreF 37 186 3.0E-32 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 SHYC_RS11685 8a0404159bacaeb594936a443d4ca0db 229 PANTHER PTHR33620 9 229 3.9E-55 T 23-04-2016 SHYC_RS11685 8a0404159bacaeb594936a443d4ca0db 229 Hamap MF_01385 Urease accessory protein UreF [ureF]. 5 229 26.119 T 23-04-2016 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 SHYC_RS11685 8a0404159bacaeb594936a443d4ca0db 229 PANTHER PTHR33620:SF1 9 229 3.9E-55 T 23-04-2016 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 792 0.0 T 23-04-2016 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 366 388 8.0E-7 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 258 280 8.0E-7 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 8.0E-7 T 23-04-2016 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 115 1.9E-11 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 Pfam PF00361 Proton-conducting membrane transporter 128 427 9.7E-68 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PANTHER PTHR22773:SF46 1 604 1.0E-241 T 23-04-2016 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 Pfam PF13244 Domain of unknown function (DUF4040) 631 694 1.1E-22 T 23-04-2016 IPR025383 Domain of unknown function DUF4040 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 8.7E-41 T 23-04-2016 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 8.7E-41 T 23-04-2016 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 8.7E-41 T 23-04-2016 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 435 454 8.7E-41 T 23-04-2016 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 8.7E-41 T 23-04-2016 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 8.7E-41 T 23-04-2016 SHYC_RS09275 83241b89c539eda7a9a27537ae0d02be 805 PANTHER PTHR22773 1 604 1.0E-241 T 23-04-2016 SHYC_RS06245 631bf3c7685c6be823b99dee098c9fbf 61 SUPERFAMILY SSF69047 5 60 8.89E-14 T 23-04-2016 IPR008462 CsbD-like SHYC_RS06245 631bf3c7685c6be823b99dee098c9fbf 61 Gene3D G3DSA:1.10.1470.10 5 60 1.8E-18 T 23-04-2016 IPR008462 CsbD-like SHYC_RS06245 631bf3c7685c6be823b99dee098c9fbf 61 PANTHER PTHR34977 5 60 1.9E-12 T 23-04-2016 SHYC_RS06245 631bf3c7685c6be823b99dee098c9fbf 61 Pfam PF05532 CsbD-like 5 54 3.8E-17 T 23-04-2016 IPR008462 CsbD-like SHYC_RS11345 77eaca4aa3b0615732d919057b2e7c3d 246 Gene3D G3DSA:3.40.50.300 1 241 3.8E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11345 77eaca4aa3b0615732d919057b2e7c3d 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS11345 77eaca4aa3b0615732d919057b2e7c3d 246 Pfam PF00005 ABC transporter 24 168 7.2E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS11345 77eaca4aa3b0615732d919057b2e7c3d 246 SMART SM00382 32 217 9.1E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS11345 77eaca4aa3b0615732d919057b2e7c3d 246 SUPERFAMILY SSF52540 1 235 4.53E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11345 77eaca4aa3b0615732d919057b2e7c3d 246 PANTHER PTHR24220 3 241 2.9E-85 T 23-04-2016 SHYC_RS11345 77eaca4aa3b0615732d919057b2e7c3d 246 PANTHER PTHR24220:SF574 3 241 2.9E-85 T 23-04-2016 SHYC_RS07150 a6691387373bf8d389f71e5b1c3dcb64 282 PANTHER PTHR33434:SF1 1 279 1.1E-105 T 23-04-2016 SHYC_RS07150 a6691387373bf8d389f71e5b1c3dcb64 282 SUPERFAMILY SSF82549 1 279 1.26E-82 T 23-04-2016 SHYC_RS07150 a6691387373bf8d389f71e5b1c3dcb64 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 5 276 6.8E-90 T 23-04-2016 IPR003797 DegV SHYC_RS07150 a6691387373bf8d389f71e5b1c3dcb64 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 5 278 1.8E-80 T 23-04-2016 IPR003797 DegV SHYC_RS07150 a6691387373bf8d389f71e5b1c3dcb64 282 PANTHER PTHR33434 1 279 1.1E-105 T 23-04-2016 SHYC_RS07150 a6691387373bf8d389f71e5b1c3dcb64 282 Gene3D G3DSA:3.40.50.10170 3 148 2.6E-50 T 23-04-2016 SHYC_RS07150 a6691387373bf8d389f71e5b1c3dcb64 282 Gene3D G3DSA:3.30.1180.10 151 279 3.9E-34 T 23-04-2016 SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 SMART SM01400 11 127 1.5E-79 T 23-04-2016 SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 PANTHER PTHR10210:SF41 1 321 6.9E-189 T 23-04-2016 SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 Gene3D G3DSA:3.40.50.2020 7 167 2.7E-75 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 PANTHER PTHR10210 1 321 6.9E-189 T 23-04-2016 SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 135 150 - T 23-04-2016 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: REACT_474|UniPathway: UPA00087 SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 Pfam PF14572 Phosphoribosyl synthetase-associated domain 212 320 2.6E-27 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 Gene3D G3DSA:3.40.50.2020 168 293 1.4E-54 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 SUPERFAMILY SSF53271 76 312 2.09E-65 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 11 321 50.089 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 11 127 1.7E-50 T 23-04-2016 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SHYC_RS10970 028c29cfa6d45b0c9726b5131afe51a1 321 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 12 321 8.3E-126 T 23-04-2016 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|UniPathway: UPA00087 SHYC_RS02220 502265243f8507efd724de6fd8c47b8d 652 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 12 648 9.0E-285 T 23-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SHYC_RS02220 502265243f8507efd724de6fd8c47b8d 652 Gene3D G3DSA:3.60.21.10 375 571 1.3E-9 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS02220 502265243f8507efd724de6fd8c47b8d 652 Gene3D G3DSA:3.60.21.10 200 240 1.3E-9 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS02220 502265243f8507efd724de6fd8c47b8d 652 Gene3D G3DSA:3.60.21.10 28 71 1.3E-9 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS02220 502265243f8507efd724de6fd8c47b8d 652 SUPERFAMILY SSF56300 521 566 5.61E-11 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS02220 502265243f8507efd724de6fd8c47b8d 652 SUPERFAMILY SSF56300 28 66 5.61E-11 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS02220 502265243f8507efd724de6fd8c47b8d 652 SUPERFAMILY SSF56300 193 244 5.61E-11 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS02220 502265243f8507efd724de6fd8c47b8d 652 SUPERFAMILY SSF56300 391 489 5.61E-11 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS02220 502265243f8507efd724de6fd8c47b8d 652 PIRSF PIRSF000906 6 651 0.0 T 23-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SHYC_RS02220 502265243f8507efd724de6fd8c47b8d 652 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 10 651 38.956 T 23-04-2016 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|UniPathway: UPA00138 SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 PANTHER PTHR10772 2 95 1.1E-36 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 Gene3D G3DSA:2.30.33.40 2 94 1.6E-34 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 SUPERFAMILY SSF50129 1 94 3.88E-30 T 23-04-2016 IPR011032 GroES-like SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 1.1E-32 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 23.962 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 23-04-2016 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 SMART SM00883 1 93 5.7E-48 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 PRINTS PR00297 10kDa chaperonin signature 59 71 7.6E-27 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 PRINTS PR00297 10kDa chaperonin signature 2 17 7.6E-27 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 PRINTS PR00297 10kDa chaperonin signature 80 93 7.6E-27 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHYC_RS04025 6937c2fd368805d4adc2c6ed540d7fb3 95 PRINTS PR00297 10kDa chaperonin signature 24 45 7.6E-27 T 23-04-2016 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 Pfam PF00119 ATP synthase A chain 24 232 2.5E-57 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 PANTHER PTHR11410 6 239 7.7E-87 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 PANTHER PTHR11410:SF7 6 239 7.7E-87 T 23-04-2016 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 Hamap MF_01393 ATP synthase subunit a [atpB]. 17 238 13.501 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 Gene3D G3DSA:1.20.120.220 75 236 1.1E-44 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 PRINTS PR00123 ATP synthase A subunit signature 218 233 1.7E-18 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 PRINTS PR00123 ATP synthase A subunit signature 82 98 1.7E-18 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 PRINTS PR00123 ATP synthase A subunit signature 166 188 1.7E-18 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 18 234 1.2E-47 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 SUPERFAMILY SSF81336 74 232 5.23E-39 T 23-04-2016 IPR000568 ATPase, F0 complex, subunit A GO:0015078|GO:0015986 SHYC_RS03650 6a5967bcd4f8023abc72d49067c295f0 239 ProSitePatterns PS00449 ATP synthase a subunit signature. 169 178 - T 23-04-2016 IPR023011 ATPase, F0 complex, subunit A, active site SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 23-04-2016 IPR018280 Ribosomal protein S3, conserved site SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 PANTHER PTHR11760:SF19 2 214 6.8E-130 T 23-04-2016 SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 SMART SM00322 59 124 2.2E-9 T 23-04-2016 IPR004087 K Homology domain GO:0003676 SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 37.548 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 SUPERFAMILY SSF54821 106 205 1.7E-37 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 5.1E-38 T 23-04-2016 SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 SUPERFAMILY SSF54814 2 105 8.63E-38 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 Gene3D G3DSA:3.30.300.20 17 106 1.1E-33 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 Pfam PF07650 KH domain 37 108 1.0E-20 T 23-04-2016 IPR004044 K Homology domain, type 2 GO:0003723 SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 1.3E-92 T 23-04-2016 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 Gene3D G3DSA:3.30.1140.32 108 206 6.3E-43 T 23-04-2016 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 SHYC_RS03090 96ee0df0ef6b9939de0191b0770a6757 217 PANTHER PTHR11760 2 214 6.8E-130 T 23-04-2016 SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 PANTHER PTHR23303:SF17 373 603 7.4E-32 T 23-04-2016 SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 SUPERFAMILY SSF117074 473 585 8.37E-20 T 23-04-2016 SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 Gene3D G3DSA:2.60.40.1290 225 390 4.2E-38 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 Pfam PF05738 Cna protein B-type domain 401 463 1.1E-11 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 Pfam PF05738 Cna protein B-type domain 520 573 1.2E-12 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 SUPERFAMILY SSF49401 56 202 1.11E-29 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 Gene3D G3DSA:2.60.40.1280 56 224 5.4E-37 T 23-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 SUPERFAMILY SSF49401 211 398 1.74E-33 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 Pfam PF00746 Gram positive anchor 655 689 1.8E-6 T 23-04-2016 IPR019948 Gram-positive anchor SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 660 691 6.2E-5 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 Gene3D G3DSA:2.60.40.10 391 450 6.6E-25 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 Gene3D G3DSA:2.60.40.10 501 567 2.2E-24 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 SUPERFAMILY SSF117074 371 465 3.27E-21 T 23-04-2016 SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 213 357 6.3E-25 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS00480 16a6e0d8d8efc105752772b04f6aebb3 695 PANTHER PTHR23303 373 603 7.4E-32 T 23-04-2016 SHYC_RS10470 52af5b01960e98634d4130457ffe0cb9 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 7.2E-5 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHYC_RS10470 52af5b01960e98634d4130457ffe0cb9 185 SUPERFAMILY SSF46689 5 67 6.48E-12 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS10470 52af5b01960e98634d4130457ffe0cb9 185 Gene3D G3DSA:1.10.357.10 3 176 2.5E-14 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHYC_RS10470 52af5b01960e98634d4130457ffe0cb9 185 PANTHER PTHR30055:SF55 9 178 5.2E-19 T 23-04-2016 SHYC_RS10470 52af5b01960e98634d4130457ffe0cb9 185 PANTHER PTHR30055 9 178 5.2E-19 T 23-04-2016 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 PIRSF PIRSF000414 1 492 5.7E-194 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 Gene3D G3DSA:3.40.140.20 221 337 1.2E-47 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 SUPERFAMILY SSF53927 192 492 3.41E-119 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 Gene3D G3DSA:3.40.140.20 343 482 2.4E-50 T 23-04-2016 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 PANTHER PTHR11692 1 492 5.0E-272 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 SMART SM00851 13 128 5.2E-52 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 Pfam PF01808 AICARFT/IMPCHase bienzyme 133 425 5.6E-108 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 SMART SM00798 133 427 2.7E-174 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 Gene3D G3DSA:3.40.50.1380 1 184 7.2E-80 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 Pfam PF02142 MGS-like domain 13 128 7.9E-27 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 2 492 1.3E-191 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 1 492 40.849 T 23-04-2016 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074|UniPathway: UPA00074 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 PANTHER PTHR11692:SF2 1 492 5.0E-272 T 23-04-2016 SHYC_RS08715 8acc1270346f9ab1a616f5a79725ee62 492 SUPERFAMILY SSF52335 2 190 2.44E-66 T 23-04-2016 IPR011607 Methylglyoxal synthase-like domain SHYC_RS02885 bd04cd20b536d58cc4a6c1404c9f3956 124 PIRSF PIRSF016789 1 122 2.3E-39 T 23-04-2016 IPR007401 Protein of unknown function DUF454 SHYC_RS02885 bd04cd20b536d58cc4a6c1404c9f3956 124 PANTHER PTHR35813:SF1 1 124 2.0E-38 T 23-04-2016 SHYC_RS02885 bd04cd20b536d58cc4a6c1404c9f3956 124 Pfam PF04304 Protein of unknown function (DUF454) 2 113 2.2E-34 T 23-04-2016 IPR007401 Protein of unknown function DUF454 SHYC_RS02885 bd04cd20b536d58cc4a6c1404c9f3956 124 PANTHER PTHR35813 1 124 2.0E-38 T 23-04-2016 SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 SUPERFAMILY SSF46997 244 293 5.23E-6 T 23-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 SUPERFAMILY SSF46997 54 111 1.26E-8 T 23-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 Pfam PF11621 C3 binding domain 4 of IgG-bind protein SBI 711 764 9.4E-13 T 23-04-2016 IPR021657 Immunoglobulin-binding protein Sbi, domain IV SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 Pfam PF02216 B domain 57 105 1.1E-10 T 23-04-2016 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 Pfam PF02216 B domain 290 342 1.8E-5 T 23-04-2016 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 Pfam PF02216 B domain 109 157 7.3E-11 T 23-04-2016 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 Pfam PF02216 B domain 244 286 2.4E-8 T 23-04-2016 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 Gene3D G3DSA:1.20.5.420 244 293 8.2E-8 T 23-04-2016 SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 Gene3D G3DSA:1.20.5.420 115 157 2.9E-8 T 23-04-2016 SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 Gene3D G3DSA:1.20.5.420 60 112 2.7E-9 T 23-04-2016 SHYC_RS00625 7a0a3858fcbefabcfd114fc8ea460058 955 SUPERFAMILY SSF46997 115 160 1.54E-8 T 23-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 SHYC_RS00270 c07f05cbb6419bb4e5ad319e941dca3e 230 Gene3D G3DSA:3.10.180.10 2 96 3.8E-4 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 Pfam PF12848 ABC transporter 236 320 5.5E-22 T 23-04-2016 IPR032781 ABC-transporter extension domain SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 ProSitePatterns PS00211 ABC transporters family signature. 447 461 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 SMART SM00382 28 240 2.2E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 SMART SM00382 354 519 4.3E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 PANTHER PTHR19211:SF64 1 576 0.0 T 23-04-2016 SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 Pfam PF00005 ABC transporter 20 195 4.3E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 Pfam PF00005 ABC transporter 348 475 3.7E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 PANTHER PTHR19211 1 576 0.0 T 23-04-2016 SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 SUPERFAMILY SSF52540 318 532 1.02E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 Gene3D G3DSA:3.40.50.300 329 546 3.3E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 Gene3D G3DSA:3.40.50.300 3 90 1.3E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 Gene3D G3DSA:3.40.50.300 128 281 1.3E-54 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 Pfam PF16326 ABC transporter C-terminal domain 574 638 4.2E-9 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SHYC_RS03965 1d01a970a728ddbced163709b3500b16 646 SUPERFAMILY SSF52540 4 248 1.95E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07845 b09c7872f1002981a68848129a353868 392 SUPERFAMILY SSF69705 4 126 3.4E-39 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 Gene3D G3DSA:3.30.300.20 199 277 2.8E-35 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta SHYC_RS07845 b09c7872f1002981a68848129a353868 392 Gene3D G3DSA:3.30.300.20 278 346 2.1E-33 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta SHYC_RS07845 b09c7872f1002981a68848129a353868 392 Gene3D G3DSA:2.40.50.140 129 198 1.1E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS07845 b09c7872f1002981a68848129a353868 392 SUPERFAMILY SSF54814 200 278 2.35E-29 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 SUPERFAMILY SSF50249 133 199 3.05E-15 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS07845 b09c7872f1002981a68848129a353868 392 SMART SM00316 134 200 8.3E-5 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 3 385 29.72 T 23-04-2016 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 Pfam PF13184 NusA-like KH domain 230 297 5.5E-28 T 23-04-2016 IPR025249 KH domain, NusA-like GO:0003723 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 PANTHER PTHR22648 2 381 2.6E-154 T 23-04-2016 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 PANTHER PTHR22648:SF0 2 381 2.6E-154 T 23-04-2016 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 SUPERFAMILY SSF54814 279 343 1.44E-16 T 23-04-2016 IPR009019 K homology domain, prokaryotic type GO:0003723 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 Pfam PF08529 NusA N-terminal domain 5 125 1.1E-38 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 6 342 1.6E-124 T 23-04-2016 IPR010213 Transcription termination factor NusA GO:0003723 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 Gene3D G3DSA:3.30.1480.10 3 125 1.5E-43 T 23-04-2016 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 SMART SM00322 303 386 1.1 T 23-04-2016 IPR004087 K Homology domain GO:0003676 SHYC_RS07845 b09c7872f1002981a68848129a353868 392 SMART SM00322 230 302 0.045 T 23-04-2016 IPR004087 K Homology domain GO:0003676 SHYC_RS02825 027515a33110be8cbf03d44eff866783 318 PANTHER PTHR10996 1 317 3.9E-184 T 23-04-2016 SHYC_RS02825 027515a33110be8cbf03d44eff866783 318 SUPERFAMILY SSF52283 1 137 2.84E-34 T 23-04-2016 SHYC_RS02825 027515a33110be8cbf03d44eff866783 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 285 9.9E-59 T 23-04-2016 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 SHYC_RS02825 027515a33110be8cbf03d44eff866783 318 PANTHER PTHR10996:SF154 1 317 3.9E-184 T 23-04-2016 SHYC_RS02825 027515a33110be8cbf03d44eff866783 318 Gene3D G3DSA:3.40.50.720 2 112 4.8E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02825 027515a33110be8cbf03d44eff866783 318 SUPERFAMILY SSF51735 99 285 1.68E-55 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02825 027515a33110be8cbf03d44eff866783 318 Gene3D G3DSA:3.40.50.720 113 285 9.4E-62 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02825 027515a33110be8cbf03d44eff866783 318 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 317 6.8E-33 T 23-04-2016 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 SHYC_RS08760 0160367a37feab4a10c41ffd33a2cd2a 160 PANTHER PTHR23046 2 160 5.9E-79 T 23-04-2016 SHYC_RS08760 0160367a37feab4a10c41ffd33a2cd2a 160 SUPERFAMILY SSF52255 2 159 9.16E-65 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SHYC_RS08760 0160367a37feab4a10c41ffd33a2cd2a 160 SMART SM01001 1 152 4.5E-96 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SHYC_RS08760 0160367a37feab4a10c41ffd33a2cd2a 160 Pfam PF00731 AIR carboxylase 2 148 1.5E-62 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SHYC_RS08760 0160367a37feab4a10c41ffd33a2cd2a 160 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 159 4.7E-63 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SHYC_RS08760 0160367a37feab4a10c41ffd33a2cd2a 160 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 31.626 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SHYC_RS08760 0160367a37feab4a10c41ffd33a2cd2a 160 PIRSF PIRSF001338 1 160 2.9E-68 T 23-04-2016 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE GO:0006189|GO:0034023 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234|UniPathway: UPA00074 SHYC_RS08760 0160367a37feab4a10c41ffd33a2cd2a 160 PANTHER PTHR23046:SF2 2 160 5.9E-79 T 23-04-2016 SHYC_RS08760 0160367a37feab4a10c41ffd33a2cd2a 160 Gene3D G3DSA:3.40.50.7700 2 159 7.3E-73 T 23-04-2016 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain GO:0006189 SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 SUPERFAMILY SSF48371 284 371 2.35E-9 T 23-04-2016 IPR016024 Armadillo-type fold GO:0005488 SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 Gene3D G3DSA:3.30.70.20 186 258 8.0E-8 T 23-04-2016 SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 PANTHER PTHR30002:SF4 1 365 1.2E-168 T 23-04-2016 SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 SUPERFAMILY SSF54862 164 261 4.6E-15 T 23-04-2016 SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 3.4E-16 T 23-04-2016 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 Pfam PF13646 HEAT repeats 299 349 2.2E-6 T 23-04-2016 SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 Pfam PF13484 4Fe-4S double cluster binding domain 188 250 3.5E-15 T 23-04-2016 SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 Gene3D G3DSA:1.25.10.10 298 368 2.1E-7 T 23-04-2016 IPR011989 Armadillo-like helical SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 341 2.3E-121 T 23-04-2016 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700|UniPathway: UPA00392 SHYC_RS04595 680118a741902f2dcd2efeb6dc3e025e 375 PANTHER PTHR30002 1 365 1.2E-168 T 23-04-2016 SHYC_RS07360 53aedca661ab50102bbf32161c96b176 62 Gene3D G3DSA:3.30.429.20 1 61 8.7E-25 T 23-04-2016 SHYC_RS07360 53aedca661ab50102bbf32161c96b176 62 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 57 6.8E-21 T 23-04-2016 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 SHYC_RS07360 53aedca661ab50102bbf32161c96b176 62 SUPERFAMILY SSF55331 2 60 2.62E-17 T 23-04-2016 IPR014347 Tautomerase/MIF superfamily SHYC_RS07360 53aedca661ab50102bbf32161c96b176 62 PANTHER PTHR35530 1 61 2.0E-19 T 23-04-2016 SHYC_RS07360 53aedca661ab50102bbf32161c96b176 62 PANTHER PTHR35530:SF1 1 61 2.0E-19 T 23-04-2016 SHYC_RS07360 53aedca661ab50102bbf32161c96b176 62 Pfam PF01361 Tautomerase enzyme 2 60 2.8E-22 T 23-04-2016 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 SHYC_RS09350 2774057f3b079bf572afe16a64d534e7 108 Gene3D G3DSA:3.40.30.30 3 106 1.3E-46 T 23-04-2016 IPR009190 Protein of unknown function DUF1462 SHYC_RS09350 2774057f3b079bf572afe16a64d534e7 108 SUPERFAMILY SSF52833 2 105 6.04E-44 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09350 2774057f3b079bf572afe16a64d534e7 108 PIRSF PIRSF010603 1 107 3.0E-42 T 23-04-2016 IPR009190 Protein of unknown function DUF1462 SHYC_RS09350 2774057f3b079bf572afe16a64d534e7 108 Pfam PF07315 Protein of unknown function (DUF1462) 7 101 4.3E-40 T 23-04-2016 IPR009190 Protein of unknown function DUF1462 SHYC_RS09540 b283c5cdd85ed0d23ccedfc9ce25ee0e 246 Pfam PF12146 Serine aminopeptidase, S33 158 226 2.2E-7 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 SHYC_RS09540 b283c5cdd85ed0d23ccedfc9ce25ee0e 246 Pfam PF12146 Serine aminopeptidase, S33 15 123 2.0E-9 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 SHYC_RS09540 b283c5cdd85ed0d23ccedfc9ce25ee0e 246 PIRSF PIRSF017388 1 244 4.6E-86 T 23-04-2016 IPR012354 Esterase/lipase GO:0052689 SHYC_RS09540 b283c5cdd85ed0d23ccedfc9ce25ee0e 246 PANTHER PTHR11614 3 244 5.2E-83 T 23-04-2016 SHYC_RS09540 b283c5cdd85ed0d23ccedfc9ce25ee0e 246 PANTHER PTHR11614:SF89 3 244 5.2E-83 T 23-04-2016 SHYC_RS09540 b283c5cdd85ed0d23ccedfc9ce25ee0e 246 SUPERFAMILY SSF53474 13 243 7.05E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS09540 b283c5cdd85ed0d23ccedfc9ce25ee0e 246 Gene3D G3DSA:3.40.50.1820 13 242 7.0E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS05820 4342fa105b9a36ec82027ee7f8417866 148 PANTHER PTHR33797:SF1 1 148 5.1E-35 T 23-04-2016 SHYC_RS05820 4342fa105b9a36ec82027ee7f8417866 148 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 4 142 3.3E-52 T 23-04-2016 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes SHYC_RS05820 4342fa105b9a36ec82027ee7f8417866 148 PANTHER PTHR33797 1 148 5.1E-35 T 23-04-2016 SHYC_RS05820 4342fa105b9a36ec82027ee7f8417866 148 Pfam PF02566 OsmC-like protein 39 142 9.0E-21 T 23-04-2016 IPR003718 OsmC/Ohr family SHYC_RS05820 4342fa105b9a36ec82027ee7f8417866 148 Gene3D G3DSA:3.30.300.20 1 142 1.1E-34 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta SHYC_RS05820 4342fa105b9a36ec82027ee7f8417866 148 SUPERFAMILY SSF82784 2 143 2.49E-32 T 23-04-2016 IPR003718 OsmC/Ohr family SHYC_RS08480 43a2e7644fd0077dfddde487f6c408b3 303 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 47 292 1.1E-26 T 23-04-2016 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 SHYC_RS08480 43a2e7644fd0077dfddde487f6c408b3 303 Gene3D G3DSA:3.20.20.190 39 301 4.3E-55 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SHYC_RS08480 43a2e7644fd0077dfddde487f6c408b3 303 PANTHER PTHR23344 38 303 4.6E-57 T 23-04-2016 IPR004129 Glycerophosphoryl diester phosphodiesterase GO:0008889 SHYC_RS08480 43a2e7644fd0077dfddde487f6c408b3 303 SUPERFAMILY SSF51695 41 298 5.49E-53 T 23-04-2016 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 SHYC_RS08480 43a2e7644fd0077dfddde487f6c408b3 303 PANTHER PTHR23344:SF28 38 303 4.6E-57 T 23-04-2016 SHYC_RS03115 ff91020a214c364d71015914d9bd0b0f 105 Pfam PF00467 KOW motif 5 36 3.1E-9 T 23-04-2016 IPR005824 KOW SHYC_RS03115 ff91020a214c364d71015914d9bd0b0f 105 SMART SM00739 2 29 1.6E-6 T 23-04-2016 IPR005824 KOW SHYC_RS03115 ff91020a214c364d71015914d9bd0b0f 105 SUPERFAMILY SSF50104 1 99 1.28E-38 T 23-04-2016 IPR008991 Translation protein SH3-like domain SHYC_RS03115 ff91020a214c364d71015914d9bd0b0f 105 Gene3D G3DSA:2.30.30.30 1 90 7.2E-29 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 SHYC_RS03115 ff91020a214c364d71015914d9bd0b0f 105 PANTHER PTHR12903 1 101 2.0E-52 T 23-04-2016 SHYC_RS03115 ff91020a214c364d71015914d9bd0b0f 105 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 3.9E-40 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03115 ff91020a214c364d71015914d9bd0b0f 105 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 23-04-2016 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03115 ff91020a214c364d71015914d9bd0b0f 105 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 1.3E-31 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03115 ff91020a214c364d71015914d9bd0b0f 105 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 22.829 T 23-04-2016 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03350 c0c91e6d289d40a3505f23f45c2f5d7c 167 PANTHER PTHR35531 1 166 1.2E-35 T 23-04-2016 SHYC_RS03350 c0c91e6d289d40a3505f23f45c2f5d7c 167 PANTHER PTHR35531:SF1 1 166 1.2E-35 T 23-04-2016 SHYC_RS03350 c0c91e6d289d40a3505f23f45c2f5d7c 167 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 155 4.3E-32 T 23-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase SHYC_RS03010 3b500757502a025ca09c5dbcc9dd1340 416 Pfam PF02388 FemAB family 6 397 7.0E-76 T 23-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 SHYC_RS03010 3b500757502a025ca09c5dbcc9dd1340 416 Gene3D G3DSA:3.40.630.30 296 374 6.9E-56 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03010 3b500757502a025ca09c5dbcc9dd1340 416 Gene3D G3DSA:3.40.630.30 156 234 6.9E-56 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03010 3b500757502a025ca09c5dbcc9dd1340 416 SUPERFAMILY SSF55729 297 395 8.48E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03010 3b500757502a025ca09c5dbcc9dd1340 416 SUPERFAMILY SSF55729 156 235 8.48E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03010 3b500757502a025ca09c5dbcc9dd1340 416 PANTHER PTHR36174 1 414 1.7E-152 T 23-04-2016 SHYC_RS03010 3b500757502a025ca09c5dbcc9dd1340 416 SUPERFAMILY SSF55729 1 153 5.03E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03010 3b500757502a025ca09c5dbcc9dd1340 416 PANTHER PTHR36174:SF1 1 414 1.7E-152 T 23-04-2016 SHYC_RS03010 3b500757502a025ca09c5dbcc9dd1340 416 Gene3D G3DSA:3.40.630.30 1 155 5.8E-48 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 SUPERFAMILY SSF55124 510 617 1.44E-24 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 Gene3D G3DSA:3.50.50.60 105 305 8.3E-49 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 671 687 - T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 Gene3D G3DSA:3.30.413.10 625 759 1.8E-35 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 4.0E-19 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.0E-19 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 4.0E-19 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 4.0E-19 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 4.0E-19 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PIRSF PIRSF037149 1 800 0.0 T 23-04-2016 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 554 616 5.6E-11 T 23-04-2016 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 SUPERFAMILY SSF51905 2 192 7.78E-43 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 SUPERFAMILY SSF56014 627 792 9.55E-47 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.5E-11 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 3.5E-11 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 3.5E-11 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.5E-11 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00397 Sirohaem Fe-binding site signature 671 689 5.9E-6 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PRINTS PR00397 Sirohaem Fe-binding site signature 628 646 5.9E-6 T 23-04-2016 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PANTHER PTHR22912:SF1 1 412 1.1E-152 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 283 2.9E-57 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 Pfam PF04324 BFD-like [2Fe-2S] binding domain 479 529 3.1E-11 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 Pfam PF04324 BFD-like [2Fe-2S] binding domain 415 464 1.9E-17 T 23-04-2016 IPR007419 BFD-like [2Fe-2S]-binding domain SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 Gene3D G3DSA:3.50.50.60 2 104 1.2E-24 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 624 761 3.3E-25 T 23-04-2016 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683|UniPathway: UPA00140 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 PANTHER PTHR22912 1 412 1.1E-152 T 23-04-2016 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 789 2.8E-281 T 23-04-2016 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 UniPathway: UPA00653 SHYC_RS02365 2bfc0595b320573528812495822c1fb3 801 SUPERFAMILY SSF51905 142 306 7.28E-30 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS07920 59de34f2783d00d39be64b8a88883e40 296 Gene3D G3DSA:1.10.443.10 111 285 9.8E-54 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS07920 59de34f2783d00d39be64b8a88883e40 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 1 292 32.962 T 23-04-2016 IPR023009 Tyrosine recombinase XerC/XerD SHYC_RS07920 59de34f2783d00d39be64b8a88883e40 296 PANTHER PTHR30349 4 294 4.9E-150 T 23-04-2016 SHYC_RS07920 59de34f2783d00d39be64b8a88883e40 296 SUPERFAMILY SSF56349 105 290 1.59E-52 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHYC_RS07920 59de34f2783d00d39be64b8a88883e40 296 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 294 1.1E-104 T 23-04-2016 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 SHYC_RS07920 59de34f2783d00d39be64b8a88883e40 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 84 6.4E-16 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SHYC_RS07920 59de34f2783d00d39be64b8a88883e40 296 Pfam PF00589 Phage integrase family 110 278 3.2E-45 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS07920 59de34f2783d00d39be64b8a88883e40 296 PANTHER PTHR30349:SF38 4 294 4.9E-150 T 23-04-2016 SHYC_RS07920 59de34f2783d00d39be64b8a88883e40 296 SUPERFAMILY SSF47823 7 97 1.29E-18 T 23-04-2016 IPR010998 Integrase, Lambda-type, N-terminal SHYC_RS07920 59de34f2783d00d39be64b8a88883e40 296 Gene3D G3DSA:1.10.150.130 6 96 1.0E-23 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal SHYC_RS09285 77a462520f3619615a588c29d37c3de1 115 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 1.6E-31 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SHYC_RS09285 77a462520f3619615a588c29d37c3de1 115 PANTHER PTHR34583:SF2 1 115 3.3E-44 T 23-04-2016 SHYC_RS09285 77a462520f3619615a588c29d37c3de1 115 PANTHER PTHR34583 1 115 3.3E-44 T 23-04-2016 SHYC_RS01215 a92a5b0674d0a408a2c3c042e004951d 355 Gene3D G3DSA:3.40.630.10 2 171 2.2E-57 T 23-04-2016 SHYC_RS01215 a92a5b0674d0a408a2c3c042e004951d 355 Gene3D G3DSA:3.40.630.10 297 354 2.2E-57 T 23-04-2016 SHYC_RS01215 a92a5b0674d0a408a2c3c042e004951d 355 SUPERFAMILY SSF53187 272 354 8.75E-51 T 23-04-2016 SHYC_RS01215 a92a5b0674d0a408a2c3c042e004951d 355 SUPERFAMILY SSF53187 3 162 8.75E-51 T 23-04-2016 SHYC_RS01215 a92a5b0674d0a408a2c3c042e004951d 355 Gene3D G3DSA:3.30.70.360 172 259 1.2E-24 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS01215 a92a5b0674d0a408a2c3c042e004951d 355 PANTHER PTHR11014 6 354 1.6E-74 T 23-04-2016 SHYC_RS01215 a92a5b0674d0a408a2c3c042e004951d 355 Pfam PF07687 Peptidase dimerisation domain 161 258 2.6E-20 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS01215 a92a5b0674d0a408a2c3c042e004951d 355 SUPERFAMILY SSF55031 163 260 4.64E-19 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS01215 a92a5b0674d0a408a2c3c042e004951d 355 Pfam PF01546 Peptidase family M20/M25/M40 63 352 2.6E-34 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS04400 1aeb2d2ceb2e11dd33a8e06182b49e65 181 PANTHER PTHR39159:SF1 2 179 1.9E-71 T 23-04-2016 SHYC_RS04400 1aeb2d2ceb2e11dd33a8e06182b49e65 181 PIRSF PIRSF028345 4 181 4.8E-79 T 23-04-2016 IPR016882 Uncharacterised protein family UPF0374 SHYC_RS04400 1aeb2d2ceb2e11dd33a8e06182b49e65 181 Gene3D G3DSA:2.40.380.10 7 172 1.3E-54 T 23-04-2016 IPR007295 Domain of unknown function DUF402 SHYC_RS04400 1aeb2d2ceb2e11dd33a8e06182b49e65 181 Pfam PF04167 Protein of unknown function (DUF402) 63 127 8.4E-18 T 23-04-2016 IPR007295 Domain of unknown function DUF402 SHYC_RS04400 1aeb2d2ceb2e11dd33a8e06182b49e65 181 SUPERFAMILY SSF159234 6 172 1.22E-33 T 23-04-2016 SHYC_RS04400 1aeb2d2ceb2e11dd33a8e06182b49e65 181 Hamap MF_01568 UPF0374 protein . 4 178 50.288 T 23-04-2016 IPR016882 Uncharacterised protein family UPF0374 SHYC_RS04400 1aeb2d2ceb2e11dd33a8e06182b49e65 181 PANTHER PTHR39159 2 179 1.9E-71 T 23-04-2016 SHYC_RS06975 3d4d984580ac6a3cdff7c36d9fb76d02 236 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 140 154 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SHYC_RS06975 3d4d984580ac6a3cdff7c36d9fb76d02 236 PANTHER PTHR10108 8 236 6.6E-118 T 23-04-2016 SHYC_RS06975 3d4d984580ac6a3cdff7c36d9fb76d02 236 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 232 36.866 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SHYC_RS06975 3d4d984580ac6a3cdff7c36d9fb76d02 236 PANTHER PTHR10108:SF928 8 236 6.6E-118 T 23-04-2016 SHYC_RS06975 3d4d984580ac6a3cdff7c36d9fb76d02 236 SUPERFAMILY SSF53335 4 232 3.22E-48 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS06975 3d4d984580ac6a3cdff7c36d9fb76d02 236 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 10 232 7.1E-86 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SHYC_RS06975 3d4d984580ac6a3cdff7c36d9fb76d02 236 Gene3D G3DSA:3.40.50.150 8 226 1.9E-55 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS06975 3d4d984580ac6a3cdff7c36d9fb76d02 236 Pfam PF01209 ubiE/COQ5 methyltransferase family 4 232 7.5E-96 T 23-04-2016 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SHYC_RS06975 3d4d984580ac6a3cdff7c36d9fb76d02 236 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 21 36 - T 23-04-2016 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|UniPathway: UPA00079 SHYC_RS05845 fedc97ad87f2fb33b3de47c16ad5468f 567 Pfam PF06160 Septation ring formation regulator, EzrA 5 560 6.4E-154 T 23-04-2016 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 SHYC_RS05845 fedc97ad87f2fb33b3de47c16ad5468f 567 PANTHER PTHR41314 1 567 1.8E-174 T 23-04-2016 SHYC_RS05670 04ab81fd5f08325820d23bf5cbcf7d02 546 PANTHER PTHR30250:SF6 1 541 4.2E-116 T 23-04-2016 SHYC_RS05670 04ab81fd5f08325820d23bf5cbcf7d02 546 Pfam PF01943 Polysaccharide biosynthesis protein 7 325 3.8E-24 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 SHYC_RS05670 04ab81fd5f08325820d23bf5cbcf7d02 546 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 378 525 8.9E-25 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain SHYC_RS05670 04ab81fd5f08325820d23bf5cbcf7d02 546 PIRSF PIRSF038958 2 540 1.6E-91 T 23-04-2016 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type SHYC_RS05670 04ab81fd5f08325820d23bf5cbcf7d02 546 PANTHER PTHR30250 1 541 4.2E-116 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 359 439 6.2E-29 T 23-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 PANTHER PTHR11938 135 144 7.5E-125 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 PANTHER PTHR11938:SF8 135 144 7.5E-125 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 Pfam PF13247 4Fe-4S dicluster domain 176 272 1.6E-36 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 PANTHER PTHR11938 1 31 7.5E-125 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 PANTHER PTHR11938 171 337 7.5E-125 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 PANTHER PTHR11938:SF8 1 31 7.5E-125 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 PANTHER PTHR11938:SF8 171 337 7.5E-125 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 Gene3D G3DSA:3.30.70.20 197 236 3.5E-25 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 482 6.4E-252 T 23-04-2016 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 Gene3D G3DSA:3.30.70.20 157 196 3.5E-11 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 Gene3D G3DSA:3.30.70.20 10 26 3.5E-11 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 Gene3D G3DSA:3.30.70.20 439 468 1.8E-72 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 Gene3D G3DSA:3.30.70.20 237 359 1.8E-72 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 SUPERFAMILY SSF54862 2 481 5.44E-159 T 23-04-2016 SHYC_RS02390 f0f9dd7b099c71f0b1c266899e12f6c1 518 Gene3D G3DSA:1.10.3650.10 360 437 8.2E-29 T 23-04-2016 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 SHYC_RS03205 c80f54fc133a0ee370b9133da550c073 289 PANTHER PTHR24220:SF66 4 250 2.2E-79 T 23-04-2016 SHYC_RS03205 c80f54fc133a0ee370b9133da550c073 289 PANTHER PTHR24220 4 250 2.2E-79 T 23-04-2016 SHYC_RS03205 c80f54fc133a0ee370b9133da550c073 289 SUPERFAMILY SSF52540 2 239 6.22E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03205 c80f54fc133a0ee370b9133da550c073 289 Pfam PF00005 ABC transporter 24 175 3.7E-26 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS03205 c80f54fc133a0ee370b9133da550c073 289 Gene3D G3DSA:3.40.50.300 2 229 2.5E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03205 c80f54fc133a0ee370b9133da550c073 289 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 278 2.0E-101 T 23-04-2016 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 SHYC_RS03205 c80f54fc133a0ee370b9133da550c073 289 SMART SM00382 32 224 3.7E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS09665 10bd11c670a8335f1aa10b3fc7051cc2 161 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SHYC_RS09665 10bd11c670a8335f1aa10b3fc7051cc2 161 SUPERFAMILY SSF51161 13 158 1.8E-34 T 23-04-2016 IPR011004 Trimeric LpxA-like SHYC_RS09665 10bd11c670a8335f1aa10b3fc7051cc2 161 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 142 1.3E-11 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS09665 10bd11c670a8335f1aa10b3fc7051cc2 161 PANTHER PTHR23416:SF69 17 158 1.7E-35 T 23-04-2016 SHYC_RS09665 10bd11c670a8335f1aa10b3fc7051cc2 161 PANTHER PTHR23416 17 158 1.7E-35 T 23-04-2016 SHYC_RS09665 10bd11c670a8335f1aa10b3fc7051cc2 161 Gene3D G3DSA:2.160.10.10 57 158 8.1E-29 T 23-04-2016 SHYC_RS00830 f680063acbf4415e1079f021af988188 231 PANTHER PTHR24567 8 224 7.0E-17 T 23-04-2016 SHYC_RS00830 f680063acbf4415e1079f021af988188 231 SUPERFAMILY SSF51206 28 138 4.45E-12 T 23-04-2016 IPR018490 Cyclic nucleotide-binding-like SHYC_RS00830 f680063acbf4415e1079f021af988188 231 Gene3D G3DSA:1.10.10.10 156 225 1.1E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00830 f680063acbf4415e1079f021af988188 231 Gene3D G3DSA:2.60.120.10 17 138 1.8E-8 T 23-04-2016 IPR014710 RmlC-like jelly roll fold SHYC_RS00830 f680063acbf4415e1079f021af988188 231 SUPERFAMILY SSF46785 156 225 9.75E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00945 ddbd75de844e7da02889229993a279c8 300 TIGRFAM TIGR03639 cas1_NMENI: CRISPR-associated endonuclease Cas1, subtype II/NMENI 3 276 7.4E-87 T 23-04-2016 IPR019855 CRISPR-associated protein Cas1, NMENI subtype SHYC_RS00945 ddbd75de844e7da02889229993a279c8 300 TIGRFAM TIGR00287 cas1: CRISPR-associated endonuclease Cas1 5 236 1.9E-25 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 SHYC_RS00945 ddbd75de844e7da02889229993a279c8 300 PANTHER PTHR34353 1 293 1.3E-28 T 23-04-2016 SHYC_RS00945 ddbd75de844e7da02889229993a279c8 300 Pfam PF01867 CRISPR associated protein Cas1 12 230 3.0E-25 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 SHYC_RS00945 ddbd75de844e7da02889229993a279c8 300 Hamap MF_01470 CRISPR-associated endonuclease Cas1 [cas1]. 4 292 13.61 T 23-04-2016 IPR002729 CRISPR-associated protein Cas1 SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 5 371 4.0E-98 T 23-04-2016 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 Pfam PF00271 Helicase conserved C-terminal domain 212 319 1.5E-18 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 PANTHER PTHR13710:SF84 2 346 7.9E-177 T 23-04-2016 SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 PANTHER PTHR13710:SF84 390 437 7.9E-177 T 23-04-2016 SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 SMART SM00490 238 319 1.0E-25 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 129 138 - T 23-04-2016 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site GO:0003676|GO:0005524|GO:0008026 SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 PANTHER PTHR13710 2 346 7.9E-177 T 23-04-2016 SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 PANTHER PTHR13710 390 437 7.9E-177 T 23-04-2016 SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 Pfam PF16124 RecQ zinc-binding 376 429 1.0E-5 T 23-04-2016 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 SUPERFAMILY SSF52540 54 338 1.4E-56 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 Pfam PF00270 DEAD/DEAH box helicase 17 175 1.7E-19 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 Gene3D G3DSA:3.40.50.300 2 187 2.7E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 Gene3D G3DSA:1.10.10.10 388 440 8.2E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 Gene3D G3DSA:3.40.50.300 193 355 1.5E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06925 c70f153ff3c84a29d13d7f060c33e704 458 SMART SM00487 11 205 4.5E-30 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS06785 381251dc233638965c0bff88c6cde861 300 PIRSF PIRSF000428 2 299 6.4E-62 T 23-04-2016 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SHYC_RS06785 381251dc233638965c0bff88c6cde861 300 Pfam PF01515 Phosphate acetyl/butaryl transferase 85 295 4.5E-37 T 23-04-2016 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SHYC_RS06785 381251dc233638965c0bff88c6cde861 300 SUPERFAMILY SSF53659 16 297 8.63E-42 T 23-04-2016 SHYC_RS06785 381251dc233638965c0bff88c6cde861 300 PANTHER PTHR23406:SF1 16 276 1.3E-16 T 23-04-2016 SHYC_RS06785 381251dc233638965c0bff88c6cde861 300 PANTHER PTHR23406 16 276 1.3E-16 T 23-04-2016 SHYC_RS06785 381251dc233638965c0bff88c6cde861 300 Gene3D G3DSA:3.40.50.10750 119 271 1.6E-40 T 23-04-2016 SHYC_RS09295 3dfc4ce2fd545ac57b331c65a65ad168 159 PANTHER PTHR34584:SF1 1 156 1.1E-48 T 23-04-2016 SHYC_RS09295 3dfc4ce2fd545ac57b331c65a65ad168 159 PANTHER PTHR34584 1 156 1.1E-48 T 23-04-2016 SHYC_RS09295 3dfc4ce2fd545ac57b331c65a65ad168 159 Pfam PF01899 Na+/H+ ion antiporter subunit 8 156 3.0E-41 T 23-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 SHYC_RS09295 3dfc4ce2fd545ac57b331c65a65ad168 159 PIRSF PIRSF019239 1 159 3.5E-43 T 23-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 SHYC_RS11760 8be2c5b4cfda3df36f4087104c315b9a 115 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 2 106 1.6E-28 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SHYC_RS11760 8be2c5b4cfda3df36f4087104c315b9a 115 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 114 2.0E-43 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SHYC_RS11760 8be2c5b4cfda3df36f4087104c315b9a 115 Gene3D G3DSA:3.30.230.10 1 113 8.2E-39 T 23-04-2016 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup SHYC_RS11760 8be2c5b4cfda3df36f4087104c315b9a 115 SUPERFAMILY SSF54211 1 113 7.33E-35 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS11760 8be2c5b4cfda3df36f4087104c315b9a 115 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 110 19.964 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SHYC_RS11760 8be2c5b4cfda3df36f4087104c315b9a 115 Pfam PF00825 Ribonuclease P 1 106 9.3E-33 T 23-04-2016 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 SHYC_RS11760 8be2c5b4cfda3df36f4087104c315b9a 115 PANTHER PTHR33992 1 112 5.6E-36 T 23-04-2016 SHYC_RS11760 8be2c5b4cfda3df36f4087104c315b9a 115 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 51 65 - T 23-04-2016 IPR020539 Ribonuclease P, conserved site GO:0004526 SHYC_RS01715 8485a80e7e6d23775af9a22dd6c8aa55 241 SUPERFAMILY SSF46955 4 119 3.41E-24 T 23-04-2016 IPR009061 Putative DNA-binding domain SHYC_RS01715 8485a80e7e6d23775af9a22dd6c8aa55 241 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 1.4E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHYC_RS01715 8485a80e7e6d23775af9a22dd6c8aa55 241 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 1.4E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHYC_RS01715 8485a80e7e6d23775af9a22dd6c8aa55 241 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 1.4E-6 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHYC_RS01715 8485a80e7e6d23775af9a22dd6c8aa55 241 SMART SM00422 4 73 4.0E-17 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHYC_RS01715 8485a80e7e6d23775af9a22dd6c8aa55 241 Pfam PF13411 MerR HTH family regulatory protein 4 72 3.7E-17 T 23-04-2016 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 SHYC_RS01715 8485a80e7e6d23775af9a22dd6c8aa55 241 Gene3D G3DSA:1.10.1660.10 3 58 3.5E-22 T 23-04-2016 SHYC_RS01715 8485a80e7e6d23775af9a22dd6c8aa55 241 PANTHER PTHR30204:SF5 1 238 4.5E-26 T 23-04-2016 SHYC_RS01715 8485a80e7e6d23775af9a22dd6c8aa55 241 Gene3D G3DSA:1.10.1660.10 59 116 1.9E-7 T 23-04-2016 SHYC_RS01715 8485a80e7e6d23775af9a22dd6c8aa55 241 PANTHER PTHR30204 1 238 4.5E-26 T 23-04-2016 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Gene3D G3DSA:3.40.50.300 697 725 2.4E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Gene3D G3DSA:3.40.50.300 494 663 2.4E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 SMART SM01086 714 803 2.1E-36 T 23-04-2016 IPR019489 Clp ATPase, C-terminal SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Gene3D G3DSA:3.40.50.300 162 343 3.5E-48 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Gene3D G3DSA:1.10.1780.10 3 147 3.4E-43 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Gene3D G3DSA:4.10.860.10 422 454 4.8E-4 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 SUPERFAMILY SSF52540 161 467 4.68E-79 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 SMART SM00382 200 344 1.1E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 SMART SM00382 537 715 1.1E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Gene3D G3DSA:1.10.8.60 344 421 3.3E-36 T 23-04-2016 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 SUPERFAMILY SSF52540 486 799 2.29E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Pfam PF07724 AAA domain (Cdc48 subfamily) 536 707 6.3E-56 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 2.1E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 541 559 2.1E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 586 604 2.1E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 662 2.1E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Pfam PF02151 UvrB/uvrC motif 417 452 1.6E-5 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 PANTHER PTHR11638 1 824 0.0 T 23-04-2016 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 334 5.4E-14 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 6.5E-17 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 2.2E-14 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 PANTHER PTHR11638:SF18 1 824 0.0 T 23-04-2016 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Gene3D G3DSA:1.10.8.60 726 813 1.4E-31 T 23-04-2016 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 714 794 1.8E-26 T 23-04-2016 IPR019489 Clp ATPase, C-terminal SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 571 589 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 SHYC_RS10755 7a687532fc8ba0910155fd551f67bdaf 825 SUPERFAMILY SSF81923 5 152 1.57E-30 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 SHYC_RS05655 65b839cd493c4c44fcbe769c3ef3d0ef 103 SUPERFAMILY SSF52821 2 99 5.5E-27 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS05655 65b839cd493c4c44fcbe769c3ef3d0ef 103 Pfam PF00581 Rhodanese-like domain 5 95 1.0E-10 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS05655 65b839cd493c4c44fcbe769c3ef3d0ef 103 Gene3D G3DSA:3.40.250.10 1 99 3.1E-26 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS05655 65b839cd493c4c44fcbe769c3ef3d0ef 103 SMART SM00450 5 99 1.7E-15 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS03485 ffe56590cf0b1ff68d45e4e3896ac325 455 Pfam PF01878 EVE domain 166 270 3.4E-7 T 23-04-2016 IPR002740 EVE domain SHYC_RS03485 ffe56590cf0b1ff68d45e4e3896ac325 455 Gene3D G3DSA:3.10.590.10 151 269 2.2E-4 T 23-04-2016 IPR002740 EVE domain SHYC_RS03485 ffe56590cf0b1ff68d45e4e3896ac325 455 Gene3D G3DSA:3.40.50.300 313 440 4.4E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03485 ffe56590cf0b1ff68d45e4e3896ac325 455 SUPERFAMILY SSF88697 142 277 1.7E-17 T 23-04-2016 IPR015947 PUA-like domain SHYC_RS03485 ffe56590cf0b1ff68d45e4e3896ac325 455 SUPERFAMILY SSF88697 6 132 1.33E-12 T 23-04-2016 IPR015947 PUA-like domain SHYC_RS03485 ffe56590cf0b1ff68d45e4e3896ac325 455 SUPERFAMILY SSF52540 326 451 6.07E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 Pfam PF00344 SecY translocase 48 364 5.2E-40 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 SUPERFAMILY SSF103491 1 372 1.83E-54 T 23-04-2016 IPR023201 SecY subunit domain SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 PIRSF PIRSF004557 1 385 1.0E-57 T 23-04-2016 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: REACT_15380 SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 Gene3D G3DSA:1.10.3370.10 1 384 5.9E-52 T 23-04-2016 IPR023201 SecY subunit domain SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 PRINTS PR00303 Preprotein translocase SecY subunit signature 46 66 1.8E-16 T 23-04-2016 SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 334 1.8E-16 T 23-04-2016 SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 PRINTS PR00303 Preprotein translocase SecY subunit signature 220 239 1.8E-16 T 23-04-2016 SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 PRINTS PR00303 Preprotein translocase SecY subunit signature 261 283 1.8E-16 T 23-04-2016 SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 PRINTS PR00303 Preprotein translocase SecY subunit signature 350 368 1.8E-16 T 23-04-2016 SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 PRINTS PR00303 Preprotein translocase SecY subunit signature 113 138 1.8E-16 T 23-04-2016 SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 Hamap MF_01466 Accessory Sec system protein translocase subunit SecY2 [secY2]. 1 381 24.702 T 23-04-2016 IPR014269 Accessory Sec system protein translocase subunit SecY2 SHYC_RS01055 76d050a5fb90f9f3489c5bb9c86b50e0 385 TIGRFAM TIGR02920 acc_sec_Y2: accessory Sec system translocase SecY2 1 381 1.4E-127 T 23-04-2016 IPR014269 Accessory Sec system protein translocase subunit SecY2 SHYC_RS06910 3dd475762340a03a0195714072a60625 182 Pfam PF12822 Protein of unknown function (DUF3816) 7 173 2.2E-28 T 23-04-2016 IPR024529 ECF transporter, substrate-specific component GO:0005215 SHYC_RS06910 3dd475762340a03a0195714072a60625 182 PIRSF PIRSF037778 2 182 3.4E-48 T 23-04-2016 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 SHYC_RS06910 3dd475762340a03a0195714072a60625 182 PANTHER PTHR38438 2 182 2.0E-58 T 23-04-2016 SHYC_RS06910 3dd475762340a03a0195714072a60625 182 PANTHER PTHR38438:SF1 2 182 2.0E-58 T 23-04-2016 SHYC_RS02520 4fad84f32c41bd5edef5eda0bcf920dc 171 PANTHER PTHR23091 1 171 3.3E-34 T 23-04-2016 SHYC_RS02520 4fad84f32c41bd5edef5eda0bcf920dc 171 PANTHER PTHR23091:SF257 1 171 3.3E-34 T 23-04-2016 SHYC_RS02520 4fad84f32c41bd5edef5eda0bcf920dc 171 SUPERFAMILY SSF55729 1 165 1.41E-30 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS02520 4fad84f32c41bd5edef5eda0bcf920dc 171 Pfam PF13673 Acetyltransferase (GNAT) domain 30 156 2.2E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS02520 4fad84f32c41bd5edef5eda0bcf920dc 171 Gene3D G3DSA:3.40.630.30 1 160 2.1E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS01435 ea95152969f7bd3a4999f35037f38c07 118 SUPERFAMILY SSF53955 48 79 1.45E-5 T 23-04-2016 IPR023346 Lysozyme-like domain SHYC_RS01435 ea95152969f7bd3a4999f35037f38c07 118 Gene3D G3DSA:1.10.530.10 42 81 2.0E-5 T 23-04-2016 SHYC_RS00715 745372a5ca523bb24846b6eb4bc6a9f9 235 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 64 79 - T 23-04-2016 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SHYC_RS00715 745372a5ca523bb24846b6eb4bc6a9f9 235 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 13 233 7.4E-88 T 23-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SHYC_RS00715 745372a5ca523bb24846b6eb4bc6a9f9 235 PANTHER PTHR21234 1 235 1.7E-63 T 23-04-2016 IPR018017 Nucleoside phosphorylase SHYC_RS00715 745372a5ca523bb24846b6eb4bc6a9f9 235 Pfam PF01048 Phosphorylase superfamily 19 213 9.3E-39 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHYC_RS00715 745372a5ca523bb24846b6eb4bc6a9f9 235 PANTHER PTHR21234:SF8 1 235 1.7E-63 T 23-04-2016 SHYC_RS00715 745372a5ca523bb24846b6eb4bc6a9f9 235 Gene3D G3DSA:3.40.50.1580 14 233 1.1E-78 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHYC_RS00715 745372a5ca523bb24846b6eb4bc6a9f9 235 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 3 235 39.859 T 23-04-2016 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 SHYC_RS00715 745372a5ca523bb24846b6eb4bc6a9f9 235 SUPERFAMILY SSF53167 5 234 1.96E-86 T 23-04-2016 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 SHYC_RS02580 e2bd5f43f9f01ed8f059c1db80fde04b 185 SUPERFAMILY SSF46689 9 73 1.8E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS02580 e2bd5f43f9f01ed8f059c1db80fde04b 185 Gene3D G3DSA:1.10.357.10 13 118 6.3E-15 T 23-04-2016 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal GO:0003677 SHYC_RS02580 e2bd5f43f9f01ed8f059c1db80fde04b 185 PANTHER PTHR30328 1 180 9.5E-17 T 23-04-2016 SHYC_RS02580 e2bd5f43f9f01ed8f059c1db80fde04b 185 PANTHER PTHR30328:SF20 1 180 9.5E-17 T 23-04-2016 SHYC_RS02580 e2bd5f43f9f01ed8f059c1db80fde04b 185 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 63 3.8E-8 T 23-04-2016 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 SMART SM00382 343 521 3.5E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 SMART SM00382 28 231 3.0E-9 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 SUPERFAMILY SSF52540 9 240 7.46E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 Pfam PF16326 ABC transporter C-terminal domain 556 621 5.1E-10 T 23-04-2016 IPR032524 ABC transporter Uup, C-terminal GO:0003677 SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 Pfam PF12848 ABC transporter 225 300 1.5E-11 T 23-04-2016 IPR032781 ABC-transporter extension domain SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 Gene3D G3DSA:3.40.50.300 4 270 1.5E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 Gene3D G3DSA:3.40.50.300 317 544 2.0E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 Pfam PF00005 ABC transporter 20 186 1.4E-25 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 Pfam PF00005 ABC transporter 336 469 1.3E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 SUPERFAMILY SSF52540 307 526 8.9E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 PANTHER PTHR19211 5 565 1.3E-217 T 23-04-2016 SHYC_RS09870 13d06a6778fb54f86fc34e96a7301b2c 625 PANTHER PTHR19211:SF45 5 565 1.3E-217 T 23-04-2016 SHYC_RS05880 f64385600cabd153131b5aec4b0adb01 315 PANTHER PTHR41313 4 313 2.9E-115 T 23-04-2016 SHYC_RS05880 f64385600cabd153131b5aec4b0adb01 315 Gene3D G3DSA:3.40.50.150 101 285 6.2E-21 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05880 f64385600cabd153131b5aec4b0adb01 315 SUPERFAMILY SSF53335 18 303 4.73E-36 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05880 f64385600cabd153131b5aec4b0adb01 315 Pfam PF02384 N-6 DNA Methylase 105 286 1.2E-9 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SHYC_RS05880 f64385600cabd153131b5aec4b0adb01 315 PIRSF PIRSF026567 3 313 2.5E-103 T 23-04-2016 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted SHYC_RS10235 78dce79420d623a09f56fa3c1635abdd 573 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS10235 78dce79420d623a09f56fa3c1635abdd 573 Pfam PF00664 ABC transporter transmembrane region 23 283 1.1E-50 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS10235 78dce79420d623a09f56fa3c1635abdd 573 SUPERFAMILY SSF52540 325 569 1.42E-85 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10235 78dce79420d623a09f56fa3c1635abdd 573 Gene3D G3DSA:3.40.50.300 334 563 2.3E-77 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10235 78dce79420d623a09f56fa3c1635abdd 573 PANTHER PTHR24221 20 571 2.3E-211 T 23-04-2016 SHYC_RS10235 78dce79420d623a09f56fa3c1635abdd 573 SUPERFAMILY SSF90123 11 319 4.84E-72 T 23-04-2016 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 SHYC_RS10235 78dce79420d623a09f56fa3c1635abdd 573 Gene3D G3DSA:1.20.1560.10 20 319 5.7E-73 T 23-04-2016 SHYC_RS10235 78dce79420d623a09f56fa3c1635abdd 573 SMART SM00382 358 545 6.8E-12 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS10235 78dce79420d623a09f56fa3c1635abdd 573 Pfam PF00005 ABC transporter 349 499 1.1E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 PANTHER PTHR13847:SF5 1 357 5.3E-69 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 Gene3D G3DSA:3.30.1360.120 5 56 5.7E-55 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 Gene3D G3DSA:3.30.1360.120 147 235 5.7E-55 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 5 359 5.2E-133 T 23-04-2016 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 PANTHER PTHR13847 1 357 5.3E-69 T 23-04-2016 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 SUPERFAMILY SSF103025 4 280 1.07E-95 T 23-04-2016 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 Hamap MF_00259 Aminomethyltransferase [gcvT]. 4 363 46.16 T 23-04-2016 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 Gene3D G3DSA:3.30.70.1400 57 144 9.8E-33 T 23-04-2016 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 SUPERFAMILY SSF101790 273 358 1.34E-21 T 23-04-2016 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 PIRSF PIRSF006487 1 362 6.3E-101 T 23-04-2016 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 Gene3D G3DSA:2.40.30.110 281 357 8.4E-25 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 357 2.9E-24 T 23-04-2016 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 SHYC_RS06690 e914569198639b38fc257e1654ac94a8 363 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 257 6.9E-96 T 23-04-2016 IPR006222 Glycine cleavage T-protein-like, N-terminal SHYC_RS08580 60f91ca6a6a911491993b5b9ebb87f20 268 Gene3D G3DSA:1.10.3720.10 3 258 1.2E-40 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS08580 60f91ca6a6a911491993b5b9ebb87f20 268 PANTHER PTHR30193:SF10 4 263 8.9E-90 T 23-04-2016 SHYC_RS08580 60f91ca6a6a911491993b5b9ebb87f20 268 PANTHER PTHR30193 4 263 8.9E-90 T 23-04-2016 SHYC_RS08580 60f91ca6a6a911491993b5b9ebb87f20 268 SUPERFAMILY SSF161098 2 259 1.5E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS01880 d525d28e72b1ec17cc8b6de94945b201 181 PANTHER PTHR11241:SF1 1 173 2.5E-46 T 23-04-2016 SHYC_RS01880 d525d28e72b1ec17cc8b6de94945b201 181 PANTHER PTHR11241 1 173 2.5E-46 T 23-04-2016 SHYC_RS01880 d525d28e72b1ec17cc8b6de94945b201 181 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 170 1.5E-49 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SHYC_RS01880 d525d28e72b1ec17cc8b6de94945b201 181 SUPERFAMILY SSF51283 1 174 2.49E-45 T 23-04-2016 IPR029054 dUTPase-like SHYC_RS01880 d525d28e72b1ec17cc8b6de94945b201 181 Pfam PF00692 dUTPase 64 163 1.4E-16 T 23-04-2016 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase GO:0016787|GO:0046080 SHYC_RS01880 d525d28e72b1ec17cc8b6de94945b201 181 Gene3D G3DSA:2.70.40.10 1 173 6.0E-49 T 23-04-2016 IPR029054 dUTPase-like SHYC_RS01880 d525d28e72b1ec17cc8b6de94945b201 181 Hamap MF_00146 Deoxycytidine triphosphate deaminase [dcd]. 1 171 28.219 T 23-04-2016 IPR011962 Deoxycytidine triphosphate deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187|UniPathway: UPA00610 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 154 178 3.5E-18 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 3.5E-18 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 119 127 3.5E-18 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 287 305 3.5E-18 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 211 227 3.5E-18 T 23-04-2016 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PANTHER PTHR23023:SF55 1 306 3.2E-71 T 23-04-2016 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 4.1E-12 T 23-04-2016 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 4.1E-12 T 23-04-2016 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 4.1E-12 T 23-04-2016 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.1E-12 T 23-04-2016 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 291 1.0E-96 T 23-04-2016 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 Gene3D G3DSA:3.50.50.60 122 315 1.1E-23 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 Gene3D G3DSA:3.50.50.60 6 121 7.6E-15 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 PANTHER PTHR23023 1 306 3.2E-71 T 23-04-2016 SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 6 320 8.5E-137 T 23-04-2016 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA SHYC_RS06935 57f6eb2fa105d976f7bf46e8c9ded621 328 SUPERFAMILY SSF51905 7 301 2.46E-38 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS03570 31e4989bae342e8b9e61c10c5edf7be2 290 PIRSF PIRSF001359 1 285 1.1E-124 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHYC_RS03570 31e4989bae342e8b9e61c10c5edf7be2 290 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 3.8E-127 T 23-04-2016 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS03570 31e4989bae342e8b9e61c10c5edf7be2 290 PANTHER PTHR30304 1 285 2.8E-109 T 23-04-2016 SHYC_RS03570 31e4989bae342e8b9e61c10c5edf7be2 290 Gene3D G3DSA:3.20.20.70 1 289 1.1E-106 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS03570 31e4989bae342e8b9e61c10c5edf7be2 290 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 8.9E-111 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHYC_RS03570 31e4989bae342e8b9e61c10c5edf7be2 290 SUPERFAMILY SSF51569 1 285 6.15E-103 T 23-04-2016 SHYC_RS03570 31e4989bae342e8b9e61c10c5edf7be2 290 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHYC_RS03570 31e4989bae342e8b9e61c10c5edf7be2 290 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHYC_RS03570 31e4989bae342e8b9e61c10c5edf7be2 290 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 8.5E-101 T 23-04-2016 IPR000771 Ketose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 SHYC_RS07170 ec9c91c05bb9d03ca70dd942bc464b8e 73 PANTHER PTHR41284:SF1 3 73 4.6E-21 T 23-04-2016 SHYC_RS07170 ec9c91c05bb9d03ca70dd942bc464b8e 73 Pfam PF06855 YozE SAM-like fold 5 69 1.3E-22 T 23-04-2016 IPR023089 YozE SAM-like domain SHYC_RS07170 ec9c91c05bb9d03ca70dd942bc464b8e 73 PANTHER PTHR41284 3 73 4.6E-21 T 23-04-2016 SHYC_RS07170 ec9c91c05bb9d03ca70dd942bc464b8e 73 Gene3D G3DSA:1.10.150.260 2 71 7.8E-26 T 23-04-2016 IPR023089 YozE SAM-like domain SHYC_RS07170 ec9c91c05bb9d03ca70dd942bc464b8e 73 PIRSF PIRSF037262 2 72 2.5E-26 T 23-04-2016 IPR010673 Protein of unknown function UPF0346 SHYC_RS07170 ec9c91c05bb9d03ca70dd942bc464b8e 73 SUPERFAMILY SSF140652 4 70 3.14E-23 T 23-04-2016 IPR023089 YozE SAM-like domain SHYC_RS06180 8669b431ad1460806486c756b674be8e 87 PRINTS PR01853 Bacterial YajC preprotein translocase signature 4 24 8.3E-14 T 23-04-2016 IPR003849 Preprotein translocase YajC SHYC_RS06180 8669b431ad1460806486c756b674be8e 87 PRINTS PR01853 Bacterial YajC preprotein translocase signature 24 42 8.3E-14 T 23-04-2016 IPR003849 Preprotein translocase YajC SHYC_RS06180 8669b431ad1460806486c756b674be8e 87 Pfam PF02699 Preprotein translocase subunit 6 83 4.6E-30 T 23-04-2016 IPR003849 Preprotein translocase YajC SHYC_RS06180 8669b431ad1460806486c756b674be8e 87 PANTHER PTHR33909 1 86 2.5E-26 T 23-04-2016 SHYC_RS06180 8669b431ad1460806486c756b674be8e 87 PANTHER PTHR33909:SF1 1 86 2.5E-26 T 23-04-2016 SHYC_RS06180 8669b431ad1460806486c756b674be8e 87 SMART SM01323 2 85 1.2E-39 T 23-04-2016 IPR003849 Preprotein translocase YajC SHYC_RS06180 8669b431ad1460806486c756b674be8e 87 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 3 84 4.1E-28 T 23-04-2016 IPR003849 Preprotein translocase YajC SHYC_RS05800 108db60752fafb0a28a59cb32af0d1bf 205 Pfam PF01553 Acyltransferase 21 143 5.7E-20 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SHYC_RS05800 108db60752fafb0a28a59cb32af0d1bf 205 SMART SM00563 35 146 2.6E-24 T 23-04-2016 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 SHYC_RS05800 108db60752fafb0a28a59cb32af0d1bf 205 SUPERFAMILY SSF69593 18 197 3.27E-33 T 23-04-2016 SHYC_RS05800 108db60752fafb0a28a59cb32af0d1bf 205 Gene3D G3DSA:3.40.1130.10 16 202 9.0E-17 T 23-04-2016 SHYC_RS05800 108db60752fafb0a28a59cb32af0d1bf 205 PANTHER PTHR10434:SF21 1 199 1.2E-42 T 23-04-2016 SHYC_RS05800 108db60752fafb0a28a59cb32af0d1bf 205 PANTHER PTHR10434 1 199 1.2E-42 T 23-04-2016 SHYC_RS07955 24f03f8108749f08244007a5ce18f1be 261 SUPERFAMILY SSF53098 71 260 3.49E-64 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS07955 24f03f8108749f08244007a5ce18f1be 261 PANTHER PTHR10954 33 261 1.7E-81 T 23-04-2016 IPR001352 Ribonuclease HII/HIII GO:0003723|GO:0004523 SHYC_RS07955 24f03f8108749f08244007a5ce18f1be 261 Hamap MF_00052_B Ribonuclease HII [rnhB]. 77 256 35.426 T 23-04-2016 IPR022898 Ribonuclease HII GO:0004523 SHYC_RS07955 24f03f8108749f08244007a5ce18f1be 261 PANTHER PTHR10954:SF7 33 261 1.7E-81 T 23-04-2016 SHYC_RS07955 24f03f8108749f08244007a5ce18f1be 261 Gene3D G3DSA:3.30.420.10 77 217 6.8E-45 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS07955 24f03f8108749f08244007a5ce18f1be 261 Pfam PF01351 Ribonuclease HII 79 254 3.2E-39 T 23-04-2016 IPR024567 Ribonuclease HII/HIII domain SHYC_RS03460 687cb6374d6186ab1756a16c57ce091f 283 PANTHER PTHR10000:SF16 1 283 6.7E-68 T 23-04-2016 SHYC_RS03460 687cb6374d6186ab1756a16c57ce091f 283 Gene3D G3DSA:3.40.50.1000 186 283 1.5E-45 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03460 687cb6374d6186ab1756a16c57ce091f 283 Gene3D G3DSA:3.40.50.1000 1 74 1.5E-45 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03460 687cb6374d6186ab1756a16c57ce091f 283 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 278 4.1E-50 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03460 687cb6374d6186ab1756a16c57ce091f 283 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 250 3.1E-25 T 23-04-2016 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: REACT_17015 SHYC_RS03460 687cb6374d6186ab1756a16c57ce091f 283 PANTHER PTHR10000 1 283 6.7E-68 T 23-04-2016 SHYC_RS03460 687cb6374d6186ab1756a16c57ce091f 283 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 278 2.8E-46 T 23-04-2016 IPR000150 Cof protein GO:0016787 SHYC_RS03460 687cb6374d6186ab1756a16c57ce091f 283 SUPERFAMILY SSF56784 1 282 1.04E-54 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 Gene3D G3DSA:3.30.860.10 1 92 1.1E-42 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 SUPERFAMILY SSF54570 3 84 9.68E-36 T 23-04-2016 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 2.5E-48 T 23-04-2016 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 PIRSF PIRSF002144 1 92 3.6E-33 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 Pfam PF00203 Ribosomal protein S19 3 83 7.1E-38 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 2.2E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 2.2E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 2.2E-24 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 23-04-2016 IPR020934 Ribosomal protein S19 conserved site GO:0003723 SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 PANTHER PTHR11880 1 91 1.9E-56 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03080 75f07ab3b0e47a84f5de0c473287e4c5 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.68 T 23-04-2016 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 SUPERFAMILY SSF53850 92 287 3.98E-20 T 23-04-2016 SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 Gene3D G3DSA:3.40.190.10 176 256 3.2E-12 T 23-04-2016 SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 PANTHER PTHR30126 1 294 3.7E-56 T 23-04-2016 SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 Gene3D G3DSA:1.10.10.10 1 82 1.5E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 PANTHER PTHR30126:SF13 1 294 3.7E-56 T 23-04-2016 SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 Pfam PF03466 LysR substrate binding domain 92 284 5.8E-21 T 23-04-2016 IPR005119 LysR, substrate-binding SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 SUPERFAMILY SSF46785 1 84 8.18E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 61 1.1E-18 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS02690 c57141b6e6edeba81f46362f8bcbdc90 296 Gene3D G3DSA:3.40.190.10 94 175 6.7E-4 T 23-04-2016 SHYC_RS04380 eb7198132d7481bbb195323f5bed6682 508 Pfam PF00005 ABC transporter 37 139 1.6E-5 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS04380 eb7198132d7481bbb195323f5bed6682 508 PANTHER PTHR24220 20 235 2.7E-29 T 23-04-2016 SHYC_RS04380 eb7198132d7481bbb195323f5bed6682 508 PANTHER PTHR24220 251 278 2.7E-29 T 23-04-2016 SHYC_RS04380 eb7198132d7481bbb195323f5bed6682 508 Gene3D G3DSA:3.40.50.300 28 235 4.3E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04380 eb7198132d7481bbb195323f5bed6682 508 PANTHER PTHR24220:SF255 20 235 2.7E-29 T 23-04-2016 SHYC_RS04380 eb7198132d7481bbb195323f5bed6682 508 PANTHER PTHR24220:SF255 251 278 2.7E-29 T 23-04-2016 SHYC_RS04380 eb7198132d7481bbb195323f5bed6682 508 SUPERFAMILY SSF52540 30 229 9.03E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00485 f27da920b82fab7d8011b50c40744d25 125 Pfam PF04650 YSIRK type signal peptide 9 33 2.1E-11 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS00485 f27da920b82fab7d8011b50c40744d25 125 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 5 45 1.8E-14 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS00355 c5178042344b8c2749de33a5da5ffc02 586 Pfam PF06276 Ferric iron reductase FhuF-like transporter 414 558 4.7E-15 T 23-04-2016 IPR022770 Ferric iron reductase FhuF domain SHYC_RS00355 c5178042344b8c2749de33a5da5ffc02 586 PANTHER PTHR34384 12 583 2.3E-134 T 23-04-2016 SHYC_RS00355 c5178042344b8c2749de33a5da5ffc02 586 Pfam PF04183 IucA / IucC family 138 378 4.2E-53 T 23-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 SHYC_RS00355 c5178042344b8c2749de33a5da5ffc02 586 PANTHER PTHR34384:SF6 12 583 2.3E-134 T 23-04-2016 SHYC_RS11575 ef3f3f38b8842710c3a55ef218c27111 100 PANTHER PTHR33169 1 100 1.8E-17 T 23-04-2016 SHYC_RS11575 ef3f3f38b8842710c3a55ef218c27111 100 Pfam PF03551 Transcriptional regulator PadR-like family 18 87 3.2E-17 T 23-04-2016 IPR005149 Transcription regulator PadR, N-terminal SHYC_RS11575 ef3f3f38b8842710c3a55ef218c27111 100 PANTHER PTHR33169:SF11 1 100 1.8E-17 T 23-04-2016 SHYC_RS11575 ef3f3f38b8842710c3a55ef218c27111 100 SUPERFAMILY SSF46785 4 98 1.15E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS11575 ef3f3f38b8842710c3a55ef218c27111 100 Gene3D G3DSA:1.10.10.10 3 99 1.0E-25 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07850 a6f58dbcb134b63eb787b24c784ea3a7 155 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 155 22.347 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SHYC_RS07850 a6f58dbcb134b63eb787b24c784ea3a7 155 SUPERFAMILY SSF75420 2 83 4.18E-25 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SHYC_RS07850 a6f58dbcb134b63eb787b24c784ea3a7 155 Pfam PF02576 Putative ribosome maturation factor RimP 11 150 8.0E-44 T 23-04-2016 IPR003728 Ribosome maturation factor RimP GO:0042274 SHYC_RS07850 a6f58dbcb134b63eb787b24c784ea3a7 155 PANTHER PTHR33867 1 153 2.6E-52 T 23-04-2016 SHYC_RS07850 a6f58dbcb134b63eb787b24c784ea3a7 155 PANTHER PTHR33867:SF1 1 153 2.6E-52 T 23-04-2016 SHYC_RS07850 a6f58dbcb134b63eb787b24c784ea3a7 155 Gene3D G3DSA:3.30.300.70 1 80 2.5E-30 T 23-04-2016 IPR028989 Ribosome maturation factor RimP, N-terminal SHYC_RS07850 a6f58dbcb134b63eb787b24c784ea3a7 155 Gene3D G3DSA:2.30.30.180 87 153 2.6E-24 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SHYC_RS07850 a6f58dbcb134b63eb787b24c784ea3a7 155 SUPERFAMILY SSF74942 84 153 6.93E-18 T 23-04-2016 IPR028998 Ribosome maturation factor RimP, C-terminal SHYC_RS04820 360ea23a1316969913005fb8c89a0513 601 SUPERFAMILY SSF52540 40 131 2.77E-7 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04820 360ea23a1316969913005fb8c89a0513 601 Pfam PF03237 Terminase-like family 83 442 3.6E-9 T 23-04-2016 IPR004921 Terminase, large subunit SHYC_RS04820 360ea23a1316969913005fb8c89a0513 601 Gene3D G3DSA:3.40.50.300 61 231 1.8E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05485 d4165b06987a9d904d76eaf85317dcd2 163 Pfam PF03780 Asp23 family, cell envelope-related function 36 141 6.4E-34 T 23-04-2016 IPR005531 Alkaline shock protein Asp23 SHYC_RS05485 d4165b06987a9d904d76eaf85317dcd2 163 PANTHER PTHR34297:SF1 15 163 3.3E-56 T 23-04-2016 SHYC_RS05485 d4165b06987a9d904d76eaf85317dcd2 163 PANTHER PTHR34297 15 163 3.3E-56 T 23-04-2016 SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 SMART SM00924 40 145 1.1E-24 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 Pfam PF03448 MgtE intracellular N domain 40 143 3.0E-21 T 23-04-2016 IPR006668 Magnesium transporter, MgtE intracellular domain SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 Pfam PF01769 Divalent cation transporter 329 451 8.8E-28 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 SUPERFAMILY SSF158791 20 142 4.71E-26 T 23-04-2016 SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 SUPERFAMILY SSF54631 144 281 8.34E-34 T 23-04-2016 SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 Gene3D G3DSA:3.10.580.10 138 271 2.4E-27 T 23-04-2016 SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 PANTHER PTHR11911 117 430 1.2E-44 T 23-04-2016 SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 SMART SM00116 216 264 7.0E-5 T 23-04-2016 IPR000644 CBS domain SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 SMART SM00116 152 205 0.25 T 23-04-2016 IPR000644 CBS domain SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 Gene3D G3DSA:1.25.60.10 20 137 1.1E-28 T 23-04-2016 SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 PANTHER PTHR11911:SF23 117 430 1.2E-44 T 23-04-2016 SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 Pfam PF00571 CBS domain 209 263 5.6E-9 T 23-04-2016 IPR000644 CBS domain SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 Pfam PF00571 CBS domain 146 203 4.3E-9 T 23-04-2016 IPR000644 CBS domain SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 Gene3D G3DSA:1.10.357.20 286 458 1.5E-55 T 23-04-2016 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 TIGRFAM TIGR00400 mgtE: magnesium transporter 26 458 7.1E-120 T 23-04-2016 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 SHYC_RS09060 2f2c2d8515bd6cc38345f938aa762299 461 SUPERFAMILY SSF161093 285 457 9.81E-51 T 23-04-2016 SHYC_RS11175 aad06701f3297fffa691ba773322720c 381 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 377 7.9E-151 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS11175 aad06701f3297fffa691ba773322720c 381 Gene3D G3DSA:3.90.1150.10 245 379 1.9E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS11175 aad06701f3297fffa691ba773322720c 381 SUPERFAMILY SSF53383 6 378 2.5E-114 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS11175 aad06701f3297fffa691ba773322720c 381 Gene3D G3DSA:3.40.640.10 3 244 1.8E-98 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS11175 aad06701f3297fffa691ba773322720c 381 PANTHER PTHR11808 5 381 1.6E-190 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS11175 aad06701f3297fffa691ba773322720c 381 PIRSF PIRSF001434 1 380 1.2E-140 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS11175 aad06701f3297fffa691ba773322720c 381 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS08960 46e7731701170b1dbee2bff179ba0d6a 330 PANTHER PTHR12561:SF3 1 330 2.2E-122 T 23-04-2016 SHYC_RS08960 46e7731701170b1dbee2bff179ba0d6a 330 SUPERFAMILY SSF82649 244 329 3.09E-24 T 23-04-2016 SHYC_RS08960 46e7731701170b1dbee2bff179ba0d6a 330 Pfam PF03099 Biotin/lipoate A/B protein ligase family 49 154 9.7E-8 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SHYC_RS08960 46e7731701170b1dbee2bff179ba0d6a 330 SUPERFAMILY SSF55681 3 243 2.63E-77 T 23-04-2016 SHYC_RS08960 46e7731701170b1dbee2bff179ba0d6a 330 PANTHER PTHR12561 1 330 2.2E-122 T 23-04-2016 SHYC_RS08960 46e7731701170b1dbee2bff179ba0d6a 330 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 245 328 5.3E-26 T 23-04-2016 IPR019491 Lipoate protein ligase, C-terminal UniPathway: UPA00537|UniPathway: UPA00537 SHYC_RS08960 46e7731701170b1dbee2bff179ba0d6a 330 Gene3D G3DSA:3.90.1550.10 5 243 1.1E-81 T 23-04-2016 SHYC_RS08960 46e7731701170b1dbee2bff179ba0d6a 330 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 324 1.3E-110 T 23-04-2016 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 UniPathway: UPA00537|UniPathway: UPA00537 SHYC_RS08960 46e7731701170b1dbee2bff179ba0d6a 330 Gene3D G3DSA:3.30.390.50 244 330 1.1E-29 T 23-04-2016 SHYC_RS00140 201e68f8b070daa6082d6c68dca5b002 148 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 24.708 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS00140 201e68f8b070daa6082d6c68dca5b002 148 SUPERFAMILY SSF55653 57 147 4.97E-26 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal SHYC_RS00140 201e68f8b070daa6082d6c68dca5b002 148 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal SHYC_RS00140 201e68f8b070daa6082d6c68dca5b002 148 Gene3D G3DSA:3.40.5.10 1 51 5.7E-24 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal SHYC_RS00140 201e68f8b070daa6082d6c68dca5b002 148 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 1.7E-44 T 23-04-2016 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS00140 201e68f8b070daa6082d6c68dca5b002 148 SUPERFAMILY SSF55658 1 56 2.27E-17 T 23-04-2016 IPR009027 Ribosomal protein L9/RNase H1, N-terminal SHYC_RS00140 201e68f8b070daa6082d6c68dca5b002 148 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 1.1E-21 T 23-04-2016 IPR020070 Ribosomal protein L9, N-terminal SHYC_RS00140 201e68f8b070daa6082d6c68dca5b002 148 PANTHER PTHR21368 1 147 2.0E-46 T 23-04-2016 IPR000244 Ribosomal protein L9 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS00140 201e68f8b070daa6082d6c68dca5b002 148 Gene3D G3DSA:3.10.430.100 61 147 3.7E-30 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal SHYC_RS00140 201e68f8b070daa6082d6c68dca5b002 148 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 146 5.3E-28 T 23-04-2016 IPR020069 Ribosomal protein L9, C-terminal SHYC_RS06125 7a58990f8040958d38385f436c976af6 278 PIRSF PIRSF038471 1 278 3.1E-52 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SHYC_RS06125 7a58990f8040958d38385f436c976af6 278 PANTHER PTHR34138 1 272 1.3E-58 T 23-04-2016 SHYC_RS06125 7a58990f8040958d38385f436c976af6 278 PANTHER PTHR34138:SF1 1 272 1.3E-58 T 23-04-2016 SHYC_RS06125 7a58990f8040958d38385f436c976af6 278 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 9 275 3.6E-42 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SHYC_RS06125 7a58990f8040958d38385f436c976af6 278 Pfam PF04085 rod shape-determining protein MreC 112 263 3.2E-39 T 23-04-2016 IPR007221 Rod shape-determining protein MreC GO:0008360 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 29 253 3.6E-90 T 23-04-2016 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 Gene3D G3DSA:1.10.10.10 103 159 1.5E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 3 255 2.2E-137 T 23-04-2016 IPR014288 RNA polymerase sigma-B factor GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 SUPERFAMILY SSF88946 12 104 4.19E-26 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 PANTHER PTHR30385:SF4 12 253 5.8E-93 T 23-04-2016 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 Pfam PF04542 Sigma-70 region 2 35 104 5.1E-16 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 PRINTS PR00046 Major sigma-70 factor signature 239 250 1.1E-9 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 PRINTS PR00046 Major sigma-70 factor signature 207 219 1.1E-9 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 PRINTS PR00046 Major sigma-70 factor signature 59 72 1.1E-9 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 PRINTS PR00046 Major sigma-70 factor signature 224 239 1.1E-9 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 SUPERFAMILY SSF88659 178 253 7.48E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 Pfam PF04539 Sigma-70 region 3 117 188 2.1E-17 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 Gene3D G3DSA:1.10.601.10 3 102 1.8E-17 T 23-04-2016 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 Gene3D G3DSA:1.10.10.10 195 253 9.3E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 SUPERFAMILY SSF88659 108 183 2.4E-15 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 253 3.7E-37 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 Pfam PF04545 Sigma-70, region 4 207 252 9.8E-15 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 224 250 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 59 72 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS03850 3d3712470c14c6e7f279c2d04c107776 256 PANTHER PTHR30385 12 253 5.8E-93 T 23-04-2016 SHYC_RS05350 393f68dd4b6cf45c5472872281beda61 176 SMART SM00347 34 137 2.6E-21 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS05350 393f68dd4b6cf45c5472872281beda61 176 PANTHER PTHR33164:SF1 29 118 6.3E-17 T 23-04-2016 SHYC_RS05350 393f68dd4b6cf45c5472872281beda61 176 PANTHER PTHR33164 29 118 6.3E-17 T 23-04-2016 SHYC_RS05350 393f68dd4b6cf45c5472872281beda61 176 SUPERFAMILY SSF46785 19 122 6.34E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS05350 393f68dd4b6cf45c5472872281beda61 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 73 107 - T 23-04-2016 IPR023187 Transcriptional regulator MarR-type, conserved site SHYC_RS05350 393f68dd4b6cf45c5472872281beda61 176 Pfam PF01047 MarR family 41 98 2.9E-12 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS05350 393f68dd4b6cf45c5472872281beda61 176 Gene3D G3DSA:1.10.10.10 9 127 1.2E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS05505 c6fab69e0ed88eab11b15471a41460bb 76 PANTHER PTHR33383 4 75 5.5E-44 T 23-04-2016 SHYC_RS05505 c6fab69e0ed88eab11b15471a41460bb 76 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 75 3.2E-35 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SHYC_RS05505 c6fab69e0ed88eab11b15471a41460bb 76 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 25.945 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SHYC_RS05505 c6fab69e0ed88eab11b15471a41460bb 76 Pfam PF01809 Haemolytic domain 3 68 3.4E-32 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SHYC_RS05505 c6fab69e0ed88eab11b15471a41460bb 76 SMART SM01234 1 68 1.9E-48 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SHYC_RS05505 c6fab69e0ed88eab11b15471a41460bb 76 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 1.0E-21 T 23-04-2016 IPR002696 Putative membrane protein insertion efficiency factor SHYC_RS10670 8d6ecf5298b8c64cca954c17a058b575 121 SUPERFAMILY SSF48300 3 57 7.46E-17 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS10670 8d6ecf5298b8c64cca954c17a058b575 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 121 24.965 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS10670 8d6ecf5298b8c64cca954c17a058b575 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 7.0E-16 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SHYC_RS10670 8d6ecf5298b8c64cca954c17a058b575 121 Gene3D G3DSA:3.30.1390.10 51 121 2.6E-32 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHYC_RS10670 8d6ecf5298b8c64cca954c17a058b575 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 49 3.0E-21 T 23-04-2016 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS10670 8d6ecf5298b8c64cca954c17a058b575 121 SUPERFAMILY SSF54736 51 121 8.72E-25 T 23-04-2016 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like SHYC_RS10670 8d6ecf5298b8c64cca954c17a058b575 121 Gene3D G3DSA:1.20.5.710 4 50 9.9E-25 T 23-04-2016 SHYC_RS10670 8d6ecf5298b8c64cca954c17a058b575 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 8.5E-47 T 23-04-2016 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS10670 8d6ecf5298b8c64cca954c17a058b575 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 7.8E-30 T 23-04-2016 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 SHYC_RS09930 d2b68f341d9606006ccc068799ff82ce 195 SUPERFAMILY SSF103473 11 186 5.36E-5 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS06625 dd63ca1ff99940b58ba2341cb74c3e58 179 PIRSF PIRSF006806 1 179 6.9E-46 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SHYC_RS06625 dd63ca1ff99940b58ba2341cb74c3e58 179 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 3 176 3.2E-44 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SHYC_RS06625 dd63ca1ff99940b58ba2341cb74c3e58 179 Gene3D G3DSA:3.40.50.10420 3 176 7.5E-46 T 23-04-2016 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain SHYC_RS06625 dd63ca1ff99940b58ba2341cb74c3e58 179 PANTHER PTHR23407 1 175 1.6E-43 T 23-04-2016 SHYC_RS06625 dd63ca1ff99940b58ba2341cb74c3e58 179 SUPERFAMILY SSF100950 1 176 1.67E-44 T 23-04-2016 SHYC_RS06625 dd63ca1ff99940b58ba2341cb74c3e58 179 PANTHER PTHR23407:SF1 1 175 1.6E-43 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SHYC_RS06625 dd63ca1ff99940b58ba2341cb74c3e58 179 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 3 175 7.3E-39 T 23-04-2016 IPR002698 5-formyltetrahydrofolate cyclo-ligase SHYC_RS03435 a1a00e0eb50784b249d789da95e9ccbb 268 SUPERFAMILY SSF143597 44 241 1.12E-66 T 23-04-2016 SHYC_RS03435 a1a00e0eb50784b249d789da95e9ccbb 268 PIRSF PIRSF004793 6 265 4.4E-88 T 23-04-2016 IPR014046 Diadenylate cyclase-like SHYC_RS03435 a1a00e0eb50784b249d789da95e9ccbb 268 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 122 240 2.5E-43 T 23-04-2016 IPR003390 DNA integrity scanning protein, DisA, N-terminal SHYC_RS03435 a1a00e0eb50784b249d789da95e9ccbb 268 Gene3D G3DSA:3.40.1700.10 116 244 1.7E-52 T 23-04-2016 SHYC_RS03435 a1a00e0eb50784b249d789da95e9ccbb 268 PANTHER PTHR34185 1 258 1.1E-106 T 23-04-2016 SHYC_RS03435 a1a00e0eb50784b249d789da95e9ccbb 268 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 8 257 1.8E-86 T 23-04-2016 IPR014046 Diadenylate cyclase-like SHYC_RS03435 a1a00e0eb50784b249d789da95e9ccbb 268 PANTHER PTHR34185:SF1 1 258 1.1E-106 T 23-04-2016 SHYC_RS11450 2e6685d65e3e6d18736169c764defe70 320 SUPERFAMILY SSF53613 1 316 5.46E-77 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS11450 2e6685d65e3e6d18736169c764defe70 320 PANTHER PTHR10584 1 320 2.3E-97 T 23-04-2016 SHYC_RS11450 2e6685d65e3e6d18736169c764defe70 320 Gene3D G3DSA:3.40.1190.20 2 318 3.2E-83 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS11450 2e6685d65e3e6d18736169c764defe70 320 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 34 58 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SHYC_RS11450 2e6685d65e3e6d18736169c764defe70 320 PANTHER PTHR10584:SF161 1 320 2.3E-97 T 23-04-2016 SHYC_RS11450 2e6685d65e3e6d18736169c764defe70 320 Pfam PF00294 pfkB family carbohydrate kinase 2 310 7.3E-71 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB SHYC_RS03615 af099ae21a68e40bf11b6ad0e520f611 350 Gene3D G3DSA:3.90.870.10 21 211 6.7E-67 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHYC_RS03615 af099ae21a68e40bf11b6ad0e520f611 350 PANTHER PTHR17490 21 345 1.1E-97 T 23-04-2016 SHYC_RS03615 af099ae21a68e40bf11b6ad0e520f611 350 Pfam PF01300 Telomere recombination 28 204 6.4E-54 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 SHYC_RS03615 af099ae21a68e40bf11b6ad0e520f611 350 PIRSF PIRSF004930 2 347 4.3E-109 T 23-04-2016 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 SHYC_RS03615 af099ae21a68e40bf11b6ad0e520f611 350 SUPERFAMILY SSF55821 22 210 1.65E-59 T 23-04-2016 IPR017945 DHBP synthase RibB-like alpha/beta domain SHYC_RS03615 af099ae21a68e40bf11b6ad0e520f611 350 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 21 214 1.4E-55 T 23-04-2016 IPR006070 YrdC-like domain GO:0003725 SHYC_RS03615 af099ae21a68e40bf11b6ad0e520f611 350 PANTHER PTHR17490:SF3 21 345 1.1E-97 T 23-04-2016 SHYC_RS03615 af099ae21a68e40bf11b6ad0e520f611 350 Pfam PF03481 Putative GTP-binding controlling metal-binding 206 339 2.0E-17 T 23-04-2016 IPR005145 Putative GTP-binding controlling metal-binding domain SHYC_RS03125 9bb42eeec03ce945059a30ac8d582434 61 SUPERFAMILY SSF57716 4 61 3.78E-22 T 23-04-2016 SHYC_RS03125 9bb42eeec03ce945059a30ac8d582434 61 Gene3D G3DSA:4.10.830.10 2 61 1.0E-28 T 23-04-2016 SHYC_RS03125 9bb42eeec03ce945059a30ac8d582434 61 PANTHER PTHR19836 15 61 7.6E-36 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03125 9bb42eeec03ce945059a30ac8d582434 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 2.2E-24 T 23-04-2016 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03125 9bb42eeec03ce945059a30ac8d582434 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 23-04-2016 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 SHYC_RS03125 9bb42eeec03ce945059a30ac8d582434 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.786 T 23-04-2016 IPR023053 Ribosomal protein S14, type Z SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 SUPERFAMILY SSF52540 7 270 5.02E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 Pfam PF03144 Elongation factor Tu domain 2 308 373 2.4E-13 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 Gene3D G3DSA:3.40.50.300 6 276 6.8E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PANTHER PTHR23115:SF69 1 181 7.9E-233 T 23-04-2016 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PANTHER PTHR23115:SF69 244 466 7.9E-233 T 23-04-2016 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PANTHER PTHR23115:SF69 489 517 7.9E-233 T 23-04-2016 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 SUPERFAMILY SSF50447 255 381 1.46E-26 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 SUPERFAMILY SSF54980 388 459 6.12E-17 T 23-04-2016 IPR009022 Elongation factor G, III-V domain SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 55 70 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 150 3.3E-25 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 1 520 49.218 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PRINTS PR00315 GTP-binding elongation factor signature 134 143 1.9E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PRINTS PR00315 GTP-binding elongation factor signature 82 92 1.9E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PRINTS PR00315 GTP-binding elongation factor signature 98 109 1.9E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PRINTS PR00315 GTP-binding elongation factor signature 62 70 1.9E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.9E-11 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 Gene3D G3DSA:3.30.70.870 389 459 2.1E-15 T 23-04-2016 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 5 518 2.2E-193 T 23-04-2016 IPR004548 Peptide chain release factor 3 GO:0005525|GO:0005737|GO:0006415|GO:0016149 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 Pfam PF16658 Class II release factor RF3, C-terminal domain 382 507 1.4E-45 T 23-04-2016 IPR032090 Peptide chain release factor 3, C-terminal SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 Pfam PF00009 Elongation factor Tu GTP binding domain 12 270 8.7E-55 T 23-04-2016 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 Gene3D G3DSA:2.40.30.10 287 381 3.2E-24 T 23-04-2016 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PANTHER PTHR23115 1 181 7.9E-233 T 23-04-2016 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PANTHER PTHR23115 244 466 7.9E-233 T 23-04-2016 SHYC_RS09000 458a911759214da70695bdb2dcc1646f 520 PANTHER PTHR23115 489 517 7.9E-233 T 23-04-2016 SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 150 202 7.5E-6 T 23-04-2016 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 PRINTS PR01898 Bacterial superantigen superfamily signature 169 183 9.5E-15 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 PRINTS PR01898 Bacterial superantigen superfamily signature 212 228 9.5E-15 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 PRINTS PR01898 Bacterial superantigen superfamily signature 111 124 9.5E-15 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 PRINTS PR01898 Bacterial superantigen superfamily signature 156 169 9.5E-15 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 PRINTS PR01898 Bacterial superantigen superfamily signature 82 108 9.5E-15 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 SUPERFAMILY SSF50203 35 123 5.49E-24 T 23-04-2016 IPR008992 Enterotoxin GO:0009405 SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 Gene3D G3DSA:2.40.50.110 52 115 1.2E-21 T 23-04-2016 SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 44 122 1.7E-19 T 23-04-2016 IPR015282 Staphylococcal superantigen-like OB-fold domain SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 Gene3D G3DSA:3.10.20.120 116 230 1.0E-37 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 156 179 - T 23-04-2016 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 SUPERFAMILY SSF54334 144 229 1.57E-23 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 PRINTS PR01800 Staphylococcus aureus exotoxin signature 197 212 6.4E-22 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 6.4E-22 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 PRINTS PR01800 Staphylococcus aureus exotoxin signature 113 124 6.4E-22 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00505 6fcf5545953e83bf6bb66c81022fc8d1 230 PRINTS PR01800 Staphylococcus aureus exotoxin signature 155 171 6.4E-22 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00785 b3f6308f514d8ed68edb97409c489029 67 SUPERFAMILY SSF47413 3 64 1.02E-17 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS00785 b3f6308f514d8ed68edb97409c489029 67 Gene3D G3DSA:1.10.260.40 1 63 1.2E-22 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS00785 b3f6308f514d8ed68edb97409c489029 67 PANTHER PTHR10245:SF50 1 64 3.8E-38 T 23-04-2016 SHYC_RS00785 b3f6308f514d8ed68edb97409c489029 67 PANTHER PTHR10245 1 64 3.8E-38 T 23-04-2016 SHYC_RS00785 b3f6308f514d8ed68edb97409c489029 67 Pfam PF01381 Helix-turn-helix 5 56 8.2E-17 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS00785 b3f6308f514d8ed68edb97409c489029 67 SMART SM00530 4 59 7.6E-14 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS00530 93eab31735bcfcf920a83913168eaafb 192 PANTHER PTHR10245 1 94 1.9E-24 T 23-04-2016 SHYC_RS00530 93eab31735bcfcf920a83913168eaafb 192 SUPERFAMILY SSF47413 1 66 5.09E-18 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS00530 93eab31735bcfcf920a83913168eaafb 192 Gene3D G3DSA:1.10.260.40 1 65 9.5E-24 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS00530 93eab31735bcfcf920a83913168eaafb 192 Pfam PF01381 Helix-turn-helix 7 61 2.0E-13 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS00530 93eab31735bcfcf920a83913168eaafb 192 PANTHER PTHR10245:SF47 1 94 1.9E-24 T 23-04-2016 SHYC_RS00530 93eab31735bcfcf920a83913168eaafb 192 SMART SM00530 6 61 1.5E-11 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS07340 5fd688e25abaeb669c49984378318b52 345 Gene3D G3DSA:3.40.630.10 3 70 2.7E-58 T 23-04-2016 SHYC_RS07340 5fd688e25abaeb669c49984378318b52 345 Gene3D G3DSA:3.40.630.10 167 341 2.7E-58 T 23-04-2016 SHYC_RS07340 5fd688e25abaeb669c49984378318b52 345 Gene3D G3DSA:2.40.30.40 71 165 2.3E-31 T 23-04-2016 IPR023367 Peptidase M42, domain 2 SHYC_RS07340 5fd688e25abaeb669c49984378318b52 345 Pfam PF05343 M42 glutamyl aminopeptidase 46 334 5.3E-84 T 23-04-2016 IPR008007 Peptidase M42 SHYC_RS07340 5fd688e25abaeb669c49984378318b52 345 PANTHER PTHR32481 1 345 8.2E-183 T 23-04-2016 SHYC_RS07340 5fd688e25abaeb669c49984378318b52 345 SUPERFAMILY SSF53187 4 83 1.09E-49 T 23-04-2016 SHYC_RS07340 5fd688e25abaeb669c49984378318b52 345 SUPERFAMILY SSF53187 178 341 1.09E-49 T 23-04-2016 SHYC_RS07340 5fd688e25abaeb669c49984378318b52 345 SUPERFAMILY SSF101821 71 183 3.36E-29 T 23-04-2016 SHYC_RS07340 5fd688e25abaeb669c49984378318b52 345 PANTHER PTHR32481:SF7 1 345 8.2E-183 T 23-04-2016 SHYC_RS07340 5fd688e25abaeb669c49984378318b52 345 PIRSF PIRSF001123 2 343 1.0E-42 T 23-04-2016 IPR008007 Peptidase M42 SHYC_RS04655 6fc642b072b4699ca886209333a35f11 289 Pfam PF01545 Cation efflux family 15 205 7.5E-47 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHYC_RS04655 6fc642b072b4699ca886209333a35f11 289 Gene3D G3DSA:1.20.1510.10 12 206 3.3E-46 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain SHYC_RS04655 6fc642b072b4699ca886209333a35f11 289 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 287 5.0E-66 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHYC_RS04655 6fc642b072b4699ca886209333a35f11 289 SUPERFAMILY SSF161111 8 208 1.2E-53 T 23-04-2016 SHYC_RS04655 6fc642b072b4699ca886209333a35f11 289 PANTHER PTHR11562 9 286 1.1E-66 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHYC_RS04655 6fc642b072b4699ca886209333a35f11 289 Pfam PF16916 Dimerisation domain of Zinc Transporter 211 286 1.2E-18 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SHYC_RS04655 6fc642b072b4699ca886209333a35f11 289 SUPERFAMILY SSF160240 210 286 1.7E-17 T 23-04-2016 SHYC_RS04655 6fc642b072b4699ca886209333a35f11 289 Gene3D G3DSA:3.30.70.1350 208 286 4.2E-21 T 23-04-2016 IPR027470 Cation efflux protein, cytoplasmic domain SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 SUPERFAMILY SSF46997 42 91 8.79E-18 T 23-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 SUPERFAMILY SSF46997 97 150 2.72E-18 T 23-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Pfam PF04650 YSIRK type signal peptide 2 27 1.2E-10 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 SMART SM00257 322 366 2.7E-13 T 23-04-2016 IPR018392 LysM domain SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 SUPERFAMILY SSF54106 323 365 1.03E-10 T 23-04-2016 IPR018392 LysM domain SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 SUPERFAMILY SSF46997 212 268 1.96E-24 T 23-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Gene3D G3DSA:3.10.350.10 322 365 4.6E-16 T 23-04-2016 IPR018392 LysM domain SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 SUPERFAMILY SSF46997 155 210 3.14E-21 T 23-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Gene3D G3DSA:1.20.5.420 96 150 3.0E-27 T 23-04-2016 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Pfam PF01476 LysM domain 323 365 1.4E-11 T 23-04-2016 IPR018392 LysM domain SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 2 36 7.0E-10 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 PANTHER PTHR12239 97 300 3.7E-21 T 23-04-2016 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Pfam PF02216 B domain 96 145 5.4E-21 T 23-04-2016 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Pfam PF02216 B domain 155 206 4.6E-24 T 23-04-2016 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Pfam PF02216 B domain 212 264 2.0E-26 T 23-04-2016 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Pfam PF02216 B domain 41 86 3.7E-20 T 23-04-2016 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Gene3D G3DSA:1.20.5.420 214 269 8.6E-34 T 23-04-2016 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Gene3D G3DSA:1.20.5.420 156 210 8.0E-31 T 23-04-2016 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 Gene3D G3DSA:1.20.5.420 41 91 7.7E-27 T 23-04-2016 SHYC_RS00700 4ebc55f0f5b1ec0780680b22096a2f32 418 PANTHER PTHR12239:SF36 97 300 3.7E-21 T 23-04-2016 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 Pfam PF03979 Sigma-70 factor, region 1.1 25 81 1.9E-16 T 23-04-2016 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 14 369 34.194 T 23-04-2016 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 132 368 6.3E-124 T 23-04-2016 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 134 357 6.8E-39 T 23-04-2016 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 PANTHER PTHR30603 21 369 4.4E-213 T 23-04-2016 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 Pfam PF00140 Sigma-70 factor, region 1.2 98 130 1.8E-18 T 23-04-2016 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 SUPERFAMILY SSF88659 209 282 4.51E-22 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 Gene3D G3DSA:1.10.10.10 298 369 3.8E-34 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 Pfam PF04545 Sigma-70, region 4 304 357 3.5E-20 T 23-04-2016 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 Pfam PF04542 Sigma-70 region 2 136 205 4.3E-22 T 23-04-2016 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 329 355 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 PRINTS PR00046 Major sigma-70 factor signature 184 192 3.0E-32 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 PRINTS PR00046 Major sigma-70 factor signature 329 344 3.0E-32 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 PRINTS PR00046 Major sigma-70 factor signature 160 173 3.0E-32 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 PRINTS PR00046 Major sigma-70 factor signature 344 355 3.0E-32 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 PRINTS PR00046 Major sigma-70 factor signature 308 320 3.0E-32 T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 Gene3D G3DSA:1.10.601.10 21 205 8.2E-72 T 23-04-2016 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 Gene3D G3DSA:1.10.10.10 209 260 2.7E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 SUPERFAMILY SSF88659 266 367 4.49E-30 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 SUPERFAMILY SSF88946 97 206 1.96E-53 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 Pfam PF04539 Sigma-70 region 3 215 291 2.1E-31 T 23-04-2016 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 PANTHER PTHR30603:SF0 21 369 4.4E-213 T 23-04-2016 SHYC_RS06535 e3b6983f3578eccab170400f63a512c1 369 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 160 173 - T 23-04-2016 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS10115 7ea17ad037c3a0aeff6fd470bcac8bb4 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 248 6.1E-100 T 23-04-2016 SHYC_RS10115 7ea17ad037c3a0aeff6fd470bcac8bb4 255 Gene3D G3DSA:3.20.20.70 1 249 5.0E-52 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS10115 7ea17ad037c3a0aeff6fd470bcac8bb4 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 39.534 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SHYC_RS10115 7ea17ad037c3a0aeff6fd470bcac8bb4 255 PANTHER PTHR34266 1 255 8.3E-133 T 23-04-2016 SHYC_RS10115 7ea17ad037c3a0aeff6fd470bcac8bb4 255 SUPERFAMILY SSF110399 1 239 8.11E-76 T 23-04-2016 IPR008867 Thiazole biosynthesis GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892|UniPathway: UPA00060 SHYC_RS08380 56760b241aacc720a5c55ee9ec67af35 281 SUPERFAMILY SSF46548 140 264 1.74E-26 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHYC_RS08380 56760b241aacc720a5c55ee9ec67af35 281 Gene3D G3DSA:1.10.1060.10 139 265 1.1E-31 T 23-04-2016 SHYC_RS08380 56760b241aacc720a5c55ee9ec67af35 281 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 181 192 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHYC_RS08380 56760b241aacc720a5c55ee9ec67af35 281 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 37 260 1.2E-40 T 23-04-2016 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SHYC_RS08380 56760b241aacc720a5c55ee9ec67af35 281 Pfam PF13183 4Fe-4S dicluster domain 177 252 2.2E-9 T 23-04-2016 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain SHYC_RS08380 56760b241aacc720a5c55ee9ec67af35 281 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 35 143 2.0E-27 T 23-04-2016 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 SHYC_RS08380 56760b241aacc720a5c55ee9ec67af35 281 Gene3D G3DSA:3.10.20.30 25 138 2.6E-27 T 23-04-2016 IPR012675 Beta-grasp domain SHYC_RS08380 56760b241aacc720a5c55ee9ec67af35 281 PANTHER PTHR11921:SF15 13 271 2.6E-100 T 23-04-2016 SHYC_RS08380 56760b241aacc720a5c55ee9ec67af35 281 PANTHER PTHR11921 13 271 2.6E-100 T 23-04-2016 SHYC_RS08380 56760b241aacc720a5c55ee9ec67af35 281 SUPERFAMILY SSF54292 31 138 4.65E-23 T 23-04-2016 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 SHYC_RS02605 4d8968c2bbea7f5d4f422291d57b93f5 349 PANTHER PTHR10578 29 222 3.5E-108 T 23-04-2016 SHYC_RS02605 4d8968c2bbea7f5d4f422291d57b93f5 349 PANTHER PTHR10578 240 348 3.5E-108 T 23-04-2016 SHYC_RS02605 4d8968c2bbea7f5d4f422291d57b93f5 349 PANTHER PTHR10578:SF3 29 222 3.5E-108 T 23-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SHYC_RS02605 4d8968c2bbea7f5d4f422291d57b93f5 349 PANTHER PTHR10578:SF3 240 348 3.5E-108 T 23-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SHYC_RS02605 4d8968c2bbea7f5d4f422291d57b93f5 349 Gene3D G3DSA:3.20.20.70 30 334 9.3E-116 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS02605 4d8968c2bbea7f5d4f422291d57b93f5 349 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 10 337 34.801 T 23-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SHYC_RS02605 4d8968c2bbea7f5d4f422291d57b93f5 349 SUPERFAMILY SSF51395 30 348 4.4E-78 T 23-04-2016 SHYC_RS02605 4d8968c2bbea7f5d4f422291d57b93f5 349 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 13 335 2.8E-114 T 23-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SHYC_RS02605 4d8968c2bbea7f5d4f422291d57b93f5 349 PIRSF PIRSF003314 7 347 3.7E-118 T 23-04-2016 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 SHYC_RS02605 4d8968c2bbea7f5d4f422291d57b93f5 349 Pfam PF01070 FMN-dependent dehydrogenase 171 333 1.9E-18 T 23-04-2016 IPR000262 FMN-dependent dehydrogenase GO:0016491 SHYC_RS11900 0a10ba480d102d5b82e0bc7b959e1326 76 Pfam PF02796 Helix-turn-helix domain of resolvase 2 32 3.2E-6 T 23-04-2016 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 SHYC_RS10945 eeb76d236ae9c5d444cfc4b3a34b1fb5 395 SUPERFAMILY SSF53790 4 262 8.58E-26 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SHYC_RS10945 eeb76d236ae9c5d444cfc4b3a34b1fb5 395 Gene3D G3DSA:3.40.1010.10 5 101 3.4E-8 T 23-04-2016 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 SHYC_RS10945 eeb76d236ae9c5d444cfc4b3a34b1fb5 395 SUPERFAMILY SSF101386 244 333 6.73E-19 T 23-04-2016 SHYC_RS10945 eeb76d236ae9c5d444cfc4b3a34b1fb5 395 PANTHER PTHR30522 2 349 7.6E-102 T 23-04-2016 SHYC_RS10945 eeb76d236ae9c5d444cfc4b3a34b1fb5 395 PANTHER PTHR30522:SF0 2 349 7.6E-102 T 23-04-2016 IPR011551 NTP pyrophosphohydrolase MazG SHYC_RS10945 eeb76d236ae9c5d444cfc4b3a34b1fb5 395 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 254 327 3.5E-25 T 23-04-2016 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core SHYC_RS10945 eeb76d236ae9c5d444cfc4b3a34b1fb5 395 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 204 1.6E-12 T 23-04-2016 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 SHYC_RS10945 eeb76d236ae9c5d444cfc4b3a34b1fb5 395 Gene3D G3DSA:1.10.287.1080 245 299 9.2E-8 T 23-04-2016 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 Gene3D G3DSA:2.40.128.20 325 510 4.4E-78 T 23-04-2016 IPR012674 Calycin SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 Gene3D G3DSA:3.40.50.1980 198 314 2.9E-25 T 23-04-2016 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 Pfam PF01297 Zinc-uptake complex component A periplasmic 36 312 4.4E-65 T 23-04-2016 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PRINTS PR00690 Adhesin family signature 64 77 6.5E-10 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PRINTS PR00690 Adhesin family signature 253 271 6.5E-10 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PRINTS PR00690 Adhesin family signature 33 51 6.5E-10 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PRINTS PR00690 Adhesin family signature 77 94 6.5E-10 T 23-04-2016 IPR006128 Adhesion lipoprotein GO:0007155 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PANTHER PTHR30477:SF1 1 345 6.6E-80 T 23-04-2016 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 Gene3D G3DSA:3.40.50.1980 20 197 1.1E-50 T 23-04-2016 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PANTHER PTHR30477 1 345 6.6E-80 T 23-04-2016 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 331 510 1.2E-79 T 23-04-2016 IPR015304 ZinT domain GO:0008270 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 SUPERFAMILY SSF53807 32 314 7.36E-75 T 23-04-2016 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PRINTS PR00691 Adhesin B signature 249 266 2.5E-10 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PRINTS PR00691 Adhesin B signature 33 54 2.5E-10 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PRINTS PR00691 Adhesin B signature 77 96 2.5E-10 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PRINTS PR00691 Adhesin B signature 292 310 2.5E-10 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 PRINTS PR00691 Adhesin B signature 58 76 2.5E-10 T 23-04-2016 IPR006129 Adhesin B GO:0007155 SHYC_RS00630 b99c09ab3a7eb02c1157795134727121 510 SUPERFAMILY SSF50814 328 510 4.51E-74 T 23-04-2016 IPR011038 Calycin-like SHYC_RS05270 3078b2b706d7da561f0ce703c3069d04 190 SMART SM00717 60 105 1.6 T 23-04-2016 IPR001005 SANT/Myb domain SHYC_RS05270 3078b2b706d7da561f0ce703c3069d04 190 SMART SM00717 4 51 0.0096 T 23-04-2016 IPR001005 SANT/Myb domain SHYC_RS05270 3078b2b706d7da561f0ce703c3069d04 190 SUPERFAMILY SSF46689 4 98 8.28E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS05270 3078b2b706d7da561f0ce703c3069d04 190 Pfam PF13921 Myb-like DNA-binding domain 8 72 2.0E-9 T 23-04-2016 SHYC_RS05270 3078b2b706d7da561f0ce703c3069d04 190 Gene3D G3DSA:1.10.10.60 7 72 9.7E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS09495 ff242c0f1c10100ea1a0c004958f1ca8 106 SUPERFAMILY SSF52833 3 103 3.83E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09495 ff242c0f1c10100ea1a0c004958f1ca8 106 PANTHER PTHR10438:SF287 1 103 3.0E-51 T 23-04-2016 SHYC_RS09495 ff242c0f1c10100ea1a0c004958f1ca8 106 PANTHER PTHR10438 1 103 3.0E-51 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHYC_RS09495 ff242c0f1c10100ea1a0c004958f1ca8 106 Pfam PF00085 Thioredoxin 7 101 2.3E-17 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 SHYC_RS09495 ff242c0f1c10100ea1a0c004958f1ca8 106 Gene3D G3DSA:3.40.30.10 2 105 2.5E-20 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS02330 ec8d0b45ba60c4c643fcc5878f7b75e2 338 Pfam PF13303 Phosphotransferase system, EIIC 12 330 3.1E-103 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS02330 ec8d0b45ba60c4c643fcc5878f7b75e2 338 PANTHER PTHR41320 1 334 2.7E-68 T 23-04-2016 SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 Pfam PF00717 Peptidase S24-like 126 192 3.3E-17 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 Pfam PF01726 LexA DNA binding domain 1 65 1.0E-29 T 23-04-2016 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 SUPERFAMILY SSF51306 83 205 9.42E-36 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 133 144 1.7E-10 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 174 1.7E-10 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 132 1.7E-10 T 23-04-2016 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 1.6E-75 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 PANTHER PTHR33516 1 207 1.2E-101 T 23-04-2016 SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 Hamap MF_00015 LexA repressor [lexA]. 3 207 35.516 T 23-04-2016 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 Gene3D G3DSA:2.10.109.10 85 207 2.4E-43 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 PANTHER PTHR33516:SF2 1 207 1.2E-101 T 23-04-2016 SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 Gene3D G3DSA:1.10.10.10 1 69 5.8E-35 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07475 756cca3ad9acfc5089e37df311e2caaa 207 SUPERFAMILY SSF46785 3 70 2.8E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06580 62aeb13c5cfc290090d8a652fd5740a1 368 PANTHER PTHR30454 7 358 4.0E-201 T 23-04-2016 SHYC_RS06580 62aeb13c5cfc290090d8a652fd5740a1 368 Gene3D G3DSA:3.20.20.70 22 130 8.3E-9 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS06580 62aeb13c5cfc290090d8a652fd5740a1 368 SUPERFAMILY SSF56014 263 347 8.0E-14 T 23-04-2016 SHYC_RS06580 62aeb13c5cfc290090d8a652fd5740a1 368 PIRSF PIRSF004640 1 361 5.0E-152 T 23-04-2016 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SHYC_RS06580 62aeb13c5cfc290090d8a652fd5740a1 368 Pfam PF04551 GcpE protein 10 351 1.7E-138 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SHYC_RS06580 62aeb13c5cfc290090d8a652fd5740a1 368 Gene3D G3DSA:3.30.413.10 264 325 4.0E-4 T 23-04-2016 SHYC_RS06580 62aeb13c5cfc290090d8a652fd5740a1 368 SUPERFAMILY SSF51717 16 242 1.1E-17 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SHYC_RS06580 62aeb13c5cfc290090d8a652fd5740a1 368 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 350 2.0E-132 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SHYC_RS06580 62aeb13c5cfc290090d8a652fd5740a1 368 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 355 34.416 T 23-04-2016 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3|UniPathway: UPA00056 SHYC_RS03200 41438681f4f117a28c8a58b364fdece8 267 SMART SM00382 31 216 3.5E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS03200 41438681f4f117a28c8a58b364fdece8 267 Pfam PF00005 ABC transporter 22 168 2.9E-33 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS03200 41438681f4f117a28c8a58b364fdece8 267 SUPERFAMILY SSF52540 3 229 9.74E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03200 41438681f4f117a28c8a58b364fdece8 267 Gene3D G3DSA:3.40.50.300 3 231 3.8E-69 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03200 41438681f4f117a28c8a58b364fdece8 267 PANTHER PTHR24220 6 236 4.0E-92 T 23-04-2016 SHYC_RS03200 41438681f4f117a28c8a58b364fdece8 267 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS03200 41438681f4f117a28c8a58b364fdece8 267 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 5 258 8.0E-103 T 23-04-2016 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 SHYC_RS03200 41438681f4f117a28c8a58b364fdece8 267 PANTHER PTHR24220:SF435 6 236 4.0E-92 T 23-04-2016 SHYC_RS00915 57a51fd19d98be8880ac0b378fa8240e 208 Pfam PF02525 Flavodoxin-like fold 3 201 7.8E-44 T 23-04-2016 IPR003680 Flavodoxin-like fold SHYC_RS00915 57a51fd19d98be8880ac0b378fa8240e 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 208 28.129 T 23-04-2016 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 SHYC_RS00915 57a51fd19d98be8880ac0b378fa8240e 208 PANTHER PTHR10204 1 208 5.4E-78 T 23-04-2016 SHYC_RS00915 57a51fd19d98be8880ac0b378fa8240e 208 Gene3D G3DSA:3.40.50.360 1 205 7.6E-64 T 23-04-2016 IPR029039 Flavoprotein-like domain SHYC_RS00915 57a51fd19d98be8880ac0b378fa8240e 208 SUPERFAMILY SSF52218 1 207 1.84E-49 T 23-04-2016 IPR029039 Flavoprotein-like domain SHYC_RS00915 57a51fd19d98be8880ac0b378fa8240e 208 PANTHER PTHR10204:SF4 1 208 5.4E-78 T 23-04-2016 SHYC_RS06805 a57f02c3dcca8d16bebb1a89e4c59e31 327 SUPERFAMILY SSF52922 189 324 3.4E-38 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHYC_RS06805 a57f02c3dcca8d16bebb1a89e4c59e31 327 Gene3D G3DSA:3.40.50.970 2 196 3.1E-81 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS06805 a57f02c3dcca8d16bebb1a89e4c59e31 327 SMART SM00861 4 179 2.4E-61 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHYC_RS06805 a57f02c3dcca8d16bebb1a89e4c59e31 327 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 1.2E-45 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHYC_RS06805 a57f02c3dcca8d16bebb1a89e4c59e31 327 PANTHER PTHR11624 3 324 6.9E-153 T 23-04-2016 IPR033247 Transketolase family SHYC_RS06805 a57f02c3dcca8d16bebb1a89e4c59e31 327 Pfam PF02780 Transketolase, C-terminal domain 195 317 1.6E-39 T 23-04-2016 IPR033248 Transketolase, C-terminal domain SHYC_RS06805 a57f02c3dcca8d16bebb1a89e4c59e31 327 Gene3D G3DSA:3.40.50.920 198 323 1.8E-40 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHYC_RS06805 a57f02c3dcca8d16bebb1a89e4c59e31 327 PANTHER PTHR11624:SF21 3 324 6.9E-153 T 23-04-2016 SHYC_RS06805 a57f02c3dcca8d16bebb1a89e4c59e31 327 SUPERFAMILY SSF52518 3 193 3.24E-68 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS02255 a18d0a644c75acfba10aaac3c497c68d 357 Pfam PF13303 Phosphotransferase system, EIIC 16 348 1.3E-86 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS02255 a18d0a644c75acfba10aaac3c497c68d 357 PANTHER PTHR41320 2 351 1.3E-89 T 23-04-2016 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 PANTHER PTHR21110 5 391 5.8E-158 T 23-04-2016 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 Gene3D G3DSA:3.30.70.1250 100 216 1.2E-55 T 23-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 SUPERFAMILY SSF143856 100 216 4.32E-50 T 23-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 SUPERFAMILY SSF53649 4 100 4.45E-75 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 SUPERFAMILY SSF53649 217 390 4.45E-75 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 PANTHER PTHR21110:SF0 5 391 5.8E-158 T 23-04-2016 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 Gene3D G3DSA:3.40.720.10 220 390 5.6E-74 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 Gene3D G3DSA:3.40.720.10 2 99 5.6E-74 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 Hamap MF_00740 Phosphopentomutase [deoB]. 4 387 52.702 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 TIGRFAM TIGR01696 deoB: phosphopentomutase 6 385 2.6E-214 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 PIRSF PIRSF001491 3 391 1.8E-160 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SHYC_RS00730 1c3a75123b3d0e7f469b419e798000c0 391 Pfam PF01676 Metalloenzyme superfamily 6 378 3.8E-37 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SHYC_RS00860 614e5b44a92810642311a8c03f4827ce 497 PANTHER PTHR13847:SF214 3 403 4.2E-151 T 23-04-2016 SHYC_RS00860 614e5b44a92810642311a8c03f4827ce 497 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 4 493 50.317 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SHYC_RS00860 614e5b44a92810642311a8c03f4827ce 497 Gene3D G3DSA:3.50.50.60 9 46 9.5E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00860 614e5b44a92810642311a8c03f4827ce 497 Gene3D G3DSA:3.50.50.60 414 459 9.5E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00860 614e5b44a92810642311a8c03f4827ce 497 Gene3D G3DSA:3.50.50.60 184 265 9.5E-13 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00860 614e5b44a92810642311a8c03f4827ce 497 SUPERFAMILY SSF51905 7 275 4.66E-17 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00860 614e5b44a92810642311a8c03f4827ce 497 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 8 493 3.8E-212 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SHYC_RS00860 614e5b44a92810642311a8c03f4827ce 497 PANTHER PTHR13847 3 403 4.2E-151 T 23-04-2016 SHYC_RS00860 614e5b44a92810642311a8c03f4827ce 497 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 9 490 1.9E-184 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SHYC_RS05690 200d9bd18198919b26b4ca3ee38c982b 282 ProSitePatterns PS00770 Aminotransferases class-IV signature. 178 207 - T 23-04-2016 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: REACT_13 SHYC_RS05690 200d9bd18198919b26b4ca3ee38c982b 282 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 3 278 2.3E-128 T 23-04-2016 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 SHYC_RS05690 200d9bd18198919b26b4ca3ee38c982b 282 Gene3D G3DSA:3.30.470.10 3 104 1.1E-30 T 23-04-2016 SHYC_RS05690 200d9bd18198919b26b4ca3ee38c982b 282 PANTHER PTHR11825:SF38 4 279 5.1E-130 T 23-04-2016 SHYC_RS05690 200d9bd18198919b26b4ca3ee38c982b 282 PANTHER PTHR11825 4 279 5.1E-130 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SHYC_RS05690 200d9bd18198919b26b4ca3ee38c982b 282 SUPERFAMILY SSF56752 4 276 6.67E-73 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SHYC_RS05690 200d9bd18198919b26b4ca3ee38c982b 282 Gene3D G3DSA:3.20.10.10 125 278 2.2E-44 T 23-04-2016 SHYC_RS05690 200d9bd18198919b26b4ca3ee38c982b 282 Pfam PF01063 Amino-transferase class IV 30 251 7.3E-43 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 4 174 1.3E-34 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 Hamap MF_01416 ATP synthase subunit delta [atpD]. 1 177 16.947 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 PRINTS PR00125 ATP synthase delta subunit signature 4 23 1.8E-20 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 PRINTS PR00125 ATP synthase delta subunit signature 73 84 1.8E-20 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 PRINTS PR00125 ATP synthase delta subunit signature 84 98 1.8E-20 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 PRINTS PR00125 ATP synthase delta subunit signature 135 150 1.8E-20 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 PRINTS PR00125 ATP synthase delta subunit signature 150 168 1.8E-20 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 23-04-2016 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 Gene3D G3DSA:1.10.520.20 2 103 3.3E-17 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 Pfam PF00213 ATP synthase delta (OSCP) subunit 4 174 6.0E-42 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 SUPERFAMILY SSF47928 2 104 2.09E-18 T 23-04-2016 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain SHYC_RS03665 3d17b2b16d5d4889e5b5f7422aa1ba9a 179 PANTHER PTHR11910 8 179 1.6E-40 T 23-04-2016 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 SHYC_RS02540 dea172968e5de5c3ea8ddf09d65a9e60 510 PANTHER PTHR13847 1 412 3.8E-201 T 23-04-2016 SHYC_RS02540 dea172968e5de5c3ea8ddf09d65a9e60 510 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 18 497 2.0E-214 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SHYC_RS02540 dea172968e5de5c3ea8ddf09d65a9e60 510 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 17 502 7.6E-234 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SHYC_RS02540 dea172968e5de5c3ea8ddf09d65a9e60 510 SUPERFAMILY SSF51905 17 101 1.5E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02540 dea172968e5de5c3ea8ddf09d65a9e60 510 SUPERFAMILY SSF51905 171 273 1.5E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02540 dea172968e5de5c3ea8ddf09d65a9e60 510 SUPERFAMILY SSF51905 316 333 1.5E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02540 dea172968e5de5c3ea8ddf09d65a9e60 510 Gene3D G3DSA:3.50.50.60 159 343 2.9E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02540 dea172968e5de5c3ea8ddf09d65a9e60 510 Gene3D G3DSA:3.50.50.60 17 84 2.9E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS02540 dea172968e5de5c3ea8ddf09d65a9e60 510 PANTHER PTHR13847:SF214 1 412 3.8E-201 T 23-04-2016 SHYC_RS02540 dea172968e5de5c3ea8ddf09d65a9e60 510 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 14 502 52.727 T 23-04-2016 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254|UniPathway: UPA00223 SHYC_RS07605 b79cb92f5202c63eefe86c5070075a52 338 PANTHER PTHR30590 2 338 4.0E-67 T 23-04-2016 SHYC_RS07605 b79cb92f5202c63eefe86c5070075a52 338 Pfam PF04235 Protein of unknown function (DUF418) 162 332 6.7E-34 T 23-04-2016 IPR007349 Domain of unknown function DUF418 SHYC_RS07605 b79cb92f5202c63eefe86c5070075a52 338 PANTHER PTHR30590:SF3 2 338 4.0E-67 T 23-04-2016 SHYC_RS08740 4de086a58d5cfea6b7ada6e787d83c88 223 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 201 1.0E-44 T 23-04-2016 SHYC_RS08740 4de086a58d5cfea6b7ada6e787d83c88 223 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 216 41.236 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08740 4de086a58d5cfea6b7ada6e787d83c88 223 SMART SM01211 1 218 2.0E-113 T 23-04-2016 SHYC_RS08740 4de086a58d5cfea6b7ada6e787d83c88 223 PIRSF PIRSF001586 1 221 3.8E-78 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08740 4de086a58d5cfea6b7ada6e787d83c88 223 Gene3D G3DSA:3.40.50.880 1 218 5.0E-37 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS08740 4de086a58d5cfea6b7ada6e787d83c88 223 PANTHER PTHR10099 1 220 2.1E-116 T 23-04-2016 SHYC_RS08740 4de086a58d5cfea6b7ada6e787d83c88 223 SUPERFAMILY SSF52317 1 217 1.66E-72 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS08740 4de086a58d5cfea6b7ada6e787d83c88 223 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 217 1.3E-94 T 23-04-2016 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS02275 a9c8dcf00d2098c38bb39f9269e5f63c 573 PIRSF PIRSF002741 2 573 1.7E-102 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SHYC_RS02275 a9c8dcf00d2098c38bb39f9269e5f63c 573 PANTHER PTHR30290 4 570 9.1E-166 T 23-04-2016 SHYC_RS02275 a9c8dcf00d2098c38bb39f9269e5f63c 573 PANTHER PTHR30290:SF20 4 570 9.1E-166 T 23-04-2016 SHYC_RS02275 a9c8dcf00d2098c38bb39f9269e5f63c 573 Gene3D G3DSA:3.40.190.10 220 334 4.1E-33 T 23-04-2016 SHYC_RS02275 a9c8dcf00d2098c38bb39f9269e5f63c 573 Gene3D G3DSA:3.10.105.10 335 539 3.8E-56 T 23-04-2016 SHYC_RS02275 a9c8dcf00d2098c38bb39f9269e5f63c 573 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 482 2.0E-82 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain SHYC_RS02275 a9c8dcf00d2098c38bb39f9269e5f63c 573 Gene3D G3DSA:3.90.76.10 58 219 1.3E-29 T 23-04-2016 SHYC_RS02275 a9c8dcf00d2098c38bb39f9269e5f63c 573 SUPERFAMILY SSF53850 41 571 5.77E-117 T 23-04-2016 SHYC_RS03110 1042902269e8c74daf23f044cdddd63e 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 1.9E-57 T 23-04-2016 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 SHYC_RS03110 1042902269e8c74daf23f044cdddd63e 122 PANTHER PTHR11761 1 122 3.9E-73 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHYC_RS03110 1042902269e8c74daf23f044cdddd63e 122 Gene3D G3DSA:2.40.150.20 1 122 2.2E-52 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHYC_RS03110 1042902269e8c74daf23f044cdddd63e 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 23-04-2016 IPR019972 Ribosomal protein L14P, conserved site SHYC_RS03110 1042902269e8c74daf23f044cdddd63e 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.686 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHYC_RS03110 1042902269e8c74daf23f044cdddd63e 122 SMART SM01374 1 122 8.6E-84 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHYC_RS03110 1042902269e8c74daf23f044cdddd63e 122 SUPERFAMILY SSF50193 1 122 5.23E-50 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHYC_RS03110 1042902269e8c74daf23f044cdddd63e 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 4.8E-53 T 23-04-2016 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 SHYC_RS00815 4d1a9040e6125cff9324bc0e6d20b50e 255 SUPERFAMILY SSF53474 4 250 7.97E-40 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00815 4d1a9040e6125cff9324bc0e6d20b50e 255 PANTHER PTHR10061 10 244 1.3E-15 T 23-04-2016 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801 SHYC_RS00815 4d1a9040e6125cff9324bc0e6d20b50e 255 Pfam PF00756 Putative esterase 40 244 6.3E-15 T 23-04-2016 IPR000801 Putative esterase SHYC_RS00815 4d1a9040e6125cff9324bc0e6d20b50e 255 Gene3D G3DSA:3.40.50.1820 4 252 4.6E-46 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS02600 3473897f1201dcde3033f46d91baeb06 168 Pfam PF13279 Thioesterase-like superfamily 24 139 4.7E-21 T 23-04-2016 SHYC_RS02600 3473897f1201dcde3033f46d91baeb06 168 PANTHER PTHR31793 4 157 1.5E-43 T 23-04-2016 SHYC_RS02600 3473897f1201dcde3033f46d91baeb06 168 Gene3D G3DSA:3.10.129.10 14 148 6.7E-43 T 23-04-2016 IPR029069 HotDog domain SHYC_RS02600 3473897f1201dcde3033f46d91baeb06 168 SUPERFAMILY SSF54637 13 166 3.73E-40 T 23-04-2016 IPR029069 HotDog domain SHYC_RS02600 3473897f1201dcde3033f46d91baeb06 168 PANTHER PTHR31793:SF2 4 157 1.5E-43 T 23-04-2016 SHYC_RS09115 329d63918274ab976ad2ff1dbcbb0697 131 PANTHER PTHR30041:SF5 1 131 1.4E-83 T 23-04-2016 SHYC_RS09115 329d63918274ab976ad2ff1dbcbb0697 131 Gene3D G3DSA:3.40.30.10 1 128 1.1E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09115 329d63918274ab976ad2ff1dbcbb0697 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 36.786 T 23-04-2016 IPR023731 Regulatory protein Spx GO:0045892 SHYC_RS09115 329d63918274ab976ad2ff1dbcbb0697 131 SUPERFAMILY SSF52833 1 129 8.66E-39 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09115 329d63918274ab976ad2ff1dbcbb0697 131 PANTHER PTHR30041 1 131 1.4E-83 T 23-04-2016 SHYC_RS09115 329d63918274ab976ad2ff1dbcbb0697 131 Pfam PF03960 ArsC family 6 113 1.1E-22 T 23-04-2016 IPR006660 Arsenate reductase-like SHYC_RS09115 329d63918274ab976ad2ff1dbcbb0697 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 5.6E-36 T 23-04-2016 IPR006504 Transcriptional regulator Spx/MgsR SHYC_RS05910 1e5ed36d918b3ca1a00ea1a29bfd8971 137 Gene3D G3DSA:3.40.50.620 1 137 3.4E-23 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS05910 1e5ed36d918b3ca1a00ea1a29bfd8971 137 PANTHER PTHR31964 1 137 1.9E-14 T 23-04-2016 SHYC_RS05910 1e5ed36d918b3ca1a00ea1a29bfd8971 137 PRINTS PR01438 Universal stress protein signature 115 137 2.7E-8 T 23-04-2016 IPR006015 Universal stress protein A SHYC_RS05910 1e5ed36d918b3ca1a00ea1a29bfd8971 137 PRINTS PR01438 Universal stress protein signature 2 20 2.7E-8 T 23-04-2016 IPR006015 Universal stress protein A SHYC_RS05910 1e5ed36d918b3ca1a00ea1a29bfd8971 137 Pfam PF00582 Universal stress protein family 1 137 1.6E-20 T 23-04-2016 IPR006016 UspA GO:0006950 SHYC_RS05910 1e5ed36d918b3ca1a00ea1a29bfd8971 137 SUPERFAMILY SSF52402 4 137 5.36E-20 T 23-04-2016 SHYC_RS05910 1e5ed36d918b3ca1a00ea1a29bfd8971 137 PANTHER PTHR31964:SF42 1 137 1.9E-14 T 23-04-2016 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 SUPERFAMILY SSF52768 6 297 3.06E-88 T 23-04-2016 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 Gene3D G3DSA:3.40.800.10 5 297 2.2E-92 T 23-04-2016 IPR023696 Ureohydrolase domain SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 PANTHER PTHR11358 1 300 1.3E-117 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 Pfam PF00491 Arginase family 5 294 3.2E-76 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 PANTHER PTHR11358:SF2 1 300 1.3E-117 T 23-04-2016 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 PIRSF PIRSF036979 2 296 2.2E-31 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 PRINTS PR00116 Arginase signature 258 272 2.4E-46 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 PRINTS PR00116 Arginase signature 120 147 2.4E-46 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 PRINTS PR00116 Arginase signature 174 192 2.4E-46 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 PRINTS PR00116 Arginase signature 97 112 2.4E-46 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 PRINTS PR00116 Arginase signature 223 252 2.4E-46 T 23-04-2016 IPR006035 Ureohydrolase GO:0046872 Reactome: REACT_13 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 TIGRFAM TIGR01229 rocF_arginase: arginase 7 301 1.0E-95 T 23-04-2016 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: REACT_13|UniPathway: UPA00158 SHYC_RS03430 46adfa7a0655f51e1632a41edf07544b 301 ProSitePatterns PS01053 Arginase family signature. 226 247 - T 23-04-2016 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 Reactome: REACT_13 SHYC_RS09365 55f0b20246c660d43a45cfec3d7438c0 78 SUPERFAMILY SSF47336 2 77 3.8E-14 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS09365 55f0b20246c660d43a45cfec3d7438c0 78 Gene3D G3DSA:1.10.1200.10 1 77 1.1E-22 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS09365 55f0b20246c660d43a45cfec3d7438c0 78 PANTHER PTHR41270:SF1 2 78 1.6E-31 T 23-04-2016 SHYC_RS09365 55f0b20246c660d43a45cfec3d7438c0 78 Hamap MF_00565 D-alanine--poly(phosphoribitol) ligase subunit 2 [dltC]. 1 78 45.084 T 23-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SHYC_RS09365 55f0b20246c660d43a45cfec3d7438c0 78 PANTHER PTHR41270 2 78 1.6E-31 T 23-04-2016 SHYC_RS09365 55f0b20246c660d43a45cfec3d7438c0 78 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 4 76 2.3E-35 T 23-04-2016 IPR003230 D-alanine--poly(phosphoribitol) ligase subunit 2 GO:0019350|GO:0036370 KEGG: 00473+6.1.1.13|UniPathway: UPA00556 SHYC_RS09365 55f0b20246c660d43a45cfec3d7438c0 78 Pfam PF00550 Phosphopantetheine attachment site 5 73 7.2E-10 T 23-04-2016 IPR009081 Phosphopantetheine binding ACP domain SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 862 0.0 T 23-04-2016 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 Gene3D G3DSA:1.10.8.60 343 427 4.7E-36 T 23-04-2016 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 Gene3D G3DSA:1.10.1780.10 2 149 9.1E-28 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 PANTHER PTHR11638 1 863 0.0 T 23-04-2016 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 293 305 - T 23-04-2016 IPR018368 ClpA/B, conserved site 1 GO:0005524 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 SUPERFAMILY SSF52540 158 549 4.27E-95 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 202 334 8.5E-15 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 SMART SM01086 772 861 7.6E-32 T 23-04-2016 IPR019489 Clp ATPase, C-terminal SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 SUPERFAMILY SSF52540 550 859 5.66E-82 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 Gene3D G3DSA:3.40.50.300 554 782 1.3E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 23-04-2016 IPR028299 ClpA/B, conserved site 2 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 766 2.2E-56 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 Gene3D G3DSA:3.40.50.300 157 340 2.4E-52 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 SMART SM00382 601 740 2.4E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 SMART SM00382 197 343 1.0E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 66 2.7E-7 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 96 122 0.0012 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 SUPERFAMILY SSF81923 4 154 5.49E-30 T 23-04-2016 IPR004176 Clp, N-terminal GO:0019538 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 PANTHER PTHR11638:SF98 1 863 0.0 T 23-04-2016 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 772 850 4.4E-23 T 23-04-2016 IPR019489 Clp ATPase, C-terminal SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 7.6E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 7.6E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 7.6E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 7.6E-42 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS09170 2d77abff6c989219613c0749103dc002 869 Gene3D G3DSA:1.10.8.60 783 865 1.4E-28 T 23-04-2016 SHYC_RS01785 24dc084ecf576672dc10fc004fad7cf8 641 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 1 38 2.8E-12 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS01785 24dc084ecf576672dc10fc004fad7cf8 641 PANTHER PTHR34043 258 637 1.8E-94 T 23-04-2016 SHYC_RS01785 24dc084ecf576672dc10fc004fad7cf8 641 Gene3D G3DSA:3.40.50.1820 256 640 1.2E-127 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01785 24dc084ecf576672dc10fc004fad7cf8 641 PANTHER PTHR34043:SF1 258 637 1.8E-94 T 23-04-2016 SHYC_RS01785 24dc084ecf576672dc10fc004fad7cf8 641 SUPERFAMILY SSF53474 259 605 2.34E-44 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01785 24dc084ecf576672dc10fc004fad7cf8 641 Pfam PF04650 YSIRK type signal peptide 9 30 2.1E-5 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS06155 80772e03525ea7cca523b4b0a6d61650 147 SUPERFAMILY SSF55021 68 143 2.01E-8 T 23-04-2016 SHYC_RS06155 80772e03525ea7cca523b4b0a6d61650 147 PIRSF PIRSF025624 1 146 3.7E-51 T 23-04-2016 IPR008310 UPF0735 ACT domain-containing protein GO:0009094 SHYC_RS06155 80772e03525ea7cca523b4b0a6d61650 147 Gene3D G3DSA:3.30.70.260 69 140 5.3E-6 T 23-04-2016 SHYC_RS03705 06e087f42a97b1ab0474251d10f64a1b 146 SUPERFAMILY SSF54637 3 141 1.02E-46 T 23-04-2016 IPR029069 HotDog domain SHYC_RS03705 06e087f42a97b1ab0474251d10f64a1b 146 PANTHER PTHR30272 1 146 8.7E-85 T 23-04-2016 SHYC_RS03705 06e087f42a97b1ab0474251d10f64a1b 146 Pfam PF07977 FabA-like domain 14 136 3.3E-33 T 23-04-2016 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SHYC_RS03705 06e087f42a97b1ab0474251d10f64a1b 146 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 6 141 6.3E-53 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SHYC_RS03705 06e087f42a97b1ab0474251d10f64a1b 146 Gene3D G3DSA:3.10.129.10 2 143 2.4E-58 T 23-04-2016 IPR029069 HotDog domain SHYC_RS03705 06e087f42a97b1ab0474251d10f64a1b 146 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 5 144 32.078 T 23-04-2016 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321 SHYC_RS05315 ed898e5f4b6828e0d41da19ebf5dae5c 376 PIRSF PIRSF032178 1 376 1.3E-108 T 23-04-2016 IPR016991 Protein of unknown function UCP032178 SHYC_RS05315 ed898e5f4b6828e0d41da19ebf5dae5c 376 PANTHER PTHR35791:SF1 1 376 4.3E-50 T 23-04-2016 SHYC_RS05315 ed898e5f4b6828e0d41da19ebf5dae5c 376 PANTHER PTHR35791 1 376 4.3E-50 T 23-04-2016 SHYC_RS05315 ed898e5f4b6828e0d41da19ebf5dae5c 376 Pfam PF04286 Protein of unknown function (DUF445) 12 375 2.2E-67 T 23-04-2016 IPR007383 Protein of unknown function DUF445 SHYC_RS04245 1e5f468e538f56ec871154a87ac24b90 437 PANTHER PTHR11559:SF142 8 423 5.1E-77 T 23-04-2016 SHYC_RS04245 1e5f468e538f56ec871154a87ac24b90 437 Gene3D G3DSA:3.40.50.1820 5 423 2.3E-84 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS04245 1e5f468e538f56ec871154a87ac24b90 437 SUPERFAMILY SSF53474 6 423 6.16E-75 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS04245 1e5f468e538f56ec871154a87ac24b90 437 PANTHER PTHR11559 8 423 5.1E-77 T 23-04-2016 SHYC_RS04245 1e5f468e538f56ec871154a87ac24b90 437 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 176 191 - T 23-04-2016 IPR019826 Carboxylesterase type B, active site SHYC_RS04245 1e5f468e538f56ec871154a87ac24b90 437 Pfam PF00135 Carboxylesterase family 7 317 1.8E-66 T 23-04-2016 IPR002018 Carboxylesterase, type B SHYC_RS02950 a1167604131741c1de7566b08b8a8e7c 166 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 11 155 1.4E-34 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS02950 a1167604131741c1de7566b08b8a8e7c 166 SMART SM00852 14 160 4.6E-26 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS02950 a1167604131741c1de7566b08b8a8e7c 166 SUPERFAMILY SSF53218 10 165 1.31E-40 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS02950 a1167604131741c1de7566b08b8a8e7c 166 PIRSF PIRSF006443 1 166 2.4E-63 T 23-04-2016 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 UniPathway: UPA00344 SHYC_RS02950 a1167604131741c1de7566b08b8a8e7c 166 Gene3D G3DSA:3.40.980.10 3 165 7.4E-49 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS02950 a1167604131741c1de7566b08b8a8e7c 166 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 73 86 - T 23-04-2016 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 UniPathway: UPA00344 SHYC_RS02950 a1167604131741c1de7566b08b8a8e7c 166 PANTHER PTHR10192 4 164 5.2E-71 T 23-04-2016 SHYC_RS02950 a1167604131741c1de7566b08b8a8e7c 166 Pfam PF00994 Probable molybdopterin binding domain 14 159 3.6E-32 T 23-04-2016 IPR001453 MoaB/Mog domain SHYC_RS02950 a1167604131741c1de7566b08b8a8e7c 166 PANTHER PTHR10192:SF18 4 164 5.2E-71 T 23-04-2016 SHYC_RS07005 b34fda2a218910a4612df31b8a0bdf20 413 Gene3D G3DSA:1.25.40.10 27 182 3.3E-17 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS07005 b34fda2a218910a4612df31b8a0bdf20 413 Gene3D G3DSA:1.25.40.10 183 412 3.1E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS07005 b34fda2a218910a4612df31b8a0bdf20 413 Pfam PF13432 Tetratricopeptide repeat 134 193 0.0016 T 23-04-2016 SHYC_RS07005 b34fda2a218910a4612df31b8a0bdf20 413 SMART SM00028 268 301 65.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS07005 b34fda2a218910a4612df31b8a0bdf20 413 SMART SM00028 167 197 350.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS07005 b34fda2a218910a4612df31b8a0bdf20 413 SMART SM00028 96 129 41.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS07005 b34fda2a218910a4612df31b8a0bdf20 413 SMART SM00028 200 233 1.2 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS07005 b34fda2a218910a4612df31b8a0bdf20 413 SMART SM00028 234 267 43.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS07005 b34fda2a218910a4612df31b8a0bdf20 413 PANTHER PTHR23083 28 412 5.0E-32 T 23-04-2016 SHYC_RS07005 b34fda2a218910a4612df31b8a0bdf20 413 SUPERFAMILY SSF48452 26 319 6.75E-25 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS08635 540bf6f51773f456afab6565683873ef 71 Pfam PF07288 Protein of unknown function (DUF1447) 3 68 3.4E-27 T 23-04-2016 IPR009907 Protein of unknown function DUF1447 SHYC_RS08635 540bf6f51773f456afab6565683873ef 71 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 3 65 2.0E-23 T 23-04-2016 IPR009907 Protein of unknown function DUF1447 SHYC_RS08635 540bf6f51773f456afab6565683873ef 71 Hamap MF_01553 UPF0356 protein . 2 70 20.795 T 23-04-2016 IPR009907 Protein of unknown function DUF1447 SHYC_RS08635 540bf6f51773f456afab6565683873ef 71 PANTHER PTHR41306 3 71 2.1E-23 T 23-04-2016 IPR009907 Protein of unknown function DUF1447 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 SUPERFAMILY SSF53649 42 477 4.09E-123 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 ProSitePatterns PS00123 Alkaline phosphatase active site. 110 118 - T 23-04-2016 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 SMART SM00098 56 477 3.3E-132 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 PRINTS PR00113 Alkaline phosphatase signature 197 207 3.1E-41 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 PRINTS PR00113 Alkaline phosphatase signature 147 167 3.1E-41 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 PRINTS PR00113 Alkaline phosphatase signature 55 75 3.1E-41 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 PRINTS PR00113 Alkaline phosphatase signature 263 292 3.1E-41 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 PRINTS PR00113 Alkaline phosphatase signature 110 125 3.1E-41 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 PANTHER PTHR11596:SF5 429 477 3.6E-147 T 23-04-2016 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 PANTHER PTHR11596:SF5 51 411 3.6E-147 T 23-04-2016 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 PANTHER PTHR11596 429 477 3.6E-147 T 23-04-2016 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 PANTHER PTHR11596 51 411 3.6E-147 T 23-04-2016 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 Gene3D G3DSA:3.40.720.10 37 477 3.1E-127 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHYC_RS01560 23afebe75ec2d0e7af6d6cba245da50b 478 Pfam PF00245 Alkaline phosphatase 56 475 3.0E-113 T 23-04-2016 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00627+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 SHYC_RS08525 a6283f0c3b74443c3eb201596e90b13a 160 Gene3D G3DSA:2.60.40.420 76 152 2.9E-4 T 23-04-2016 IPR008972 Cupredoxin SHYC_RS08525 a6283f0c3b74443c3eb201596e90b13a 160 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 1 159 2.0E-71 T 23-04-2016 IPR020229 Uncharacterised protein YlaL SHYC_RS09485 fa56ccc66ea17c1b5344e1823ebfac11 126 Gene3D G3DSA:2.40.50.100 6 125 4.5E-55 T 23-04-2016 SHYC_RS09485 fa56ccc66ea17c1b5344e1823ebfac11 126 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SHYC_RS09485 fa56ccc66ea17c1b5344e1823ebfac11 126 SUPERFAMILY SSF51230 3 125 1.12E-47 T 23-04-2016 IPR011053 Single hybrid motif SHYC_RS09485 fa56ccc66ea17c1b5344e1823ebfac11 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 30.925 T 23-04-2016 IPR002930 Glycine cleavage system H-protein SHYC_RS09485 fa56ccc66ea17c1b5344e1823ebfac11 126 PANTHER PTHR11715 2 126 2.6E-71 T 23-04-2016 IPR002930 Glycine cleavage system H-protein SHYC_RS09485 fa56ccc66ea17c1b5344e1823ebfac11 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 124 7.6E-55 T 23-04-2016 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 SHYC_RS09485 fa56ccc66ea17c1b5344e1823ebfac11 126 Pfam PF01597 Glycine cleavage H-protein 7 124 4.0E-50 T 23-04-2016 IPR002930 Glycine cleavage system H-protein SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 Pfam PF02779 Transketolase, pyrimidine binding domain 354 523 3.1E-40 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 23-04-2016 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 PANTHER PTHR11624:SF1 340 662 0.0 T 23-04-2016 SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 PANTHER PTHR11624:SF1 4 313 0.0 T 23-04-2016 SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 661 3.0E-279 T 23-04-2016 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 SUPERFAMILY SSF52518 341 525 4.44E-62 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 Pfam PF02780 Transketolase, C-terminal domain 548 655 1.5E-7 T 23-04-2016 IPR033248 Transketolase, C-terminal domain SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 Gene3D G3DSA:3.40.50.970 5 325 2.1E-118 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 SUPERFAMILY SSF52518 8 324 1.04E-109 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 PANTHER PTHR11624 340 662 0.0 T 23-04-2016 IPR033247 Transketolase family SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 PANTHER PTHR11624 4 313 0.0 T 23-04-2016 IPR033247 Transketolase family SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 Gene3D G3DSA:3.40.50.920 538 661 7.8E-43 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 337 6.8E-143 T 23-04-2016 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560|UniPathway: UPA00064 SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 SUPERFAMILY SSF52922 534 661 5.85E-37 T 23-04-2016 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 SMART SM00861 353 524 2.2E-62 T 23-04-2016 IPR005475 Transketolase-like, pyrimidine-binding domain SHYC_RS07460 7e70dcd2ea5df3e0b943b1e5d07dec39 662 Gene3D G3DSA:3.40.50.970 332 535 6.0E-71 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS09825 a7cae33a4d7a560b0461ec32077dbdcf 289 PANTHER PTHR22911:SF6 1 289 1.9E-56 T 23-04-2016 SHYC_RS09825 a7cae33a4d7a560b0461ec32077dbdcf 289 PANTHER PTHR22911 1 289 1.9E-56 T 23-04-2016 SHYC_RS09825 a7cae33a4d7a560b0461ec32077dbdcf 289 SUPERFAMILY SSF103481 40 140 1.44E-11 T 23-04-2016 SHYC_RS09825 a7cae33a4d7a560b0461ec32077dbdcf 289 Pfam PF00892 EamA-like transporter family 147 275 6.3E-14 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHYC_RS09825 a7cae33a4d7a560b0461ec32077dbdcf 289 Pfam PF00892 EamA-like transporter family 5 137 2.0E-10 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHYC_RS09825 a7cae33a4d7a560b0461ec32077dbdcf 289 SUPERFAMILY SSF103481 180 276 4.45E-16 T 23-04-2016 SHYC_RS07560 6c248b49a93c87b3226276d091e78b16 169 ProSitePatterns PS01284 Thermonuclease family signature 2. 111 121 - T 23-04-2016 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 SHYC_RS07560 6c248b49a93c87b3226276d091e78b16 169 ProSitePatterns PS01123 Thermonuclease family signature 1. 49 73 - T 23-04-2016 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 SHYC_RS07560 6c248b49a93c87b3226276d091e78b16 169 Gene3D G3DSA:2.40.50.90 37 169 2.1E-39 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SHYC_RS07560 6c248b49a93c87b3226276d091e78b16 169 SUPERFAMILY SSF50199 38 169 3.53E-38 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SHYC_RS07560 6c248b49a93c87b3226276d091e78b16 169 SMART SM00318 38 169 2.2E-56 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SHYC_RS07560 6c248b49a93c87b3226276d091e78b16 169 Pfam PF00565 Staphylococcal nuclease homologue 63 169 4.2E-37 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SHYC_RS07560 6c248b49a93c87b3226276d091e78b16 169 PANTHER PTHR12302:SF0 4 169 1.5E-47 T 23-04-2016 SHYC_RS07560 6c248b49a93c87b3226276d091e78b16 169 PANTHER PTHR12302 4 169 1.5E-47 T 23-04-2016 SHYC_RS00560 0d0a5d9d124422dc25ccbc8777751c89 237 Pfam PF04507 Protein of unknown function, DUF576 3 235 1.9E-94 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS00560 0d0a5d9d124422dc25ccbc8777751c89 237 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 11 234 1.2E-85 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS08535 58bab65742a913230908f85604248208 379 PANTHER PTHR22893 1 354 6.8E-158 T 23-04-2016 SHYC_RS08535 58bab65742a913230908f85604248208 379 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 338 3.0E-63 T 23-04-2016 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 SHYC_RS08535 58bab65742a913230908f85604248208 379 SUPERFAMILY SSF51395 2 344 1.1E-74 T 23-04-2016 SHYC_RS08535 58bab65742a913230908f85604248208 379 Gene3D G3DSA:3.20.20.70 2 349 5.2E-78 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS08535 58bab65742a913230908f85604248208 379 PANTHER PTHR22893:SF48 1 354 6.8E-158 T 23-04-2016 SHYC_RS03660 e74d9e08ff974ff123afc8009423a42d 168 PANTHER PTHR33445 4 168 4.0E-45 T 23-04-2016 SHYC_RS03660 e74d9e08ff974ff123afc8009423a42d 168 Hamap MF_01398 ATP synthase subunit b [atpF]. 4 165 13.763 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHYC_RS03660 e74d9e08ff974ff123afc8009423a42d 168 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 20 165 1.1E-40 T 23-04-2016 IPR005864 ATPase, F0 complex, subunit B, bacterial GO:0015078|GO:0015986|GO:0045263 SHYC_RS03660 e74d9e08ff974ff123afc8009423a42d 168 SUPERFAMILY SSF81573 72 129 1.7E-6 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SHYC_RS03660 e74d9e08ff974ff123afc8009423a42d 168 Pfam PF00430 ATP synthase B/B' CF(0) 16 145 7.9E-34 T 23-04-2016 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 SHYC_RS03660 e74d9e08ff974ff123afc8009423a42d 168 Gene3D G3DSA:1.20.5.620 72 128 9.2E-4 T 23-04-2016 IPR028987 F-type ATP synthase subunit B-like, membrane domain SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 PANTHER PTHR23501:SF63 9 471 3.4E-146 T 23-04-2016 SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 SUPERFAMILY SSF103473 245 470 8.11E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 SUPERFAMILY SSF103473 6 192 8.11E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 Gene3D G3DSA:1.20.1250.20 10 189 1.2E-21 T 23-04-2016 SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 Gene3D G3DSA:1.20.1250.20 268 470 4.9E-18 T 23-04-2016 SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 9 433 3.9E-93 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 6.1E-12 T 23-04-2016 SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 299 323 6.1E-12 T 23-04-2016 SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 6.1E-12 T 23-04-2016 SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 6.1E-12 T 23-04-2016 SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 6.1E-12 T 23-04-2016 SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 PANTHER PTHR23501 9 471 3.4E-146 T 23-04-2016 SHYC_RS10185 660ad2f50a53519fe67d33bb7c8dd907 479 Pfam PF07690 Major Facilitator Superfamily 14 406 1.5E-41 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS09595 07e93aa2a4fdcf0ca52c702c3787e284 300 PANTHER PTHR11092:SF0 1 300 9.5E-117 T 23-04-2016 SHYC_RS09595 07e93aa2a4fdcf0ca52c702c3787e284 300 Pfam PF08338 Domain of unknown function (DUF1731) 251 297 3.1E-16 T 23-04-2016 IPR013549 Domain of unknown function DUF1731 SHYC_RS09595 07e93aa2a4fdcf0ca52c702c3787e284 300 PANTHER PTHR11092 1 300 9.5E-117 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 SHYC_RS09595 07e93aa2a4fdcf0ca52c702c3787e284 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 223 2.0E-17 T 23-04-2016 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain GO:0003824|GO:0050662 SHYC_RS09595 07e93aa2a4fdcf0ca52c702c3787e284 300 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 4 294 2.7E-100 T 23-04-2016 IPR010099 Epimerase family protein SDR39U1 SHYC_RS09595 07e93aa2a4fdcf0ca52c702c3787e284 300 Gene3D G3DSA:3.40.50.720 3 245 6.3E-23 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09595 07e93aa2a4fdcf0ca52c702c3787e284 300 SUPERFAMILY SSF51735 1 298 7.61E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06520 8618f5d4083add099f0c4b3aac8f5704 163 PANTHER PTHR11911 26 163 2.1E-58 T 23-04-2016 SHYC_RS06520 8618f5d4083add099f0c4b3aac8f5704 163 SUPERFAMILY SSF54631 24 159 4.93E-21 T 23-04-2016 SHYC_RS06520 8618f5d4083add099f0c4b3aac8f5704 163 PIRSF PIRSF026546 1 163 3.7E-72 T 23-04-2016 IPR016842 Protein of unknown function UCP026546, HtH-CBS SHYC_RS06520 8618f5d4083add099f0c4b3aac8f5704 163 SMART SM00116 106 158 46.0 T 23-04-2016 IPR000644 CBS domain SHYC_RS06520 8618f5d4083add099f0c4b3aac8f5704 163 SMART SM00116 39 87 0.11 T 23-04-2016 IPR000644 CBS domain SHYC_RS06520 8618f5d4083add099f0c4b3aac8f5704 163 Pfam PF00571 CBS domain 33 86 3.4E-6 T 23-04-2016 IPR000644 CBS domain SHYC_RS06520 8618f5d4083add099f0c4b3aac8f5704 163 Pfam PF00571 CBS domain 100 156 1.8E-4 T 23-04-2016 IPR000644 CBS domain SHYC_RS06520 8618f5d4083add099f0c4b3aac8f5704 163 Gene3D G3DSA:3.10.580.10 33 154 6.6E-19 T 23-04-2016 SHYC_RS06520 8618f5d4083add099f0c4b3aac8f5704 163 PANTHER PTHR11911:SF55 26 163 2.1E-58 T 23-04-2016 SHYC_RS01355 248eb0b3a807979a9e40efccb34d8b7a 441 SUPERFAMILY SSF53474 37 185 1.8E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01355 248eb0b3a807979a9e40efccb34d8b7a 441 SUPERFAMILY SSF53474 215 228 1.8E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01355 248eb0b3a807979a9e40efccb34d8b7a 441 Gene3D G3DSA:3.40.50.1820 33 248 1.9E-8 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS09795 5a0129fa02b585382c0163f8af32dd09 173 SUPERFAMILY SSF81301 14 168 5.23E-27 T 23-04-2016 SHYC_RS09795 5a0129fa02b585382c0163f8af32dd09 173 Gene3D G3DSA:3.30.460.10 6 168 2.1E-23 T 23-04-2016 SHYC_RS09795 5a0129fa02b585382c0163f8af32dd09 173 Pfam PF04229 GrpB protein 14 167 2.7E-19 T 23-04-2016 IPR007344 GrpB/Dephospho-CoA kinase SHYC_RS00935 eb6071b043c32a862afbd64959074098 140 PANTHER PTHR11527 8 140 5.1E-28 T 23-04-2016 IPR031107 Small heat shock protein HSP20 SHYC_RS00935 eb6071b043c32a862afbd64959074098 140 SUPERFAMILY SSF49764 16 139 2.84E-31 T 23-04-2016 IPR008978 HSP20-like chaperone SHYC_RS00935 eb6071b043c32a862afbd64959074098 140 PANTHER PTHR11527:SF119 8 140 5.1E-28 T 23-04-2016 SHYC_RS00935 eb6071b043c32a862afbd64959074098 140 Pfam PF00011 Hsp20/alpha crystallin family 37 140 1.7E-21 T 23-04-2016 IPR002068 Alpha crystallin/Hsp20 domain SHYC_RS00935 eb6071b043c32a862afbd64959074098 140 Gene3D G3DSA:2.60.40.790 21 140 6.2E-33 T 23-04-2016 IPR008978 HSP20-like chaperone SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 67 8.1E-12 T 23-04-2016 IPR027379 Cardiolipin synthase N-terminal SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 SUPERFAMILY SSF56024 281 483 4.71E-48 T 23-04-2016 SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 Gene3D G3DSA:3.30.870.10 332 473 4.9E-38 T 23-04-2016 SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 19 496 1.1E-186 T 23-04-2016 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 SUPERFAMILY SSF56024 88 325 1.18E-47 T 23-04-2016 SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 Pfam PF13091 PLD-like domain 337 463 1.1E-29 T 23-04-2016 IPR025202 Phospholipase D-like domain SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 Pfam PF13091 PLD-like domain 147 289 1.9E-13 T 23-04-2016 IPR025202 Phospholipase D-like domain SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 Hamap MF_01916 Cardiolipin synthase. 18 496 40.306 T 23-04-2016 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 Gene3D G3DSA:3.30.870.10 127 331 4.5E-44 T 23-04-2016 SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 PANTHER PTHR21248:SF10 23 496 5.5E-188 T 23-04-2016 SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 SMART SM00155 229 256 8.7E-5 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 SMART SM00155 409 436 6.2E-8 T 23-04-2016 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 SHYC_RS01510 1a5d8d53a1f9ec53750ef7146326cdf8 496 PANTHER PTHR21248 23 496 5.5E-188 T 23-04-2016 SHYC_RS04310 5445f9dc9bb361570f851555e721b7a5 189 SUPERFAMILY SSF53056 2 182 6.8E-40 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHYC_RS04310 5445f9dc9bb361570f851555e721b7a5 189 SMART SM00947 26 182 5.2E-30 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHYC_RS04310 5445f9dc9bb361570f851555e721b7a5 189 Gene3D G3DSA:3.40.1050.10 4 182 9.9E-37 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHYC_RS04310 5445f9dc9bb361570f851555e721b7a5 189 PANTHER PTHR11002 1 185 2.6E-62 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHYC_RS04310 5445f9dc9bb361570f851555e721b7a5 189 PANTHER PTHR11002:SF9 1 185 2.6E-62 T 23-04-2016 SHYC_RS04310 5445f9dc9bb361570f851555e721b7a5 189 Pfam PF00484 Carbonic anhydrase 33 178 4.7E-17 T 23-04-2016 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 Gene3D G3DSA:3.40.50.880 1 185 2.8E-42 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PANTHER PTHR11922:SF7 1 182 1.2E-51 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 Pfam PF00117 Glutamine amidotransferase class-I 3 180 8.0E-36 T 23-04-2016 IPR017926 Glutamine amidotransferase Reactome: REACT_1698 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 SUPERFAMILY SSF52317 1 186 5.64E-37 T 23-04-2016 IPR029062 Class I glutamine amidotransferase-like SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 40 54 4.9E-5 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 69 85 4.9E-5 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 69 80 2.2E-11 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 43 52 2.2E-11 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00096 Glutamine amidotransferase superfamily signature 159 172 2.2E-11 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 181 5.1E-41 T 23-04-2016 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661|UniPathway: UPA00035 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PANTHER PTHR11922 1 182 1.2E-51 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00097 Anthranilate synthase component II signature 2 16 5.0E-28 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00097 Anthranilate synthase component II signature 159 172 5.0E-28 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00097 Anthranilate synthase component II signature 69 80 5.0E-28 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00097 Anthranilate synthase component II signature 94 102 5.0E-28 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00097 Anthranilate synthase component II signature 43 52 5.0E-28 T 23-04-2016 SHYC_RS02140 a9f1be4d4d47599ec254d63eb38557a3 193 PRINTS PR00097 Anthranilate synthase component II signature 115 127 5.0E-28 T 23-04-2016 SHYC_RS09140 e76f7b9acf783c98de486a9ffe8a06c1 353 Gene3D G3DSA:1.10.3720.10 141 349 3.2E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09140 e76f7b9acf783c98de486a9ffe8a06c1 353 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 169 353 1.0E-30 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09140 e76f7b9acf783c98de486a9ffe8a06c1 353 SUPERFAMILY SSF161098 144 334 2.22E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09140 e76f7b9acf783c98de486a9ffe8a06c1 353 PANTHER PTHR30465:SF75 41 353 2.7E-182 T 23-04-2016 SHYC_RS09140 e76f7b9acf783c98de486a9ffe8a06c1 353 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 48 100 1.5E-17 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SHYC_RS09140 e76f7b9acf783c98de486a9ffe8a06c1 353 PANTHER PTHR30465 41 353 2.7E-182 T 23-04-2016 SHYC_RS02270 85216f9806c5dbb3088ad62e34204b6c 221 Gene3D G3DSA:3.40.50.720 3 210 5.6E-37 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02270 85216f9806c5dbb3088ad62e34204b6c 221 SUPERFAMILY SSF51735 3 209 7.09E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02270 85216f9806c5dbb3088ad62e34204b6c 221 PANTHER PTHR15020 3 221 2.3E-33 T 23-04-2016 SHYC_RS02270 85216f9806c5dbb3088ad62e34204b6c 221 Pfam PF13460 NAD(P)H-binding 8 195 7.0E-38 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01565 f5adffc9754436b5d0fe4eadd7186b88 147 Pfam PF13508 Acetyltransferase (GNAT) domain 48 136 2.2E-7 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS01565 f5adffc9754436b5d0fe4eadd7186b88 147 SUPERFAMILY SSF55729 11 138 2.66E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS01565 f5adffc9754436b5d0fe4eadd7186b88 147 Gene3D G3DSA:3.40.630.30 8 137 1.1E-16 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS06915 4babfd984276df420f774a596f0e39e2 82 SUPERFAMILY SSF54862 4 72 5.71E-14 T 23-04-2016 SHYC_RS06915 4babfd984276df420f774a596f0e39e2 82 PANTHER PTHR39163:SF1 1 82 3.3E-32 T 23-04-2016 SHYC_RS06915 4babfd984276df420f774a596f0e39e2 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 5.8E-8 T 23-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 SHYC_RS06915 4babfd984276df420f774a596f0e39e2 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 5.8E-8 T 23-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 SHYC_RS06915 4babfd984276df420f774a596f0e39e2 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 5.8E-8 T 23-04-2016 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 SHYC_RS06915 4babfd984276df420f774a596f0e39e2 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 69 1.8E-24 T 23-04-2016 SHYC_RS06915 4babfd984276df420f774a596f0e39e2 82 Gene3D G3DSA:3.30.70.20 4 81 1.1E-31 T 23-04-2016 SHYC_RS06915 4babfd984276df420f774a596f0e39e2 82 PANTHER PTHR39163 1 82 3.3E-32 T 23-04-2016 SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 Gene3D G3DSA:3.40.640.10 66 342 3.1E-90 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 PIRSF PIRSF000521 29 446 2.4E-35 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 446 49.254 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 443 2.9E-157 T 23-04-2016 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62|UniPathway: UPA00078 SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 PANTHER PTHR11986 1 446 6.0E-188 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 PANTHER PTHR11986:SF8 1 446 6.0E-188 T 23-04-2016 SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 Pfam PF00202 Aminotransferase class-III 28 443 1.0E-118 T 23-04-2016 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 SUPERFAMILY SSF53383 11 445 1.38E-124 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 Gene3D G3DSA:3.90.1150.10 345 446 1.7E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS01030 57139d79bb2da1d153fbb2b7798736e2 449 Gene3D G3DSA:3.90.1150.10 4 64 1.7E-45 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS05850 bfb147db59ad5071ca67aed996dd981b 378 PANTHER PTHR11601:SF50 1 377 3.0E-169 T 23-04-2016 SHYC_RS05850 bfb147db59ad5071ca67aed996dd981b 378 Gene3D G3DSA:3.90.1150.10 246 359 1.6E-32 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS05850 bfb147db59ad5071ca67aed996dd981b 378 SUPERFAMILY SSF53383 1 371 2.67E-88 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS05850 bfb147db59ad5071ca67aed996dd981b 378 Gene3D G3DSA:3.40.640.10 16 245 8.2E-65 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS05850 bfb147db59ad5071ca67aed996dd981b 378 Pfam PF00266 Aminotransferase class-V 3 360 6.5E-63 T 23-04-2016 IPR000192 Aminotransferase class V domain SHYC_RS05850 bfb147db59ad5071ca67aed996dd981b 378 PANTHER PTHR11601 1 377 3.0E-169 T 23-04-2016 SHYC_RS05850 bfb147db59ad5071ca67aed996dd981b 378 PIRSF PIRSF005572 1 376 9.2E-104 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SHYC_RS03140 3f20f62f21f2844e85a2a001ee86d619 119 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 119 29.052 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03140 3f20f62f21f2844e85a2a001ee86d619 119 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 119 4.1E-48 T 23-04-2016 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03140 3f20f62f21f2844e85a2a001ee86d619 119 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 119 2.2E-43 T 23-04-2016 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03140 3f20f62f21f2844e85a2a001ee86d619 119 PANTHER PTHR12899 4 119 1.4E-44 T 23-04-2016 SHYC_RS03140 3f20f62f21f2844e85a2a001ee86d619 119 SUPERFAMILY SSF53137 7 117 3.27E-51 T 23-04-2016 SHYC_RS03140 3f20f62f21f2844e85a2a001ee86d619 119 Gene3D G3DSA:3.30.420.100 24 119 4.3E-39 T 23-04-2016 SHYC_RS09330 91ffc7504b5e65024c48fb606a895308 400 PANTHER PTHR10632 1 345 1.8E-31 T 23-04-2016 SHYC_RS09330 91ffc7504b5e65024c48fb606a895308 400 SUPERFAMILY SSF51905 5 209 1.04E-27 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09330 91ffc7504b5e65024c48fb606a895308 400 SUPERFAMILY SSF51905 153 338 7.89E-21 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09330 91ffc7504b5e65024c48fb606a895308 400 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 324 2.6E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09330 91ffc7504b5e65024c48fb606a895308 400 PANTHER PTHR10632:SF8 1 345 1.8E-31 T 23-04-2016 SHYC_RS09330 91ffc7504b5e65024c48fb606a895308 400 Gene3D G3DSA:3.50.50.60 158 338 7.6E-22 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS09330 91ffc7504b5e65024c48fb606a895308 400 Gene3D G3DSA:3.50.50.60 4 136 8.0E-25 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01465 e81bb1bb8ab7fb7664a028a9fcc9b26c 235 Pfam PF05908 Poly-gamma-glutamate hydrolase 35 226 1.2E-54 T 23-04-2016 IPR008585 Poly-gamma-glutamate hydrolase SHYC_RS07595 79c69377098786ea18b2e8d72ba8c406 941 Pfam PF10425 C-terminus of bacterial fibrinogen-binding adhesin 295 443 2.9E-25 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS07595 79c69377098786ea18b2e8d72ba8c406 941 Gene3D G3DSA:2.60.40.1290 294 464 2.1E-32 T 23-04-2016 IPR011266 Fibrinogen-binding domain 2 GO:0005618|GO:0007155 SHYC_RS07595 79c69377098786ea18b2e8d72ba8c406 941 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 908 938 2.6E-5 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain SHYC_RS07595 79c69377098786ea18b2e8d72ba8c406 941 Gene3D G3DSA:2.60.40.1280 139 283 2.7E-36 T 23-04-2016 IPR011252 Fibrogen-binding domain 1 GO:0005618|GO:0007155 SHYC_RS07595 79c69377098786ea18b2e8d72ba8c406 941 TIGRFAM TIGR01168 YSIRK_signal: gram-positive signal peptide, YSIRK family 2 39 9.4E-8 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS07595 79c69377098786ea18b2e8d72ba8c406 941 Pfam PF04650 YSIRK type signal peptide 2 26 7.7E-9 T 23-04-2016 IPR005877 YSIRK Gram-positive signal peptide GO:0016020 SHYC_RS07595 79c69377098786ea18b2e8d72ba8c406 941 SUPERFAMILY SSF49401 139 283 2.73E-30 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS07595 79c69377098786ea18b2e8d72ba8c406 941 SUPERFAMILY SSF49401 294 463 2.36E-32 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS07120 7f998db4f235f39c0ee44e4823970607 234 PANTHER PTHR34300:SF2 11 228 4.3E-74 T 23-04-2016 SHYC_RS07120 7f998db4f235f39c0ee44e4823970607 234 Pfam PF02592 Putative vitamin uptake transporter 57 219 4.9E-46 T 23-04-2016 IPR003744 Protein of unknown function DUF165 SHYC_RS07120 7f998db4f235f39c0ee44e4823970607 234 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 29 224 4.6E-59 T 23-04-2016 IPR003744 Protein of unknown function DUF165 SHYC_RS07120 7f998db4f235f39c0ee44e4823970607 234 PANTHER PTHR34300 11 228 4.3E-74 T 23-04-2016 SHYC_RS04600 a8614e18487acacf3376cd6f00ddef83 156 PIRSF PIRSF029256 2 156 1.4E-66 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SHYC_RS04600 a8614e18487acacf3376cd6f00ddef83 156 SUPERFAMILY SSF75217 3 154 4.84E-41 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases SHYC_RS04600 a8614e18487acacf3376cd6f00ddef83 156 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 3 155 2.2E-65 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SHYC_RS04600 a8614e18487acacf3376cd6f00ddef83 156 Pfam PF00588 SpoU rRNA Methylase family 3 144 4.3E-31 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SHYC_RS04600 a8614e18487acacf3376cd6f00ddef83 156 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 153 34.247 T 23-04-2016 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 SHYC_RS04600 a8614e18487acacf3376cd6f00ddef83 156 PANTHER PTHR12029 3 156 1.4E-75 T 23-04-2016 SHYC_RS04600 a8614e18487acacf3376cd6f00ddef83 156 PANTHER PTHR12029:SF31 3 156 1.4E-75 T 23-04-2016 SHYC_RS04600 a8614e18487acacf3376cd6f00ddef83 156 Gene3D G3DSA:3.40.1280.10 2 155 2.5E-61 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHYC_RS05395 1237b1c592459d8246db52f2996b75d4 184 Gene3D G3DSA:3.40.50.1820 2 180 6.9E-55 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS05395 1237b1c592459d8246db52f2996b75d4 184 PANTHER PTHR15394 1 183 6.9E-49 T 23-04-2016 SHYC_RS05395 1237b1c592459d8246db52f2996b75d4 184 Pfam PF06821 Serine hydrolase 4 173 2.0E-27 T 23-04-2016 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 KEGG: 00231+3.-.-.-|KEGG: 00563+3.-.-.-|KEGG: 00983+3.-.-.- SHYC_RS05395 1237b1c592459d8246db52f2996b75d4 184 SUPERFAMILY SSF53474 4 181 2.52E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS05395 1237b1c592459d8246db52f2996b75d4 184 PANTHER PTHR15394:SF2 1 183 6.9E-49 T 23-04-2016 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 SUPERFAMILY SSF68923 11 210 2.27E-73 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 Gene3D G3DSA:3.40.449.10 25 210 2.2E-77 T 23-04-2016 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 249 264 - T 23-04-2016 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 Hamap MF_00453 Phosphoenolpyruvate carboxykinase [ATP] [pckA]. 10 526 54.993 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 478 2.9E-220 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 20 518 8.2E-235 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 PIRSF PIRSF006294 2 524 2.7E-238 T 23-04-2016 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117|UniPathway: UPA00138 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 PANTHER PTHR30031:SF0 18 525 5.4E-300 T 23-04-2016 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 Gene3D G3DSA:3.90.228.20 334 515 3.0E-119 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 Gene3D G3DSA:3.90.228.20 212 274 3.0E-119 T 23-04-2016 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: REACT_474|UniPathway: UPA00138 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 SUPERFAMILY SSF53795 212 514 3.89E-132 T 23-04-2016 SHYC_RS05520 755ea6836ad58c639e1c8669e7ee7b25 526 PANTHER PTHR30031 18 525 5.4E-300 T 23-04-2016 SHYC_RS10895 ce40cca6e1d5ed59167fbb3e15b386b2 123 TIGRFAM TIGR00526 folB_dom: FolB domain 3 119 4.8E-30 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SHYC_RS10895 ce40cca6e1d5ed59167fbb3e15b386b2 123 Pfam PF02152 Dihydroneopterin aldolase 5 116 3.0E-32 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SHYC_RS10895 ce40cca6e1d5ed59167fbb3e15b386b2 123 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 118 5.5E-37 T 23-04-2016 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SHYC_RS10895 ce40cca6e1d5ed59167fbb3e15b386b2 123 Gene3D G3DSA:3.30.1130.10 2 119 6.6E-42 T 23-04-2016 SHYC_RS10895 ce40cca6e1d5ed59167fbb3e15b386b2 123 SUPERFAMILY SSF55620 1 120 1.0E-39 T 23-04-2016 SHYC_RS10895 ce40cca6e1d5ed59167fbb3e15b386b2 123 SMART SM00905 5 118 1.6E-46 T 23-04-2016 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SHYC_RS10895 ce40cca6e1d5ed59167fbb3e15b386b2 123 PANTHER PTHR20941 3 118 2.0E-35 T 23-04-2016 SHYC_RS02965 ffdd8c27e944bce3e50a4d886b930538 159 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 2 140 1.3E-37 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SHYC_RS02965 ffdd8c27e944bce3e50a4d886b930538 159 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 2 124 8.8E-25 T 23-04-2016 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 SHYC_RS02965 ffdd8c27e944bce3e50a4d886b930538 159 PANTHER PTHR40072 1 144 5.6E-17 T 23-04-2016 SHYC_RS02965 ffdd8c27e944bce3e50a4d886b930538 159 Gene3D G3DSA:3.40.50.300 2 146 9.1E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02965 ffdd8c27e944bce3e50a4d886b930538 159 PANTHER PTHR40072:SF1 1 144 5.6E-17 T 23-04-2016 SHYC_RS02965 ffdd8c27e944bce3e50a4d886b930538 159 SUPERFAMILY SSF52540 2 135 1.16E-14 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04170 b592f99ac8e661d9213a062ee449b5a4 273 SUPERFAMILY SSF52402 4 269 6.7E-79 T 23-04-2016 SHYC_RS04170 b592f99ac8e661d9213a062ee449b5a4 273 Gene3D G3DSA:3.40.50.620 5 267 9.0E-69 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS04170 b592f99ac8e661d9213a062ee449b5a4 273 TIGRFAM TIGR00552 nadE: NAD+ synthetase 21 264 7.0E-72 T 23-04-2016 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SHYC_RS04170 b592f99ac8e661d9213a062ee449b5a4 273 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 268 30.108 T 23-04-2016 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5|UniPathway: UPA00253 SHYC_RS04170 b592f99ac8e661d9213a062ee449b5a4 273 Pfam PF02540 NAD synthase 24 265 1.6E-69 T 23-04-2016 IPR022310 NAD/GMP synthase SHYC_RS04170 b592f99ac8e661d9213a062ee449b5a4 273 PANTHER PTHR23090 1 269 4.9E-144 T 23-04-2016 SHYC_RS04170 b592f99ac8e661d9213a062ee449b5a4 273 PANTHER PTHR23090:SF7 1 269 4.9E-144 T 23-04-2016 SHYC_RS10245 4e15b55de7ab0355be2408d860bad375 132 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 67 5.2E-21 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHYC_RS10245 4e15b55de7ab0355be2408d860bad375 132 PANTHER PTHR10739 3 122 6.3E-41 T 23-04-2016 SHYC_RS10245 4e15b55de7ab0355be2408d860bad375 132 Pfam PF01467 Cytidylyltransferase-like 5 124 7.3E-23 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHYC_RS10245 4e15b55de7ab0355be2408d860bad375 132 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 126 3.9E-59 T 23-04-2016 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39 SHYC_RS10245 4e15b55de7ab0355be2408d860bad375 132 SUPERFAMILY SSF52374 2 125 2.51E-34 T 23-04-2016 SHYC_RS10245 4e15b55de7ab0355be2408d860bad375 132 Gene3D G3DSA:3.40.50.620 2 126 7.9E-37 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 Gene3D G3DSA:3.50.50.60 6 133 9.6E-118 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 Gene3D G3DSA:3.50.50.60 196 321 9.6E-118 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 Gene3D G3DSA:3.50.50.60 473 539 9.6E-118 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 88 111 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 SUPERFAMILY SSF54373 298 480 1.08E-55 T 23-04-2016 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 PANTHER PTHR11552:SF135 9 559 5.0E-239 T 23-04-2016 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 262 276 - T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 PANTHER PTHR11552 9 559 5.0E-239 T 23-04-2016 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 7 560 58.484 T 23-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 SUPERFAMILY SSF51905 479 541 7.03E-85 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 SUPERFAMILY SSF51905 5 296 7.03E-85 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 TIGRFAM TIGR01810 betA: choline dehydrogenase 10 543 3.9E-277 T 23-04-2016 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 Pfam PF05199 GMC oxidoreductase 395 533 3.7E-37 T 23-04-2016 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 Pfam PF00732 GMC oxidoreductase 9 303 9.3E-80 T 23-04-2016 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 SHYC_RS01600 6f6ee24a7a34ac23047712672534b615 564 PIRSF PIRSF000137 1 543 5.5E-140 T 23-04-2016 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494|UniPathway: UPA00529 SHYC_RS05390 3869986e4e92851b0545429518d626e7 467 Gene3D G3DSA:3.90.660.20 243 412 5.5E-37 T 23-04-2016 IPR027418 Protoporphyrinogen oxidase, C-terminal domain KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|UniPathway: UPA00251 SHYC_RS05390 3869986e4e92851b0545429518d626e7 467 Pfam PF01593 Flavin containing amine oxidoreductase 11 461 1.4E-49 T 23-04-2016 IPR002937 Amine oxidase GO:0016491|GO:0055114 SHYC_RS05390 3869986e4e92851b0545429518d626e7 467 PANTHER PTHR10742 1 467 1.7E-97 T 23-04-2016 SHYC_RS05390 3869986e4e92851b0545429518d626e7 467 PANTHER PTHR10742:SF277 1 467 1.7E-97 T 23-04-2016 SHYC_RS05390 3869986e4e92851b0545429518d626e7 467 SUPERFAMILY SSF51905 430 461 1.32E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05390 3869986e4e92851b0545429518d626e7 467 SUPERFAMILY SSF51905 3 320 1.32E-47 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS05390 3869986e4e92851b0545429518d626e7 467 Gene3D G3DSA:3.40.50.720 2 41 4.7E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05390 3869986e4e92851b0545429518d626e7 467 SUPERFAMILY SSF54373 305 412 5.1E-27 T 23-04-2016 SHYC_RS05390 3869986e4e92851b0545429518d626e7 467 Gene3D G3DSA:1.10.3110.10 107 201 3.5E-30 T 23-04-2016 SHYC_RS05390 3869986e4e92851b0545429518d626e7 467 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 1 461 3.1E-106 T 23-04-2016 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|UniPathway: UPA00251 SHYC_RS09085 d6e8a298e24ad37873d5a498b5e6a1e1 198 SMART SM01118 4 191 5.4E-21 T 23-04-2016 IPR023577 CYTH domain SHYC_RS09085 d6e8a298e24ad37873d5a498b5e6a1e1 198 Gene3D G3DSA:2.40.320.10 6 177 8.1E-18 T 23-04-2016 IPR023577 CYTH domain SHYC_RS09085 d6e8a298e24ad37873d5a498b5e6a1e1 198 PIRSF PIRSF012526 1 193 4.1E-61 T 23-04-2016 IPR009195 Uncharacterised protein family YjbK KEGG: 00230+3.6.1.-|KEGG: 00332+3.6.1.-|KEGG: 00790+3.6.1.- SHYC_RS09085 d6e8a298e24ad37873d5a498b5e6a1e1 198 Pfam PF01928 CYTH domain 5 186 7.5E-27 T 23-04-2016 IPR023577 CYTH domain SHYC_RS09085 d6e8a298e24ad37873d5a498b5e6a1e1 198 SUPERFAMILY SSF55154 5 186 1.14E-25 T 23-04-2016 IPR033469 CYTH-like domain SHYC_RS09085 d6e8a298e24ad37873d5a498b5e6a1e1 198 PANTHER PTHR41266 2 194 6.1E-51 T 23-04-2016 SHYC_RS02975 ebbcb345c7f1f07df152de33b58c4c0e 77 PANTHER PTHR33359 1 77 1.1E-21 T 23-04-2016 SHYC_RS02975 ebbcb345c7f1f07df152de33b58c4c0e 77 Pfam PF02597 ThiS family 3 77 5.6E-17 T 23-04-2016 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 SHYC_RS02975 ebbcb345c7f1f07df152de33b58c4c0e 77 Gene3D G3DSA:3.10.20.30 1 77 2.3E-20 T 23-04-2016 IPR012675 Beta-grasp domain SHYC_RS02975 ebbcb345c7f1f07df152de33b58c4c0e 77 SUPERFAMILY SSF54285 1 77 2.62E-17 T 23-04-2016 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp SHYC_RS02975 ebbcb345c7f1f07df152de33b58c4c0e 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 1 77 1.6E-21 T 23-04-2016 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 UniPathway: UPA00344 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 Gene3D G3DSA:3.90.980.10 112 239 1.6E-36 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 SMART SM00400 34 88 3.6E-36 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 Hamap MF_00974 DNA primase [dnaG]. 2 580 26.978 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 PIRSF PIRSF002811 1 590 5.0E-180 T 23-04-2016 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 PANTHER PTHR30313 1 583 7.7E-132 T 23-04-2016 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 SUPERFAMILY SSF56731 113 420 2.49E-85 T 23-04-2016 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 SMART SM00493 258 329 4.1E-10 T 23-04-2016 IPR006171 Toprim domain SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 TIGRFAM TIGR01391 dnaG: DNA primase 2 413 2.1E-140 T 23-04-2016 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 Gene3D G3DSA:3.90.580.10 2 96 2.5E-41 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 Pfam PF13662 Toprim domain 259 334 3.3E-14 T 23-04-2016 IPR006171 Toprim domain SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 SUPERFAMILY SSF57783 2 96 8.84E-37 T 23-04-2016 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 Gene3D G3DSA:3.40.1360.10 240 361 1.7E-39 T 23-04-2016 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 Pfam PF01807 CHC2 zinc finger 4 98 2.4E-39 T 23-04-2016 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 SUPERFAMILY SSF48024 456 545 2.75E-5 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SHYC_RS06530 4f85bc883422a2f199ea8a50379e89e4 594 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 250 2.8E-36 T 23-04-2016 IPR013264 DNA primase, catalytic core, N-terminal SHYC_RS05735 65ae765362f10b6ce8416eeae1b9f4fe 1077 Pfam PF09397 Ftsk gamma domain 1010 1069 1.1E-26 T 23-04-2016 IPR018541 FtsK gamma domain SHYC_RS05735 65ae765362f10b6ce8416eeae1b9f4fe 1077 PANTHER PTHR22683:SF42 513 1074 3.0E-258 T 23-04-2016 SHYC_RS05735 65ae765362f10b6ce8416eeae1b9f4fe 1077 SUPERFAMILY SSF46785 1008 1073 2.99E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS05735 65ae765362f10b6ce8416eeae1b9f4fe 1077 SMART SM00843 1007 1072 5.5E-33 T 23-04-2016 IPR018541 FtsK gamma domain SHYC_RS05735 65ae765362f10b6ce8416eeae1b9f4fe 1077 SUPERFAMILY SSF52540 698 985 7.83E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05735 65ae765362f10b6ce8416eeae1b9f4fe 1077 Pfam PF01580 FtsK/SpoIIIE family 725 863 9.6E-44 T 23-04-2016 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 SHYC_RS05735 65ae765362f10b6ce8416eeae1b9f4fe 1077 Gene3D G3DSA:3.40.50.300 698 979 9.8E-84 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05735 65ae765362f10b6ce8416eeae1b9f4fe 1077 PANTHER PTHR22683 513 1074 3.0E-258 T 23-04-2016 SHYC_RS10405 ebcf6dc6364f910e96072f7001f504ab 433 PANTHER PTHR11373 6 324 2.8E-99 T 23-04-2016 SHYC_RS10405 ebcf6dc6364f910e96072f7001f504ab 433 SMART SM00471 60 190 1.7E-10 T 23-04-2016 IPR003607 HD/PDEase domain SHYC_RS10405 ebcf6dc6364f910e96072f7001f504ab 433 SUPERFAMILY SSF109604 8 414 4.71E-110 T 23-04-2016 SHYC_RS10405 ebcf6dc6364f910e96072f7001f504ab 433 Pfam PF01966 HD domain 64 184 1.5E-15 T 23-04-2016 IPR006674 HD domain SHYC_RS10405 ebcf6dc6364f910e96072f7001f504ab 433 Gene3D G3DSA:1.10.3210.10 12 261 2.7E-84 T 23-04-2016 IPR006674 HD domain SHYC_RS08310 6c19ec77c0f18c27563d48ad08a8ec0a 143 PANTHER PTHR34701 2 143 2.0E-59 T 23-04-2016 SHYC_RS08310 6c19ec77c0f18c27563d48ad08a8ec0a 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 121 1.0E-60 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SHYC_RS08310 6c19ec77c0f18c27563d48ad08a8ec0a 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 58.122 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SHYC_RS08310 6c19ec77c0f18c27563d48ad08a8ec0a 143 Gene3D G3DSA:2.10.260.10 76 101 6.6E-4 T 23-04-2016 SHYC_RS08310 6c19ec77c0f18c27563d48ad08a8ec0a 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 142 1.0E-54 T 23-04-2016 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 SHYC_RS08310 6c19ec77c0f18c27563d48ad08a8ec0a 143 SUPERFAMILY SSF89447 1 136 1.05E-52 T 23-04-2016 SHYC_RS08310 6c19ec77c0f18c27563d48ad08a8ec0a 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 1.0E-19 T 23-04-2016 IPR020603 MraZ domain SHYC_RS08310 6c19ec77c0f18c27563d48ad08a8ec0a 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 141 7.5E-28 T 23-04-2016 IPR020603 MraZ domain SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 Pfam PF01713 Smr domain 707 782 4.4E-20 T 23-04-2016 IPR002625 Smr domain SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 SUPERFAMILY SSF160443 705 781 4.84E-10 T 23-04-2016 IPR002625 Smr domain SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 Pfam PF00488 MutS domain V 332 512 2.1E-36 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 PANTHER PTHR11361:SF14 14 602 1.8E-235 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 SUPERFAMILY SSF52540 293 518 3.81E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 781 21.108 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 SMART SM00533 12 316 4.1E-12 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 411 427 - T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 PIRSF PIRSF005814 1 782 5.8E-267 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 SMART SM00463 704 782 1.7E-22 T 23-04-2016 IPR002625 Smr domain SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 PANTHER PTHR11361 14 602 1.8E-235 T 23-04-2016 SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 SUPERFAMILY SSF48334 18 287 5.36E-23 T 23-04-2016 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 SMART SM00534 329 514 1.9E-84 T 23-04-2016 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 782 1.3E-238 T 23-04-2016 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 SHYC_RS08405 0fc55de61e8d10ca1a93e2871a6a329f 782 Gene3D G3DSA:3.40.50.300 293 518 1.7E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05385 c9be0a6eeae7271c7ee10144aee37dcf 307 TIGRFAM TIGR00109 hemH: ferrochelatase 3 304 1.4E-79 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SHYC_RS05385 c9be0a6eeae7271c7ee10144aee37dcf 307 Pfam PF00762 Ferrochelatase 5 304 6.9E-78 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SHYC_RS05385 c9be0a6eeae7271c7ee10144aee37dcf 307 SUPERFAMILY SSF53800 2 304 1.03E-80 T 23-04-2016 SHYC_RS05385 c9be0a6eeae7271c7ee10144aee37dcf 307 Hamap MF_00323 Ferrochelatase [hemH]. 3 307 30.046 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SHYC_RS05385 c9be0a6eeae7271c7ee10144aee37dcf 307 Gene3D G3DSA:3.40.50.1400 155 286 7.5E-40 T 23-04-2016 SHYC_RS05385 c9be0a6eeae7271c7ee10144aee37dcf 307 PANTHER PTHR11108 1 301 1.2E-93 T 23-04-2016 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SHYC_RS05385 c9be0a6eeae7271c7ee10144aee37dcf 307 ProSitePatterns PS00534 Ferrochelatase signature. 176 195 - T 23-04-2016 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|UniPathway: UPA00252 SHYC_RS05385 c9be0a6eeae7271c7ee10144aee37dcf 307 Gene3D G3DSA:3.40.50.1400 2 154 6.1E-37 T 23-04-2016 SHYC_RS08455 27bbed34b16bf7ac567dcc69885362ba 379 Hamap MF_01539 UPF0348 protein . 2 375 32.624 T 23-04-2016 IPR008513 Uncharacterised protein family UPF0348 SHYC_RS08455 27bbed34b16bf7ac567dcc69885362ba 379 Pfam PF05636 HIGH Nucleotidyl Transferase 1 368 1.1E-111 T 23-04-2016 IPR008513 Uncharacterised protein family UPF0348 SHYC_RS08455 27bbed34b16bf7ac567dcc69885362ba 379 Gene3D G3DSA:3.40.50.620 1 226 4.0E-65 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS08455 27bbed34b16bf7ac567dcc69885362ba 379 SUPERFAMILY SSF52374 2 105 3.33E-16 T 23-04-2016 SHYC_RS08455 27bbed34b16bf7ac567dcc69885362ba 379 SUPERFAMILY SSF52374 144 216 3.33E-16 T 23-04-2016 SHYC_RS08455 27bbed34b16bf7ac567dcc69885362ba 379 PANTHER PTHR37825 2 375 2.5E-85 T 23-04-2016 SHYC_RS08455 27bbed34b16bf7ac567dcc69885362ba 379 PANTHER PTHR37825:SF1 2 375 2.5E-85 T 23-04-2016 SHYC_RS02060 dea24725ca543fe188d9895dd53d905f 341 SUPERFAMILY SSF51735 1 264 2.17E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02060 dea24725ca543fe188d9895dd53d905f 341 Gene3D G3DSA:3.40.50.720 5 178 1.3E-39 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02060 dea24725ca543fe188d9895dd53d905f 341 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 284 331 4.5E-20 T 23-04-2016 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 SHYC_RS02060 dea24725ca543fe188d9895dd53d905f 341 PANTHER PTHR10366:SF360 6 259 8.2E-172 T 23-04-2016 SHYC_RS02060 dea24725ca543fe188d9895dd53d905f 341 PANTHER PTHR10366:SF360 278 330 8.2E-172 T 23-04-2016 SHYC_RS02060 dea24725ca543fe188d9895dd53d905f 341 Pfam PF02719 Polysaccharide biosynthesis protein 7 281 1.3E-104 T 23-04-2016 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain SHYC_RS02060 dea24725ca543fe188d9895dd53d905f 341 Gene3D G3DSA:3.90.25.10 179 257 5.6E-8 T 23-04-2016 SHYC_RS02060 dea24725ca543fe188d9895dd53d905f 341 PANTHER PTHR10366 6 259 8.2E-172 T 23-04-2016 SHYC_RS02060 dea24725ca543fe188d9895dd53d905f 341 PANTHER PTHR10366 278 330 8.2E-172 T 23-04-2016 SHYC_RS00940 a56a35cc90eee9484855f4eb2aa0081d 1051 Pfam PF16592 REC lobe of CRISPR-associated endonuclease Cas9 229 406 3.0E-16 T 23-04-2016 IPR032240 CRISPR-associated endonuclease Cas9, REC lobe SHYC_RS00940 a56a35cc90eee9484855f4eb2aa0081d 1051 Pfam PF13395 HNH endonuclease 536 591 3.4E-20 T 23-04-2016 IPR003615 HNH nuclease SHYC_RS00940 a56a35cc90eee9484855f4eb2aa0081d 1051 Hamap MF_01480 CRISPR-associated endonuclease Cas9 [cas9]. 2 1041 16.177 T 23-04-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 SHYC_RS00940 a56a35cc90eee9484855f4eb2aa0081d 1051 TIGRFAM TIGR01865 cas_Csn1: CRISPR subtype II RNA-guided endonuclease Cas9 3 739 5.4E-139 T 23-04-2016 IPR028629 CRISPR-associated endonuclease Cas9 GO:0004519 SHYC_RS01045 f4f6001298bf0b178af919735989912c 530 PANTHER PTHR30003 1 530 2.5E-146 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SHYC_RS01045 f4f6001298bf0b178af919735989912c 530 Pfam PF02652 L-lactate permease 3 524 4.5E-100 T 23-04-2016 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 SHYC_RS01045 f4f6001298bf0b178af919735989912c 530 PANTHER PTHR30003:SF4 1 530 2.5E-146 T 23-04-2016 SHYC_RS06225 3df122f5355c831357c049dee7238b1e 255 Pfam PF00899 ThiF family 6 159 8.4E-34 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHYC_RS06225 3df122f5355c831357c049dee7238b1e 255 Gene3D G3DSA:3.40.50.720 3 245 2.3E-45 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS06225 3df122f5355c831357c049dee7238b1e 255 SUPERFAMILY SSF69572 4 246 4.84E-58 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHYC_RS06225 3df122f5355c831357c049dee7238b1e 255 PANTHER PTHR10953:SF145 4 158 4.1E-80 T 23-04-2016 SHYC_RS06225 3df122f5355c831357c049dee7238b1e 255 PANTHER PTHR10953:SF145 184 247 4.1E-80 T 23-04-2016 SHYC_RS06225 3df122f5355c831357c049dee7238b1e 255 PANTHER PTHR10953 4 158 4.1E-80 T 23-04-2016 SHYC_RS06225 3df122f5355c831357c049dee7238b1e 255 PANTHER PTHR10953 184 247 4.1E-80 T 23-04-2016 SHYC_RS02890 c0955412c64471dcf75acd6849604794 305 Gene3D G3DSA:3.40.50.1980 33 151 3.2E-25 T 23-04-2016 SHYC_RS02890 c0955412c64471dcf75acd6849604794 305 PANTHER PTHR30532:SF5 1 305 9.5E-99 T 23-04-2016 SHYC_RS02890 c0955412c64471dcf75acd6849604794 305 Gene3D G3DSA:3.40.50.1980 161 302 8.2E-22 T 23-04-2016 SHYC_RS02890 c0955412c64471dcf75acd6849604794 305 SUPERFAMILY SSF53807 37 298 9.03E-46 T 23-04-2016 SHYC_RS02890 c0955412c64471dcf75acd6849604794 305 Pfam PF01497 Periplasmic binding protein 54 281 5.2E-26 T 23-04-2016 IPR002491 ABC transporter periplasmic binding domain GO:0005488 SHYC_RS02890 c0955412c64471dcf75acd6849604794 305 PANTHER PTHR30532 1 305 9.5E-99 T 23-04-2016 SHYC_RS09065 977792263f69ea560135db6c1ee84203 284 PANTHER PTHR11079:SF73 20 284 6.8E-58 T 23-04-2016 SHYC_RS09065 977792263f69ea560135db6c1ee84203 284 Pfam PF00849 RNA pseudouridylate synthase 84 228 1.5E-22 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS09065 977792263f69ea560135db6c1ee84203 284 PANTHER PTHR11079 20 284 6.8E-58 T 23-04-2016 SHYC_RS09065 977792263f69ea560135db6c1ee84203 284 SUPERFAMILY SSF55120 67 282 1.92E-53 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS08660 299312433a4fcb67f69c66e0e3f4f4a7 450 PANTHER PTHR30365:SF3 1 450 1.1E-240 T 23-04-2016 SHYC_RS08660 299312433a4fcb67f69c66e0e3f4f4a7 450 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 431 2.7E-127 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 SHYC_RS08660 299312433a4fcb67f69c66e0e3f4f4a7 450 PANTHER PTHR30365 1 450 1.1E-240 T 23-04-2016 SHYC_RS08660 299312433a4fcb67f69c66e0e3f4f4a7 450 PIRSF PIRSF006446 1 450 9.1E-129 T 23-04-2016 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0016020 SHYC_RS08315 37a48fb69943c2b1bc8a4401594b8f6c 537 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 537 27.801 T 23-04-2016 IPR011199 Bacillithiol biosynthesis BshC SHYC_RS08315 37a48fb69943c2b1bc8a4401594b8f6c 537 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 11 534 2.9E-162 T 23-04-2016 IPR011199 Bacillithiol biosynthesis BshC SHYC_RS08315 37a48fb69943c2b1bc8a4401594b8f6c 537 Pfam PF10079 Uncharacterized protein conserved in bacteria (DUF2317) 1 526 5.1E-148 T 23-04-2016 IPR011199 Bacillithiol biosynthesis BshC SHYC_RS08315 37a48fb69943c2b1bc8a4401594b8f6c 537 PANTHER PTHR41301 2 537 4.3E-180 T 23-04-2016 SHYC_RS08315 37a48fb69943c2b1bc8a4401594b8f6c 537 PIRSF PIRSF012535 1 537 3.6E-179 T 23-04-2016 IPR011199 Bacillithiol biosynthesis BshC SHYC_RS01765 38823cfef6063197df842df63b1efcf0 1065 PANTHER PTHR37316 506 1065 1.2E-54 T 23-04-2016 SHYC_RS01765 38823cfef6063197df842df63b1efcf0 1065 SUPERFAMILY SSF53756 807 1058 1.88E-12 T 23-04-2016 SHYC_RS01765 38823cfef6063197df842df63b1efcf0 1065 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 299 650 3.5E-50 T 23-04-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 SHYC_RS01765 38823cfef6063197df842df63b1efcf0 1065 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 695 1061 1.0E-111 T 23-04-2016 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 SHYC_RS01765 38823cfef6063197df842df63b1efcf0 1065 SUPERFAMILY SSF53756 420 649 3.86E-16 T 23-04-2016 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 SMART SM00562 1 138 9.8E-87 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 6.5E-47 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 6.5E-47 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 6.5E-47 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 6.5E-47 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 6.5E-47 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 23-04-2016 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 Pfam PF00334 Nucleoside diphosphate kinase 2 135 8.5E-57 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 SUPERFAMILY SSF54919 1 149 2.75E-59 T 23-04-2016 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 Gene3D G3DSA:3.30.70.141 1 149 1.7E-63 T 23-04-2016 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 36.213 T 23-04-2016 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 SHYC_RS06985 ff656483fb42e8e91cc25491f9dc2d55 149 PANTHER PTHR11349 1 149 4.0E-88 T 23-04-2016 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 382 398 1.2E-23 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 300 309 1.2E-23 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 185 203 1.2E-23 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 498 512 1.2E-23 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 1.2E-23 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 Pfam PF01751 Toprim domain 4 133 3.9E-16 T 23-04-2016 IPR006171 Toprim domain SHYC_RS03045 da656892f65de8af920f69c506de5468 710 Gene3D G3DSA:2.70.20.10 355 456 4.0E-22 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 Gene3D G3DSA:2.70.20.10 210 241 4.0E-22 T 23-04-2016 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 Pfam PF01131 DNA topoisomerase 152 570 4.0E-107 T 23-04-2016 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 294 309 - T 23-04-2016 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 Gene3D G3DSA:3.40.50.140 3 151 1.1E-46 T 23-04-2016 IPR006171 Toprim domain SHYC_RS03045 da656892f65de8af920f69c506de5468 710 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 698 3.1E-197 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 SMART SM00436 125 215 1.5E-37 T 23-04-2016 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 SMART SM00437 257 535 1.9E-56 T 23-04-2016 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 PANTHER PTHR11390:SF21 498 668 1.2E-173 T 23-04-2016 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 PANTHER PTHR11390:SF21 1 478 1.2E-173 T 23-04-2016 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 Gene3D G3DSA:1.10.460.10 155 209 6.7E-23 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 Gene3D G3DSA:1.10.460.10 252 354 6.7E-23 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 Gene3D G3DSA:1.10.460.10 457 584 4.8E-29 T 23-04-2016 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 SUPERFAMILY SSF56712 2 585 1.83E-161 T 23-04-2016 IPR023405 DNA topoisomerase, type IA, core domain SHYC_RS03045 da656892f65de8af920f69c506de5468 710 SMART SM00493 2 125 5.9E-15 T 23-04-2016 IPR006171 Toprim domain SHYC_RS03045 da656892f65de8af920f69c506de5468 710 PANTHER PTHR11390 498 668 1.2E-173 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 PANTHER PTHR11390 1 478 1.2E-173 T 23-04-2016 IPR000380 DNA topoisomerase, type IA GO:0003677|GO:0003917|GO:0006265 SHYC_RS03045 da656892f65de8af920f69c506de5468 710 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 624 58.611 T 23-04-2016 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 SHYC_RS09405 097321578103a1f126fad0ad3b321f53 305 PANTHER PTHR10949 2 297 3.8E-166 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SHYC_RS09405 097321578103a1f126fad0ad3b321f53 305 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 4 46 2.1E-11 T 23-04-2016 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SHYC_RS09405 097321578103a1f126fad0ad3b321f53 305 TIGRFAM TIGR00510 lipA: lipoyl synthase 2 294 8.5E-122 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SHYC_RS09405 097321578103a1f126fad0ad3b321f53 305 SMART SM00729 58 266 1.7E-16 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHYC_RS09405 097321578103a1f126fad0ad3b321f53 305 PIRSF PIRSF005963 1 305 1.0E-136 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SHYC_RS09405 097321578103a1f126fad0ad3b321f53 305 SUPERFAMILY SSF102114 21 290 9.03E-65 T 23-04-2016 SHYC_RS09405 097321578103a1f126fad0ad3b321f53 305 Hamap MF_00206 Lipoyl synthase [lipA]. 1 297 147.971 T 23-04-2016 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|UniPathway: UPA00538 SHYC_RS09405 097321578103a1f126fad0ad3b321f53 305 Pfam PF04055 Radical SAM superfamily 65 225 1.4E-13 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS09405 097321578103a1f126fad0ad3b321f53 305 Gene3D G3DSA:3.20.20.70 27 290 3.2E-67 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS10165 606ab9c458f7eccae483f5f8d0887071 310 Pfam PF13460 NAD(P)H-binding 9 120 3.3E-7 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS10165 606ab9c458f7eccae483f5f8d0887071 310 Gene3D G3DSA:3.40.50.720 4 200 2.6E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS10165 606ab9c458f7eccae483f5f8d0887071 310 SUPERFAMILY SSF51735 4 112 5.72E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS04270 38af7680fbff7d304d14f2c73b267037 436 Pfam PF08353 Domain of unknown function (DUF1727) 313 421 2.5E-27 T 23-04-2016 IPR013564 Domain of unknown function DUF1727 SHYC_RS04270 38af7680fbff7d304d14f2c73b267037 436 PANTHER PTHR23135 247 407 4.6E-125 T 23-04-2016 SHYC_RS04270 38af7680fbff7d304d14f2c73b267037 436 PANTHER PTHR23135 30 220 4.6E-125 T 23-04-2016 SHYC_RS04270 38af7680fbff7d304d14f2c73b267037 436 PANTHER PTHR23135:SF7 247 407 4.6E-125 T 23-04-2016 SHYC_RS04270 38af7680fbff7d304d14f2c73b267037 436 PANTHER PTHR23135:SF7 30 220 4.6E-125 T 23-04-2016 SHYC_RS04270 38af7680fbff7d304d14f2c73b267037 436 Pfam PF08245 Mur ligase middle domain 53 274 8.9E-19 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS04270 38af7680fbff7d304d14f2c73b267037 436 SUPERFAMILY SSF53623 50 190 1.49E-31 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS04270 38af7680fbff7d304d14f2c73b267037 436 SUPERFAMILY SSF53623 235 292 1.49E-31 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS04270 38af7680fbff7d304d14f2c73b267037 436 Gene3D G3DSA:3.40.1190.10 224 293 1.1E-37 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS04270 38af7680fbff7d304d14f2c73b267037 436 Gene3D G3DSA:3.40.1190.10 39 187 1.1E-37 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS00315 d152e1761df9d956d31996cdfa9a6441 477 Pfam PF11621 C3 binding domain 4 of IgG-bind protein SBI 247 311 1.4E-15 T 23-04-2016 IPR021657 Immunoglobulin-binding protein Sbi, domain IV SHYC_RS00315 d152e1761df9d956d31996cdfa9a6441 477 Pfam PF11621 C3 binding domain 4 of IgG-bind protein SBI 175 237 2.0E-20 T 23-04-2016 IPR021657 Immunoglobulin-binding protein Sbi, domain IV SHYC_RS00315 d152e1761df9d956d31996cdfa9a6441 477 Pfam PF02216 B domain 46 92 6.8E-20 T 23-04-2016 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 SHYC_RS00315 d152e1761df9d956d31996cdfa9a6441 477 Pfam PF02216 B domain 95 138 5.7E-12 T 23-04-2016 IPR003132 Protein A, Ig-binding domain GO:0009405|GO:0019865 SHYC_RS00315 d152e1761df9d956d31996cdfa9a6441 477 SUPERFAMILY SSF46997 49 98 2.38E-15 T 23-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 SHYC_RS00315 d152e1761df9d956d31996cdfa9a6441 477 Gene3D G3DSA:1.20.5.420 100 139 2.0E-10 T 23-04-2016 SHYC_RS00315 d152e1761df9d956d31996cdfa9a6441 477 Gene3D G3DSA:1.20.5.420 47 97 6.5E-18 T 23-04-2016 SHYC_RS00315 d152e1761df9d956d31996cdfa9a6441 477 SUPERFAMILY SSF46997 101 142 1.28E-8 T 23-04-2016 IPR009063 Immunoglobulin/albumin-binding domain GO:0009405 SHYC_RS01060 a3d01783dba5eaf4b0c5af9b88bef512 518 TIGRFAM TIGR03713 acc_sec_asp1: accessory Sec system protein Asp1 1 511 2.2E-172 T 23-04-2016 IPR022372 Accessory secretory system protein Asp1 GO:0015031 SHYC_RS01060 a3d01783dba5eaf4b0c5af9b88bef512 518 Pfam PF16993 Accessory Sec system protein Asp1 1 511 4.3E-94 T 23-04-2016 IPR022372 Accessory secretory system protein Asp1 GO:0015031 SHYC_RS11365 f9504258319891a4119dc95aa4371cd7 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 450 2.4E-79 T 23-04-2016 IPR000914 Solute-binding protein family 5 domain SHYC_RS11365 f9504258319891a4119dc95aa4371cd7 532 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 79 101 - T 23-04-2016 IPR023765 Solute-binding protein family 5, conserved site SHYC_RS11365 f9504258319891a4119dc95aa4371cd7 532 PANTHER PTHR30290 1 515 8.1E-160 T 23-04-2016 SHYC_RS11365 f9504258319891a4119dc95aa4371cd7 532 Gene3D G3DSA:3.10.105.10 291 501 1.0E-37 T 23-04-2016 SHYC_RS11365 f9504258319891a4119dc95aa4371cd7 532 PIRSF PIRSF002741 1 532 6.7E-85 T 23-04-2016 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 SHYC_RS11365 f9504258319891a4119dc95aa4371cd7 532 PANTHER PTHR30290:SF25 1 515 8.1E-160 T 23-04-2016 SHYC_RS11365 f9504258319891a4119dc95aa4371cd7 532 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 30 530 1.5E-199 T 23-04-2016 IPR011980 Periplasmic nickel-binding protein GO:0015675|GO:0016151|GO:0020037 SHYC_RS11365 f9504258319891a4119dc95aa4371cd7 532 SUPERFAMILY SSF53850 31 525 3.02E-106 T 23-04-2016 SHYC_RS11365 f9504258319891a4119dc95aa4371cd7 532 Gene3D G3DSA:3.40.190.10 136 290 3.2E-36 T 23-04-2016 SHYC_RS01960 320883abf895b0e825ce54a7a339fb7c 284 PANTHER PTHR33308:SF2 180 271 1.4E-26 T 23-04-2016 SHYC_RS01960 320883abf895b0e825ce54a7a339fb7c 284 PANTHER PTHR33308 180 271 1.4E-26 T 23-04-2016 SHYC_RS01960 320883abf895b0e825ce54a7a339fb7c 284 Pfam PF05257 CHAP domain 182 258 5.9E-15 T 23-04-2016 IPR007921 CHAP domain SHYC_RS01960 320883abf895b0e825ce54a7a339fb7c 284 SUPERFAMILY SSF54001 162 279 4.12E-19 T 23-04-2016 SHYC_RS09165 0c9350302a857eda1d0e56b199062daa 66 Pfam PF11151 Protein of unknown function (DUF2929) 1 56 5.8E-17 T 23-04-2016 IPR021324 Protein of unknown function DUF2929 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 PRINTS PR00086 L-lactate dehydrogenase signature 170 183 5.8E-27 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 PRINTS PR00086 L-lactate dehydrogenase signature 2 26 5.8E-27 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 PRINTS PR00086 L-lactate dehydrogenase signature 140 158 5.8E-27 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 PRINTS PR00086 L-lactate dehydrogenase signature 116 136 5.8E-27 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 PRINTS PR00086 L-lactate dehydrogenase signature 27 51 5.8E-27 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 Gene3D G3DSA:3.40.50.720 1 145 2.0E-32 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 145 303 3.6E-13 T 23-04-2016 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 PANTHER PTHR11540:SF3 1 303 2.4E-68 T 23-04-2016 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 Gene3D G3DSA:3.90.110.10 147 303 2.9E-42 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 SUPERFAMILY SSF51735 1 144 4.23E-31 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 PIRSF PIRSF000102 1 308 1.0E-79 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 SUPERFAMILY SSF56327 143 303 5.48E-37 T 23-04-2016 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 142 7.0E-26 T 23-04-2016 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 SHYC_RS00445 1d01b89f935c8fbba90d22e5960b2ce7 308 PANTHER PTHR11540 1 303 2.4E-68 T 23-04-2016 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 SHYC_RS06660 2d12154b656dcb38c465ae28c9dc0f8f 355 PANTHER PTHR30012 19 354 1.5E-59 T 23-04-2016 SHYC_RS06660 2d12154b656dcb38c465ae28c9dc0f8f 355 Pfam PF00482 Type II secretion system (T2SS), protein F 224 345 8.6E-16 T 23-04-2016 IPR018076 Type II secretion system F domain SHYC_RS06660 2d12154b656dcb38c465ae28c9dc0f8f 355 Pfam PF00482 Type II secretion system (T2SS), protein F 28 138 5.3E-8 T 23-04-2016 IPR018076 Type II secretion system F domain SHYC_RS06660 2d12154b656dcb38c465ae28c9dc0f8f 355 PRINTS PR00812 Bacterial general secretion pathway protein F signature 318 332 7.3E-7 T 23-04-2016 IPR003004 GspF/PilC family SHYC_RS06660 2d12154b656dcb38c465ae28c9dc0f8f 355 PRINTS PR00812 Bacterial general secretion pathway protein F signature 334 353 7.3E-7 T 23-04-2016 IPR003004 GspF/PilC family SHYC_RS06660 2d12154b656dcb38c465ae28c9dc0f8f 355 PRINTS PR00812 Bacterial general secretion pathway protein F signature 116 144 7.3E-7 T 23-04-2016 IPR003004 GspF/PilC family SHYC_RS11740 036a51e661dc22b990cbe53f8326afd6 285 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 26 200 4.9E-53 T 23-04-2016 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 SHYC_RS11740 036a51e661dc22b990cbe53f8326afd6 285 Gene3D G3DSA:3.90.1530.10 22 124 1.8E-37 T 23-04-2016 SHYC_RS11740 036a51e661dc22b990cbe53f8326afd6 285 Pfam PF02195 ParB-like nuclease domain 30 119 2.5E-27 T 23-04-2016 IPR003115 ParB/Sulfiredoxin SHYC_RS11740 036a51e661dc22b990cbe53f8326afd6 285 SMART SM00470 29 119 9.1E-33 T 23-04-2016 IPR003115 ParB/Sulfiredoxin SHYC_RS11740 036a51e661dc22b990cbe53f8326afd6 285 PANTHER PTHR33375 12 253 6.4E-80 T 23-04-2016 SHYC_RS11740 036a51e661dc22b990cbe53f8326afd6 285 SUPERFAMILY SSF110849 28 164 8.89E-32 T 23-04-2016 IPR003115 ParB/Sulfiredoxin SHYC_RS11765 f05bac1df87f819c12367766cb9808ed 45 Pfam PF00468 Ribosomal protein L34 3 45 8.0E-23 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11765 f05bac1df87f819c12367766cb9808ed 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 23-04-2016 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11765 f05bac1df87f819c12367766cb9808ed 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 7.9E-20 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11765 f05bac1df87f819c12367766cb9808ed 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 27 2.0E-7 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11765 f05bac1df87f819c12367766cb9808ed 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 15.729 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS11765 f05bac1df87f819c12367766cb9808ed 45 PANTHER PTHR14503 1 45 3.7E-20 T 23-04-2016 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 PANTHER PTHR11070 1 726 2.2E-253 T 23-04-2016 IPR000212 DNA helicase, UvrD/REP type GO:0003677|GO:0004003|GO:0005524 SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 Gene3D G3DSA:3.40.50.300 3 108 1.9E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 Gene3D G3DSA:3.40.50.300 187 284 1.9E-75 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 Gene3D G3DSA:3.40.50.300 548 639 5.6E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 Gene3D G3DSA:3.40.50.300 285 386 5.6E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 SUPERFAMILY SSF52540 2 639 3.04E-182 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 4 725 0.0 T 23-04-2016 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 Gene3D G3DSA:1.10.486.10 387 534 1.2E-45 T 23-04-2016 SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 PANTHER PTHR11070:SF7 1 726 2.2E-253 T 23-04-2016 SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 Pfam PF13361 UvrD-like helicase C-terminal domain 276 614 1.9E-77 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 Pfam PF00580 UvrD/REP helicase N-terminal domain 8 270 5.2E-84 T 23-04-2016 IPR014016 UvrD-like Helicase, ATP-binding domain GO:0005524 SHYC_RS04200 ddeabefebaeb079a3e4022d5d1fa600f 729 Gene3D G3DSA:1.10.10.160 112 186 3.7E-27 T 23-04-2016 IPR013986 DExx box DNA helicase domain SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 Pfam PF12631 MnmE helical domain 128 457 4.1E-56 T 23-04-2016 IPR025867 MnmE, helical domain SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 226 372 5.6E-27 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 Gene3D G3DSA:3.40.50.300 292 390 2.2E-12 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 125 2.0E-37 T 23-04-2016 IPR018948 GTP-binding protein TrmE, N-terminal SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 12 460 1.2E-128 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 SUPERFAMILY SSF116878 385 460 3.66E-48 T 23-04-2016 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 SUPERFAMILY SSF116878 126 226 3.66E-48 T 23-04-2016 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 PANTHER PTHR11649:SF56 8 460 1.6E-160 T 23-04-2016 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 SUPERFAMILY SSF52540 210 373 9.03E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 SUPERFAMILY SSF52540 79 175 9.03E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 Gene3D G3DSA:3.40.50.300 206 252 8.2E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 Pfam PF01926 50S ribosome-binding GTPase 226 337 1.0E-24 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 460 33.642 T 23-04-2016 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 Gene3D G3DSA:3.30.1360.120 2 126 2.3E-42 T 23-04-2016 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 Gene3D G3DSA:1.20.120.430 391 460 1.2E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 Gene3D G3DSA:1.20.120.430 253 277 1.2E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 Gene3D G3DSA:1.20.120.430 127 187 1.2E-53 T 23-04-2016 IPR027368 tRNA modification GTPase MnmE domain 2 SHYC_RS11755 9a73cddecef3bd22efff4b876ec3f9d2 460 PANTHER PTHR11649 8 460 1.6E-160 T 23-04-2016 SHYC_RS04625 3b839f6d572f1bc6092a2754ba590256 508 SUPERFAMILY SSF53067 128 304 3.56E-41 T 23-04-2016 SHYC_RS04625 3b839f6d572f1bc6092a2754ba590256 508 SUPERFAMILY SSF53067 4 125 5.5E-28 T 23-04-2016 SHYC_RS04625 3b839f6d572f1bc6092a2754ba590256 508 PIRSF PIRSF001267 3 507 2.3E-73 T 23-04-2016 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SHYC_RS04625 3b839f6d572f1bc6092a2754ba590256 508 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 5 302 3.0E-96 T 23-04-2016 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 SHYC_RS04625 3b839f6d572f1bc6092a2754ba590256 508 PANTHER PTHR30005 5 466 5.7E-102 T 23-04-2016 SHYC_RS04625 3b839f6d572f1bc6092a2754ba590256 508 Pfam PF02541 Ppx/GppA phosphatase family 27 302 6.3E-53 T 23-04-2016 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40|UniPathway: UPA00908 SHYC_RS04625 3b839f6d572f1bc6092a2754ba590256 508 Gene3D G3DSA:3.30.420.40 1 124 2.0E-32 T 23-04-2016 SHYC_RS04625 3b839f6d572f1bc6092a2754ba590256 508 Gene3D G3DSA:3.30.420.150 129 304 2.8E-45 T 23-04-2016 SHYC_RS04625 3b839f6d572f1bc6092a2754ba590256 508 PANTHER PTHR30005:SF0 5 466 5.7E-102 T 23-04-2016 SHYC_RS04625 3b839f6d572f1bc6092a2754ba590256 508 SUPERFAMILY SSF109604 315 506 1.51E-28 T 23-04-2016 SHYC_RS00840 d34fdb296403024e5906dad750f3f3da 475 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 10 474 1.4E-183 T 23-04-2016 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 SHYC_RS00840 d34fdb296403024e5906dad750f3f3da 475 Pfam PF13520 Amino acid permease 15 415 5.8E-68 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS00840 d34fdb296403024e5906dad750f3f3da 475 PIRSF PIRSF006060 3 474 8.9E-50 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS00840 d34fdb296403024e5906dad750f3f3da 475 PANTHER PTHR11785 5 468 5.4E-222 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS00840 d34fdb296403024e5906dad750f3f3da 475 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 6 473 5.5E-169 T 23-04-2016 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 SHYC_RS00840 d34fdb296403024e5906dad750f3f3da 475 PANTHER PTHR11785:SF77 5 468 5.4E-222 T 23-04-2016 SHYC_RS11555 08a87fca419a4b61b82fb8fe9f020e74 157 ProDom PD096809 MEMBRANE BIOX SA2210 PROBABLE PROTEIN BIOSYNTHESIS TRANSMEMBRANE BIOTIN MW2345 1 149 3.0E-37 T 23-04-2016 IPR020345 Biotin biosynthesis BioX SHYC_RS05830 f11846dcae9c1fc5d97b467f8a706668 317 SUPERFAMILY SSF51735 1 314 2.52E-77 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05830 f11846dcae9c1fc5d97b467f8a706668 317 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 2 314 8.6E-56 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin SHYC_RS05830 f11846dcae9c1fc5d97b467f8a706668 317 PIRSF PIRSF001439 1 316 3.9E-71 T 23-04-2016 IPR003462 Ornithine cyclodeaminase/mu-crystallin SHYC_RS05830 f11846dcae9c1fc5d97b467f8a706668 317 PANTHER PTHR13812:SF19 1 313 6.9E-81 T 23-04-2016 SHYC_RS05830 f11846dcae9c1fc5d97b467f8a706668 317 PANTHER PTHR13812 1 313 6.9E-81 T 23-04-2016 SHYC_RS05830 f11846dcae9c1fc5d97b467f8a706668 317 Gene3D G3DSA:3.40.50.720 137 298 3.2E-47 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05830 f11846dcae9c1fc5d97b467f8a706668 317 Gene3D G3DSA:3.30.1780.10 1 136 3.6E-38 T 23-04-2016 IPR023401 Ornithine cyclodeaminase, N-terminal SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 156 313 5.3E-61 T 23-04-2016 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 Gene3D G3DSA:3.40.50.720 1 159 1.8E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 PIRSF PIRSF000149 1 335 2.6E-118 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.6E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 145 163 2.6E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 230 247 2.6E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 2.6E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 172 188 2.6E-32 T 23-04-2016 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 Gene3D G3DSA:3.30.360.10 160 315 7.6E-68 T 23-04-2016 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 4.4E-134 T 23-04-2016 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 SMART SM00846 3 151 4.9E-87 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 SUPERFAMILY SSF55347 151 314 2.2E-62 T 23-04-2016 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 SUPERFAMILY SSF51735 1 150 5.04E-59 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 149 156 - T 23-04-2016 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS09575 9bbd538430535448ab20a8d5b6255a42 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 151 4.4E-57 T 23-04-2016 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: REACT_474 SHYC_RS02045 4decec5d17eac601078f5a90aea2e91c 235 Gene3D G3DSA:3.40.50.300 50 226 1.5E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02045 4decec5d17eac601078f5a90aea2e91c 235 PANTHER PTHR32309:SF14 12 231 6.2E-57 T 23-04-2016 SHYC_RS02045 4decec5d17eac601078f5a90aea2e91c 235 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 29 231 2.4E-77 T 23-04-2016 IPR005702 Exopolysaccharide synthesis protein GO:0045226 SHYC_RS02045 4decec5d17eac601078f5a90aea2e91c 235 PANTHER PTHR32309 12 231 6.2E-57 T 23-04-2016 SHYC_RS02045 4decec5d17eac601078f5a90aea2e91c 235 SUPERFAMILY SSF52540 50 228 9.18E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02045 4decec5d17eac601078f5a90aea2e91c 235 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 50 225 1.5E-18 T 23-04-2016 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain SHYC_RS06320 c18c43427d1c355770f32df9a1295b4a 243 SMART SM00796 1 203 1.6E-89 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SHYC_RS06320 c18c43427d1c355770f32df9a1295b4a 243 Pfam PF02682 Allophanate hydrolase subunit 1 1 202 1.0E-70 T 23-04-2016 IPR003833 Carboxyltransferase domain, subdomain C and D SHYC_RS06320 c18c43427d1c355770f32df9a1295b4a 243 PANTHER PTHR34698:SF2 1 243 4.0E-99 T 23-04-2016 SHYC_RS06320 c18c43427d1c355770f32df9a1295b4a 243 Gene3D G3DSA:3.30.1360.40 1 71 4.4E-16 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain SHYC_RS06320 c18c43427d1c355770f32df9a1295b4a 243 SUPERFAMILY SSF160467 3 93 1.29E-15 T 23-04-2016 SHYC_RS06320 c18c43427d1c355770f32df9a1295b4a 243 Gene3D G3DSA:2.40.100.10 89 224 2.2E-54 T 23-04-2016 IPR029000 Cyclophilin-like domain SHYC_RS06320 c18c43427d1c355770f32df9a1295b4a 243 SUPERFAMILY SSF50891 90 219 1.4E-48 T 23-04-2016 IPR029000 Cyclophilin-like domain SHYC_RS06320 c18c43427d1c355770f32df9a1295b4a 243 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 6 211 7.5E-67 T 23-04-2016 IPR010016 KipI family SHYC_RS06320 c18c43427d1c355770f32df9a1295b4a 243 PANTHER PTHR34698 1 243 4.0E-99 T 23-04-2016 SHYC_RS05715 b8b2d7c11f64cc9b7a0d5e6dbdd57dd9 356 Gene3D G3DSA:3.40.630.10 1 73 4.4E-77 T 23-04-2016 SHYC_RS05715 b8b2d7c11f64cc9b7a0d5e6dbdd57dd9 356 Gene3D G3DSA:3.40.630.10 168 353 4.4E-77 T 23-04-2016 SHYC_RS05715 b8b2d7c11f64cc9b7a0d5e6dbdd57dd9 356 PIRSF PIRSF001123 2 355 6.0E-128 T 23-04-2016 IPR008007 Peptidase M42 SHYC_RS05715 b8b2d7c11f64cc9b7a0d5e6dbdd57dd9 356 PANTHER PTHR32481:SF0 1 355 2.4E-154 T 23-04-2016 SHYC_RS05715 b8b2d7c11f64cc9b7a0d5e6dbdd57dd9 356 Pfam PF05343 M42 glutamyl aminopeptidase 46 335 1.2E-93 T 23-04-2016 IPR008007 Peptidase M42 SHYC_RS05715 b8b2d7c11f64cc9b7a0d5e6dbdd57dd9 356 PANTHER PTHR32481 1 355 2.4E-154 T 23-04-2016 SHYC_RS05715 b8b2d7c11f64cc9b7a0d5e6dbdd57dd9 356 SUPERFAMILY SSF53187 5 82 4.78E-64 T 23-04-2016 SHYC_RS05715 b8b2d7c11f64cc9b7a0d5e6dbdd57dd9 356 SUPERFAMILY SSF53187 171 348 4.78E-64 T 23-04-2016 SHYC_RS05715 b8b2d7c11f64cc9b7a0d5e6dbdd57dd9 356 SUPERFAMILY SSF101821 72 179 1.31E-25 T 23-04-2016 SHYC_RS05715 b8b2d7c11f64cc9b7a0d5e6dbdd57dd9 356 Gene3D G3DSA:2.40.30.40 74 161 1.1E-26 T 23-04-2016 IPR023367 Peptidase M42, domain 2 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 Gene3D G3DSA:3.40.120.10 177 251 1.7E-21 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 Gene3D G3DSA:3.40.120.10 252 371 1.4E-37 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 371 5.7E-33 T 23-04-2016 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 23-04-2016 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 375 443 2.6E-18 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 SUPERFAMILY SSF53738 3 181 7.46E-47 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 160 255 9.9E-18 T 23-04-2016 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 SUPERFAMILY SSF53738 159 258 5.49E-26 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 444 3.7E-185 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 Gene3D G3DSA:3.40.120.10 3 141 7.4E-44 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 SUPERFAMILY SSF53738 259 367 1.02E-30 T 23-04-2016 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 136 6.4E-42 T 23-04-2016 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 446 45.054 T 23-04-2016 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 3.9E-12 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 3.9E-12 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 3.9E-12 T 23-04-2016 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 PANTHER PTHR22573:SF15 1 448 1.3E-171 T 23-04-2016 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 Gene3D G3DSA:3.30.310.50 372 445 1.4E-21 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 PANTHER PTHR22573 1 448 1.3E-171 T 23-04-2016 SHYC_RS03445 a12bc7edd8057d0cc9fb45f28147a9e8 449 SUPERFAMILY SSF55957 359 448 1.31E-26 T 23-04-2016 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 SHYC_RS10700 1ecf323647c35b1130002f4a1db6091e 190 SUPERFAMILY SSF88946 4 111 9.68E-9 T 23-04-2016 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS10700 1ecf323647c35b1130002f4a1db6091e 190 Gene3D G3DSA:1.10.1740.10 7 96 1.9E-5 T 23-04-2016 SHYC_RS10700 1ecf323647c35b1130002f4a1db6091e 190 SUPERFAMILY SSF46894 125 185 3.27E-8 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHYC_RS10700 1ecf323647c35b1130002f4a1db6091e 190 Gene3D G3DSA:1.10.10.10 136 185 2.1E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS11640 e967103f2fcc4d5bd1769b4160a5a6ea 613 SUPERFAMILY SSF82282 2 362 1.83E-97 T 23-04-2016 IPR003726 Homocysteine-binding domain SHYC_RS11640 e967103f2fcc4d5bd1769b4160a5a6ea 613 PANTHER PTHR21091:SF122 12 346 1.1E-105 T 23-04-2016 SHYC_RS11640 e967103f2fcc4d5bd1769b4160a5a6ea 613 Gene3D G3DSA:3.20.20.330 2 323 3.2E-94 T 23-04-2016 IPR003726 Homocysteine-binding domain SHYC_RS11640 e967103f2fcc4d5bd1769b4160a5a6ea 613 Pfam PF02219 Methylenetetrahydrofolate reductase 317 584 3.0E-26 T 23-04-2016 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|UniPathway: UPA00193 SHYC_RS11640 e967103f2fcc4d5bd1769b4160a5a6ea 613 SUPERFAMILY SSF51730 318 601 3.73E-64 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like SHYC_RS11640 e967103f2fcc4d5bd1769b4160a5a6ea 613 Gene3D G3DSA:3.20.20.220 324 606 9.1E-57 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like SHYC_RS11640 e967103f2fcc4d5bd1769b4160a5a6ea 613 PANTHER PTHR21091 12 346 1.1E-105 T 23-04-2016 SHYC_RS11640 e967103f2fcc4d5bd1769b4160a5a6ea 613 Pfam PF02574 Homocysteine S-methyltransferase 13 280 3.9E-58 T 23-04-2016 IPR003726 Homocysteine-binding domain SHYC_RS04225 a63286c878f5fd5ac0502da86c14e0ad 486 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 478 92.377 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHYC_RS04225 a63286c878f5fd5ac0502da86c14e0ad 486 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 478 1.1E-194 T 23-04-2016 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHYC_RS04225 a63286c878f5fd5ac0502da86c14e0ad 486 Gene3D G3DSA:3.90.1300.10 2 481 1.0E-174 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHYC_RS04225 a63286c878f5fd5ac0502da86c14e0ad 486 SUPERFAMILY SSF75304 1 481 2.09E-157 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHYC_RS04225 a63286c878f5fd5ac0502da86c14e0ad 486 ProSitePatterns PS00571 Amidases signature. 152 183 - T 23-04-2016 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHYC_RS04225 a63286c878f5fd5ac0502da86c14e0ad 486 PANTHER PTHR11895:SF7 2 484 3.5E-222 T 23-04-2016 SHYC_RS04225 a63286c878f5fd5ac0502da86c14e0ad 486 Pfam PF01425 Amidase 24 466 1.5E-155 T 23-04-2016 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHYC_RS04225 a63286c878f5fd5ac0502da86c14e0ad 486 PANTHER PTHR11895 2 484 3.5E-222 T 23-04-2016 IPR000120 Amidase GO:0016884 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 SMART SM00729 51 259 2.6E-35 T 23-04-2016 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 PANTHER PTHR22976 1 317 1.4E-146 T 23-04-2016 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 PIRSF PIRSF001619 1 323 3.2E-118 T 23-04-2016 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 Hamap MF_01694 Biotin synthase [bioB]. 11 318 38.683 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 SMART SM00876 227 317 5.5E-33 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 PANTHER PTHR22976:SF1 1 317 1.4E-146 T 23-04-2016 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 SUPERFAMILY SSF102114 11 317 7.06E-69 T 23-04-2016 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 Pfam PF04055 Radical SAM superfamily 60 215 1.3E-14 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 Gene3D G3DSA:3.20.20.70 11 317 6.8E-82 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 TIGRFAM TIGR00433 bioB: biotin synthase 28 316 7.8E-113 T 23-04-2016 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SHYC_RS11565 35fa44ce12480e28dc6ff93de02f75a2 330 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 227 316 1.2E-15 T 23-04-2016 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380|UniPathway: UPA00078 SHYC_RS05605 f940ad506229b13b5ada3c50e0e3d345 152 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 12 148 3.5E-60 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05605 f940ad506229b13b5ada3c50e0e3d345 152 PANTHER PTHR21058 3 150 8.0E-80 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05605 f940ad506229b13b5ada3c50e0e3d345 152 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 11 149 4.1E-59 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05605 f940ad506229b13b5ada3c50e0e3d345 152 Gene3D G3DSA:3.40.50.960 3 152 3.8E-68 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05605 f940ad506229b13b5ada3c50e0e3d345 152 SUPERFAMILY SSF52121 3 152 7.33E-64 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS05605 f940ad506229b13b5ada3c50e0e3d345 152 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 7 152 30.677 T 23-04-2016 IPR002180 6,7-dimethyl-8-ribityllumazine synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168|UniPathway: UPA00275 SHYC_RS11830 dbb39ec838be029ea3db67d2ca58d878 134 Gene3D G3DSA:2.60.40.1080 24 99 8.1E-12 T 23-04-2016 SHYC_RS11830 dbb39ec838be029ea3db67d2ca58d878 134 SUPERFAMILY SSF49373 23 98 8.83E-13 T 23-04-2016 IPR008964 Invasin/intimin cell-adhesion fragments SHYC_RS11830 dbb39ec838be029ea3db67d2ca58d878 134 SMART SM00635 23 97 5.6E-8 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 SHYC_RS11830 dbb39ec838be029ea3db67d2ca58d878 134 Pfam PF02368 Bacterial Ig-like domain (group 2) 26 94 2.2E-14 T 23-04-2016 IPR003343 Bacterial Ig-like, group 2 SHYC_RS00620 647a527067731b5c764005c186c5444c 591 Pfam PF06100 MCRA family 22 520 2.1E-220 T 23-04-2016 IPR010354 Oleate hydratase GO:0006631|GO:0050151|GO:0071949 UniPathway: UPA00199 SHYC_RS00620 647a527067731b5c764005c186c5444c 591 PANTHER PTHR37417 1 583 0.0 T 23-04-2016 SHYC_RS00620 647a527067731b5c764005c186c5444c 591 SUPERFAMILY SSF51905 28 274 7.77E-16 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00620 647a527067731b5c764005c186c5444c 591 Gene3D G3DSA:3.50.50.60 15 84 7.3E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00620 647a527067731b5c764005c186c5444c 591 Gene3D G3DSA:3.50.50.60 222 284 7.3E-7 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS00620 647a527067731b5c764005c186c5444c 591 PANTHER PTHR37417:SF1 1 583 0.0 T 23-04-2016 SHYC_RS06025 e4b2e3bafc74723f9039f41b75271c37 66 PANTHER PTHR33343 1 66 6.4E-28 T 23-04-2016 SHYC_RS06025 e4b2e3bafc74723f9039f41b75271c37 66 Pfam PF01632 Ribosomal protein L35 2 62 4.9E-26 T 23-04-2016 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06025 e4b2e3bafc74723f9039f41b75271c37 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 2.8E-26 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHYC_RS06025 e4b2e3bafc74723f9039f41b75271c37 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 23-04-2016 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06025 e4b2e3bafc74723f9039f41b75271c37 66 SUPERFAMILY SSF143034 2 64 1.31E-22 T 23-04-2016 SHYC_RS06025 e4b2e3bafc74723f9039f41b75271c37 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 4.5E-21 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHYC_RS06025 e4b2e3bafc74723f9039f41b75271c37 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 4.5E-21 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHYC_RS06025 e4b2e3bafc74723f9039f41b75271c37 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 4.5E-21 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHYC_RS06025 e4b2e3bafc74723f9039f41b75271c37 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.245 T 23-04-2016 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 SHYC_RS03725 5c0e6c9d9774b14439e88fdd98047c15 229 Pfam PF03070 TENA/THI-4/PQQC family 9 217 3.6E-39 T 23-04-2016 IPR004305 Thiaminase-2/PQQC SHYC_RS03725 5c0e6c9d9774b14439e88fdd98047c15 229 PANTHER PTHR20858:SF20 1 182 8.0E-43 T 23-04-2016 SHYC_RS03725 5c0e6c9d9774b14439e88fdd98047c15 229 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 217 3.5E-55 T 23-04-2016 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356|UniPathway: UPA00060 SHYC_RS03725 5c0e6c9d9774b14439e88fdd98047c15 229 PANTHER PTHR20858 1 182 8.0E-43 T 23-04-2016 SHYC_RS03725 5c0e6c9d9774b14439e88fdd98047c15 229 SUPERFAMILY SSF48613 1 216 7.71E-46 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 SHYC_RS03725 5c0e6c9d9774b14439e88fdd98047c15 229 Gene3D G3DSA:1.20.910.10 2 222 1.5E-48 T 23-04-2016 IPR016084 Haem oxygenase-like, multi-helical Reactome: REACT_9431 SHYC_RS00425 08f0183a71a7884cc304cc930ceaad6f 297 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 34 257 1.8E-51 T 23-04-2016 IPR005519 Acid phosphatase, class B-like SHYC_RS00425 08f0183a71a7884cc304cc930ceaad6f 297 Gene3D G3DSA:3.40.50.1000 58 266 1.3E-61 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS00425 08f0183a71a7884cc304cc930ceaad6f 297 PIRSF PIRSF019271 1 287 1.9E-99 T 23-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 SHYC_RS00425 08f0183a71a7884cc304cc930ceaad6f 297 PANTHER PTHR31284:SF10 241 257 1.4E-67 T 23-04-2016 SHYC_RS00425 08f0183a71a7884cc304cc930ceaad6f 297 PANTHER PTHR31284:SF10 42 223 1.4E-67 T 23-04-2016 SHYC_RS00425 08f0183a71a7884cc304cc930ceaad6f 297 TIGRFAM TIGR01533 lipo_e_P4: 5'-nucleotidase, lipoprotein e(P4) family 33 284 1.5E-99 T 23-04-2016 IPR006423 5-nucleotidase lipoprotein e(P4) GO:0009279 SHYC_RS00425 08f0183a71a7884cc304cc930ceaad6f 297 SUPERFAMILY SSF56784 69 265 3.67E-42 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS00425 08f0183a71a7884cc304cc930ceaad6f 297 PANTHER PTHR31284 241 257 1.4E-67 T 23-04-2016 SHYC_RS00425 08f0183a71a7884cc304cc930ceaad6f 297 PANTHER PTHR31284 42 223 1.4E-67 T 23-04-2016 SHYC_RS07190 6fc5f13beeed15a30d8771f48b15a362 204 Pfam PF01569 PAP2 superfamily 84 195 5.6E-22 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SHYC_RS07190 6fc5f13beeed15a30d8771f48b15a362 204 PANTHER PTHR14969 17 204 2.7E-32 T 23-04-2016 SHYC_RS07190 6fc5f13beeed15a30d8771f48b15a362 204 SUPERFAMILY SSF48317 5 199 3.92E-36 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SHYC_RS07190 6fc5f13beeed15a30d8771f48b15a362 204 SMART SM00014 84 195 2.8E-24 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SHYC_RS07190 6fc5f13beeed15a30d8771f48b15a362 204 Gene3D G3DSA:1.20.144.10 49 194 4.2E-28 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 Gene3D G3DSA:3.40.630.10 347 407 3.3E-61 T 23-04-2016 SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 Gene3D G3DSA:3.40.630.10 6 185 3.3E-61 T 23-04-2016 SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 SUPERFAMILY SSF53187 7 176 5.19E-56 T 23-04-2016 SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 SUPERFAMILY SSF53187 323 406 5.19E-56 T 23-04-2016 SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 10 396 8.0E-87 T 23-04-2016 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase GO:0016813 SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 Pfam PF01546 Peptidase family M20/M25/M40 69 403 1.6E-36 T 23-04-2016 IPR002933 Peptidase M20 GO:0008152|GO:0016787 SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 PANTHER PTHR11014 7 409 1.7E-81 T 23-04-2016 SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 67 76 - T 23-04-2016 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 SUPERFAMILY SSF55031 176 222 2.24E-18 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 SUPERFAMILY SSF55031 255 319 2.24E-18 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 Gene3D G3DSA:3.30.70.360 186 307 6.6E-26 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS01415 d71594ed316a300fbf1435e587c2b474 409 Pfam PF07687 Peptidase dimerisation domain 173 303 1.3E-23 T 23-04-2016 IPR011650 Peptidase M20, dimerisation domain SHYC_RS01235 2a9a493e71c19a038a7534af34f85fdb 410 PIRSF PIRSF019466 2 400 5.8E-119 T 23-04-2016 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 SHYC_RS01235 2a9a493e71c19a038a7534af34f85fdb 410 PANTHER PTHR40089 3 402 3.9E-116 T 23-04-2016 SHYC_RS01235 2a9a493e71c19a038a7534af34f85fdb 410 Pfam PF04346 Ethanolamine utilisation protein, EutH 5 385 5.5E-123 T 23-04-2016 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 SHYC_RS11395 6ed2ea63c838472320356b1f93389d84 515 SUPERFAMILY SSF101094 142 273 7.72E-19 T 23-04-2016 IPR014874 Staphylcoagulase, N-terminal SHYC_RS11395 6ed2ea63c838472320356b1f93389d84 515 SUPERFAMILY SSF101094 59 141 1.57E-7 T 23-04-2016 IPR014874 Staphylcoagulase, N-terminal SHYC_RS11395 6ed2ea63c838472320356b1f93389d84 515 Pfam PF08764 Staphylococcus aureus coagulase 47 273 2.6E-17 T 23-04-2016 IPR014874 Staphylcoagulase, N-terminal SHYC_RS10740 366400f88e65b16a0981db217964824e 231 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 224 5.6E-68 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10740 366400f88e65b16a0981db217964824e 231 PANTHER PTHR32125:SF6 1 229 9.0E-73 T 23-04-2016 SHYC_RS10740 366400f88e65b16a0981db217964824e 231 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 3 226 28.0 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10740 366400f88e65b16a0981db217964824e 231 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 6 221 1.5E-67 T 23-04-2016 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560|UniPathway: UPA00056 SHYC_RS10740 366400f88e65b16a0981db217964824e 231 PANTHER PTHR32125 1 229 9.0E-73 T 23-04-2016 SHYC_RS10740 366400f88e65b16a0981db217964824e 231 Gene3D G3DSA:3.90.550.10 2 229 8.4E-70 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS10740 366400f88e65b16a0981db217964824e 231 SUPERFAMILY SSF53448 4 223 1.42E-54 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS06375 240b9ee8e54ebe02a49d0a78e6fd3851 189 Pfam PF01467 Cytidylyltransferase-like 6 163 7.9E-26 T 23-04-2016 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 SHYC_RS06375 240b9ee8e54ebe02a49d0a78e6fd3851 189 SUPERFAMILY SSF52374 1 188 3.44E-41 T 23-04-2016 SHYC_RS06375 240b9ee8e54ebe02a49d0a78e6fd3851 189 Gene3D G3DSA:3.40.50.620 1 188 7.4E-52 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS06375 240b9ee8e54ebe02a49d0a78e6fd3851 189 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 188 1.1E-49 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SHYC_RS06375 240b9ee8e54ebe02a49d0a78e6fd3851 189 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 189 25.389 T 23-04-2016 IPR005248 Probable nicotinate-nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|Reactome: REACT_11193|UniPathway: UPA00253 SHYC_RS06375 240b9ee8e54ebe02a49d0a78e6fd3851 189 PANTHER PTHR39321 1 189 6.8E-27 T 23-04-2016 SHYC_RS04950 0792a0eafcad65fa4a9eca620a636ce4 521 Gene3D G3DSA:3.40.50.300 258 486 8.5E-9 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04950 0792a0eafcad65fa4a9eca620a636ce4 521 Pfam PF03796 DnaB-like helicase C terminal domain 259 403 7.0E-10 T 23-04-2016 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 SHYC_RS04950 0792a0eafcad65fa4a9eca620a636ce4 521 SUPERFAMILY SSF48024 11 120 3.66E-5 T 23-04-2016 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 SHYC_RS04950 0792a0eafcad65fa4a9eca620a636ce4 521 SUPERFAMILY SSF52540 233 469 6.69E-6 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06430 375f608046838aa76bddb4e26d968b21 327 Gene3D G3DSA:3.30.450.40 202 325 1.3E-19 T 23-04-2016 IPR029016 GAF domain-like SHYC_RS06430 375f608046838aa76bddb4e26d968b21 327 SUPERFAMILY SSF46785 1 81 1.5E-20 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06430 375f608046838aa76bddb4e26d968b21 327 PANTHER PTHR34824 1 327 5.7E-79 T 23-04-2016 SHYC_RS06430 375f608046838aa76bddb4e26d968b21 327 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 2 59 1.2E-4 T 23-04-2016 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 SHYC_RS06430 375f608046838aa76bddb4e26d968b21 327 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 326 1.4E-75 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SHYC_RS06430 375f608046838aa76bddb4e26d968b21 327 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 327 24.38 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SHYC_RS06430 375f608046838aa76bddb4e26d968b21 327 Pfam PF01628 HrcA protein C terminal domain 106 320 2.7E-33 T 23-04-2016 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 SHYC_RS06430 375f608046838aa76bddb4e26d968b21 327 SUPERFAMILY SSF55781 71 326 1.45E-38 T 23-04-2016 IPR029016 GAF domain-like SHYC_RS06430 375f608046838aa76bddb4e26d968b21 327 PIRSF PIRSF005485 1 327 2.2E-75 T 23-04-2016 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 SHYC_RS06430 375f608046838aa76bddb4e26d968b21 327 Gene3D G3DSA:1.10.10.10 1 80 3.9E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 Gene3D G3DSA:3.20.20.10 38 280 8.4E-74 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 SUPERFAMILY SSF50621 264 420 1.38E-47 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 299 395 3.3E-18 T 23-04-2016 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 Reactome: REACT_13 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 15 420 37.831 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 305 323 4.4E-21 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 77 94 4.4E-21 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 163 172 4.4E-21 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 PRINTS PR01181 Diaminopimelate decarboxylase signature 387 409 4.4E-21 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 4 419 3.9E-135 T 23-04-2016 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|UniPathway: UPA00034 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 Gene3D G3DSA:2.40.37.10 281 419 1.2E-47 T 23-04-2016 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 Reactome: REACT_13 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 377 390 4.4E-16 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 276 295 4.4E-16 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 4.4E-16 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 79 91 4.4E-16 T 23-04-2016 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 Reactome: REACT_13 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 PANTHER PTHR11482 1 416 1.0E-144 T 23-04-2016 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 286 1.9E-56 T 23-04-2016 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 Reactome: REACT_13 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 PANTHER PTHR11482:SF5 1 416 1.0E-144 T 23-04-2016 SHYC_RS07270 d0ca226d8201f698176ca348298b950b 421 SUPERFAMILY SSF51419 26 288 7.12E-72 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS05245 04705a48318a7b117e17552b81eb960e 80 SUPERFAMILY SSF52833 4 68 1.97E-13 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS05245 04705a48318a7b117e17552b81eb960e 80 Gene3D G3DSA:3.40.30.10 36 74 7.3E-7 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS05245 04705a48318a7b117e17552b81eb960e 80 Gene3D G3DSA:3.40.30.10 2 35 1.3E-6 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS05245 04705a48318a7b117e17552b81eb960e 80 Pfam PF00462 Glutaredoxin 5 46 9.4E-9 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SHYC_RS00870 e37497dd419cc9dc1c86b83fe0b61c12 459 Pfam PF00324 Amino acid permease 13 446 2.6E-101 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SHYC_RS00870 e37497dd419cc9dc1c86b83fe0b61c12 459 PIRSF PIRSF006060 1 457 1.0E-65 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS00870 e37497dd419cc9dc1c86b83fe0b61c12 459 PANTHER PTHR11785:SF336 3 455 2.0E-171 T 23-04-2016 SHYC_RS00870 e37497dd419cc9dc1c86b83fe0b61c12 459 PANTHER PTHR11785 3 455 2.0E-171 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS07975 bc4534a80be0e2e601d6a1162a385819 854 PANTHER PTHR38454 4 853 1.1E-86 T 23-04-2016 SHYC_RS07975 bc4534a80be0e2e601d6a1162a385819 854 PANTHER PTHR38454:SF1 4 853 1.1E-86 T 23-04-2016 SHYC_RS07975 bc4534a80be0e2e601d6a1162a385819 854 Pfam PF09586 Bacterial membrane protein YfhO 13 833 6.3E-124 T 23-04-2016 IPR018580 Uncharacterised protein family YfhO SHYC_RS02215 fc19967c85fc513d3edd598b376d11c6 462 PANTHER PTHR30330:SF3 1 455 2.1E-188 T 23-04-2016 SHYC_RS02215 fc19967c85fc513d3edd598b376d11c6 462 Pfam PF01235 Sodium:alanine symporter family 54 458 1.8E-135 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS02215 fc19967c85fc513d3edd598b376d11c6 462 PANTHER PTHR30330 1 455 2.1E-188 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS02215 fc19967c85fc513d3edd598b376d11c6 462 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 453 4.9E-149 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS02215 fc19967c85fc513d3edd598b376d11c6 462 PRINTS PR00175 Sodium/alanine symporter signature 307 325 1.0E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS02215 fc19967c85fc513d3edd598b376d11c6 462 PRINTS PR00175 Sodium/alanine symporter signature 422 442 1.0E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS02215 fc19967c85fc513d3edd598b376d11c6 462 PRINTS PR00175 Sodium/alanine symporter signature 212 231 1.0E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS02215 fc19967c85fc513d3edd598b376d11c6 462 PRINTS PR00175 Sodium/alanine symporter signature 363 385 1.0E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS02215 fc19967c85fc513d3edd598b376d11c6 462 PRINTS PR00175 Sodium/alanine symporter signature 91 113 1.0E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS02215 fc19967c85fc513d3edd598b376d11c6 462 PRINTS PR00175 Sodium/alanine symporter signature 184 202 1.0E-54 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS01905 282e9ebc15416a8e6dd8e1fb5d0bcfda 395 PANTHER PTHR34289:SF3 1 395 4.6E-95 T 23-04-2016 SHYC_RS01905 282e9ebc15416a8e6dd8e1fb5d0bcfda 395 Pfam PF05684 Protein of unknown function (DUF819) 17 394 4.9E-99 T 23-04-2016 IPR008537 Protein of unknown function DUF819 SHYC_RS01905 282e9ebc15416a8e6dd8e1fb5d0bcfda 395 PANTHER PTHR34289 1 395 4.6E-95 T 23-04-2016 SHYC_RS05205 0e0aaf052e510143cb52dfe08daf76e4 256 PANTHER PTHR10264:SF78 1 248 2.6E-22 T 23-04-2016 SHYC_RS05205 0e0aaf052e510143cb52dfe08daf76e4 256 PANTHER PTHR10264 1 248 2.6E-22 T 23-04-2016 IPR001972 Stomatin family GO:0016020 SHYC_RS05205 0e0aaf052e510143cb52dfe08daf76e4 256 Pfam PF01145 SPFH domain / Band 7 family 22 205 1.7E-24 T 23-04-2016 IPR001107 Band 7 domain SHYC_RS05205 0e0aaf052e510143cb52dfe08daf76e4 256 SUPERFAMILY SSF117892 54 189 1.7E-11 T 23-04-2016 IPR001107 Band 7 domain SHYC_RS05205 0e0aaf052e510143cb52dfe08daf76e4 256 SMART SM00244 18 184 3.2E-6 T 23-04-2016 IPR001107 Band 7 domain SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 PIRSF PIRSF000094 1 256 2.3E-94 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 Gene3D G3DSA:3.40.50.720 2 253 1.5E-64 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 253 9.3E-82 T 23-04-2016 SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 PANTHER PTHR24322 11 144 2.7E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 PANTHER PTHR24322 160 192 2.7E-56 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 SUPERFAMILY SSF51735 5 254 1.02E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 1.7E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 198 1.7E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.7E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 179 1.7E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 1.7E-11 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 PANTHER PTHR24322:SF317 11 144 2.7E-56 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SHYC_RS09050 59a00575476f73bd9ad29b4c46f49b76 256 PANTHER PTHR24322:SF317 160 192 2.7E-56 T 23-04-2016 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWYG-321|UniPathway: UPA00094 SHYC_RS02925 21b693891b339f12e5c60136acddb389 272 PANTHER PTHR30592:SF1 16 271 8.1E-105 T 23-04-2016 SHYC_RS02925 21b693891b339f12e5c60136acddb389 272 PANTHER PTHR30592 16 271 8.1E-105 T 23-04-2016 SHYC_RS02925 21b693891b339f12e5c60136acddb389 272 Pfam PF02634 FdhD/NarQ family 34 267 5.6E-75 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 SHYC_RS02925 21b693891b339f12e5c60136acddb389 272 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 31 268 6.9E-75 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 SHYC_RS02925 21b693891b339f12e5c60136acddb389 272 Hamap MF_00187 Protein FdhD [fdhD]. 10 268 35.506 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 SHYC_RS02925 21b693891b339f12e5c60136acddb389 272 Gene3D G3DSA:3.10.20.10 36 92 1.9E-20 T 23-04-2016 SHYC_RS02925 21b693891b339f12e5c60136acddb389 272 PIRSF PIRSF015626 4 271 7.3E-74 T 23-04-2016 IPR003786 Protein FdhD GO:0016783 SHYC_RS02925 21b693891b339f12e5c60136acddb389 272 Gene3D G3DSA:3.40.140.10 134 268 6.9E-53 T 23-04-2016 SHYC_RS02925 21b693891b339f12e5c60136acddb389 272 SUPERFAMILY SSF53927 13 267 6.32E-74 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHYC_RS02245 acf3c3d20a6fab7a096cc5bd74c55f48 225 Pfam PF01814 Hemerythrin HHE cation binding domain 84 222 8.6E-18 T 23-04-2016 IPR012312 Haemerythrin-like SHYC_RS02245 acf3c3d20a6fab7a096cc5bd74c55f48 225 Gene3D G3DSA:1.20.120.520 50 224 8.9E-22 T 23-04-2016 SHYC_RS02245 acf3c3d20a6fab7a096cc5bd74c55f48 225 PANTHER PTHR36438 1 224 6.1E-77 T 23-04-2016 SHYC_RS02245 acf3c3d20a6fab7a096cc5bd74c55f48 225 Pfam PF04405 Domain of Unknown function (DUF542) 6 59 2.2E-19 T 23-04-2016 IPR019903 Repair of iron centres family SHYC_RS02245 acf3c3d20a6fab7a096cc5bd74c55f48 225 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 222 1.2E-72 T 23-04-2016 IPR019903 Repair of iron centres family SHYC_RS02245 acf3c3d20a6fab7a096cc5bd74c55f48 225 PANTHER PTHR36438:SF1 1 224 6.1E-77 T 23-04-2016 SHYC_RS02245 acf3c3d20a6fab7a096cc5bd74c55f48 225 SUPERFAMILY SSF140683 1 59 5.36E-5 T 23-04-2016 SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 SMART SM00116 317 365 5.0E-6 T 23-04-2016 IPR000644 CBS domain SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 SMART SM00116 257 305 2.8E-6 T 23-04-2016 IPR000644 CBS domain SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 SUPERFAMILY SSF52540 1 240 6.5E-76 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 Pfam PF00005 ABC transporter 19 163 1.8E-34 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 PANTHER PTHR24220 3 390 5.7E-185 T 23-04-2016 SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 SMART SM00382 27 213 7.0E-16 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 Gene3D G3DSA:3.40.50.300 1 236 1.5E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 12 370 2.4E-139 T 23-04-2016 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 PANTHER PTHR24220:SF350 3 390 5.7E-185 T 23-04-2016 SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 Pfam PF00571 CBS domain 312 362 2.2E-7 T 23-04-2016 IPR000644 CBS domain SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 Pfam PF00571 CBS domain 251 300 2.9E-8 T 23-04-2016 IPR000644 CBS domain SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 SUPERFAMILY SSF54631 249 373 8.33E-25 T 23-04-2016 SHYC_RS00795 7ef470594b5f5e1a5e8729a8547fe09c 393 Gene3D G3DSA:3.10.580.10 249 372 2.3E-24 T 23-04-2016 SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 43 220 2.9E-13 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 PANTHER PTHR10465 29 733 1.2E-14 T 23-04-2016 IPR027094 Mitofusin family GO:0003924 SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 PANTHER PTHR10465:SF5 29 733 1.2E-14 T 23-04-2016 SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 Pfam PF00350 Dynamin family 596 812 7.0E-34 T 23-04-2016 IPR022812 Dynamin superfamily SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 Pfam PF00350 Dynamin family 45 195 5.2E-22 T 23-04-2016 IPR022812 Dynamin superfamily SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 Gene3D G3DSA:3.40.50.300 743 870 6.0E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 Gene3D G3DSA:3.40.50.300 587 636 6.0E-27 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 SUPERFAMILY SSF52540 25 278 5.7E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 SUPERFAMILY SSF52540 727 883 2.11E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 SUPERFAMILY SSF52540 577 675 2.11E-29 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07105 aae73fdb53f0f0bc6aae1fafcc57a2aa 1156 Gene3D G3DSA:3.40.50.300 25 286 1.7E-22 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01420 fb8c5312d4d659e2794b9ff2a0717954 464 PANTHER PTHR23501:SF85 4 463 9.7E-229 T 23-04-2016 SHYC_RS01420 fb8c5312d4d659e2794b9ff2a0717954 464 PANTHER PTHR23501 4 463 9.7E-229 T 23-04-2016 SHYC_RS01420 fb8c5312d4d659e2794b9ff2a0717954 464 SUPERFAMILY SSF103473 249 462 3.66E-53 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS01420 fb8c5312d4d659e2794b9ff2a0717954 464 SUPERFAMILY SSF103473 12 198 3.66E-53 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS01420 fb8c5312d4d659e2794b9ff2a0717954 464 Pfam PF07690 Major Facilitator Superfamily 19 411 2.9E-40 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS01420 fb8c5312d4d659e2794b9ff2a0717954 464 Gene3D G3DSA:1.20.1250.20 14 192 2.1E-24 T 23-04-2016 SHYC_RS01420 fb8c5312d4d659e2794b9ff2a0717954 464 Gene3D G3DSA:1.20.1250.20 265 462 7.9E-18 T 23-04-2016 SHYC_RS03065 79cb3002a86c233a30acbf86800c03d8 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 6.7E-71 T 23-04-2016 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 SHYC_RS03065 79cb3002a86c233a30acbf86800c03d8 207 Gene3D G3DSA:3.40.1370.10 58 206 4.1E-64 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SHYC_RS03065 79cb3002a86c233a30acbf86800c03d8 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 36.523 T 23-04-2016 IPR013005 50S ribosomal protein uL4 SHYC_RS03065 79cb3002a86c233a30acbf86800c03d8 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 1.5E-80 T 23-04-2016 IPR013005 50S ribosomal protein uL4 SHYC_RS03065 79cb3002a86c233a30acbf86800c03d8 207 PANTHER PTHR10746 1 207 8.1E-94 T 23-04-2016 IPR013005 50S ribosomal protein uL4 SHYC_RS03065 79cb3002a86c233a30acbf86800c03d8 207 SUPERFAMILY SSF52166 1 206 4.71E-81 T 23-04-2016 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 SHYC_RS09460 c5ac63e43bea8b4ba518f4c97300cb94 274 PANTHER PTHR30429 1 274 1.1E-134 T 23-04-2016 IPR004872 Lipoprotein NlpA family SHYC_RS09460 c5ac63e43bea8b4ba518f4c97300cb94 274 PIRSF PIRSF002854 1 274 2.7E-94 T 23-04-2016 IPR004872 Lipoprotein NlpA family SHYC_RS09460 c5ac63e43bea8b4ba518f4c97300cb94 274 Pfam PF03180 NLPA lipoprotein 34 273 2.0E-83 T 23-04-2016 IPR004872 Lipoprotein NlpA family SHYC_RS09460 c5ac63e43bea8b4ba518f4c97300cb94 274 SUPERFAMILY SSF53850 33 273 1.97E-74 T 23-04-2016 SHYC_RS09460 c5ac63e43bea8b4ba518f4c97300cb94 274 Gene3D G3DSA:3.40.190.10 163 263 1.6E-5 T 23-04-2016 SHYC_RS09460 c5ac63e43bea8b4ba518f4c97300cb94 274 Gene3D G3DSA:3.40.190.10 31 161 6.0E-52 T 23-04-2016 SHYC_RS09460 c5ac63e43bea8b4ba518f4c97300cb94 274 PANTHER PTHR30429:SF0 1 274 1.1E-134 T 23-04-2016 SHYC_RS08615 2a667cb3dfda728b2238d58a6c815d92 369 Pfam PF00676 Dehydrogenase E1 component 51 337 9.6E-101 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SHYC_RS08615 2a667cb3dfda728b2238d58a6c815d92 369 SUPERFAMILY SSF52518 19 364 2.32E-101 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS08615 2a667cb3dfda728b2238d58a6c815d92 369 PANTHER PTHR11516 9 365 1.8E-146 T 23-04-2016 SHYC_RS08615 2a667cb3dfda728b2238d58a6c815d92 369 Gene3D G3DSA:3.40.50.970 4 361 3.5E-127 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS08615 2a667cb3dfda728b2238d58a6c815d92 369 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 22 362 3.1E-145 T 23-04-2016 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 SHYC_RS10455 532925d2d9b24d8fc0f435fd061fb7d9 285 Pfam PF03099 Biotin/lipoate A/B protein ligase family 77 180 5.2E-11 T 23-04-2016 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 SHYC_RS10455 532925d2d9b24d8fc0f435fd061fb7d9 285 Gene3D G3DSA:3.90.1550.10 8 268 7.4E-70 T 23-04-2016 SHYC_RS10455 532925d2d9b24d8fc0f435fd061fb7d9 285 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 6 275 47.792 T 23-04-2016 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 KEGG: 00073+2.3.1.20|KEGG: 00561+2.3.1.20|MetaCyc: PWY-6987|UniPathway: UPA00538 SHYC_RS10455 532925d2d9b24d8fc0f435fd061fb7d9 285 PANTHER PTHR12561:SF6 13 275 8.3E-84 T 23-04-2016 SHYC_RS10455 532925d2d9b24d8fc0f435fd061fb7d9 285 PANTHER PTHR12561 13 275 8.3E-84 T 23-04-2016 SHYC_RS10455 532925d2d9b24d8fc0f435fd061fb7d9 285 SUPERFAMILY SSF55681 10 271 8.29E-64 T 23-04-2016 SHYC_RS00990 f0356c4bef66a54ff2ea63ce44b42245 467 PANTHER PTHR11328:SF40 24 466 7.2E-149 T 23-04-2016 SHYC_RS00990 f0356c4bef66a54ff2ea63ce44b42245 467 PANTHER PTHR11328 24 466 7.2E-149 T 23-04-2016 SHYC_RS00990 f0356c4bef66a54ff2ea63ce44b42245 467 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 29 462 1.3E-131 T 23-04-2016 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 SHYC_RS00990 f0356c4bef66a54ff2ea63ce44b42245 467 Pfam PF13347 MFS/sugar transport protein 31 451 3.5E-91 T 23-04-2016 SHYC_RS00990 f0356c4bef66a54ff2ea63ce44b42245 467 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 80 107 - T 23-04-2016 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 SHYC_RS00990 f0356c4bef66a54ff2ea63ce44b42245 467 Gene3D G3DSA:1.20.1250.20 246 456 1.2E-13 T 23-04-2016 SHYC_RS00990 f0356c4bef66a54ff2ea63ce44b42245 467 Gene3D G3DSA:1.20.1250.20 36 230 2.5E-6 T 23-04-2016 SHYC_RS00990 f0356c4bef66a54ff2ea63ce44b42245 467 SUPERFAMILY SSF103473 29 455 3.84E-35 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS08220 403e80b29db00c322589626ba1f1f6e4 306 SMART SM00363 16 80 1.2E-13 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS08220 403e80b29db00c322589626ba1f1f6e4 306 PANTHER PTHR11079:SF71 17 305 4.3E-170 T 23-04-2016 SHYC_RS08220 403e80b29db00c322589626ba1f1f6e4 306 Pfam PF00849 RNA pseudouridylate synthase 90 242 2.5E-35 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS08220 403e80b29db00c322589626ba1f1f6e4 306 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 23-04-2016 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS08220 403e80b29db00c322589626ba1f1f6e4 306 PANTHER PTHR11079 17 305 4.3E-170 T 23-04-2016 SHYC_RS08220 403e80b29db00c322589626ba1f1f6e4 306 Pfam PF01479 S4 domain 16 62 2.0E-12 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS08220 403e80b29db00c322589626ba1f1f6e4 306 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 300 9.5E-102 T 23-04-2016 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS08220 403e80b29db00c322589626ba1f1f6e4 306 SUPERFAMILY SSF55120 74 301 1.83E-78 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS08220 403e80b29db00c322589626ba1f1f6e4 306 Gene3D G3DSA:3.10.290.10 17 66 6.0E-15 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS08220 403e80b29db00c322589626ba1f1f6e4 306 SUPERFAMILY SSF55174 16 101 1.33E-13 T 23-04-2016 SHYC_RS06500 0ed137866e4fb24e875e6fb188ba7c3c 134 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 104 3.3E-16 T 23-04-2016 IPR002125 Cytidine and deoxycytidylate deaminases, zinc-binding GO:0008270 SHYC_RS06500 0ed137866e4fb24e875e6fb188ba7c3c 134 PANTHER PTHR11644 8 133 1.1E-53 T 23-04-2016 SHYC_RS06500 0ed137866e4fb24e875e6fb188ba7c3c 134 Gene3D G3DSA:3.40.140.10 5 133 1.1E-47 T 23-04-2016 SHYC_RS06500 0ed137866e4fb24e875e6fb188ba7c3c 134 SUPERFAMILY SSF53927 5 133 1.15E-43 T 23-04-2016 IPR016193 Cytidine deaminase-like GO:0003824 SHYC_RS06500 0ed137866e4fb24e875e6fb188ba7c3c 134 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 54 96 - T 23-04-2016 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 SHYC_RS06500 0ed137866e4fb24e875e6fb188ba7c3c 134 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 6 133 2.7E-50 T 23-04-2016 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 SHYC_RS03475 807128c6e9ea66270d05d4a9cc8f6851 312 Pfam PF01238 Phosphomannose isomerase type I 5 195 1.0E-31 T 23-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SHYC_RS03475 807128c6e9ea66270d05d4a9cc8f6851 312 PIRSF PIRSF036894 1 312 6.7E-125 T 23-04-2016 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SHYC_RS03475 807128c6e9ea66270d05d4a9cc8f6851 312 PANTHER PTHR18964 1 254 2.2E-101 T 23-04-2016 SHYC_RS03475 807128c6e9ea66270d05d4a9cc8f6851 312 PANTHER PTHR18964:SF114 1 254 2.2E-101 T 23-04-2016 SHYC_RS03475 807128c6e9ea66270d05d4a9cc8f6851 312 Gene3D G3DSA:2.60.120.10 2 214 4.9E-74 T 23-04-2016 IPR014710 RmlC-like jelly roll fold SHYC_RS03475 807128c6e9ea66270d05d4a9cc8f6851 312 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 102 310 4.0E-37 T 23-04-2016 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 SHYC_RS03475 807128c6e9ea66270d05d4a9cc8f6851 312 SUPERFAMILY SSF51182 2 312 6.68E-100 T 23-04-2016 IPR011051 RmlC-like cupin domain SHYC_RS03475 807128c6e9ea66270d05d4a9cc8f6851 312 Gene3D G3DSA:2.60.120.10 226 312 1.3E-26 T 23-04-2016 IPR014710 RmlC-like jelly roll fold SHYC_RS05280 1c34237e1df0c0d2572a33f6b0d78be6 111 Gene3D G3DSA:1.10.3860.10 1 103 5.9E-36 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS05280 1c34237e1df0c0d2572a33f6b0d78be6 111 Pfam PF00375 Sodium:dicarboxylate symporter family 1 97 4.1E-33 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS05280 1c34237e1df0c0d2572a33f6b0d78be6 111 SUPERFAMILY SSF118215 1 98 2.09E-31 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS05280 1c34237e1df0c0d2572a33f6b0d78be6 111 PANTHER PTHR11958 1 105 3.7E-43 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS07960 3492e859224e0d924090ba73c36c7c97 293 PIRSF PIRSF006230 1 283 9.1E-97 T 23-04-2016 IPR016478 GTPase, MTG1 SHYC_RS07960 3492e859224e0d924090ba73c36c7c97 293 Pfam PF01926 50S ribosome-binding GTPase 123 214 1.8E-17 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS07960 3492e859224e0d924090ba73c36c7c97 293 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 279 1.3E-110 T 23-04-2016 IPR019991 GTP-binding protein, ribosome biogenesis SHYC_RS07960 3492e859224e0d924090ba73c36c7c97 293 SUPERFAMILY SSF52540 9 255 1.31E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07960 3492e859224e0d924090ba73c36c7c97 293 Gene3D G3DSA:3.40.50.300 15 177 1.6E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07960 3492e859224e0d924090ba73c36c7c97 293 Gene3D G3DSA:1.10.1580.10 180 273 1.8E-25 T 23-04-2016 IPR023179 GTP-binding protein, orthogonal bundle domain SHYC_RS07960 3492e859224e0d924090ba73c36c7c97 293 PANTHER PTHR11089 3 279 3.9E-75 T 23-04-2016 SHYC_RS03550 43ae99f75d3eeba0cce58877091cc521 286 PANTHER PTHR23091 9 167 2.8E-12 T 23-04-2016 SHYC_RS03550 43ae99f75d3eeba0cce58877091cc521 286 Gene3D G3DSA:3.40.630.30 193 277 9.6E-6 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03550 43ae99f75d3eeba0cce58877091cc521 286 SUPERFAMILY SSF55729 192 279 1.28E-6 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03550 43ae99f75d3eeba0cce58877091cc521 286 Pfam PF00583 Acetyltransferase (GNAT) family 60 144 1.6E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS03550 43ae99f75d3eeba0cce58877091cc521 286 Gene3D G3DSA:3.40.630.30 4 162 1.4E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03550 43ae99f75d3eeba0cce58877091cc521 286 SUPERFAMILY SSF55729 8 152 1.26E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03035 69b6524df0fbcc7c690d2c09c0d250f6 304 Pfam PF03547 Membrane transport protein 5 140 3.5E-7 T 23-04-2016 IPR004776 Auxin efflux carrier GO:0016021|GO:0055085 SHYC_RS07430 d3e6776d2bb9e9649f9b349440582907 544 PANTHER PTHR30047 14 544 3.2E-237 T 23-04-2016 SHYC_RS07430 d3e6776d2bb9e9649f9b349440582907 544 ProSitePatterns PS01303 BCCT family of transporters signature. 318 327 - T 23-04-2016 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 SHYC_RS07430 d3e6776d2bb9e9649f9b349440582907 544 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 54 502 3.8E-157 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SHYC_RS07430 d3e6776d2bb9e9649f9b349440582907 544 PANTHER PTHR30047:SF2 14 544 3.2E-237 T 23-04-2016 SHYC_RS07430 d3e6776d2bb9e9649f9b349440582907 544 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 501 3.4E-182 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 4.0E-34 T 23-04-2016 IPR019984 Ribosomal protein S17, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 2.0E-34 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 83 23.774 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 PANTHER PTHR10744 1 86 3.7E-38 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 Pfam PF00366 Ribosomal protein S17 12 79 1.6E-31 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 SUPERFAMILY SSF50249 7 83 6.0E-31 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 2.3E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 2.3E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 2.3E-11 T 23-04-2016 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 23-04-2016 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03105 09a34cc58f94d871c1803a7747ffc661 87 Gene3D G3DSA:2.40.50.140 7 83 1.8E-33 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS02855 f8b96d455c934623e4aaabd95dd1ae9f 241 PANTHER PTHR33308:SF2 138 241 2.5E-30 T 23-04-2016 SHYC_RS02855 f8b96d455c934623e4aaabd95dd1ae9f 241 Pfam PF05257 CHAP domain 140 216 1.1E-14 T 23-04-2016 IPR007921 CHAP domain SHYC_RS02855 f8b96d455c934623e4aaabd95dd1ae9f 241 PANTHER PTHR33308 138 241 2.5E-30 T 23-04-2016 SHYC_RS02855 f8b96d455c934623e4aaabd95dd1ae9f 241 SUPERFAMILY SSF54001 115 230 5.59E-21 T 23-04-2016 SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 SUPERFAMILY SSF52096 11 191 1.21E-74 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 23-04-2016 IPR018215 ClpP, Ser active site SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.067 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 Pfam PF00574 Clp protease 13 192 9.6E-89 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 4.2E-55 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 4.2E-55 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 4.2E-55 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 4.2E-55 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 4.2E-55 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 23-04-2016 IPR033135 ClpP, histidine active site SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 Gene3D G3DSA:3.90.226.10 3 191 1.2E-91 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 2.0E-104 T 23-04-2016 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 SHYC_RS09635 0b8a9cda530c228098396557c0806cf8 193 PANTHER PTHR10381 3 190 6.8E-131 T 23-04-2016 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA SHYC_RS02190 b99d5648c2c513048612c4a7de06e07f 423 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHYC_RS02190 b99d5648c2c513048612c4a7de06e07f 423 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 16 27 - T 23-04-2016 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site SHYC_RS02190 b99d5648c2c513048612c4a7de06e07f 423 Gene3D G3DSA:1.10.1060.10 9 96 1.5E-16 T 23-04-2016 SHYC_RS02190 b99d5648c2c513048612c4a7de06e07f 423 SUPERFAMILY SSF46548 13 86 5.75E-18 T 23-04-2016 IPR009051 Alpha-helical ferredoxin GO:0051536 SHYC_RS02190 b99d5648c2c513048612c4a7de06e07f 423 PANTHER PTHR32479 5 417 2.5E-105 T 23-04-2016 SHYC_RS02190 b99d5648c2c513048612c4a7de06e07f 423 PANTHER PTHR32479:SF2 5 417 2.5E-105 T 23-04-2016 SHYC_RS02190 b99d5648c2c513048612c4a7de06e07f 423 Pfam PF13534 4Fe-4S dicluster domain 16 80 6.9E-14 T 23-04-2016 SHYC_RS02190 b99d5648c2c513048612c4a7de06e07f 423 Pfam PF02754 Cysteine-rich domain 310 394 9.8E-13 T 23-04-2016 IPR004017 Cysteine-rich domain SHYC_RS02190 b99d5648c2c513048612c4a7de06e07f 423 Pfam PF02754 Cysteine-rich domain 182 264 1.2E-12 T 23-04-2016 IPR004017 Cysteine-rich domain SHYC_RS02190 b99d5648c2c513048612c4a7de06e07f 423 PIRSF PIRSF000139 2 422 6.8E-114 T 23-04-2016 IPR012257 Glycolate oxidase, iron-sulphur subunit SHYC_RS00695 6afd16f1834488d2c29e70b785ac6b55 246 PANTHER PTHR10794:SF37 80 192 4.5E-14 T 23-04-2016 SHYC_RS00695 6afd16f1834488d2c29e70b785ac6b55 246 Pfam PF02517 CAAX protease self-immunity 99 195 7.0E-18 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SHYC_RS00695 6afd16f1834488d2c29e70b785ac6b55 246 PANTHER PTHR10794 80 192 4.5E-14 T 23-04-2016 SHYC_RS03545 8a6195979511a8426487b6703199458f 532 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 56 502 5.8E-146 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SHYC_RS03545 8a6195979511a8426487b6703199458f 532 PANTHER PTHR30047 18 532 1.0E-187 T 23-04-2016 SHYC_RS03545 8a6195979511a8426487b6703199458f 532 PANTHER PTHR30047:SF2 18 532 1.0E-187 T 23-04-2016 SHYC_RS03545 8a6195979511a8426487b6703199458f 532 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 18 503 1.6E-182 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 213 252 5.2E-15 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 SUPERFAMILY SSF52343 92 253 1.57E-36 T 23-04-2016 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 PIRSF PIRSF006816 2 254 2.9E-74 T 23-04-2016 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 UniPathway: UPA00070 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 PRINTS PR00409 Phthalate dioxygenase reductase family signature 184 192 8.9E-5 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 PRINTS PR00409 Phthalate dioxygenase reductase family signature 107 126 8.9E-5 T 23-04-2016 IPR000951 Phthalate dioxygenase reductase GO:0016491 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 Pfam PF00175 Oxidoreductase NAD-binding domain 108 197 3.9E-6 T 23-04-2016 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 Gene3D G3DSA:2.10.240.10 213 253 1.5E-17 T 23-04-2016 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain UniPathway: UPA00070 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 PANTHER PTHR19370:SF68 3 242 6.1E-55 T 23-04-2016 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 Gene3D G3DSA:2.40.30.10 3 95 4.1E-27 T 23-04-2016 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 SUPERFAMILY SSF63380 4 97 1.13E-19 T 23-04-2016 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 1 254 37.495 T 23-04-2016 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit UniPathway: UPA00070 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 Gene3D G3DSA:3.40.50.80 101 211 7.7E-38 T 23-04-2016 SHYC_RS08185 9fa628656decf8cc24f0b6599c9ac88f 254 PANTHER PTHR19370 3 242 6.1E-55 T 23-04-2016 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 Pfam PF06628 Catalase-related immune-responsive 422 484 1.8E-23 T 23-04-2016 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 Gene3D G3DSA:2.40.180.10 5 360 3.6E-172 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 SMART SM01060 10 399 1.1E-268 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 PRINTS PR00067 Catalase signature 86 104 5.0E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 PRINTS PR00067 Catalase signature 291 318 5.0E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 PRINTS PR00067 Catalase signature 126 144 5.0E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 PRINTS PR00067 Catalase signature 107 124 5.0E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 PRINTS PR00067 Catalase signature 323 349 5.0E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 PRINTS PR00067 Catalase signature 23 46 5.0E-68 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 Pfam PF00199 Catalase 13 395 5.0E-183 T 23-04-2016 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 PANTHER PTHR11465 5 488 3.2E-282 T 23-04-2016 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 SUPERFAMILY SSF56634 4 486 1.57E-200 T 23-04-2016 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 336 344 - T 23-04-2016 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 ProSitePatterns PS00438 Catalase proximal active site signature. 46 62 - T 23-04-2016 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS07505 078079f6ceee8cf303185f6a7dec12dd 498 PIRSF PIRSF038928 2 489 1.3E-208 T 23-04-2016 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 SHYC_RS03830 ae0bbeee61778115a3db8fbe5f9468d6 117 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 2 108 1.6E-33 T 23-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 SHYC_RS03830 ae0bbeee61778115a3db8fbe5f9468d6 117 SUPERFAMILY SSF50118 1 111 7.19E-40 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor SHYC_RS03830 ae0bbeee61778115a3db8fbe5f9468d6 117 PANTHER PTHR33988 1 113 3.3E-54 T 23-04-2016 SHYC_RS03830 ae0bbeee61778115a3db8fbe5f9468d6 117 PIRSF PIRSF033490 1 111 1.8E-37 T 23-04-2016 IPR003477 mRNA interferase PemK-like protein GO:0003677 SHYC_RS03830 ae0bbeee61778115a3db8fbe5f9468d6 117 Gene3D G3DSA:2.30.30.110 1 111 6.9E-46 T 23-04-2016 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor SHYC_RS03830 ae0bbeee61778115a3db8fbe5f9468d6 117 PANTHER PTHR33988:SF2 1 113 3.3E-54 T 23-04-2016 SHYC_RS01090 dc0e0e690f1f84e041c852eaf6d8ac56 296 Gene3D G3DSA:3.10.310.10 1 125 7.7E-37 T 23-04-2016 SHYC_RS01090 dc0e0e690f1f84e041c852eaf6d8ac56 296 SUPERFAMILY SSF54506 4 290 4.54E-56 T 23-04-2016 SHYC_RS01090 dc0e0e690f1f84e041c852eaf6d8ac56 296 PANTHER PTHR13774 1 296 1.8E-86 T 23-04-2016 SHYC_RS01090 dc0e0e690f1f84e041c852eaf6d8ac56 296 PIRSF PIRSF016184 1 296 1.7E-74 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SHYC_RS01090 dc0e0e690f1f84e041c852eaf6d8ac56 296 PANTHER PTHR13774:SF21 1 296 1.8E-86 T 23-04-2016 SHYC_RS01090 dc0e0e690f1f84e041c852eaf6d8ac56 296 Pfam PF02567 Phenazine biosynthesis-like protein 9 288 5.0E-64 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SHYC_RS01090 dc0e0e690f1f84e041c852eaf6d8ac56 296 Gene3D G3DSA:3.10.310.10 126 278 1.6E-35 T 23-04-2016 SHYC_RS01090 dc0e0e690f1f84e041c852eaf6d8ac56 296 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 288 7.0E-80 T 23-04-2016 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 KEGG: 00520+5.1.-.-|KEGG: 00960+5.1.-.- SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 PANTHER PTHR22773:SF46 1 599 7.3E-197 T 23-04-2016 SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 Pfam PF00361 Proton-conducting membrane transporter 128 433 4.3E-69 T 23-04-2016 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: REACT_6305 SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 Pfam PF13244 Domain of unknown function (DUF4040) 630 693 2.4E-19 T 23-04-2016 IPR025383 Domain of unknown function DUF4040 SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 61 115 6.2E-11 T 23-04-2016 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 308 320 1.7E-41 T 23-04-2016 SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 76 101 1.7E-41 T 23-04-2016 SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 218 239 1.7E-41 T 23-04-2016 SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 152 173 1.7E-41 T 23-04-2016 SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 105 125 1.7E-41 T 23-04-2016 SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 240 266 1.7E-41 T 23-04-2016 SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 435 454 1.7E-41 T 23-04-2016 SHYC_RS10325 358108695bf3a4fb890cea2fb8ca6a60 794 PANTHER PTHR22773 1 599 7.3E-197 T 23-04-2016 SHYC_RS08010 7fd89a426eed564e354ccadbf2de5c52 110 Hamap MF_00245 UPF0122 protein . 6 103 21.169 T 23-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like SHYC_RS08010 7fd89a426eed564e354ccadbf2de5c52 110 Gene3D G3DSA:1.10.10.10 2 108 3.6E-38 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS08010 7fd89a426eed564e354ccadbf2de5c52 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 8 104 5.7E-38 T 23-04-2016 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like SHYC_RS08010 7fd89a426eed564e354ccadbf2de5c52 110 SUPERFAMILY SSF88659 6 108 3.18E-31 T 23-04-2016 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 SHYC_RS08010 7fd89a426eed564e354ccadbf2de5c52 110 PANTHER PTHR40083 5 110 9.7E-37 T 23-04-2016 SHYC_RS11735 914c6f89fbadc420f45d4c2feb03eef4 195 PANTHER PTHR10655:SF23 13 192 2.0E-51 T 23-04-2016 SHYC_RS11735 914c6f89fbadc420f45d4c2feb03eef4 195 Gene3D G3DSA:3.40.50.1820 2 194 3.9E-56 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS11735 914c6f89fbadc420f45d4c2feb03eef4 195 PANTHER PTHR10655 13 192 2.0E-51 T 23-04-2016 SHYC_RS11735 914c6f89fbadc420f45d4c2feb03eef4 195 Pfam PF02230 Phospholipase/Carboxylesterase 3 193 1.5E-11 T 23-04-2016 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 SHYC_RS11735 914c6f89fbadc420f45d4c2feb03eef4 195 SUPERFAMILY SSF53474 3 193 1.32E-43 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS06410 e17277bf6ed85e17263ff9ea80f91813 325 SUPERFAMILY SSF48019 206 325 2.55E-21 T 23-04-2016 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: REACT_152|Reactome: REACT_1538|Reactome: REACT_216|Reactome: REACT_22172|Reactome: REACT_383 SHYC_RS06410 e17277bf6ed85e17263ff9ea80f91813 325 PANTHER PTHR34388 4 325 1.1E-63 T 23-04-2016 SHYC_RS06410 e17277bf6ed85e17263ff9ea80f91813 325 Pfam PF06144 DNA polymerase III, delta subunit 6 182 9.0E-41 T 23-04-2016 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 SHYC_RS06410 e17277bf6ed85e17263ff9ea80f91813 325 Gene3D G3DSA:3.40.50.300 4 128 1.4E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06410 e17277bf6ed85e17263ff9ea80f91813 325 SUPERFAMILY SSF52540 4 203 1.49E-13 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06410 e17277bf6ed85e17263ff9ea80f91813 325 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 4 325 3.2E-78 T 23-04-2016 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 SHYC_RS06410 e17277bf6ed85e17263ff9ea80f91813 325 Gene3D G3DSA:1.10.8.60 139 224 8.6E-15 T 23-04-2016 SHYC_RS06035 1be56363e20413b396fb3f19a4261a92 203 SUPERFAMILY SSF55811 65 188 8.12E-13 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHYC_RS06035 1be56363e20413b396fb3f19a4261a92 203 Pfam PF00293 NUDIX domain 65 200 1.9E-6 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SHYC_RS06035 1be56363e20413b396fb3f19a4261a92 203 Gene3D G3DSA:3.90.79.10 63 201 9.5E-13 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHYC_RS04215 8d21b5334f35a6d7f65ec429156a5e81 514 PANTHER PTHR11819:SF148 15 509 8.2E-200 T 23-04-2016 SHYC_RS04215 8d21b5334f35a6d7f65ec429156a5e81 514 PANTHER PTHR11819 15 509 8.2E-200 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS04215 8d21b5334f35a6d7f65ec429156a5e81 514 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 17 508 2.0E-217 T 23-04-2016 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 SHYC_RS04215 8d21b5334f35a6d7f65ec429156a5e81 514 Pfam PF00474 Sodium:solute symporter family 47 448 3.0E-99 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS04215 8d21b5334f35a6d7f65ec429156a5e81 514 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 47 448 1.1E-87 T 23-04-2016 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS07970 71703586f7f62c05beacae55856738c9 867 Pfam PF09586 Bacterial membrane protein YfhO 16 841 6.2E-135 T 23-04-2016 IPR018580 Uncharacterised protein family YfhO SHYC_RS07970 71703586f7f62c05beacae55856738c9 867 PANTHER PTHR38454:SF1 1 862 3.4E-62 T 23-04-2016 SHYC_RS07970 71703586f7f62c05beacae55856738c9 867 PANTHER PTHR38454 1 862 3.4E-62 T 23-04-2016 SHYC_RS08115 1f214512897b73f8c9b288ba23c1f270 364 PANTHER PTHR30544:SF5 1 364 6.1E-176 T 23-04-2016 SHYC_RS08115 1f214512897b73f8c9b288ba23c1f270 364 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 17 364 3.5E-155 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS08115 1f214512897b73f8c9b288ba23c1f270 364 Gene3D G3DSA:3.20.20.70 111 343 1.8E-15 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS08115 1f214512897b73f8c9b288ba23c1f270 364 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 18 360 72.342 T 23-04-2016 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS08115 1f214512897b73f8c9b288ba23c1f270 364 Pfam PF13394 4Fe-4S single cluster domain 126 232 9.9E-7 T 23-04-2016 SHYC_RS08115 1f214512897b73f8c9b288ba23c1f270 364 Pfam PF04055 Radical SAM superfamily 121 290 3.4E-18 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS08115 1f214512897b73f8c9b288ba23c1f270 364 PANTHER PTHR30544 1 364 6.1E-176 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS08115 1f214512897b73f8c9b288ba23c1f270 364 SUPERFAMILY SSF102114 113 333 2.22E-13 T 23-04-2016 SHYC_RS08115 1f214512897b73f8c9b288ba23c1f270 364 PIRSF PIRSF006004 9 364 1.5E-137 T 23-04-2016 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 SHYC_RS00760 2574b127b97e03f3323565fbced6cef0 474 Pfam PF13460 NAD(P)H-binding 8 118 1.7E-13 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS00760 2574b127b97e03f3323565fbced6cef0 474 PANTHER PTHR10366:SF401 260 299 1.1E-53 T 23-04-2016 SHYC_RS00760 2574b127b97e03f3323565fbced6cef0 474 PANTHER PTHR10366:SF401 3 239 1.1E-53 T 23-04-2016 SHYC_RS00760 2574b127b97e03f3323565fbced6cef0 474 SUPERFAMILY SSF51735 1 273 2.73E-41 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS00760 2574b127b97e03f3323565fbced6cef0 474 Gene3D G3DSA:3.40.50.720 1 223 5.5E-33 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS00760 2574b127b97e03f3323565fbced6cef0 474 PANTHER PTHR10366 260 299 1.1E-53 T 23-04-2016 SHYC_RS00760 2574b127b97e03f3323565fbced6cef0 474 PANTHER PTHR10366 3 239 1.1E-53 T 23-04-2016 SHYC_RS09915 a9b9beba67f092f0ad36b6a291d608d2 222 Pfam PF06508 Queuosine biosynthesis protein QueC 9 214 6.9E-84 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SHYC_RS09915 a9b9beba67f092f0ad36b6a291d608d2 222 Gene3D G3DSA:3.40.50.620 7 214 7.2E-79 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS09915 a9b9beba67f092f0ad36b6a291d608d2 222 PANTHER PTHR11587 6 214 3.0E-98 T 23-04-2016 SHYC_RS09915 a9b9beba67f092f0ad36b6a291d608d2 222 PANTHER PTHR11587:SF3 6 214 3.0E-98 T 23-04-2016 SHYC_RS09915 a9b9beba67f092f0ad36b6a291d608d2 222 PIRSF PIRSF006293 6 222 8.3E-78 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SHYC_RS09915 a9b9beba67f092f0ad36b6a291d608d2 222 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 8 220 49.333 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SHYC_RS09915 a9b9beba67f092f0ad36b6a291d608d2 222 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 10 207 1.0E-79 T 23-04-2016 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703|UniPathway: UPA00391 SHYC_RS09915 a9b9beba67f092f0ad36b6a291d608d2 222 SUPERFAMILY SSF52402 7 215 3.09E-65 T 23-04-2016 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 23-04-2016 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 Pfam PF00591 Glycosyl transferase family, a/b domain 77 305 3.6E-48 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 SMART SM00941 345 418 2.9E-34 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 418 7.7E-182 T 23-04-2016 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|UniPathway: UPA00578 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 Gene3D G3DSA:1.20.970.10 1 67 4.4E-33 T 23-04-2016 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 Gene3D G3DSA:3.90.1170.30 335 421 4.5E-34 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 SUPERFAMILY SSF47648 1 69 1.7E-23 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 SUPERFAMILY SSF54680 332 431 4.58E-30 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 PANTHER PTHR10515 1 433 3.4E-229 T 23-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 PIRSF PIRSF000478 1 432 8.9E-170 T 23-04-2016 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 PANTHER PTHR10515:SF0 1 433 3.4E-229 T 23-04-2016 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 SUPERFAMILY SSF52418 69 329 3.79E-93 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 Gene3D G3DSA:3.40.1030.10 70 334 2.2E-116 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 6.5E-28 T 23-04-2016 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 SHYC_RS03505 f1e243abce846eb2bd0261f0079898b1 433 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 66 1.0E-22 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SHYC_RS05865 2479f910b550ff7fc215eaf0fe61386b 328 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 55 272 2.1E-73 T 23-04-2016 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 SHYC_RS05865 2479f910b550ff7fc215eaf0fe61386b 328 Gene3D G3DSA:3.90.226.10 49 164 2.0E-56 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS05865 2479f910b550ff7fc215eaf0fe61386b 328 Gene3D G3DSA:3.90.226.10 202 278 2.0E-56 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS05865 2479f910b550ff7fc215eaf0fe61386b 328 Gene3D G3DSA:3.90.226.10 14 15 2.0E-56 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS05865 2479f910b550ff7fc215eaf0fe61386b 328 PANTHER PTHR33209 55 281 8.3E-80 T 23-04-2016 SHYC_RS05865 2479f910b550ff7fc215eaf0fe61386b 328 Pfam PF01343 Peptidase family S49 125 275 8.7E-52 T 23-04-2016 IPR002142 Peptidase S49 GO:0006508|GO:0008233 SHYC_RS05865 2479f910b550ff7fc215eaf0fe61386b 328 SUPERFAMILY SSF52096 51 172 5.97E-40 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS05865 2479f910b550ff7fc215eaf0fe61386b 328 SUPERFAMILY SSF52096 201 261 5.97E-40 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS01270 f87584fa1477021d83d58f9344cd16dc 398 PANTHER PTHR10590 3 398 4.5E-212 T 23-04-2016 IPR008276 Concentrative nucleoside transporter GO:0005337|GO:0016020|GO:1901642 Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS01270 f87584fa1477021d83d58f9344cd16dc 398 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 81 2.3E-16 T 23-04-2016 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS01270 f87584fa1477021d83d58f9344cd16dc 398 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 396 2.8E-58 T 23-04-2016 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS01270 f87584fa1477021d83d58f9344cd16dc 398 PANTHER PTHR10590:SF13 3 398 4.5E-212 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 SUPERFAMILY SSF103473 235 447 3.79E-44 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 SUPERFAMILY SSF103473 8 188 3.79E-44 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PANTHER PTHR23501:SF5 8 452 1.8E-90 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 Pfam PF07690 Major Facilitator Superfamily 15 395 6.9E-32 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PANTHER PTHR23501 8 452 1.8E-90 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 254 279 2.1E-32 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 160 184 2.1E-32 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 2.1E-32 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 386 405 2.1E-32 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 289 313 2.1E-32 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 199 217 2.1E-32 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 2.1E-32 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 220 238 2.1E-32 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 73 95 2.1E-32 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 Gene3D G3DSA:1.20.1250.20 8 192 1.1E-20 T 23-04-2016 SHYC_RS00720 e21a30f27b4f56cee5d320395a588492 453 Gene3D G3DSA:1.20.1250.20 251 449 9.5E-16 T 23-04-2016 SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 Gene3D G3DSA:3.20.20.80 3 477 4.8E-149 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 PANTHER PTHR10353:SF35 3 480 1.4E-226 T 23-04-2016 SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 PANTHER PTHR10353 3 480 1.4E-226 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 8.5E-19 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 8.5E-19 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 441 453 8.5E-19 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 373 381 8.5E-19 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 8.5E-19 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 373 381 - T 23-04-2016 IPR018120 Glycoside hydrolase family 1, active site SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 SUPERFAMILY SSF51445 2 472 4.88E-161 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 23-04-2016 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site SHYC_RS00675 6e344aebf553d818af691be489eab62e 480 Pfam PF00232 Glycosyl hydrolase family 1 3 476 3.8E-135 T 23-04-2016 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 SHYC_RS09400 470ecc88ab9d41a5d2ce0405edcb578b 121 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 8.7E-33 T 23-04-2016 IPR009370 Protein of unknown function DUF1027 SHYC_RS09400 470ecc88ab9d41a5d2ce0405edcb578b 121 PANTHER PTHR41319:SF1 1 121 6.2E-43 T 23-04-2016 SHYC_RS09400 470ecc88ab9d41a5d2ce0405edcb578b 121 PANTHER PTHR41319 1 121 6.2E-43 T 23-04-2016 SHYC_RS09400 470ecc88ab9d41a5d2ce0405edcb578b 121 PIRSF PIRSF012565 1 118 1.5E-45 T 23-04-2016 IPR009370 Protein of unknown function DUF1027 SHYC_RS01260 2466668135d5387e050aea3867e3e980 94 PANTHER PTHR33843:SF2 1 94 3.9E-35 T 23-04-2016 SHYC_RS01260 2466668135d5387e050aea3867e3e980 94 Gene3D G3DSA:3.40.50.270 2 89 3.7E-13 T 23-04-2016 SHYC_RS01260 2466668135d5387e050aea3867e3e980 94 SUPERFAMILY SSF52794 1 90 2.09E-18 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHYC_RS01260 2466668135d5387e050aea3867e3e980 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 84 8.8E-14 T 23-04-2016 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 SHYC_RS01260 2466668135d5387e050aea3867e3e980 94 PANTHER PTHR33843 1 94 3.9E-35 T 23-04-2016 SHYC_RS01645 67d41dbdfbf3061c30b3505ffad5ea0c 204 Pfam PF01634 ATP phosphoribosyltransferase 53 197 3.6E-45 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SHYC_RS01645 67d41dbdfbf3061c30b3505ffad5ea0c 204 Gene3D G3DSA:3.40.190.10 1 105 3.2E-28 T 23-04-2016 SHYC_RS01645 67d41dbdfbf3061c30b3505ffad5ea0c 204 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 1 202 45.369 T 23-04-2016 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SHYC_RS01645 67d41dbdfbf3061c30b3505ffad5ea0c 204 Gene3D G3DSA:3.40.190.10 106 171 1.1E-25 T 23-04-2016 SHYC_RS01645 67d41dbdfbf3061c30b3505ffad5ea0c 204 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 2 177 2.4E-53 T 23-04-2016 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SHYC_RS01645 67d41dbdfbf3061c30b3505ffad5ea0c 204 PANTHER PTHR21403 1 197 3.7E-72 T 23-04-2016 IPR001348 ATP phosphoribosyltransferase HisG GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17|UniPathway: UPA00031 SHYC_RS01645 67d41dbdfbf3061c30b3505ffad5ea0c 204 PANTHER PTHR21403:SF3 1 197 3.7E-72 T 23-04-2016 SHYC_RS01645 67d41dbdfbf3061c30b3505ffad5ea0c 204 SUPERFAMILY SSF53850 1 197 4.16E-53 T 23-04-2016 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 PANTHER PTHR13847:SF180 4 364 6.4E-75 T 23-04-2016 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 PANTHER PTHR13847 4 364 6.4E-75 T 23-04-2016 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 SUPERFAMILY SSF51905 2 222 6.91E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 SUPERFAMILY SSF51905 310 364 6.91E-42 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 Gene3D G3DSA:3.50.50.60 310 364 1.1E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 Gene3D G3DSA:3.50.50.60 1 81 1.1E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 Gene3D G3DSA:3.50.50.60 140 211 1.1E-51 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 Gene3D G3DSA:3.30.9.10 212 308 3.2E-15 T 23-04-2016 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 Pfam PF01266 FAD dependent oxidoreductase 3 345 1.1E-58 T 23-04-2016 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 SUPERFAMILY SSF54373 223 309 3.14E-16 T 23-04-2016 SHYC_RS11525 2c52ab2e1c6c4f35fe4312ff7658954a 368 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 4 350 2.4E-82 T 23-04-2016 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 UniPathway: UPA00060 SHYC_RS03185 859976c6eb4614a4e585cf212e737851 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 2.2E-59 T 23-04-2016 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03185 859976c6eb4614a4e585cf212e737851 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 23-04-2016 IPR018102 Ribosomal S11, conserved site SHYC_RS03185 859976c6eb4614a4e585cf212e737851 129 Pfam PF00411 Ribosomal protein S11 19 128 8.6E-51 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03185 859976c6eb4614a4e585cf212e737851 129 PIRSF PIRSF002131 1 129 1.7E-53 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03185 859976c6eb4614a4e585cf212e737851 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 34.288 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03185 859976c6eb4614a4e585cf212e737851 129 Gene3D G3DSA:3.30.420.80 6 129 6.7E-56 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03185 859976c6eb4614a4e585cf212e737851 129 PANTHER PTHR11759 10 129 3.3E-71 T 23-04-2016 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03185 859976c6eb4614a4e585cf212e737851 129 SUPERFAMILY SSF53137 14 129 2.81E-49 T 23-04-2016 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Gene3D G3DSA:3.30.1360.40 233 329 9.7E-35 T 23-04-2016 IPR024946 Arginine repressor C-terminal-like domain SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 PANTHER PTHR10169 2 740 0.0 T 23-04-2016 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 705 753 7.5E-4 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 659 696 1.1E-5 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 550 597 3.9E-5 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 605 649 1.4E-4 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 532 0.31 T 23-04-2016 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Gene3D G3DSA:3.90.199.10 27 232 4.4E-117 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Gene3D G3DSA:3.90.199.10 330 395 4.4E-117 T 23-04-2016 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 SUPERFAMILY SSF101904 497 800 2.49E-79 T 23-04-2016 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 SMART SM00434 8 461 2.6E-260 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 SUPERFAMILY SSF56719 28 481 7.06E-167 T 23-04-2016 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 PANTHER PTHR10169:SF47 2 740 0.0 T 23-04-2016 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 4 803 32.646 T 23-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 5 745 0.0 T 23-04-2016 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 468 1.2E-151 T 23-04-2016 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 SHYC_RS07400 37cae90ea2c7198f15101b1254b8c381 803 Gene3D G3DSA:2.120.10.90 495 800 8.5E-72 T 23-04-2016 SHYC_RS09310 3a3dbebde6af68fc18ba19252405535a 374 SUPERFAMILY SSF88713 83 140 3.89E-13 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHYC_RS09310 3a3dbebde6af68fc18ba19252405535a 374 SUPERFAMILY SSF88713 178 312 3.89E-13 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHYC_RS09310 3a3dbebde6af68fc18ba19252405535a 374 Pfam PF01522 Polysaccharide deacetylase 236 298 1.5E-5 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SHYC_RS09310 3a3dbebde6af68fc18ba19252405535a 374 Gene3D G3DSA:3.20.20.370 236 348 1.4E-7 T 23-04-2016 IPR002509 NodB homology domain GO:0005975|GO:0016810 SHYC_RS07575 cda5337b0ef0455e2029b30cd4072978 251 PANTHER PTHR24421 17 246 5.2E-43 T 23-04-2016 SHYC_RS07575 cda5337b0ef0455e2029b30cd4072978 251 Gene3D G3DSA:3.30.565.10 131 243 1.6E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07575 cda5337b0ef0455e2029b30cd4072978 251 SUPERFAMILY SSF55874 140 241 7.33E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS07575 cda5337b0ef0455e2029b30cd4072978 251 Pfam PF07730 Histidine kinase 63 125 1.1E-17 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SHYC_RS07575 cda5337b0ef0455e2029b30cd4072978 251 PANTHER PTHR24421:SF10 17 246 5.2E-43 T 23-04-2016 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 Gene3D G3DSA:3.90.20.20 53 151 8.0E-30 T 23-04-2016 IPR013805 GrpE nucleotide exchange factor, coiled-coil SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 PANTHER PTHR21237 32 209 1.0E-53 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 SUPERFAMILY SSF58014 57 153 1.7E-25 T 23-04-2016 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 Hamap MF_01151 Protein GrpE [grpE]. 14 209 21.229 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 ProSitePatterns PS01071 grpE protein signature. 164 207 - T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 PRINTS PR00773 GrpE protein signature 79 95 4.7E-31 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 PRINTS PR00773 GrpE protein signature 107 122 4.7E-31 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 PRINTS PR00773 GrpE protein signature 188 207 4.7E-31 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 PRINTS PR00773 GrpE protein signature 161 176 4.7E-31 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 SUPERFAMILY SSF51064 154 209 8.63E-18 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 Pfam PF01025 GrpE 49 209 9.5E-50 T 23-04-2016 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 SHYC_RS06435 67c679b9bb25d9c6ad7d577b27b43266 209 Gene3D G3DSA:2.30.22.10 153 209 6.2E-25 T 23-04-2016 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 SHYC_RS06250 7f3535a3af95b34180d8e547747f1525 335 PANTHER PTHR30137:SF2 1 333 1.9E-121 T 23-04-2016 SHYC_RS06250 7f3535a3af95b34180d8e547747f1525 335 PANTHER PTHR30137 1 333 1.9E-121 T 23-04-2016 SHYC_RS06250 7f3535a3af95b34180d8e547747f1525 335 SUPERFAMILY SSF51679 7 328 4.83E-71 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHYC_RS06250 7f3535a3af95b34180d8e547747f1525 335 Gene3D G3DSA:3.20.20.30 7 330 2.8E-77 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHYC_RS06250 7f3535a3af95b34180d8e547747f1525 335 Pfam PF00296 Luciferase-like monooxygenase 19 298 1.2E-31 T 23-04-2016 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 SHYC_RS06250 7f3535a3af95b34180d8e547747f1525 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 328 8.0E-119 T 23-04-2016 IPR019949 Luciferase family oxidoreductase, group 1 SHYC_RS06205 fb634d6805a0bc5d675141b22ea2d1c2 150 SUPERFAMILY SSF69500 1 143 5.1E-48 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SHYC_RS06205 fb634d6805a0bc5d675141b22ea2d1c2 150 PANTHER PTHR10472 2 144 2.9E-52 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SHYC_RS06205 fb634d6805a0bc5d675141b22ea2d1c2 150 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 143 4.3E-46 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SHYC_RS06205 fb634d6805a0bc5d675141b22ea2d1c2 150 Gene3D G3DSA:3.50.80.10 1 144 1.9E-49 T 23-04-2016 IPR023509 D-Tyr tRNAtyr deacylase-like domain SHYC_RS06205 fb634d6805a0bc5d675141b22ea2d1c2 150 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 144 5.4E-48 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SHYC_RS06205 fb634d6805a0bc5d675141b22ea2d1c2 150 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 29.432 T 23-04-2016 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0005737|GO:0016788|GO:0019478 SHYC_RS02995 93b27e3af091aa558e81c9a184854002 147 PANTHER PTHR33164 5 143 1.4E-15 T 23-04-2016 SHYC_RS02995 93b27e3af091aa558e81c9a184854002 147 Pfam PF01047 MarR family 32 86 5.6E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS02995 93b27e3af091aa558e81c9a184854002 147 SUPERFAMILY SSF46785 6 141 2.73E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02995 93b27e3af091aa558e81c9a184854002 147 Gene3D G3DSA:1.10.10.10 7 138 6.9E-24 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02995 93b27e3af091aa558e81c9a184854002 147 SMART SM00347 23 122 7.9E-13 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS09900 b74358cfd988957e0bc6e1291efcb799 202 Gene3D G3DSA:3.20.10.10 96 194 4.9E-22 T 23-04-2016 SHYC_RS09900 b74358cfd988957e0bc6e1291efcb799 202 Gene3D G3DSA:3.30.470.10 1 69 1.9E-9 T 23-04-2016 SHYC_RS09900 b74358cfd988957e0bc6e1291efcb799 202 Pfam PF01063 Amino-transferase class IV 3 198 3.0E-26 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SHYC_RS09900 b74358cfd988957e0bc6e1291efcb799 202 SUPERFAMILY SSF56752 2 198 5.49E-26 T 23-04-2016 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: REACT_13 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 SUPERFAMILY SSF52540 3 210 4.75E-57 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 PRINTS PR00315 GTP-binding elongation factor signature 74 84 1.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 PRINTS PR00315 GTP-binding elongation factor signature 10 23 1.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 PRINTS PR00315 GTP-binding elongation factor signature 126 135 1.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 PRINTS PR00315 GTP-binding elongation factor signature 90 101 1.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 PRINTS PR00315 GTP-binding elongation factor signature 54 62 1.3E-14 T 23-04-2016 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 141 7.5E-25 T 23-04-2016 IPR005225 Small GTP-binding protein domain GO:0005525 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 Pfam PF00679 Elongation factor G C-terminus 399 477 3.9E-23 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 Gene3D G3DSA:2.40.50.250 486 580 1.1E-37 T 23-04-2016 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 PANTHER PTHR23115:SF14 1 596 1.8E-287 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 Gene3D G3DSA:3.40.50.300 3 207 2.8E-65 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 Gene3D G3DSA:3.30.70.240 403 478 3.5E-31 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 Gene3D G3DSA:2.40.30.10 208 306 5.4E-25 T 23-04-2016 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 SUPERFAMILY SSF54980 401 516 1.34E-26 T 23-04-2016 IPR009022 Elongation factor G, III-V domain SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 47 62 - T 23-04-2016 IPR031157 Tr-type G domain, conserved site SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 SUPERFAMILY SSF54980 305 390 6.47E-15 T 23-04-2016 IPR009022 Elongation factor G, III-V domain SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 8 602 3.9E-283 T 23-04-2016 IPR006298 GTP-binding protein TypA GO:0005525 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 SMART SM00838 398 483 1.1E-4 T 23-04-2016 IPR000640 Translation elongation factor EFG, V domain SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 SUPERFAMILY SSF50447 154 301 1.02E-28 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 Pfam PF03144 Elongation factor Tu domain 2 222 292 2.0E-11 T 23-04-2016 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 GO:0005525 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 Gene3D G3DSA:3.30.70.870 307 402 8.2E-38 T 23-04-2016 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 PANTHER PTHR23115 1 596 1.8E-287 T 23-04-2016 SHYC_RS08540 8c2add22e06c3c5ae5aa9bb3c73e32a5 615 Pfam PF00009 Elongation factor Tu GTP binding domain 7 198 8.0E-57 T 23-04-2016 SHYC_RS04005 ebcb6abb5ea493c5ff1014d10593efaa 187 Hamap MF_00784 Accessory gene regulator protein B [agrB]. 3 187 20.234 T 23-04-2016 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 SHYC_RS04005 ebcb6abb5ea493c5ff1014d10593efaa 187 Pfam PF04647 Accessory gene regulator B 9 178 6.2E-34 T 23-04-2016 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 SHYC_RS04005 ebcb6abb5ea493c5ff1014d10593efaa 187 SMART SM00793 6 187 3.8E-70 T 23-04-2016 IPR006741 Accessory gene regulator B GO:0008233|GO:0009372|GO:0009405|GO:0016021 SHYC_RS11660 091c6f0866e5897ab1eb4d13247f781b 204 PANTHER PTHR30086:SF0 1 204 6.7E-74 T 23-04-2016 SHYC_RS11660 091c6f0866e5897ab1eb4d13247f781b 204 Pfam PF01810 LysE type translocator 15 195 1.4E-27 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHYC_RS11660 091c6f0866e5897ab1eb4d13247f781b 204 PANTHER PTHR30086 1 204 6.7E-74 T 23-04-2016 IPR001123 Lysine-type exporter protein (LYSE/YGGA) GO:0006865|GO:0016020 SHYC_RS07690 51f560931fa846d5a5a9d2cb9c0e367d 126 Gene3D G3DSA:1.20.1500.10 2 113 4.5E-29 T 23-04-2016 IPR023378 YheA/YmcA-like domain SHYC_RS07690 51f560931fa846d5a5a9d2cb9c0e367d 126 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 7 111 2.4E-14 T 23-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA SHYC_RS07690 51f560931fa846d5a5a9d2cb9c0e367d 126 PIRSF PIRSF021287 1 115 2.2E-31 T 23-04-2016 IPR016783 Biofilm formation YmcA SHYC_RS07690 51f560931fa846d5a5a9d2cb9c0e367d 126 PANTHER PTHR38448 1 111 6.6E-31 T 23-04-2016 SHYC_RS07690 51f560931fa846d5a5a9d2cb9c0e367d 126 PANTHER PTHR38448:SF1 1 111 6.6E-31 T 23-04-2016 SHYC_RS07690 51f560931fa846d5a5a9d2cb9c0e367d 126 SUPERFAMILY SSF158622 2 113 6.41E-23 T 23-04-2016 IPR023378 YheA/YmcA-like domain SHYC_RS11470 d6344e279a5b2529263aa5489e8f8ad0 90 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 13 80 7.5E-26 T 23-04-2016 IPR018656 Domain of unknown function DUF2087 SHYC_RS11470 d6344e279a5b2529263aa5489e8f8ad0 90 SUPERFAMILY SSF143602 2 54 6.41E-5 T 23-04-2016 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 Pfam PF00871 Acetokinase family 5 390 5.9E-168 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 196.374 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 PRINTS PR00471 Acetate kinase family signature 322 338 3.9E-46 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 PRINTS PR00471 Acetate kinase family signature 377 389 3.9E-46 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 PRINTS PR00471 Acetate kinase family signature 300 313 3.9E-46 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 PRINTS PR00471 Acetate kinase family signature 5 16 3.9E-46 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 PRINTS PR00471 Acetate kinase family signature 173 186 3.9E-46 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 PRINTS PR00471 Acetate kinase family signature 203 224 3.9E-46 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 SUPERFAMILY SSF53067 157 394 3.6E-91 T 23-04-2016 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 PANTHER PTHR21060:SF11 1 393 4.5E-227 T 23-04-2016 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 23-04-2016 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 PANTHER PTHR21060 1 393 4.5E-227 T 23-04-2016 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 Gene3D G3DSA:3.30.420.40 205 394 2.6E-77 T 23-04-2016 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 SUPERFAMILY SSF53067 3 196 2.72E-72 T 23-04-2016 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 PIRSF PIRSF000722 1 398 3.8E-155 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 394 7.3E-171 T 23-04-2016 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|UniPathway: UPA00340 SHYC_RS05885 0cbbb46fb684e771f5b2f99b7688f670 398 Gene3D G3DSA:3.30.420.40 4 204 2.2E-15 T 23-04-2016 SHYC_RS03840 fec48382124ac3d4671b326970e7d151 108 Gene3D G3DSA:3.30.750.24 3 104 9.7E-30 T 23-04-2016 IPR002645 STAS domain SHYC_RS03840 fec48382124ac3d4671b326970e7d151 108 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 106 2.9E-32 T 23-04-2016 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 SHYC_RS03840 fec48382124ac3d4671b326970e7d151 108 SUPERFAMILY SSF52091 3 103 1.59E-23 T 23-04-2016 IPR002645 STAS domain SHYC_RS03840 fec48382124ac3d4671b326970e7d151 108 Pfam PF01740 STAS domain 5 99 3.7E-14 T 23-04-2016 IPR002645 STAS domain SHYC_RS03840 fec48382124ac3d4671b326970e7d151 108 PANTHER PTHR33495 1 101 4.9E-27 T 23-04-2016 SHYC_RS03840 fec48382124ac3d4671b326970e7d151 108 PANTHER PTHR33495:SF2 1 101 4.9E-27 T 23-04-2016 SHYC_RS00450 993237f1c192f76f44364391725035b0 620 PANTHER PTHR21075 1 616 2.3E-242 T 23-04-2016 SHYC_RS00450 993237f1c192f76f44364391725035b0 620 ProSitePatterns PS00850 Glycine radical domain signature. 581 589 - T 23-04-2016 IPR019777 Formate C-acetyltransferase glycine radical, conserved site SHYC_RS00450 993237f1c192f76f44364391725035b0 620 SUPERFAMILY SSF51998 26 590 2.24E-182 T 23-04-2016 SHYC_RS00450 993237f1c192f76f44364391725035b0 620 Gene3D G3DSA:3.20.70.20 28 590 1.1E-177 T 23-04-2016 SHYC_RS00450 993237f1c192f76f44364391725035b0 620 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 20 610 5.2E-179 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SHYC_RS00450 993237f1c192f76f44364391725035b0 620 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 21 610 5.9E-180 T 23-04-2016 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 SHYC_RS07865 bf031660a11e16ac3afb701798aea90c 426 PANTHER PTHR22939:SF78 198 426 1.1E-64 T 23-04-2016 SHYC_RS07865 bf031660a11e16ac3afb701798aea90c 426 SMART SM00228 185 256 6.5E-7 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS07865 bf031660a11e16ac3afb701798aea90c 426 SUPERFAMILY SSF50156 174 263 2.1E-18 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS07865 bf031660a11e16ac3afb701798aea90c 426 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 425 4.2E-86 T 23-04-2016 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 SHYC_RS07865 bf031660a11e16ac3afb701798aea90c 426 PANTHER PTHR22939 198 426 1.1E-64 T 23-04-2016 SHYC_RS07865 bf031660a11e16ac3afb701798aea90c 426 Pfam PF02163 Peptidase family M50 7 411 1.0E-69 T 23-04-2016 IPR008915 Peptidase M50 GO:0004222|GO:0006508 SHYC_RS07865 bf031660a11e16ac3afb701798aea90c 426 Pfam PF13180 PDZ domain 201 260 8.2E-13 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS07865 bf031660a11e16ac3afb701798aea90c 426 Gene3D G3DSA:2.30.42.10 166 265 2.0E-22 T 23-04-2016 IPR001478 PDZ domain GO:0005515 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 51 69 3.3E-43 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 75 93 3.3E-43 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 116 135 3.3E-43 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 7 25 3.3E-43 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 30 48 3.3E-43 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 Gene3D G3DSA:3.30.1360.80 5 150 3.0E-64 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 5 149 5.0E-56 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 10 143 1.0E-67 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 3 153 33.527 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 SUPERFAMILY SSF63411 3 150 8.61E-62 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 PANTHER PTHR35799 4 153 1.6E-92 T 23-04-2016 SHYC_RS03515 4c35bc19eac25486e4eb908a94677fa6 156 PIRSF PIRSF006160 3 154 4.4E-64 T 23-04-2016 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 SUPERFAMILY SSF46894 143 214 3.4E-21 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 SMART SM00448 1 115 7.8E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 Pfam PF00072 Response regulator receiver domain 3 115 5.8E-25 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 6.8E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 6.8E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 6.8E-14 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 208 1.2E-21 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 Gene3D G3DSA:1.10.10.10 122 214 1.5E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 SUPERFAMILY SSF52172 2 131 4.41E-30 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 SMART SM00421 151 208 3.0E-24 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 PANTHER PTHR26402 1 214 1.1E-90 T 23-04-2016 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 Gene3D G3DSA:3.40.50.2300 1 121 5.7E-30 T 23-04-2016 SHYC_RS02415 fefb1e5c69ceb4971dd1ba7d2a976567 216 PANTHER PTHR26402:SF458 1 214 1.1E-90 T 23-04-2016 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PANTHER PTHR10133 2 875 0.0 T 23-04-2016 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 601 623 2.3E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 738 749 2.3E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 792 808 2.3E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 624 639 2.3E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 677 690 2.3E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 760 771 2.3E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 822 835 2.3E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 647 670 2.3E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PRINTS PR00868 DNA-polymerase family A (pol I) signature 701 726 2.3E-78 T 23-04-2016 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 169 1.1E-54 T 23-04-2016 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 SMART SM00279 173 208 1.6E-16 T 23-04-2016 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 SUPERFAMILY SSF47807 171 287 8.07E-31 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 ProSitePatterns PS00447 DNA polymerase family A signature. 701 720 - T 23-04-2016 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 Gene3D G3DSA:1.10.150.20 659 765 1.7E-35 T 23-04-2016 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 SMART SM00482 632 839 1.6E-106 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 SUPERFAMILY SSF53098 311 466 8.8E-34 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 PANTHER PTHR10133:SF27 2 875 0.0 T 23-04-2016 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 SUPERFAMILY SSF88723 2 169 3.6E-53 T 23-04-2016 IPR029060 PIN domain-like SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 SUPERFAMILY SSF56672 470 875 6.23E-152 T 23-04-2016 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 Gene3D G3DSA:3.30.420.10 315 490 5.3E-48 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 SMART SM00475 2 262 1.1E-137 T 23-04-2016 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 Pfam PF00476 DNA polymerase family A 499 873 1.9E-152 T 23-04-2016 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 Gene3D G3DSA:3.30.70.370 766 875 8.3E-65 T 23-04-2016 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 Gene3D G3DSA:3.30.70.370 609 658 8.3E-65 T 23-04-2016 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 Gene3D G3DSA:1.20.1060.10 491 608 1.4E-39 T 23-04-2016 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 261 7.9E-32 T 23-04-2016 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 Gene3D G3DSA:3.40.50.1010 3 183 1.9E-69 T 23-04-2016 IPR029060 PIN domain-like SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 Gene3D G3DSA:1.10.150.20 184 244 1.1E-30 T 23-04-2016 SHYC_RS05975 394931c3763e30e6d3e2f72c63d88ee5 875 TIGRFAM TIGR00593 pola: DNA polymerase I 4 875 0.0 T 23-04-2016 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS05620 d9b2acbe2c1b2cec9356423e0de9d918 273 PANTHER PTHR11614 2 272 1.0E-46 T 23-04-2016 SHYC_RS05620 d9b2acbe2c1b2cec9356423e0de9d918 273 Pfam PF12146 Serine aminopeptidase, S33 9 243 9.3E-42 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 SHYC_RS05620 d9b2acbe2c1b2cec9356423e0de9d918 273 Gene3D G3DSA:3.40.50.1820 4 259 8.3E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS05620 d9b2acbe2c1b2cec9356423e0de9d918 273 PANTHER PTHR11614:SF87 2 272 1.0E-46 T 23-04-2016 SHYC_RS05620 d9b2acbe2c1b2cec9356423e0de9d918 273 SUPERFAMILY SSF53474 5 258 9.08E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 PANTHER PTHR22855 1 314 3.7E-123 T 23-04-2016 SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 SUPERFAMILY SSF52096 3 312 1.38E-96 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 PANTHER PTHR22855:SF42 1 314 3.7E-123 T 23-04-2016 SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 Gene3D G3DSA:3.90.226.10 52 267 8.4E-49 T 23-04-2016 IPR029045 ClpP/crotonase-like domain SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 1 312 48.382 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 1 144 4.9E-63 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 130 146 5.1E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 165 178 5.1E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 84 95 5.1E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 193 202 5.1E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 109 127 5.1E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 149 162 5.1E-46 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS05940 bfa1b9fbf4e8e46777e5547b3547d30e 314 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 1 314 9.4E-146 T 23-04-2016 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00253+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6679|MetaCyc: PWY-6722|MetaCyc: PWY-7388|UniPathway: UPA00655 SHYC_RS02765 1ddf33db60caed67f8a45c756284907f 463 PANTHER PTHR11785 3 460 2.5E-266 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS02765 1ddf33db60caed67f8a45c756284907f 463 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SHYC_RS02765 1ddf33db60caed67f8a45c756284907f 463 PANTHER PTHR11785:SF28 3 460 2.5E-266 T 23-04-2016 SHYC_RS02765 1ddf33db60caed67f8a45c756284907f 463 Pfam PF00324 Amino acid permease 16 426 2.4E-102 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SHYC_RS02765 1ddf33db60caed67f8a45c756284907f 463 PIRSF PIRSF006060 1 462 1.5E-72 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS00060 20866c70747c311487754e718f6f1c89 115 Hamap MF_00576 Gas vesicle structural protein [gvpA]. 5 90 24.391 T 23-04-2016 IPR000638 Gas vesicle protein GvpA GO:0005198|GO:0012506 SHYC_RS00060 20866c70747c311487754e718f6f1c89 115 ProSitePatterns PS00669 Gas vesicles protein GVPa signature 2. 46 59 - T 23-04-2016 IPR018493 Gas vesicle protein GvpA, conserved site GO:0005198|GO:0012506 SHYC_RS00060 20866c70747c311487754e718f6f1c89 115 PANTHER PTHR35344:SF3 9 76 2.2E-28 T 23-04-2016 SHYC_RS00060 20866c70747c311487754e718f6f1c89 115 ProSitePatterns PS00234 Gas vesicles protein GVPa signature 1. 13 27 - T 23-04-2016 IPR018493 Gas vesicle protein GvpA, conserved site GO:0005198|GO:0012506 SHYC_RS00060 20866c70747c311487754e718f6f1c89 115 Pfam PF00741 Gas vesicle protein 12 50 8.2E-16 T 23-04-2016 IPR000638 Gas vesicle protein GvpA GO:0005198|GO:0012506 SHYC_RS00060 20866c70747c311487754e718f6f1c89 115 PANTHER PTHR35344 9 76 2.2E-28 T 23-04-2016 SHYC_RS09355 beb07db746d12721312cf4d2982a1edb 80 SUPERFAMILY SSF117916 3 79 2.4E-26 T 23-04-2016 SHYC_RS09355 beb07db746d12721312cf4d2982a1edb 80 PANTHER PTHR11178 10 80 3.9E-36 T 23-04-2016 SHYC_RS09355 beb07db746d12721312cf4d2982a1edb 80 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 16 79 3.0E-27 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHYC_RS09355 beb07db746d12721312cf4d2982a1edb 80 Pfam PF01106 NifU-like domain 12 77 3.9E-27 T 23-04-2016 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 SUPERFAMILY SSF51735 48 290 8.62E-71 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 58 289 5.7E-54 T 23-04-2016 SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 137 8.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 254 274 8.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 236 8.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 188 8.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 50 67 8.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 217 8.0E-33 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 Gene3D G3DSA:3.40.50.720 44 290 4.4E-72 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 PANTHER PTHR24322 53 230 2.9E-53 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS02025 ca9c013ee1587dc8c67935e12451e6b4 293 PANTHER PTHR24322:SF399 53 230 2.9E-53 T 23-04-2016 SHYC_RS00975 3cee85320373f841b8c6a1cc3305d2d1 412 PANTHER PTHR11019 251 406 1.2E-31 T 23-04-2016 SHYC_RS00975 3cee85320373f841b8c6a1cc3305d2d1 412 PANTHER PTHR11019:SF123 251 406 1.2E-31 T 23-04-2016 SHYC_RS00975 3cee85320373f841b8c6a1cc3305d2d1 412 SUPERFAMILY SSF46689 298 349 1.08E-7 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS00975 3cee85320373f841b8c6a1cc3305d2d1 412 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 382 398 1.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHYC_RS00975 3cee85320373f841b8c6a1cc3305d2d1 412 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 367 382 1.7E-5 T 23-04-2016 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 SHYC_RS00975 3cee85320373f841b8c6a1cc3305d2d1 412 Gene3D G3DSA:1.10.10.60 352 402 3.8E-18 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS00975 3cee85320373f841b8c6a1cc3305d2d1 412 Pfam PF12833 Helix-turn-helix domain 321 399 2.1E-21 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHYC_RS00975 3cee85320373f841b8c6a1cc3305d2d1 412 SMART SM00342 315 398 2.6E-26 T 23-04-2016 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 SHYC_RS00975 3cee85320373f841b8c6a1cc3305d2d1 412 SUPERFAMILY SSF46689 351 401 9.86E-14 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS00975 3cee85320373f841b8c6a1cc3305d2d1 412 Gene3D G3DSA:1.10.10.60 297 351 8.6E-17 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS10415 f17d5e6a02d8f50f6dd92c61442023e6 182 Gene3D G3DSA:3.40.50.360 2 173 1.1E-33 T 23-04-2016 IPR029039 Flavoprotein-like domain SHYC_RS10415 f17d5e6a02d8f50f6dd92c61442023e6 182 Pfam PF03358 NADPH-dependent FMN reductase 2 108 2.9E-15 T 23-04-2016 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 SHYC_RS10415 f17d5e6a02d8f50f6dd92c61442023e6 182 PANTHER PTHR10204 1 172 4.3E-36 T 23-04-2016 SHYC_RS10415 f17d5e6a02d8f50f6dd92c61442023e6 182 PANTHER PTHR10204:SF5 1 172 4.3E-36 T 23-04-2016 SHYC_RS10415 f17d5e6a02d8f50f6dd92c61442023e6 182 SUPERFAMILY SSF52218 2 176 2.42E-31 T 23-04-2016 IPR029039 Flavoprotein-like domain SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 PANTHER PTHR11548 142 317 7.3E-167 T 23-04-2016 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 PANTHER PTHR11548 8 103 7.3E-167 T 23-04-2016 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 7 317 4.6E-156 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 ProSitePatterns PS00091 Thymidylate synthase active site. 180 208 - T 23-04-2016 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 Pfam PF00303 Thymidylate synthase 7 317 3.2E-114 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 PRINTS PR00108 Thymidylate synthase family signature 251 268 5.9E-50 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 PRINTS PR00108 Thymidylate synthase family signature 213 239 5.9E-50 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 PRINTS PR00108 Thymidylate synthase family signature 195 210 5.9E-50 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 PRINTS PR00108 Thymidylate synthase family signature 46 67 5.9E-50 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 PRINTS PR00108 Thymidylate synthase family signature 169 188 5.9E-50 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 Hamap MF_00008 Thymidylate synthase [thyA]. 5 317 43.655 T 23-04-2016 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 SUPERFAMILY SSF55831 5 317 7.33E-127 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 Gene3D G3DSA:3.30.572.10 3 98 8.7E-125 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS07140 7529332cc3ae983409c242e3b38fcc25 317 Gene3D G3DSA:3.30.572.10 137 317 8.7E-125 T 23-04-2016 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|UniPathway: UPA00575 SHYC_RS08965 99f128aad52196af2899b8b8cfb0fc9d 61 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 3 57 2.6E-27 T 23-04-2016 IPR018690 Protein of unknown function DUF2187 SHYC_RS08965 99f128aad52196af2899b8b8cfb0fc9d 61 PANTHER PTHR41269:SF1 2 61 1.3E-22 T 23-04-2016 SHYC_RS08965 99f128aad52196af2899b8b8cfb0fc9d 61 PANTHER PTHR41269 2 61 1.3E-22 T 23-04-2016 SHYC_RS07180 e7fe34c7e08aa4c1073796bbacee6856 169 Pfam PF00583 Acetyltransferase (GNAT) family 56 141 3.5E-5 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS07180 e7fe34c7e08aa4c1073796bbacee6856 169 SUPERFAMILY SSF55729 1 168 4.69E-21 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07180 e7fe34c7e08aa4c1073796bbacee6856 169 Gene3D G3DSA:3.40.630.30 1 169 1.1E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS00895 c720fab74782e88a64db4ea4a135c51b 221 PANTHER PTHR26402 1 220 2.4E-107 T 23-04-2016 SHYC_RS00895 c720fab74782e88a64db4ea4a135c51b 221 SMART SM00862 146 221 4.9E-14 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS00895 c720fab74782e88a64db4ea4a135c51b 221 Gene3D G3DSA:1.10.10.10 124 220 1.7E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00895 c720fab74782e88a64db4ea4a135c51b 221 Gene3D G3DSA:3.40.50.2300 1 122 2.3E-30 T 23-04-2016 SHYC_RS00895 c720fab74782e88a64db4ea4a135c51b 221 SMART SM00448 1 111 4.9E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS00895 c720fab74782e88a64db4ea4a135c51b 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 220 1.9E-18 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS00895 c720fab74782e88a64db4ea4a135c51b 221 Pfam PF00072 Response regulator receiver domain 3 105 1.8E-23 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS00895 c720fab74782e88a64db4ea4a135c51b 221 SUPERFAMILY SSF52172 1 174 3.95E-31 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS00895 c720fab74782e88a64db4ea4a135c51b 221 PANTHER PTHR26402:SF519 1 220 2.4E-107 T 23-04-2016 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PIRSF PIRSF000532 1 323 2.8E-119 T 23-04-2016 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 300 4.4E-131 T 23-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 Gene3D G3DSA:3.40.50.450 1 216 2.5E-74 T 23-04-2016 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 241 263 1.2E-87 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.2E-87 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.2E-87 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 140 158 1.2E-87 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 178 195 1.2E-87 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.2E-87 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 214 226 1.2E-87 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 122 139 1.2E-87 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 160 176 1.2E-87 T 23-04-2016 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PANTHER PTHR13697:SF4 1 305 5.4E-141 T 23-04-2016 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 SUPERFAMILY SSF53784 1 314 3.53E-112 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 PANTHER PTHR13697 1 305 5.4E-141 T 23-04-2016 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 322 47.031 T 23-04-2016 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 ProSitePatterns PS00433 Phosphofructokinase signature. 245 263 - T 23-04-2016 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS05945 6eb5a49d365ba7bd9ac01e189595726f 323 Pfam PF00365 Phosphofructokinase 3 277 7.9E-112 T 23-04-2016 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 PANTHER PTHR11659:SF0 3 475 4.8E-256 T 23-04-2016 SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 SMART SM00845 325 472 8.0E-75 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 SUPERFAMILY SSF89095 294 399 1.05E-35 T 23-04-2016 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related GO:0016884 SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 Gene3D G3DSA:1.10.10.410 417 472 1.9E-4 T 23-04-2016 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 Pfam PF02637 GatB domain 325 472 1.7E-54 T 23-04-2016 IPR018027 Asn/Gln amidotransferase GO:0016884 SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 SUPERFAMILY SSF55931 4 293 4.32E-122 T 23-04-2016 SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 Pfam PF02934 GatB/GatE catalytic domain 5 284 5.6E-113 T 23-04-2016 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 472 9.8E-181 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 141 155 - T 23-04-2016 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 PANTHER PTHR11659 3 475 4.8E-256 T 23-04-2016 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E GO:0016884 SHYC_RS04230 b2d00d4da34f8f0a69cc0dbc17bfa861 475 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 473 38.878 T 23-04-2016 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 Gene3D G3DSA:3.60.150.10 1 384 1.0E-141 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 PIRSF PIRSF001456 1 381 3.9E-121 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 Pfam PF01264 Chorismate synthase 1 363 4.0E-113 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 TIGRFAM TIGR00033 aroC: chorismate synthase 1 368 2.0E-120 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 PANTHER PTHR21085 104 388 7.2E-171 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 PANTHER PTHR21085 1 88 7.2E-171 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 SUPERFAMILY SSF103263 1 382 8.11E-136 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 ProSitePatterns PS00789 Chorismate synthase signature 3. 337 353 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 Hamap MF_00300 Chorismate synthase [aroC]. 1 370 33.764 T 23-04-2016 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 PANTHER PTHR21085:SF0 104 388 7.2E-171 T 23-04-2016 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 PANTHER PTHR21085:SF0 1 88 7.2E-171 T 23-04-2016 SHYC_RS06990 a18abf27cf164f549cdcfadf2ce06d68 388 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 23-04-2016 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS11185 826c037ddc23b4540add937e4f3ad030 139 PANTHER PTHR13355:SF5 32 127 8.0E-16 T 23-04-2016 SHYC_RS11185 826c037ddc23b4540add937e4f3ad030 139 SUPERFAMILY SSF55729 8 127 2.44E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS11185 826c037ddc23b4540add937e4f3ad030 139 PANTHER PTHR13355 32 127 8.0E-16 T 23-04-2016 SHYC_RS11185 826c037ddc23b4540add937e4f3ad030 139 Pfam PF13508 Acetyltransferase (GNAT) domain 41 120 3.0E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS11185 826c037ddc23b4540add937e4f3ad030 139 Gene3D G3DSA:3.40.630.30 8 128 2.2E-26 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS11845 43eae5b009132d67e92ffce78f5a6a9c 830 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 1 355 6.4E-59 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS11845 43eae5b009132d67e92ffce78f5a6a9c 830 PANTHER PTHR32294 1 577 1.8E-83 T 23-04-2016 SHYC_RS11845 43eae5b009132d67e92ffce78f5a6a9c 830 Pfam PF14579 Helix-hairpin-helix motif 444 531 4.0E-15 T 23-04-2016 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 SUPERFAMILY SSF52313 6 230 3.01E-99 T 23-04-2016 IPR023591 Ribosomal protein S2, flavodoxin-like domain SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 Gene3D G3DSA:1.10.287.610 100 152 4.3E-24 T 23-04-2016 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 43.375 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 Pfam PF00318 Ribosomal protein S2 9 224 1.5E-101 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.4E-41 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.4E-41 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.4E-41 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.4E-41 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.4E-41 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.4E-41 T 23-04-2016 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 Gene3D G3DSA:3.40.50.10490 158 250 1.6E-72 T 23-04-2016 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 Gene3D G3DSA:3.40.50.10490 23 99 1.6E-72 T 23-04-2016 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 PANTHER PTHR12534 1 250 4.4E-125 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 23-04-2016 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 SHYC_RS07900 254dda8c31d5fe220968588c0c2536e2 258 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 6.7E-111 T 23-04-2016 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 SHYC_RS06945 bb1648ffef63944f2454f36118e1bb40 223 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 214 1.6E-73 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SHYC_RS06945 bb1648ffef63944f2454f36118e1bb40 223 PANTHER PTHR21299 6 221 2.2E-65 T 23-04-2016 SHYC_RS06945 bb1648ffef63944f2454f36118e1bb40 223 SUPERFAMILY SSF52540 1 217 1.58E-46 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06945 bb1648ffef63944f2454f36118e1bb40 223 Hamap MF_00238 Cytidylate kinase [cmk]. 4 220 33.158 T 23-04-2016 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SHYC_RS06945 bb1648ffef63944f2454f36118e1bb40 223 Pfam PF02224 Cytidylate kinase 6 217 1.2E-72 T 23-04-2016 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 MetaCyc: PWY-7205 SHYC_RS06945 bb1648ffef63944f2454f36118e1bb40 223 Gene3D G3DSA:3.40.50.300 4 217 7.0E-70 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05310 dc52b03e6a7bbfde9e35f4629b50440e 154 Gene3D G3DSA:1.10.260.40 6 61 1.9E-9 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS05310 dc52b03e6a7bbfde9e35f4629b50440e 154 SMART SM00530 13 67 0.0025 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS05310 dc52b03e6a7bbfde9e35f4629b50440e 154 SUPERFAMILY SSF47413 10 62 8.85E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS05310 dc52b03e6a7bbfde9e35f4629b50440e 154 Pfam PF01381 Helix-turn-helix 15 61 3.0E-5 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS02495 3088e214c471867de939672030bf799e 149 SUPERFAMILY SSF81442 4 133 3.53E-5 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS02495 3088e214c471867de939672030bf799e 149 Gene3D G3DSA:1.20.210.10 6 132 1.8E-5 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS02495 3088e214c471867de939672030bf799e 149 Pfam PF11070 Protein of unknown function (DUF2871) 1 129 1.4E-42 T 23-04-2016 IPR021299 Protein of unknown function DUF2871 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 Gene3D G3DSA:3.40.1190.10 99 335 6.5E-72 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 Pfam PF08245 Mur ligase middle domain 108 309 8.0E-53 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 SUPERFAMILY SSF53623 99 331 1.57E-69 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 PANTHER PTHR23135:SF4 10 469 7.5E-163 T 23-04-2016 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 Gene3D G3DSA:3.90.190.20 336 475 6.8E-38 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 414 4.0E-17 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 475 2.1E-132 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 Gene3D G3DSA:3.40.1390.10 5 97 4.5E-20 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 484 30.905 T 23-04-2016 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 SUPERFAMILY SSF53244 332 468 3.05E-32 T 23-04-2016 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 SUPERFAMILY SSF63418 15 97 1.44E-18 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 Pfam PF01225 Mur ligase family, catalytic domain 26 76 1.0E-5 T 23-04-2016 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS09010 7beea7b54ccca92db58867a3f5c9d30d 494 PANTHER PTHR23135 10 469 7.5E-163 T 23-04-2016 SHYC_RS02550 1933d47104958c2d74de8478f768e16a 225 SUPERFAMILY SSF52172 4 174 3.62E-39 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS02550 1933d47104958c2d74de8478f768e16a 225 Pfam PF00072 Response regulator receiver domain 6 113 1.6E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS02550 1933d47104958c2d74de8478f768e16a 225 SMART SM00448 3 113 3.6E-33 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS02550 1933d47104958c2d74de8478f768e16a 225 PANTHER PTHR26402 3 224 4.5E-84 T 23-04-2016 SHYC_RS02550 1933d47104958c2d74de8478f768e16a 225 PANTHER PTHR26402:SF292 3 224 4.5E-84 T 23-04-2016 SHYC_RS02550 1933d47104958c2d74de8478f768e16a 225 Gene3D G3DSA:1.10.10.10 127 222 1.3E-30 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS02550 1933d47104958c2d74de8478f768e16a 225 Gene3D G3DSA:3.40.50.2300 3 123 7.2E-35 T 23-04-2016 SHYC_RS02550 1933d47104958c2d74de8478f768e16a 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 220 1.7E-24 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS02550 1933d47104958c2d74de8478f768e16a 225 SMART SM00862 146 221 2.2E-21 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS06555 f1b798d1b0ad3cedc74007cba4b18632 446 Pfam PF00270 DEAD/DEAH box helicase 28 191 2.8E-35 T 23-04-2016 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 SHYC_RS06555 f1b798d1b0ad3cedc74007cba4b18632 446 Pfam PF00271 Helicase conserved C-terminal domain 230 338 3.1E-25 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS06555 f1b798d1b0ad3cedc74007cba4b18632 446 SMART SM00490 257 338 9.4E-28 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS06555 f1b798d1b0ad3cedc74007cba4b18632 446 SUPERFAMILY SSF52540 72 360 1.18E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06555 f1b798d1b0ad3cedc74007cba4b18632 446 PANTHER PTHR24031 6 446 1.0E-191 T 23-04-2016 SHYC_RS06555 f1b798d1b0ad3cedc74007cba4b18632 446 Gene3D G3DSA:3.40.50.300 5 206 4.4E-61 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06555 f1b798d1b0ad3cedc74007cba4b18632 446 SMART SM00487 23 221 1.1E-41 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS06555 f1b798d1b0ad3cedc74007cba4b18632 446 PANTHER PTHR24031:SF280 6 446 1.0E-191 T 23-04-2016 SHYC_RS06555 f1b798d1b0ad3cedc74007cba4b18632 446 Gene3D G3DSA:3.40.50.300 207 370 5.1E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05555 1a5aaaa720a12bbc1a4611dd865b92b7 236 Gene3D G3DSA:3.20.20.70 7 230 2.1E-39 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS05555 1a5aaaa720a12bbc1a4611dd865b92b7 236 Pfam PF00923 Transaldolase 8 222 2.4E-37 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SHYC_RS05555 1a5aaaa720a12bbc1a4611dd865b92b7 236 TIGRFAM TIGR02134 transald_staph: transaldolase 1 236 3.3E-121 T 23-04-2016 IPR011861 Transaldolase, Staphylococcus-type SHYC_RS05555 1a5aaaa720a12bbc1a4611dd865b92b7 236 PANTHER PTHR10683:SF13 4 236 1.4E-104 T 23-04-2016 SHYC_RS05555 1a5aaaa720a12bbc1a4611dd865b92b7 236 SUPERFAMILY SSF51569 7 230 1.83E-48 T 23-04-2016 SHYC_RS05555 1a5aaaa720a12bbc1a4611dd865b92b7 236 PANTHER PTHR10683 4 236 1.4E-104 T 23-04-2016 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|UniPathway: UPA00115 SHYC_RS07780 2a7a6a3d960f8f9685d5d1c1431a49dd 238 Gene3D G3DSA:1.10.10.10 5 67 5.4E-10 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07780 2a7a6a3d960f8f9685d5d1c1431a49dd 238 Pfam PF07702 UTRA domain 92 227 8.5E-26 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SHYC_RS07780 2a7a6a3d960f8f9685d5d1c1431a49dd 238 Gene3D G3DSA:3.40.1410.10 68 236 2.9E-28 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SHYC_RS07780 2a7a6a3d960f8f9685d5d1c1431a49dd 238 SUPERFAMILY SSF46785 8 79 2.72E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07780 2a7a6a3d960f8f9685d5d1c1431a49dd 238 SUPERFAMILY SSF64288 72 236 2.51E-29 T 23-04-2016 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain SHYC_RS07780 2a7a6a3d960f8f9685d5d1c1431a49dd 238 SMART SM00345 10 69 0.0059 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS07780 2a7a6a3d960f8f9685d5d1c1431a49dd 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 4.3E-7 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS07780 2a7a6a3d960f8f9685d5d1c1431a49dd 238 SMART SM00866 91 230 2.0E-16 T 23-04-2016 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 SHYC_RS07995 1e5f04b22582966ce99b0b0371531d3a 167 Gene3D G3DSA:2.40.30.60 2 86 7.0E-17 T 23-04-2016 IPR002676 RimM protein GO:0006364 SHYC_RS07995 1e5f04b22582966ce99b0b0371531d3a 167 Gene3D G3DSA:2.30.30.240 97 164 1.9E-24 T 23-04-2016 SHYC_RS07995 1e5f04b22582966ce99b0b0371531d3a 167 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 2 164 24.895 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SHYC_RS07995 1e5f04b22582966ce99b0b0371531d3a 167 SUPERFAMILY SSF50447 3 86 6.36E-20 T 23-04-2016 IPR009000 Translation protein, beta-barrel domain SHYC_RS07995 1e5f04b22582966ce99b0b0371531d3a 167 Pfam PF05239 PRC-barrel domain 95 165 3.2E-12 T 23-04-2016 IPR027275 PRC-barrel domain SHYC_RS07995 1e5f04b22582966ce99b0b0371531d3a 167 Pfam PF01782 RimM N-terminal domain 4 86 1.0E-22 T 23-04-2016 IPR002676 RimM protein GO:0006364 SHYC_RS07995 1e5f04b22582966ce99b0b0371531d3a 167 PANTHER PTHR33692 3 167 1.1E-55 T 23-04-2016 SHYC_RS07995 1e5f04b22582966ce99b0b0371531d3a 167 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 3 164 2.6E-47 T 23-04-2016 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 SHYC_RS07995 1e5f04b22582966ce99b0b0371531d3a 167 SUPERFAMILY SSF50346 97 164 1.41E-18 T 23-04-2016 IPR011033 PRC-barrel-like SHYC_RS08075 e6435e4347a116c7941e9c9ec97050a1 124 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 2.0E-32 T 23-04-2016 IPR005531 Alkaline shock protein Asp23 SHYC_RS08075 e6435e4347a116c7941e9c9ec97050a1 124 PANTHER PTHR34297:SF2 1 123 5.4E-53 T 23-04-2016 SHYC_RS08075 e6435e4347a116c7941e9c9ec97050a1 124 PANTHER PTHR34297 1 123 5.4E-53 T 23-04-2016 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PRINTS PR01758 Capsule biosynthesis protein CapB signature 111 126 2.0E-72 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PRINTS PR01758 Capsule biosynthesis protein CapB signature 258 275 2.0E-72 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PRINTS PR01758 Capsule biosynthesis protein CapB signature 34 50 2.0E-72 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PRINTS PR01758 Capsule biosynthesis protein CapB signature 77 95 2.0E-72 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PRINTS PR01758 Capsule biosynthesis protein CapB signature 196 213 2.0E-72 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PRINTS PR01758 Capsule biosynthesis protein CapB signature 361 377 2.0E-72 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PRINTS PR01758 Capsule biosynthesis protein CapB signature 293 308 2.0E-72 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PRINTS PR01758 Capsule biosynthesis protein CapB signature 140 155 2.0E-72 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PRINTS PR01758 Capsule biosynthesis protein CapB signature 162 179 2.0E-72 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PRINTS PR01758 Capsule biosynthesis protein CapB signature 57 74 2.0E-72 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 Pfam PF08245 Mur ligase middle domain 37 200 6.2E-9 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 Gene3D G3DSA:3.40.1190.10 33 67 6.2E-10 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 Gene3D G3DSA:3.40.1190.10 100 173 6.2E-10 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PANTHER PTHR23135:SF12 1 342 1.1E-95 T 23-04-2016 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 PANTHER PTHR23135 1 342 1.1E-95 T 23-04-2016 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 TIGRFAM TIGR04012 poly_gGlu_PgsB: poly-gamma-glutamate synthase PgsB 2 380 3.5E-160 T 23-04-2016 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 SUPERFAMILY SSF53623 33 75 1.16E-14 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS01500 c4d7264100fcf10c3ab5cbcd43ec101b 386 SUPERFAMILY SSF53623 104 235 1.16E-14 T 23-04-2016 IPR013221 Mur ligase, central GO:0005524|GO:0009058 UniPathway: UPA00219 SHYC_RS02845 25bff539856e1cf265a5b15a975b1e5a 464 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 3 460 9.2E-126 T 23-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 SHYC_RS02845 25bff539856e1cf265a5b15a975b1e5a 464 Pfam PF03553 Na+/H+ antiporter family 157 456 2.1E-54 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SHYC_RS02845 25bff539856e1cf265a5b15a975b1e5a 464 PANTHER PTHR33451 1 464 2.2E-154 T 23-04-2016 SHYC_RS02845 25bff539856e1cf265a5b15a975b1e5a 464 PANTHER PTHR33451:SF3 1 464 2.2E-154 T 23-04-2016 SHYC_RS08915 feae8fea4c14c63678b789b1ad1f00f9 258 PANTHER PTHR30028 1 250 1.2E-75 T 23-04-2016 SHYC_RS08915 feae8fea4c14c63678b789b1ad1f00f9 258 Pfam PF03649 Uncharacterised protein family (UPF0014) 4 241 3.5E-72 T 23-04-2016 IPR005226 UPF0014 family SHYC_RS08915 feae8fea4c14c63678b789b1ad1f00f9 258 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 1 247 1.5E-70 T 23-04-2016 IPR005226 UPF0014 family SHYC_RS08915 feae8fea4c14c63678b789b1ad1f00f9 258 PANTHER PTHR30028:SF0 1 250 1.2E-75 T 23-04-2016 IPR005226 UPF0014 family SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 Gene3D G3DSA:3.30.870.10 503 681 1.1E-69 T 23-04-2016 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 PANTHER PTHR30218:SF0 5 704 0.0 T 23-04-2016 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 SUPERFAMILY SSF56024 504 682 2.24E-68 T 23-04-2016 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 Pfam PF02503 Polyphosphate kinase middle domain 131 325 7.7E-61 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 SUPERFAMILY SSF143724 117 314 1.41E-54 T 23-04-2016 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 PANTHER PTHR30218 5 704 0.0 T 23-04-2016 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 Hamap MF_00347 Polyphosphate kinase [ppk]. 10 682 32.081 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 Gene3D G3DSA:3.30.1840.10 116 301 4.2E-58 T 23-04-2016 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 678 1.7E-149 T 23-04-2016 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 SUPERFAMILY SSF56024 322 499 1.7E-54 T 23-04-2016 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 PIRSF PIRSF015589 1 695 4.5E-260 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 12 679 2.4E-265 T 23-04-2016 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 Gene3D G3DSA:3.30.870.10 327 502 1.6E-71 T 23-04-2016 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 Pfam PF13089 Polyphosphate kinase N-terminal domain 13 118 5.4E-36 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SHYC_RS04630 208d4634bb0b138d752fe80832762951 717 SUPERFAMILY SSF140356 10 114 4.19E-36 T 23-04-2016 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 SHYC_RS11865 c4720680c0cdff63dd6620a54231fb3f 144 Pfam PF06338 ComK protein 32 139 6.8E-6 T 23-04-2016 IPR010461 Competence protein ComK GO:0030420 SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 PANTHER PTHR24322:SF57 142 174 5.9E-27 T 23-04-2016 SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 PANTHER PTHR24322:SF57 5 126 5.9E-27 T 23-04-2016 SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 PANTHER PTHR24322 142 174 5.9E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 PANTHER PTHR24322 5 126 5.9E-27 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 Gene3D G3DSA:3.40.50.720 3 233 3.5E-53 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 5.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 116 132 5.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 163 180 5.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 161 5.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 216 5.8E-22 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 232 2.8E-36 T 23-04-2016 SHYC_RS07765 09dd50a5ee5bf7b318c20e6f37651c0a 234 SUPERFAMILY SSF51735 2 233 1.06E-54 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05065 1233a8c45bc34c23a42e84b24a4f8ab5 248 SUPERFAMILY SSF56399 40 245 7.68E-57 T 23-04-2016 SHYC_RS05065 1233a8c45bc34c23a42e84b24a4f8ab5 248 Pfam PF03496 ADP-ribosyltransferase exoenzyme 48 247 1.6E-47 T 23-04-2016 IPR003540 ADP ribosyltransferase GO:0005576|GO:0009405 SHYC_RS05065 1233a8c45bc34c23a42e84b24a4f8ab5 248 Gene3D G3DSA:3.90.176.10 39 247 9.5E-60 T 23-04-2016 SHYC_RS06235 8d14dcd88f245cd73264f9b80ce1ed15 139 Gene3D G3DSA:1.10.10.10 1 130 6.7E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06235 8d14dcd88f245cd73264f9b80ce1ed15 139 PANTHER PTHR33221:SF1 2 138 1.4E-47 T 23-04-2016 SHYC_RS06235 8d14dcd88f245cd73264f9b80ce1ed15 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 124 5.2E-33 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type SHYC_RS06235 8d14dcd88f245cd73264f9b80ce1ed15 139 Pfam PF02082 Transcriptional regulator 1 82 9.4E-26 T 23-04-2016 IPR000944 Transcription regulator Rrf2-type SHYC_RS06235 8d14dcd88f245cd73264f9b80ce1ed15 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 23-04-2016 IPR030489 Transcription regulator Rrf2-type, conserved site SHYC_RS06235 8d14dcd88f245cd73264f9b80ce1ed15 139 PANTHER PTHR33221 2 138 1.4E-47 T 23-04-2016 SHYC_RS06235 8d14dcd88f245cd73264f9b80ce1ed15 139 SUPERFAMILY SSF46785 2 126 1.09E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00245 dfaaae5c9a784c885609db2c47ae13bc 244 Pfam PF00975 Thioesterase domain 16 238 6.0E-33 T 23-04-2016 IPR001031 Thioesterase GO:0009058|GO:0016788 SHYC_RS00245 dfaaae5c9a784c885609db2c47ae13bc 244 PANTHER PTHR11487 17 234 1.0E-58 T 23-04-2016 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS GO:0009058 SHYC_RS00245 dfaaae5c9a784c885609db2c47ae13bc 244 SUPERFAMILY SSF53474 16 241 9.28E-35 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00245 dfaaae5c9a784c885609db2c47ae13bc 244 Gene3D G3DSA:3.40.50.1820 182 242 8.2E-22 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00245 dfaaae5c9a784c885609db2c47ae13bc 244 Gene3D G3DSA:3.40.50.1820 14 121 8.2E-22 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS11655 ba39f1e153cd7d8a3827daa9b8065fe5 74 Pfam PF13061 Protein of unknown function (DUF3923) 5 68 7.1E-20 T 23-04-2016 IPR025037 Protein of unknown function DUF3923 SHYC_RS10285 95caf6b4c25e4ae9bd77ee60e76c78c2 279 PANTHER PTHR30477:SF13 1 263 2.0E-109 T 23-04-2016 SHYC_RS10285 95caf6b4c25e4ae9bd77ee60e76c78c2 279 PANTHER PTHR30477 1 263 2.0E-109 T 23-04-2016 SHYC_RS10285 95caf6b4c25e4ae9bd77ee60e76c78c2 279 Gene3D G3DSA:1.10.3470.10 21 260 5.2E-9 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS10285 95caf6b4c25e4ae9bd77ee60e76c78c2 279 Pfam PF00950 ABC 3 transport family 10 264 4.0E-83 T 23-04-2016 IPR001626 ABC-3 GO:0005524|GO:0006810|GO:0016020|GO:0042626 SHYC_RS10285 95caf6b4c25e4ae9bd77ee60e76c78c2 279 SUPERFAMILY SSF81345 4 260 1.83E-45 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS06415 b0768d897a3c6bf1922e09e7b09478a6 82 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 12 78 4.0E-9 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06415 b0768d897a3c6bf1922e09e7b09478a6 82 Pfam PF01649 Ribosomal protein S20 2 80 1.4E-20 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06415 b0768d897a3c6bf1922e09e7b09478a6 82 Gene3D G3DSA:1.20.58.110 1 81 2.7E-20 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06415 b0768d897a3c6bf1922e09e7b09478a6 82 SUPERFAMILY SSF46992 3 80 5.62E-20 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06415 b0768d897a3c6bf1922e09e7b09478a6 82 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 81 11.939 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06415 b0768d897a3c6bf1922e09e7b09478a6 82 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 79 1.2E-18 T 23-04-2016 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06415 b0768d897a3c6bf1922e09e7b09478a6 82 PANTHER PTHR33398 1 82 1.3E-23 T 23-04-2016 SHYC_RS03310 4f8d59da3400ce1d125e54af6cc5c113 653 PANTHER PTHR34384:SF3 6 653 6.8E-167 T 23-04-2016 SHYC_RS03310 4f8d59da3400ce1d125e54af6cc5c113 653 Pfam PF06276 Ferric iron reductase FhuF-like transporter 466 637 8.5E-29 T 23-04-2016 IPR022770 Ferric iron reductase FhuF domain SHYC_RS03310 4f8d59da3400ce1d125e54af6cc5c113 653 PANTHER PTHR34384 6 653 6.8E-167 T 23-04-2016 SHYC_RS03310 4f8d59da3400ce1d125e54af6cc5c113 653 Pfam PF04183 IucA / IucC family 192 433 3.3E-58 T 23-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 SHYC_RS05180 2109a19cddadc3a349f6929b1900a1b7 202 Gene3D G3DSA:3.40.50.1810 143 198 1.8E-20 T 23-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 SHYC_RS05180 2109a19cddadc3a349f6929b1900a1b7 202 Gene3D G3DSA:3.40.50.1810 4 98 1.8E-20 T 23-04-2016 IPR007710 Nucleoside 2-deoxyribosyltransferase GO:0009159|GO:0050144|GO:0070694 SHYC_RS05180 2109a19cddadc3a349f6929b1900a1b7 202 SUPERFAMILY SSF52309 5 99 4.88E-8 T 23-04-2016 SHYC_RS08100 8578cd89d2520fa7354bc9c7f2c0dfaa 424 Pfam PF00067 Cytochrome P450 280 375 4.2E-14 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SHYC_RS08100 8578cd89d2520fa7354bc9c7f2c0dfaa 424 PANTHER PTHR24302:SF10 101 424 9.2E-31 T 23-04-2016 SHYC_RS08100 8578cd89d2520fa7354bc9c7f2c0dfaa 424 SUPERFAMILY SSF48264 12 399 2.62E-48 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SHYC_RS08100 8578cd89d2520fa7354bc9c7f2c0dfaa 424 PANTHER PTHR24302 101 424 9.2E-31 T 23-04-2016 SHYC_RS08100 8578cd89d2520fa7354bc9c7f2c0dfaa 424 Gene3D G3DSA:1.10.630.10 13 403 1.4E-39 T 23-04-2016 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 Reactome: REACT_13433 SHYC_RS06090 070b3023185b5470aeed032af8c2454d 358 Pfam PF05145 Putative ammonia monooxygenase 32 344 3.9E-75 T 23-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 SHYC_RS06090 070b3023185b5470aeed032af8c2454d 358 PANTHER PTHR38457:SF1 1 355 2.4E-74 T 23-04-2016 SHYC_RS06090 070b3023185b5470aeed032af8c2454d 358 PIRSF PIRSF038991 1 354 1.0E-86 T 23-04-2016 IPR007820 AbrB family GO:0010468|GO:0016021 SHYC_RS06090 070b3023185b5470aeed032af8c2454d 358 PANTHER PTHR38457 1 355 2.4E-74 T 23-04-2016 SHYC_RS06090 070b3023185b5470aeed032af8c2454d 358 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 11 165 9.5E-38 T 23-04-2016 IPR017516 AbrB duplication SHYC_RS06090 070b3023185b5470aeed032af8c2454d 358 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 189 344 3.1E-31 T 23-04-2016 IPR017516 AbrB duplication SHYC_RS10935 60bb4b0e7317a77fcebfc51a36098f46 128 Pfam PF04977 Septum formation initiator 41 118 2.0E-18 T 23-04-2016 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 SHYC_RS10935 60bb4b0e7317a77fcebfc51a36098f46 128 PANTHER PTHR40027 1 125 5.1E-25 T 23-04-2016 SHYC_RS10935 60bb4b0e7317a77fcebfc51a36098f46 128 PANTHER PTHR40027:SF1 1 125 5.1E-25 T 23-04-2016 SHYC_RS09020 035a94acd973d70356942e10d3bc30be 395 SUPERFAMILY SSF103473 10 391 7.06E-40 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS09020 035a94acd973d70356942e10d3bc30be 395 Gene3D G3DSA:1.20.1250.20 208 391 3.5E-17 T 23-04-2016 SHYC_RS09020 035a94acd973d70356942e10d3bc30be 395 Gene3D G3DSA:1.20.1250.20 13 195 8.3E-15 T 23-04-2016 SHYC_RS09020 035a94acd973d70356942e10d3bc30be 395 Pfam PF07690 Major Facilitator Superfamily 19 353 1.5E-26 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS09020 035a94acd973d70356942e10d3bc30be 395 PANTHER PTHR23519 1 394 6.3E-44 T 23-04-2016 SHYC_RS09695 8bf88f597c0a4fbc417ce010134ee562 78 Pfam PF09964 Uncharacterized protein conserved in bacteria (DUF2198) 3 74 2.7E-30 T 23-04-2016 IPR019242 Protein of unknown function DUF2198 SHYC_RS00825 f28a0b1ff5c50845d7f9a5755739617b 449 Pfam PF07670 Nucleoside recognition 313 414 8.1E-7 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS00825 f28a0b1ff5c50845d7f9a5755739617b 449 Pfam PF07670 Nucleoside recognition 154 249 8.0E-6 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS06635 6992f63cb30251fd00291e21efeaaa61 67 SUPERFAMILY SSF158379 5 63 1.28E-19 T 23-04-2016 IPR023164 YqgQ-like domain SHYC_RS06635 6992f63cb30251fd00291e21efeaaa61 67 Pfam PF06014 Bacterial protein of unknown function (DUF910) 6 63 5.1E-23 T 23-04-2016 IPR009256 Protein of unknown function DUF910 SHYC_RS06635 6992f63cb30251fd00291e21efeaaa61 67 PANTHER PTHR41311 2 66 7.6E-16 T 23-04-2016 SHYC_RS06635 6992f63cb30251fd00291e21efeaaa61 67 Gene3D G3DSA:1.10.287.760 5 63 9.8E-22 T 23-04-2016 IPR023164 YqgQ-like domain SHYC_RS06255 7c31f73fed0fc6215d72c3bd06b1b207 381 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 192 211 - T 23-04-2016 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site SHYC_RS06255 7c31f73fed0fc6215d72c3bd06b1b207 381 PIRSF PIRSF005572 1 380 2.5E-123 T 23-04-2016 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 SHYC_RS06255 7c31f73fed0fc6215d72c3bd06b1b207 381 PANTHER PTHR11601 3 372 6.2E-159 T 23-04-2016 SHYC_RS06255 7c31f73fed0fc6215d72c3bd06b1b207 381 SUPERFAMILY SSF53383 3 373 2.48E-98 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS06255 7c31f73fed0fc6215d72c3bd06b1b207 381 PANTHER PTHR11601:SF45 3 372 6.2E-159 T 23-04-2016 SHYC_RS06255 7c31f73fed0fc6215d72c3bd06b1b207 381 Gene3D G3DSA:3.90.1150.10 247 372 6.7E-31 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS06255 7c31f73fed0fc6215d72c3bd06b1b207 381 Pfam PF00266 Aminotransferase class-V 3 363 1.6E-80 T 23-04-2016 IPR000192 Aminotransferase class V domain SHYC_RS06255 7c31f73fed0fc6215d72c3bd06b1b207 381 Gene3D G3DSA:3.40.640.10 15 246 1.1E-85 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS01845 e007739839b9f28936837496345fe774 311 SUPERFAMILY SSF161111 17 217 7.59E-60 T 23-04-2016 SHYC_RS01845 e007739839b9f28936837496345fe774 311 SUPERFAMILY SSF160240 224 297 4.05E-9 T 23-04-2016 SHYC_RS01845 e007739839b9f28936837496345fe774 311 Gene3D G3DSA:1.20.1510.10 20 216 2.5E-61 T 23-04-2016 IPR027469 Cation efflux protein transmembrane domain SHYC_RS01845 e007739839b9f28936837496345fe774 311 PANTHER PTHR11562:SF17 8 304 5.4E-104 T 23-04-2016 SHYC_RS01845 e007739839b9f28936837496345fe774 311 Pfam PF01545 Cation efflux family 23 216 1.3E-51 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHYC_RS01845 e007739839b9f28936837496345fe774 311 PANTHER PTHR11562 8 304 5.4E-104 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHYC_RS01845 e007739839b9f28936837496345fe774 311 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 20 297 6.3E-90 T 23-04-2016 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 SHYC_RS02440 e6e7a3cee1f293216b4b793c13d20a14 300 PANTHER PTHR22911:SF23 1 300 1.2E-59 T 23-04-2016 SHYC_RS02440 e6e7a3cee1f293216b4b793c13d20a14 300 SUPERFAMILY SSF103481 68 153 1.44E-7 T 23-04-2016 SHYC_RS02440 e6e7a3cee1f293216b4b793c13d20a14 300 SUPERFAMILY SSF103481 208 297 1.31E-7 T 23-04-2016 SHYC_RS02440 e6e7a3cee1f293216b4b793c13d20a14 300 Pfam PF00892 EamA-like transporter family 163 296 1.4E-19 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHYC_RS02440 e6e7a3cee1f293216b4b793c13d20a14 300 Pfam PF00892 EamA-like transporter family 10 150 2.1E-20 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHYC_RS02440 e6e7a3cee1f293216b4b793c13d20a14 300 PANTHER PTHR22911 1 300 1.2E-59 T 23-04-2016 SHYC_RS00250 6a3b043708090cb16fe7123297a42d89 233 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 128 202 7.7E-11 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS00250 6a3b043708090cb16fe7123297a42d89 233 SUPERFAMILY SSF56214 43 120 8.89E-17 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS00250 6a3b043708090cb16fe7123297a42d89 233 Gene3D G3DSA:3.90.470.20 140 206 8.1E-13 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS00250 6a3b043708090cb16fe7123297a42d89 233 PANTHER PTHR12215 38 201 7.6E-20 T 23-04-2016 SHYC_RS00250 6a3b043708090cb16fe7123297a42d89 233 SUPERFAMILY SSF56214 127 227 9.42E-15 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS00250 6a3b043708090cb16fe7123297a42d89 233 Gene3D G3DSA:3.90.470.20 43 139 2.5E-23 T 23-04-2016 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 SHYC_RS01120 b1ad2ef86e7883b5b66cbc1711be618e 349 Pfam PF02687 FtsX-like permease family 233 344 3.4E-9 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHYC_RS01120 b1ad2ef86e7883b5b66cbc1711be618e 349 PANTHER PTHR30489:SF3 2 349 2.4E-79 T 23-04-2016 SHYC_RS01120 b1ad2ef86e7883b5b66cbc1711be618e 349 PANTHER PTHR30489 2 349 2.4E-79 T 23-04-2016 SHYC_RS00575 2dfa3d9e0e23e6d4e7bc914c8ff843d9 262 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 2 256 4.1E-87 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS00575 2dfa3d9e0e23e6d4e7bc914c8ff843d9 262 Pfam PF04507 Protein of unknown function, DUF576 2 259 2.2E-99 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS09390 1e02fa8fe98db4db24f5547578906d89 145 Pfam PF01934 Protein of unknown function DUF86 14 123 6.4E-16 T 23-04-2016 IPR008201 Protein of unknown function DUF86 SHYC_RS09390 1e02fa8fe98db4db24f5547578906d89 145 Gene3D G3DSA:1.20.120.580 1 138 2.7E-44 T 23-04-2016 SHYC_RS09390 1e02fa8fe98db4db24f5547578906d89 145 PANTHER PTHR33397 31 132 1.4E-15 T 23-04-2016 SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 PANTHER PTHR21087 8 173 3.6E-44 T 23-04-2016 SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 Pfam PF01202 Shikimate kinase 16 169 3.4E-41 T 23-04-2016 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 SUPERFAMILY SSF52540 9 166 1.07E-24 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 PRINTS PR01100 Shikimate kinase family signature 101 118 1.4E-20 T 23-04-2016 SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 PRINTS PR01100 Shikimate kinase family signature 79 88 1.4E-20 T 23-04-2016 SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 PRINTS PR01100 Shikimate kinase family signature 62 70 1.4E-20 T 23-04-2016 SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 PRINTS PR01100 Shikimate kinase family signature 34 47 1.4E-20 T 23-04-2016 SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 PRINTS PR01100 Shikimate kinase family signature 10 25 1.4E-20 T 23-04-2016 SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 Hamap MF_00109 Shikimate kinase [aroK]. 7 171 25.061 T 23-04-2016 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 Gene3D G3DSA:3.40.50.300 7 170 1.3E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06685 7c6156da25688433265859a97d48ad07 176 ProSitePatterns PS01128 Shikimate kinase signature. 63 87 - T 23-04-2016 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163|UniPathway: UPA00053 SHYC_RS10710 e63a50eb20ebba5fd916391df10fb2d6 250 SUPERFAMILY SSF75217 67 243 4.06E-50 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases SHYC_RS10710 e63a50eb20ebba5fd916391df10fb2d6 250 Gene3D G3DSA:3.30.1330.30 2 75 5.7E-21 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like SHYC_RS10710 e63a50eb20ebba5fd916391df10fb2d6 250 Pfam PF00588 SpoU rRNA Methylase family 96 236 5.1E-41 T 23-04-2016 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 SHYC_RS10710 e63a50eb20ebba5fd916391df10fb2d6 250 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 6 78 1.6E-20 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SHYC_RS10710 e63a50eb20ebba5fd916391df10fb2d6 250 Gene3D G3DSA:3.40.1280.10 90 242 1.5E-52 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHYC_RS10710 e63a50eb20ebba5fd916391df10fb2d6 250 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 3 242 1.3E-80 T 23-04-2016 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 SHYC_RS10710 e63a50eb20ebba5fd916391df10fb2d6 250 SUPERFAMILY SSF55315 3 76 3.53E-16 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like SHYC_RS10710 e63a50eb20ebba5fd916391df10fb2d6 250 SMART SM00967 5 79 1.1E-18 T 23-04-2016 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 SHYC_RS10710 e63a50eb20ebba5fd916391df10fb2d6 250 PANTHER PTHR12029 4 242 3.4E-81 T 23-04-2016 SHYC_RS10315 297ba4ca77dd3473ad2412ccfdca369b 114 PANTHER PTHR34583:SF2 1 114 2.7E-36 T 23-04-2016 SHYC_RS10315 297ba4ca77dd3473ad2412ccfdca369b 114 PANTHER PTHR34583 1 114 2.7E-36 T 23-04-2016 SHYC_RS10315 297ba4ca77dd3473ad2412ccfdca369b 114 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 8.9E-28 T 23-04-2016 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 SHYC_RS05840 a8c9109c41ce5287b336f6748dd67397 152 PANTHER PTHR21021 1 146 7.2E-51 T 23-04-2016 SHYC_RS05840 a8c9109c41ce5287b336f6748dd67397 152 Gene3D G3DSA:3.30.450.40 8 150 2.0E-46 T 23-04-2016 IPR029016 GAF domain-like SHYC_RS05840 a8c9109c41ce5287b336f6748dd67397 152 SUPERFAMILY SSF55781 12 148 2.8E-36 T 23-04-2016 IPR029016 GAF domain-like SHYC_RS05840 a8c9109c41ce5287b336f6748dd67397 152 Pfam PF01590 GAF domain 68 144 1.0E-4 T 23-04-2016 IPR003018 GAF domain GO:0005515 SHYC_RS05840 a8c9109c41ce5287b336f6748dd67397 152 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 91 108 - T 23-04-2016 IPR000614 Free Met sulfoxide reductase conserved site SHYC_RS08485 e3877e6e9ca12e3a4a66ff0c293c5ece 145 PANTHER PTHR38448:SF2 1 144 1.5E-59 T 23-04-2016 SHYC_RS08485 e3877e6e9ca12e3a4a66ff0c293c5ece 145 Gene3D G3DSA:1.20.1500.10 7 124 1.9E-25 T 23-04-2016 IPR023378 YheA/YmcA-like domain SHYC_RS08485 e3877e6e9ca12e3a4a66ff0c293c5ece 145 SUPERFAMILY SSF158622 6 125 1.57E-30 T 23-04-2016 IPR023378 YheA/YmcA-like domain SHYC_RS08485 e3877e6e9ca12e3a4a66ff0c293c5ece 145 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 114 2.6E-20 T 23-04-2016 IPR010368 Control of competence regulator ComK, YlbF/YmcA SHYC_RS08485 e3877e6e9ca12e3a4a66ff0c293c5ece 145 PANTHER PTHR38448 1 144 1.5E-59 T 23-04-2016 SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 Gene3D G3DSA:3.40.800.20 6 377 5.0E-87 T 23-04-2016 IPR023801 Histone deacetylase domain SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PRINTS PR01272 Acetoin utilisation ACUC protein signature 20 40 9.4E-40 T 23-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PRINTS PR01272 Acetoin utilisation ACUC protein signature 338 354 9.4E-40 T 23-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PRINTS PR01272 Acetoin utilisation ACUC protein signature 111 124 9.4E-40 T 23-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PRINTS PR01272 Acetoin utilisation ACUC protein signature 90 104 9.4E-40 T 23-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PRINTS PR01272 Acetoin utilisation ACUC protein signature 317 336 9.4E-40 T 23-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PRINTS PR01272 Acetoin utilisation ACUC protein signature 278 294 9.4E-40 T 23-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PRINTS PR01272 Acetoin utilisation ACUC protein signature 355 374 9.4E-40 T 23-04-2016 IPR003085 Acetoin utilization protein AcuC GO:0045149 UniPathway: UPA00040 SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 SUPERFAMILY SSF52768 8 355 1.01E-95 T 23-04-2016 SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PANTHER PTHR10625:SF10 5 338 6.8E-107 T 23-04-2016 SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PANTHER PTHR10625 5 338 6.8E-107 T 23-04-2016 IPR000286 Histone deacetylase superfamily SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 Pfam PF00850 Histone deacetylase domain 26 321 7.8E-69 T 23-04-2016 IPR023801 Histone deacetylase domain SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PRINTS PR01270 Histone deacetylase superfamily signature 167 182 9.5E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PRINTS PR01270 Histone deacetylase superfamily signature 253 263 9.5E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily SHYC_RS05765 5a42dd6d5ca030d7d2a57e20804376a8 385 PRINTS PR01270 Histone deacetylase superfamily signature 134 157 9.5E-16 T 23-04-2016 IPR000286 Histone deacetylase superfamily SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 Pfam PF00696 Amino acid kinase family 3 294 7.4E-29 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 PRINTS PR01469 Bacterial carbamate kinase signature 42 61 2.6E-60 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 PRINTS PR01469 Bacterial carbamate kinase signature 109 128 2.6E-60 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 PRINTS PR01469 Bacterial carbamate kinase signature 182 200 2.6E-60 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 PRINTS PR01469 Bacterial carbamate kinase signature 212 227 2.6E-60 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 PRINTS PR01469 Bacterial carbamate kinase signature 159 178 2.6E-60 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 PRINTS PR01469 Bacterial carbamate kinase signature 267 282 2.6E-60 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 PRINTS PR01469 Bacterial carbamate kinase signature 74 92 2.6E-60 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 PANTHER PTHR30409 1 313 4.4E-138 T 23-04-2016 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 PIRSF PIRSF000723 1 313 7.7E-118 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 PANTHER PTHR30409:SF1 1 313 4.4E-138 T 23-04-2016 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 SUPERFAMILY SSF53633 3 311 3.01E-77 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 Gene3D G3DSA:3.40.1160.10 3 312 7.2E-104 T 23-04-2016 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: REACT_13 SHYC_RS00835 2a432a449e12b667dc33d742f3928e92 313 TIGRFAM TIGR00746 arcC: carbamate kinase 3 311 2.0E-118 T 23-04-2016 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 PIRSF PIRSF001491 3 391 2.4E-160 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 Gene3D G3DSA:3.30.70.1250 100 216 1.2E-55 T 23-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 PANTHER PTHR21110 5 392 9.8E-160 T 23-04-2016 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 Hamap MF_00740 Phosphopentomutase [deoB]. 4 387 52.681 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 TIGRFAM TIGR01696 deoB: phosphopentomutase 6 385 1.9E-214 T 23-04-2016 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 SUPERFAMILY SSF143856 100 216 4.32E-50 T 23-04-2016 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180|UniPathway: UPA00087 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 Pfam PF01676 Metalloenzyme superfamily 6 378 5.7E-37 T 23-04-2016 IPR006124 Metalloenzyme GO:0003824|GO:0046872 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 SUPERFAMILY SSF53649 4 100 5.23E-75 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 SUPERFAMILY SSF53649 217 390 5.23E-75 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 Gene3D G3DSA:3.40.720.10 220 391 4.0E-74 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 Gene3D G3DSA:3.40.720.10 2 99 4.0E-74 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHYC_RS01660 23a14b9b2268bb837a38116f92f1d73f 392 PANTHER PTHR21110:SF0 5 392 9.8E-160 T 23-04-2016 SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 SUPERFAMILY SSF54106 26 70 2.09E-11 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 SUPERFAMILY SSF54106 91 135 5.36E-13 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 SUPERFAMILY SSF54106 161 206 9.81E-12 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 PANTHER PTHR33308:SF2 214 341 1.7E-22 T 23-04-2016 SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 Pfam PF05257 CHAP domain 235 316 4.9E-13 T 23-04-2016 IPR007921 CHAP domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 SMART SM00257 163 206 8.0E-17 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 SMART SM00257 27 70 7.2E-15 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 SMART SM00257 92 135 1.3E-18 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 SUPERFAMILY SSF54001 231 331 1.86E-15 T 23-04-2016 SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 Pfam PF01476 LysM domain 93 135 1.6E-16 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 Pfam PF01476 LysM domain 164 206 2.4E-14 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 Pfam PF01476 LysM domain 28 70 3.2E-12 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 PANTHER PTHR33308 214 341 1.7E-22 T 23-04-2016 SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 Gene3D G3DSA:3.10.350.10 91 135 5.2E-21 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 Gene3D G3DSA:3.10.350.10 161 206 2.7E-19 T 23-04-2016 IPR018392 LysM domain SHYC_RS11170 ce2b5a65b246acfdedac8bd331a155e4 341 Gene3D G3DSA:3.10.350.10 26 70 4.5E-17 T 23-04-2016 IPR018392 LysM domain SHYC_RS05150 3549baad7f153f0afbcb3ecaaa277604 138 SUPERFAMILY SSF50199 13 110 1.11E-15 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SHYC_RS05150 3549baad7f153f0afbcb3ecaaa277604 138 Gene3D G3DSA:2.40.50.90 12 110 2.1E-18 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SHYC_RS05150 3549baad7f153f0afbcb3ecaaa277604 138 SMART SM00318 13 131 0.0023 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SHYC_RS05150 3549baad7f153f0afbcb3ecaaa277604 138 Pfam PF00565 Staphylococcal nuclease homologue 41 122 2.5E-7 T 23-04-2016 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold SHYC_RS01280 99b1a3e4a22671c1258990431665c88d 369 SUPERFAMILY SSF46785 2 52 4.2E-7 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01280 99b1a3e4a22671c1258990431665c88d 369 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 47 1.6E-10 T 23-04-2016 SHYC_RS01280 99b1a3e4a22671c1258990431665c88d 369 PANTHER PTHR10584 41 368 7.2E-184 T 23-04-2016 SHYC_RS01280 99b1a3e4a22671c1258990431665c88d 369 Gene3D G3DSA:3.40.1190.20 59 366 2.6E-63 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS01280 99b1a3e4a22671c1258990431665c88d 369 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 304 317 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SHYC_RS01280 99b1a3e4a22671c1258990431665c88d 369 Pfam PF00294 pfkB family carbohydrate kinase 60 346 8.7E-45 T 23-04-2016 IPR011611 Carbohydrate kinase PfkB SHYC_RS01280 99b1a3e4a22671c1258990431665c88d 369 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 23-04-2016 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 SHYC_RS01280 99b1a3e4a22671c1258990431665c88d 369 Gene3D G3DSA:1.10.10.10 6 47 1.9E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01280 99b1a3e4a22671c1258990431665c88d 369 SUPERFAMILY SSF53613 59 358 6.08E-52 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS01280 99b1a3e4a22671c1258990431665c88d 369 PANTHER PTHR10584:SF193 41 368 7.2E-184 T 23-04-2016 SHYC_RS01925 fb44860aff832c6420410921d22678d5 319 Pfam PF01032 FecCD transport family 9 314 1.6E-51 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS01925 fb44860aff832c6420410921d22678d5 319 PANTHER PTHR30472:SF19 11 319 3.5E-118 T 23-04-2016 SHYC_RS01925 fb44860aff832c6420410921d22678d5 319 SUPERFAMILY SSF81345 7 315 8.11E-56 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS01925 fb44860aff832c6420410921d22678d5 319 Gene3D G3DSA:1.10.3470.10 33 317 3.7E-55 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS01925 fb44860aff832c6420410921d22678d5 319 PANTHER PTHR30472 11 319 3.5E-118 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS09805 1773af8b56c73eb602f29a892cc78f57 104 SUPERFAMILY SSF161219 5 90 7.19E-20 T 23-04-2016 SHYC_RS09805 1773af8b56c73eb602f29a892cc78f57 104 PIRSF PIRSF017292 1 104 1.8E-44 T 23-04-2016 IPR016694 Protein of unknown function UCP017292, zinc finger, CHY-type SHYC_RS09805 1773af8b56c73eb602f29a892cc78f57 104 Pfam PF05495 CHY zinc finger 15 88 9.2E-13 T 23-04-2016 IPR008913 Zinc finger, CHY-type GO:0008270 SHYC_RS09805 1773af8b56c73eb602f29a892cc78f57 104 PANTHER PTHR28082 17 104 1.4E-38 T 23-04-2016 SHYC_RS09805 1773af8b56c73eb602f29a892cc78f57 104 PANTHER PTHR28082:SF1 17 104 1.4E-38 T 23-04-2016 SHYC_RS02360 9f1fd64269aa983543fcb8d210ffb7d8 153 Gene3D G3DSA:3.40.50.720 1 108 5.7E-27 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02360 9f1fd64269aa983543fcb8d210ffb7d8 153 SUPERFAMILY SSF51735 1 96 8.12E-17 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS02360 9f1fd64269aa983543fcb8d210ffb7d8 153 Pfam PF13241 Putative NAD(P)-binding 6 109 8.0E-20 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SHYC_RS02360 9f1fd64269aa983543fcb8d210ffb7d8 153 PANTHER PTHR35330 1 151 1.7E-37 T 23-04-2016 SHYC_RS02360 9f1fd64269aa983543fcb8d210ffb7d8 153 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 129 4.2E-18 T 23-04-2016 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377|UniPathway: UPA00148|UniPathway: UPA00148|UniPathway: UPA00262|UniPathway: UPA00262|UniPathway: UPA00262 SHYC_RS04750 5f03189aa0ec524148f6cfaa59e29e2e 332 SUPERFAMILY SSF56349 25 329 2.18E-24 T 23-04-2016 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 SHYC_RS04750 5f03189aa0ec524148f6cfaa59e29e2e 332 Pfam PF00589 Phage integrase family 146 318 2.7E-12 T 23-04-2016 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS04750 5f03189aa0ec524148f6cfaa59e29e2e 332 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 28 106 2.6E-9 T 23-04-2016 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 SHYC_RS04750 5f03189aa0ec524148f6cfaa59e29e2e 332 Gene3D G3DSA:1.10.150.130 26 107 2.5E-6 T 23-04-2016 IPR023109 Integrase/recombinase, N-terminal SHYC_RS04750 5f03189aa0ec524148f6cfaa59e29e2e 332 Gene3D G3DSA:1.10.443.10 146 327 1.6E-14 T 23-04-2016 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 Gene3D G3DSA:3.40.1190.20 2 262 1.8E-79 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 Pfam PF02110 Hydroxyethylthiazole kinase family 4 249 9.1E-79 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 82 99 1.2E-33 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 56 64 1.2E-33 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 113 127 1.2E-33 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 12 19 1.2E-33 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 25 46 1.2E-33 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 156 173 1.2E-33 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 4 251 2.4E-78 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 SUPERFAMILY SSF53613 2 258 8.73E-55 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 PANTHER PTHR20857:SF19 1 262 2.4E-76 T 23-04-2016 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 PIRSF PIRSF000513 1 262 6.1E-86 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 6 258 29.159 T 23-04-2016 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03735 b147db5e0f45bd04cee1146e5a02685e 265 PANTHER PTHR20857 1 262 2.4E-76 T 23-04-2016 SHYC_RS09320 bb41eef6fe4db42318107c04086ce337 437 Pfam PF13726 Na+-H+ antiporter family 2 88 7.8E-33 T 23-04-2016 IPR032813 Putative Na+/H+ antiporter, N-terminal SHYC_RS09320 bb41eef6fe4db42318107c04086ce337 437 Pfam PF03553 Na+/H+ antiporter family 151 430 4.3E-60 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SHYC_RS09320 bb41eef6fe4db42318107c04086ce337 437 PANTHER PTHR37821 1 437 1.8E-162 T 23-04-2016 SHYC_RS05265 b8740ad8e42b436c56b876db44dcbf61 199 Pfam PF05866 Endodeoxyribonuclease RusA 46 136 1.5E-6 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 SHYC_RS05265 b8740ad8e42b436c56b876db44dcbf61 199 Gene3D G3DSA:3.30.1330.70 10 137 1.3E-12 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 SHYC_RS05265 b8740ad8e42b436c56b876db44dcbf61 199 SUPERFAMILY SSF103084 10 137 1.26E-14 T 23-04-2016 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 SHYC_RS00670 30cd6160f15c3426df498492123742ed 68 Gene3D G3DSA:1.10.260.40 1 65 1.6E-15 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS00670 30cd6160f15c3426df498492123742ed 68 PANTHER PTHR37301 1 67 5.6E-27 T 23-04-2016 SHYC_RS00670 30cd6160f15c3426df498492123742ed 68 SUPERFAMILY SSF47413 2 65 1.1E-14 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS00670 30cd6160f15c3426df498492123742ed 68 SMART SM00530 5 61 4.2E-6 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS00670 30cd6160f15c3426df498492123742ed 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 66 1.8E-21 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS06750 cb46628b4eedd6609bc05a99693dbfeb 130 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 1 130 20.559 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 SHYC_RS06750 cb46628b4eedd6609bc05a99693dbfeb 130 Gene3D G3DSA:1.10.940.10 1 129 3.5E-40 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SHYC_RS06750 cb46628b4eedd6609bc05a99693dbfeb 130 PANTHER PTHR11078 3 130 1.8E-44 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 SHYC_RS06750 cb46628b4eedd6609bc05a99693dbfeb 130 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 129 1.2E-39 T 23-04-2016 IPR011605 NusB antitermination factor GO:0006353 SHYC_RS06750 cb46628b4eedd6609bc05a99693dbfeb 130 SUPERFAMILY SSF48013 2 129 6.67E-37 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SHYC_RS06750 cb46628b4eedd6609bc05a99693dbfeb 130 Pfam PF01029 NusB family 6 128 2.0E-34 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SHYC_RS01175 c33f275d16bc951837ff5b6fc0cbe1c4 129 PANTHER PTHR37831 2 129 2.8E-48 T 23-04-2016 SHYC_RS01175 c33f275d16bc951837ff5b6fc0cbe1c4 129 Pfam PF05025 RbsD / FucU transport protein family 1 127 4.8E-42 T 23-04-2016 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 SHYC_RS01175 c33f275d16bc951837ff5b6fc0cbe1c4 129 PANTHER PTHR37831:SF1 2 129 2.8E-48 T 23-04-2016 SHYC_RS01175 c33f275d16bc951837ff5b6fc0cbe1c4 129 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 129 28.964 T 23-04-2016 IPR023064 D-ribose pyranase GO:0016872 UniPathway: UPA00916 SHYC_RS01175 c33f275d16bc951837ff5b6fc0cbe1c4 129 Gene3D G3DSA:3.40.1650.10 2 129 1.1E-26 T 23-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 SHYC_RS01175 c33f275d16bc951837ff5b6fc0cbe1c4 129 SUPERFAMILY SSF102546 1 129 2.09E-38 T 23-04-2016 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 Gene3D G3DSA:2.40.50.140 18 137 1.2E-39 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 Gene3D G3DSA:3.40.50.300 141 424 5.3E-90 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 SUPERFAMILY SSF68912 19 59 2.47E-6 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 Pfam PF07497 Rho termination factor, RNA-binding domain 63 135 1.0E-27 T 23-04-2016 IPR011113 Rho termination factor, RNA-binding GO:0003723|GO:0006353 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 SMART SM00357 64 129 3.8E-13 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 SMART SM00382 178 364 1.5E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 TIGRFAM TIGR00767 rho: transcription termination factor Rho 19 425 2.2E-184 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 PANTHER PTHR15184:SF34 50 407 5.2E-166 T 23-04-2016 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 SMART SM00959 17 59 4.7E-9 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 426 194.554 T 23-04-2016 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 SUPERFAMILY SSF52540 101 380 1.31E-63 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 167 372 5.2E-20 T 23-04-2016 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 Pfam PF07498 Rho termination factor, N-terminal domain 19 59 4.6E-11 T 23-04-2016 IPR011112 Rho termination factor, N-terminal GO:0006353 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 PANTHER PTHR15184 50 407 5.2E-166 T 23-04-2016 SHYC_RS03590 029901cd483926963be5d345d8f3c390 438 SUPERFAMILY SSF50249 62 135 3.86E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS04055 71eb500b62a49c0b833352c83e12ba12 432 SUPERFAMILY SSF53383 29 421 3.35E-53 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS04055 71eb500b62a49c0b833352c83e12ba12 432 Gene3D G3DSA:3.40.640.10 76 341 1.5E-47 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS04055 71eb500b62a49c0b833352c83e12ba12 432 Pfam PF00155 Aminotransferase class I and II 76 423 1.5E-27 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHYC_RS04055 71eb500b62a49c0b833352c83e12ba12 432 PANTHER PTHR11751 67 424 3.2E-84 T 23-04-2016 SHYC_RS04055 71eb500b62a49c0b833352c83e12ba12 432 PANTHER PTHR11751:SF370 67 424 3.2E-84 T 23-04-2016 SHYC_RS06000 8d295d2c03122621347c21480fc067a5 455 Pfam PF07261 Replication initiation and membrane attachment 319 381 1.9E-7 T 23-04-2016 IPR006343 Replication protein, DnaD/DnaB domain SHYC_RS01670 9fe14d4bba2f5f4acd4688769c6e0b86 322 Pfam PF02733 Dak1 domain 18 317 1.3E-112 T 23-04-2016 IPR004006 DhaK domain GO:0004371|GO:0006071 SHYC_RS01670 9fe14d4bba2f5f4acd4688769c6e0b86 322 SUPERFAMILY SSF82549 1 320 2.54E-112 T 23-04-2016 SHYC_RS01670 9fe14d4bba2f5f4acd4688769c6e0b86 322 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 319 7.0E-130 T 23-04-2016 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00563+2.7.-.-|UniPathway: UPA00616 SHYC_RS01670 9fe14d4bba2f5f4acd4688769c6e0b86 322 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 129 144 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHYC_RS01670 9fe14d4bba2f5f4acd4688769c6e0b86 322 Gene3D G3DSA:3.40.50.10440 12 174 2.4E-67 T 23-04-2016 SHYC_RS01670 9fe14d4bba2f5f4acd4688769c6e0b86 322 PANTHER PTHR28629 1 317 5.0E-142 T 23-04-2016 SHYC_RS01670 9fe14d4bba2f5f4acd4688769c6e0b86 322 Gene3D G3DSA:3.30.1180.20 179 320 1.6E-44 T 23-04-2016 SHYC_RS11875 892601c539a21c2df68bc2c3fdae73ee 237 PANTHER PTHR30487:SF0 6 222 1.6E-22 T 23-04-2016 SHYC_RS11875 892601c539a21c2df68bc2c3fdae73ee 237 Pfam PF01478 Type IV leader peptidase family 100 195 4.6E-9 T 23-04-2016 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 SHYC_RS11875 892601c539a21c2df68bc2c3fdae73ee 237 PANTHER PTHR30487 6 222 1.6E-22 T 23-04-2016 SHYC_RS11875 892601c539a21c2df68bc2c3fdae73ee 237 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 7 85 1.2E-16 T 23-04-2016 IPR010627 Peptidase A24A, N-terminal KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SHYC_RS07795 1ef8bb10542a263d072437bfa8c9e8b9 438 Pfam PF10460 Peptidase M30 157 376 2.3E-10 T 23-04-2016 IPR019501 Peptidase M30, hyicolysin SHYC_RS02935 d137bdae9a079532cedf0cce4efa8bc2 223 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 8 216 6.9E-73 T 23-04-2016 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 SHYC_RS02935 d137bdae9a079532cedf0cce4efa8bc2 223 Gene3D G3DSA:1.10.3720.10 6 218 5.5E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS02935 d137bdae9a079532cedf0cce4efa8bc2 223 SUPERFAMILY SSF161098 5 214 7.98E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS02935 d137bdae9a079532cedf0cce4efa8bc2 223 PANTHER PTHR30183 4 222 3.7E-68 T 23-04-2016 SHYC_RS02935 d137bdae9a079532cedf0cce4efa8bc2 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 22 207 4.7E-19 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS07820 fafe52b99a9c8bbf20d8340309c72472 114 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 112 1.0E-37 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SHYC_RS07820 fafe52b99a9c8bbf20d8340309c72472 114 SUPERFAMILY SSF89919 2 110 1.83E-35 T 23-04-2016 IPR023799 Ribosome-binding factor A domain SHYC_RS07820 fafe52b99a9c8bbf20d8340309c72472 114 ProSitePatterns PS01319 Ribosome-binding factor A signature. 73 94 - T 23-04-2016 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 SHYC_RS07820 fafe52b99a9c8bbf20d8340309c72472 114 PANTHER PTHR33515 2 114 2.8E-51 T 23-04-2016 SHYC_RS07820 fafe52b99a9c8bbf20d8340309c72472 114 Pfam PF02033 Ribosome-binding factor A 4 107 1.8E-33 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SHYC_RS07820 fafe52b99a9c8bbf20d8340309c72472 114 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 6 94 3.0E-37 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SHYC_RS07820 fafe52b99a9c8bbf20d8340309c72472 114 Gene3D G3DSA:3.30.300.20 2 114 1.4E-43 T 23-04-2016 IPR015946 K homology domain-like, alpha/beta SHYC_RS07820 fafe52b99a9c8bbf20d8340309c72472 114 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 1 114 22.324 T 23-04-2016 IPR000238 Ribosome-binding factor A GO:0006364 SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 Gene3D G3DSA:2.40.50.100 3 93 1.9E-28 T 23-04-2016 SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 SUPERFAMILY SSF51230 3 91 2.62E-26 T 23-04-2016 IPR011053 Single hybrid motif SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 Gene3D G3DSA:4.10.320.10 122 172 3.2E-21 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 Pfam PF00364 Biotin-requiring enzyme 4 76 1.4E-24 T 23-04-2016 IPR000089 Biotin/lipoyl attachment SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 PANTHER PTHR23151:SF63 3 430 1.8E-286 T 23-04-2016 SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 SUPERFAMILY SSF47005 120 166 1.83E-13 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 201 429 9.7E-89 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 Gene3D G3DSA:3.30.559.10 192 429 1.5E-93 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 Pfam PF02817 e3 binding domain 126 160 3.3E-16 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 PANTHER PTHR23151 3 430 1.8E-286 T 23-04-2016 SHYC_RS08605 b54a39faf8fef6746a05914d17ed60f3 431 SUPERFAMILY SSF52777 190 429 1.73E-87 T 23-04-2016 SHYC_RS01145 519f80eb95672371dac730b806fe0fa7 250 PANTHER PTHR30269:SF21 3 249 8.6E-96 T 23-04-2016 SHYC_RS01145 519f80eb95672371dac730b806fe0fa7 250 PANTHER PTHR30269 3 249 8.6E-96 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHYC_RS01145 519f80eb95672371dac730b806fe0fa7 250 Pfam PF01925 Sulfite exporter TauE/SafE 8 245 3.5E-40 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHYC_RS06640 0a2474a62628168618dc9e1a1087e35e 328 PANTHER PTHR18964:SF123 1 318 6.2E-75 T 23-04-2016 SHYC_RS06640 0a2474a62628168618dc9e1a1087e35e 328 PANTHER PTHR18964 1 318 6.2E-75 T 23-04-2016 SHYC_RS06640 0a2474a62628168618dc9e1a1087e35e 328 Gene3D G3DSA:3.30.420.40 3 144 1.7E-38 T 23-04-2016 SHYC_RS06640 0a2474a62628168618dc9e1a1087e35e 328 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 327 1.7E-140 T 23-04-2016 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 SHYC_RS06640 0a2474a62628168618dc9e1a1087e35e 328 Pfam PF00480 ROK family 8 320 7.1E-65 T 23-04-2016 IPR000600 ROK family SHYC_RS06640 0a2474a62628168618dc9e1a1087e35e 328 SUPERFAMILY SSF53067 5 318 1.87E-63 T 23-04-2016 SHYC_RS06640 0a2474a62628168618dc9e1a1087e35e 328 Gene3D G3DSA:3.30.420.40 145 300 7.6E-46 T 23-04-2016 SHYC_RS06640 0a2474a62628168618dc9e1a1087e35e 328 ProSitePatterns PS01125 ROK family signature. 141 168 - T 23-04-2016 IPR000600 ROK family SHYC_RS02125 fe728a0484ff97fc7e1415d610094ebc 375 Gene3D G3DSA:1.10.10.60 317 348 1.4E-6 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS02125 fe728a0484ff97fc7e1415d610094ebc 375 Pfam PF13556 PucR C-terminal helix-turn-helix domain 314 367 2.7E-18 T 23-04-2016 IPR025736 PucR C-terminal helix-turn-helix domain SHYC_RS02125 fe728a0484ff97fc7e1415d610094ebc 375 PANTHER PTHR33744:SF1 8 370 2.2E-25 T 23-04-2016 SHYC_RS02125 fe728a0484ff97fc7e1415d610094ebc 375 Pfam PF05651 Putative sugar diacid recognition 6 130 6.3E-22 T 23-04-2016 IPR008599 Putative sugar diacid recognition SHYC_RS02125 fe728a0484ff97fc7e1415d610094ebc 375 PANTHER PTHR33744 8 370 2.2E-25 T 23-04-2016 SHYC_RS09785 aa978ba789fe689a15a8c79d1d21a0a4 105 SUPERFAMILY SSF52833 4 87 1.19E-7 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09785 aa978ba789fe689a15a8c79d1d21a0a4 105 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 4 102 6.8E-32 T 23-04-2016 IPR022551 Protein of unknown function DUF2847 SHYC_RS09785 aa978ba789fe689a15a8c79d1d21a0a4 105 Gene3D G3DSA:3.40.30.10 5 85 8.1E-6 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS09785 aa978ba789fe689a15a8c79d1d21a0a4 105 Pfam PF11009 Protein of unknown function (DUF2847) 4 101 1.4E-32 T 23-04-2016 IPR022551 Protein of unknown function DUF2847 SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 SMART SM00529 24 123 6.1E-43 T 23-04-2016 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 SMART SM00899 142 214 7.3E-4 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 64 131 1.4E-24 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 1 60 1.2E-22 T 23-04-2016 IPR022687 DTXR-type HTH domain GO:0003677 SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 SUPERFAMILY SSF46785 2 62 7.02E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 Pfam PF04023 FeoA domain 142 213 2.4E-8 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 SUPERFAMILY SSF47979 63 135 5.62E-23 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 PANTHER PTHR33238 1 216 1.6E-108 T 23-04-2016 SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 Gene3D G3DSA:1.10.60.10 73 133 4.3E-27 T 23-04-2016 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 PANTHER PTHR33238:SF2 1 216 1.6E-108 T 23-04-2016 SHYC_RS10275 06aeb122f212fe6ef41fa1a026553742 216 Gene3D G3DSA:1.10.10.10 1 67 6.1E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 Gene3D G3DSA:3.30.70.790 78 149 7.3E-27 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 SUPERFAMILY SSF69737 78 143 2.88E-18 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 SUPERFAMILY SSF69287 1 75 2.49E-18 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 Gene3D G3DSA:2.60.260.20 1 75 1.2E-26 T 23-04-2016 SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 SMART SM00988 6 71 2.5E-14 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 Hamap MF_00822 Urease accessory protein UreE [ureE]. 1 149 22.934 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 PANTHER PTHR33620:SF2 64 150 2.8E-43 T 23-04-2016 SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 PANTHER PTHR33620 64 150 2.8E-43 T 23-04-2016 SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 PIRSF PIRSF036402 1 150 3.7E-47 T 23-04-2016 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 Pfam PF02814 UreE urease accessory protein, N-terminal domain 15 71 1.8E-17 T 23-04-2016 IPR004029 UreE urease accessory, N-terminal SHYC_RS11690 e858ae7bf16e4cc01ddca0e051920d89 150 Pfam PF05194 UreE urease accessory protein, C-terminal domain 78 140 7.5E-10 T 23-04-2016 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 SHYC_RS03020 871ddbf1c1d236003850c5f6629660ba 384 PANTHER PTHR11751 5 379 4.8E-161 T 23-04-2016 SHYC_RS03020 871ddbf1c1d236003850c5f6629660ba 384 PANTHER PTHR11751:SF391 5 379 4.8E-161 T 23-04-2016 SHYC_RS03020 871ddbf1c1d236003850c5f6629660ba 384 Gene3D G3DSA:3.40.640.10 42 250 2.8E-51 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS03020 871ddbf1c1d236003850c5f6629660ba 384 Gene3D G3DSA:3.90.1150.10 251 378 3.1E-34 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS03020 871ddbf1c1d236003850c5f6629660ba 384 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 229 242 - T 23-04-2016 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 Reactome: REACT_13 SHYC_RS03020 871ddbf1c1d236003850c5f6629660ba 384 Pfam PF00155 Aminotransferase class I and II 30 374 1.9E-54 T 23-04-2016 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 SHYC_RS03020 871ddbf1c1d236003850c5f6629660ba 384 SUPERFAMILY SSF53383 5 378 2.09E-87 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS08780 05b0a58ea10c63c2db91bf5b9cc895f4 363 Gene3D G3DSA:2.60.40.420 113 244 2.0E-35 T 23-04-2016 IPR008972 Cupredoxin SHYC_RS08780 05b0a58ea10c63c2db91bf5b9cc895f4 363 PANTHER PTHR22888 3 258 7.9E-119 T 23-04-2016 SHYC_RS08780 05b0a58ea10c63c2db91bf5b9cc895f4 363 SUPERFAMILY SSF81464 14 111 1.44E-20 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SHYC_RS08780 05b0a58ea10c63c2db91bf5b9cc895f4 363 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 139 215 8.3E-6 T 23-04-2016 IPR002429 Cytochrome c oxidase subunit II C-terminal GO:0004129|GO:0005507|GO:0016020 SHYC_RS08780 05b0a58ea10c63c2db91bf5b9cc895f4 363 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 28 102 1.6E-8 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SHYC_RS08780 05b0a58ea10c63c2db91bf5b9cc895f4 363 SUPERFAMILY SSF49503 113 239 6.57E-39 T 23-04-2016 IPR008972 Cupredoxin SHYC_RS08780 05b0a58ea10c63c2db91bf5b9cc895f4 363 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 9 230 6.1E-112 T 23-04-2016 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 KEGG: 00965+1.10.3.- SHYC_RS08780 05b0a58ea10c63c2db91bf5b9cc895f4 363 PANTHER PTHR22888:SF13 3 258 7.9E-119 T 23-04-2016 SHYC_RS08780 05b0a58ea10c63c2db91bf5b9cc895f4 363 Gene3D G3DSA:1.10.287.90 24 106 2.3E-24 T 23-04-2016 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 Gene3D G3DSA:3.40.50.1820 8 313 5.3E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 107 121 1.68E-5 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 63 74 1.68E-5 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 35 43 1.68E-5 T 23-04-2016 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 PANTHER PTHR10992:SF854 31 176 3.7E-26 T 23-04-2016 SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 PANTHER PTHR10992:SF854 238 314 3.7E-26 T 23-04-2016 SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 SUPERFAMILY SSF53474 26 137 3.11E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 SUPERFAMILY SSF53474 172 305 3.11E-31 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 Pfam PF12146 Serine aminopeptidase, S33 61 135 6.7E-12 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 PANTHER PTHR10992 31 176 3.7E-26 T 23-04-2016 SHYC_RS01710 4f7538ec907c41fb25614507bc719326 317 PANTHER PTHR10992 238 314 3.7E-26 T 23-04-2016 SHYC_RS07090 d9e23112c6daab1a26dbd68eea6f0b42 111 Gene3D G3DSA:1.20.5.170 43 74 2.2E-4 T 23-04-2016 SHYC_RS07090 d9e23112c6daab1a26dbd68eea6f0b42 111 PANTHER PTHR35794:SF1 2 111 3.1E-45 T 23-04-2016 SHYC_RS07090 d9e23112c6daab1a26dbd68eea6f0b42 111 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 42 2.0E-15 T 23-04-2016 IPR019933 DivIVA domain SHYC_RS07090 d9e23112c6daab1a26dbd68eea6f0b42 111 PANTHER PTHR35794 2 111 3.1E-45 T 23-04-2016 SHYC_RS07090 d9e23112c6daab1a26dbd68eea6f0b42 111 Pfam PF05103 DivIVA protein 8 70 1.1E-12 T 23-04-2016 IPR007793 DivIVA family SHYC_RS07090 d9e23112c6daab1a26dbd68eea6f0b42 111 PIRSF PIRSF029938 1 111 4.6E-37 T 23-04-2016 IPR011229 Cell cycle protein GpsB SHYC_RS09215 28ad297c5884576c9074603f4eaab859 173 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 8 164 4.4E-28 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS09215 28ad297c5884576c9074603f4eaab859 173 PANTHER PTHR12383:SF14 1 169 1.8E-16 T 23-04-2016 SHYC_RS09215 28ad297c5884576c9074603f4eaab859 173 SUPERFAMILY SSF51306 24 168 2.59E-22 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SHYC_RS09215 28ad297c5884576c9074603f4eaab859 173 Pfam PF00717 Peptidase S24-like 38 95 1.1E-4 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B SHYC_RS09215 28ad297c5884576c9074603f4eaab859 173 PANTHER PTHR12383 1 169 1.8E-16 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS09215 28ad297c5884576c9074603f4eaab859 173 Gene3D G3DSA:2.10.109.10 23 83 3.1E-16 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SHYC_RS09215 28ad297c5884576c9074603f4eaab859 173 Gene3D G3DSA:2.10.109.10 125 168 3.1E-16 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SHYC_RS03240 51f4dd38fd640234e10ef1c474368a07 253 SUPERFAMILY SSF53335 14 251 5.37E-41 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS03240 51f4dd38fd640234e10ef1c474368a07 253 PANTHER PTHR10108 12 208 2.0E-41 T 23-04-2016 SHYC_RS03240 51f4dd38fd640234e10ef1c474368a07 253 Pfam PF13649 Methyltransferase domain 41 138 1.6E-17 T 23-04-2016 SHYC_RS03240 51f4dd38fd640234e10ef1c474368a07 253 PANTHER PTHR10108:SF805 12 208 2.0E-41 T 23-04-2016 SHYC_RS03240 51f4dd38fd640234e10ef1c474368a07 253 Gene3D G3DSA:3.40.50.150 21 251 3.3E-42 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS10525 ff2e8784e0ee7c072d066781eb34c680 452 ProSitePatterns PS00455 Putative AMP-binding domain signature. 124 135 - T 23-04-2016 IPR020845 AMP-binding, conserved site SHYC_RS10525 ff2e8784e0ee7c072d066781eb34c680 452 Gene3D G3DSA:2.30.38.10 287 339 1.0E-4 T 23-04-2016 SHYC_RS10525 ff2e8784e0ee7c072d066781eb34c680 452 PANTHER PTHR24095 1 447 2.5E-42 T 23-04-2016 SHYC_RS10525 ff2e8784e0ee7c072d066781eb34c680 452 Gene3D G3DSA:3.40.50.980 134 286 6.8E-18 T 23-04-2016 SHYC_RS10525 ff2e8784e0ee7c072d066781eb34c680 452 Gene3D G3DSA:3.30.300.30 349 445 2.1E-17 T 23-04-2016 SHYC_RS10525 ff2e8784e0ee7c072d066781eb34c680 452 Gene3D G3DSA:3.40.50.980 4 133 1.1E-16 T 23-04-2016 SHYC_RS10525 ff2e8784e0ee7c072d066781eb34c680 452 SUPERFAMILY SSF56801 4 446 4.97E-71 T 23-04-2016 SHYC_RS10525 ff2e8784e0ee7c072d066781eb34c680 452 Pfam PF00501 AMP-binding enzyme 121 353 2.2E-28 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHYC_RS10525 ff2e8784e0ee7c072d066781eb34c680 452 Pfam PF00501 AMP-binding enzyme 10 102 2.5E-6 T 23-04-2016 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 SHYC_RS10525 ff2e8784e0ee7c072d066781eb34c680 452 PANTHER PTHR24095:SF181 1 447 2.5E-42 T 23-04-2016 SHYC_RS07585 555993b535326465357399633f1d701f 197 PANTHER PTHR24220 3 194 1.3E-38 T 23-04-2016 SHYC_RS07585 555993b535326465357399633f1d701f 197 Pfam PF00005 ABC transporter 18 145 2.7E-21 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS07585 555993b535326465357399633f1d701f 197 Gene3D G3DSA:3.40.50.300 4 194 5.7E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07585 555993b535326465357399633f1d701f 197 SUPERFAMILY SSF52540 2 195 1.26E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07585 555993b535326465357399633f1d701f 197 SMART SM00382 26 192 3.2E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS01630 fae6752e2fef50ab4d6e560eebc7ecaf 191 Gene3D G3DSA:3.30.230.40 87 190 2.7E-31 T 23-04-2016 SHYC_RS01630 fae6752e2fef50ab4d6e560eebc7ecaf 191 PANTHER PTHR23133 4 191 2.4E-83 T 23-04-2016 SHYC_RS01630 fae6752e2fef50ab4d6e560eebc7ecaf 191 SUPERFAMILY SSF54211 2 82 3.79E-25 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS01630 fae6752e2fef50ab4d6e560eebc7ecaf 191 Gene3D G3DSA:3.30.230.40 3 83 1.2E-27 T 23-04-2016 SHYC_RS01630 fae6752e2fef50ab4d6e560eebc7ecaf 191 PANTHER PTHR23133:SF2 4 191 2.4E-83 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SHYC_RS01630 fae6752e2fef50ab4d6e560eebc7ecaf 191 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 28 170 2.9E-60 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SHYC_RS01630 fae6752e2fef50ab4d6e560eebc7ecaf 191 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 58 71 - T 23-04-2016 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SHYC_RS01630 fae6752e2fef50ab4d6e560eebc7ecaf 191 SUPERFAMILY SSF54211 85 175 7.28E-33 T 23-04-2016 IPR020568 Ribosomal protein S5 domain 2-type fold SHYC_RS01630 fae6752e2fef50ab4d6e560eebc7ecaf 191 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 1 190 36.924 T 23-04-2016 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19|UniPathway: UPA00031 SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 376 7.8E-116 T 23-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 SUPERFAMILY SSF51338 352 380 1.62E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 SUPERFAMILY SSF51338 3 54 1.62E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 PANTHER PTHR11113:SF7 4 378 1.2E-150 T 23-04-2016 SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 Gene3D G3DSA:2.30.40.10 333 373 1.6E-6 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 Pfam PF01979 Amidohydrolase family 52 378 5.4E-22 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 PANTHER PTHR11113 4 378 1.2E-150 T 23-04-2016 SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 SUPERFAMILY SSF51556 55 352 4.21E-95 T 23-04-2016 IPR032466 Metal-dependent hydrolase SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 Gene3D G3DSA:2.30.40.10 3 56 1.1E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 PIRSF PIRSF038994 3 384 1.8E-127 T 23-04-2016 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395 SHYC_RS04605 c121f661c4bcd6624578c3f3e507868f 389 Gene3D G3DSA:3.20.20.140 57 332 1.2E-101 T 23-04-2016 SHYC_RS09265 9c773694e51339801154eda84b691b68 201 PANTHER PTHR11071 19 118 2.4E-89 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SHYC_RS09265 9c773694e51339801154eda84b691b68 201 PANTHER PTHR11071 144 195 2.4E-89 T 23-04-2016 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755|GO:0006457 SHYC_RS09265 9c773694e51339801154eda84b691b68 201 SUPERFAMILY SSF50891 148 195 5.26E-58 T 23-04-2016 IPR029000 Cyclophilin-like domain SHYC_RS09265 9c773694e51339801154eda84b691b68 201 SUPERFAMILY SSF50891 18 119 5.26E-58 T 23-04-2016 IPR029000 Cyclophilin-like domain SHYC_RS09265 9c773694e51339801154eda84b691b68 201 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 19 193 1.2E-45 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHYC_RS09265 9c773694e51339801154eda84b691b68 201 Gene3D G3DSA:2.40.100.10 9 197 2.6E-65 T 23-04-2016 IPR029000 Cyclophilin-like domain SHYC_RS09265 9c773694e51339801154eda84b691b68 201 PANTHER PTHR11071:SF282 19 118 2.4E-89 T 23-04-2016 SHYC_RS09265 9c773694e51339801154eda84b691b68 201 PANTHER PTHR11071:SF282 144 195 2.4E-89 T 23-04-2016 SHYC_RS09265 9c773694e51339801154eda84b691b68 201 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 31 46 1.1E-19 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHYC_RS09265 9c773694e51339801154eda84b691b68 201 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 114 1.1E-19 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHYC_RS09265 9c773694e51339801154eda84b691b68 201 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 57 69 1.1E-19 T 23-04-2016 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 SHYC_RS09075 6b484fdf03d14f6383511aa31d1daa53 214 SUPERFAMILY SSF81301 3 199 1.13E-58 T 23-04-2016 SHYC_RS09075 6b484fdf03d14f6383511aa31d1daa53 214 Pfam PF04607 Region found in RelA / SpoT proteins 43 162 3.5E-37 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 SHYC_RS09075 6b484fdf03d14f6383511aa31d1daa53 214 PANTHER PTHR21262:SF11 2 206 4.2E-128 T 23-04-2016 SHYC_RS09075 6b484fdf03d14f6383511aa31d1daa53 214 PANTHER PTHR21262 2 206 4.2E-128 T 23-04-2016 SHYC_RS09075 6b484fdf03d14f6383511aa31d1daa53 214 Gene3D G3DSA:1.10.287.860 147 200 7.5E-25 T 23-04-2016 SHYC_RS09075 6b484fdf03d14f6383511aa31d1daa53 214 SMART SM00954 43 164 2.1E-41 T 23-04-2016 IPR007685 RelA/SpoT GO:0015969 SHYC_RS09075 6b484fdf03d14f6383511aa31d1daa53 214 Gene3D G3DSA:3.30.460.10 4 144 4.8E-39 T 23-04-2016 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 SMART SM00738 7 118 5.3E-48 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 Gene3D G3DSA:3.30.70.940 8 119 7.7E-47 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 165 174 - T 23-04-2016 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 10 182 2.5E-60 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 Pfam PF02357 Transcription termination factor nusG 8 114 5.3E-27 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 7 182 26.954 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 Pfam PF00467 KOW motif 132 164 4.2E-6 T 23-04-2016 IPR005824 KOW SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 SMART SM00739 128 155 3.0E-4 T 23-04-2016 IPR005824 KOW SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 PANTHER PTHR30265 7 182 3.0E-75 T 23-04-2016 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 SUPERFAMILY SSF50104 126 182 7.02E-18 T 23-04-2016 IPR008991 Translation protein SH3-like domain SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 Gene3D G3DSA:2.30.30.30 121 182 3.1E-25 T 23-04-2016 IPR014722 Ribosomal protein L2 domain 2 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 SUPERFAMILY SSF82679 8 119 7.85E-39 T 23-04-2016 IPR006645 NusG, N-terminal GO:0006355 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 PRINTS PR00338 Transcription termination factor NUSG signature 62 74 2.2E-17 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 PRINTS PR00338 Transcription termination factor NUSG signature 158 174 2.2E-17 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHYC_RS10690 0d5a883efca558929b60d849fcf0fb5f 182 PRINTS PR00338 Transcription termination factor NUSG signature 140 155 2.2E-17 T 23-04-2016 IPR001062 Transcription antitermination protein, NusG GO:0032784 SHYC_RS06015 0b00d5b2c8b158cf9262d0f3d458646b 502 PANTHER PTHR11785 7 499 1.6E-203 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS06015 0b00d5b2c8b158cf9262d0f3d458646b 502 PANTHER PTHR11785:SF204 7 499 1.6E-203 T 23-04-2016 SHYC_RS06015 0b00d5b2c8b158cf9262d0f3d458646b 502 Pfam PF00324 Amino acid permease 20 477 7.6E-135 T 23-04-2016 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 SHYC_RS06015 0b00d5b2c8b158cf9262d0f3d458646b 502 ProSitePatterns PS00218 Amino acid permeases signature. 45 76 - T 23-04-2016 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 SHYC_RS06015 0b00d5b2c8b158cf9262d0f3d458646b 502 PIRSF PIRSF006060 1 499 3.8E-82 T 23-04-2016 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 SHYC_RS08830 04f648b16f92e639811382b71cd41a02 852 SUPERFAMILY SSF53448 531 808 7.41E-31 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS08830 04f648b16f92e639811382b71cd41a02 852 PANTHER PTHR22916 533 808 7.9E-29 T 23-04-2016 SHYC_RS08830 04f648b16f92e639811382b71cd41a02 852 Pfam PF00535 Glycosyl transferase family 2 540 695 3.5E-18 T 23-04-2016 IPR001173 Glycosyltransferase 2-like SHYC_RS08830 04f648b16f92e639811382b71cd41a02 852 Gene3D G3DSA:3.90.550.10 535 743 1.3E-32 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS10060 e121db2438f3f27db77094713970e601 183 Gene3D G3DSA:3.40.630.30 2 172 9.1E-36 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10060 e121db2438f3f27db77094713970e601 183 Pfam PF13302 Acetyltransferase (GNAT) domain 9 153 1.1E-24 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS10060 e121db2438f3f27db77094713970e601 183 SUPERFAMILY SSF55729 2 160 4.16E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10060 e121db2438f3f27db77094713970e601 183 PANTHER PTHR13256 1 153 1.7E-51 T 23-04-2016 SHYC_RS10060 e121db2438f3f27db77094713970e601 183 PANTHER PTHR13256:SF32 1 153 1.7E-51 T 23-04-2016 SHYC_RS09260 c218bcef7df7f2b7793457f8e60f8706 85 ProDom PD062625 YUGE 9 80 1.0E-4 T 23-04-2016 IPR015053 Protein of unknown function DUF1871 SHYC_RS09260 c218bcef7df7f2b7793457f8e60f8706 85 Pfam PF08958 Domain of unknown function (DUF1871) 10 82 9.4E-13 T 23-04-2016 IPR015053 Protein of unknown function DUF1871 SHYC_RS09260 c218bcef7df7f2b7793457f8e60f8706 85 Gene3D G3DSA:1.10.340.20 2 84 1.5E-24 T 23-04-2016 IPR023162 Apc36109-like domain SHYC_RS09260 c218bcef7df7f2b7793457f8e60f8706 85 SUPERFAMILY SSF116922 5 82 7.19E-11 T 23-04-2016 IPR023162 Apc36109-like domain SHYC_RS09875 178bb169442fc3b9499082851edc2a5b 271 Pfam PF02535 ZIP Zinc transporter 106 266 8.8E-15 T 23-04-2016 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 SHYC_RS09875 178bb169442fc3b9499082851edc2a5b 271 PANTHER PTHR11040:SF33 1 271 4.3E-109 T 23-04-2016 SHYC_RS09875 178bb169442fc3b9499082851edc2a5b 271 PANTHER PTHR11040 1 271 4.3E-109 T 23-04-2016 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 Gene3D G3DSA:3.10.150.10 1 129 7.8E-30 T 23-04-2016 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 SUPERFAMILY SSF55979 135 250 9.43E-28 T 23-04-2016 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 253 374 4.8E-36 T 23-04-2016 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 SUPERFAMILY SSF55979 253 375 1.2E-31 T 23-04-2016 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 SUPERFAMILY SSF55979 1 128 2.17E-23 T 23-04-2016 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 Pfam PF02767 DNA polymerase III beta subunit, central domain 136 250 4.0E-41 T 23-04-2016 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 Gene3D G3DSA:3.10.150.10 256 375 1.4E-33 T 23-04-2016 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 PIRSF PIRSF000804 1 376 8.7E-110 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 Gene3D G3DSA:3.10.150.10 131 254 6.1E-37 T 23-04-2016 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 2.7E-39 T 23-04-2016 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 SMART SM00480 17 371 4.8E-175 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 375 2.2E-112 T 23-04-2016 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS00010 994768228b35d07417dad8c7938aaef6 376 PANTHER PTHR30478 2 376 5.8E-133 T 23-04-2016 SHYC_RS05700 6246983be8f3246b3e8af9c41c4db19c 221 Gene3D G3DSA:3.40.50.150 42 137 1.1E-8 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05700 6246983be8f3246b3e8af9c41c4db19c 221 Pfam PF02390 Putative methyltransferase 38 206 3.0E-49 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SHYC_RS05700 6246983be8f3246b3e8af9c41c4db19c 221 PANTHER PTHR23417:SF14 1 209 2.2E-59 T 23-04-2016 SHYC_RS05700 6246983be8f3246b3e8af9c41c4db19c 221 SUPERFAMILY SSF53335 32 207 3.09E-27 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05700 6246983be8f3246b3e8af9c41c4db19c 221 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 28 208 5.4E-53 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SHYC_RS05700 6246983be8f3246b3e8af9c41c4db19c 221 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 211 28.898 T 23-04-2016 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 UniPathway: UPA00989 SHYC_RS05700 6246983be8f3246b3e8af9c41c4db19c 221 PANTHER PTHR23417 1 209 2.2E-59 T 23-04-2016 SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 SUPERFAMILY SSF53850 92 282 1.35E-14 T 23-04-2016 SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 SUPERFAMILY SSF46785 2 83 7.5E-23 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.5E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 PANTHER PTHR30346 1 288 1.7E-46 T 23-04-2016 SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 Pfam PF03466 LysR substrate binding domain 90 276 5.0E-13 T 23-04-2016 IPR005119 LysR, substrate-binding SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 Gene3D G3DSA:1.10.10.10 2 79 2.2E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.2E-20 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 PANTHER PTHR30346:SF15 1 288 1.7E-46 T 23-04-2016 SHYC_RS11140 0f49d11b9169aebbabefd05d59c69c8f 292 Gene3D G3DSA:3.40.190.10 90 192 3.5E-10 T 23-04-2016 SHYC_RS03740 ef1cd7464647168afbba8cf0f010e8fc 212 Gene3D G3DSA:3.20.20.70 3 211 2.1E-61 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS03740 ef1cd7464647168afbba8cf0f010e8fc 212 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 205 4.1E-59 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03740 ef1cd7464647168afbba8cf0f010e8fc 212 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 212 25.402 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03740 ef1cd7464647168afbba8cf0f010e8fc 212 Pfam PF02581 Thiamine monophosphate synthase/TENI 10 194 6.7E-55 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03740 ef1cd7464647168afbba8cf0f010e8fc 212 PANTHER PTHR20857:SF20 1 212 7.9E-83 T 23-04-2016 SHYC_RS03740 ef1cd7464647168afbba8cf0f010e8fc 212 SUPERFAMILY SSF51391 7 210 1.96E-60 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS03740 ef1cd7464647168afbba8cf0f010e8fc 212 PANTHER PTHR20857 1 212 7.9E-83 T 23-04-2016 SHYC_RS02920 a705937ef19c9d2c3823227c2e7fa15f 251 Gene3D G3DSA:3.40.630.30 116 240 1.5E-13 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS02920 a705937ef19c9d2c3823227c2e7fa15f 251 Pfam PF13673 Acetyltransferase (GNAT) domain 150 238 8.0E-11 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS02920 a705937ef19c9d2c3823227c2e7fa15f 251 SUPERFAMILY SSF55729 114 241 3.16E-15 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 SUPERFAMILY SSF49478 432 528 1.08E-14 T 23-04-2016 SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 Gene3D G3DSA:2.60.40.10 338 396 6.7E-4 T 23-04-2016 IPR013783 Immunoglobulin-like fold SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 Gene3D G3DSA:2.60.40.740 171 314 1.1E-30 T 23-04-2016 IPR008456 Collagen binding domain GO:0005518 SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 SUPERFAMILY SSF49401 31 159 6.71E-16 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 SUPERFAMILY SSF49401 170 316 3.23E-28 T 23-04-2016 IPR008966 Adhesion domain SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 SUPERFAMILY SSF49478 624 712 3.34E-29 T 23-04-2016 SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 SUPERFAMILY SSF49478 338 401 1.18E-5 T 23-04-2016 SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 Pfam PF05738 Cna protein B-type domain 346 407 9.1E-13 T 23-04-2016 IPR008454 Collagen-binding surface protein Cna-like, B-type domain SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 SUPERFAMILY SSF49478 534 621 2.55E-28 T 23-04-2016 SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 Gene3D G3DSA:2.60.40.1140 533 627 3.4E-33 T 23-04-2016 IPR008970 Collagen-binding surface protein Cna, B-type domain SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 Gene3D G3DSA:2.60.40.1140 628 719 1.1E-32 T 23-04-2016 IPR008970 Collagen-binding surface protein Cna, B-type domain SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 Gene3D G3DSA:2.60.40.1140 432 531 1.2E-12 T 23-04-2016 IPR008970 Collagen-binding surface protein Cna, B-type domain SHYC_RS11880 0813b51e161940ed43cae657dd7b3c2e 720 Pfam PF05737 Collagen binding domain 174 296 2.5E-12 T 23-04-2016 IPR008456 Collagen binding domain GO:0005518 SHYC_RS06675 caaef19eca9a1ee36b1bf240939578eb 160 Pfam PF13544 Type IV pilin N-term methylation site GFxxxE 23 46 3.6E-6 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site SHYC_RS06675 caaef19eca9a1ee36b1bf240939578eb 160 Pfam PF15980 Putative Competence protein ComGF 72 151 2.2E-9 T 23-04-2016 IPR016977 Competence operon G, ComGF SHYC_RS06675 caaef19eca9a1ee36b1bf240939578eb 160 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 26 46 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site SHYC_RS10425 2ee10ab40d07a553eee5a42898da9bf6 514 PANTHER PTHR10283 18 505 1.5E-180 T 23-04-2016 SHYC_RS10425 2ee10ab40d07a553eee5a42898da9bf6 514 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 47 496 2.4E-87 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SHYC_RS10425 2ee10ab40d07a553eee5a42898da9bf6 514 PANTHER PTHR10283:SF82 18 505 1.5E-180 T 23-04-2016 SHYC_RS10425 2ee10ab40d07a553eee5a42898da9bf6 514 Pfam PF00939 Sodium:sulfate symporter transmembrane region 27 494 4.7E-90 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SHYC_RS08505 08a1bbc556cda307414c7a5952aeefcc 302 PANTHER PTHR35457:SF1 3 296 8.9E-66 T 23-04-2016 SHYC_RS08505 08a1bbc556cda307414c7a5952aeefcc 302 Pfam PF02628 Cytochrome oxidase assembly protein 56 286 1.5E-32 T 23-04-2016 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 UniPathway: UPA00269 SHYC_RS08505 08a1bbc556cda307414c7a5952aeefcc 302 PANTHER PTHR35457 3 296 8.9E-66 T 23-04-2016 SHYC_RS08505 08a1bbc556cda307414c7a5952aeefcc 302 Hamap MF_01664 Heme A synthase [ctaA]. 3 302 27.429 T 23-04-2016 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 UniPathway: UPA00269 SHYC_RS02930 0c5657752213b297b72ac8143986de44 252 Pfam PF13531 Bacterial extracellular solute-binding protein 34 250 6.6E-38 T 23-04-2016 SHYC_RS02930 0c5657752213b297b72ac8143986de44 252 Gene3D G3DSA:3.40.190.10 124 200 1.2E-27 T 23-04-2016 SHYC_RS02930 0c5657752213b297b72ac8143986de44 252 PIRSF PIRSF004846 1 252 3.0E-75 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SHYC_RS02930 0c5657752213b297b72ac8143986de44 252 PANTHER PTHR30632 1 251 5.3E-50 T 23-04-2016 SHYC_RS02930 0c5657752213b297b72ac8143986de44 252 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 39 248 5.2E-53 T 23-04-2016 IPR005950 Molybdenum ABC transporter, periplasmic binding protein GO:0015412|GO:0015689|GO:0030288 SHYC_RS02930 0c5657752213b297b72ac8143986de44 252 Gene3D G3DSA:3.40.190.10 1 123 3.8E-20 T 23-04-2016 SHYC_RS02930 0c5657752213b297b72ac8143986de44 252 Gene3D G3DSA:3.40.190.10 217 248 3.8E-20 T 23-04-2016 SHYC_RS02930 0c5657752213b297b72ac8143986de44 252 PANTHER PTHR30632:SF0 1 251 5.3E-50 T 23-04-2016 SHYC_RS02930 0c5657752213b297b72ac8143986de44 252 SUPERFAMILY SSF53850 34 251 2.46E-52 T 23-04-2016 SHYC_RS02205 d84b559b6ee7f2180a0d5d497de674f4 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 117 2.8E-8 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SHYC_RS02205 d84b559b6ee7f2180a0d5d497de674f4 123 PANTHER PTHR36437 1 121 1.5E-37 T 23-04-2016 SHYC_RS02205 d84b559b6ee7f2180a0d5d497de674f4 123 PANTHER PTHR36437:SF2 1 121 1.5E-37 T 23-04-2016 SHYC_RS02205 d84b559b6ee7f2180a0d5d497de674f4 123 Gene3D G3DSA:3.10.180.10 8 117 4.9E-13 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS02205 d84b559b6ee7f2180a0d5d497de674f4 123 SUPERFAMILY SSF54593 1 120 1.09E-17 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS04345 922aa5e622878105c5abaa5312f0ab67 377 Gene3D G3DSA:3.20.20.70 33 344 6.6E-26 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS04345 922aa5e622878105c5abaa5312f0ab67 377 PANTHER PTHR11228:SF22 4 374 3.6E-117 T 23-04-2016 SHYC_RS04345 922aa5e622878105c5abaa5312f0ab67 377 PANTHER PTHR11228 4 374 3.6E-117 T 23-04-2016 SHYC_RS04345 922aa5e622878105c5abaa5312f0ab67 377 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 8 370 1.1E-185 T 23-04-2016 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB SHYC_RS04345 922aa5e622878105c5abaa5312f0ab67 377 Pfam PF08756 YfkB-like domain 220 370 6.2E-76 T 23-04-2016 IPR014866 YfkB-like domain SHYC_RS04345 922aa5e622878105c5abaa5312f0ab67 377 SUPERFAMILY SSF102114 33 260 3.92E-25 T 23-04-2016 SHYC_RS04345 922aa5e622878105c5abaa5312f0ab67 377 Pfam PF13394 4Fe-4S single cluster domain 35 136 8.2E-6 T 23-04-2016 SHYC_RS04345 922aa5e622878105c5abaa5312f0ab67 377 Pfam PF04055 Radical SAM superfamily 36 187 5.1E-11 T 23-04-2016 IPR007197 Radical SAM GO:0003824|GO:0051536 SHYC_RS04260 4101ef1069bdea2ef1389225089cbeba 186 PANTHER PTHR30231 6 170 1.4E-59 T 23-04-2016 SHYC_RS04260 4101ef1069bdea2ef1389225089cbeba 186 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 161 1.8E-21 T 23-04-2016 IPR006054 DNA polymerase III, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS04260 4101ef1069bdea2ef1389225089cbeba 186 Gene3D G3DSA:3.30.420.10 3 168 1.8E-47 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS04260 4101ef1069bdea2ef1389225089cbeba 186 Pfam PF00929 Exonuclease 7 158 7.0E-23 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHYC_RS04260 4101ef1069bdea2ef1389225089cbeba 186 PANTHER PTHR30231:SF10 6 170 1.4E-59 T 23-04-2016 SHYC_RS04260 4101ef1069bdea2ef1389225089cbeba 186 SUPERFAMILY SSF53098 3 169 8.93E-43 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS04260 4101ef1069bdea2ef1389225089cbeba 186 SMART SM00479 5 168 2.8E-23 T 23-04-2016 IPR013520 Exonuclease, RNase T/DNA polymerase III SHYC_RS06540 45b9d05ab7be5fb385f2ab8afe3a9dc5 227 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 20 218 1.8E-69 T 23-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 SHYC_RS06540 45b9d05ab7be5fb385f2ab8afe3a9dc5 227 PANTHER PTHR38451 1 226 6.2E-74 T 23-04-2016 SHYC_RS06540 45b9d05ab7be5fb385f2ab8afe3a9dc5 227 Gene3D G3DSA:3.40.50.150 9 149 3.6E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS06540 45b9d05ab7be5fb385f2ab8afe3a9dc5 227 SUPERFAMILY SSF53335 6 161 3.77E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS06540 45b9d05ab7be5fb385f2ab8afe3a9dc5 227 PIRSF PIRSF018637 2 226 8.2E-72 T 23-04-2016 IPR006901 tRNA methyltransferase TrmK GO:0016429 SHYC_RS02320 fc23f79e954124ea54daaedd150b10a9 343 PANTHER PTHR40063 2 329 3.9E-81 T 23-04-2016 SHYC_RS02320 fc23f79e954124ea54daaedd150b10a9 343 Pfam PF13303 Phosphotransferase system, EIIC 31 328 3.0E-44 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.2E-81 T 23-04-2016 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 SUPERFAMILY SSF52540 1 213 6.27E-47 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 Pfam PF05191 Adenylate kinase, active site lid 127 162 1.0E-15 T 23-04-2016 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 Hamap MF_00235 Adenylate kinase [adk]. 1 213 52.539 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 Gene3D G3DSA:3.40.50.300 1 211 4.5E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 PRINTS PR00094 Adenylate kinase signature 81 97 6.4E-33 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 PRINTS PR00094 Adenylate kinase signature 4 17 6.4E-33 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 PRINTS PR00094 Adenylate kinase signature 160 175 6.4E-33 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 PRINTS PR00094 Adenylate kinase signature 32 46 6.4E-33 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 PRINTS PR00094 Adenylate kinase signature 177 191 6.4E-33 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 Pfam PF00406 Adenylate kinase 5 190 2.2E-60 T 23-04-2016 SHYC_RS03165 24999a5792168d2cb3b14f2d249f466e 216 PANTHER PTHR23359 1 215 3.6E-106 T 23-04-2016 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|MetaCyc: PWY-7219|UniPathway: UPA00588 SHYC_RS01425 09aa219074b133954111af9f69e7fe3a 452 PRINTS PR00175 Sodium/alanine symporter signature 306 324 6.5E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS01425 09aa219074b133954111af9f69e7fe3a 452 PRINTS PR00175 Sodium/alanine symporter signature 353 375 6.5E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS01425 09aa219074b133954111af9f69e7fe3a 452 PRINTS PR00175 Sodium/alanine symporter signature 412 432 6.5E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS01425 09aa219074b133954111af9f69e7fe3a 452 PRINTS PR00175 Sodium/alanine symporter signature 211 230 6.5E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS01425 09aa219074b133954111af9f69e7fe3a 452 PRINTS PR00175 Sodium/alanine symporter signature 183 201 6.5E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS01425 09aa219074b133954111af9f69e7fe3a 452 PRINTS PR00175 Sodium/alanine symporter signature 89 111 6.5E-51 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS01425 09aa219074b133954111af9f69e7fe3a 452 TIGRFAM TIGR00835 agcS: amino acid carrier protein 12 443 3.5E-131 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS01425 09aa219074b133954111af9f69e7fe3a 452 Pfam PF01235 Sodium:alanine symporter family 52 450 5.8E-125 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS01425 09aa219074b133954111af9f69e7fe3a 452 PANTHER PTHR30330:SF3 1 448 1.3E-179 T 23-04-2016 SHYC_RS01425 09aa219074b133954111af9f69e7fe3a 452 PANTHER PTHR30330 1 448 1.3E-179 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS01190 e1deaf7b2d474de879029553e2a73bfe 305 Gene3D G3DSA:3.40.50.2300 151 299 2.3E-51 T 23-04-2016 SHYC_RS01190 e1deaf7b2d474de879029553e2a73bfe 305 SUPERFAMILY SSF53822 34 302 1.35E-86 T 23-04-2016 IPR028082 Periplasmic binding protein-like I SHYC_RS01190 e1deaf7b2d474de879029553e2a73bfe 305 PANTHER PTHR32196 4 300 6.9E-91 T 23-04-2016 SHYC_RS01190 e1deaf7b2d474de879029553e2a73bfe 305 PANTHER PTHR32196:SF9 4 300 6.9E-91 T 23-04-2016 SHYC_RS01190 e1deaf7b2d474de879029553e2a73bfe 305 Gene3D G3DSA:3.40.50.2300 40 150 3.2E-41 T 23-04-2016 SHYC_RS01190 e1deaf7b2d474de879029553e2a73bfe 305 Pfam PF13407 Periplasmic binding protein domain 41 289 1.5E-63 T 23-04-2016 IPR025997 Periplasmic binding protein SHYC_RS00075 7e74ac157c6a18ec8ebc474589821bf2 84 Pfam PF05120 Gas vesicle protein G 7 76 8.8E-19 T 23-04-2016 IPR007804 Gas vesicle protein GvpG SHYC_RS00455 2fdaee77f4e42c7a8ed505642a543e19 177 PANTHER PTHR30352:SF2 1 176 6.3E-72 T 23-04-2016 SHYC_RS00455 2fdaee77f4e42c7a8ed505642a543e19 177 PANTHER PTHR30352 1 176 6.3E-72 T 23-04-2016 SHYC_RS00455 2fdaee77f4e42c7a8ed505642a543e19 177 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 13 163 1.2E-44 T 23-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- SHYC_RS00455 2fdaee77f4e42c7a8ed505642a543e19 177 Gene3D G3DSA:3.20.20.70 28 106 1.2E-6 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS00455 2fdaee77f4e42c7a8ed505642a543e19 177 Pfam PF13353 4Fe-4S single cluster domain 22 161 1.0E-40 T 23-04-2016 SHYC_RS00455 2fdaee77f4e42c7a8ed505642a543e19 177 SUPERFAMILY SSF102114 34 106 2.22E-7 T 23-04-2016 SHYC_RS00455 2fdaee77f4e42c7a8ed505642a543e19 177 PIRSF PIRSF000368 4 177 7.4E-57 T 23-04-2016 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 KEGG: 00351+1.97.1.-|KEGG: 00361+1.97.1.-|KEGG: 00363+1.97.1.-|KEGG: 00625+1.97.1.- SHYC_RS00370 e6a76280e0aa0319d2cd42de1e9b76ec 589 Pfam PF04183 IucA / IucC family 132 379 2.2E-71 T 23-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 SHYC_RS00370 e6a76280e0aa0319d2cd42de1e9b76ec 589 PANTHER PTHR34384:SF5 6 588 4.2E-182 T 23-04-2016 SHYC_RS00370 e6a76280e0aa0319d2cd42de1e9b76ec 589 Pfam PF06276 Ferric iron reductase FhuF-like transporter 400 571 5.7E-35 T 23-04-2016 IPR022770 Ferric iron reductase FhuF domain SHYC_RS00370 e6a76280e0aa0319d2cd42de1e9b76ec 589 PANTHER PTHR34384 6 588 4.2E-182 T 23-04-2016 SHYC_RS09270 5cccab7d1ed8c9fe7f1ae3949bfb252e 126 Pfam PF08810 Kinase associated protein B 7 117 2.4E-40 T 23-04-2016 IPR014916 Kinase associated protein B SHYC_RS09270 5cccab7d1ed8c9fe7f1ae3949bfb252e 126 SUPERFAMILY SSF141251 2 117 1.28E-43 T 23-04-2016 SHYC_RS09270 5cccab7d1ed8c9fe7f1ae3949bfb252e 126 SMART SM01298 7 119 3.3E-62 T 23-04-2016 IPR014916 Kinase associated protein B SHYC_RS04365 80a628b0dbb9978340ed6187eaa63bd0 268 Gene3D G3DSA:1.10.3810.10 75 264 1.6E-63 T 23-04-2016 SHYC_RS04365 80a628b0dbb9978340ed6187eaa63bd0 268 Pfam PF00912 Transglycosylase 75 249 7.3E-53 T 23-04-2016 IPR001264 Glycosyl transferase, family 51 UniPathway: UPA00219 SHYC_RS04365 80a628b0dbb9978340ed6187eaa63bd0 268 PANTHER PTHR32282 74 265 3.6E-59 T 23-04-2016 SHYC_RS04365 80a628b0dbb9978340ed6187eaa63bd0 268 SUPERFAMILY SSF53955 74 264 1.72E-56 T 23-04-2016 IPR023346 Lysozyme-like domain SHYC_RS09105 1a34feeaa515dbedda2e3771dba0def1 322 Pfam PF06054 Competence protein CoiA-like family 18 276 3.6E-27 T 23-04-2016 IPR010330 Competence-induced protein CoiA-like SHYC_RS09105 1a34feeaa515dbedda2e3771dba0def1 322 PANTHER PTHR41265:SF1 1 274 3.1E-36 T 23-04-2016 SHYC_RS09105 1a34feeaa515dbedda2e3771dba0def1 322 PANTHER PTHR41265 1 274 3.1E-36 T 23-04-2016 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 SUPERFAMILY SSF82866 219 413 3.92E-39 T 23-04-2016 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 PANTHER PTHR30081 3 117 1.6E-102 T 23-04-2016 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 Pfam PF07549 SecD/SecF GG Motif 32 49 0.082 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 Pfam PF07549 SecD/SecF GG Motif 473 499 4.7E-7 T 23-04-2016 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 451 735 25.762 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 PANTHER PTHR30081 455 755 1.6E-102 T 23-04-2016 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 PANTHER PTHR30081:SF8 3 117 1.6E-102 T 23-04-2016 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 PANTHER PTHR30081:SF8 455 755 1.6E-102 T 23-04-2016 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 Pfam PF02355 Protein export membrane protein 244 409 4.1E-14 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 Pfam PF02355 Protein export membrane protein 556 733 6.5E-62 T 23-04-2016 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 480 724 1.8E-67 T 23-04-2016 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 182 402 1.3E-51 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 559 721 9.9E-47 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 424 30.572 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 SUPERFAMILY SSF82866 557 736 7.32E-35 T 23-04-2016 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 PRINTS PR01755 Bacterial translocase SecF protein signature 672 687 3.2E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 PRINTS PR01755 Bacterial translocase SecF protein signature 478 493 3.2E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 PRINTS PR01755 Bacterial translocase SecF protein signature 636 654 3.2E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 PRINTS PR01755 Bacterial translocase SecF protein signature 588 602 3.2E-26 T 23-04-2016 IPR022645 Protein-export membrane protein SecD/SecF, bacterial SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 Gene3D G3DSA:1.20.1640.10 223 416 2.9E-26 T 23-04-2016 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 Gene3D G3DSA:1.20.1640.10 569 742 7.5E-25 T 23-04-2016 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 Gene3D G3DSA:1.20.1640.10 504 532 7.5E-25 T 23-04-2016 SHYC_RS06185 cac3512da7359fedc455dc44a611ee8f 759 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 34 409 4.0E-98 T 23-04-2016 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 SHYC_RS10220 4ce2b4f4f18daa67c75907033670c9b2 78 SMART SM00899 2 75 5.8E-10 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHYC_RS10220 4ce2b4f4f18daa67c75907033670c9b2 78 Pfam PF04023 FeoA domain 5 73 2.1E-12 T 23-04-2016 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 SHYC_RS10220 4ce2b4f4f18daa67c75907033670c9b2 78 SUPERFAMILY SSF50037 6 74 7.94E-13 T 23-04-2016 IPR008988 Transcriptional repressor, C-terminal SHYC_RS09505 e9d689d2cda6976bfe4f2f146315d9bd 236 Gene3D G3DSA:3.20.20.70 16 235 7.0E-63 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS09505 e9d689d2cda6976bfe4f2f146315d9bd 236 SUPERFAMILY SSF51569 20 232 3.66E-55 T 23-04-2016 SHYC_RS09505 e9d689d2cda6976bfe4f2f146315d9bd 236 PANTHER PTHR21089:SF5 1 234 4.2E-50 T 23-04-2016 SHYC_RS09505 e9d689d2cda6976bfe4f2f146315d9bd 236 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 10 235 30.24 T 23-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SHYC_RS09505 e9d689d2cda6976bfe4f2f146315d9bd 236 PANTHER PTHR21089 1 234 4.2E-50 T 23-04-2016 SHYC_RS09505 e9d689d2cda6976bfe4f2f146315d9bd 236 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 16 231 2.7E-53 T 23-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SHYC_RS09505 e9d689d2cda6976bfe4f2f146315d9bd 236 Pfam PF01487 Type I 3-dehydroquinase 22 231 2.3E-50 T 23-04-2016 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707|UniPathway: UPA00053 SHYC_RS05365 728be6de8f9c6f581a6e4bd25058136c 245 PANTHER PTHR24220:SF160 4 226 5.4E-91 T 23-04-2016 SHYC_RS05365 728be6de8f9c6f581a6e4bd25058136c 245 SUPERFAMILY SSF52540 3 230 7.77E-62 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05365 728be6de8f9c6f581a6e4bd25058136c 245 SMART SM00382 27 209 3.8E-10 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS05365 728be6de8f9c6f581a6e4bd25058136c 245 Gene3D G3DSA:3.40.50.300 3 228 1.7E-64 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05365 728be6de8f9c6f581a6e4bd25058136c 245 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS05365 728be6de8f9c6f581a6e4bd25058136c 245 Pfam PF00005 ABC transporter 18 161 1.5E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS05365 728be6de8f9c6f581a6e4bd25058136c 245 PANTHER PTHR24220 4 226 5.4E-91 T 23-04-2016 SHYC_RS10335 80cdfc2949f8a71b9bcd2ed542ae1bc8 67 Pfam PF07872 Protein of unknown function (DUF1659) 12 46 1.4E-5 T 23-04-2016 IPR012454 Protein of unknown function DUF1659 SHYC_RS10560 5f1bcd7dbf13c056138e70e052186173 119 SUPERFAMILY SSF89442 2 118 3.01E-47 T 23-04-2016 IPR014934 Protein of unknown function DUF1806 SHYC_RS10560 5f1bcd7dbf13c056138e70e052186173 119 Pfam PF08830 Protein of unknown function (DUF1806) 4 117 1.7E-48 T 23-04-2016 IPR014934 Protein of unknown function DUF1806 SHYC_RS10560 5f1bcd7dbf13c056138e70e052186173 119 Gene3D G3DSA:2.70.180.10 2 118 9.8E-51 T 23-04-2016 IPR014934 Protein of unknown function DUF1806 SHYC_RS11615 b498d45b90d14d4cf7c0f03710fd771c 68 PANTHER PTHR38455 2 68 3.3E-30 T 23-04-2016 SHYC_RS11615 b498d45b90d14d4cf7c0f03710fd771c 68 PANTHER PTHR38455:SF1 2 68 3.3E-30 T 23-04-2016 SHYC_RS11615 b498d45b90d14d4cf7c0f03710fd771c 68 PIRSF PIRSF037263 1 65 1.9E-34 T 23-04-2016 IPR009296 Protein of unknown function DUF951 SHYC_RS11615 b498d45b90d14d4cf7c0f03710fd771c 68 Pfam PF06107 Bacterial protein of unknown function (DUF951) 5 59 1.9E-29 T 23-04-2016 IPR009296 Protein of unknown function DUF951 SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 511 2.7E-14 T 23-04-2016 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 PANTHER PTHR18968 4 545 3.2E-231 T 23-04-2016 SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 311 1.8E-22 T 23-04-2016 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 SUPERFAMILY SSF52518 354 540 2.03E-41 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 PIRSF PIRSF036565 1 546 2.7E-199 T 23-04-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 SUPERFAMILY SSF52467 165 327 4.58E-31 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 Gene3D G3DSA:3.40.50.970 351 535 3.7E-56 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 SUPERFAMILY SSF52518 3 178 2.11E-42 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 177 3.3E-36 T 23-04-2016 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 PANTHER PTHR18968:SF4 4 545 3.2E-231 T 23-04-2016 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 Gene3D G3DSA:3.40.50.1220 188 342 3.8E-42 T 23-04-2016 IPR029035 DHS-like NAD/FAD-binding domain SHYC_RS02130 707445bc1204a52d0c25e430ed2b96ff 546 Gene3D G3DSA:3.40.50.970 1 178 1.0E-71 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS11840 1e0be766f9136d28cb607d2daab1f54c 477 SUPERFAMILY SSF89550 8 301 1.39E-14 T 23-04-2016 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 SHYC_RS11840 1e0be766f9136d28cb607d2daab1f54c 477 Gene3D G3DSA:3.20.20.140 7 301 1.1E-20 T 23-04-2016 SHYC_RS11840 1e0be766f9136d28cb607d2daab1f54c 477 SMART SM00481 8 86 1.9E-6 T 23-04-2016 IPR003141 Polymerase/histidinol phosphatase, N-terminal GO:0003677|GO:0003887|GO:0006260 SHYC_RS11840 1e0be766f9136d28cb607d2daab1f54c 477 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 367 476 4.4E-19 T 23-04-2016 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 SHYC_RS11840 1e0be766f9136d28cb607d2daab1f54c 477 PANTHER PTHR32294:SF0 359 476 4.9E-68 T 23-04-2016 SHYC_RS11840 1e0be766f9136d28cb607d2daab1f54c 477 Pfam PF02811 PHP domain 10 217 1.4E-21 T 23-04-2016 IPR004013 PHP domain GO:0003824 SHYC_RS11840 1e0be766f9136d28cb607d2daab1f54c 477 PANTHER PTHR32294 10 335 4.9E-68 T 23-04-2016 SHYC_RS11840 1e0be766f9136d28cb607d2daab1f54c 477 PANTHER PTHR32294:SF0 10 335 4.9E-68 T 23-04-2016 SHYC_RS11840 1e0be766f9136d28cb607d2daab1f54c 477 PANTHER PTHR32294 359 476 4.9E-68 T 23-04-2016 SHYC_RS09520 1287e2a5486c2af776610eb64fdbd475 491 PANTHER PTHR23501 45 491 4.7E-17 T 23-04-2016 SHYC_RS09520 1287e2a5486c2af776610eb64fdbd475 491 SUPERFAMILY SSF103473 456 485 1.96E-22 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS09520 1287e2a5486c2af776610eb64fdbd475 491 SUPERFAMILY SSF103473 19 206 1.96E-22 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS09520 1287e2a5486c2af776610eb64fdbd475 491 SUPERFAMILY SSF103473 254 425 1.96E-22 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS09520 1287e2a5486c2af776610eb64fdbd475 491 Pfam PF07690 Major Facilitator Superfamily 38 390 3.4E-12 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS09520 1287e2a5486c2af776610eb64fdbd475 491 Gene3D G3DSA:1.20.1250.20 2 199 5.0E-12 T 23-04-2016 SHYC_RS03195 dec1372f8dfac05dd2acf75332704f60 122 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 122 26.391 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03195 dec1372f8dfac05dd2acf75332704f60 122 Pfam PF01196 Ribosomal protein L17 16 122 9.4E-37 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03195 dec1372f8dfac05dd2acf75332704f60 122 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03195 dec1372f8dfac05dd2acf75332704f60 122 PANTHER PTHR14413 3 122 9.6E-51 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03195 dec1372f8dfac05dd2acf75332704f60 122 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 122 1.0E-42 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03195 dec1372f8dfac05dd2acf75332704f60 122 Gene3D G3DSA:3.90.1030.10 2 122 1.9E-45 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03195 dec1372f8dfac05dd2acf75332704f60 122 PANTHER PTHR14413:SF5 3 122 9.6E-51 T 23-04-2016 SHYC_RS03195 dec1372f8dfac05dd2acf75332704f60 122 SUPERFAMILY SSF64263 2 122 5.49E-41 T 23-04-2016 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS02070 17a463d8c3b2834a212a1f86e99f976e 375 Gene3D G3DSA:3.40.50.2000 1 199 8.7E-68 T 23-04-2016 SHYC_RS02070 17a463d8c3b2834a212a1f86e99f976e 375 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 363 8.6E-75 T 23-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SHYC_RS02070 17a463d8c3b2834a212a1f86e99f976e 375 Gene3D G3DSA:3.40.50.2000 200 363 1.8E-50 T 23-04-2016 SHYC_RS02070 17a463d8c3b2834a212a1f86e99f976e 375 PANTHER PTHR18964 2 374 4.3E-182 T 23-04-2016 SHYC_RS02070 17a463d8c3b2834a212a1f86e99f976e 375 SUPERFAMILY SSF53756 3 373 2.32E-106 T 23-04-2016 SHYC_RS02070 17a463d8c3b2834a212a1f86e99f976e 375 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 360 1.6E-88 T 23-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain SHYC_RS02070 17a463d8c3b2834a212a1f86e99f976e 375 PANTHER PTHR18964:SF70 2 374 4.3E-182 T 23-04-2016 SHYC_RS01945 21cdfc46e48d436f4e035af44c421416 206 PANTHER PTHR23026 3 206 3.8E-52 T 23-04-2016 SHYC_RS01945 21cdfc46e48d436f4e035af44c421416 206 PANTHER PTHR23026:SF111 3 206 3.8E-52 T 23-04-2016 SHYC_RS01945 21cdfc46e48d436f4e035af44c421416 206 SUPERFAMILY SSF55469 3 203 1.18E-57 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 SHYC_RS01945 21cdfc46e48d436f4e035af44c421416 206 Gene3D G3DSA:3.40.109.10 1 204 1.6E-59 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 SHYC_RS01945 21cdfc46e48d436f4e035af44c421416 206 Pfam PF00881 Nitroreductase family 9 186 8.7E-30 T 23-04-2016 IPR029479 Nitroreductase SHYC_RS06900 440c62e5e9fd174f9c68bb5caf848203 241 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 4.6E-28 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS06900 440c62e5e9fd174f9c68bb5caf848203 241 Gene3D G3DSA:1.10.10.10 132 234 2.5E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06900 440c62e5e9fd174f9c68bb5caf848203 241 PANTHER PTHR26402 3 232 4.0E-116 T 23-04-2016 SHYC_RS06900 440c62e5e9fd174f9c68bb5caf848203 241 SMART SM00448 3 113 6.1E-46 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS06900 440c62e5e9fd174f9c68bb5caf848203 241 Pfam PF00072 Response regulator receiver domain 5 113 6.9E-31 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS06900 440c62e5e9fd174f9c68bb5caf848203 241 SMART SM00862 154 231 5.4E-27 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS06900 440c62e5e9fd174f9c68bb5caf848203 241 Gene3D G3DSA:3.40.50.2300 4 123 1.1E-41 T 23-04-2016 SHYC_RS06900 440c62e5e9fd174f9c68bb5caf848203 241 PANTHER PTHR26402:SF531 3 232 4.0E-116 T 23-04-2016 SHYC_RS06900 440c62e5e9fd174f9c68bb5caf848203 241 SUPERFAMILY SSF52172 5 189 1.43E-43 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS02285 8c8708713b3d4282aa88e20d652f25a4 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 1.1E-28 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SHYC_RS02285 8c8708713b3d4282aa88e20d652f25a4 329 PANTHER PTHR24220 8 324 2.6E-154 T 23-04-2016 SHYC_RS02285 8c8708713b3d4282aa88e20d652f25a4 329 Pfam PF00005 ABC transporter 34 184 1.9E-30 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS02285 8c8708713b3d4282aa88e20d652f25a4 329 SUPERFAMILY SSF52540 6 256 3.36E-71 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02285 8c8708713b3d4282aa88e20d652f25a4 329 Gene3D G3DSA:3.40.50.300 5 258 2.2E-80 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02285 8c8708713b3d4282aa88e20d652f25a4 329 SMART SM00382 42 234 2.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS02285 8c8708713b3d4282aa88e20d652f25a4 329 PANTHER PTHR24220:SF336 8 324 2.6E-154 T 23-04-2016 SHYC_RS02285 8c8708713b3d4282aa88e20d652f25a4 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 4.2E-20 T 23-04-2016 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 SHYC_RS02285 8c8708713b3d4282aa88e20d652f25a4 329 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS02310 5ce0ec3c41d39e89490c9f0a10f3a492 299 Pfam PF03313 Serine dehydratase alpha chain 15 276 8.6E-65 T 23-04-2016 IPR005130 Serine dehydratase-like, alpha subunit SHYC_RS02310 5ce0ec3c41d39e89490c9f0a10f3a492 299 PANTHER PTHR30182 1 290 1.3E-127 T 23-04-2016 SHYC_RS02310 5ce0ec3c41d39e89490c9f0a10f3a492 299 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 292 9.2E-105 T 23-04-2016 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SHYC_RS08500 34d56bd459d95c5b08cf7828bcd7145a 303 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 19 296 8.2E-90 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 SHYC_RS08500 34d56bd459d95c5b08cf7828bcd7145a 303 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 299 16.753 T 23-04-2016 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 UniPathway: UPA00834 SHYC_RS08500 34d56bd459d95c5b08cf7828bcd7145a 303 PANTHER PTHR11048 4 302 1.1E-138 T 23-04-2016 SHYC_RS08500 34d56bd459d95c5b08cf7828bcd7145a 303 Pfam PF01040 UbiA prenyltransferase family 32 284 4.5E-54 T 23-04-2016 IPR000537 UbiA prenyltransferase family GO:0004659|GO:0016021 SHYC_RS08500 34d56bd459d95c5b08cf7828bcd7145a 303 PANTHER PTHR11048:SF20 4 302 1.1E-138 T 23-04-2016 SHYC_RS05185 e04b09f2a56aa076d46cda667441fa2f 66 Gene3D G3DSA:3.40.50.150 3 52 2.2E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05185 e04b09f2a56aa076d46cda667441fa2f 66 SUPERFAMILY SSF53335 2 50 8.86E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05185 e04b09f2a56aa076d46cda667441fa2f 66 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 51 1.1E-5 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 SUPERFAMILY SSF53850 89 285 9.77E-26 T 23-04-2016 SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 PANTHER PTHR30126 1 283 3.3E-130 T 23-04-2016 SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.7E-15 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.7E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.7E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.7E-8 T 23-04-2016 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 SUPERFAMILY SSF46785 1 111 3.05E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 Gene3D G3DSA:3.40.190.10 88 217 3.3E-19 T 23-04-2016 SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 Gene3D G3DSA:1.10.10.10 1 84 1.1E-19 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 PANTHER PTHR30126:SF35 1 283 3.3E-130 T 23-04-2016 SHYC_RS10095 fe35ccc0fe7873398f4f39b463fc3d4b 289 Pfam PF03466 LysR substrate binding domain 88 283 3.9E-28 T 23-04-2016 IPR005119 LysR, substrate-binding SHYC_RS06065 2a83fa976e9b3745ad721cf58577e09c 278 PANTHER PTHR30071 1 275 8.1E-66 T 23-04-2016 SHYC_RS06065 2a83fa976e9b3745ad721cf58577e09c 278 Pfam PF01578 Cytochrome C assembly protein 69 266 4.3E-19 T 23-04-2016 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 SHYC_RS06065 2a83fa976e9b3745ad721cf58577e09c 278 PANTHER PTHR30071:SF6 1 275 8.1E-66 T 23-04-2016 SHYC_RS02230 24d432e72b2175f96443e6219d982d0c 425 Gene3D G3DSA:1.20.1250.20 6 204 7.3E-47 T 23-04-2016 SHYC_RS02230 24d432e72b2175f96443e6219d982d0c 425 SUPERFAMILY SSF103473 6 416 1.44E-81 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS02230 24d432e72b2175f96443e6219d982d0c 425 PANTHER PTHR11662 5 423 3.0E-153 T 23-04-2016 SHYC_RS02230 24d432e72b2175f96443e6219d982d0c 425 Gene3D G3DSA:1.20.1250.20 222 418 3.9E-27 T 23-04-2016 SHYC_RS02230 24d432e72b2175f96443e6219d982d0c 425 Pfam PF07690 Major Facilitator Superfamily 19 376 2.6E-56 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS02230 24d432e72b2175f96443e6219d982d0c 425 PANTHER PTHR11662:SF18 5 423 3.0E-153 T 23-04-2016 SHYC_RS04435 d62900430b314dd0c3caa0115589ee11 153 Pfam PF01475 Ferric uptake regulator family 21 139 5.8E-40 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHYC_RS04435 d62900430b314dd0c3caa0115589ee11 153 Gene3D G3DSA:1.10.10.10 14 92 5.5E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS04435 d62900430b314dd0c3caa0115589ee11 153 PANTHER PTHR33202:SF7 9 153 2.9E-62 T 23-04-2016 SHYC_RS04435 d62900430b314dd0c3caa0115589ee11 153 PANTHER PTHR33202 9 153 2.9E-62 T 23-04-2016 SHYC_RS04435 d62900430b314dd0c3caa0115589ee11 153 SUPERFAMILY SSF46785 15 143 2.21E-40 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01470 08219e6c6ba4343d32fb419a369f792c 870 Pfam PF09586 Bacterial membrane protein YfhO 18 848 3.0E-134 T 23-04-2016 IPR018580 Uncharacterised protein family YfhO SHYC_RS01470 08219e6c6ba4343d32fb419a369f792c 870 PANTHER PTHR38454:SF1 1 866 3.8E-93 T 23-04-2016 SHYC_RS01470 08219e6c6ba4343d32fb419a369f792c 870 PANTHER PTHR38454 1 866 3.8E-93 T 23-04-2016 SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 Gene3D G3DSA:3.40.1390.20 67 185 2.4E-39 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 SUPERFAMILY SSF54631 180 305 3.54E-28 T 23-04-2016 SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 Gene3D G3DSA:3.10.580.10 186 307 1.8E-27 T 23-04-2016 SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 SMART SM00116 258 306 1.8 T 23-04-2016 IPR000644 CBS domain SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 SMART SM00116 199 247 0.03 T 23-04-2016 IPR000644 CBS domain SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 PANTHER PTHR11911 190 310 3.9E-21 T 23-04-2016 SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 58 5.8E-5 T 23-04-2016 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 Gene3D G3DSA:1.10.10.10 10 66 4.1E-6 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 Pfam PF00571 CBS domain 204 244 7.0E-6 T 23-04-2016 IPR000644 CBS domain SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 Pfam PF00571 CBS domain 252 305 3.2E-6 T 23-04-2016 IPR000644 CBS domain SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 SUPERFAMILY SSF75138 72 184 9.42E-29 T 23-04-2016 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 SUPERFAMILY SSF54637 333 430 1.47E-8 T 23-04-2016 IPR029069 HotDog domain SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 Gene3D G3DSA:3.10.129.10 333 429 6.4E-5 T 23-04-2016 IPR029069 HotDog domain SHYC_RS05915 1a4a8a173a8c0ecc728ba9d5c44f7a30 431 Pfam PF07085 DRTGG domain 75 177 1.4E-28 T 23-04-2016 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637|UniPathway: UPA00340 SHYC_RS11200 6d706c9463ba01b90715f61a7a217940 275 PANTHER PTHR31756 15 270 3.1E-91 T 23-04-2016 SHYC_RS11200 6d706c9463ba01b90715f61a7a217940 275 PANTHER PTHR31756:SF3 15 270 3.1E-91 T 23-04-2016 SHYC_RS11200 6d706c9463ba01b90715f61a7a217940 275 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 13 275 54.338 T 23-04-2016 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein SHYC_RS11200 6d706c9463ba01b90715f61a7a217940 275 Pfam PF03618 Kinase/pyrophosphorylase 15 270 1.4E-89 T 23-04-2016 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 SHYC_RS04835 905defb1904a1adf5952200acb42a34f 61 Pfam PF09642 YonK protein 5 57 2.6E-9 T 23-04-2016 IPR018600 Bacillus phage SPbeta, YonK SHYC_RS04835 905defb1904a1adf5952200acb42a34f 61 SUPERFAMILY SSF160570 7 57 1.96E-8 T 23-04-2016 SHYC_RS01000 1674913bd57ea9c67018c4c3b1ef02c1 219 Pfam PF03786 D-mannonate dehydratase (UxuA) 4 216 5.5E-85 T 23-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 SHYC_RS01000 1674913bd57ea9c67018c4c3b1ef02c1 219 PANTHER PTHR30387 17 214 6.1E-72 T 23-04-2016 SHYC_RS01000 1674913bd57ea9c67018c4c3b1ef02c1 219 PANTHER PTHR30387:SF2 17 214 6.1E-72 T 23-04-2016 SHYC_RS01000 1674913bd57ea9c67018c4c3b1ef02c1 219 SUPERFAMILY SSF51658 33 212 1.21E-46 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SHYC_RS01000 1674913bd57ea9c67018c4c3b1ef02c1 219 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 16 216 5.0E-63 T 23-04-2016 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242|UniPathway: UPA00246 SHYC_RS01000 1674913bd57ea9c67018c4c3b1ef02c1 219 Gene3D G3DSA:3.20.20.150 14 217 1.0E-81 T 23-04-2016 IPR013022 Xylose isomerase-like, TIM barrel domain SHYC_RS08065 b61937404e72a58f44d1ee2d8b02d258 221 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 8.6E-77 T 23-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SHYC_RS08065 b61937404e72a58f44d1ee2d8b02d258 221 PIRSF PIRSF036692 1 220 1.7E-92 T 23-04-2016 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SHYC_RS08065 b61937404e72a58f44d1ee2d8b02d258 221 Gene3D G3DSA:3.30.1330.90 14 133 2.4E-28 T 23-04-2016 IPR029009 Allosteric substrate binding domain SHYC_RS08065 b61937404e72a58f44d1ee2d8b02d258 221 PANTHER PTHR30182 1 218 2.2E-98 T 23-04-2016 SHYC_RS08065 b61937404e72a58f44d1ee2d8b02d258 221 Gene3D G3DSA:3.30.70.260 134 216 3.0E-20 T 23-04-2016 SHYC_RS08065 b61937404e72a58f44d1ee2d8b02d258 221 SUPERFAMILY SSF55021 137 216 2.04E-16 T 23-04-2016 SHYC_RS08065 b61937404e72a58f44d1ee2d8b02d258 221 PANTHER PTHR30182:SF2 1 218 2.2E-98 T 23-04-2016 SHYC_RS08065 b61937404e72a58f44d1ee2d8b02d258 221 Pfam PF03315 Serine dehydratase beta chain 5 114 4.0E-12 T 23-04-2016 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17|UniPathway: UPA00138 SHYC_RS08065 b61937404e72a58f44d1ee2d8b02d258 221 SUPERFAMILY SSF143548 19 137 7.98E-30 T 23-04-2016 IPR029009 Allosteric substrate binding domain SHYC_RS08065 b61937404e72a58f44d1ee2d8b02d258 221 Pfam PF01842 ACT domain 148 210 6.6E-10 T 23-04-2016 IPR002912 ACT domain GO:0008152|GO:0016597 SHYC_RS11440 b857a91a59edac24b9d10df66a1655f0 202 Pfam PF01944 Stage II sporulation protein M 20 194 9.7E-15 T 23-04-2016 IPR002798 Stage II sporulation protein M-like SHYC_RS01685 d20434caf62a1cc5ba7a8e1d40a1ace2 413 Gene3D G3DSA:3.40.630.30 308 388 2.8E-51 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS01685 d20434caf62a1cc5ba7a8e1d40a1ace2 413 Gene3D G3DSA:3.40.630.30 165 242 2.8E-51 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS01685 d20434caf62a1cc5ba7a8e1d40a1ace2 413 SUPERFAMILY SSF46589 243 307 1.62E-10 T 23-04-2016 IPR010978 tRNA-binding arm GO:0000166 Reactome: REACT_71 SHYC_RS01685 d20434caf62a1cc5ba7a8e1d40a1ace2 413 Pfam PF02388 FemAB family 6 412 2.2E-138 T 23-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 SHYC_RS01685 d20434caf62a1cc5ba7a8e1d40a1ace2 413 PANTHER PTHR36174:SF2 1 412 2.5E-199 T 23-04-2016 SHYC_RS01685 d20434caf62a1cc5ba7a8e1d40a1ace2 413 PANTHER PTHR36174 1 412 2.5E-199 T 23-04-2016 SHYC_RS01685 d20434caf62a1cc5ba7a8e1d40a1ace2 413 SUPERFAMILY SSF55729 1 163 1.75E-49 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS01685 d20434caf62a1cc5ba7a8e1d40a1ace2 413 Gene3D G3DSA:3.40.630.30 1 164 1.1E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS01685 d20434caf62a1cc5ba7a8e1d40a1ace2 413 SUPERFAMILY SSF55729 309 409 5.56E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS01685 d20434caf62a1cc5ba7a8e1d40a1ace2 413 SUPERFAMILY SSF55729 165 243 5.56E-37 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 SUPERFAMILY SSF51306 25 181 2.09E-50 T 23-04-2016 IPR015927 Peptidase S24/S26A/S26B/S26C SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 Gene3D G3DSA:2.10.109.10 23 85 1.2E-38 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 Gene3D G3DSA:2.10.109.10 136 184 1.2E-38 T 23-04-2016 IPR028360 Peptidase S24/S26, beta-ribbon domain SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 PANTHER PTHR12383:SF14 2 179 2.5E-61 T 23-04-2016 SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 ProSitePatterns PS00761 Signal peptidases I signature 3. 141 154 - T 23-04-2016 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 ProSitePatterns PS00760 Signal peptidases I lysine active site. 77 89 - T 23-04-2016 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 PANTHER PTHR12383 2 179 2.5E-61 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 9 177 5.8E-54 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 Pfam PF00717 Peptidase S24-like 32 99 9.2E-21 T 23-04-2016 IPR019759 Peptidase S24/S26A/S26B SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 25 41 4.3E-21 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 75 87 4.3E-21 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 136 155 4.3E-21 T 23-04-2016 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 SHYC_RS09210 72fa43cd284c2f92536c2755c82b56c6 190 ProSitePatterns PS00501 Signal peptidases I serine active site. 34 41 - T 23-04-2016 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: REACT_15380 SHYC_RS10180 7ca6f050062c70b49812dec90a356b95 355 PANTHER PTHR37814 3 354 1.4E-107 T 23-04-2016 SHYC_RS10180 7ca6f050062c70b49812dec90a356b95 355 PANTHER PTHR37814:SF1 3 354 1.4E-107 T 23-04-2016 SHYC_RS06490 ad3f3665df990545ca51a1237d9973f4 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 152 24.176 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SHYC_RS06490 ad3f3665df990545ca51a1237d9973f4 154 Gene3D G3DSA:3.40.390.30 10 151 9.0E-50 T 23-04-2016 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 SHYC_RS06490 ad3f3665df990545ca51a1237d9973f4 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 118 128 - T 23-04-2016 IPR020549 Endoribonuclease YbeY, conserved site SHYC_RS06490 ad3f3665df990545ca51a1237d9973f4 154 Pfam PF02130 Uncharacterized protein family UPF0054 14 147 5.5E-47 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SHYC_RS06490 ad3f3665df990545ca51a1237d9973f4 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 148 1.6E-42 T 23-04-2016 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 SHYC_RS06490 ad3f3665df990545ca51a1237d9973f4 154 SUPERFAMILY SSF55486 2 152 7.87E-46 T 23-04-2016 SHYC_RS06490 ad3f3665df990545ca51a1237d9973f4 154 PANTHER PTHR22881 21 150 1.1E-52 T 23-04-2016 SHYC_RS10050 5534d0b0dd35470e64d18acb31ec87ab 148 PANTHER PTHR35146 1 145 3.5E-33 T 23-04-2016 SHYC_RS10050 5534d0b0dd35470e64d18acb31ec87ab 148 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 148 26.503 T 23-04-2016 IPR003791 Protein of unknown function UPF0178 SHYC_RS10050 5534d0b0dd35470e64d18acb31ec87ab 148 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 16 146 1.5E-33 T 23-04-2016 IPR003791 Protein of unknown function UPF0178 SHYC_RS10050 5534d0b0dd35470e64d18acb31ec87ab 148 PANTHER PTHR35146:SF1 1 145 3.5E-33 T 23-04-2016 SHYC_RS06340 8af5589b47b7c24c80d36e28f81b5a4a 253 PANTHER PTHR30292:SF0 1 253 2.2E-128 T 23-04-2016 SHYC_RS06340 8af5589b47b7c24c80d36e28f81b5a4a 253 SUPERFAMILY SSF88713 3 251 2.45E-100 T 23-04-2016 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 SHYC_RS06340 8af5589b47b7c24c80d36e28f81b5a4a 253 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 45.534 T 23-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF SHYC_RS06340 8af5589b47b7c24c80d36e28f81b5a4a 253 PANTHER PTHR30292 1 253 2.2E-128 T 23-04-2016 SHYC_RS06340 8af5589b47b7c24c80d36e28f81b5a4a 253 Pfam PF03746 LamB/YcsF family 4 241 3.0E-103 T 23-04-2016 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 371 104.228 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 367 1.3E-138 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 23-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 PANTHER PTHR32182:SF0 1 370 8.9E-89 T 23-04-2016 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 SUPERFAMILY SSF52540 245 364 8.72E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 SUPERFAMILY SSF52540 1 217 8.72E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 PANTHER PTHR32182 1 370 8.9E-89 T 23-04-2016 SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 ProSitePatterns PS00618 RecF protein signature 2. 313 331 - T 23-04-2016 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 363 1.1E-16 T 23-04-2016 IPR003395 RecF/RecN/SMC, N-terminal SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 Gene3D G3DSA:3.40.50.300 245 368 1.3E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00025 00469f08c7e130f9b7965eee2f6817dc 371 Gene3D G3DSA:3.40.50.300 1 170 1.3E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11650 c4292d0015899beb3f04a8166f1e1f65 247 SUPERFAMILY SSF102198 15 245 1.44E-52 T 23-04-2016 SHYC_RS11650 c4292d0015899beb3f04a8166f1e1f65 247 Pfam PF04199 Putative cyclase 18 184 2.3E-32 T 23-04-2016 IPR007325 Kynurenine formamidase GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|UniPathway: UPA00333 SHYC_RS11650 c4292d0015899beb3f04a8166f1e1f65 247 PANTHER PTHR31118 17 247 3.2E-63 T 23-04-2016 SHYC_RS11650 c4292d0015899beb3f04a8166f1e1f65 247 Gene3D G3DSA:3.50.30.50 15 246 1.6E-58 T 23-04-2016 SHYC_RS11650 c4292d0015899beb3f04a8166f1e1f65 247 PANTHER PTHR31118:SF9 17 247 3.2E-63 T 23-04-2016 SHYC_RS01530 2a81b4d11a376f38fd160d5904f3aa5e 337 TIGRFAM TIGR00802 nico: transition metal uptake transporter, Ni2+-Co2+ transporter (NiCoT) family 43 319 3.4E-113 T 23-04-2016 IPR004688 Transition metal uptake transporter nickel/cobalt GO:0015099|GO:0016021|GO:0035444|GO:0046872 SHYC_RS01530 2a81b4d11a376f38fd160d5904f3aa5e 337 PANTHER PTHR31611 3 337 2.6E-92 T 23-04-2016 SHYC_RS01530 2a81b4d11a376f38fd160d5904f3aa5e 337 Pfam PF03824 High-affinity nickel-transport protein 39 324 2.6E-87 T 23-04-2016 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 PANTHER PTHR32120 3 288 1.7E-105 T 23-04-2016 SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 Gene3D G3DSA:2.40.50.140 2 61 1.5E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 SUPERFAMILY SSF52540 65 289 4.94E-50 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 Pfam PF03193 Protein of unknown function, DUF258 59 223 1.2E-52 T 23-04-2016 IPR010914 RsgA type GTPase domain GO:0003924|GO:0005525 SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 SUPERFAMILY SSF50249 3 63 4.63E-12 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 Gene3D G3DSA:3.40.50.300 63 221 2.0E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 Gene3D G3DSA:1.10.40.50 225 289 4.4E-23 T 23-04-2016 SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 PANTHER PTHR32120:SF2 3 288 1.7E-105 T 23-04-2016 SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 2 288 35.896 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 281 7.5E-75 T 23-04-2016 IPR004881 Ribosome biogenesis GTPase RsgA, putative GO:0003924|GO:0005525 SHYC_RS08095 e23bb8a75d7fe5d44406772cc4f62122 291 Pfam PF16745 RsgA N-terminal domain 3 56 2.6E-18 T 23-04-2016 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 SUPERFAMILY SSF52540 261 445 3.54E-41 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 SUPERFAMILY SSF52540 533 712 2.92E-32 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 Hamap MF_00983 Probable primosomal protein N' [priA]. 11 804 25.314 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 Gene3D G3DSA:3.40.50.300 567 706 4.5E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 Gene3D G3DSA:3.40.50.300 479 502 4.5E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 SMART SM00487 264 455 2.6E-20 T 23-04-2016 IPR014001 Helicase superfamily 1/2, ATP-binding domain SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 SMART SM00490 566 663 1.1E-10 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 Pfam PF04851 Type III restriction enzyme, res subunit 268 431 5.8E-16 T 23-04-2016 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 PANTHER PTHR30580 1 805 3.0E-302 T 23-04-2016 SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 TIGRFAM TIGR00595 priA: primosomal protein N' 292 801 2.3E-212 T 23-04-2016 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 Gene3D G3DSA:3.40.50.300 257 452 2.8E-42 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08140 103d34db505e237caeb5dc26c17f85f8 805 Pfam PF00271 Helicase conserved C-terminal domain 578 662 5.1E-9 T 23-04-2016 IPR001650 Helicase, C-terminal SHYC_RS02105 643597a21d2cb8e5fe7d87286da7fa15 366 SUPERFAMILY SSF53383 4 364 5.56E-99 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS02105 643597a21d2cb8e5fe7d87286da7fa15 366 PANTHER PTHR30244:SF18 1 366 1.5E-148 T 23-04-2016 SHYC_RS02105 643597a21d2cb8e5fe7d87286da7fa15 366 PIRSF PIRSF000390 1 366 3.2E-97 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHYC_RS02105 643597a21d2cb8e5fe7d87286da7fa15 366 Gene3D G3DSA:3.40.640.10 1 237 6.2E-89 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS02105 643597a21d2cb8e5fe7d87286da7fa15 366 Gene3D G3DSA:3.90.1150.10 239 364 2.0E-44 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS02105 643597a21d2cb8e5fe7d87286da7fa15 366 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 5 360 1.2E-93 T 23-04-2016 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase SHYC_RS02105 643597a21d2cb8e5fe7d87286da7fa15 366 PANTHER PTHR30244 1 366 1.5E-148 T 23-04-2016 SHYC_RS03750 5874fd2f3586321d8ea9db90a4355cfa 210 Gene3D G3DSA:1.10.3210.10 181 209 3.6E-43 T 23-04-2016 IPR006674 HD domain SHYC_RS03750 5874fd2f3586321d8ea9db90a4355cfa 210 Gene3D G3DSA:1.10.3210.10 7 139 3.6E-43 T 23-04-2016 IPR006674 HD domain SHYC_RS03750 5874fd2f3586321d8ea9db90a4355cfa 210 PANTHER PTHR33594 7 209 2.1E-65 T 23-04-2016 SHYC_RS03750 5874fd2f3586321d8ea9db90a4355cfa 210 SUPERFAMILY SSF109604 5 209 9.2E-63 T 23-04-2016 SHYC_RS03750 5874fd2f3586321d8ea9db90a4355cfa 210 SMART SM00471 21 135 3.8E-11 T 23-04-2016 IPR003607 HD/PDEase domain SHYC_RS03750 5874fd2f3586321d8ea9db90a4355cfa 210 Pfam PF01966 HD domain 27 125 5.3E-10 T 23-04-2016 IPR006674 HD domain SHYC_RS03750 5874fd2f3586321d8ea9db90a4355cfa 210 PANTHER PTHR33594:SF1 7 209 2.1E-65 T 23-04-2016 SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 PANTHER PTHR23151:SF8 1 415 6.5E-167 T 23-04-2016 SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 Gene3D G3DSA:4.10.320.10 116 166 9.4E-16 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 195 417 1.6E-79 T 23-04-2016 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 PANTHER PTHR23151 1 415 6.5E-167 T 23-04-2016 SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 SUPERFAMILY SSF52777 196 417 9.78E-81 T 23-04-2016 SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 Pfam PF00364 Biotin-requiring enzyme 2 74 2.6E-23 T 23-04-2016 IPR000089 Biotin/lipoyl attachment SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 SUPERFAMILY SSF47005 116 160 9.16E-11 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 Pfam PF02817 e3 binding domain 123 156 2.7E-10 T 23-04-2016 IPR004167 E3-binding domain GO:0008152|GO:0016746 SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 Gene3D G3DSA:3.30.559.10 185 417 3.5E-82 T 23-04-2016 IPR023213 Chloramphenicol acetyltransferase-like domain SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 SUPERFAMILY SSF51230 2 90 3.93E-28 T 23-04-2016 IPR011053 Single hybrid motif SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 Gene3D G3DSA:2.40.50.100 1 91 2.6E-30 T 23-04-2016 SHYC_RS06810 7f67b0a37d553dd7d36f9b37dc768a0f 425 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 23-04-2016 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site SHYC_RS11725 1eb7bf4b77cbbea70e956eee57a7acb3 319 Gene3D G3DSA:3.10.180.10 135 315 3.5E-31 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS11725 1eb7bf4b77cbbea70e956eee57a7acb3 319 Gene3D G3DSA:3.10.180.10 4 134 1.3E-36 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS11725 1eb7bf4b77cbbea70e956eee57a7acb3 319 SUPERFAMILY SSF54593 5 301 3.0E-48 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS11725 1eb7bf4b77cbbea70e956eee57a7acb3 319 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 264 7.2E-22 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SHYC_RS11725 1eb7bf4b77cbbea70e956eee57a7acb3 319 PANTHER PTHR36110:SF3 6 318 8.9E-176 T 23-04-2016 SHYC_RS11725 1eb7bf4b77cbbea70e956eee57a7acb3 319 PANTHER PTHR36110 6 318 8.9E-176 T 23-04-2016 SHYC_RS11630 65e25b6997a06c218ae7e9782173c9d5 367 PANTHER PTHR11808:SF15 13 363 1.8E-140 T 23-04-2016 SHYC_RS11630 65e25b6997a06c218ae7e9782173c9d5 367 Gene3D G3DSA:3.90.1150.10 242 360 2.0E-22 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS11630 65e25b6997a06c218ae7e9782173c9d5 367 Gene3D G3DSA:3.40.640.10 12 241 1.9E-79 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS11630 65e25b6997a06c218ae7e9782173c9d5 367 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 185 199 - T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS11630 65e25b6997a06c218ae7e9782173c9d5 367 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 358 5.6E-109 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS11630 65e25b6997a06c218ae7e9782173c9d5 367 SUPERFAMILY SSF53383 20 359 1.22E-87 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS11630 65e25b6997a06c218ae7e9782173c9d5 367 PANTHER PTHR11808 13 363 1.8E-140 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS11630 65e25b6997a06c218ae7e9782173c9d5 367 PIRSF PIRSF001434 1 362 4.6E-102 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS02290 65e69ad2c92cb7b1600e524ac98d67fc 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 318 6.0E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS02290 65e69ad2c92cb7b1600e524ac98d67fc 320 Gene3D G3DSA:1.10.3720.10 92 312 1.5E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS02290 65e69ad2c92cb7b1600e524ac98d67fc 320 SUPERFAMILY SSF161098 92 302 5.63E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS02290 65e69ad2c92cb7b1600e524ac98d67fc 320 PANTHER PTHR30465 1 319 3.8E-128 T 23-04-2016 SHYC_RS02290 65e69ad2c92cb7b1600e524ac98d67fc 320 PANTHER PTHR30465:SF24 1 319 3.8E-128 T 23-04-2016 SHYC_RS11065 a6855232a7277ec9a3398ac74fe3b91c 446 SUPERFAMILY SSF53383 4 350 1.54E-51 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS11065 a6855232a7277ec9a3398ac74fe3b91c 446 Gene3D G3DSA:3.90.100.10 381 444 1.0E-13 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SHYC_RS11065 a6855232a7277ec9a3398ac74fe3b91c 446 PANTHER PTHR11751 4 336 6.5E-81 T 23-04-2016 SHYC_RS11065 a6855232a7277ec9a3398ac74fe3b91c 446 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 382 425 6.7E-5 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SHYC_RS11065 a6855232a7277ec9a3398ac74fe3b91c 446 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 4 281 5.8E-41 T 23-04-2016 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 SHYC_RS11065 a6855232a7277ec9a3398ac74fe3b91c 446 Gene3D G3DSA:3.40.640.10 4 263 1.2E-62 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS11065 a6855232a7277ec9a3398ac74fe3b91c 446 SUPERFAMILY SSF55904 309 440 6.28E-16 T 23-04-2016 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 SHYC_RS11065 a6855232a7277ec9a3398ac74fe3b91c 446 PANTHER PTHR11751:SF360 4 336 6.5E-81 T 23-04-2016 SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 SUPERFAMILY SSF47648 3 62 7.33E-6 T 23-04-2016 IPR017459 Glycosyl transferase family 3, N-terminal domain SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 2 331 32.705 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 SUPERFAMILY SSF52418 74 330 9.55E-81 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 Pfam PF00591 Glycosyl transferase family, a/b domain 76 322 3.8E-80 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 Gene3D G3DSA:1.20.970.10 3 61 1.4E-5 T 23-04-2016 SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 329 4.2E-95 T 23-04-2016 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18|UniPathway: UPA00035 SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 PANTHER PTHR11922:SF5 17 31 8.2E-116 T 23-04-2016 SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 PANTHER PTHR11922:SF5 62 330 8.2E-116 T 23-04-2016 SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 Gene3D G3DSA:3.40.1030.10 72 330 3.8E-88 T 23-04-2016 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 PANTHER PTHR11922 17 31 8.2E-116 T 23-04-2016 SHYC_RS02145 97c68946599058556b3a45e94f12e8c7 338 PANTHER PTHR11922 62 330 8.2E-116 T 23-04-2016 SHYC_RS01975 eb6f51de77070b61914ee8c53e6f9fa6 301 Gene3D G3DSA:3.40.50.1820 21 265 7.9E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01975 eb6f51de77070b61914ee8c53e6f9fa6 301 Pfam PF12146 Serine aminopeptidase, S33 32 263 3.2E-13 T 23-04-2016 IPR022742 Serine aminopeptidase, S33 SHYC_RS01975 eb6f51de77070b61914ee8c53e6f9fa6 301 SUPERFAMILY SSF53474 195 267 1.35E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01975 eb6f51de77070b61914ee8c53e6f9fa6 301 SUPERFAMILY SSF53474 9 154 1.35E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00900 f3d0d7450837f050dbdae8faabbf1815 303 Gene3D G3DSA:3.30.565.10 150 297 7.3E-28 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00900 f3d0d7450837f050dbdae8faabbf1815 303 SUPERFAMILY SSF55874 153 296 6.16E-27 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00900 f3d0d7450837f050dbdae8faabbf1815 303 SMART SM00387 190 298 1.0E-20 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00900 f3d0d7450837f050dbdae8faabbf1815 303 PANTHER PTHR24423 15 295 4.7E-81 T 23-04-2016 SHYC_RS00900 f3d0d7450837f050dbdae8faabbf1815 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 258 276 2.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00900 f3d0d7450837f050dbdae8faabbf1815 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 242 252 2.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00900 f3d0d7450837f050dbdae8faabbf1815 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 224 238 2.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00900 f3d0d7450837f050dbdae8faabbf1815 303 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 295 2.3E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00900 f3d0d7450837f050dbdae8faabbf1815 303 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 196 297 7.2E-18 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00900 f3d0d7450837f050dbdae8faabbf1815 303 PANTHER PTHR24423:SF557 15 295 4.7E-81 T 23-04-2016 SHYC_RS02445 7197fb029a0be279f4cace4f59032cb5 114 Pfam PF16230 Domain of unknown function (DUF4889) 39 110 9.6E-34 T 23-04-2016 IPR032613 Protein of unknown function DUF4889 SHYC_RS04610 f91f8a8d9faa7d752a491504d5912d1b 199 Gene3D G3DSA:3.40.50.1360 135 196 1.0E-9 T 23-04-2016 SHYC_RS04610 f91f8a8d9faa7d752a491504d5912d1b 199 SUPERFAMILY SSF100950 3 197 1.26E-22 T 23-04-2016 SHYC_RS04610 f91f8a8d9faa7d752a491504d5912d1b 199 Gene3D G3DSA:3.40.50.1360 3 125 2.0E-6 T 23-04-2016 SHYC_RS09810 97fd456932ae6c34a89b5f518ea6dffb 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 2 320 1.1E-125 T 23-04-2016 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|UniPathway: UPA00326 SHYC_RS09810 97fd456932ae6c34a89b5f518ea6dffb 323 SUPERFAMILY SSF47240 4 318 1.72E-76 T 23-04-2016 IPR009078 Ferritin-like superfamily SHYC_RS09810 97fd456932ae6c34a89b5f518ea6dffb 323 Pfam PF00268 Ribonucleotide reductase, small chain 5 280 3.2E-67 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SHYC_RS09810 97fd456932ae6c34a89b5f518ea6dffb 323 Gene3D G3DSA:1.10.620.20 4 282 2.9E-70 T 23-04-2016 IPR012348 Ribonucleotide reductase-related GO:0016491|GO:0055114 Reactome: REACT_1698 SHYC_RS09810 97fd456932ae6c34a89b5f518ea6dffb 323 PANTHER PTHR23409 15 322 8.6E-79 T 23-04-2016 IPR000358 Ribonucleotide reductase small subunit GO:0009186|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: REACT_1698|UniPathway: UPA00326 SHYC_RS08050 f60526da9b3b09285e7d0547c803a86d 186 Gene3D G3DSA:3.10.129.10 65 185 1.4E-23 T 23-04-2016 IPR029069 HotDog domain SHYC_RS08050 f60526da9b3b09285e7d0547c803a86d 186 PIRSF PIRSF037733 1 186 5.8E-74 T 23-04-2016 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 SHYC_RS08050 f60526da9b3b09285e7d0547c803a86d 186 SUPERFAMILY SSF54637 74 180 1.74E-18 T 23-04-2016 IPR029069 HotDog domain SHYC_RS08050 f60526da9b3b09285e7d0547c803a86d 186 Pfam PF03061 Thioesterase superfamily 119 164 1.6E-4 T 23-04-2016 IPR006683 Thioesterase domain SHYC_RS01675 b09200243dc21c352ba0e2464a70c926 191 Pfam PF02734 DAK2 domain 30 187 6.9E-42 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SHYC_RS01675 b09200243dc21c352ba0e2464a70c926 191 SUPERFAMILY SSF101473 2 188 9.81E-50 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SHYC_RS01675 b09200243dc21c352ba0e2464a70c926 191 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 8 188 1.5E-65 T 23-04-2016 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00563+2.7.-.- SHYC_RS01675 b09200243dc21c352ba0e2464a70c926 191 SMART SM01120 30 189 1.1E-53 T 23-04-2016 IPR004007 DhaL domain GO:0004371|GO:0006071 SHYC_RS01675 b09200243dc21c352ba0e2464a70c926 191 PANTHER PTHR28629 1 191 2.8E-54 T 23-04-2016 SHYC_RS10155 610743f8da6f1f0b34a338eda806fa71 333 Pfam PF01384 Phosphate transporter family 22 163 1.5E-40 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SHYC_RS10155 610743f8da6f1f0b34a338eda806fa71 333 Pfam PF01384 Phosphate transporter family 170 322 3.2E-50 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SHYC_RS10155 610743f8da6f1f0b34a338eda806fa71 333 PANTHER PTHR11101 1 333 7.6E-117 T 23-04-2016 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: REACT_15518 SHYC_RS09620 fe82523e3c515c0b270f03afa398d084 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 23-04-2016 IPR019844 Cold-shock conserved site SHYC_RS09620 fe82523e3c515c0b270f03afa398d084 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.9E-30 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHYC_RS09620 fe82523e3c515c0b270f03afa398d084 66 PIRSF PIRSF002599 1 66 3.6E-23 T 23-04-2016 IPR012156 Cold shock, CspA GO:0003676 SHYC_RS09620 fe82523e3c515c0b270f03afa398d084 66 SUPERFAMILY SSF50249 1 65 8.49E-25 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09620 fe82523e3c515c0b270f03afa398d084 66 SMART SM00357 3 66 3.7E-27 T 23-04-2016 IPR011129 Cold shock protein GO:0003676 SHYC_RS09620 fe82523e3c515c0b270f03afa398d084 66 Gene3D G3DSA:2.40.50.140 1 64 1.4E-30 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09620 fe82523e3c515c0b270f03afa398d084 66 PANTHER PTHR11544 1 66 1.2E-37 T 23-04-2016 SHYC_RS09620 fe82523e3c515c0b270f03afa398d084 66 PRINTS PR00050 Cold shock protein signature 39 57 2.8E-19 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHYC_RS09620 fe82523e3c515c0b270f03afa398d084 66 PRINTS PR00050 Cold shock protein signature 24 33 2.8E-19 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHYC_RS09620 fe82523e3c515c0b270f03afa398d084 66 PRINTS PR00050 Cold shock protein signature 4 19 2.8E-19 T 23-04-2016 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 SHYC_RS07775 184ec8cfbec3b30ca9d5fef8a4d800fb 428 SUPERFAMILY SSF63411 13 226 1.3E-22 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHYC_RS07775 184ec8cfbec3b30ca9d5fef8a4d800fb 428 SUPERFAMILY SSF63411 246 410 1.53E-27 T 23-04-2016 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 SHYC_RS07775 184ec8cfbec3b30ca9d5fef8a4d800fb 428 PANTHER PTHR11851 43 406 1.3E-22 T 23-04-2016 SHYC_RS07775 184ec8cfbec3b30ca9d5fef8a4d800fb 428 Gene3D G3DSA:3.30.830.10 245 407 1.3E-26 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SHYC_RS07775 184ec8cfbec3b30ca9d5fef8a4d800fb 428 Gene3D G3DSA:3.30.830.10 11 227 1.2E-69 T 23-04-2016 IPR011237 Peptidase M16 domain GO:0046872 SHYC_RS07775 184ec8cfbec3b30ca9d5fef8a4d800fb 428 Pfam PF05193 Peptidase M16 inactive domain 181 354 2.7E-25 T 23-04-2016 IPR007863 Peptidase M16, C-terminal SHYC_RS03745 b7733323bf932bd1f646e63c2399d805 288 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 54 247 3.8E-45 T 23-04-2016 IPR028055 Membrane insertase YidC/Oxa1, C-terminal SHYC_RS03745 b7733323bf932bd1f646e63c2399d805 288 PANTHER PTHR12428 26 288 4.1E-98 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SHYC_RS03745 b7733323bf932bd1f646e63c2399d805 288 PRINTS PR00701 60kDa inner membrane protein signature 214 237 3.6E-5 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SHYC_RS03745 b7733323bf932bd1f646e63c2399d805 288 PRINTS PR00701 60kDa inner membrane protein signature 128 151 3.6E-5 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SHYC_RS03745 b7733323bf932bd1f646e63c2399d805 288 Pfam PF02096 60Kd inner membrane protein 55 247 8.3E-43 T 23-04-2016 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 SHYC_RS03745 b7733323bf932bd1f646e63c2399d805 288 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 1 251 28.014 T 23-04-2016 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes SHYC_RS03745 b7733323bf932bd1f646e63c2399d805 288 PANTHER PTHR12428:SF20 26 288 4.1E-98 T 23-04-2016 SHYC_RS01020 2aa3b9bea783eb62190f70dd08e2c814 146 PANTHER PTHR37299 1 146 7.5E-47 T 23-04-2016 SHYC_RS01020 2aa3b9bea783eb62190f70dd08e2c814 146 Pfam PF04397 LytTr DNA-binding domain 51 144 1.7E-19 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SHYC_RS01020 2aa3b9bea783eb62190f70dd08e2c814 146 SMART SM00850 49 145 4.6E-23 T 23-04-2016 IPR007492 LytTR DNA-binding domain GO:0003677 SHYC_RS01020 2aa3b9bea783eb62190f70dd08e2c814 146 Gene3D G3DSA:2.40.50.40 42 107 1.3E-13 T 23-04-2016 SHYC_RS01020 2aa3b9bea783eb62190f70dd08e2c814 146 PANTHER PTHR37299:SF2 1 146 7.5E-47 T 23-04-2016 SHYC_RS01430 e3992a7647dc2762693b49051943c251 531 PANTHER PTHR10196 10 531 1.6E-129 T 23-04-2016 SHYC_RS01430 e3992a7647dc2762693b49051943c251 531 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 277 473 2.6E-26 T 23-04-2016 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 SHYC_RS01430 e3992a7647dc2762693b49051943c251 531 SUPERFAMILY SSF53067 271 517 4.75E-18 T 23-04-2016 SHYC_RS01430 e3992a7647dc2762693b49051943c251 531 Gene3D G3DSA:3.30.420.40 273 526 1.9E-10 T 23-04-2016 SHYC_RS01430 e3992a7647dc2762693b49051943c251 531 PANTHER PTHR10196:SF61 10 531 1.6E-129 T 23-04-2016 SHYC_RS01430 e3992a7647dc2762693b49051943c251 531 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 16 265 9.0E-13 T 23-04-2016 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 SHYC_RS01430 e3992a7647dc2762693b49051943c251 531 SUPERFAMILY SSF53067 16 265 6.04E-24 T 23-04-2016 SHYC_RS01430 e3992a7647dc2762693b49051943c251 531 Gene3D G3DSA:3.30.420.40 15 266 4.7E-21 T 23-04-2016 SHYC_RS02650 c43b659a365af2adbcab478a2b0946e9 410 PANTHER PTHR41312 2 410 1.8E-90 T 23-04-2016 SHYC_RS02650 c43b659a365af2adbcab478a2b0946e9 410 Pfam PF12698 ABC-2 family transporter protein 19 385 5.9E-42 T 23-04-2016 SHYC_RS02650 c43b659a365af2adbcab478a2b0946e9 410 Gene3D G3DSA:3.30.450.30 87 217 2.9E-4 T 23-04-2016 SHYC_RS03535 1da5ce1843bc5ede9ad39978f767f1e4 265 SUPERFAMILY SSF53067 1 265 4.29E-52 T 23-04-2016 SHYC_RS03535 1da5ce1843bc5ede9ad39978f767f1e4 265 Pfam PF03630 Fumble 92 263 2.0E-22 T 23-04-2016 IPR004567 Type II pantothenate kinase GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|Reactome: REACT_11193|UniPathway: UPA00241 SHYC_RS03535 1da5ce1843bc5ede9ad39978f767f1e4 265 PIRSF PIRSF036940 1 265 9.8E-113 T 23-04-2016 IPR011602 Type II pantothenate kinase, bacterial GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|Reactome: REACT_11193|UniPathway: UPA00241 SHYC_RS03535 1da5ce1843bc5ede9ad39978f767f1e4 265 Hamap MF_01273 Type II pantothenate kinase [coaW]. 1 265 46.798 T 23-04-2016 IPR011602 Type II pantothenate kinase, bacterial GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|Reactome: REACT_11193|UniPathway: UPA00241 SHYC_RS03535 1da5ce1843bc5ede9ad39978f767f1e4 265 PANTHER PTHR12280:SF27 1 180 5.4E-41 T 23-04-2016 SHYC_RS03535 1da5ce1843bc5ede9ad39978f767f1e4 265 PANTHER PTHR12280 1 180 5.4E-41 T 23-04-2016 SHYC_RS03535 1da5ce1843bc5ede9ad39978f767f1e4 265 TIGRFAM TIGR00555 panK_eukar: pantothenate kinase 1 264 4.8E-77 T 23-04-2016 IPR004567 Type II pantothenate kinase GO:0004594|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961|Reactome: REACT_11193|UniPathway: UPA00241 SHYC_RS07935 3ed87e561bec66b316f9e8e0337b9c61 293 PANTHER PTHR32039 49 289 9.6E-81 T 23-04-2016 SHYC_RS07935 3ed87e561bec66b316f9e8e0337b9c61 293 PANTHER PTHR32039:SF8 49 289 9.6E-81 T 23-04-2016 SHYC_RS07935 3ed87e561bec66b316f9e8e0337b9c61 293 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 287 9.2E-64 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SHYC_RS07935 3ed87e561bec66b316f9e8e0337b9c61 293 Pfam PF02481 DNA recombination-mediator protein A 71 279 1.6E-68 T 23-04-2016 IPR003488 DNA recombination-mediator protein A GO:0009294 SHYC_RS07935 3ed87e561bec66b316f9e8e0337b9c61 293 SUPERFAMILY SSF102405 78 287 1.99E-28 T 23-04-2016 SHYC_RS07935 3ed87e561bec66b316f9e8e0337b9c61 293 Gene3D G3DSA:3.40.50.450 118 278 1.5E-8 T 23-04-2016 SHYC_RS06995 f05da1c1e4093d9e838b3f4361b09334 354 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 12 339 3.7E-102 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SHYC_RS06995 f05da1c1e4093d9e838b3f4361b09334 354 PANTHER PTHR21090 12 351 4.0E-111 T 23-04-2016 SHYC_RS06995 f05da1c1e4093d9e838b3f4361b09334 354 SUPERFAMILY SSF56796 1 350 7.59E-85 T 23-04-2016 SHYC_RS06995 f05da1c1e4093d9e838b3f4361b09334 354 PIRSF PIRSF001455 1 352 1.9E-99 T 23-04-2016 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SHYC_RS06995 f05da1c1e4093d9e838b3f4361b09334 354 Gene3D G3DSA:3.40.50.1970 2 163 1.3E-51 T 23-04-2016 SHYC_RS06995 f05da1c1e4093d9e838b3f4361b09334 354 Pfam PF01761 3-dehydroquinate synthase 59 313 1.5E-84 T 23-04-2016 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SHYC_RS06995 f05da1c1e4093d9e838b3f4361b09334 354 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 345 32.755 T 23-04-2016 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164|UniPathway: UPA00053 SHYC_RS06995 f05da1c1e4093d9e838b3f4361b09334 354 Gene3D G3DSA:1.20.1090.10 164 346 8.1E-42 T 23-04-2016 SHYC_RS08720 a36f2090ed367a6c0a8f961ed256f0bb 188 PANTHER PTHR10520:SF9 1 187 2.3E-74 T 23-04-2016 SHYC_RS08720 a36f2090ed367a6c0a8f961ed256f0bb 188 PANTHER PTHR10520 1 187 2.3E-74 T 23-04-2016 SHYC_RS08720 a36f2090ed367a6c0a8f961ed256f0bb 188 Pfam PF00551 Formyl transferase 3 183 8.0E-51 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS08720 a36f2090ed367a6c0a8f961ed256f0bb 188 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 135 158 - T 23-04-2016 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS08720 a36f2090ed367a6c0a8f961ed256f0bb 188 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 25.98 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SHYC_RS08720 a36f2090ed367a6c0a8f961ed256f0bb 188 Gene3D G3DSA:3.40.50.170 3 187 2.6E-61 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS08720 a36f2090ed367a6c0a8f961ed256f0bb 188 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 187 6.0E-60 T 23-04-2016 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|UniPathway: UPA00074 SHYC_RS08720 a36f2090ed367a6c0a8f961ed256f0bb 188 SUPERFAMILY SSF53328 3 187 9.68E-55 T 23-04-2016 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 SHYC_RS06920 96b794d9b1cba81066ce59b8cd16119b 318 PANTHER PTHR41273:SF2 1 316 6.3E-37 T 23-04-2016 SHYC_RS06920 96b794d9b1cba81066ce59b8cd16119b 318 Pfam PF14493 Helix-turn-helix domain 227 307 9.0E-13 T 23-04-2016 IPR029491 Helicase Helix-turn-helix domain SHYC_RS06920 96b794d9b1cba81066ce59b8cd16119b 318 PANTHER PTHR41273 1 316 6.3E-37 T 23-04-2016 SHYC_RS08345 2c3d4f20ebb8c53acf58779ee11fd6a8 119 Pfam PF11546 Staphylococcal complement inhibitor SCIN 1 111 1.0E-20 T 23-04-2016 IPR021612 Staphylococcal complement inhibitor SCIN SHYC_RS05705 c4a4a2e4d22393e46ebc5de2b1ff8ad4 275 Pfam PF00753 Metallo-beta-lactamase superfamily 51 215 4.8E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS05705 c4a4a2e4d22393e46ebc5de2b1ff8ad4 275 PANTHER PTHR23200:SF41 1 268 6.1E-104 T 23-04-2016 SHYC_RS05705 c4a4a2e4d22393e46ebc5de2b1ff8ad4 275 SUPERFAMILY SSF56281 1 254 2.1E-37 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS05705 c4a4a2e4d22393e46ebc5de2b1ff8ad4 275 Gene3D G3DSA:3.60.15.10 1 253 1.1E-39 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS05705 c4a4a2e4d22393e46ebc5de2b1ff8ad4 275 SMART SM00849 47 251 4.5E-7 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS05705 c4a4a2e4d22393e46ebc5de2b1ff8ad4 275 PANTHER PTHR23200 1 268 6.1E-104 T 23-04-2016 SHYC_RS11350 2f84612d049c6d609c0d2be3b1316493 272 PANTHER PTHR24220 7 255 4.4E-91 T 23-04-2016 SHYC_RS11350 2f84612d049c6d609c0d2be3b1316493 272 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS11350 2f84612d049c6d609c0d2be3b1316493 272 Gene3D G3DSA:3.40.50.300 4 254 2.3E-60 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11350 2f84612d049c6d609c0d2be3b1316493 272 SMART SM00382 32 230 2.0E-13 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS11350 2f84612d049c6d609c0d2be3b1316493 272 Pfam PF00005 ABC transporter 24 180 8.4E-24 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS11350 2f84612d049c6d609c0d2be3b1316493 272 SUPERFAMILY SSF52540 3 260 5.76E-55 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS11350 2f84612d049c6d609c0d2be3b1316493 272 PANTHER PTHR24220:SF535 7 255 4.4E-91 T 23-04-2016 SHYC_RS01285 f809d9fdf04281a3bb12191920977b76 426 SUPERFAMILY SSF53383 5 422 1.97E-126 T 23-04-2016 IPR015424 Pyridoxal phosphate-dependent transferase SHYC_RS01285 f809d9fdf04281a3bb12191920977b76 426 Gene3D G3DSA:3.40.640.10 6 287 5.6E-120 T 23-04-2016 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 SHYC_RS01285 f809d9fdf04281a3bb12191920977b76 426 PANTHER PTHR11808 266 426 2.2E-242 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS01285 f809d9fdf04281a3bb12191920977b76 426 PANTHER PTHR11808 1 236 2.2E-242 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS01285 f809d9fdf04281a3bb12191920977b76 426 Gene3D G3DSA:3.90.1150.10 289 425 9.1E-49 T 23-04-2016 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 GO:0003824 SHYC_RS01285 f809d9fdf04281a3bb12191920977b76 426 PANTHER PTHR11808:SF12 266 426 2.2E-242 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SHYC_RS01285 f809d9fdf04281a3bb12191920977b76 426 PANTHER PTHR11808:SF12 1 236 2.2E-242 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SHYC_RS01285 f809d9fdf04281a3bb12191920977b76 426 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 422 8.9E-142 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS01285 f809d9fdf04281a3bb12191920977b76 426 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 6 422 1.9E-204 T 23-04-2016 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 KEGG: 00270+2.5.1.49|MetaCyc: PWY-5344|MetaCyc: PWY-7174 SHYC_RS01285 f809d9fdf04281a3bb12191920977b76 426 PIRSF PIRSF001434 1 426 9.5E-129 T 23-04-2016 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 SUPERFAMILY SSF51338 3 68 2.23E-16 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 PANTHER PTHR22642:SF1 4 407 1.6E-136 T 23-04-2016 SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 Pfam PF01979 Amidohydrolase family 67 402 3.1E-14 T 23-04-2016 IPR006680 Amidohydrolase-related GO:0016787 SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 SUPERFAMILY SSF51556 70 361 5.05E-67 T 23-04-2016 IPR032466 Metal-dependent hydrolase SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 Gene3D G3DSA:2.30.40.10 30 80 7.5E-14 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 SUPERFAMILY SSF51338 350 404 5.32E-17 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 Gene3D G3DSA:3.20.20.140 81 350 6.5E-34 T 23-04-2016 SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 Hamap MF_00372 Imidazolonepropionase [hutI]. 3 403 40.272 T 23-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 TIGRFAM TIGR01224 hutI: imidazolonepropionase 33 402 1.1E-132 T 23-04-2016 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|UniPathway: UPA00379 SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 Gene3D G3DSA:2.30.40.10 351 403 5.7E-7 T 23-04-2016 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 SHYC_RS02700 5d929ce01e0d2e5aa540c312edfe12fa 411 PANTHER PTHR22642 4 407 1.6E-136 T 23-04-2016 SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 38 339 2.1E-90 T 23-04-2016 IPR013148 Glycosyl hydrolase family 32, N-terminal SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 Gene3D G3DSA:2.115.10.20 44 323 5.5E-13 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 SUPERFAMILY SSF75005 29 339 2.2E-95 T 23-04-2016 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 SMART SM00640 38 455 3.2E-120 T 23-04-2016 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 PANTHER PTHR30175 31 496 1.1E-169 T 23-04-2016 SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 385 455 2.6E-11 T 23-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 23 465 1.9E-169 T 23-04-2016 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26|UniPathway: UPA00238 SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 Gene3D G3DSA:2.60.120.560 324 483 1.6E-33 T 23-04-2016 IPR013189 Glycosyl hydrolase family 32, C-terminal SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 PANTHER PTHR30175:SF8 31 496 1.1E-169 T 23-04-2016 SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 38 51 - T 23-04-2016 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 SHYC_RS03985 c2346a295be9988af58ba55fb8f210e7 499 SUPERFAMILY SSF49899 343 484 3.56E-26 T 23-04-2016 IPR013320 Concanavalin A-like lectin/glucanase domain SHYC_RS10890 d7efab95cf4b6bca679c8384d5aef5fe 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SHYC_RS10890 d7efab95cf4b6bca679c8384d5aef5fe 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 132 1.5E-40 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SHYC_RS10890 d7efab95cf4b6bca679c8384d5aef5fe 159 SUPERFAMILY SSF55083 1 149 5.62E-56 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SHYC_RS10890 d7efab95cf4b6bca679c8384d5aef5fe 159 Gene3D G3DSA:3.30.70.560 4 149 7.6E-59 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SHYC_RS10890 d7efab95cf4b6bca679c8384d5aef5fe 159 PANTHER PTHR20941 1 149 1.6E-75 T 23-04-2016 SHYC_RS10890 d7efab95cf4b6bca679c8384d5aef5fe 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 132 4.5E-49 T 23-04-2016 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|UniPathway: UPA00077 SHYC_RS03050 a5cd8c149c6561b8158cef833f7ec7df 444 PANTHER PTHR11119 1 432 1.6E-154 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS03050 a5cd8c149c6561b8158cef833f7ec7df 444 PIRSF PIRSF005353 1 444 1.9E-169 T 23-04-2016 IPR026033 Purine permease PbuG-like SHYC_RS03050 a5cd8c149c6561b8158cef833f7ec7df 444 PANTHER PTHR11119:SF9 1 432 1.6E-154 T 23-04-2016 IPR029940 AzgA purine transporter GO:0005345|GO:0006863 SHYC_RS03050 a5cd8c149c6561b8158cef833f7ec7df 444 Pfam PF00860 Permease family 17 404 1.7E-42 T 23-04-2016 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 SHYC_RS10595 f23ff0ee965aab8e3a4d6280f2c2ca34 221 PIRSF PIRSF000705 2 218 1.3E-60 T 23-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 SHYC_RS10595 f23ff0ee965aab8e3a4d6280f2c2ca34 221 PANTHER PTHR10513:SF17 9 220 1.6E-93 T 23-04-2016 SHYC_RS10595 f23ff0ee965aab8e3a4d6280f2c2ca34 221 Gene3D G3DSA:3.40.50.300 11 208 8.3E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10595 f23ff0ee965aab8e3a4d6280f2c2ca34 221 SUPERFAMILY SSF52540 10 210 1.43E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10595 f23ff0ee965aab8e3a4d6280f2c2ca34 221 PANTHER PTHR10513 9 220 1.6E-93 T 23-04-2016 SHYC_RS10595 f23ff0ee965aab8e3a4d6280f2c2ca34 221 Pfam PF01712 Deoxynucleoside kinase 12 211 2.4E-61 T 23-04-2016 IPR031314 Deoxynucleoside kinase domain SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 Pfam PF00231 ATP synthase 3 287 4.3E-89 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.7E-34 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 PANTHER PTHR11693 2 288 9.1E-104 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 SUPERFAMILY SSF52943 2 287 1.16E-83 T 23-04-2016 IPR023633 ATPase, F1 complex, gamma subunit domain SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 Gene3D G3DSA:1.10.287.80 236 282 6.7E-30 T 23-04-2016 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 Gene3D G3DSA:3.40.1380.10 64 192 1.3E-37 T 23-04-2016 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 Gene3D G3DSA:1.10.287.80 19 60 1.8E-30 T 23-04-2016 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 Gene3D G3DSA:1.10.287.80 202 235 1.8E-30 T 23-04-2016 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 34.383 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS03675 f18b726342d4c0ee71ccd2e65974155e 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 287 1.2E-99 T 23-04-2016 IPR000131 ATPase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933|GO:0046961 SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 Gene3D G3DSA:1.10.287.130 169 226 1.5E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 SMART SM00387 279 383 2.9E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 PANTHER PTHR24423 169 383 6.7E-47 T 23-04-2016 SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 330 1.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 383 1.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 344 1.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 365 1.4E-15 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 SUPERFAMILY SSF47384 165 235 3.73E-11 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 Pfam PF00512 His Kinase A (phospho-acceptor) domain 176 235 4.7E-8 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 Gene3D G3DSA:3.30.565.10 227 383 8.5E-34 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 SMART SM00388 174 242 4.3E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 283 383 6.1E-22 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS01835 d6a9837657f30c692b3ad55e0c84a132 383 SUPERFAMILY SSF55874 245 383 5.89E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS11885 a85b1e9bbff56dba2ce23d18121764de 370 SUPERFAMILY SSF54328 165 298 1.7E-27 T 23-04-2016 IPR004093 Staphylokinase/Streptokinase GO:0005576|GO:0009405|GO:0031639 SHYC_RS11885 a85b1e9bbff56dba2ce23d18121764de 370 SUPERFAMILY SSF54328 38 155 1.37E-33 T 23-04-2016 IPR004093 Staphylokinase/Streptokinase GO:0005576|GO:0009405|GO:0031639 SHYC_RS11885 a85b1e9bbff56dba2ce23d18121764de 370 Gene3D G3DSA:3.10.20.130 41 154 1.7E-30 T 23-04-2016 SHYC_RS03860 e695691656b96195ec1a600b7808cf04 150 PANTHER PTHR41243 2 150 4.5E-62 T 23-04-2016 SHYC_RS03860 e695691656b96195ec1a600b7808cf04 150 Pfam PF10263 SprT-like family 13 147 2.0E-23 T 23-04-2016 IPR006640 SprT-like SHYC_RS03860 e695691656b96195ec1a600b7808cf04 150 PANTHER PTHR41243:SF1 2 150 4.5E-62 T 23-04-2016 SHYC_RS03860 e695691656b96195ec1a600b7808cf04 150 SMART SM00731 4 147 8.2E-52 T 23-04-2016 IPR006640 SprT-like SHYC_RS07725 18e4d51aee8a26163b61cc49c839443e 127 Pfam PF01022 Bacterial regulatory protein, arsR family 44 89 6.4E-12 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS07725 18e4d51aee8a26163b61cc49c839443e 127 Gene3D G3DSA:1.10.10.10 7 117 9.9E-29 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07725 18e4d51aee8a26163b61cc49c839443e 127 PANTHER PTHR33154 18 126 5.8E-17 T 23-04-2016 SHYC_RS07725 18e4d51aee8a26163b61cc49c839443e 127 SMART SM00418 35 114 7.4E-25 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS07725 18e4d51aee8a26163b61cc49c839443e 127 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 59 77 - T 23-04-2016 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 SHYC_RS07725 18e4d51aee8a26163b61cc49c839443e 127 SUPERFAMILY SSF46785 26 114 5.1E-22 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07725 18e4d51aee8a26163b61cc49c839443e 127 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 3.2E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS07725 18e4d51aee8a26163b61cc49c839443e 127 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 68 3.2E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS07725 18e4d51aee8a26163b61cc49c839443e 127 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 85 100 3.2E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS07725 18e4d51aee8a26163b61cc49c839443e 127 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 70 85 3.2E-17 T 23-04-2016 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 SHYC_RS00135 a84b876de153df7bd5329fcba2c46f94 655 PANTHER PTHR12112:SF18 11 519 1.4E-145 T 23-04-2016 SHYC_RS00135 a84b876de153df7bd5329fcba2c46f94 655 PANTHER PTHR12112:SF18 629 641 1.4E-145 T 23-04-2016 SHYC_RS00135 a84b876de153df7bd5329fcba2c46f94 655 SUPERFAMILY SSF64182 336 639 2.49E-66 T 23-04-2016 SHYC_RS00135 a84b876de153df7bd5329fcba2c46f94 655 Gene3D G3DSA:3.90.1640.10 336 530 2.5E-39 T 23-04-2016 SHYC_RS00135 a84b876de153df7bd5329fcba2c46f94 655 PANTHER PTHR12112 11 519 1.4E-145 T 23-04-2016 SHYC_RS00135 a84b876de153df7bd5329fcba2c46f94 655 PANTHER PTHR12112 629 641 1.4E-145 T 23-04-2016 SHYC_RS00135 a84b876de153df7bd5329fcba2c46f94 655 SMART SM00267 130 297 1.6E-4 T 23-04-2016 IPR000160 GGDEF domain SHYC_RS00135 a84b876de153df7bd5329fcba2c46f94 655 PIRSF PIRSF026583 1 655 2.1E-253 T 23-04-2016 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA SHYC_RS00135 a84b876de153df7bd5329fcba2c46f94 655 Pfam PF02272 DHHA1 domain 588 643 4.1E-5 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SHYC_RS00135 a84b876de153df7bd5329fcba2c46f94 655 Pfam PF01368 DHH family 337 494 3.8E-21 T 23-04-2016 IPR001667 DDH domain SHYC_RS00865 6e00e4e4a2d02d7eb2b765d1af23dd79 166 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 73 163 5.0E-28 T 23-04-2016 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 SHYC_RS00865 6e00e4e4a2d02d7eb2b765d1af23dd79 166 PANTHER PTHR12714 5 163 1.0E-11 T 23-04-2016 SHYC_RS00865 6e00e4e4a2d02d7eb2b765d1af23dd79 166 PANTHER PTHR12714:SF8 5 163 1.0E-11 T 23-04-2016 SHYC_RS11485 20f6cd38d7dc8b08777dfe18e8f98c42 483 PANTHER PTHR30595:SF6 1 472 3.0E-47 T 23-04-2016 SHYC_RS11485 20f6cd38d7dc8b08777dfe18e8f98c42 483 Pfam PF13749 Putative ATP-dependent DNA helicase recG C-terminal 316 400 1.4E-20 T 23-04-2016 IPR025831 ATP-dependent DNA helicase RecG, C-terminal domain SHYC_RS11485 20f6cd38d7dc8b08777dfe18e8f98c42 483 Pfam PF04326 Putative DNA-binding domain 19 140 3.8E-16 T 23-04-2016 IPR007421 Schlafen, AAA domain GO:0005524 SHYC_RS11485 20f6cd38d7dc8b08777dfe18e8f98c42 483 PANTHER PTHR30595 1 472 3.0E-47 T 23-04-2016 SHYC_RS10145 831d922188d631eb49f649ada8d6c764 266 SUPERFAMILY SSF53098 101 249 7.28E-23 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS10145 831d922188d631eb49f649ada8d6c764 266 Gene3D G3DSA:3.30.420.10 101 252 3.1E-18 T 23-04-2016 IPR012337 Ribonuclease H-like domain GO:0003676 SHYC_RS10145 831d922188d631eb49f649ada8d6c764 266 PANTHER PTHR32552 1 255 3.5E-44 T 23-04-2016 SHYC_RS10145 831d922188d631eb49f649ada8d6c764 266 Pfam PF13276 HTH-like domain 27 84 3.4E-12 T 23-04-2016 IPR025948 HTH-like domain SHYC_RS10145 831d922188d631eb49f649ada8d6c764 266 Pfam PF00665 Integrase core domain 108 221 1.7E-19 T 23-04-2016 IPR001584 Integrase, catalytic core GO:0015074 SHYC_RS05860 dd7c281f24b3b560fe8f74310e1a1f9f 257 PANTHER PTHR30269 3 256 5.5E-118 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHYC_RS05860 dd7c281f24b3b560fe8f74310e1a1f9f 257 Pfam PF01925 Sulfite exporter TauE/SafE 12 244 5.0E-39 T 23-04-2016 IPR002781 Transmembrane protein TauE-like GO:0016021 SHYC_RS05860 dd7c281f24b3b560fe8f74310e1a1f9f 257 PANTHER PTHR30269:SF13 3 256 5.5E-118 T 23-04-2016 SHYC_RS00545 86014ad07399b6789adf3b216d51fc0d 486 SUPERFAMILY SSF53474 53 304 5.07E-12 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00545 86014ad07399b6789adf3b216d51fc0d 486 Gene3D G3DSA:3.40.50.1820 156 212 7.1E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00545 86014ad07399b6789adf3b216d51fc0d 486 Gene3D G3DSA:3.40.50.1820 42 95 7.1E-6 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS02805 a6cfe08b710645fdc4b2849b6bdbf61a 154 PANTHER PTHR38433:SF1 1 154 3.3E-45 T 23-04-2016 SHYC_RS02805 a6cfe08b710645fdc4b2849b6bdbf61a 154 PANTHER PTHR38433 1 154 3.3E-45 T 23-04-2016 SHYC_RS02805 a6cfe08b710645fdc4b2849b6bdbf61a 154 Pfam PF07849 Protein of unknown function (DUF1641) 118 154 8.9E-10 T 23-04-2016 IPR012440 Protein of unknown function DUF1641 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 SUPERFAMILY SSF54713 151 292 1.44E-50 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 SUPERFAMILY SSF46934 1 55 6.45E-21 T 23-04-2016 IPR009060 UBA-like GO:0005515 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 Gene3D G3DSA:1.10.286.20 195 237 2.2E-22 T 23-04-2016 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 Gene3D G3DSA:3.30.479.20 152 189 1.1E-27 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 Gene3D G3DSA:3.30.479.20 238 273 1.1E-27 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 Gene3D G3DSA:1.10.8.10 1 54 2.5E-29 T 23-04-2016 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 80.444 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 Pfam PF00889 Elongation factor TS 70 274 3.0E-76 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 292 2.4E-114 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 Gene3D G3DSA:3.30.479.20 56 142 1.4E-20 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 PANTHER PTHR11741 1 292 4.3E-139 T 23-04-2016 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 23-04-2016 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 SHYC_RS07895 417ec29f5ec6d6f22abeda074d53b9fb 292 SUPERFAMILY SSF54713 55 143 4.58E-21 T 23-04-2016 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 SHYC_RS02435 cc0b893a0b0571923a9e758d626224ea 357 Pfam PF05343 M42 glutamyl aminopeptidase 45 339 3.9E-108 T 23-04-2016 IPR008007 Peptidase M42 SHYC_RS02435 cc0b893a0b0571923a9e758d626224ea 357 SUPERFAMILY SSF101821 70 180 1.11E-33 T 23-04-2016 SHYC_RS02435 cc0b893a0b0571923a9e758d626224ea 357 SUPERFAMILY SSF53187 4 80 1.79E-65 T 23-04-2016 SHYC_RS02435 cc0b893a0b0571923a9e758d626224ea 357 SUPERFAMILY SSF53187 172 355 1.79E-65 T 23-04-2016 SHYC_RS02435 cc0b893a0b0571923a9e758d626224ea 357 PANTHER PTHR32481 1 357 1.7E-193 T 23-04-2016 SHYC_RS02435 cc0b893a0b0571923a9e758d626224ea 357 PIRSF PIRSF001123 1 357 4.2E-139 T 23-04-2016 IPR008007 Peptidase M42 SHYC_RS02435 cc0b893a0b0571923a9e758d626224ea 357 PANTHER PTHR32481:SF11 1 357 1.7E-193 T 23-04-2016 SHYC_RS02435 cc0b893a0b0571923a9e758d626224ea 357 Gene3D G3DSA:3.40.630.10 169 356 4.4E-80 T 23-04-2016 SHYC_RS02435 cc0b893a0b0571923a9e758d626224ea 357 Gene3D G3DSA:3.40.630.10 1 71 4.4E-80 T 23-04-2016 SHYC_RS02435 cc0b893a0b0571923a9e758d626224ea 357 Gene3D G3DSA:2.40.30.40 72 161 7.3E-38 T 23-04-2016 IPR023367 Peptidase M42, domain 2 SHYC_RS11355 e9e59c20263714033d9fcc6c22e25553 288 PANTHER PTHR30465:SF2 3 275 2.2E-94 T 23-04-2016 SHYC_RS11355 e9e59c20263714033d9fcc6c22e25553 288 Gene3D G3DSA:1.10.3720.10 66 269 5.7E-23 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS11355 e9e59c20263714033d9fcc6c22e25553 288 SUPERFAMILY SSF161098 68 256 3.92E-26 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS11355 e9e59c20263714033d9fcc6c22e25553 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 274 2.9E-27 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS11355 e9e59c20263714033d9fcc6c22e25553 288 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 3 45 2.5E-5 T 23-04-2016 IPR025966 Oligopeptide transport permease C-like, N-terminal domain SHYC_RS11355 e9e59c20263714033d9fcc6c22e25553 288 PANTHER PTHR30465 3 275 2.2E-94 T 23-04-2016 SHYC_RS00085 7df98c559d4286723cd428a83d1cdac8 101 PANTHER PTHR35344 1 89 7.4E-14 T 23-04-2016 SHYC_RS00085 7df98c559d4286723cd428a83d1cdac8 101 ProSitePatterns PS00234 Gas vesicles protein GVPa signature 1. 15 29 - T 23-04-2016 IPR018493 Gas vesicle protein GvpA, conserved site GO:0005198|GO:0012506 SHYC_RS00085 7df98c559d4286723cd428a83d1cdac8 101 Pfam PF00741 Gas vesicle protein 15 52 1.9E-14 T 23-04-2016 IPR000638 Gas vesicle protein GvpA GO:0005198|GO:0012506 SHYC_RS10985 7503947c50b69146d5a6539bc5552d0c 126 PANTHER PTHR11803 1 126 8.5E-60 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family SHYC_RS10985 7503947c50b69146d5a6539bc5552d0c 126 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 122 6.0E-53 T 23-04-2016 IPR006056 RidA family SHYC_RS10985 7503947c50b69146d5a6539bc5552d0c 126 SUPERFAMILY SSF55298 2 124 3.3E-49 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SHYC_RS10985 7503947c50b69146d5a6539bc5552d0c 126 Pfam PF01042 Endoribonuclease L-PSP 7 123 5.1E-46 T 23-04-2016 IPR006175 YjgF/YER057c/UK114 family SHYC_RS10985 7503947c50b69146d5a6539bc5552d0c 126 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 23-04-2016 IPR019897 RidA, conserved site SHYC_RS10985 7503947c50b69146d5a6539bc5552d0c 126 Gene3D G3DSA:3.30.1330.40 2 121 1.2E-49 T 23-04-2016 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 Gene3D G3DSA:3.90.45.10 5 156 9.1E-47 T 23-04-2016 IPR023635 Peptide deformylase SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 Hamap MF_00163 Peptide deformylase [def]. 2 158 24.216 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 PRINTS PR01576 Peptide deformylase signature 119 148 2.9E-26 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 PRINTS PR01576 Peptide deformylase signature 100 118 2.9E-26 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 PRINTS PR01576 Peptide deformylase signature 88 99 2.9E-26 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 PRINTS PR01576 Peptide deformylase signature 33 62 2.9E-26 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 SUPERFAMILY SSF56420 1 151 4.58E-47 T 23-04-2016 IPR023635 Peptide deformylase SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 PANTHER PTHR10458 1 162 9.5E-45 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 Pfam PF01327 Polypeptide deformylase 3 149 4.5E-43 T 23-04-2016 IPR023635 Peptide deformylase SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 PIRSF PIRSF004749 1 162 1.2E-46 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS08130 a94e251e9e7e9751fc8122eb75492b57 162 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 156 5.2E-40 T 23-04-2016 IPR000181 Formylmethionine deformylase GO:0005506|GO:0042586 SHYC_RS04715 8922955a307d7251da5904b5951116d8 106 Pfam PF04688 SPP1 phage holin 1 71 4.9E-12 T 23-04-2016 IPR006479 Holin SHYC_RS04715 8922955a307d7251da5904b5951116d8 106 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 1 75 1.1E-14 T 23-04-2016 IPR006479 Holin SHYC_RS04715 8922955a307d7251da5904b5951116d8 106 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 1 70 2.0E-7 T 23-04-2016 IPR006479 Holin SHYC_RS08800 2f412796c39e1df7d1e6e22be4167025 449 SUPERFAMILY SSF53756 113 428 2.62E-36 T 23-04-2016 SHYC_RS08800 2f412796c39e1df7d1e6e22be4167025 449 SUPERFAMILY SSF53756 18 61 2.62E-36 T 23-04-2016 SHYC_RS08800 2f412796c39e1df7d1e6e22be4167025 449 PANTHER PTHR12526 139 430 8.2E-22 T 23-04-2016 SHYC_RS08800 2f412796c39e1df7d1e6e22be4167025 449 PANTHER PTHR12526 25 62 8.2E-22 T 23-04-2016 SHYC_RS08800 2f412796c39e1df7d1e6e22be4167025 449 PANTHER PTHR12526 89 118 8.2E-22 T 23-04-2016 SHYC_RS08800 2f412796c39e1df7d1e6e22be4167025 449 Gene3D G3DSA:3.40.50.2000 228 405 7.0E-10 T 23-04-2016 SHYC_RS08800 2f412796c39e1df7d1e6e22be4167025 449 PANTHER PTHR12526:SF320 139 430 8.2E-22 T 23-04-2016 SHYC_RS08800 2f412796c39e1df7d1e6e22be4167025 449 PANTHER PTHR12526:SF320 25 62 8.2E-22 T 23-04-2016 SHYC_RS08800 2f412796c39e1df7d1e6e22be4167025 449 PANTHER PTHR12526:SF320 89 118 8.2E-22 T 23-04-2016 SHYC_RS08800 2f412796c39e1df7d1e6e22be4167025 449 Pfam PF00534 Glycosyl transferases group 1 241 407 5.2E-16 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 SHYC_RS06605 951e2f362e34d67500e0b2bff19fb2cb 292 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 21 289 3.1E-85 T 23-04-2016 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 SHYC_RS06605 951e2f362e34d67500e0b2bff19fb2cb 292 PANTHER PTHR30425 2 292 2.7E-133 T 23-04-2016 SHYC_RS06605 951e2f362e34d67500e0b2bff19fb2cb 292 Gene3D G3DSA:1.10.3720.10 19 291 1.6E-43 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS06605 951e2f362e34d67500e0b2bff19fb2cb 292 PANTHER PTHR30425:SF2 2 292 2.7E-133 T 23-04-2016 SHYC_RS06605 951e2f362e34d67500e0b2bff19fb2cb 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 287 1.3E-25 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS06605 951e2f362e34d67500e0b2bff19fb2cb 292 SUPERFAMILY SSF161098 20 281 1.03E-37 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09580 055e034a61f6913d312d8c6425c6f0e1 338 Gene3D G3DSA:3.40.50.1360 96 337 5.1E-87 T 23-04-2016 SHYC_RS09580 055e034a61f6913d312d8c6425c6f0e1 338 PANTHER PTHR34294 87 337 2.4E-130 T 23-04-2016 SHYC_RS09580 055e034a61f6913d312d8c6425c6f0e1 338 Gene3D G3DSA:1.10.10.10 2 92 6.3E-26 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS09580 055e034a61f6913d312d8c6425c6f0e1 338 Pfam PF04198 Putative sugar-binding domain 91 336 1.4E-68 T 23-04-2016 IPR007324 Sugar-binding domain, putative GO:0030246 SHYC_RS09580 055e034a61f6913d312d8c6425c6f0e1 338 SUPERFAMILY SSF100950 96 336 3.1E-63 T 23-04-2016 SHYC_RS09580 055e034a61f6913d312d8c6425c6f0e1 338 PANTHER PTHR34294:SF5 2 67 2.4E-130 T 23-04-2016 SHYC_RS09580 055e034a61f6913d312d8c6425c6f0e1 338 PANTHER PTHR34294:SF5 87 337 2.4E-130 T 23-04-2016 SHYC_RS09580 055e034a61f6913d312d8c6425c6f0e1 338 SUPERFAMILY SSF46785 19 84 2.21E-9 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS09580 055e034a61f6913d312d8c6425c6f0e1 338 PANTHER PTHR34294 2 67 2.4E-130 T 23-04-2016 SHYC_RS10765 fd4396688ad65177aa5263fc77d70db5 173 Gene3D G3DSA:4.10.860.10 127 167 3.7E-6 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS10765 fd4396688ad65177aa5263fc77d70db5 173 PANTHER PTHR38430 28 173 3.8E-38 T 23-04-2016 SHYC_RS10765 fd4396688ad65177aa5263fc77d70db5 173 Pfam PF02151 UvrB/uvrC motif 130 164 7.8E-8 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS10765 fd4396688ad65177aa5263fc77d70db5 173 SUPERFAMILY SSF46600 126 166 2.22E-6 T 23-04-2016 IPR001943 UVR domain GO:0005515 SHYC_RS10885 ccbc7033d1a565aa8db246ba01a1cb7a 331 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 5.1E-104 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SHYC_RS10885 ccbc7033d1a565aa8db246ba01a1cb7a 331 Gene3D G3DSA:3.20.20.70 8 245 1.0E-85 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS10885 ccbc7033d1a565aa8db246ba01a1cb7a 331 PANTHER PTHR11082:SF25 3 328 2.7E-146 T 23-04-2016 SHYC_RS10885 ccbc7033d1a565aa8db246ba01a1cb7a 331 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 320 6.1E-128 T 23-04-2016 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 SHYC_RS10885 ccbc7033d1a565aa8db246ba01a1cb7a 331 PIRSF PIRSF006621 1 330 5.4E-106 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SHYC_RS10885 ccbc7033d1a565aa8db246ba01a1cb7a 331 PANTHER PTHR11082 3 328 2.7E-146 T 23-04-2016 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 SHYC_RS10885 ccbc7033d1a565aa8db246ba01a1cb7a 331 Gene3D G3DSA:1.10.1200.80 254 327 1.0E-26 T 23-04-2016 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 SHYC_RS10885 ccbc7033d1a565aa8db246ba01a1cb7a 331 SUPERFAMILY SSF51395 11 321 3.59E-91 T 23-04-2016 SHYC_RS10885 ccbc7033d1a565aa8db246ba01a1cb7a 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 23-04-2016 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 SHYC_RS07415 0608975d887350babf4be0b4333d4383 99 SUPERFAMILY SSF89360 2 83 9.81E-9 T 23-04-2016 IPR000361 FeS cluster biogenesis SHYC_RS07415 0608975d887350babf4be0b4333d4383 99 PANTHER PTHR41285 2 98 1.3E-21 T 23-04-2016 SHYC_RS07415 0608975d887350babf4be0b4333d4383 99 PANTHER PTHR41285:SF1 2 98 1.3E-21 T 23-04-2016 SHYC_RS11150 b9dfb46534255a3da1718210db4cbac0 260 Pfam PF07907 YibE/F-like protein 5 244 1.3E-67 T 23-04-2016 IPR012507 YibE/F-like SHYC_RS11150 b9dfb46534255a3da1718210db4cbac0 260 PIRSF PIRSF031503 1 255 1.4E-96 T 23-04-2016 IPR014564 Uncharacterised conserved protein UCP031503, transmembrane SHYC_RS11150 b9dfb46534255a3da1718210db4cbac0 260 PANTHER PTHR41771 1 260 6.9E-74 T 23-04-2016 SHYC_RS11150 b9dfb46534255a3da1718210db4cbac0 260 PANTHER PTHR41771:SF1 1 260 6.9E-74 T 23-04-2016 SHYC_RS04370 323d4c1814f98dc51443f7dc9684b510 268 Pfam PF02631 RecX family 84 203 7.6E-21 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SHYC_RS04370 323d4c1814f98dc51443f7dc9684b510 268 Hamap MF_01114 Regulatory protein RecX [recX]. 42 208 14.323 T 23-04-2016 IPR003783 Regulatory protein RecX GO:0006282 SHYC_RS04370 323d4c1814f98dc51443f7dc9684b510 268 PANTHER PTHR33602 1 227 5.7E-37 T 23-04-2016 SHYC_RS04370 323d4c1814f98dc51443f7dc9684b510 268 PANTHER PTHR33602:SF1 1 227 5.7E-37 T 23-04-2016 SHYC_RS04370 323d4c1814f98dc51443f7dc9684b510 268 Gene3D G3DSA:1.10.10.10 62 106 5.7E-5 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07330 7bb285a66bc488dc356fd3bd3cf05904 419 SUPERFAMILY SSF55729 1 166 2.81E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07330 7bb285a66bc488dc356fd3bd3cf05904 419 Pfam PF02388 FemAB family 6 412 1.4E-135 T 23-04-2016 IPR003447 FemABX peptidyl transferase GO:0009252|GO:0016755 SHYC_RS07330 7bb285a66bc488dc356fd3bd3cf05904 419 PANTHER PTHR36174 1 419 1.2E-206 T 23-04-2016 SHYC_RS07330 7bb285a66bc488dc356fd3bd3cf05904 419 Gene3D G3DSA:3.40.630.30 308 387 3.5E-50 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07330 7bb285a66bc488dc356fd3bd3cf05904 419 Gene3D G3DSA:3.40.630.30 168 245 3.5E-50 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07330 7bb285a66bc488dc356fd3bd3cf05904 419 Gene3D G3DSA:3.40.630.30 1 167 2.6E-44 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07330 7bb285a66bc488dc356fd3bd3cf05904 419 PANTHER PTHR36174:SF2 1 419 1.2E-206 T 23-04-2016 SHYC_RS07330 7bb285a66bc488dc356fd3bd3cf05904 419 SUPERFAMILY SSF55729 170 246 6.36E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07330 7bb285a66bc488dc356fd3bd3cf05904 419 SUPERFAMILY SSF55729 309 408 6.36E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS00020 d4378a32fd2b9191c8b7f7a138e72071 73 Pfam PF13275 S4 domain 9 65 1.5E-21 T 23-04-2016 SHYC_RS00020 d4378a32fd2b9191c8b7f7a138e72071 73 PANTHER PTHR32319 1 68 1.3E-18 T 23-04-2016 SHYC_RS00020 d4378a32fd2b9191c8b7f7a138e72071 73 SUPERFAMILY SSF55174 8 67 1.6E-15 T 23-04-2016 SHYC_RS00020 d4378a32fd2b9191c8b7f7a138e72071 73 Gene3D G3DSA:3.10.290.10 10 68 1.1E-20 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS00020 d4378a32fd2b9191c8b7f7a138e72071 73 PANTHER PTHR32319:SF3 1 68 1.3E-18 T 23-04-2016 SHYC_RS00755 7b2588ef700add112a6027f189d1d58f 167 Pfam PF05656 Protein of unknown function (DUF805) 19 152 1.9E-17 T 23-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 SHYC_RS05645 1f244a89bf45988c77df6e993c80edf3 393 PANTHER PTHR23517:SF3 3 388 1.4E-162 T 23-04-2016 SHYC_RS05645 1f244a89bf45988c77df6e993c80edf3 393 Gene3D G3DSA:1.20.1250.20 206 386 2.0E-27 T 23-04-2016 SHYC_RS05645 1f244a89bf45988c77df6e993c80edf3 393 Gene3D G3DSA:1.20.1250.20 5 177 1.2E-19 T 23-04-2016 SHYC_RS05645 1f244a89bf45988c77df6e993c80edf3 393 SUPERFAMILY SSF103473 5 390 3.66E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS05645 1f244a89bf45988c77df6e993c80edf3 393 Pfam PF07690 Major Facilitator Superfamily 10 228 1.3E-20 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS05645 1f244a89bf45988c77df6e993c80edf3 393 PANTHER PTHR23517 3 388 1.4E-162 T 23-04-2016 SHYC_RS10715 b6cddc4106b0fa8874bbe810312b8b78 133 PIRSF PIRSF005520 1 133 5.0E-48 T 23-04-2016 IPR008226 Mini-ribonuclease 3 family SHYC_RS10715 b6cddc4106b0fa8874bbe810312b8b78 133 Gene3D G3DSA:1.10.1520.10 4 132 1.1E-48 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SHYC_RS10715 b6cddc4106b0fa8874bbe810312b8b78 133 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 4 130 27.569 T 23-04-2016 IPR008226 Mini-ribonuclease 3 family SHYC_RS10715 b6cddc4106b0fa8874bbe810312b8b78 133 SUPERFAMILY SSF69065 6 130 3.14E-41 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SHYC_RS10715 b6cddc4106b0fa8874bbe810312b8b78 133 Pfam PF00636 Ribonuclease III domain 14 113 7.9E-17 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SHYC_RS10715 b6cddc4106b0fa8874bbe810312b8b78 133 SMART SM00535 2 133 6.4E-4 T 23-04-2016 IPR000999 Ribonuclease III domain GO:0003723|GO:0004525|GO:0006396 SHYC_RS10715 b6cddc4106b0fa8874bbe810312b8b78 133 PANTHER PTHR34276 8 132 3.5E-50 T 23-04-2016 SHYC_RS00965 1b091f6a7eeaa3aa616f7e33f6815c74 574 PANTHER PTHR30480 14 560 5.1E-73 T 23-04-2016 SHYC_RS00965 1b091f6a7eeaa3aa616f7e33f6815c74 574 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 31 357 1.2E-57 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SHYC_RS00965 1b091f6a7eeaa3aa616f7e33f6815c74 574 SUPERFAMILY SSF51445 14 397 2.32E-77 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily SHYC_RS00965 1b091f6a7eeaa3aa616f7e33f6815c74 574 Gene3D G3DSA:3.20.20.300 58 369 1.4E-75 T 23-04-2016 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 SHYC_RS00965 1b091f6a7eeaa3aa616f7e33f6815c74 574 PANTHER PTHR30480:SF5 14 560 5.1E-73 T 23-04-2016 SHYC_RS02450 805708148730fc30689c50a2dcc4c071 72 Gene3D G3DSA:1.10.150.260 1 68 6.9E-10 T 23-04-2016 IPR023089 YozE SAM-like domain SHYC_RS02450 805708148730fc30689c50a2dcc4c071 72 Pfam PF06855 YozE SAM-like fold 2 66 4.0E-14 T 23-04-2016 IPR023089 YozE SAM-like domain SHYC_RS02450 805708148730fc30689c50a2dcc4c071 72 SUPERFAMILY SSF140652 1 68 8.76E-16 T 23-04-2016 IPR023089 YozE SAM-like domain SHYC_RS10640 5b307e61d42a2fe3d5718be34bb03f07 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 23-04-2016 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 SHYC_RS10640 5b307e61d42a2fe3d5718be34bb03f07 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.5E-69 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SHYC_RS10640 5b307e61d42a2fe3d5718be34bb03f07 156 SUPERFAMILY SSF47973 4 149 1.22E-60 T 23-04-2016 IPR023798 Ribosomal protein S7 domain SHYC_RS10640 5b307e61d42a2fe3d5718be34bb03f07 156 Gene3D G3DSA:1.10.455.10 7 156 4.4E-66 T 23-04-2016 IPR023798 Ribosomal protein S7 domain SHYC_RS10640 5b307e61d42a2fe3d5718be34bb03f07 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 4.0E-67 T 23-04-2016 IPR023798 Ribosomal protein S7 domain SHYC_RS10640 5b307e61d42a2fe3d5718be34bb03f07 156 PIRSF PIRSF002122 3 156 4.8E-58 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SHYC_RS10640 5b307e61d42a2fe3d5718be34bb03f07 156 PANTHER PTHR11205 1 156 2.3E-93 T 23-04-2016 IPR000235 Ribosomal protein S5/S7 GO:0006412 SHYC_RS10640 5b307e61d42a2fe3d5718be34bb03f07 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.974 T 23-04-2016 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 SHYC_RS10170 e4c4a1a70eaa7b81b1a328a1b1b13d3a 168 Pfam PF13420 Acetyltransferase (GNAT) domain 5 162 3.3E-16 T 23-04-2016 SHYC_RS10170 e4c4a1a70eaa7b81b1a328a1b1b13d3a 168 PANTHER PTHR23091 1 167 1.9E-24 T 23-04-2016 SHYC_RS10170 e4c4a1a70eaa7b81b1a328a1b1b13d3a 168 SUPERFAMILY SSF55729 1 166 3.66E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10170 e4c4a1a70eaa7b81b1a328a1b1b13d3a 168 Gene3D G3DSA:3.40.630.30 1 167 4.0E-39 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10170 e4c4a1a70eaa7b81b1a328a1b1b13d3a 168 PANTHER PTHR23091:SF248 1 167 1.9E-24 T 23-04-2016 SHYC_RS01585 9699ebab54b95ec947a91330deabdf93 554 PANTHER PTHR30047:SF5 1 554 2.5E-273 T 23-04-2016 SHYC_RS01585 9699ebab54b95ec947a91330deabdf93 554 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 22 517 2.5E-155 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SHYC_RS01585 9699ebab54b95ec947a91330deabdf93 554 PANTHER PTHR30047 1 554 2.5E-273 T 23-04-2016 SHYC_RS01585 9699ebab54b95ec947a91330deabdf93 554 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 62 518 6.4E-143 T 23-04-2016 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 SHYC_RS11035 40a13940c7403e696a7c62bce292864b 241 PANTHER PTHR18895:SF75 6 236 1.4E-93 T 23-04-2016 SHYC_RS11035 40a13940c7403e696a7c62bce292864b 241 Gene3D G3DSA:3.40.50.150 30 240 2.3E-71 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS11035 40a13940c7403e696a7c62bce292864b 241 Pfam PF05175 Methyltransferase small domain 18 170 1.0E-14 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SHYC_RS11035 40a13940c7403e696a7c62bce292864b 241 SUPERFAMILY SSF53335 12 195 5.63E-29 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS11035 40a13940c7403e696a7c62bce292864b 241 PANTHER PTHR18895 6 236 1.4E-93 T 23-04-2016 SHYC_RS04135 f8d977f99443be0754ba0a5c38873d6e 93 PANTHER PTHR31435:SF3 1 91 1.0E-19 T 23-04-2016 SHYC_RS04135 f8d977f99443be0754ba0a5c38873d6e 93 SUPERFAMILY SSF55729 3 90 1.03E-22 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS04135 f8d977f99443be0754ba0a5c38873d6e 93 Pfam PF14542 GCN5-related N-acetyl-transferase 12 89 3.5E-21 T 23-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase SHYC_RS04135 f8d977f99443be0754ba0a5c38873d6e 93 PANTHER PTHR31435 1 91 1.0E-19 T 23-04-2016 SHYC_RS04135 f8d977f99443be0754ba0a5c38873d6e 93 Gene3D G3DSA:3.40.630.30 6 90 1.6E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS09255 f68b9cd920ed430867f9477d7b1d85c4 129 SMART SM00316 7 77 2.5E-21 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS09255 f68b9cd920ed430867f9477d7b1d85c4 129 SUPERFAMILY SSF50249 4 78 1.19E-20 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09255 f68b9cd920ed430867f9477d7b1d85c4 129 Gene3D G3DSA:2.40.50.140 4 78 3.7E-23 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09255 f68b9cd920ed430867f9477d7b1d85c4 129 PANTHER PTHR10724:SF8 5 129 1.3E-51 T 23-04-2016 SHYC_RS09255 f68b9cd920ed430867f9477d7b1d85c4 129 PANTHER PTHR10724 5 129 1.3E-51 T 23-04-2016 SHYC_RS09255 f68b9cd920ed430867f9477d7b1d85c4 129 Pfam PF00575 S1 RNA binding domain 7 77 8.4E-14 T 23-04-2016 IPR003029 S1 domain GO:0003676 SHYC_RS05120 c99594edc4114e60409a5e23e8e4c7d6 227 Gene3D G3DSA:3.60.21.10 3 54 4.7E-16 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS05120 c99594edc4114e60409a5e23e8e4c7d6 227 Gene3D G3DSA:3.60.21.10 146 199 4.7E-16 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS05120 c99594edc4114e60409a5e23e8e4c7d6 227 Gene3D G3DSA:3.60.21.10 105 106 4.7E-16 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS05120 c99594edc4114e60409a5e23e8e4c7d6 227 SUPERFAMILY SSF56300 4 216 1.11E-15 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS05120 c99594edc4114e60409a5e23e8e4c7d6 227 Pfam PF00149 Calcineurin-like phosphoesterase 3 191 4.9E-9 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHYC_RS05055 fe2efa6d1e988f2d4e35715095b4024e 244 Gene3D G3DSA:2.40.10.10 149 225 1.3E-11 T 23-04-2016 SHYC_RS05055 fe2efa6d1e988f2d4e35715095b4024e 244 Pfam PF00089 Trypsin 55 239 1.7E-9 T 23-04-2016 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 SHYC_RS05055 fe2efa6d1e988f2d4e35715095b4024e 244 Gene3D G3DSA:2.40.10.10 54 119 2.4E-8 T 23-04-2016 SHYC_RS05055 fe2efa6d1e988f2d4e35715095b4024e 244 SUPERFAMILY SSF50494 11 241 6.63E-24 T 23-04-2016 IPR009003 Peptidase S1, PA clan SHYC_RS05055 fe2efa6d1e988f2d4e35715095b4024e 244 PRINTS PR00839 V8 serine protease family signature 59 76 1.3E-10 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05055 fe2efa6d1e988f2d4e35715095b4024e 244 PRINTS PR00839 V8 serine protease family signature 205 217 1.3E-10 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05055 fe2efa6d1e988f2d4e35715095b4024e 244 PRINTS PR00839 V8 serine protease family signature 88 100 1.3E-10 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05055 fe2efa6d1e988f2d4e35715095b4024e 244 PRINTS PR00839 V8 serine protease family signature 152 165 1.3E-10 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS05055 fe2efa6d1e988f2d4e35715095b4024e 244 PRINTS PR00839 V8 serine protease family signature 187 203 1.3E-10 T 23-04-2016 IPR008256 Peptidase S1B GO:0006508|GO:0008236 SHYC_RS08110 7e8b088e492ed08754d3eb2b5f234725 247 SMART SM00332 2 240 1.2E-21 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHYC_RS08110 7e8b088e492ed08754d3eb2b5f234725 247 Gene3D G3DSA:3.60.40.10 3 242 2.1E-61 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHYC_RS08110 7e8b088e492ed08754d3eb2b5f234725 247 Pfam PF13672 Protein phosphatase 2C 15 204 3.1E-15 T 23-04-2016 SHYC_RS08110 7e8b088e492ed08754d3eb2b5f234725 247 SMART SM00331 8 242 8.4E-28 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHYC_RS08110 7e8b088e492ed08754d3eb2b5f234725 247 PANTHER PTHR13832:SF278 1 242 2.2E-55 T 23-04-2016 SHYC_RS08110 7e8b088e492ed08754d3eb2b5f234725 247 SUPERFAMILY SSF81606 3 241 3.14E-58 T 23-04-2016 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04660+3.1.3.16 SHYC_RS08110 7e8b088e492ed08754d3eb2b5f234725 247 PANTHER PTHR13832 1 242 2.2E-55 T 23-04-2016 IPR015655 Protein phosphatase 2C family GO:0004722|GO:0006470 KEGG: 04660+3.1.3.16 SHYC_RS08260 8a44250caf1535402c198a17407d4bed 224 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 3 221 4.9E-44 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 SHYC_RS08260 8a44250caf1535402c198a17407d4bed 224 Pfam PF01168 Alanine racemase, N-terminal domain 26 222 3.7E-18 T 23-04-2016 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383|UniPathway: UPA00042 SHYC_RS08260 8a44250caf1535402c198a17407d4bed 224 PIRSF PIRSF004848 1 224 4.1E-59 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 SHYC_RS08260 8a44250caf1535402c198a17407d4bed 224 SUPERFAMILY SSF51419 1 221 7.46E-67 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS08260 8a44250caf1535402c198a17407d4bed 224 Gene3D G3DSA:3.20.20.10 2 223 3.0E-68 T 23-04-2016 IPR029066 PLP-binding barrel SHYC_RS08260 8a44250caf1535402c198a17407d4bed 224 PANTHER PTHR10146 1 222 2.5E-78 T 23-04-2016 IPR011078 Uncharacterised protein family UPF0001 SHYC_RS10075 f0148d211b1f83d5b7a7ab0713df7d71 150 PANTHER PTHR23091 1 148 1.1E-13 T 23-04-2016 SHYC_RS10075 f0148d211b1f83d5b7a7ab0713df7d71 150 Pfam PF13673 Acetyltransferase (GNAT) domain 40 141 2.4E-9 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS10075 f0148d211b1f83d5b7a7ab0713df7d71 150 SUPERFAMILY SSF55729 4 144 2.06E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10075 f0148d211b1f83d5b7a7ab0713df7d71 150 PANTHER PTHR23091:SF122 1 148 1.1E-13 T 23-04-2016 SHYC_RS10075 f0148d211b1f83d5b7a7ab0713df7d71 150 Gene3D G3DSA:3.40.630.30 4 145 1.9E-20 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07320 bd56c1d6ef89c455941ac3148e69a858 600 PANTHER PTHR11804:SF45 17 600 2.0E-215 T 23-04-2016 SHYC_RS07320 bd56c1d6ef89c455941ac3148e69a858 600 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 8 595 1.1E-185 T 23-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 SHYC_RS07320 bd56c1d6ef89c455941ac3148e69a858 600 PANTHER PTHR11804 17 600 2.0E-215 T 23-04-2016 SHYC_RS07320 bd56c1d6ef89c455941ac3148e69a858 600 SUPERFAMILY SSF55486 54 597 3.13E-90 T 23-04-2016 SHYC_RS07320 bd56c1d6ef89c455941ac3148e69a858 600 Pfam PF08439 Oligopeptidase F 115 180 9.5E-13 T 23-04-2016 IPR013647 Oligopeptidase F, N-terminal domain SHYC_RS07320 bd56c1d6ef89c455941ac3148e69a858 600 Pfam PF01432 Peptidase family M3 201 583 1.8E-37 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SHYC_RS07320 bd56c1d6ef89c455941ac3148e69a858 600 Gene3D G3DSA:3.40.390.10 378 423 1.4E-5 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SHYC_RS02645 5517587fd71924bbab8b17b029afadbd 299 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS02645 5517587fd71924bbab8b17b029afadbd 299 Gene3D G3DSA:3.40.50.300 2 225 2.4E-66 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02645 5517587fd71924bbab8b17b029afadbd 299 PANTHER PTHR24220 4 236 3.1E-129 T 23-04-2016 SHYC_RS02645 5517587fd71924bbab8b17b029afadbd 299 PANTHER PTHR24220:SF450 4 236 3.1E-129 T 23-04-2016 SHYC_RS02645 5517587fd71924bbab8b17b029afadbd 299 SUPERFAMILY SSF52540 3 228 2.2E-59 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02645 5517587fd71924bbab8b17b029afadbd 299 SMART SM00382 27 209 7.9E-11 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS02645 5517587fd71924bbab8b17b029afadbd 299 Pfam PF13732 Domain of unknown function (DUF4162) 212 294 2.5E-11 T 23-04-2016 IPR025302 Domain of unknown function DUF4162 SHYC_RS02645 5517587fd71924bbab8b17b029afadbd 299 Pfam PF00005 ABC transporter 19 158 7.0E-29 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 Pfam PF12161 HsdM N-terminal domain 6 132 2.6E-28 T 23-04-2016 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 PANTHER PTHR30408 20 482 1.6E-161 T 23-04-2016 SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 PANTHER PTHR30408:SF8 20 482 1.6E-161 T 23-04-2016 SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 Gene3D G3DSA:3.40.50.150 142 355 5.2E-40 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 SUPERFAMILY SSF53335 5 502 2.01E-146 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 167 183 1.2E-20 T 23-04-2016 SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 298 322 1.2E-20 T 23-04-2016 SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 264 276 1.2E-20 T 23-04-2016 SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 190 204 1.2E-20 T 23-04-2016 SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 267 273 - T 23-04-2016 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 SHYC_RS00230 53deb3e2bd806d1351864067dd1c4d1a 503 Pfam PF02384 N-6 DNA Methylase 143 463 1.4E-117 T 23-04-2016 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 SHYC_RS02075 a118c6eb33adfd0d3283ec5818d2d7b6 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 128 156 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SHYC_RS02075 a118c6eb33adfd0d3283ec5818d2d7b6 203 SUPERFAMILY SSF51161 25 195 1.03E-37 T 23-04-2016 IPR011004 Trimeric LpxA-like SHYC_RS02075 a118c6eb33adfd0d3283ec5818d2d7b6 203 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 154 2.4E-9 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS02075 a118c6eb33adfd0d3283ec5818d2d7b6 203 PANTHER PTHR23416 19 92 7.2E-71 T 23-04-2016 SHYC_RS02075 a118c6eb33adfd0d3283ec5818d2d7b6 203 PANTHER PTHR23416 111 188 7.2E-71 T 23-04-2016 SHYC_RS02075 a118c6eb33adfd0d3283ec5818d2d7b6 203 Gene3D G3DSA:2.160.10.10 22 197 3.4E-46 T 23-04-2016 SHYC_RS02075 a118c6eb33adfd0d3283ec5818d2d7b6 203 PANTHER PTHR23416:SF64 19 92 7.2E-71 T 23-04-2016 SHYC_RS02075 a118c6eb33adfd0d3283ec5818d2d7b6 203 PANTHER PTHR23416:SF64 111 188 7.2E-71 T 23-04-2016 SHYC_RS07080 9efa886c0418bfefc35defd5f09b7104 110 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 4 103 1.1E-17 T 23-04-2016 IPR014913 Protein of unknown function DUF1798 SHYC_RS07080 9efa886c0418bfefc35defd5f09b7104 110 SUPERFAMILY SSF140415 4 103 2.22E-17 T 23-04-2016 IPR023351 YppE-like domain SHYC_RS07080 9efa886c0418bfefc35defd5f09b7104 110 Gene3D G3DSA:1.20.120.440 3 107 3.7E-19 T 23-04-2016 IPR023351 YppE-like domain SHYC_RS08170 7c67ee2ded73369a08bc57fd17f8ef23 202 Pfam PF00156 Phosphoribosyl transferase domain 44 163 3.7E-19 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHYC_RS08170 7c67ee2ded73369a08bc57fd17f8ef23 202 Gene3D G3DSA:3.40.50.2020 2 200 3.1E-56 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS08170 7c67ee2ded73369a08bc57fd17f8ef23 202 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 202 27.032 T 23-04-2016 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08170 7c67ee2ded73369a08bc57fd17f8ef23 202 PANTHER PTHR19278 1 200 1.8E-67 T 23-04-2016 SHYC_RS08170 7c67ee2ded73369a08bc57fd17f8ef23 202 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 9 176 4.4E-46 T 23-04-2016 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|UniPathway: UPA00070 SHYC_RS08170 7c67ee2ded73369a08bc57fd17f8ef23 202 SUPERFAMILY SSF53271 1 199 4.59E-51 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS09205 2dc2db700a50fd559e019b65fba3faf1 1150 Pfam PF12705 PD-(D/E)XK nuclease superfamily 773 1121 5.5E-49 T 23-04-2016 SHYC_RS09205 2dc2db700a50fd559e019b65fba3faf1 1150 Gene3D G3DSA:3.40.50.300 571 675 3.1E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09205 2dc2db700a50fd559e019b65fba3faf1 1150 Gene3D G3DSA:3.40.50.300 275 375 3.1E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09205 2dc2db700a50fd559e019b65fba3faf1 1150 Pfam PF13361 UvrD-like helicase C-terminal domain 275 656 3.0E-14 T 23-04-2016 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 SHYC_RS09205 2dc2db700a50fd559e019b65fba3faf1 1150 SUPERFAMILY SSF52540 298 683 9.74E-58 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09205 2dc2db700a50fd559e019b65fba3faf1 1150 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 3 1140 0.0 T 23-04-2016 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 SHYC_RS09205 2dc2db700a50fd559e019b65fba3faf1 1150 PANTHER PTHR41262:SF1 1 1140 0.0 T 23-04-2016 SHYC_RS09205 2dc2db700a50fd559e019b65fba3faf1 1150 PANTHER PTHR41262 1 1140 0.0 T 23-04-2016 SHYC_RS09205 2dc2db700a50fd559e019b65fba3faf1 1150 Gene3D G3DSA:3.40.50.300 176 274 3.9E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS09205 2dc2db700a50fd559e019b65fba3faf1 1150 Gene3D G3DSA:3.40.50.300 6 87 3.9E-4 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05340 b4c93889d5eb292c32409ba2eb88dc1b 322 Gene3D G3DSA:3.10.50.40 141 243 5.2E-34 T 23-04-2016 SHYC_RS05340 b4c93889d5eb292c32409ba2eb88dc1b 322 PANTHER PTHR10657 32 300 2.5E-35 T 23-04-2016 SHYC_RS05340 b4c93889d5eb292c32409ba2eb88dc1b 322 SUPERFAMILY SSF54534 139 243 6.17E-27 T 23-04-2016 SHYC_RS05340 b4c93889d5eb292c32409ba2eb88dc1b 322 SUPERFAMILY SSF109998 71 158 1.69E-10 T 23-04-2016 IPR027304 Trigger factor/SurA domain SHYC_RS05340 b4c93889d5eb292c32409ba2eb88dc1b 322 Pfam PF13616 PPIC-type PPIASE domain 135 245 3.2E-26 T 23-04-2016 SHYC_RS11040 4e2b27a9dd4a1a419806491d287c75fe 118 PIRSF PIRSF021439 1 114 2.5E-31 T 23-04-2016 IPR010377 Initiation control protein YabA GO:0006260 SHYC_RS11040 4e2b27a9dd4a1a419806491d287c75fe 118 Pfam PF06156 Protein of unknown function (DUF972) 2 109 4.2E-31 T 23-04-2016 IPR010377 Initiation control protein YabA GO:0006260 SHYC_RS11040 4e2b27a9dd4a1a419806491d287c75fe 118 PANTHER PTHR41240 2 114 1.8E-26 T 23-04-2016 SHYC_RS11380 49acdbf74a34f46a61ddbeb5055d2a30 269 SUPERFAMILY SSF54506 68 267 5.63E-12 T 23-04-2016 SHYC_RS11380 49acdbf74a34f46a61ddbeb5055d2a30 269 Gene3D G3DSA:3.10.310.10 4 120 2.0E-5 T 23-04-2016 SHYC_RS02080 302e1117f01b655d16dd6d158c2444fd 369 PANTHER PTHR12526 83 366 2.5E-13 T 23-04-2016 SHYC_RS02080 302e1117f01b655d16dd6d158c2444fd 369 SUPERFAMILY SSF53756 66 365 5.07E-33 T 23-04-2016 SHYC_RS02080 302e1117f01b655d16dd6d158c2444fd 369 Pfam PF13439 Glycosyltransferase Family 4 71 175 7.9E-12 T 23-04-2016 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain SHYC_RS02080 302e1117f01b655d16dd6d158c2444fd 369 Pfam PF00534 Glycosyl transferases group 1 190 346 4.9E-9 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 SHYC_RS03510 284b48e5b3390b21c1521d8bf0c66aba 117 PANTHER PTHR36974 6 117 9.8E-22 T 23-04-2016 SHYC_RS01770 a2169de46092f1505bc85ddc805b2cf7 470 Gene3D G3DSA:3.90.550.10 4 202 1.1E-41 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS01770 a2169de46092f1505bc85ddc805b2cf7 470 PANTHER PTHR22916:SF32 1 260 1.2E-37 T 23-04-2016 SHYC_RS01770 a2169de46092f1505bc85ddc805b2cf7 470 PANTHER PTHR22916 1 260 1.2E-37 T 23-04-2016 SHYC_RS01770 a2169de46092f1505bc85ddc805b2cf7 470 Pfam PF00535 Glycosyl transferase family 2 9 144 5.7E-28 T 23-04-2016 IPR001173 Glycosyltransferase 2-like SHYC_RS01770 a2169de46092f1505bc85ddc805b2cf7 470 SUPERFAMILY SSF53448 7 221 3.24E-42 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS03340 38c842bcb8031de0e3a7239854e7540b 320 PANTHER PTHR30472:SF2 8 319 2.2E-146 T 23-04-2016 SHYC_RS03340 38c842bcb8031de0e3a7239854e7540b 320 PANTHER PTHR30472 8 319 2.2E-146 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS03340 38c842bcb8031de0e3a7239854e7540b 320 Pfam PF01032 FecCD transport family 15 319 3.2E-89 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS03340 38c842bcb8031de0e3a7239854e7540b 320 Gene3D G3DSA:1.10.3470.10 9 319 5.5E-93 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS03340 38c842bcb8031de0e3a7239854e7540b 320 SUPERFAMILY SSF81345 6 319 6.15E-80 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS02480 56433f1e2d6c85fb781b83b75be4c9d0 555 PANTHER PTHR10010:SF26 1 451 5.6E-132 T 23-04-2016 SHYC_RS02480 56433f1e2d6c85fb781b83b75be4c9d0 555 Pfam PF01895 PhoU domain 349 433 7.5E-5 T 23-04-2016 IPR026022 PhoU domain SHYC_RS02480 56433f1e2d6c85fb781b83b75be4c9d0 555 Pfam PF01895 PhoU domain 454 536 7.3E-8 T 23-04-2016 IPR026022 PhoU domain SHYC_RS02480 56433f1e2d6c85fb781b83b75be4c9d0 555 Gene3D G3DSA:1.20.58.220 339 435 3.2E-6 T 23-04-2016 SHYC_RS02480 56433f1e2d6c85fb781b83b75be4c9d0 555 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 6 315 1.9E-75 T 23-04-2016 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 SHYC_RS02480 56433f1e2d6c85fb781b83b75be4c9d0 555 Pfam PF02690 Na+/Pi-cotransporter 18 153 1.5E-50 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SHYC_RS02480 56433f1e2d6c85fb781b83b75be4c9d0 555 Pfam PF02690 Na+/Pi-cotransporter 147 258 4.8E-23 T 23-04-2016 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: REACT_15518 SHYC_RS02480 56433f1e2d6c85fb781b83b75be4c9d0 555 PANTHER PTHR10010 1 451 5.6E-132 T 23-04-2016 SHYC_RS02480 56433f1e2d6c85fb781b83b75be4c9d0 555 SUPERFAMILY SSF109755 333 538 4.19E-28 T 23-04-2016 SHYC_RS02480 56433f1e2d6c85fb781b83b75be4c9d0 555 Gene3D G3DSA:1.20.58.220 448 542 3.6E-11 T 23-04-2016 SHYC_RS02180 7ae35c854000bec5959a9137c13bef00 759 SUPERFAMILY SSF81442 283 758 2.88E-77 T 23-04-2016 IPR023616 Cytochrome c oxidase, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS02180 7ae35c854000bec5959a9137c13bef00 759 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 289 729 4.3E-64 T 23-04-2016 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|UniPathway: UPA00705 SHYC_RS01620 461c483fabd191cf5ab5febb4c8902e3 234 Pfam PF00977 Histidine biosynthesis protein 3 228 1.0E-64 T 23-04-2016 IPR006062 Histidine biosynthesis GO:0000105 SHYC_RS01620 461c483fabd191cf5ab5febb4c8902e3 234 SUPERFAMILY SSF51366 3 230 3.3E-57 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHYC_RS01620 461c483fabd191cf5ab5febb4c8902e3 234 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 4 230 1.8E-71 T 23-04-2016 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SHYC_RS01620 461c483fabd191cf5ab5febb4c8902e3 234 Gene3D G3DSA:3.20.20.70 3 228 4.8E-65 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS01620 461c483fabd191cf5ab5febb4c8902e3 234 PANTHER PTHR21235 2 223 1.0E-74 T 23-04-2016 SHYC_RS01620 461c483fabd191cf5ab5febb4c8902e3 234 PANTHER PTHR21235:SF15 2 223 1.0E-74 T 23-04-2016 SHYC_RS01620 461c483fabd191cf5ab5febb4c8902e3 234 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 3 234 26.746 T 23-04-2016 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16|UniPathway: UPA00031 SHYC_RS05870 19b8a3c931ee50bf66ab7f8bb9118b99 184 PANTHER PTHR36115 2 182 3.1E-28 T 23-04-2016 SHYC_RS05870 19b8a3c931ee50bf66ab7f8bb9118b99 184 Pfam PF06271 RDD family 37 165 3.3E-23 T 23-04-2016 IPR010432 RDD SHYC_RS05870 19b8a3c931ee50bf66ab7f8bb9118b99 184 PANTHER PTHR36115:SF3 2 182 3.1E-28 T 23-04-2016 SHYC_RS09880 0e83f0cc47a3e0921de6dcca7dcde108 645 PANTHER PTHR10342 608 637 1.1E-183 T 23-04-2016 SHYC_RS09880 0e83f0cc47a3e0921de6dcca7dcde108 645 PANTHER PTHR10342 219 567 1.1E-183 T 23-04-2016 SHYC_RS09880 0e83f0cc47a3e0921de6dcca7dcde108 645 SUPERFAMILY SSF53649 245 637 7.2E-68 T 23-04-2016 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 SHYC_RS09880 0e83f0cc47a3e0921de6dcca7dcde108 645 Gene3D G3DSA:3.40.720.10 247 552 1.0E-30 T 23-04-2016 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 SHYC_RS09880 0e83f0cc47a3e0921de6dcca7dcde108 645 Pfam PF00884 Sulfatase 247 539 2.3E-32 T 23-04-2016 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 SHYC_RS09880 0e83f0cc47a3e0921de6dcca7dcde108 645 PIRSF PIRSF005091 1 624 7.8E-176 T 23-04-2016 IPR012160 Lipoteichoic acid synthase-like KEGG: 00440+2.7.8.-|KEGG: 00513+2.7.8.-|KEGG: 00540+2.7.8.-|KEGG: 00564+2.7.8.-|KEGG: 00600+2.7.8.-|KEGG: 00770+2.7.8.-|UniPathway: UPA00556 SHYC_RS09880 0e83f0cc47a3e0921de6dcca7dcde108 645 PANTHER PTHR10342:SF214 608 637 1.1E-183 T 23-04-2016 SHYC_RS09880 0e83f0cc47a3e0921de6dcca7dcde108 645 PANTHER PTHR10342:SF214 219 567 1.1E-183 T 23-04-2016 SHYC_RS09110 84edec2eab053b9d4266a6a69f3ef661 236 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 229 6.6E-50 T 23-04-2016 IPR008681 Negative regulator of genetic competence, MecA SHYC_RS09110 84edec2eab053b9d4266a6a69f3ef661 236 PANTHER PTHR39161 2 236 6.1E-81 T 23-04-2016 SHYC_RS09110 84edec2eab053b9d4266a6a69f3ef661 236 PIRSF PIRSF029008 1 235 1.6E-63 T 23-04-2016 IPR008681 Negative regulator of genetic competence, MecA SHYC_RS09110 84edec2eab053b9d4266a6a69f3ef661 236 Hamap MF_01124 Adapter protein MecA [mecA]. 1 233 24.451 T 23-04-2016 IPR008681 Negative regulator of genetic competence, MecA SHYC_RS09110 84edec2eab053b9d4266a6a69f3ef661 236 PANTHER PTHR39161:SF1 2 236 6.1E-81 T 23-04-2016 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 SUPERFAMILY SSF48452 150 309 2.47E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 Gene3D G3DSA:1.25.40.10 19 101 4.1E-11 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 SUPERFAMILY SSF48452 15 102 4.74E-12 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 SMART SM00028 48 81 42.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 SMART SM00028 278 311 280.0 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 SMART SM00028 175 208 9.2 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 SMART SM00028 14 47 0.064 T 23-04-2016 IPR019734 Tetratricopeptide repeat GO:0005515 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 Gene3D G3DSA:1.25.40.10 150 307 6.9E-9 T 23-04-2016 IPR011990 Tetratricopeptide-like helical domain GO:0005515 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 PANTHER PTHR23083 6 88 6.6E-13 T 23-04-2016 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 PANTHER PTHR23083 436 473 6.6E-13 T 23-04-2016 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 PANTHER PTHR23083 148 313 6.6E-13 T 23-04-2016 SHYC_RS09660 648238ecd652d46e9193bc2f24805ab7 478 Pfam PF14559 Tetratricopeptide repeat 25 70 2.2E-7 T 23-04-2016 SHYC_RS02170 b08d00e8d22b9e0213e6d6d4de42c9f0 237 Gene3D G3DSA:3.40.50.1000 4 226 4.2E-34 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS02170 b08d00e8d22b9e0213e6d6d4de42c9f0 237 PANTHER PTHR12725 6 236 1.3E-39 T 23-04-2016 SHYC_RS02170 b08d00e8d22b9e0213e6d6d4de42c9f0 237 PANTHER PTHR12725:SF78 6 236 1.3E-39 T 23-04-2016 SHYC_RS02170 b08d00e8d22b9e0213e6d6d4de42c9f0 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 200 2.5E-24 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS02170 b08d00e8d22b9e0213e6d6d4de42c9f0 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 195 2.0E-11 T 23-04-2016 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 SHYC_RS02170 b08d00e8d22b9e0213e6d6d4de42c9f0 237 SUPERFAMILY SSF56784 3 232 1.27E-42 T 23-04-2016 IPR023214 HAD-like domain SHYC_RS10055 f2b100bd738f65f9007acd7470f237a5 188 SUPERFAMILY SSF102405 2 179 2.29E-59 T 23-04-2016 SHYC_RS10055 f2b100bd738f65f9007acd7470f237a5 188 PANTHER PTHR31223 1 186 1.4E-87 T 23-04-2016 SHYC_RS10055 f2b100bd738f65f9007acd7470f237a5 188 PANTHER PTHR31223:SF0 1 186 1.4E-87 T 23-04-2016 SHYC_RS10055 f2b100bd738f65f9007acd7470f237a5 188 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 177 5.5E-58 T 23-04-2016 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG SHYC_RS10055 f2b100bd738f65f9007acd7470f237a5 188 Gene3D G3DSA:3.40.50.450 2 177 1.1E-66 T 23-04-2016 SHYC_RS10055 f2b100bd738f65f9007acd7470f237a5 188 Pfam PF03641 Possible lysine decarboxylase 46 175 1.9E-45 T 23-04-2016 IPR031100 LOG family SHYC_RS07980 a3d615c2f05172f551d123238c7e44df 207 Pfam PF01569 PAP2 superfamily 71 180 2.2E-15 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SHYC_RS07980 a3d615c2f05172f551d123238c7e44df 207 Gene3D G3DSA:1.20.144.10 8 196 2.8E-24 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SHYC_RS07980 a3d615c2f05172f551d123238c7e44df 207 SUPERFAMILY SSF48317 5 191 1.96E-27 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SHYC_RS07980 a3d615c2f05172f551d123238c7e44df 207 SMART SM00014 70 182 2.0E-11 T 23-04-2016 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase SHYC_RS07980 a3d615c2f05172f551d123238c7e44df 207 PANTHER PTHR14969 34 188 9.8E-19 T 23-04-2016 SHYC_RS05770 6977959e4451b7a21d157226ededb7fe 210 PIRSF PIRSF021278 2 210 7.0E-98 T 23-04-2016 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 UniPathway: UPA00040 SHYC_RS05770 6977959e4451b7a21d157226ededb7fe 210 Gene3D G3DSA:3.40.630.30 1 210 4.5E-75 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS05770 6977959e4451b7a21d157226ededb7fe 210 SUPERFAMILY SSF55729 34 118 1.48E-5 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 80 102 8.6E-7 T 23-04-2016 SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 8.6E-7 T 23-04-2016 SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 8.6E-7 T 23-04-2016 SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 236 254 8.6E-7 T 23-04-2016 SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 PRINTS PR01036 Tetracycline resistance protein TetB signature 270 295 8.6E-7 T 23-04-2016 SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 PANTHER PTHR23501 17 464 7.5E-177 T 23-04-2016 SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 PANTHER PTHR23501:SF82 17 464 7.5E-177 T 23-04-2016 SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 Pfam PF07690 Major Facilitator Superfamily 21 412 1.9E-46 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 Gene3D G3DSA:1.20.1250.20 16 192 4.9E-28 T 23-04-2016 SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 Gene3D G3DSA:1.20.1250.20 268 463 7.5E-21 T 23-04-2016 SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 SUPERFAMILY SSF103473 13 200 5.49E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 SUPERFAMILY SSF103473 251 461 5.49E-60 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS00430 598d5a73552aeaee2afc52189c6654c1 464 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 427 1.1E-101 T 23-04-2016 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 SHYC_RS06135 24f1777be2895d9dbf024f1c6571b928 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 1.9E-40 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SHYC_RS06135 24f1777be2895d9dbf024f1c6571b928 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 26.509 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS06135 24f1777be2895d9dbf024f1c6571b928 102 SUPERFAMILY SSF141091 1 101 2.49E-38 T 23-04-2016 IPR028909 Ribosomal protein L21-like GO:0005840 SHYC_RS06135 24f1777be2895d9dbf024f1c6571b928 102 PANTHER PTHR21349 1 100 1.0E-41 T 23-04-2016 SHYC_RS06135 24f1777be2895d9dbf024f1c6571b928 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 5.8E-39 T 23-04-2016 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS00185 537a8f40c88997e7b9f85824a2454f86 258 Pfam PF09648 YycH protein 32 250 2.1E-42 T 23-04-2016 IPR018604 Regulatory protein YycH-like GO:0016021 SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 PANTHER PTHR30363 1 231 6.2E-114 T 23-04-2016 SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 SUPERFAMILY SSF100950 75 233 7.67E-32 T 23-04-2016 SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 SUPERFAMILY SSF46785 5 63 1.14E-13 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.2E-20 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 Pfam PF00455 DeoR C terminal sensor domain 76 233 2.5E-47 T 23-04-2016 IPR014036 DeoR C-terminal sensor domain SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 Gene3D G3DSA:3.40.50.1360 78 215 2.2E-12 T 23-04-2016 SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 Gene3D G3DSA:1.10.10.10 9 77 1.2E-8 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.0E-11 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.0E-11 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 23-04-2016 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 PANTHER PTHR30363:SF10 1 231 6.2E-114 T 23-04-2016 SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 SMART SM01134 74 235 1.3E-57 T 23-04-2016 SHYC_RS03260 4f0493e990b7db616b78a64d8c16dfc7 250 SMART SM00420 6 58 4.0E-20 T 23-04-2016 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 SHYC_RS10125 addb21811192a6987fe16039d18b0a02 192 Pfam PF02581 Thiamine monophosphate synthase/TENI 55 171 6.7E-10 T 23-04-2016 IPR003733 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS10125 addb21811192a6987fe16039d18b0a02 192 SUPERFAMILY SSF51391 36 175 3.01E-13 T 23-04-2016 IPR022998 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357|UniPathway: UPA00060 SHYC_RS10125 addb21811192a6987fe16039d18b0a02 192 Gene3D G3DSA:3.20.20.70 3 176 7.2E-20 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS10040 48ad7c703921679ac8ef1cbbed420779 118 Pfam PF07681 DoxX 5 82 1.1E-14 T 23-04-2016 IPR032808 DoxX family SHYC_RS10040 48ad7c703921679ac8ef1cbbed420779 118 PANTHER PTHR33452 1 118 2.6E-51 T 23-04-2016 SHYC_RS10040 48ad7c703921679ac8ef1cbbed420779 118 PANTHER PTHR33452:SF2 1 118 2.6E-51 T 23-04-2016 SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 SUPERFAMILY SSF56037 341 409 1.99E-11 T 23-04-2016 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 PANTHER PTHR11807:SF2 6 412 2.2E-65 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 350 394 2.1E-14 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 1 304 20.481 T 23-04-2016 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 Pfam PF11734 TilS substrate C-terminal domain 350 404 2.4E-6 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 SUPERFAMILY SSF52402 5 199 3.56E-51 T 23-04-2016 SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 Pfam PF01171 PP-loop family 10 192 2.2E-56 T 23-04-2016 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 SMART SM00977 350 416 6.0E-12 T 23-04-2016 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 Gene3D G3DSA:3.40.50.620 9 174 6.1E-18 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 10 196 9.6E-54 T 23-04-2016 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 SHYC_RS10925 576e984c406285d4710787f65ba6bd38 426 PANTHER PTHR11807 6 412 2.2E-65 T 23-04-2016 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 PANTHER PTHR30330 1 324 4.1E-285 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 PANTHER PTHR30330 363 514 4.1E-285 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 TIGRFAM TIGR00835 agcS: amino acid carrier protein 14 480 8.8E-141 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 PRINTS PR00175 Sodium/alanine symporter signature 87 109 6.2E-58 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 PRINTS PR00175 Sodium/alanine symporter signature 180 198 6.2E-58 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 PRINTS PR00175 Sodium/alanine symporter signature 449 469 6.2E-58 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 PRINTS PR00175 Sodium/alanine symporter signature 208 227 6.2E-58 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 PRINTS PR00175 Sodium/alanine symporter signature 383 405 6.2E-58 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 PRINTS PR00175 Sodium/alanine symporter signature 299 317 6.2E-58 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 PANTHER PTHR30330:SF7 1 324 4.1E-285 T 23-04-2016 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 PANTHER PTHR30330:SF7 363 514 4.1E-285 T 23-04-2016 SHYC_RS09040 df0f7089d3bf60a3922575ca6ab61605 531 Pfam PF01235 Sodium:alanine symporter family 50 486 8.0E-152 T 23-04-2016 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 SHYC_RS02990 1d31181b972f8171f56e665d208d757f 611 SUPERFAMILY SSF56219 301 603 4.32E-31 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SHYC_RS02990 1d31181b972f8171f56e665d208d757f 611 PANTHER PTHR33607:SF1 32 607 6.8E-125 T 23-04-2016 SHYC_RS02990 1d31181b972f8171f56e665d208d757f 611 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 306 599 2.6E-10 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SHYC_RS02990 1d31181b972f8171f56e665d208d757f 611 Gene3D G3DSA:3.60.10.10 303 605 1.8E-38 T 23-04-2016 IPR005135 Endonuclease/exonuclease/phosphatase SHYC_RS02990 1d31181b972f8171f56e665d208d757f 611 PANTHER PTHR33607 32 607 6.8E-125 T 23-04-2016 SHYC_RS10665 efa34f50ae01e89e941f47fbc864edf3 202 Pfam PF05175 Methyltransferase small domain 27 198 1.8E-50 T 23-04-2016 IPR007848 Methyltransferase small domain GO:0008168 SHYC_RS10665 efa34f50ae01e89e941f47fbc864edf3 202 PANTHER PTHR18895 15 200 2.4E-86 T 23-04-2016 SHYC_RS10665 efa34f50ae01e89e941f47fbc864edf3 202 PANTHER PTHR18895:SF72 15 200 2.4E-86 T 23-04-2016 SHYC_RS10665 efa34f50ae01e89e941f47fbc864edf3 202 SUPERFAMILY SSF53335 15 198 1.12E-38 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS10665 efa34f50ae01e89e941f47fbc864edf3 202 Gene3D G3DSA:3.40.50.150 15 198 5.5E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS09500 a952b32b3327e6b5c72fe0bcd811b023 181 Gene3D G3DSA:3.40.109.10 1 174 1.4E-32 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 SHYC_RS09500 a952b32b3327e6b5c72fe0bcd811b023 181 PANTHER PTHR23026:SF115 1 174 4.7E-37 T 23-04-2016 SHYC_RS09500 a952b32b3327e6b5c72fe0bcd811b023 181 SUPERFAMILY SSF55469 1 175 9.42E-28 T 23-04-2016 IPR000415 Nitroreductase-like GO:0016491 SHYC_RS09500 a952b32b3327e6b5c72fe0bcd811b023 181 Pfam PF00881 Nitroreductase family 7 157 7.7E-20 T 23-04-2016 IPR029479 Nitroreductase SHYC_RS09500 a952b32b3327e6b5c72fe0bcd811b023 181 PANTHER PTHR23026 1 174 4.7E-37 T 23-04-2016 SHYC_RS04265 8019bfc76a68aca1e5a01acc4c0db781 167 Gene3D G3DSA:1.20.1260.10 1 163 2.7E-57 T 23-04-2016 IPR012347 Ferritin-related SHYC_RS04265 8019bfc76a68aca1e5a01acc4c0db781 167 Pfam PF00210 Ferritin-like domain 8 144 1.2E-41 T 23-04-2016 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 SHYC_RS04265 8019bfc76a68aca1e5a01acc4c0db781 167 SUPERFAMILY SSF47240 1 160 2.86E-55 T 23-04-2016 IPR009078 Ferritin-like superfamily SHYC_RS04265 8019bfc76a68aca1e5a01acc4c0db781 167 PANTHER PTHR11431 8 164 2.7E-48 T 23-04-2016 IPR001519 Ferritin GO:0006826|GO:0006879|GO:0008199 SHYC_RS09670 49dbc5ef5871f9a0c6cd5229cd94ecfc 284 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 134 146 - T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SHYC_RS09670 49dbc5ef5871f9a0c6cd5229cd94ecfc 284 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 5 258 17.247 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SHYC_RS09670 49dbc5ef5871f9a0c6cd5229cd94ecfc 284 PANTHER PTHR30589 1 277 7.8E-106 T 23-04-2016 SHYC_RS09670 49dbc5ef5871f9a0c6cd5229cd94ecfc 284 PANTHER PTHR30589:SF0 1 277 7.8E-106 T 23-04-2016 SHYC_RS09670 49dbc5ef5871f9a0c6cd5229cd94ecfc 284 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 8 253 4.2E-75 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SHYC_RS09670 49dbc5ef5871f9a0c6cd5229cd94ecfc 284 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 6 257 7.2E-75 T 23-04-2016 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 UniPathway: UPA00664 SHYC_RS09610 ce109e1f49c53178d5a13638efb9d871 268 Gene3D G3DSA:3.10.180.10 166 220 1.3E-9 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS09610 ce109e1f49c53178d5a13638efb9d871 268 SUPERFAMILY SSF54593 165 232 1.75E-11 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS09610 ce109e1f49c53178d5a13638efb9d871 268 SUPERFAMILY SSF54593 4 165 7.98E-31 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS09610 ce109e1f49c53178d5a13638efb9d871 268 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 123 3.1E-9 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SHYC_RS09610 ce109e1f49c53178d5a13638efb9d871 268 Gene3D G3DSA:3.10.180.10 6 165 1.3E-26 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS09610 ce109e1f49c53178d5a13638efb9d871 268 PANTHER PTHR10374:SF14 1 173 1.6E-44 T 23-04-2016 SHYC_RS09610 ce109e1f49c53178d5a13638efb9d871 268 PANTHER PTHR10374 1 173 1.6E-44 T 23-04-2016 SHYC_RS05380 57652c4df4ff67a35bf263c113782528 347 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SHYC_RS05380 57652c4df4ff67a35bf263c113782528 347 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 342 45.826 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SHYC_RS05380 57652c4df4ff67a35bf263c113782528 347 PANTHER PTHR21091:SF2 3 341 2.5E-121 T 23-04-2016 SHYC_RS05380 57652c4df4ff67a35bf263c113782528 347 Gene3D G3DSA:3.20.20.210 6 341 3.5E-125 T 23-04-2016 SHYC_RS05380 57652c4df4ff67a35bf263c113782528 347 SUPERFAMILY SSF51726 4 343 1.5E-98 T 23-04-2016 SHYC_RS05380 57652c4df4ff67a35bf263c113782528 347 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 341 6.8E-120 T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SHYC_RS05380 57652c4df4ff67a35bf263c113782528 347 PANTHER PTHR21091 3 341 2.5E-121 T 23-04-2016 SHYC_RS05380 57652c4df4ff67a35bf263c113782528 347 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 23-04-2016 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SHYC_RS05380 57652c4df4ff67a35bf263c113782528 347 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 339 2.9E-123 T 23-04-2016 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|UniPathway: UPA00251 SHYC_RS00345 aab4e864e06be517e4436cd8bd4d71ea 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 297 3.1E-62 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS00345 aab4e864e06be517e4436cd8bd4d71ea 328 Gene3D G3DSA:3.40.50.1100 6 43 2.9E-61 T 23-04-2016 SHYC_RS00345 aab4e864e06be517e4436cd8bd4d71ea 328 Gene3D G3DSA:3.40.50.1100 155 313 2.9E-61 T 23-04-2016 SHYC_RS00345 aab4e864e06be517e4436cd8bd4d71ea 328 Gene3D G3DSA:3.40.50.1100 44 149 2.0E-26 T 23-04-2016 SHYC_RS00345 aab4e864e06be517e4436cd8bd4d71ea 328 TIGRFAM TIGR03945 PLP_SbnA_fam: 2,3-diaminopropionate biosynthesis protein SbnA 10 312 9.7E-134 T 23-04-2016 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA SHYC_RS00345 aab4e864e06be517e4436cd8bd4d71ea 328 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 23-04-2016 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 SHYC_RS00345 aab4e864e06be517e4436cd8bd4d71ea 328 PANTHER PTHR10314 9 314 6.7E-165 T 23-04-2016 SHYC_RS00345 aab4e864e06be517e4436cd8bd4d71ea 328 PANTHER PTHR10314:SF109 9 314 6.7E-165 T 23-04-2016 SHYC_RS00345 aab4e864e06be517e4436cd8bd4d71ea 328 SUPERFAMILY SSF53686 7 314 2.23E-80 T 23-04-2016 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme SHYC_RS09300 6e5e6ac8fdb6c27948386e5add81eac4 97 PIRSF PIRSF028784 1 93 7.6E-30 T 23-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 SHYC_RS09300 6e5e6ac8fdb6c27948386e5add81eac4 97 PANTHER PTHR34702:SF1 1 97 3.7E-25 T 23-04-2016 SHYC_RS09300 6e5e6ac8fdb6c27948386e5add81eac4 97 PANTHER PTHR34702 1 97 3.7E-25 T 23-04-2016 SHYC_RS09300 6e5e6ac8fdb6c27948386e5add81eac4 97 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 32 83 3.7E-15 T 23-04-2016 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 SHYC_RS07420 96d1de2a37f355cb97b98b47b49edd90 151 SUPERFAMILY SSF54637 6 130 1.12E-36 T 23-04-2016 IPR029069 HotDog domain SHYC_RS07420 96d1de2a37f355cb97b98b47b49edd90 151 PANTHER PTHR31793:SF9 6 145 1.6E-44 T 23-04-2016 SHYC_RS07420 96d1de2a37f355cb97b98b47b49edd90 151 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 121 5.2E-26 T 23-04-2016 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 SHYC_RS07420 96d1de2a37f355cb97b98b47b49edd90 151 Pfam PF03061 Thioesterase superfamily 18 101 1.2E-18 T 23-04-2016 IPR006683 Thioesterase domain SHYC_RS07420 96d1de2a37f355cb97b98b47b49edd90 151 Gene3D G3DSA:3.10.129.10 6 130 2.5E-40 T 23-04-2016 IPR029069 HotDog domain SHYC_RS07420 96d1de2a37f355cb97b98b47b49edd90 151 PANTHER PTHR31793 6 145 1.6E-44 T 23-04-2016 SHYC_RS09765 3c15d44b6018239b9803019c64b02473 253 PANTHER PTHR31082 1 253 2.1E-72 T 23-04-2016 SHYC_RS09765 3c15d44b6018239b9803019c64b02473 253 Pfam PF06738 Putative threonine/serine exporter 15 252 8.2E-67 T 23-04-2016 IPR010619 Putative threonine/serine exporter SHYC_RS11595 bef3937de4ffedde7dc82860e375d1c0 168 PIRSF PIRSF002070 1 158 1.9E-39 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SHYC_RS11595 bef3937de4ffedde7dc82860e375d1c0 168 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 35.31 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SHYC_RS11595 bef3937de4ffedde7dc82860e375d1c0 168 PANTHER PTHR10302 1 168 5.9E-49 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SHYC_RS11595 bef3937de4ffedde7dc82860e375d1c0 168 Pfam PF00436 Single-strand binding protein family 2 103 1.8E-35 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SHYC_RS11595 bef3937de4ffedde7dc82860e375d1c0 168 SUPERFAMILY SSF50249 1 168 1.23E-55 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS11595 bef3937de4ffedde7dc82860e375d1c0 168 Gene3D G3DSA:2.40.50.140 1 168 2.0E-45 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS11595 bef3937de4ffedde7dc82860e375d1c0 168 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 168 2.2E-47 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SHYC_RS07380 0895ad60ca747344fc83837affd6d028 408 PRINTS PR01988 Putative bacilysin exporter bacE signature 350 373 2.9E-8 T 23-04-2016 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 SHYC_RS07380 0895ad60ca747344fc83837affd6d028 408 PRINTS PR01988 Putative bacilysin exporter bacE signature 245 262 2.9E-8 T 23-04-2016 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 SHYC_RS07380 0895ad60ca747344fc83837affd6d028 408 PRINTS PR01988 Putative bacilysin exporter bacE signature 45 63 2.9E-8 T 23-04-2016 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 SHYC_RS07380 0895ad60ca747344fc83837affd6d028 408 PRINTS PR01988 Putative bacilysin exporter bacE signature 284 307 2.9E-8 T 23-04-2016 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 SHYC_RS07380 0895ad60ca747344fc83837affd6d028 408 PANTHER PTHR21716:SF10 30 394 9.0E-92 T 23-04-2016 SHYC_RS07380 0895ad60ca747344fc83837affd6d028 408 PANTHER PTHR21716 30 394 9.0E-92 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like SHYC_RS07380 0895ad60ca747344fc83837affd6d028 408 Pfam PF01594 Domain of unknown function DUF20 44 370 9.6E-78 T 23-04-2016 IPR002549 Transmembrane protein TqsA-like SHYC_RS09600 0479ee81a36e1ba9af1b7022140af594 162 PANTHER PTHR23091 1 161 1.4E-68 T 23-04-2016 SHYC_RS09600 0479ee81a36e1ba9af1b7022140af594 162 Pfam PF13420 Acetyltransferase (GNAT) domain 2 153 4.3E-24 T 23-04-2016 SHYC_RS09600 0479ee81a36e1ba9af1b7022140af594 162 PANTHER PTHR23091:SF187 1 161 1.4E-68 T 23-04-2016 SHYC_RS09600 0479ee81a36e1ba9af1b7022140af594 162 SUPERFAMILY SSF55729 1 161 1.99E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS09600 0479ee81a36e1ba9af1b7022140af594 162 Gene3D G3DSA:3.40.630.30 1 161 3.0E-39 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS05275 02eef211f5b795979514f1e9a02b6c26 516 PANTHER PTHR30461:SF3 1 514 1.8E-46 T 23-04-2016 SHYC_RS05275 02eef211f5b795979514f1e9a02b6c26 516 Gene3D G3DSA:3.40.50.1390 22 150 5.7E-17 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHYC_RS05275 02eef211f5b795979514f1e9a02b6c26 516 Pfam PF00239 Resolvase, N terminal domain 22 169 8.9E-20 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHYC_RS05275 02eef211f5b795979514f1e9a02b6c26 516 SMART SM00857 22 170 1.9E-26 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHYC_RS05275 02eef211f5b795979514f1e9a02b6c26 516 PANTHER PTHR30461 1 514 1.8E-46 T 23-04-2016 SHYC_RS05275 02eef211f5b795979514f1e9a02b6c26 516 SUPERFAMILY SSF53041 22 170 2.88E-21 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHYC_RS05275 02eef211f5b795979514f1e9a02b6c26 516 Pfam PF07508 Recombinase 193 301 1.4E-14 T 23-04-2016 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 SHYC_RS04745 919943391ff7d7fd200497625174a7a6 2848 Pfam PF01551 Peptidase family M23 2003 2098 1.4E-16 T 23-04-2016 IPR016047 Peptidase M23 SHYC_RS04745 919943391ff7d7fd200497625174a7a6 2848 PANTHER PTHR21666 1983 2094 6.3E-12 T 23-04-2016 SHYC_RS04745 919943391ff7d7fd200497625174a7a6 2848 Pfam PF10145 Phage-related minor tail protein 537 731 4.5E-35 T 23-04-2016 IPR010090 Phage tail tape measure protein SHYC_RS04745 919943391ff7d7fd200497625174a7a6 2848 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 2348 2839 1.0E-8 T 23-04-2016 SHYC_RS04745 919943391ff7d7fd200497625174a7a6 2848 Gene3D G3DSA:2.70.70.10 1977 2099 2.7E-21 T 23-04-2016 SHYC_RS04745 919943391ff7d7fd200497625174a7a6 2848 SUPERFAMILY SSF51261 1937 2097 1.41E-21 T 23-04-2016 IPR011055 Duplicated hybrid motif SHYC_RS04745 919943391ff7d7fd200497625174a7a6 2848 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 498 840 4.7E-45 T 23-04-2016 IPR010090 Phage tail tape measure protein SHYC_RS04210 25293c15a17e1a7068a8db5a6665fb40 398 PANTHER PTHR41246 2 397 5.8E-117 T 23-04-2016 SHYC_RS04210 25293c15a17e1a7068a8db5a6665fb40 398 Pfam PF07537 CamS sex pheromone cAM373 precursor 59 388 5.8E-108 T 23-04-2016 IPR011426 CamS sex pheromone cAM373 SHYC_RS04210 25293c15a17e1a7068a8db5a6665fb40 398 Gene3D G3DSA:3.10.570.10 55 397 4.1E-122 T 23-04-2016 SHYC_RS04210 25293c15a17e1a7068a8db5a6665fb40 398 PIRSF PIRSF012509 1 397 9.8E-132 T 23-04-2016 IPR011426 CamS sex pheromone cAM373 SHYC_RS09725 55f5539c6fb81432ea1dc72ed127a8bd 164 Gene3D G3DSA:3.40.50.2020 22 162 8.9E-15 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS09725 55f5539c6fb81432ea1dc72ed127a8bd 164 PANTHER PTHR11907:SF9 23 164 2.3E-21 T 23-04-2016 SHYC_RS09725 55f5539c6fb81432ea1dc72ed127a8bd 164 PANTHER PTHR11907 23 164 2.3E-21 T 23-04-2016 SHYC_RS09725 55f5539c6fb81432ea1dc72ed127a8bd 164 SUPERFAMILY SSF53271 21 163 4.26E-16 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS03490 2cc670dbae93376960334dc8f528929c 475 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 12 459 3.6E-135 T 23-04-2016 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 SHYC_RS03490 2cc670dbae93376960334dc8f528929c 475 PANTHER PTHR33451 1 466 3.9E-170 T 23-04-2016 SHYC_RS03490 2cc670dbae93376960334dc8f528929c 475 Pfam PF03553 Na+/H+ antiporter family 162 455 3.0E-63 T 23-04-2016 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 SHYC_RS03490 2cc670dbae93376960334dc8f528929c 475 PANTHER PTHR33451:SF3 1 466 3.9E-170 T 23-04-2016 SHYC_RS06470 0bbc6207a87da1ef8965804330532423 237 PANTHER PTHR33507:SF1 19 236 2.9E-42 T 23-04-2016 SHYC_RS06470 0bbc6207a87da1ef8965804330532423 237 PANTHER PTHR33507 19 236 2.9E-42 T 23-04-2016 SHYC_RS06470 0bbc6207a87da1ef8965804330532423 237 Gene3D G3DSA:2.40.50.140 180 234 8.2E-5 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS00405 73f911dbd032c909752d9ca45436429e 462 Gene3D G3DSA:1.20.1250.20 11 192 1.5E-28 T 23-04-2016 SHYC_RS00405 73f911dbd032c909752d9ca45436429e 462 Gene3D G3DSA:1.20.1250.20 265 458 1.7E-15 T 23-04-2016 SHYC_RS00405 73f911dbd032c909752d9ca45436429e 462 SUPERFAMILY SSF103473 6 201 6.8E-55 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS00405 73f911dbd032c909752d9ca45436429e 462 SUPERFAMILY SSF103473 249 459 6.8E-55 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS00405 73f911dbd032c909752d9ca45436429e 462 PANTHER PTHR23501 2 462 2.8E-280 T 23-04-2016 SHYC_RS00405 73f911dbd032c909752d9ca45436429e 462 PANTHER PTHR23501:SF85 2 462 2.8E-280 T 23-04-2016 SHYC_RS00405 73f911dbd032c909752d9ca45436429e 462 Pfam PF07690 Major Facilitator Superfamily 19 410 2.9E-47 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS02155 bc1775b4ff2d225c37f93b2fb5ad2c64 208 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 4 202 9.7E-43 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SHYC_RS02155 bc1775b4ff2d225c37f93b2fb5ad2c64 208 SUPERFAMILY SSF51366 1 206 1.49E-50 T 23-04-2016 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 SHYC_RS02155 bc1775b4ff2d225c37f93b2fb5ad2c64 208 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 207 31.144 T 23-04-2016 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24|UniPathway: UPA00035 SHYC_RS02155 bc1775b4ff2d225c37f93b2fb5ad2c64 208 PANTHER PTHR22854:SF6 1 208 1.9E-48 T 23-04-2016 SHYC_RS02155 bc1775b4ff2d225c37f93b2fb5ad2c64 208 PANTHER PTHR22854 1 208 1.9E-48 T 23-04-2016 SHYC_RS02155 bc1775b4ff2d225c37f93b2fb5ad2c64 208 Gene3D G3DSA:3.20.20.70 1 205 7.8E-57 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS09700 994d831ee6d5ee57368f68cf76d637ab 213 Gene3D G3DSA:1.10.3210.10 2 189 1.5E-30 T 23-04-2016 IPR006674 HD domain SHYC_RS09700 994d831ee6d5ee57368f68cf76d637ab 213 SUPERFAMILY SSF109604 3 188 4.4E-34 T 23-04-2016 SHYC_RS09700 994d831ee6d5ee57368f68cf76d637ab 213 Pfam PF12917 HD containing hydrolase-like enzyme 1 209 1.2E-93 T 23-04-2016 IPR027366 HD containing hydrolase-like enzyme SHYC_RS04940 b7fa9e1caa9837c18add17a780fa9c68 322 SUPERFAMILY SSF52540 18 223 1.63E-5 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04940 b7fa9e1caa9837c18add17a780fa9c68 322 Pfam PF13479 AAA domain 19 213 5.7E-39 T 23-04-2016 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 3 210 1.4E-86 T 23-04-2016 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 723 833 5.3E-19 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 SUPERFAMILY SSF47384 602 678 5.49E-16 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 SMART SM00388 614 678 3.9E-18 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 Gene3D G3DSA:3.40.50.300 3 209 1.0E-88 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 SMART SM00387 722 834 2.0E-31 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 PANTHER PTHR24423 3 178 6.9E-112 T 23-04-2016 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 PANTHER PTHR24423 563 832 6.9E-112 T 23-04-2016 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 794 812 2.4E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 759 773 2.4E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 818 831 2.4E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 PRINTS PR00344 Bacterial sensor protein C-terminal signature 777 787 2.4E-8 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 SUPERFAMILY SSF55874 667 832 6.94E-37 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 PANTHER PTHR24423:SF562 3 178 6.9E-112 T 23-04-2016 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 PANTHER PTHR24423:SF562 563 832 6.9E-112 T 23-04-2016 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 Gene3D G3DSA:1.20.120.620 362 467 2.8E-28 T 23-04-2016 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 Pfam PF13493 Domain of unknown function (DUF4118) 367 473 2.6E-26 T 23-04-2016 IPR025201 Sensor protein KdpD, transmembrane domain SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 Pfam PF00512 His Kinase A (phospho-acceptor) domain 615 677 3.3E-14 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 Gene3D G3DSA:3.30.565.10 664 833 3.9E-36 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS00335 295dfc27882dfe78ac8cb00f61acb500 837 Gene3D G3DSA:1.10.287.130 606 663 1.6E-17 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 SUPERFAMILY SSF52172 1 126 1.01E-32 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 Pfam PF00072 Response regulator receiver domain 4 115 2.2E-26 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 SMART SM00421 137 194 7.2E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 PANTHER PTHR26402 2 200 4.3E-87 T 23-04-2016 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.4E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.4E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.4E-8 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 SUPERFAMILY SSF46894 127 200 1.6E-15 T 23-04-2016 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 SMART SM00448 2 115 1.2E-27 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 Gene3D G3DSA:1.10.10.10 141 200 2.9E-17 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 PANTHER PTHR26402:SF580 2 200 4.3E-87 T 23-04-2016 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 Gene3D G3DSA:3.40.50.2300 1 140 3.9E-34 T 23-04-2016 SHYC_RS07570 2b2a77cf70e41198e5a9aff57f6fcdee 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 191 1.4E-12 T 23-04-2016 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 SHYC_RS00665 af1effec39611c255f3eab9e9588c9e9 64 Pfam PF11188 Protein of unknown function (DUF2975) 10 64 1.3E-6 T 23-04-2016 IPR021354 Protein of unknown function DUF2975 SHYC_RS07685 8ae89983004f7536267c319c1781623c 169 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 6 154 2.8E-50 T 23-04-2016 IPR012652 Energy coupling factor transporter S component ThiW SHYC_RS07685 8ae89983004f7536267c319c1781623c 169 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 4 156 1.6E-56 T 23-04-2016 IPR012652 Energy coupling factor transporter S component ThiW SHYC_RS07685 8ae89983004f7536267c319c1781623c 169 PIRSF PIRSF024534 1 164 1.6E-58 T 23-04-2016 IPR012652 Energy coupling factor transporter S component ThiW SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 SUPERFAMILY SSF52440 3 112 4.03E-44 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 114 320 3.5E-66 T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 Pfam PF02785 Biotin carboxylase C-terminal domain 334 443 7.2E-35 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 SUPERFAMILY SSF51246 329 445 2.3E-36 T 23-04-2016 IPR011054 Rudiment single hybrid motif SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 Pfam PF00289 Biotin carboxylase, N-terminal domain 3 109 1.7E-42 T 23-04-2016 IPR005481 Biotin carboxylase-like, N-terminal domain SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 SUPERFAMILY SSF56059 82 350 5.13E-66 T 23-04-2016 SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 Gene3D G3DSA:3.30.1490.20 129 201 1.6E-26 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 284 291 - T 23-04-2016 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 PANTHER PTHR18866 3 446 3.7E-244 T 23-04-2016 SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 Gene3D G3DSA:3.40.50.20 3 128 2.4E-48 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 SMART SM00878 334 443 5.2E-48 T 23-04-2016 IPR005482 Biotin carboxylase, C-terminal SHYC_RS06335 13795c16dc1ec2b97220f4bf34bfaf4a 454 Gene3D G3DSA:3.30.470.20 205 445 8.1E-88 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 Pfam PF00106 short chain dehydrogenase 12 216 5.1E-46 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.6E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 1.6E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 196 213 1.6E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 194 1.6E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 236 256 1.6E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 165 1.6E-29 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 175 194 2.6E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.6E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 2.6E-8 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PANTHER PTHR24322:SF625 16 102 4.9E-43 T 23-04-2016 SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PANTHER PTHR24322:SF625 175 207 4.9E-43 T 23-04-2016 SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PANTHER PTHR24322:SF625 119 159 4.9E-43 T 23-04-2016 SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PANTHER PTHR24322 16 102 4.9E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PANTHER PTHR24322 175 207 4.9E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 PANTHER PTHR24322 119 159 4.9E-43 T 23-04-2016 IPR002347 Short-chain dehydrogenase/reductase SDR SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 Gene3D G3DSA:3.40.50.720 7 274 1.2E-65 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 162 190 - T 23-04-2016 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 SHYC_RS01005 bfdef5c3fa4484d3c3d9ee0262249a81 279 SUPERFAMILY SSF51735 10 275 7.41E-63 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS10410 86e65da6366549a0729ede46942032df 160 PANTHER PTHR23091 1 158 2.9E-29 T 23-04-2016 SHYC_RS10410 86e65da6366549a0729ede46942032df 160 SUPERFAMILY SSF55729 1 158 1.1E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10410 86e65da6366549a0729ede46942032df 160 Pfam PF13673 Acetyltransferase (GNAT) domain 54 157 2.6E-15 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS10410 86e65da6366549a0729ede46942032df 160 Gene3D G3DSA:3.40.630.30 1 157 8.2E-38 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS10410 86e65da6366549a0729ede46942032df 160 PANTHER PTHR23091:SF248 1 158 2.9E-29 T 23-04-2016 SHYC_RS09360 15c4b16ef892878f460665fe9d83297f 382 Pfam PF04918 DltD central region 96 256 1.5E-34 T 23-04-2016 IPR007002 DltD, central domain UniPathway: UPA00556 SHYC_RS09360 15c4b16ef892878f460665fe9d83297f 382 PANTHER PTHR40039 1 381 3.7E-94 T 23-04-2016 SHYC_RS09360 15c4b16ef892878f460665fe9d83297f 382 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 8 379 2.2E-96 T 23-04-2016 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD UniPathway: UPA00556 SHYC_RS09360 15c4b16ef892878f460665fe9d83297f 382 Pfam PF04915 DltD N-terminal region 40 90 4.4E-14 T 23-04-2016 IPR006999 DltD, N-terminal UniPathway: UPA00556 SHYC_RS09360 15c4b16ef892878f460665fe9d83297f 382 Pfam PF04914 DltD C-terminal region 258 381 2.0E-34 T 23-04-2016 IPR006998 DltD, C-terminal UniPathway: UPA00556 SHYC_RS09360 15c4b16ef892878f460665fe9d83297f 382 PANTHER PTHR40039:SF1 1 381 3.7E-94 T 23-04-2016 SHYC_RS08750 649dc862011b2e5c8041486cfffe50d8 235 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 3 234 30.916 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SHYC_RS08750 649dc862011b2e5c8041486cfffe50d8 235 Gene3D G3DSA:3.30.470.20 93 219 4.3E-52 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS08750 649dc862011b2e5c8041486cfffe50d8 235 ProSitePatterns PS01058 SAICAR synthetase signature 2. 172 180 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SHYC_RS08750 649dc862011b2e5c8041486cfffe50d8 235 Pfam PF01259 SAICAR synthetase 5 227 3.4E-61 T 23-04-2016 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SHYC_RS08750 649dc862011b2e5c8041486cfffe50d8 235 PANTHER PTHR11609:SF2 4 232 3.6E-109 T 23-04-2016 SHYC_RS08750 649dc862011b2e5c8041486cfffe50d8 235 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 6 215 1.9E-70 T 23-04-2016 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SHYC_RS08750 649dc862011b2e5c8041486cfffe50d8 235 ProSitePatterns PS01057 SAICAR synthetase signature 1. 85 99 - T 23-04-2016 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|UniPathway: UPA00074 SHYC_RS08750 649dc862011b2e5c8041486cfffe50d8 235 PANTHER PTHR11609 4 232 3.6E-109 T 23-04-2016 SHYC_RS08750 649dc862011b2e5c8041486cfffe50d8 235 SUPERFAMILY SSF56104 3 232 8.83E-76 T 23-04-2016 SHYC_RS08750 649dc862011b2e5c8041486cfffe50d8 235 Gene3D G3DSA:3.30.200.20 5 92 6.8E-38 T 23-04-2016 SHYC_RS09090 3d3a4c5c06feb5e2f503cfed444a5411 123 PANTHER PTHR10681 1 94 7.0E-24 T 23-04-2016 SHYC_RS09090 3d3a4c5c06feb5e2f503cfed444a5411 123 SUPERFAMILY SSF46458 3 121 7.91E-31 T 23-04-2016 IPR009050 Globin-like SHYC_RS09090 3d3a4c5c06feb5e2f503cfed444a5411 123 Pfam PF01152 Bacterial-like globin 6 118 4.2E-24 T 23-04-2016 IPR001486 Truncated hemoglobin GO:0019825 SHYC_RS09090 3d3a4c5c06feb5e2f503cfed444a5411 123 Gene3D G3DSA:1.10.490.10 2 121 7.0E-37 T 23-04-2016 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 SHYC_RS01130 6e15bbd967c8ffc43fa13f06953e6d83 152 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 6 39 1.9E-4 T 23-04-2016 IPR003959 ATPase, AAA-type, core GO:0005524 SHYC_RS01130 6e15bbd967c8ffc43fa13f06953e6d83 152 PANTHER PTHR37816:SF1 3 152 8.3E-32 T 23-04-2016 SHYC_RS01130 6e15bbd967c8ffc43fa13f06953e6d83 152 PANTHER PTHR37816 3 152 8.3E-32 T 23-04-2016 SHYC_RS01130 6e15bbd967c8ffc43fa13f06953e6d83 152 Gene3D G3DSA:3.40.50.300 4 103 1.7E-15 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS01130 6e15bbd967c8ffc43fa13f06953e6d83 152 SUPERFAMILY SSF52540 3 99 2.49E-17 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS02565 754b95c6178e2549b7e2d9565640a798 273 PANTHER PTHR30336:SF2 19 233 1.9E-40 T 23-04-2016 SHYC_RS02565 754b95c6178e2549b7e2d9565640a798 273 PANTHER PTHR30336 19 233 1.9E-40 T 23-04-2016 SHYC_RS02565 754b95c6178e2549b7e2d9565640a798 273 Pfam PF02698 DUF218 domain 111 235 1.3E-27 T 23-04-2016 IPR003848 Domain of unknown function DUF218 SHYC_RS02565 754b95c6178e2549b7e2d9565640a798 273 Gene3D G3DSA:3.40.50.620 109 227 4.2E-23 T 23-04-2016 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold SHYC_RS08575 bffdd60a349dc5f4b75bc2622c8397e2 270 SUPERFAMILY SSF161098 4 254 2.8E-44 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS08575 bffdd60a349dc5f4b75bc2622c8397e2 270 PANTHER PTHR30222 4 268 3.7E-65 T 23-04-2016 SHYC_RS08575 bffdd60a349dc5f4b75bc2622c8397e2 270 PANTHER PTHR30222:SF1 4 268 3.7E-65 T 23-04-2016 SHYC_RS08575 bffdd60a349dc5f4b75bc2622c8397e2 270 Gene3D G3DSA:1.10.3720.10 2 260 3.2E-50 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS08575 bffdd60a349dc5f4b75bc2622c8397e2 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 261 3.1E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS11145 caa41495553e355597da0a0c25048caf 370 PANTHER PTHR41771 16 369 2.4E-68 T 23-04-2016 SHYC_RS11145 caa41495553e355597da0a0c25048caf 370 Pfam PF07907 YibE/F-like protein 128 359 2.1E-65 T 23-04-2016 IPR012507 YibE/F-like SHYC_RS11145 caa41495553e355597da0a0c25048caf 370 PANTHER PTHR41771:SF1 16 369 2.4E-68 T 23-04-2016 SHYC_RS03315 b54f01919fa7f5a6474ad82aba293a26 393 Pfam PF05977 Transmembrane secretion effector 9 379 4.9E-36 T 23-04-2016 IPR010290 Transmembrane secretion effector SHYC_RS03315 b54f01919fa7f5a6474ad82aba293a26 393 PANTHER PTHR23513 5 382 2.3E-65 T 23-04-2016 SHYC_RS03315 b54f01919fa7f5a6474ad82aba293a26 393 Gene3D G3DSA:1.20.1250.20 211 382 3.9E-12 T 23-04-2016 SHYC_RS03315 b54f01919fa7f5a6474ad82aba293a26 393 Gene3D G3DSA:1.20.1250.20 5 182 1.9E-11 T 23-04-2016 SHYC_RS03315 b54f01919fa7f5a6474ad82aba293a26 393 PANTHER PTHR23513:SF11 5 382 2.3E-65 T 23-04-2016 SHYC_RS03315 b54f01919fa7f5a6474ad82aba293a26 393 SUPERFAMILY SSF103473 4 386 1.2E-35 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS06705 b8cbe1f7408b6bb574c32f76a26c5c27 128 SUPERFAMILY SSF52821 10 121 1.17E-30 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS06705 b8cbe1f7408b6bb574c32f76a26c5c27 128 Gene3D G3DSA:3.40.250.10 28 123 1.7E-28 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS06705 b8cbe1f7408b6bb574c32f76a26c5c27 128 PANTHER PTHR12231 45 122 5.1E-13 T 23-04-2016 SHYC_RS06705 b8cbe1f7408b6bb574c32f76a26c5c27 128 Pfam PF00581 Rhodanese-like domain 35 121 5.1E-17 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS06705 b8cbe1f7408b6bb574c32f76a26c5c27 128 SMART SM00450 31 126 2.9E-23 T 23-04-2016 IPR001763 Rhodanese-like domain SHYC_RS06705 b8cbe1f7408b6bb574c32f76a26c5c27 128 PANTHER PTHR12231:SF138 45 122 5.1E-13 T 23-04-2016 SHYC_RS07250 af441463f05b62f1d671e80fb0a4eb1a 89 SUPERFAMILY SSF54975 2 87 9.59E-23 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHYC_RS07250 af441463f05b62f1d671e80fb0a4eb1a 89 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 23-04-2016 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHYC_RS07250 af441463f05b62f1d671e80fb0a4eb1a 89 Pfam PF00708 Acylphosphatase 2 87 1.7E-19 T 23-04-2016 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 SHYC_RS07250 af441463f05b62f1d671e80fb0a4eb1a 89 Gene3D G3DSA:3.30.70.100 3 87 2.3E-23 T 23-04-2016 SHYC_RS07250 af441463f05b62f1d671e80fb0a4eb1a 89 PANTHER PTHR10029 6 70 4.8E-14 T 23-04-2016 SHYC_RS06190 89013e7013a8380ded259d2eebe21f09 760 Pfam PF01368 DHH family 82 208 1.6E-13 T 23-04-2016 IPR001667 DDH domain SHYC_RS06190 89013e7013a8380ded259d2eebe21f09 760 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 563 752 5.6E-50 T 23-04-2016 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal SHYC_RS06190 89013e7013a8380ded259d2eebe21f09 760 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 28 557 3.0E-177 T 23-04-2016 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 SHYC_RS06190 89013e7013a8380ded259d2eebe21f09 760 PANTHER PTHR30255:SF2 2 750 3.7E-272 T 23-04-2016 SHYC_RS06190 89013e7013a8380ded259d2eebe21f09 760 PANTHER PTHR30255 2 750 3.7E-272 T 23-04-2016 SHYC_RS06190 89013e7013a8380ded259d2eebe21f09 760 SUPERFAMILY SSF64182 57 448 5.49E-115 T 23-04-2016 SHYC_RS06190 89013e7013a8380ded259d2eebe21f09 760 Pfam PF02272 DHHA1 domain 370 434 1.8E-8 T 23-04-2016 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7 SHYC_RS04315 4d09ea2a4cb75b6bf0c235889812e8a1 423 PANTHER PTHR30213:SF1 55 386 7.2E-100 T 23-04-2016 SHYC_RS04315 4d09ea2a4cb75b6bf0c235889812e8a1 423 PANTHER PTHR30213 55 386 7.2E-100 T 23-04-2016 SHYC_RS04315 4d09ea2a4cb75b6bf0c235889812e8a1 423 Pfam PF03631 Virulence factor BrkB 94 346 6.9E-71 T 23-04-2016 IPR017039 Virulence factor BrkB SHYC_RS04315 4d09ea2a4cb75b6bf0c235889812e8a1 423 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 83 345 5.7E-54 T 23-04-2016 IPR017039 Virulence factor BrkB SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 Gene3D G3DSA:2.40.50.110 55 117 6.5E-13 T 23-04-2016 SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 ProSitePatterns PS00278 Staphyloccocal enterotoxin/Streptococcal pyrogenic exotoxin signature 2. 158 181 - T 23-04-2016 IPR006126 Staphylococcal enterotoxin/Streptococcal pyrogenic exotoxin, conserved site GO:0005576|GO:0009405 SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 Pfam PF02876 Staphylococcal/Streptococcal toxin, beta-grasp domain 134 236 2.5E-9 T 23-04-2016 IPR006123 Staphylococcal/Streptococcal toxin, beta-grasp domain GO:0005576|GO:0009405 SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01898 Bacterial superantigen superfamily signature 171 185 3.9E-10 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01898 Bacterial superantigen superfamily signature 85 111 3.9E-10 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01898 Bacterial superantigen superfamily signature 158 171 3.9E-10 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01898 Bacterial superantigen superfamily signature 113 126 3.9E-10 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01898 Bacterial superantigen superfamily signature 212 228 3.9E-10 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 Gene3D G3DSA:3.10.20.120 118 230 5.9E-31 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 SUPERFAMILY SSF54334 140 229 1.57E-23 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01800 Staphylococcus aureus exotoxin signature 18 32 1.2E-16 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01800 Staphylococcus aureus exotoxin signature 197 212 1.2E-16 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01800 Staphylococcus aureus exotoxin signature 115 126 1.2E-16 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01800 Staphylococcus aureus exotoxin signature 157 173 1.2E-16 T 23-04-2016 IPR008375 Staphylococcus aureus exotoxin GO:0005576|GO:0009405 SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 SUPERFAMILY SSF50203 42 124 3.85E-16 T 23-04-2016 IPR008992 Enterotoxin GO:0009405 SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 Pfam PF09199 Staphylococcal superantigen-like OB-fold domain 48 124 3.0E-15 T 23-04-2016 IPR015282 Staphylococcal superantigen-like OB-fold domain SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 16 34 1.0E-11 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 217 230 1.0E-11 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 191 207 1.0E-11 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 113 133 1.0E-11 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 38 55 1.0E-11 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS00465 a22f53d250132e72ad7081cf23a75999 236 PRINTS PR01501 Staphylococcal toxic shock syndrome toxin signature 166 188 1.0E-11 T 23-04-2016 IPR013307 Superantigen, staphylococcal/streptococcal toxin, bacterial SHYC_RS04375 9a71b4c9487c264b67b6cc1f9eedac9d 103 SUPERFAMILY SSF101697 2 102 8.63E-38 T 23-04-2016 IPR014938 Protein of unknown function DUF1811 SHYC_RS04375 9a71b4c9487c264b67b6cc1f9eedac9d 103 Gene3D G3DSA:2.30.30.340 52 102 2.7E-21 T 23-04-2016 SHYC_RS04375 9a71b4c9487c264b67b6cc1f9eedac9d 103 Gene3D G3DSA:1.10.287.880 1 51 8.0E-24 T 23-04-2016 SHYC_RS04375 9a71b4c9487c264b67b6cc1f9eedac9d 103 Pfam PF08838 Protein of unknown function (DUF1811) 4 102 2.6E-39 T 23-04-2016 IPR014938 Protein of unknown function DUF1811 SHYC_RS00310 58a3bf170c3526c9992e5ae980f953df 451 Pfam PF00425 chorismate binding enzyme 195 441 2.1E-60 T 23-04-2016 IPR015890 Chorismate-utilising enzyme, C-terminal SHYC_RS00310 58a3bf170c3526c9992e5ae980f953df 451 SUPERFAMILY SSF56322 41 449 6.41E-81 T 23-04-2016 IPR005801 ADC synthase GO:0009058 SHYC_RS00310 58a3bf170c3526c9992e5ae980f953df 451 PANTHER PTHR11236:SF17 197 445 1.5E-101 T 23-04-2016 SHYC_RS00310 58a3bf170c3526c9992e5ae980f953df 451 PANTHER PTHR11236 197 445 1.5E-101 T 23-04-2016 SHYC_RS00310 58a3bf170c3526c9992e5ae980f953df 451 Gene3D G3DSA:3.60.120.10 54 449 8.0E-76 T 23-04-2016 IPR005801 ADC synthase GO:0009058 SHYC_RS00310 58a3bf170c3526c9992e5ae980f953df 451 TIGRFAM TIGR03494 salicyl_syn: salicylate synthase 46 447 1.7E-120 T 23-04-2016 IPR019996 Salicylate synthase GO:0008909|GO:0016833 KEGG: 00130+5.4.4.2|KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626|UniPathway: UPA00011 SHYC_RS01315 8324095bb8f341ca8647de5fc6d80452 229 Pfam PF04507 Protein of unknown function, DUF576 3 210 1.9E-56 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS01315 8324095bb8f341ca8647de5fc6d80452 229 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 3 210 3.7E-54 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS09145 13e71796873992fcb00462f2ad16002b 308 SUPERFAMILY SSF161098 86 285 8.5E-20 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09145 13e71796873992fcb00462f2ad16002b 308 PANTHER PTHR30465 1 303 1.5E-148 T 23-04-2016 SHYC_RS09145 13e71796873992fcb00462f2ad16002b 308 PANTHER PTHR30465:SF74 1 303 1.5E-148 T 23-04-2016 SHYC_RS09145 13e71796873992fcb00462f2ad16002b 308 Gene3D G3DSA:1.10.3720.10 88 295 2.5E-17 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09145 13e71796873992fcb00462f2ad16002b 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 302 3.1E-38 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS08475 7d7fa7d6414786b9dadca2d0797cf528 82 PANTHER PTHR41304 2 82 3.0E-19 T 23-04-2016 SHYC_RS08475 7d7fa7d6414786b9dadca2d0797cf528 82 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 6 75 1.0E-21 T 23-04-2016 IPR016979 Protein of unknown function DUF2129 SHYC_RS08475 7d7fa7d6414786b9dadca2d0797cf528 82 PANTHER PTHR41304:SF1 2 82 3.0E-19 T 23-04-2016 SHYC_RS00285 79af6e02b4e22da4d9c8b821432a6928 232 Pfam PF02361 Cobalt transport protein 3 191 2.5E-14 T 23-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SHYC_RS00285 79af6e02b4e22da4d9c8b821432a6928 232 PANTHER PTHR33514:SF5 1 230 9.4E-26 T 23-04-2016 SHYC_RS00285 79af6e02b4e22da4d9c8b821432a6928 232 PANTHER PTHR33514 1 230 9.4E-26 T 23-04-2016 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 PANTHER PTHR22807:SF30 9 436 1.3E-124 T 23-04-2016 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 Pfam PF01029 NusB family 4 123 1.1E-27 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 Gene3D G3DSA:3.40.50.150 233 432 6.7E-60 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 PANTHER PTHR22807 9 436 1.3E-124 T 23-04-2016 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 5 432 4.9E-120 T 23-04-2016 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 SUPERFAMILY SSF48013 4 150 1.07E-31 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 Gene3D G3DSA:1.10.940.10 4 151 3.3E-40 T 23-04-2016 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 Pfam PF01189 16S rRNA methyltransferase RsmB/F 242 429 9.0E-54 T 23-04-2016 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 414 431 3.9E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 316 328 3.9E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 223 237 3.9E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 252 262 3.9E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 366 382 3.9E-29 T 23-04-2016 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS08120 6e7d3d5333e50bc59a649a289b635c0e 440 SUPERFAMILY SSF53335 134 432 7.67E-69 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS10380 c3ced43f1a4d54371889c22fb47ca1a2 317 PANTHER PTHR30472 3 314 1.1E-63 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS10380 c3ced43f1a4d54371889c22fb47ca1a2 317 Pfam PF01032 FecCD transport family 29 307 3.8E-61 T 23-04-2016 IPR000522 ABC transporter, permease protein GO:0005215|GO:0016020 SHYC_RS10380 c3ced43f1a4d54371889c22fb47ca1a2 317 SUPERFAMILY SSF81345 7 306 3.4E-53 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS10380 c3ced43f1a4d54371889c22fb47ca1a2 317 Gene3D G3DSA:1.10.3470.10 26 312 1.1E-64 T 23-04-2016 IPR029022 ABC transporter, BtuC-like SHYC_RS07635 6f31c4472f8cf341155ca9f6b9631826 68 PANTHER PTHR34772 1 63 9.0E-21 T 23-04-2016 SHYC_RS07635 6f31c4472f8cf341155ca9f6b9631826 68 PANTHER PTHR34772:SF1 1 63 9.0E-21 T 23-04-2016 SHYC_RS07635 6f31c4472f8cf341155ca9f6b9631826 68 Gene3D G3DSA:2.30.30.100 3 64 9.0E-22 T 23-04-2016 SHYC_RS07635 6f31c4472f8cf341155ca9f6b9631826 68 SUPERFAMILY SSF50182 7 63 5.32E-17 T 23-04-2016 IPR010920 LSM domain SHYC_RS07635 6f31c4472f8cf341155ca9f6b9631826 68 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 63 1.3E-23 T 23-04-2016 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 SHYC_RS10295 82c8b5f37edd46b78b7071df57f37e45 147 PANTHER PTHR34703 5 136 6.2E-43 T 23-04-2016 SHYC_RS10295 82c8b5f37edd46b78b7071df57f37e45 147 PANTHER PTHR34703:SF1 5 136 6.2E-43 T 23-04-2016 SHYC_RS10295 82c8b5f37edd46b78b7071df57f37e45 147 Pfam PF03334 Na+/H+ antiporter subunit 15 96 6.9E-25 T 23-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 SHYC_RS10295 82c8b5f37edd46b78b7071df57f37e45 147 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 16 105 3.5E-26 T 23-04-2016 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:0015992 SHYC_RS07020 1fb6f691f999f74e070f6f2dcc91cade 231 Pfam PF04298 Putative neutral zinc metallopeptidase 7 227 7.1E-90 T 23-04-2016 IPR007395 Putative neutral zinc metallopeptidase SHYC_RS07020 1fb6f691f999f74e070f6f2dcc91cade 231 PANTHER PTHR36434 1 229 2.9E-110 T 23-04-2016 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 Gene3D G3DSA:3.90.780.10 325 488 1.9E-10 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 PRINTS PR01607 Apyrase family signature 237 257 8.5E-13 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 PRINTS PR01607 Apyrase family signature 357 380 8.5E-13 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 PRINTS PR01607 Apyrase family signature 184 201 8.5E-13 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 PRINTS PR01607 Apyrase family signature 211 234 8.5E-13 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 PRINTS PR01607 Apyrase family signature 7 25 8.5E-13 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 PANTHER PTHR11575:SF6 1 450 6.3E-76 T 23-04-2016 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 Pfam PF02872 5'-nucleotidase, C-terminal domain 322 451 1.3E-9 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 PANTHER PTHR11575 1 450 6.3E-76 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 SUPERFAMILY SSF55816 321 488 6.8E-16 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 SUPERFAMILY SSF56300 2 300 4.3E-56 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS08980 bca9f3c85d2a240f657bfb6e5be54675 497 Gene3D G3DSA:3.60.21.10 5 300 7.4E-56 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS05210 ab4611cc9d21014c7ed8a0c7a9287daa 201 Pfam PF04193 PQ loop repeat 4 55 2.0E-5 T 23-04-2016 IPR006603 PQ-loop repeat SHYC_RS08555 d1ece5ad26b76c05e90963b283a54ba8 203 SUPERFAMILY SSF142913 2 203 2.14E-73 T 23-04-2016 SHYC_RS08555 d1ece5ad26b76c05e90963b283a54ba8 203 Pfam PF06335 Protein of unknown function (DUF1054) 6 202 2.1E-77 T 23-04-2016 IPR009403 Protein of unknown function UPF0637 SHYC_RS08555 d1ece5ad26b76c05e90963b283a54ba8 203 Hamap MF_01851 UPF0637 protein . 5 203 36.302 T 23-04-2016 IPR009403 Protein of unknown function UPF0637 SHYC_RS08555 d1ece5ad26b76c05e90963b283a54ba8 203 PIRSF PIRSF021332 1 203 4.9E-82 T 23-04-2016 IPR009403 Protein of unknown function UPF0637 SHYC_RS06280 dea20d310faddb7a2fe49065aa2a2ff1 90 PIRSF PIRSF037258 1 87 4.7E-42 T 23-04-2016 IPR009309 Uncharacterised protein family UPF0297 SHYC_RS06280 dea20d310faddb7a2fe49065aa2a2ff1 90 PANTHER PTHR40067 2 88 9.0E-43 T 23-04-2016 SHYC_RS06280 dea20d310faddb7a2fe49065aa2a2ff1 90 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 82 7.1E-35 T 23-04-2016 IPR009309 Uncharacterised protein family UPF0297 SHYC_RS06280 dea20d310faddb7a2fe49065aa2a2ff1 90 Hamap MF_01507 UPF0297 protein . 1 84 25.875 T 23-04-2016 IPR009309 Uncharacterised protein family UPF0297 SHYC_RS04065 2a52ab45b470e335089da4f5192905a0 291 Gene3D G3DSA:3.40.50.300 2 207 1.4E-53 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS04065 2a52ab45b470e335089da4f5192905a0 291 Pfam PF00005 ABC transporter 16 148 1.0E-23 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS04065 2a52ab45b470e335089da4f5192905a0 291 PANTHER PTHR24220 2 248 5.9E-95 T 23-04-2016 SHYC_RS04065 2a52ab45b470e335089da4f5192905a0 291 PANTHER PTHR24220:SF453 2 248 5.9E-95 T 23-04-2016 SHYC_RS04065 2a52ab45b470e335089da4f5192905a0 291 SMART SM00382 25 196 5.3E-6 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS04065 2a52ab45b470e335089da4f5192905a0 291 SUPERFAMILY SSF52540 2 206 1.55E-49 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06820 cf5e933a70a03212305ed0cb7f381db7 325 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 151 314 9.3E-46 T 23-04-2016 IPR021062 Putative aromatic acid exporter, C-terminal SHYC_RS06820 cf5e933a70a03212305ed0cb7f381db7 325 Pfam PF06081 Aromatic acid exporter family member 1 8 147 2.5E-42 T 23-04-2016 IPR010343 Aromatic acid exporter family member 1 SHYC_RS06820 cf5e933a70a03212305ed0cb7f381db7 325 PANTHER PTHR40064 7 325 2.1E-113 T 23-04-2016 SHYC_RS06820 cf5e933a70a03212305ed0cb7f381db7 325 PANTHER PTHR40064:SF1 7 325 2.1E-113 T 23-04-2016 SHYC_RS06765 ee37a7adbb189b23638bce315484f96e 294 PANTHER PTHR12001:SF23 6 276 3.4E-104 T 23-04-2016 SHYC_RS06765 ee37a7adbb189b23638bce315484f96e 294 PANTHER PTHR12001 6 276 3.4E-104 T 23-04-2016 IPR017446 Polyprenyl synthetase-related SHYC_RS06765 ee37a7adbb189b23638bce315484f96e 294 Pfam PF00348 Polyprenyl synthetase 29 264 2.9E-58 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHYC_RS06765 ee37a7adbb189b23638bce315484f96e 294 SUPERFAMILY SSF48576 5 286 6.48E-84 T 23-04-2016 IPR008949 Isoprenoid synthase domain SHYC_RS06765 ee37a7adbb189b23638bce315484f96e 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 211 223 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHYC_RS06765 ee37a7adbb189b23638bce315484f96e 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 80 96 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHYC_RS06765 ee37a7adbb189b23638bce315484f96e 294 Gene3D G3DSA:1.10.600.10 5 287 8.3E-86 T 23-04-2016 IPR008949 Isoprenoid synthase domain SHYC_RS06115 6b9153f2f3e64699ff4aaa73fb7d31d5 227 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 175 180 - T 23-04-2016 IPR020891 Uncharacterised protein family UPF0758, conserved site SHYC_RS06115 6b9153f2f3e64699ff4aaa73fb7d31d5 227 TIGRFAM TIGR00608 radc: DNA repair protein RadC 12 217 2.8E-65 T 23-04-2016 IPR001405 RadC protein SHYC_RS06115 6b9153f2f3e64699ff4aaa73fb7d31d5 227 Pfam PF04002 RadC-like JAB domain 105 216 5.9E-42 T 23-04-2016 IPR025657 RadC-like JAB domain SHYC_RS06115 6b9153f2f3e64699ff4aaa73fb7d31d5 227 PANTHER PTHR30471:SF3 1 222 1.5E-92 T 23-04-2016 SHYC_RS06115 6b9153f2f3e64699ff4aaa73fb7d31d5 227 Gene3D G3DSA:3.40.140.10 103 217 7.0E-44 T 23-04-2016 SHYC_RS06115 6b9153f2f3e64699ff4aaa73fb7d31d5 227 PANTHER PTHR30471 1 222 1.5E-92 T 23-04-2016 SHYC_RS06115 6b9153f2f3e64699ff4aaa73fb7d31d5 227 SUPERFAMILY SSF102712 135 194 5.36E-6 T 23-04-2016 SHYC_RS06345 e9080516c53f67bd7b93ad9b8d8ca8e7 412 PANTHER PTHR11706:SF2 1 226 1.8E-101 T 23-04-2016 SHYC_RS06345 e9080516c53f67bd7b93ad9b8d8ca8e7 412 PANTHER PTHR11706 1 226 1.8E-101 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS06345 e9080516c53f67bd7b93ad9b8d8ca8e7 412 Pfam PF01566 Natural resistance-associated macrophage protein 55 379 3.5E-26 T 23-04-2016 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: REACT_15518 SHYC_RS06140 0db52eb278bced0a6e30a884304c6f8f 106 SUPERFAMILY SSF118010 1 106 8.63E-34 T 23-04-2016 SHYC_RS06140 0db52eb278bced0a6e30a884304c6f8f 106 Gene3D G3DSA:3.30.70.1490 9 104 2.9E-16 T 23-04-2016 SHYC_RS06140 0db52eb278bced0a6e30a884304c6f8f 106 PANTHER PTHR39178 2 106 2.2E-37 T 23-04-2016 SHYC_RS06140 0db52eb278bced0a6e30a884304c6f8f 106 Pfam PF04327 Cysteine peptidase C108, N-terminal of ribosomal L27 1 102 3.5E-26 T 23-04-2016 IPR007422 Cysteine peptidase C108, N-terminal of ribosomal L27 SHYC_RS03940 fd5fba9056b5fca69227c5cc69f00b31 221 PANTHER PTHR11735 1 128 8.2E-44 T 23-04-2016 SHYC_RS03940 fd5fba9056b5fca69227c5cc69f00b31 221 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 205 4.9E-50 T 23-04-2016 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ GO:0002949 SHYC_RS03940 fd5fba9056b5fca69227c5cc69f00b31 221 SUPERFAMILY SSF53067 108 203 1.39E-10 T 23-04-2016 SHYC_RS03940 fd5fba9056b5fca69227c5cc69f00b31 221 Gene3D G3DSA:3.30.420.40 1 131 5.2E-39 T 23-04-2016 SHYC_RS03940 fd5fba9056b5fca69227c5cc69f00b31 221 SUPERFAMILY SSF53067 1 102 2.76E-28 T 23-04-2016 SHYC_RS03940 fd5fba9056b5fca69227c5cc69f00b31 221 Pfam PF00814 Glycoprotease family 30 169 9.2E-31 T 23-04-2016 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 SHYC_RS03940 fd5fba9056b5fca69227c5cc69f00b31 221 PANTHER PTHR11735:SF11 1 128 8.2E-44 T 23-04-2016 SHYC_RS07455 c24be710da0ea53365a0b4a1ae9ed895 79 PANTHER PTHR41297 6 77 1.5E-33 T 23-04-2016 SHYC_RS07455 c24be710da0ea53365a0b4a1ae9ed895 79 Pfam PF03672 Uncharacterised protein family (UPF0154) 14 73 6.3E-32 T 23-04-2016 IPR005359 Protein with unknown function UPF0154 SHYC_RS07455 c24be710da0ea53365a0b4a1ae9ed895 79 Gene3D G3DSA:1.10.238.10 43 78 1.6E-4 T 23-04-2016 IPR011992 EF-hand domain pair SHYC_RS07455 c24be710da0ea53365a0b4a1ae9ed895 79 Hamap MF_00363 UPF0154 protein . 6 76 23.24 T 23-04-2016 IPR005359 Protein with unknown function UPF0154 SHYC_RS07455 c24be710da0ea53365a0b4a1ae9ed895 79 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 5 61 6.0E-7 T 23-04-2016 IPR005359 Protein with unknown function UPF0154 SHYC_RS07455 c24be710da0ea53365a0b4a1ae9ed895 79 SUPERFAMILY SSF47473 39 78 6.11E-5 T 23-04-2016 IPR011992 EF-hand domain pair SHYC_RS07835 221400b03a9c46937113ec433fa54788 100 Gene3D G3DSA:3.30.1330.30 4 97 1.0E-22 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like SHYC_RS07835 221400b03a9c46937113ec433fa54788 100 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 9 94 6.7E-16 T 23-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 SHYC_RS07835 221400b03a9c46937113ec433fa54788 100 ProSitePatterns PS01082 Ribosomal protein L7Ae signature. 55 72 - T 23-04-2016 IPR004037 Ribosomal protein L7Ae conserved site GO:0030529|GO:0042254 Reactome: REACT_71 SHYC_RS07835 221400b03a9c46937113ec433fa54788 100 SUPERFAMILY SSF55315 4 99 6.09E-27 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like SHYC_RS04250 ba46a46d847bbca953cdec1a6c7829fb 179 Pfam PF11667 Putative zincin peptidase 58 156 1.9E-8 T 23-04-2016 IPR021683 Putative zincin peptidase SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 Pfam PF02073 Thermophilic metalloprotease (M29) 4 408 7.7E-168 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 2.6E-55 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 2.6E-55 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 2.6E-55 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 2.6E-55 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 14 31 2.6E-55 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 2.6E-55 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 2.6E-55 T 23-04-2016 IPR000787 Peptidase M29, aminopeptidase II GO:0004177|GO:0006508 SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 PANTHER PTHR34448 1 410 4.5E-220 T 23-04-2016 SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 PANTHER PTHR34448:SF3 1 410 4.5E-220 T 23-04-2016 SHYC_RS04335 77969ddbc630f505dd541fbd5f59a4b6 411 SUPERFAMILY SSF144052 4 409 3.92E-142 T 23-04-2016 SHYC_RS01895 1a9bcad84fa442f7889de6c31987e3d0 435 PANTHER PTHR30588 2 435 6.2E-143 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SHYC_RS01895 1a9bcad84fa442f7889de6c31987e3d0 435 Pfam PF05525 Branched-chain amino acid transport protein 4 426 2.2E-125 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SHYC_RS01895 1a9bcad84fa442f7889de6c31987e3d0 435 PANTHER PTHR30588:SF0 2 435 6.2E-143 T 23-04-2016 SHYC_RS01895 1a9bcad84fa442f7889de6c31987e3d0 435 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 9 413 2.0E-113 T 23-04-2016 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 SHYC_RS03585 1727ba10a80ae50a8521cc16b844c4b0 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 23-04-2016 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS03585 1727ba10a80ae50a8521cc16b844c4b0 475 PIRSF PIRSF036492 29 474 1.4E-84 T 23-04-2016 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0004030|GO:0006081|GO:0055114 SHYC_RS03585 1727ba10a80ae50a8521cc16b844c4b0 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 23-04-2016 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 SHYC_RS03585 1727ba10a80ae50a8521cc16b844c4b0 475 PANTHER PTHR11699 1 471 2.2E-290 T 23-04-2016 SHYC_RS03585 1727ba10a80ae50a8521cc16b844c4b0 475 SUPERFAMILY SSF53720 4 470 1.57E-156 T 23-04-2016 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 SHYC_RS03585 1727ba10a80ae50a8521cc16b844c4b0 475 Gene3D G3DSA:3.40.605.10 4 258 9.7E-87 T 23-04-2016 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS03585 1727ba10a80ae50a8521cc16b844c4b0 475 Pfam PF00171 Aldehyde dehydrogenase family 13 470 1.1E-167 T 23-04-2016 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 SHYC_RS03585 1727ba10a80ae50a8521cc16b844c4b0 475 Gene3D G3DSA:3.40.309.10 259 445 9.6E-71 T 23-04-2016 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0008152|GO:0016491|GO:0016620|GO:0055114 SHYC_RS03585 1727ba10a80ae50a8521cc16b844c4b0 475 PANTHER PTHR11699:SF214 1 471 2.2E-290 T 23-04-2016 SHYC_RS07365 2f9ba4d7567c7abe7c60d3cea59f074b 323 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 96 239 1.0E-32 T 23-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SHYC_RS07365 2f9ba4d7567c7abe7c60d3cea59f074b 323 PANTHER PTHR33392 1 323 1.9E-85 T 23-04-2016 SHYC_RS07365 2f9ba4d7567c7abe7c60d3cea59f074b 323 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 96 239 1.2E-46 T 23-04-2016 IPR004474 Cell envelope-related transcriptional attenuator domain SHYC_RS07365 2f9ba4d7567c7abe7c60d3cea59f074b 323 PANTHER PTHR33392:SF6 1 323 1.9E-85 T 23-04-2016 SHYC_RS02500 d12d812ebb4337e11a6ac12018b3f9aa 138 SUPERFAMILY SSF55729 13 126 8.02E-24 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS02500 d12d812ebb4337e11a6ac12018b3f9aa 138 PANTHER PTHR13355:SF5 26 121 1.9E-17 T 23-04-2016 SHYC_RS02500 d12d812ebb4337e11a6ac12018b3f9aa 138 PANTHER PTHR13355 26 121 1.9E-17 T 23-04-2016 SHYC_RS02500 d12d812ebb4337e11a6ac12018b3f9aa 138 Pfam PF13673 Acetyltransferase (GNAT) domain 36 126 2.9E-13 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS02500 d12d812ebb4337e11a6ac12018b3f9aa 138 Gene3D G3DSA:3.40.630.30 13 130 3.4E-29 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS08390 7b658ea7d7e8cb51be69436e26703835 203 SUPERFAMILY SSF81343 4 202 2.62E-60 T 23-04-2016 SHYC_RS08390 7b658ea7d7e8cb51be69436e26703835 203 Gene3D G3DSA:1.20.950.10 3 202 5.7E-59 T 23-04-2016 SHYC_RS08390 7b658ea7d7e8cb51be69436e26703835 203 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 92 192 1.4E-14 T 23-04-2016 IPR000701 Succinate dehydrogenase/Fumarate reductase, transmembrane subunit GO:0016627 UniPathway: UPA00223 SHYC_RS08390 7b658ea7d7e8cb51be69436e26703835 203 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 7 203 3.5E-48 T 23-04-2016 IPR011138 Succinate dehydrogenase cytochrome b558 subunit UniPathway: UPA00223 SHYC_RS08390 7b658ea7d7e8cb51be69436e26703835 203 PIRSF PIRSF000170 2 203 4.8E-96 T 23-04-2016 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute UniPathway: UPA00223 SHYC_RS02335 c67f07f4998a75ef622309cd29b0a35c 508 PIRSF PIRSF002457 1 508 1.1E-128 T 23-04-2016 IPR030676 Citrate carrier CitT-related SHYC_RS02335 c67f07f4998a75ef622309cd29b0a35c 508 Pfam PF00939 Sodium:sulfate symporter transmembrane region 22 508 1.3E-103 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SHYC_RS02335 c67f07f4998a75ef622309cd29b0a35c 508 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 33 502 4.1E-72 T 23-04-2016 IPR001898 Sodium/sulphate symporter GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: REACT_15518|Reactome: REACT_20633 SHYC_RS02335 c67f07f4998a75ef622309cd29b0a35c 508 PANTHER PTHR10283:SF82 7 76 5.9E-81 T 23-04-2016 SHYC_RS02335 c67f07f4998a75ef622309cd29b0a35c 508 PANTHER PTHR10283:SF82 97 505 5.9E-81 T 23-04-2016 SHYC_RS02335 c67f07f4998a75ef622309cd29b0a35c 508 PANTHER PTHR10283 7 76 5.9E-81 T 23-04-2016 SHYC_RS02335 c67f07f4998a75ef622309cd29b0a35c 508 PANTHER PTHR10283 97 505 5.9E-81 T 23-04-2016 SHYC_RS00080 d0c6fa7cd88b7662fd85bde5325cfa6e 269 Pfam PF06386 Gas vesicle synthesis protein GvpL/GvpF 5 266 1.3E-50 T 23-04-2016 IPR009430 Gas vesicle protein GvpL/GvpF GO:0031411|GO:0031412 SHYC_RS00080 d0c6fa7cd88b7662fd85bde5325cfa6e 269 PANTHER PTHR36852 1 265 2.0E-53 T 23-04-2016 SHYC_RS00080 d0c6fa7cd88b7662fd85bde5325cfa6e 269 PANTHER PTHR36852:SF1 1 265 2.0E-53 T 23-04-2016 SHYC_RS02400 0e703c74c48be0e5cfd404a7211b6f9b 225 SUPERFAMILY SSF103501 1 223 1.05E-69 T 23-04-2016 IPR023234 NarG-like domain SHYC_RS02400 0e703c74c48be0e5cfd404a7211b6f9b 225 PANTHER PTHR30598:SF3 1 225 1.0E-111 T 23-04-2016 SHYC_RS02400 0e703c74c48be0e5cfd404a7211b6f9b 225 PANTHER PTHR30598 1 225 1.0E-111 T 23-04-2016 SHYC_RS02400 0e703c74c48be0e5cfd404a7211b6f9b 225 Pfam PF02665 Nitrate reductase gamma subunit 3 222 1.2E-86 T 23-04-2016 IPR023234 NarG-like domain SHYC_RS02400 0e703c74c48be0e5cfd404a7211b6f9b 225 Gene3D G3DSA:1.20.950.20 1 214 2.8E-75 T 23-04-2016 SHYC_RS02400 0e703c74c48be0e5cfd404a7211b6f9b 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 223 9.4E-72 T 23-04-2016 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 SHYC_RS11290 852452a0049cbfe09a13b103c2ce1843 291 Pfam PF05257 CHAP domain 186 267 4.5E-15 T 23-04-2016 IPR007921 CHAP domain SHYC_RS11290 852452a0049cbfe09a13b103c2ce1843 291 SUPERFAMILY SSF54001 182 279 4.51E-19 T 23-04-2016 SHYC_RS11290 852452a0049cbfe09a13b103c2ce1843 291 PANTHER PTHR33308 106 279 5.8E-45 T 23-04-2016 SHYC_RS11290 852452a0049cbfe09a13b103c2ce1843 291 PANTHER PTHR33308:SF2 106 279 5.8E-45 T 23-04-2016 SHYC_RS07485 e3e5130b01ebfa4aff130cd2259a6b3e 271 Pfam PF14504 CAP-associated N-terminal 1 135 8.6E-33 T 23-04-2016 IPR029410 CAP-associated domain SHYC_RS07485 e3e5130b01ebfa4aff130cd2259a6b3e 271 PANTHER PTHR31157:SF1 1 269 7.8E-55 T 23-04-2016 SHYC_RS07485 e3e5130b01ebfa4aff130cd2259a6b3e 271 Gene3D G3DSA:3.40.33.10 150 270 5.4E-10 T 23-04-2016 IPR014044 CAP domain SHYC_RS07485 e3e5130b01ebfa4aff130cd2259a6b3e 271 PANTHER PTHR31157 1 269 7.8E-55 T 23-04-2016 SHYC_RS07485 e3e5130b01ebfa4aff130cd2259a6b3e 271 Pfam PF00188 Cysteine-rich secretory protein family 154 269 1.1E-14 T 23-04-2016 IPR014044 CAP domain SHYC_RS07485 e3e5130b01ebfa4aff130cd2259a6b3e 271 SUPERFAMILY SSF55797 146 269 1.2E-21 T 23-04-2016 IPR014044 CAP domain SHYC_RS02640 bf909c2b76b9b503e235f923e1cff75e 224 Pfam PF05656 Protein of unknown function (DUF805) 20 172 8.7E-20 T 23-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 SHYC_RS02640 bf909c2b76b9b503e235f923e1cff75e 224 PANTHER PTHR34980:SF2 129 177 1.6E-25 T 23-04-2016 SHYC_RS02640 bf909c2b76b9b503e235f923e1cff75e 224 PANTHER PTHR34980:SF2 5 106 1.6E-25 T 23-04-2016 SHYC_RS02640 bf909c2b76b9b503e235f923e1cff75e 224 PANTHER PTHR34980 129 177 1.6E-25 T 23-04-2016 SHYC_RS02640 bf909c2b76b9b503e235f923e1cff75e 224 PANTHER PTHR34980 5 106 1.6E-25 T 23-04-2016 SHYC_RS07355 a5bc0c8025bce702179cb7d1fb46e564 136 Pfam PF07070 SpoOM protein 3 126 3.5E-15 T 23-04-2016 IPR009776 Sporulation stage 0, protein M SHYC_RS03355 8b04419613b6519dea7e9fb2a5e9dd4c 396 PANTHER PTHR11952:SF2 4 393 2.2E-121 T 23-04-2016 SHYC_RS03355 8b04419613b6519dea7e9fb2a5e9dd4c 396 Gene3D G3DSA:3.90.550.10 5 393 1.4E-114 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS03355 8b04419613b6519dea7e9fb2a5e9dd4c 396 PANTHER PTHR11952 4 393 2.2E-121 T 23-04-2016 IPR002618 UDPGP family GO:0008152|GO:0070569 SHYC_RS03355 8b04419613b6519dea7e9fb2a5e9dd4c 396 Pfam PF01704 UTP--glucose-1-phosphate uridylyltransferase 57 375 1.8E-39 T 23-04-2016 IPR002618 UDPGP family GO:0008152|GO:0070569 SHYC_RS03355 8b04419613b6519dea7e9fb2a5e9dd4c 396 SUPERFAMILY SSF53448 5 393 1.58E-116 T 23-04-2016 IPR029044 Nucleotide-diphospho-sugar transferases SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 342 40.576 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 SUPERFAMILY SSF56059 129 345 6.01E-58 T 23-04-2016 SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 PIRSF PIRSF039102 1 350 2.9E-110 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 96 107 - T 23-04-2016 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 PANTHER PTHR23132:SF8 1 356 2.9E-177 T 23-04-2016 SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 SUPERFAMILY SSF52440 4 128 8.92E-34 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 Pfam PF07478 D-ala D-ala ligase C-terminus 136 339 2.0E-74 T 23-04-2016 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 PANTHER PTHR23132 1 356 2.9E-177 T 23-04-2016 SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 Gene3D G3DSA:3.30.470.20 216 355 4.5E-49 T 23-04-2016 IPR013816 ATP-grasp fold, subdomain 2 GO:0005524 SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 Gene3D G3DSA:3.30.1490.20 151 215 1.4E-22 T 23-04-2016 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 Gene3D G3DSA:3.40.50.20 1 118 6.7E-32 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 341 7.3E-107 T 23-04-2016 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03785 733ff1a7ebc8d655f2e065531fbb31dc 356 Pfam PF01820 D-ala D-ala ligase N-terminus 6 118 1.3E-30 T 23-04-2016 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|UniPathway: UPA00219 SHYC_RS03210 9adf0fc87b70f3d2c096a5692263f387 267 PANTHER PTHR33514:SF2 3 267 4.3E-126 T 23-04-2016 SHYC_RS03210 9adf0fc87b70f3d2c096a5692263f387 267 PANTHER PTHR33514 3 267 4.3E-126 T 23-04-2016 SHYC_RS03210 9adf0fc87b70f3d2c096a5692263f387 267 Pfam PF02361 Cobalt transport protein 15 230 9.4E-49 T 23-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SHYC_RS03210 9adf0fc87b70f3d2c096a5692263f387 267 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 265 34.569 T 23-04-2016 IPR024919 ECF transporter transmembrane protein EcfT GO:0005215|GO:0006810|GO:0016021 SHYC_RS01940 9b5568805ee2ab7cf81a5217fb174ca1 145 SMART SM00347 29 129 6.0E-14 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS01940 9b5568805ee2ab7cf81a5217fb174ca1 145 SUPERFAMILY SSF46785 10 140 3.35E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01940 9b5568805ee2ab7cf81a5217fb174ca1 145 Gene3D G3DSA:1.10.10.10 4 140 1.5E-36 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS01940 9b5568805ee2ab7cf81a5217fb174ca1 145 PANTHER PTHR33164:SF5 4 139 2.6E-34 T 23-04-2016 SHYC_RS01940 9b5568805ee2ab7cf81a5217fb174ca1 145 PANTHER PTHR33164 4 139 2.6E-34 T 23-04-2016 SHYC_RS01940 9b5568805ee2ab7cf81a5217fb174ca1 145 Pfam PF01047 MarR family 36 93 9.6E-11 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS03320 748c682a96f27e6a7eb2635ff0032b4a 587 PANTHER PTHR34384:SF3 3 587 5.7E-119 T 23-04-2016 SHYC_RS03320 748c682a96f27e6a7eb2635ff0032b4a 587 PANTHER PTHR34384 3 587 5.7E-119 T 23-04-2016 SHYC_RS03320 748c682a96f27e6a7eb2635ff0032b4a 587 Pfam PF04183 IucA / IucC family 160 384 1.6E-48 T 23-04-2016 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0015343|GO:0019290 SHYC_RS03320 748c682a96f27e6a7eb2635ff0032b4a 587 Pfam PF06276 Ferric iron reductase FhuF-like transporter 414 570 1.7E-26 T 23-04-2016 IPR022770 Ferric iron reductase FhuF domain SHYC_RS10265 627cd52f38a07117213e0447845562ee 240 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 58 221 4.3E-55 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 SHYC_RS10265 627cd52f38a07117213e0447845562ee 240 PANTHER PTHR34136 1 236 5.0E-86 T 23-04-2016 SHYC_RS10265 627cd52f38a07117213e0447845562ee 240 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 53 228 2.8E-51 T 23-04-2016 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|UniPathway: UPA00566 SHYC_RS10265 627cd52f38a07117213e0447845562ee 240 PANTHER PTHR34136:SF1 1 236 5.0E-86 T 23-04-2016 SHYC_RS09615 aafa00741f5310950daf0babf21b733b 67 Pfam PF05154 TM2 domain 3 52 5.5E-16 T 23-04-2016 IPR007829 TM2 domain SHYC_RS08355 db150346791fd6fc47dcd6841103a014 286 SUPERFAMILY SSF51261 161 253 1.7E-23 T 23-04-2016 IPR011055 Duplicated hybrid motif SHYC_RS08355 db150346791fd6fc47dcd6841103a014 286 PANTHER PTHR21666 166 285 3.4E-20 T 23-04-2016 SHYC_RS08355 db150346791fd6fc47dcd6841103a014 286 Pfam PF01551 Peptidase family M23 162 254 1.7E-18 T 23-04-2016 IPR016047 Peptidase M23 SHYC_RS08355 db150346791fd6fc47dcd6841103a014 286 PANTHER PTHR21666:SF198 166 285 3.4E-20 T 23-04-2016 SHYC_RS08355 db150346791fd6fc47dcd6841103a014 286 Gene3D G3DSA:2.70.70.10 105 255 1.5E-24 T 23-04-2016 SHYC_RS02590 320d478bb7ca52ec22e814a148be503b 301 Pfam PF07859 alpha/beta hydrolase fold 78 279 1.7E-32 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 SHYC_RS02590 320d478bb7ca52ec22e814a148be503b 301 SUPERFAMILY SSF53474 77 297 1.4E-29 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS02590 320d478bb7ca52ec22e814a148be503b 301 PANTHER PTHR23024:SF47 78 300 5.0E-36 T 23-04-2016 SHYC_RS02590 320d478bb7ca52ec22e814a148be503b 301 PANTHER PTHR23024 78 300 5.0E-36 T 23-04-2016 SHYC_RS02590 320d478bb7ca52ec22e814a148be503b 301 Gene3D G3DSA:3.40.50.1820 78 299 3.2E-33 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS09645 bbe5c7082d1b7465cef0bed8c222a9f2 335 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 6 314 7.4E-124 T 23-04-2016 IPR010119 Gluconeogenesis factor SHYC_RS09645 bbe5c7082d1b7465cef0bed8c222a9f2 335 PANTHER PTHR30135:SF3 1 327 8.2E-154 T 23-04-2016 SHYC_RS09645 bbe5c7082d1b7465cef0bed8c222a9f2 335 Pfam PF01933 Uncharacterised protein family UPF0052 6 287 4.9E-105 T 23-04-2016 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 SHYC_RS09645 bbe5c7082d1b7465cef0bed8c222a9f2 335 Hamap MF_00973 Gluconeogenesis factor. 2 317 34.151 T 23-04-2016 IPR010119 Gluconeogenesis factor SHYC_RS09645 bbe5c7082d1b7465cef0bed8c222a9f2 335 PANTHER PTHR30135 1 327 8.2E-154 T 23-04-2016 SHYC_RS09645 bbe5c7082d1b7465cef0bed8c222a9f2 335 SUPERFAMILY SSF142338 3 312 3.53E-98 T 23-04-2016 SHYC_RS09645 bbe5c7082d1b7465cef0bed8c222a9f2 335 Gene3D G3DSA:3.40.50.10680 76 315 3.3E-52 T 23-04-2016 SHYC_RS10900 655537aa471e3f1caf8666720281469f 263 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 40 53 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 SHYC_RS10900 655537aa471e3f1caf8666720281469f 263 PANTHER PTHR20941:SF1 4 261 5.6E-107 T 23-04-2016 SHYC_RS10900 655537aa471e3f1caf8666720281469f 263 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 5 255 1.0E-91 T 23-04-2016 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614|UniPathway: UPA00077 SHYC_RS10900 655537aa471e3f1caf8666720281469f 263 SUPERFAMILY SSF51717 3 258 4.71E-88 T 23-04-2016 IPR011005 Dihydropteroate synthase-like GO:0044237 SHYC_RS10900 655537aa471e3f1caf8666720281469f 263 Pfam PF00809 Pterin binding enzyme 7 241 7.2E-82 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 SHYC_RS10900 655537aa471e3f1caf8666720281469f 263 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 6 21 - T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 SHYC_RS10900 655537aa471e3f1caf8666720281469f 263 PANTHER PTHR20941 4 261 5.6E-107 T 23-04-2016 SHYC_RS10900 655537aa471e3f1caf8666720281469f 263 Gene3D G3DSA:3.20.20.20 3 258 3.4E-99 T 23-04-2016 IPR000489 Pterin-binding domain GO:0042558 SHYC_RS04865 943f26b58c15fa57dc7afce30668b57d 187 Gene3D G3DSA:3.40.30.10 26 187 4.8E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS04865 943f26b58c15fa57dc7afce30668b57d 187 SUPERFAMILY SSF52833 26 186 9.2E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS04865 943f26b58c15fa57dc7afce30668b57d 187 PANTHER PTHR13887 30 187 1.7E-22 T 23-04-2016 SHYC_RS04865 943f26b58c15fa57dc7afce30668b57d 187 Pfam PF13462 Thioredoxin 26 187 1.4E-30 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS00735 b192d0c793bff554fa803d070a345daa 288 Gene3D G3DSA:3.40.50.1820 41 287 1.0E-87 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00735 b192d0c793bff554fa803d070a345daa 288 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 37 288 1.5E-87 T 23-04-2016 IPR010315 Protein of unknown function DUF915, hydrolase-like SHYC_RS00735 b192d0c793bff554fa803d070a345daa 288 SUPERFAMILY SSF53474 44 281 1.6E-14 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS04040 e8424e9e213110ed3e11f3bef0a822ba 153 PANTHER PTHR39203 1 148 3.7E-36 T 23-04-2016 SHYC_RS04040 e8424e9e213110ed3e11f3bef0a822ba 153 PIRSF PIRSF021320 1 148 3.0E-50 T 23-04-2016 IPR009326 Protein of unknown function DUF984 SHYC_RS04040 e8424e9e213110ed3e11f3bef0a822ba 153 Pfam PF04266 ASCH domain 30 144 2.6E-23 T 23-04-2016 IPR007374 ASCH domain SHYC_RS04040 e8424e9e213110ed3e11f3bef0a822ba 153 SMART SM01022 25 145 5.4E-35 T 23-04-2016 IPR007374 ASCH domain SHYC_RS04040 e8424e9e213110ed3e11f3bef0a822ba 153 SUPERFAMILY SSF88697 2 146 8.7E-49 T 23-04-2016 IPR015947 PUA-like domain SHYC_RS04040 e8424e9e213110ed3e11f3bef0a822ba 153 Gene3D G3DSA:3.10.400.10 2 147 5.0E-53 T 23-04-2016 SHYC_RS06880 a14f11e405ef202aeefb3db5dc08b343 167 PANTHER PTHR34796 3 167 2.3E-14 T 23-04-2016 SHYC_RS06880 a14f11e405ef202aeefb3db5dc08b343 167 SUPERFAMILY SSF140663 2 130 1.29E-22 T 23-04-2016 IPR023203 TTHA0068-like domain SHYC_RS06880 a14f11e405ef202aeefb3db5dc08b343 167 Gene3D G3DSA:1.10.3450.10 2 109 3.8E-18 T 23-04-2016 IPR023203 TTHA0068-like domain SHYC_RS06880 a14f11e405ef202aeefb3db5dc08b343 167 Pfam PF03745 Domain of unknown function (DUF309) 5 64 9.9E-18 T 23-04-2016 IPR005500 Protein of unknown function DUF309 SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 122 139 - T 23-04-2016 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 Gene3D G3DSA:3.20.20.100 3 265 7.3E-91 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 Pfam PF00248 Aldo/keto reductase family 15 258 2.1E-42 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 PRINTS PR00069 Aldo-keto reductase signature 122 139 7.7E-44 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 PRINTS PR00069 Aldo-keto reductase signature 156 185 7.7E-44 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 PRINTS PR00069 Aldo-keto reductase signature 34 58 7.7E-44 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 PRINTS PR00069 Aldo-keto reductase signature 90 108 7.7E-44 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 PRINTS PR00069 Aldo-keto reductase signature 194 218 7.7E-44 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 PIRSF PIRSF000097 1 274 8.4E-75 T 23-04-2016 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 PANTHER PTHR11732 2 274 2.5E-114 T 23-04-2016 IPR001395 Aldo/keto reductase/potassium channel subunit beta SHYC_RS06240 29f155a608db0b92f1840ffbdb851599 276 SUPERFAMILY SSF51430 3 260 5.11E-84 T 23-04-2016 IPR023210 NADP-dependent oxidoreductase domain SHYC_RS07755 76c00a62b354750de04a2fda120ac9f0 131 Pfam PF13413 Helix-turn-helix domain 8 66 1.6E-16 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS07755 76c00a62b354750de04a2fda120ac9f0 131 PANTHER PTHR34475:SF1 1 131 5.3E-18 T 23-04-2016 SHYC_RS07755 76c00a62b354750de04a2fda120ac9f0 131 SUPERFAMILY SSF47413 2 75 3.38E-8 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS07755 76c00a62b354750de04a2fda120ac9f0 131 Gene3D G3DSA:1.10.260.40 3 92 1.8E-10 T 23-04-2016 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 SHYC_RS07755 76c00a62b354750de04a2fda120ac9f0 131 PANTHER PTHR34475 1 131 5.3E-18 T 23-04-2016 SHYC_RS07755 76c00a62b354750de04a2fda120ac9f0 131 SMART SM00530 7 68 3.3E-4 T 23-04-2016 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 SHYC_RS01295 9956dfa74347b4a87de6f9bddc00c0bf 395 SUPERFAMILY SSF103473 7 390 4.71E-63 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS01295 9956dfa74347b4a87de6f9bddc00c0bf 395 Pfam PF07690 Major Facilitator Superfamily 13 350 3.3E-42 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS01295 9956dfa74347b4a87de6f9bddc00c0bf 395 Gene3D G3DSA:1.20.1250.20 9 189 4.7E-32 T 23-04-2016 SHYC_RS01295 9956dfa74347b4a87de6f9bddc00c0bf 395 Gene3D G3DSA:1.20.1250.20 202 391 1.4E-14 T 23-04-2016 SHYC_RS01295 9956dfa74347b4a87de6f9bddc00c0bf 395 PANTHER PTHR23501 9 390 1.4E-51 T 23-04-2016 SHYC_RS10920 15eacac22963bd3a1dbca548d095d234 179 SUPERFAMILY SSF53271 2 178 3.93E-56 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS10920 15eacac22963bd3a1dbca548d095d234 179 PANTHER PTHR22573 3 179 1.2E-76 T 23-04-2016 SHYC_RS10920 15eacac22963bd3a1dbca548d095d234 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 1.7E-64 T 23-04-2016 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620|UniPathway: UPA00591 SHYC_RS10920 15eacac22963bd3a1dbca548d095d234 179 Gene3D G3DSA:3.40.50.2020 1 178 4.8E-77 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS10920 15eacac22963bd3a1dbca548d095d234 179 Pfam PF00156 Phosphoribosyl transferase domain 10 159 1.7E-26 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHYC_RS10920 15eacac22963bd3a1dbca548d095d234 179 PANTHER PTHR22573:SF56 3 179 1.2E-76 T 23-04-2016 SHYC_RS07445 bb9844a7cc20c845ac8ef5c1ed596b28 372 PANTHER PTHR30337 1 372 7.8E-74 T 23-04-2016 SHYC_RS07445 bb9844a7cc20c845ac8ef5c1ed596b28 372 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 262 347 8.9E-7 T 23-04-2016 IPR026843 Nuclease SbcCD subunit D, C-terminal domain SHYC_RS07445 bb9844a7cc20c845ac8ef5c1ed596b28 372 PANTHER PTHR30337:SF0 1 372 7.8E-74 T 23-04-2016 SHYC_RS07445 bb9844a7cc20c845ac8ef5c1ed596b28 372 SUPERFAMILY SSF56300 1 304 4.27E-51 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS07445 bb9844a7cc20c845ac8ef5c1ed596b28 372 Pfam PF00149 Calcineurin-like phosphoesterase 1 213 2.4E-15 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHYC_RS07445 bb9844a7cc20c845ac8ef5c1ed596b28 372 Gene3D G3DSA:3.60.21.10 1 259 8.3E-57 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS07445 bb9844a7cc20c845ac8ef5c1ed596b28 372 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 240 9.4E-49 T 23-04-2016 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 SHYC_RS00540 7ec62308cde459444a708d360fc2da68 257 Pfam PF04507 Protein of unknown function, DUF576 1 253 1.4E-107 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS00540 7ec62308cde459444a708d360fc2da68 257 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 252 1.6E-91 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS11605 66be174ff0d5950751781fd6b8eb72d9 211 PANTHER PTHR15020:SF29 1 209 3.5E-52 T 23-04-2016 SHYC_RS11605 66be174ff0d5950751781fd6b8eb72d9 211 SUPERFAMILY SSF51735 1 209 1.97E-25 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS11605 66be174ff0d5950751781fd6b8eb72d9 211 PANTHER PTHR15020 1 209 3.5E-52 T 23-04-2016 SHYC_RS11605 66be174ff0d5950751781fd6b8eb72d9 211 Gene3D G3DSA:3.40.50.720 1 209 3.0E-21 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS11605 66be174ff0d5950751781fd6b8eb72d9 211 Pfam PF13460 NAD(P)H-binding 8 171 2.9E-18 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS08880 5401209cbcf07f0a67d66528473c615a 335 PANTHER PTHR37312 1 331 2.4E-64 T 23-04-2016 SHYC_RS08880 5401209cbcf07f0a67d66528473c615a 335 Pfam PF01757 Acyltransferase family 9 306 2.4E-19 T 23-04-2016 IPR002656 Acyltransferase 3 GO:0016747 SHYC_RS03440 df4363510e1495147472555437e75624 310 PANTHER PTHR37804 1 309 5.1E-55 T 23-04-2016 SHYC_RS03440 df4363510e1495147472555437e75624 310 Pfam PF07949 YbbR-like protein 47 127 2.2E-9 T 23-04-2016 IPR012505 YbbR-like SHYC_RS03440 df4363510e1495147472555437e75624 310 Pfam PF07949 YbbR-like protein 144 220 5.6E-8 T 23-04-2016 IPR012505 YbbR-like SHYC_RS03440 df4363510e1495147472555437e75624 310 Pfam PF07949 YbbR-like protein 229 307 1.3E-13 T 23-04-2016 IPR012505 YbbR-like SHYC_RS09335 3e78c7ea79bfbafba1e3ead0f656b9bd 119 SUPERFAMILY SSF89360 3 95 6.67E-27 T 23-04-2016 IPR000361 FeS cluster biogenesis SHYC_RS09335 3e78c7ea79bfbafba1e3ead0f656b9bd 119 PANTHER PTHR10072 4 117 5.7E-38 T 23-04-2016 SHYC_RS09335 3e78c7ea79bfbafba1e3ead0f656b9bd 119 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 104 5.0E-17 T 23-04-2016 IPR000361 FeS cluster biogenesis SHYC_RS09335 3e78c7ea79bfbafba1e3ead0f656b9bd 119 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 4 108 1.3E-33 T 23-04-2016 IPR016092 FeS cluster insertion protein GO:0005198|GO:0016226|GO:0051536 SHYC_RS09335 3e78c7ea79bfbafba1e3ead0f656b9bd 119 Gene3D G3DSA:2.60.300.12 4 97 6.6E-28 T 23-04-2016 IPR000361 FeS cluster biogenesis SHYC_RS09335 3e78c7ea79bfbafba1e3ead0f656b9bd 119 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 90 107 - T 23-04-2016 IPR017870 FeS cluster insertion, C-terminal, conserved site SHYC_RS01490 aa71a8f278db523dd2837fe4864e05b8 356 Gene3D G3DSA:3.60.21.30 79 337 1.2E-9 T 23-04-2016 SHYC_RS01490 aa71a8f278db523dd2837fe4864e05b8 356 PANTHER PTHR33393:SF2 63 286 3.4E-17 T 23-04-2016 SHYC_RS01490 aa71a8f278db523dd2837fe4864e05b8 356 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 64 286 2.4E-27 T 23-04-2016 IPR019079 Capsule synthesis protein, CapA SHYC_RS01490 aa71a8f278db523dd2837fe4864e05b8 356 SUPERFAMILY SSF56300 85 287 1.52E-17 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS01490 aa71a8f278db523dd2837fe4864e05b8 356 PANTHER PTHR33393 63 286 3.4E-17 T 23-04-2016 SHYC_RS01490 aa71a8f278db523dd2837fe4864e05b8 356 SMART SM00854 62 287 2.9E-21 T 23-04-2016 IPR019079 Capsule synthesis protein, CapA SHYC_RS02615 1f8064a2328928e0f76b3f2524e0376c 403 PANTHER PTHR36178:SF1 1 402 2.5E-179 T 23-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 SHYC_RS02615 1f8064a2328928e0f76b3f2524e0376c 403 PANTHER PTHR36178 1 402 2.5E-179 T 23-04-2016 SHYC_RS02615 1f8064a2328928e0f76b3f2524e0376c 403 Pfam PF03616 Sodium/glutamate symporter 2 370 3.8E-132 T 23-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 SHYC_RS02615 1f8064a2328928e0f76b3f2524e0376c 403 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 3 400 2.1E-103 T 23-04-2016 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 SHYC_RS06325 5bf26b15caa27c0bb3a5d1be650692f4 341 PANTHER PTHR18866 147 323 2.5E-30 T 23-04-2016 SHYC_RS06325 5bf26b15caa27c0bb3a5d1be650692f4 341 SMART SM00797 24 304 4.1E-101 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHYC_RS06325 5bf26b15caa27c0bb3a5d1be650692f4 341 PANTHER PTHR18866:SF74 147 323 2.5E-30 T 23-04-2016 SHYC_RS06325 5bf26b15caa27c0bb3a5d1be650692f4 341 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 307 7.0E-83 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHYC_RS06325 5bf26b15caa27c0bb3a5d1be650692f4 341 Pfam PF02626 Allophanate hydrolase subunit 2 26 286 4.2E-76 T 23-04-2016 IPR003778 Carboxyltransferase domain, subdomain A and B SHYC_RS10590 4a3df332e9567b7c12a2d9eedc225120 205 PANTHER PTHR10513:SF16 1 199 6.7E-91 T 23-04-2016 SHYC_RS10590 4a3df332e9567b7c12a2d9eedc225120 205 Pfam PF01712 Deoxynucleoside kinase 6 199 1.2E-43 T 23-04-2016 IPR031314 Deoxynucleoside kinase domain SHYC_RS10590 4a3df332e9567b7c12a2d9eedc225120 205 PIRSF PIRSF000705 1 204 1.0E-54 T 23-04-2016 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 SHYC_RS10590 4a3df332e9567b7c12a2d9eedc225120 205 SUPERFAMILY SSF52540 1 199 7.11E-40 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10590 4a3df332e9567b7c12a2d9eedc225120 205 PANTHER PTHR10513 1 199 6.7E-91 T 23-04-2016 SHYC_RS10590 4a3df332e9567b7c12a2d9eedc225120 205 Gene3D G3DSA:3.40.50.300 2 181 4.3E-43 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS08745 146b0a485168b494a5da120b0a405b5e 89 SUPERFAMILY SSF82697 2 79 1.12E-21 T 23-04-2016 SHYC_RS08745 146b0a485168b494a5da120b0a405b5e 89 PANTHER PTHR34696 1 85 1.4E-27 T 23-04-2016 SHYC_RS08745 146b0a485168b494a5da120b0a405b5e 89 Gene3D G3DSA:3.30.1280.10 2 79 3.7E-26 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08745 146b0a485168b494a5da120b0a405b5e 89 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 4 79 3.0E-24 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08745 146b0a485168b494a5da120b0a405b5e 89 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 80 7.0E-32 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08745 146b0a485168b494a5da120b0a405b5e 89 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 79 17.964 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS08745 146b0a485168b494a5da120b0a405b5e 89 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 4 79 1.2E-20 T 23-04-2016 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|UniPathway: UPA00074 SHYC_RS01255 7966b0a56f540b6fdd98440d87e3c5a5 147 PANTHER PTHR36203 3 144 5.6E-45 T 23-04-2016 SHYC_RS01255 7966b0a56f540b6fdd98440d87e3c5a5 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 144 8.0E-35 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS01255 7966b0a56f540b6fdd98440d87e3c5a5 147 Gene3D G3DSA:3.40.930.10 4 145 2.2E-52 T 23-04-2016 IPR002178 PTS EIIA type-2 domain KEGG: 00520+2.7.1.-|KEGG: 00540+2.7.1.-|KEGG: 00680+2.7.1.-|KEGG: 00900+2.7.1.- SHYC_RS01255 7966b0a56f540b6fdd98440d87e3c5a5 147 SUPERFAMILY SSF55804 3 145 2.49E-34 T 23-04-2016 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: REACT_15518 SHYC_RS08250 4cdb95b2cb05a3d4a290214a3cac3ab2 96 PANTHER PTHR33219 5 95 2.7E-27 T 23-04-2016 SHYC_RS08250 4cdb95b2cb05a3d4a290214a3cac3ab2 96 Pfam PF02325 YGGT family 15 82 1.7E-21 T 23-04-2016 IPR003425 CCB3/YggT GO:0016020 SHYC_RS11245 98a8083d8853405d20e2b5e7fd42fc8b 557 Pfam PF04740 LXG domain of WXG superfamily 7 192 2.5E-17 T 23-04-2016 IPR006829 LXG domain SHYC_RS05530 4267992eadea0a0a289a86332bf68cab 302 Pfam PF08378 Nuclease-related domain 115 178 3.6E-5 T 23-04-2016 IPR011528 Nuclease-related domain, NERD SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 SUPERFAMILY SSF47384 273 341 1.06E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 4.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 472 485 4.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 467 4.4E-7 T 23-04-2016 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 SUPERFAMILY SSF55874 330 490 5.76E-26 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 Gene3D G3DSA:3.30.565.10 324 492 5.5E-29 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 SMART SM00387 381 488 3.2E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 Pfam PF00512 His Kinase A (phospho-acceptor) domain 278 331 1.6E-9 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 386 486 4.5E-13 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 PANTHER PTHR24423 206 485 1.1E-36 T 23-04-2016 SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 PANTHER PTHR24423 132 139 1.1E-36 T 23-04-2016 SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 SMART SM00388 277 340 1.5E-7 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS01520 5477d4d725b620b47e6ac32f06a95b40 494 Gene3D G3DSA:1.10.287.130 278 323 7.2E-10 T 23-04-2016 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 SHYC_RS04840 82d253604496d21c9e5a181fc9c89eb6 110 Pfam PF00216 Bacterial DNA-binding protein 6 102 5.8E-11 T 23-04-2016 IPR000119 Histone-like DNA-binding protein GO:0003677 SHYC_RS04840 82d253604496d21c9e5a181fc9c89eb6 110 SUPERFAMILY SSF47729 13 103 3.24E-7 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SHYC_RS04840 82d253604496d21c9e5a181fc9c89eb6 110 Gene3D G3DSA:4.10.520.10 6 103 1.6E-10 T 23-04-2016 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 SHYC_RS11540 9d9abd5f0b61ae778813d0b5815f6f75 258 PANTHER PTHR30143 7 257 1.7E-51 T 23-04-2016 SHYC_RS11540 9d9abd5f0b61ae778813d0b5815f6f75 258 Gene3D G3DSA:3.90.850.10 2 257 4.1E-56 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SHYC_RS11540 9d9abd5f0b61ae778813d0b5815f6f75 258 SUPERFAMILY SSF56529 5 257 4.27E-48 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SHYC_RS09175 d575541804948df2ae4f43e5973a5175 102 PANTHER PTHR13696:SF62 1 99 6.1E-26 T 23-04-2016 SHYC_RS09175 d575541804948df2ae4f43e5973a5175 102 PANTHER PTHR13696 1 99 6.1E-26 T 23-04-2016 SHYC_RS09175 d575541804948df2ae4f43e5973a5175 102 Pfam PF01883 Domain of unknown function DUF59 6 80 6.0E-21 T 23-04-2016 IPR002744 Domain of unknown function DUF59 SHYC_RS09175 d575541804948df2ae4f43e5973a5175 102 SUPERFAMILY SSF117916 3 100 4.25E-33 T 23-04-2016 SHYC_RS00190 4995acebfb2cd72cadbe9d6dd6744484 260 SUPERFAMILY SSF56281 5 226 2.71E-40 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS00190 4995acebfb2cd72cadbe9d6dd6744484 260 PANTHER PTHR13754 1 256 2.0E-107 T 23-04-2016 SHYC_RS00190 4995acebfb2cd72cadbe9d6dd6744484 260 Gene3D G3DSA:3.60.15.10 6 227 1.9E-36 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS00190 4995acebfb2cd72cadbe9d6dd6744484 260 SMART SM00849 9 214 9.0E-12 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS00190 4995acebfb2cd72cadbe9d6dd6744484 260 PANTHER PTHR13754:SF15 1 256 2.0E-107 T 23-04-2016 SHYC_RS00190 4995acebfb2cd72cadbe9d6dd6744484 260 Pfam PF00753 Metallo-beta-lactamase superfamily 8 214 2.0E-20 T 23-04-2016 IPR001279 Metallo-beta-lactamase SHYC_RS10930 a9e7ddaf61b2a180d2c48e463aa24f8d 125 SUPERFAMILY SSF50249 4 86 1.58E-24 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS10930 a9e7ddaf61b2a180d2c48e463aa24f8d 125 PANTHER PTHR10724 3 125 3.3E-43 T 23-04-2016 SHYC_RS10930 a9e7ddaf61b2a180d2c48e463aa24f8d 125 SMART SM00316 4 74 7.7E-26 T 23-04-2016 IPR022967 RNA-binding domain, S1 SHYC_RS10930 a9e7ddaf61b2a180d2c48e463aa24f8d 125 Pfam PF00575 S1 RNA binding domain 4 74 3.5E-20 T 23-04-2016 IPR003029 S1 domain GO:0003676 SHYC_RS10930 a9e7ddaf61b2a180d2c48e463aa24f8d 125 Gene3D G3DSA:2.40.50.140 2 84 1.1E-27 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS09465 343e0022c3071d03ba4a06b8673982ca 231 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 231 4.4E-21 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09465 343e0022c3071d03ba4a06b8673982ca 231 Gene3D G3DSA:1.10.3720.10 20 230 5.7E-42 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09465 343e0022c3071d03ba4a06b8673982ca 231 SUPERFAMILY SSF161098 20 218 2.22E-45 T 23-04-2016 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 SHYC_RS09465 343e0022c3071d03ba4a06b8673982ca 231 PANTHER PTHR30450:SF1 5 231 3.5E-123 T 23-04-2016 SHYC_RS09465 343e0022c3071d03ba4a06b8673982ca 231 PANTHER PTHR30450 5 231 3.5E-123 T 23-04-2016 SHYC_RS00690 02b2be738c65bbabe2ef38b2fc5f1e07 356 PANTHER PTHR30590 1 356 1.1E-52 T 23-04-2016 SHYC_RS00690 02b2be738c65bbabe2ef38b2fc5f1e07 356 PANTHER PTHR30590:SF2 1 356 1.1E-52 T 23-04-2016 SHYC_RS00690 02b2be738c65bbabe2ef38b2fc5f1e07 356 Pfam PF04235 Protein of unknown function (DUF418) 204 356 4.8E-32 T 23-04-2016 IPR007349 Domain of unknown function DUF418 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 PANTHER PTHR10357:SF170 4 418 4.6E-280 T 23-04-2016 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 PANTHER PTHR10357:SF170 450 519 4.6E-280 T 23-04-2016 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 SUPERFAMILY SSF51011 474 538 2.31E-8 T 23-04-2016 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 SMART SM00642 13 413 8.4E-156 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 SUPERFAMILY SSF51445 4 471 3.63E-149 T 23-04-2016 IPR017853 Glycoside hydrolase superfamily SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 Gene3D G3DSA:2.60.40.1180 481 530 2.9E-8 T 23-04-2016 IPR013780 Glycosyl hydrolase, all-beta SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 Gene3D G3DSA:3.90.400.10 105 173 2.4E-29 T 23-04-2016 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 PANTHER PTHR10357 4 418 4.6E-280 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 PANTHER PTHR10357 450 519 4.6E-280 T 23-04-2016 IPR015902 Glycoside hydrolase, family 13 GO:0003824 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 Gene3D G3DSA:3.20.20.80 174 473 5.4E-122 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 Gene3D G3DSA:3.20.20.80 4 104 5.4E-122 T 23-04-2016 IPR013781 Glycoside hydrolase, catalytic domain GO:0005975 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 6 541 3.4E-241 T 23-04-2016 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 SHYC_RS11115 f34ff0d43ce6eb224b8477708dc6a741 546 Pfam PF00128 Alpha amylase, catalytic domain 28 371 2.6E-121 T 23-04-2016 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 SHYC_RS10605 f0d922f7279a884de5bfcb33a7991bb0 107 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 4 48 0.009 T 23-04-2016 SHYC_RS01310 d2cb855d82d4c45a868949af3cbb0994 297 PANTHER PTHR11627 11 183 3.5E-34 T 23-04-2016 SHYC_RS01310 d2cb855d82d4c45a868949af3cbb0994 297 Pfam PF00274 Fructose-bisphosphate aldolase class-I 9 211 2.4E-12 T 23-04-2016 IPR000741 Fructose-bisphosphate aldolase, class-I GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385|Reactome: REACT_474|UniPathway: UPA00109 SHYC_RS01310 d2cb855d82d4c45a868949af3cbb0994 297 Gene3D G3DSA:3.20.20.70 1 293 4.0E-97 T 23-04-2016 IPR013785 Aldolase-type TIM barrel GO:0003824 SHYC_RS01310 d2cb855d82d4c45a868949af3cbb0994 297 SUPERFAMILY SSF51569 4 295 1.36E-92 T 23-04-2016 SHYC_RS06095 35b44da2492b6c9bde29d89f2f9c4638 183 PANTHER PTHR30037:SF4 1 183 7.2E-87 T 23-04-2016 SHYC_RS06095 35b44da2492b6c9bde29d89f2f9c4638 183 Gene3D G3DSA:1.10.340.30 1 182 1.2E-67 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SHYC_RS06095 35b44da2492b6c9bde29d89f2f9c4638 183 Pfam PF03352 Methyladenine glycosylase 8 180 3.3E-65 T 23-04-2016 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 SHYC_RS06095 35b44da2492b6c9bde29d89f2f9c4638 183 SUPERFAMILY SSF48150 1 182 3.61E-67 T 23-04-2016 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: REACT_216 SHYC_RS06095 35b44da2492b6c9bde29d89f2f9c4638 183 PANTHER PTHR30037 1 183 7.2E-87 T 23-04-2016 SHYC_RS04010 91e965b4ae4af23aee5dab8b56d50623 265 Pfam PF00795 Carbon-nitrogen hydrolase 7 245 5.1E-48 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHYC_RS04010 91e965b4ae4af23aee5dab8b56d50623 265 SUPERFAMILY SSF56317 1 262 1.31E-70 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHYC_RS04010 91e965b4ae4af23aee5dab8b56d50623 265 PANTHER PTHR23088 1 265 5.7E-77 T 23-04-2016 SHYC_RS04010 91e965b4ae4af23aee5dab8b56d50623 265 Gene3D G3DSA:3.60.110.10 1 261 2.7E-76 T 23-04-2016 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 Pfam PF00149 Calcineurin-like phosphoesterase 4 200 1.6E-9 T 23-04-2016 IPR004843 Calcineurin-like phosphoesterase domain, apaH type GO:0016787 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 PANTHER PTHR11575:SF23 1 439 1.6E-179 T 23-04-2016 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 SUPERFAMILY SSF55816 281 436 4.58E-19 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 Gene3D G3DSA:3.90.780.10 281 434 9.7E-14 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 PRINTS PR01607 Apyrase family signature 210 230 4.9E-18 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 PRINTS PR01607 Apyrase family signature 315 338 4.9E-18 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 PRINTS PR01607 Apyrase family signature 182 205 4.9E-18 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 PRINTS PR01607 Apyrase family signature 163 180 4.9E-18 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 PRINTS PR01607 Apyrase family signature 1 15 4.9E-18 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 Gene3D G3DSA:3.60.21.10 2 245 1.2E-54 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 Pfam PF02872 5'-nucleotidase, C-terminal domain 281 404 1.6E-6 T 23-04-2016 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 SUPERFAMILY SSF56300 2 255 6.57E-61 T 23-04-2016 IPR029052 Metallo-dependent phosphatase-like SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 PANTHER PTHR11575 1 439 1.6E-179 T 23-04-2016 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 SHYC_RS09410 c9629ccbaa65000664df700437b2dab1 439 PIRSF PIRSF036361 1 439 1.8E-170 T 23-04-2016 IPR011240 Phosphoesterase-related protein YunD SHYC_RS08845 cb6b4c470a470e9923259e165a2db188 270 Pfam PF01061 ABC-2 type transporter 16 227 6.6E-20 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SHYC_RS08845 cb6b4c470a470e9923259e165a2db188 270 PANTHER PTHR30413:SF8 1 270 6.7E-57 T 23-04-2016 SHYC_RS08845 cb6b4c470a470e9923259e165a2db188 270 PANTHER PTHR30413 1 270 6.7E-57 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 Gene3D G3DSA:3.50.50.60 5 224 3.4E-36 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 3 620 41.812 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 270 284 - T 23-04-2016 IPR020595 MnmG-related, conserved site SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 SMART SM01228 542 613 5.0E-41 T 23-04-2016 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 PANTHER PTHR11806 1 622 0.0 T 23-04-2016 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 PANTHER PTHR11806:SF0 1 622 0.0 T 23-04-2016 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 5 617 7.2E-287 T 23-04-2016 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 Pfam PF13932 GidA associated domain 399 612 9.4E-73 T 23-04-2016 IPR026904 GidA associated domain 3 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 SUPERFAMILY SSF51905 3 64 2.92E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 SUPERFAMILY SSF51905 95 258 2.92E-46 T 23-04-2016 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 365 388 - T 23-04-2016 IPR020595 MnmG-related, conserved site SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.7E-5 T 23-04-2016 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 158 2.7E-5 T 23-04-2016 SHYC_RS11750 955772ab5f3e3d7d1ec610bf72ac740d 624 Pfam PF01134 Glucose inhibited division protein A 6 395 1.4E-167 T 23-04-2016 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 SHYC_RS11270 80fcfc290ba90f83a840f2d4bdd1bb6d 80 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 6 77 3.1E-9 T 23-04-2016 IPR024962 YukD-like SHYC_RS10340 a1fb407a05ac873bebd101877a81658f 71 Pfam PF11148 Protein of unknown function (DUF2922) 4 70 4.0E-13 T 23-04-2016 IPR021321 Protein of unknown function DUF2922 SHYC_RS00015 8fddbf1f7e76021055754e9a2f995407 232 SUPERFAMILY SSF52833 47 224 4.05E-31 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS00015 8fddbf1f7e76021055754e9a2f995407 232 Pfam PF13462 Thioredoxin 55 224 2.0E-28 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS00015 8fddbf1f7e76021055754e9a2f995407 232 PANTHER PTHR13887:SF14 1 229 3.2E-26 T 23-04-2016 SHYC_RS00015 8fddbf1f7e76021055754e9a2f995407 232 Gene3D G3DSA:3.40.30.10 174 230 3.7E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS00015 8fddbf1f7e76021055754e9a2f995407 232 Gene3D G3DSA:3.40.30.10 55 139 3.7E-33 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS00015 8fddbf1f7e76021055754e9a2f995407 232 PANTHER PTHR13887 1 229 3.2E-26 T 23-04-2016 SHYC_RS09195 1b0901cbcc1f85dfd2ad877f97e42f8a 300 SUPERFAMILY SSF56529 81 298 5.49E-69 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SHYC_RS09195 1b0901cbcc1f85dfd2ad877f97e42f8a 300 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 95 298 1.3E-60 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SHYC_RS09195 1b0901cbcc1f85dfd2ad877f97e42f8a 300 PANTHER PTHR11820 1 300 4.8E-103 T 23-04-2016 SHYC_RS09195 1b0901cbcc1f85dfd2ad877f97e42f8a 300 PANTHER PTHR11820:SF6 1 300 4.8E-103 T 23-04-2016 SHYC_RS09195 1b0901cbcc1f85dfd2ad877f97e42f8a 300 Gene3D G3DSA:3.90.850.10 86 299 7.1E-75 T 23-04-2016 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 SHYC_RS11895 d7c2ca990c2a7637110c6a9530d30dd1 111 SUPERFAMILY SSF48295 1 63 7.32E-20 T 23-04-2016 IPR010921 Trp repressor/replication initiator GO:0043565 SHYC_RS11895 d7c2ca990c2a7637110c6a9530d30dd1 111 Pfam PF13518 Helix-turn-helix domain 10 62 1.7E-17 T 23-04-2016 SHYC_RS11895 d7c2ca990c2a7637110c6a9530d30dd1 111 Gene3D G3DSA:1.10.10.60 9 96 1.3E-13 T 23-04-2016 IPR009057 Homeodomain-like GO:0003677 SHYC_RS10260 43b164d84b8a68515e1789329a9b0a70 264 SMART SM00382 49 228 1.4E-8 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS10260 43b164d84b8a68515e1789329a9b0a70 264 PANTHER PTHR24220:SF117 6 16 1.2E-89 T 23-04-2016 SHYC_RS10260 43b164d84b8a68515e1789329a9b0a70 264 PANTHER PTHR24220:SF117 37 235 1.2E-89 T 23-04-2016 SHYC_RS10260 43b164d84b8a68515e1789329a9b0a70 264 Gene3D G3DSA:3.40.50.300 2 245 5.0E-44 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10260 43b164d84b8a68515e1789329a9b0a70 264 SUPERFAMILY SSF52540 35 234 1.24E-39 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS10260 43b164d84b8a68515e1789329a9b0a70 264 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 23-04-2016 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 SHYC_RS10260 43b164d84b8a68515e1789329a9b0a70 264 PANTHER PTHR24220 6 16 1.2E-89 T 23-04-2016 SHYC_RS10260 43b164d84b8a68515e1789329a9b0a70 264 PANTHER PTHR24220 37 235 1.2E-89 T 23-04-2016 SHYC_RS10260 43b164d84b8a68515e1789329a9b0a70 264 Pfam PF00005 ABC transporter 40 171 2.4E-15 T 23-04-2016 IPR003439 ABC transporter-like GO:0005524|GO:0016887 SHYC_RS02040 8b3df9cba345e9b709d731d9d16bcabc 221 PANTHER PTHR32309 1 221 2.5E-41 T 23-04-2016 SHYC_RS02040 8b3df9cba345e9b709d731d9d16bcabc 221 Pfam PF13807 G-rich domain on putative tyrosine kinase 133 194 8.6E-8 T 23-04-2016 IPR032807 Tyrosine kinase, G-rich domain SHYC_RS02040 8b3df9cba345e9b709d731d9d16bcabc 221 Pfam PF02706 Chain length determinant protein 3 139 7.2E-26 T 23-04-2016 IPR003856 Lipopolysaccharide biosynthesis GO:0009103|GO:0016020 SHYC_RS08645 a49a220f53b3c9f27f0fff55ae8402d4 184 Gene3D G3DSA:3.10.20.120 84 181 9.5E-24 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS08645 a49a220f53b3c9f27f0fff55ae8402d4 184 SUPERFAMILY SSF54334 94 181 1.31E-16 T 23-04-2016 IPR016091 Superantigen toxin, C-terminal GO:0005576|GO:0009405 SHYC_RS10355 ee10129cd1c670bfed95e411e1e072e5 123 SUPERFAMILY SSF46785 7 115 1.84E-21 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS10355 ee10129cd1c670bfed95e411e1e072e5 123 Pfam PF13463 Winged helix DNA-binding domain 33 94 4.4E-5 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS10355 ee10129cd1c670bfed95e411e1e072e5 123 TIGRFAM TIGR01889 Staph_reg_Sar: staphylococcal accessory regulator family 11 116 3.2E-34 T 23-04-2016 IPR010166 Accessory regulator, Staphylococcus GO:0006355 SHYC_RS10355 ee10129cd1c670bfed95e411e1e072e5 123 Gene3D G3DSA:1.10.10.10 1 82 1.2E-31 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS08620 7b97710e3035642d9e2a252ffbc22dd3 209 Gene3D G3DSA:1.20.120.570 11 207 1.3E-42 T 23-04-2016 IPR019454 Putative cell-wall binding lipoprotein YkyA-like SHYC_RS08620 7b97710e3035642d9e2a252ffbc22dd3 209 SUPERFAMILY SSF140423 23 203 4.32E-29 T 23-04-2016 IPR019454 Putative cell-wall binding lipoprotein YkyA-like SHYC_RS08620 7b97710e3035642d9e2a252ffbc22dd3 209 Pfam PF10368 Putative cell-wall binding lipoprotein 12 207 3.2E-42 T 23-04-2016 IPR019454 Putative cell-wall binding lipoprotein YkyA-like SHYC_RS05515 08a6ec8a8a4a496813576959935aab3a 252 Gene3D G3DSA:3.40.50.1820 10 242 8.6E-23 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS05515 08a6ec8a8a4a496813576959935aab3a 252 SUPERFAMILY SSF53474 9 241 1.71E-28 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS05515 08a6ec8a8a4a496813576959935aab3a 252 Pfam PF00326 Prolyl oligopeptidase family 106 242 1.7E-13 T 23-04-2016 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 SHYC_RS08330 6651f4aaf3afc53fbca862242d5a0bc8 434 PANTHER PTHR32024 6 434 5.7E-149 T 23-04-2016 SHYC_RS08330 6651f4aaf3afc53fbca862242d5a0bc8 434 Pfam PF02386 Cation transport protein 25 414 4.4E-58 T 23-04-2016 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 SHYC_RS08330 6651f4aaf3afc53fbca862242d5a0bc8 434 PANTHER PTHR32024:SF1 6 434 5.7E-149 T 23-04-2016 SHYC_RS00395 58a037443f7accb221ad1ba4bdd41ae8 284 Gene3D G3DSA:3.40.1440.10 184 284 1.9E-20 T 23-04-2016 IPR027299 GIY-YIG domain SHYC_RS00395 58a037443f7accb221ad1ba4bdd41ae8 284 SUPERFAMILY SSF82771 185 282 5.1E-13 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily SHYC_RS00395 58a037443f7accb221ad1ba4bdd41ae8 284 Pfam PF01541 GIY-YIG catalytic domain 185 276 6.3E-9 T 23-04-2016 IPR000305 GIY-YIG nuclease superfamily SHYC_RS11095 19d7496d64dafd42067d4e377c758ec4 106 Gene3D G3DSA:3.30.1310.10 2 106 4.4E-39 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHYC_RS11095 19d7496d64dafd42067d4e377c758ec4 106 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 4 105 3.0E-30 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHYC_RS11095 19d7496d64dafd42067d4e377c758ec4 106 Pfam PF02575 YbaB/EbfC DNA-binding family 11 101 7.8E-33 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHYC_RS11095 19d7496d64dafd42067d4e377c758ec4 106 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 99 22.951 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHYC_RS11095 19d7496d64dafd42067d4e377c758ec4 106 PANTHER PTHR33449:SF1 1 106 2.8E-45 T 23-04-2016 SHYC_RS11095 19d7496d64dafd42067d4e377c758ec4 106 PANTHER PTHR33449 1 106 2.8E-45 T 23-04-2016 SHYC_RS11095 19d7496d64dafd42067d4e377c758ec4 106 PIRSF PIRSF004555 3 106 1.1E-38 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHYC_RS11095 19d7496d64dafd42067d4e377c758ec4 106 SUPERFAMILY SSF82607 11 105 6.02E-33 T 23-04-2016 IPR004401 Nucleoid-associated protein YbaB/EbfC family SHYC_RS00565 b78d9a8771dd4beeb24561856849da7e 255 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 4 248 9.1E-88 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS00565 b78d9a8771dd4beeb24561856849da7e 255 Pfam PF04507 Protein of unknown function, DUF576 2 250 7.0E-100 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS10255 9d5700259cc3ae965979a80606adc7c0 267 PANTHER PTHR30413 4 267 8.3E-85 T 23-04-2016 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 SHYC_RS10255 9d5700259cc3ae965979a80606adc7c0 267 Pfam PF01061 ABC-2 type transporter 17 224 5.7E-16 T 23-04-2016 IPR013525 ABC-2 type transporter GO:0016020 SHYC_RS10255 9d5700259cc3ae965979a80606adc7c0 267 PANTHER PTHR30413:SF8 4 267 8.3E-85 T 23-04-2016 SHYC_RS00950 186bf8d3d86f5e4656e5ff494ba8aad2 83 TIGRFAM TIGR01573 cas2: CRISPR-associated endonuclease Cas2 1 83 3.9E-21 T 23-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SHYC_RS00950 186bf8d3d86f5e4656e5ff494ba8aad2 83 Pfam PF09827 CRISPR associated protein Cas2 1 79 3.4E-16 T 23-04-2016 IPR019199 Virulence-associated protein D / CRISPR associated protein Cas2 SHYC_RS00950 186bf8d3d86f5e4656e5ff494ba8aad2 83 Hamap MF_01471 CRISPR-associated endoribonuclease Cas2 [cas2]. 1 83 11.873 T 23-04-2016 IPR021127 CRISPR-associated endonuclease Cas2 GO:0004521|GO:0043571 SHYC_RS00950 186bf8d3d86f5e4656e5ff494ba8aad2 83 SUPERFAMILY SSF143430 1 82 1.57E-13 T 23-04-2016 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 SUPERFAMILY SSF51735 160 403 3.44E-85 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 SMART SM01274 15 148 2.8E-77 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 PANTHER PTHR23406 29 400 2.7E-248 T 23-04-2016 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 Pfam PF03949 Malic enzyme, NAD binding domain 162 383 2.1E-26 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 PANTHER PTHR23406:SF23 29 400 2.7E-248 T 23-04-2016 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 SUPERFAMILY SSF53223 7 158 7.91E-53 T 23-04-2016 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 PIRSF PIRSF000106 26 405 2.0E-86 T 23-04-2016 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471|GO:0006108|GO:0055114 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 Gene3D G3DSA:3.40.50.720 158 402 1.8E-89 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 SMART SM00919 160 384 3.6E-132 T 23-04-2016 IPR012302 Malic enzyme, NAD-binding GO:0004471|GO:0051287|GO:0055114 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 Pfam PF00390 Malic enzyme, N-terminal domain 20 110 6.7E-21 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 Pfam PF00390 Malic enzyme, N-terminal domain 111 148 3.5E-6 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 Gene3D G3DSA:3.40.50.10380 6 157 4.4E-53 T 23-04-2016 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 SHYC_RS05930 71743fee166566c7a5633cd402af4260 409 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 23-04-2016 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 SHYC_RS08705 fac30ab381398e326d9c3a33a593ff8e 263 PANTHER PTHR33514 1 256 1.6E-53 T 23-04-2016 SHYC_RS08705 fac30ab381398e326d9c3a33a593ff8e 263 PANTHER PTHR33514:SF4 1 256 1.6E-53 T 23-04-2016 SHYC_RS08705 fac30ab381398e326d9c3a33a593ff8e 263 Pfam PF02361 Cobalt transport protein 15 218 5.5E-25 T 23-04-2016 IPR003339 ABC/ECF transporter, transmembrane component SHYC_RS08150 892e66b6be85a50a2add41f14a67c715 69 SMART SM01409 8 62 1.1E-12 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS08150 892e66b6be85a50a2add41f14a67c715 69 Pfam PF01192 RNA polymerase Rpb6 9 61 7.0E-13 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS08150 892e66b6be85a50a2add41f14a67c715 69 Gene3D G3DSA:3.90.940.10 1 61 2.2E-17 T 23-04-2016 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS08150 892e66b6be85a50a2add41f14a67c715 69 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 2.3E-14 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS08150 892e66b6be85a50a2add41f14a67c715 69 SUPERFAMILY SSF63562 1 64 4.36E-18 T 23-04-2016 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS08150 892e66b6be85a50a2add41f14a67c715 69 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 63 13.615 T 23-04-2016 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 SHYC_RS09395 1a0e54a3705687add3989b670967575a 89 Pfam PF11256 Protein of unknown function (DUF3055) 6 85 6.6E-31 T 23-04-2016 IPR021415 Protein of unknown function DUF3055 SHYC_RS09100 9cdc1a91f82e731e45c32f44f2124186 602 PANTHER PTHR11804:SF8 144 602 1.4E-132 T 23-04-2016 SHYC_RS09100 9cdc1a91f82e731e45c32f44f2124186 602 Pfam PF08439 Oligopeptidase F 117 186 1.6E-19 T 23-04-2016 IPR013647 Oligopeptidase F, N-terminal domain SHYC_RS09100 9cdc1a91f82e731e45c32f44f2124186 602 Gene3D G3DSA:3.40.390.10 374 427 5.5E-5 T 23-04-2016 IPR024079 Metallopeptidase, catalytic domain GO:0008237 SHYC_RS09100 9cdc1a91f82e731e45c32f44f2124186 602 PANTHER PTHR11804 144 602 1.4E-132 T 23-04-2016 SHYC_RS09100 9cdc1a91f82e731e45c32f44f2124186 602 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 14 598 1.1E-199 T 23-04-2016 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 SHYC_RS09100 9cdc1a91f82e731e45c32f44f2124186 602 Pfam PF01432 Peptidase family M3 207 587 2.8E-76 T 23-04-2016 IPR001567 Peptidase M3A/M3B GO:0004222|GO:0006508 SHYC_RS09100 9cdc1a91f82e731e45c32f44f2124186 602 SUPERFAMILY SSF55486 10 583 6.51E-121 T 23-04-2016 SHYC_RS09100 9cdc1a91f82e731e45c32f44f2124186 602 Gene3D G3DSA:1.10.287.830 185 230 4.8E-22 T 23-04-2016 SHYC_RS06745 0fef071e47975d5c64bbf585b09cf7d4 125 PANTHER PTHR34297 11 114 3.0E-30 T 23-04-2016 SHYC_RS06745 0fef071e47975d5c64bbf585b09cf7d4 125 Pfam PF03780 Asp23 family, cell envelope-related function 12 114 3.7E-29 T 23-04-2016 IPR005531 Alkaline shock protein Asp23 SHYC_RS06745 0fef071e47975d5c64bbf585b09cf7d4 125 PANTHER PTHR34297:SF1 11 114 3.0E-30 T 23-04-2016 SHYC_RS05635 01889d316321a93aad7aa889766bb782 187 Gene3D G3DSA:3.40.50.150 18 167 1.8E-23 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05635 01889d316321a93aad7aa889766bb782 187 Pfam PF06962 Putative rRNA methylase 47 183 1.1E-46 T 23-04-2016 IPR010719 Putative rRNA methylase KEGG: 00253+2.1.1.-|KEGG: 00270+2.1.1.-|KEGG: 00332+2.1.1.-|KEGG: 00340+2.1.1.-|KEGG: 00350+2.1.1.-|KEGG: 00360+2.1.1.-|KEGG: 00380+2.1.1.-|KEGG: 00450+2.1.1.-|KEGG: 00522+2.1.1.-|KEGG: 00523+2.1.1.-|KEGG: 00624+2.1.1.-|KEGG: 00627+2.1.1.-|KEGG: 00860+2.1.1.-|KEGG: 00940+2.1.1.-|KEGG: 00941+2.1.1.-|KEGG: 00942+2.1.1.-|KEGG: 00945+2.1.1.-|KEGG: 00950+2.1.1.-|KEGG: 00981+2.1.1.- SHYC_RS05635 01889d316321a93aad7aa889766bb782 187 PANTHER PTHR35276 4 186 1.3E-33 T 23-04-2016 SHYC_RS05635 01889d316321a93aad7aa889766bb782 187 SUPERFAMILY SSF53335 8 165 2.97E-26 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05635 01889d316321a93aad7aa889766bb782 187 PANTHER PTHR35276:SF1 4 186 1.3E-33 T 23-04-2016 SHYC_RS00210 f36111eb37324a1f46540194934e1356 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 2.0E-58 T 23-04-2016 IPR016051 Ribosomal RNA large subunit methyltransferase H GO:0005737|GO:0008168|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS00210 f36111eb37324a1f46540194934e1356 159 Gene3D G3DSA:3.40.1280.10 1 159 3.4E-65 T 23-04-2016 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal SHYC_RS00210 f36111eb37324a1f46540194934e1356 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 1.8E-61 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS00210 f36111eb37324a1f46540194934e1356 159 SUPERFAMILY SSF75217 1 157 1.31E-58 T 23-04-2016 IPR029028 Alpha/beta knot methyltransferases SHYC_RS00210 f36111eb37324a1f46540194934e1356 159 PIRSF PIRSF004505 1 159 5.6E-54 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS00210 f36111eb37324a1f46540194934e1356 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.518 T 23-04-2016 IPR003742 SPOUT methyltransferase, predicted GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 SHYC_RS06800 0f94642d73e0128d04108efe25e02632 332 PANTHER PTHR11516 8 327 8.4E-153 T 23-04-2016 SHYC_RS06800 0f94642d73e0128d04108efe25e02632 332 SUPERFAMILY SSF52518 6 326 9.22E-89 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS06800 0f94642d73e0128d04108efe25e02632 332 PANTHER PTHR11516:SF39 8 327 8.4E-153 T 23-04-2016 SHYC_RS06800 0f94642d73e0128d04108efe25e02632 332 Pfam PF00676 Dehydrogenase E1 component 20 316 1.9E-82 T 23-04-2016 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 SHYC_RS06800 0f94642d73e0128d04108efe25e02632 332 Gene3D G3DSA:3.40.50.970 5 327 6.8E-116 T 23-04-2016 IPR029061 Thiamin diphosphate-binding fold SHYC_RS01340 7959986ceea02e9bbdd7d240bd95213b 252 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 243 8.7E-57 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS01340 7959986ceea02e9bbdd7d240bd95213b 252 Pfam PF04507 Protein of unknown function, DUF576 1 246 5.3E-63 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS06930 b0db9a419738b520015d77b7f2562b3c 543 SMART SM00257 495 543 0.0015 T 23-04-2016 IPR018392 LysM domain SHYC_RS06930 b0db9a419738b520015d77b7f2562b3c 543 Pfam PF01476 LysM domain 496 543 4.4E-5 T 23-04-2016 IPR018392 LysM domain SHYC_RS06930 b0db9a419738b520015d77b7f2562b3c 543 Gene3D G3DSA:3.10.350.10 495 543 7.8E-7 T 23-04-2016 IPR018392 LysM domain SHYC_RS06930 b0db9a419738b520015d77b7f2562b3c 543 SUPERFAMILY SSF54106 495 543 1.96E-5 T 23-04-2016 IPR018392 LysM domain SHYC_RS05465 1dfe3830a575ce6c2eb16705b34fb25b 287 Pfam PF13367 Protease prsW family 80 257 9.0E-17 T 23-04-2016 IPR026898 Protease PrsW GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SHYC_RS01515 4281e15c8fb413dd249906c763926b9d 143 SUPERFAMILY SSF54909 43 119 9.49E-15 T 23-04-2016 IPR011008 Dimeric alpha-beta barrel SHYC_RS01515 4281e15c8fb413dd249906c763926b9d 143 Gene3D G3DSA:3.30.70.900 42 115 2.6E-15 T 23-04-2016 SHYC_RS01515 4281e15c8fb413dd249906c763926b9d 143 PANTHER PTHR34474 12 119 2.9E-15 T 23-04-2016 SHYC_RS01515 4281e15c8fb413dd249906c763926b9d 143 PANTHER PTHR34474:SF3 12 119 2.9E-15 T 23-04-2016 SHYC_RS01515 4281e15c8fb413dd249906c763926b9d 143 Pfam PF03992 Antibiotic biosynthesis monooxygenase 43 116 1.9E-11 T 23-04-2016 IPR007138 Antibiotic biosynthesis monooxygenase domain SHYC_RS04095 c189cf1b95a11eb2ae9a82fafe1db7f4 183 Pfam PF14595 Thioredoxin 14 138 3.4E-37 T 23-04-2016 SHYC_RS04095 c189cf1b95a11eb2ae9a82fafe1db7f4 183 Gene3D G3DSA:3.40.30.10 3 183 1.2E-29 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS04095 c189cf1b95a11eb2ae9a82fafe1db7f4 183 SUPERFAMILY SSF52833 32 143 1.98E-8 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS06005 99c14e3c51089e7a0d9c8f5c717c1519 307 PANTHER PTHR30050:SF8 26 307 9.7E-110 T 23-04-2016 SHYC_RS06005 99c14e3c51089e7a0d9c8f5c717c1519 307 Gene3D G3DSA:3.40.50.300 108 297 1.8E-38 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06005 99c14e3c51089e7a0d9c8f5c717c1519 307 Pfam PF07319 Primosomal protein DnaI N-terminus 1 95 1.3E-26 T 23-04-2016 IPR009928 Primosomal DnaI, N-terminal SHYC_RS06005 99c14e3c51089e7a0d9c8f5c717c1519 307 PANTHER PTHR30050 26 307 9.7E-110 T 23-04-2016 SHYC_RS06005 99c14e3c51089e7a0d9c8f5c717c1519 307 SUPERFAMILY SSF52540 124 271 5.17E-19 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06005 99c14e3c51089e7a0d9c8f5c717c1519 307 Pfam PF01695 IstB-like ATP binding protein 158 269 3.2E-8 T 23-04-2016 IPR002611 IstB-like ATP-binding protein GO:0005524 SHYC_RS09755 326d235104dfd4c2a6c86f231c03dff1 106 Gene3D G3DSA:2.40.310.10 1 105 6.3E-28 T 23-04-2016 IPR014728 Staphostatin A/B GO:0004869|GO:0005737 SHYC_RS09755 326d235104dfd4c2a6c86f231c03dff1 106 Pfam PF09022 Staphostatin A 1 105 3.5E-26 T 23-04-2016 IPR015112 Staphostatin A SHYC_RS09755 326d235104dfd4c2a6c86f231c03dff1 106 SUPERFAMILY SSF50882 1 105 2.14E-26 T 23-04-2016 IPR016085 Protease inhibitor, beta-barrel domain GO:0004866 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 PRINTS PR00758 Arsenical pump membrane protein signature 178 201 7.2E-103 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 PRINTS PR00758 Arsenical pump membrane protein signature 145 169 7.2E-103 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 PRINTS PR00758 Arsenical pump membrane protein signature 398 422 7.2E-103 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 PRINTS PR00758 Arsenical pump membrane protein signature 324 346 7.2E-103 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 PRINTS PR00758 Arsenical pump membrane protein signature 279 303 7.2E-103 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 PRINTS PR00758 Arsenical pump membrane protein signature 218 243 7.2E-103 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 PRINTS PR00758 Arsenical pump membrane protein signature 365 390 7.2E-103 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 PRINTS PR00758 Arsenical pump membrane protein signature 102 126 7.2E-103 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 Pfam PF02040 Arsenical pump membrane protein 4 425 1.1E-189 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 PANTHER PTHR10283 2 428 7.2E-144 T 23-04-2016 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 428 7.7E-215 T 23-04-2016 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 SHYC_RS00200 86c64fdfea2a834acccec9ca62e20929 429 PANTHER PTHR10283:SF21 2 428 7.2E-144 T 23-04-2016 SHYC_RS03715 b26c28ece1ee814c2413ae6be014a746 110 Gene3D G3DSA:2.40.50.140 3 106 1.3E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03715 b26c28ece1ee814c2413ae6be014a746 110 Pfam PF00436 Single-strand binding protein family 4 102 3.4E-14 T 23-04-2016 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 SHYC_RS03715 b26c28ece1ee814c2413ae6be014a746 110 SUPERFAMILY SSF50249 4 105 6.85E-16 T 23-04-2016 IPR012340 Nucleic acid-binding, OB-fold SHYC_RS03715 b26c28ece1ee814c2413ae6be014a746 110 PIRSF PIRSF002070 2 108 5.9E-17 T 23-04-2016 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 SHYC_RS02345 b8ffa755fd3841fe935e69d1615993f6 272 PANTHER PTHR30520 3 269 3.6E-99 T 23-04-2016 SHYC_RS02345 b8ffa755fd3841fe935e69d1615993f6 272 Gene3D G3DSA:1.20.1080.10 39 267 1.4E-53 T 23-04-2016 IPR023271 Aquaporin-like SHYC_RS02345 b8ffa755fd3841fe935e69d1615993f6 272 Pfam PF01226 Formate/nitrite transporter 20 264 7.0E-48 T 23-04-2016 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 SHYC_RS02345 b8ffa755fd3841fe935e69d1615993f6 272 PANTHER PTHR30520:SF5 3 269 3.6E-99 T 23-04-2016 SHYC_RS04180 2c56c453c86b2a8595a6e15adf53629c 60 Pfam PF14044 NETI protein 2 54 1.8E-24 T 23-04-2016 IPR025930 NETI protein SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 PANTHER PTHR11958 1 422 3.0E-145 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.3E-51 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 PRINTS PR00173 Glutamate-aspartate symporter signature 370 390 1.3E-51 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 PRINTS PR00173 Glutamate-aspartate symporter signature 308 334 1.3E-51 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 PRINTS PR00173 Glutamate-aspartate symporter signature 207 226 1.3E-51 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.3E-51 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 PRINTS PR00173 Glutamate-aspartate symporter signature 159 181 1.3E-51 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 PRINTS PR00173 Glutamate-aspartate symporter signature 343 362 1.3E-51 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.3E-51 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 Gene3D G3DSA:1.10.3860.10 2 420 5.0E-126 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 Pfam PF00375 Sodium:dicarboxylate symporter family 6 414 5.2E-125 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS04685 a61d53d93b046cdfb3aa223f31bb3b02 428 SUPERFAMILY SSF118215 6 415 4.58E-113 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS09005 0172cd26805f4c47b2e90b5f831fbbbf 79 Pfam PF14166 YueH-like protein 2 78 2.2E-26 T 23-04-2016 IPR020260 Uncharacterised protein family YueH SHYC_RS09005 0172cd26805f4c47b2e90b5f831fbbbf 79 ProDom PD060056 YUEH 1 79 1.0E-5 T 23-04-2016 IPR020260 Uncharacterised protein family YueH SHYC_RS08730 827d3927df18009314664133e74acda8 473 Gene3D G3DSA:3.40.50.2020 267 433 8.5E-43 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS08730 827d3927df18009314664133e74acda8 473 SUPERFAMILY SSF56235 11 230 3.52E-62 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHYC_RS08730 827d3927df18009314664133e74acda8 473 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 10 455 44.122 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SHYC_RS08730 827d3927df18009314664133e74acda8 473 Pfam PF00156 Phosphoribosyl transferase domain 271 382 8.8E-8 T 23-04-2016 IPR000836 Phosphoribosyltransferase domain GO:0009116 SHYC_RS08730 827d3927df18009314664133e74acda8 473 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 11 454 2.0E-149 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SHYC_RS08730 827d3927df18009314664133e74acda8 473 SUPERFAMILY SSF53271 247 462 1.14E-66 T 23-04-2016 IPR029057 Phosphoribosyltransferase-like SHYC_RS08730 827d3927df18009314664133e74acda8 473 Gene3D G3DSA:3.60.20.10 11 254 1.9E-61 T 23-04-2016 IPR029055 Nucleophile aminohydrolases, N-terminal SHYC_RS08730 827d3927df18009314664133e74acda8 473 PANTHER PTHR11907:SF0 8 467 4.5E-215 T 23-04-2016 SHYC_RS08730 827d3927df18009314664133e74acda8 473 PIRSF PIRSF000485 7 470 1.1E-167 T 23-04-2016 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|UniPathway: UPA00074 SHYC_RS08730 827d3927df18009314664133e74acda8 473 PANTHER PTHR11907 8 467 4.5E-215 T 23-04-2016 SHYC_RS08730 827d3927df18009314664133e74acda8 473 Pfam PF13537 Glutamine amidotransferase domain 92 209 3.1E-20 T 23-04-2016 IPR017932 Glutamine amidotransferase type 2 domain SHYC_RS06390 a0e8e79403261500e2413e4b6dacbc1c 240 Pfam PF13649 Methyltransferase domain 39 129 1.1E-15 T 23-04-2016 SHYC_RS06390 a0e8e79403261500e2413e4b6dacbc1c 240 Gene3D G3DSA:3.40.50.150 193 221 1.3E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS06390 a0e8e79403261500e2413e4b6dacbc1c 240 Gene3D G3DSA:3.40.50.150 2 156 1.3E-37 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS06390 a0e8e79403261500e2413e4b6dacbc1c 240 SUPERFAMILY SSF53335 3 240 2.74E-46 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS06390 a0e8e79403261500e2413e4b6dacbc1c 240 PANTHER PTHR10108:SF872 1 161 1.7E-50 T 23-04-2016 SHYC_RS06390 a0e8e79403261500e2413e4b6dacbc1c 240 PANTHER PTHR10108:SF872 187 238 1.7E-50 T 23-04-2016 SHYC_RS06390 a0e8e79403261500e2413e4b6dacbc1c 240 PANTHER PTHR10108 1 161 1.7E-50 T 23-04-2016 SHYC_RS06390 a0e8e79403261500e2413e4b6dacbc1c 240 PANTHER PTHR10108 187 238 1.7E-50 T 23-04-2016 SHYC_RS01735 dcb8dcad95f16fe683bf05a94a1b1f97 439 PANTHER PTHR33308 132 423 4.4E-35 T 23-04-2016 SHYC_RS01735 dcb8dcad95f16fe683bf05a94a1b1f97 439 PANTHER PTHR33308:SF3 132 423 4.4E-35 T 23-04-2016 SHYC_RS01735 dcb8dcad95f16fe683bf05a94a1b1f97 439 SUPERFAMILY SSF54001 324 416 2.16E-18 T 23-04-2016 SHYC_RS01735 dcb8dcad95f16fe683bf05a94a1b1f97 439 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 147 285 2.0E-20 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHYC_RS01735 dcb8dcad95f16fe683bf05a94a1b1f97 439 SMART SM00047 129 290 2.4E-44 T 23-04-2016 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 SHYC_RS01735 dcb8dcad95f16fe683bf05a94a1b1f97 439 Pfam PF05257 CHAP domain 324 411 8.0E-16 T 23-04-2016 IPR007921 CHAP domain SHYC_RS03640 da1636f20abda83bb564465909f50877 379 Gene3D G3DSA:3.40.50.2000 203 364 1.2E-62 T 23-04-2016 SHYC_RS03640 da1636f20abda83bb564465909f50877 379 Gene3D G3DSA:3.40.50.2000 1 202 2.9E-85 T 23-04-2016 SHYC_RS03640 da1636f20abda83bb564465909f50877 379 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 23 361 4.4E-121 T 23-04-2016 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain SHYC_RS03640 da1636f20abda83bb564465909f50877 379 PANTHER PTHR18964 1 366 3.5E-197 T 23-04-2016 SHYC_RS03640 da1636f20abda83bb564465909f50877 379 PANTHER PTHR18964:SF126 1 366 3.5E-197 T 23-04-2016 SHYC_RS03640 da1636f20abda83bb564465909f50877 379 SUPERFAMILY SSF53756 1 369 1.2E-135 T 23-04-2016 SHYC_RS03640 da1636f20abda83bb564465909f50877 379 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 3 364 1.9E-161 T 23-04-2016 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335 SHYC_RS10485 d1dde5fff3fdde502ca0d21952b98ffb 120 PANTHER PTHR10584:SF191 4 70 1.3E-14 T 23-04-2016 SHYC_RS10485 d1dde5fff3fdde502ca0d21952b98ffb 120 PANTHER PTHR10584 4 70 1.3E-14 T 23-04-2016 SHYC_RS10485 d1dde5fff3fdde502ca0d21952b98ffb 120 Pfam PF04241 Protein of unknown function (DUF423) 18 103 1.6E-28 T 23-04-2016 IPR006696 Protein of unknown function DUF423 SHYC_RS05720 72f08c68a3c1328ea014c3436c444683 102 SUPERFAMILY SSF52833 11 99 1.02E-24 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS05720 72f08c68a3c1328ea014c3436c444683 102 Gene3D G3DSA:3.40.30.10 4 98 4.1E-22 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS05720 72f08c68a3c1328ea014c3436c444683 102 Pfam PF00085 Thioredoxin 12 93 2.2E-17 T 23-04-2016 IPR013766 Thioredoxin domain GO:0045454 SHYC_RS05720 72f08c68a3c1328ea014c3436c444683 102 PANTHER PTHR10438 1 102 3.6E-42 T 23-04-2016 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 SHYC_RS05720 72f08c68a3c1328ea014c3436c444683 102 PANTHER PTHR10438:SF301 1 102 3.6E-42 T 23-04-2016 SHYC_RS10650 175705a492c4a2f58598f33db1ce0c3a 84 SUPERFAMILY SSF55315 11 83 6.33E-15 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like SHYC_RS10650 175705a492c4a2f58598f33db1ce0c3a 84 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 8 81 1.1E-10 T 23-04-2016 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 SHYC_RS10650 175705a492c4a2f58598f33db1ce0c3a 84 Gene3D G3DSA:3.30.1330.30 10 83 4.7E-11 T 23-04-2016 IPR029064 50S ribosomal protein L30e-like SHYC_RS05610 156290a61e6f21e1405cfb36c56d6449 346 SUPERFAMILY SSF51730 36 301 1.02E-62 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like SHYC_RS05610 156290a61e6f21e1405cfb36c56d6449 346 Pfam PF01619 Proline dehydrogenase 44 290 2.1E-27 T 23-04-2016 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 SHYC_RS05610 156290a61e6f21e1405cfb36c56d6449 346 PIRSF PIRSF000196 1 305 3.8E-117 T 23-04-2016 IPR008219 Proline dehydrogenase GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|UniPathway: UPA00261 SHYC_RS05610 156290a61e6f21e1405cfb36c56d6449 346 Gene3D G3DSA:3.20.20.220 35 298 1.6E-55 T 23-04-2016 IPR029041 FAD-linked oxidoreductase-like SHYC_RS10420 f4a4430657f9accc086f3514739aabfb 113 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 13 74 7.0E-4 T 23-04-2016 SHYC_RS10420 f4a4430657f9accc086f3514739aabfb 113 Pfam PF07293 Protein of unknown function (DUF1450) 7 73 4.6E-9 T 23-04-2016 IPR009910 Protein of unknown function DUF1450 SHYC_RS10420 f4a4430657f9accc086f3514739aabfb 113 Hamap MF_01863 UPF0741 protein . 1 74 30.469 T 23-04-2016 IPR020880 Protein of unknown function UPF0741 SHYC_RS10270 4a9a39e14cea21d3846dd073fdd11dfd 248 Pfam PF13398 Peptidase M50B-like 21 239 5.5E-34 T 23-04-2016 SHYC_RS02115 daa5ff0c316340996748931042257682 127 Gene3D G3DSA:3.90.79.10 5 122 3.5E-17 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHYC_RS02115 daa5ff0c316340996748931042257682 127 SUPERFAMILY SSF55811 4 124 8.26E-18 T 23-04-2016 IPR015797 NUDIX hydrolase domain-like GO:0016787 SHYC_RS02115 daa5ff0c316340996748931042257682 127 Pfam PF00293 NUDIX domain 7 112 2.3E-12 T 23-04-2016 IPR000086 NUDIX hydrolase domain GO:0016787 SHYC_RS02775 6aafa856bce133c30a3c2057dcd06117 243 PANTHER PTHR36435:SF1 1 243 7.0E-20 T 23-04-2016 SHYC_RS02775 6aafa856bce133c30a3c2057dcd06117 243 Pfam PF02517 CAAX protease self-immunity 143 235 1.2E-13 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SHYC_RS02775 6aafa856bce133c30a3c2057dcd06117 243 PANTHER PTHR36435 1 243 7.0E-20 T 23-04-2016 SHYC_RS01085 2e368a9f88b0ac58125b24f35c229d05 446 TIGRFAM TIGR02919 TIGR02919: accessory Sec system glycosyltransferase GtfB 1 440 6.1E-165 T 23-04-2016 IPR014268 Glycosyltransferase-stabilising protein Gtf2 GO:0031647 SHYC_RS01085 2e368a9f88b0ac58125b24f35c229d05 446 Hamap MF_01473 Glycosyltransferase stabilizing protein Gtf2 [gtf2]. 1 442 34.077 T 23-04-2016 IPR014268 Glycosyltransferase-stabilising protein Gtf2 GO:0031647 SHYC_RS02090 6aa62450d33a09dc75a9ee4f1474666a 403 PANTHER PTHR12526 1 402 2.7E-26 T 23-04-2016 SHYC_RS02090 6aa62450d33a09dc75a9ee4f1474666a 403 PANTHER PTHR12526:SF320 1 402 2.7E-26 T 23-04-2016 SHYC_RS02090 6aa62450d33a09dc75a9ee4f1474666a 403 Pfam PF00534 Glycosyl transferases group 1 211 374 2.5E-11 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 SHYC_RS02090 6aa62450d33a09dc75a9ee4f1474666a 403 SUPERFAMILY SSF53756 21 396 7.53E-30 T 23-04-2016 SHYC_RS00890 7350cd42b0aa7a41da8729e5517f45dc 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 141 2.4E-4 T 23-04-2016 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain SHYC_RS00890 7350cd42b0aa7a41da8729e5517f45dc 144 Gene3D G3DSA:3.10.180.10 11 142 2.3E-26 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS00890 7350cd42b0aa7a41da8729e5517f45dc 144 PANTHER PTHR33990 1 142 1.0E-17 T 23-04-2016 SHYC_RS00890 7350cd42b0aa7a41da8729e5517f45dc 144 SUPERFAMILY SSF54593 4 143 1.31E-22 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS03805 005192237361dd6167936c783229a7fe 496 PANTHER PTHR34473:SF1 1 468 7.1E-86 T 23-04-2016 SHYC_RS03805 005192237361dd6167936c783229a7fe 496 Pfam PF03703 Bacterial PH domain 68 142 8.5E-12 T 23-04-2016 IPR005182 Domain of unknown function DUF304 SHYC_RS03805 005192237361dd6167936c783229a7fe 496 Pfam PF03703 Bacterial PH domain 254 324 3.0E-6 T 23-04-2016 IPR005182 Domain of unknown function DUF304 SHYC_RS03805 005192237361dd6167936c783229a7fe 496 PIRSF PIRSF026631 1 495 6.2E-87 T 23-04-2016 IPR014529 Uncharacterised conserved protein UCP026631 SHYC_RS03805 005192237361dd6167936c783229a7fe 496 PANTHER PTHR34473 1 468 7.1E-86 T 23-04-2016 SHYC_RS00340 118e78e488340512e5361078ba955b4b 233 PANTHER PTHR26402 3 224 4.2E-72 T 23-04-2016 SHYC_RS00340 118e78e488340512e5361078ba955b4b 233 PANTHER PTHR26402:SF578 3 224 4.2E-72 T 23-04-2016 SHYC_RS00340 118e78e488340512e5361078ba955b4b 233 Pfam PF00072 Response regulator receiver domain 6 114 7.9E-28 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS00340 118e78e488340512e5361078ba955b4b 233 SMART SM00862 148 224 6.3E-17 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS00340 118e78e488340512e5361078ba955b4b 233 Gene3D G3DSA:3.40.50.2300 4 121 4.4E-37 T 23-04-2016 SHYC_RS00340 118e78e488340512e5361078ba955b4b 233 SMART SM00448 3 113 2.0E-38 T 23-04-2016 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 Reactome: REACT_14797 SHYC_RS00340 118e78e488340512e5361078ba955b4b 233 SUPERFAMILY SSF52172 4 181 2.7E-38 T 23-04-2016 IPR011006 CheY-like superfamily SHYC_RS00340 118e78e488340512e5361078ba955b4b 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 2.4E-20 T 23-04-2016 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 SHYC_RS00340 118e78e488340512e5361078ba955b4b 233 Gene3D G3DSA:1.10.10.10 126 226 9.2E-27 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS00910 3f8dcbcfc3117c6fc9b58d8f1cbf0ccd 653 Pfam PF02687 FtsX-like permease family 61 183 5.0E-12 T 23-04-2016 IPR003838 ABC transporter permease protein domain GO:0016020 SHYC_RS00910 3f8dcbcfc3117c6fc9b58d8f1cbf0ccd 653 PANTHER PTHR30489 469 645 2.7E-26 T 23-04-2016 SHYC_RS00910 3f8dcbcfc3117c6fc9b58d8f1cbf0ccd 653 PANTHER PTHR30489 1 451 2.7E-26 T 23-04-2016 SHYC_RS00910 3f8dcbcfc3117c6fc9b58d8f1cbf0ccd 653 PIRSF PIRSF018968 1 653 1.0E-55 T 23-04-2016 IPR027022 ABC transporter permease protein, BceB-type GO:0006810 SHYC_RS09510 de441df6c0dfce0d65caa760d5b36530 171 SUPERFAMILY SSF55729 2 163 1.37E-27 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS09510 de441df6c0dfce0d65caa760d5b36530 171 Pfam PF13420 Acetyltransferase (GNAT) domain 37 161 5.5E-23 T 23-04-2016 SHYC_RS09510 de441df6c0dfce0d65caa760d5b36530 171 PANTHER PTHR23091:SF251 1 171 2.1E-16 T 23-04-2016 SHYC_RS09510 de441df6c0dfce0d65caa760d5b36530 171 Gene3D G3DSA:3.40.630.30 3 167 2.4E-35 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS09510 de441df6c0dfce0d65caa760d5b36530 171 PANTHER PTHR23091 1 171 2.1E-16 T 23-04-2016 SHYC_RS07015 51acbe10e7b5dcb1cf6f3baa9c56336d 200 Pfam PF07187 Protein of unknown function (DUF1405) 27 184 1.3E-49 T 23-04-2016 IPR009845 Protein of unknown function DUF1405 SHYC_RS07015 51acbe10e7b5dcb1cf6f3baa9c56336d 200 PANTHER PTHR40042 1 198 4.1E-52 T 23-04-2016 SHYC_RS07100 b8584a6cfe8ac10f0c2c595f5aa65f24 303 PANTHER PTHR22911 1 296 1.0E-118 T 23-04-2016 SHYC_RS07100 b8584a6cfe8ac10f0c2c595f5aa65f24 303 PANTHER PTHR22911:SF41 1 296 1.0E-118 T 23-04-2016 SHYC_RS07100 b8584a6cfe8ac10f0c2c595f5aa65f24 303 Pfam PF00892 EamA-like transporter family 8 148 1.8E-12 T 23-04-2016 IPR000620 EamA domain GO:0016020|GO:0016021 SHYC_RS07100 b8584a6cfe8ac10f0c2c595f5aa65f24 303 SUPERFAMILY SSF103481 198 288 1.22E-6 T 23-04-2016 SHYC_RS07100 b8584a6cfe8ac10f0c2c595f5aa65f24 303 TIGRFAM TIGR00688 rarD: protein RarD 7 262 3.0E-62 T 23-04-2016 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 SHYC_RS07100 b8584a6cfe8ac10f0c2c595f5aa65f24 303 SUPERFAMILY SSF103481 41 149 3.01E-13 T 23-04-2016 SHYC_RS00305 abfe86ef705dc051f45514b907fdd5bb 347 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 5 111 3.4E-13 T 23-04-2016 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 SHYC_RS00305 abfe86ef705dc051f45514b907fdd5bb 347 Gene3D G3DSA:3.40.50.720 3 157 1.3E-11 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS00305 abfe86ef705dc051f45514b907fdd5bb 347 SUPERFAMILY SSF51735 3 93 2.16E-14 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS01265 f49a5f0adac80b18fe03d51507e818ff 449 Pfam PF03611 PTS system sugar-specific permease component 10 406 3.4E-145 T 23-04-2016 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 SHYC_RS01265 f49a5f0adac80b18fe03d51507e818ff 449 PANTHER PTHR33843:SF4 1 446 1.6E-243 T 23-04-2016 SHYC_RS01265 f49a5f0adac80b18fe03d51507e818ff 449 PANTHER PTHR33843 1 446 1.6E-243 T 23-04-2016 SHYC_RS01800 5b2c3be956b710c3d7e5ac97ca48481b 161 Pfam PF07853 Protein of unknown function (DUF1648) 17 62 9.4E-12 T 23-04-2016 IPR012867 Domain of unknown function DUF1648 SHYC_RS09425 070639030ed58ebbfb2944728e261cc2 331 Pfam PF01595 Domain of unknown function DUF21 3 175 4.3E-44 T 23-04-2016 IPR002550 Domain of unknown function DUF21 SHYC_RS09425 070639030ed58ebbfb2944728e261cc2 331 SUPERFAMILY SSF54631 180 312 1.64E-22 T 23-04-2016 SHYC_RS09425 070639030ed58ebbfb2944728e261cc2 331 Gene3D G3DSA:3.10.580.10 179 316 1.9E-12 T 23-04-2016 SHYC_RS09425 070639030ed58ebbfb2944728e261cc2 331 PANTHER PTHR22777 1 330 7.4E-98 T 23-04-2016 SHYC_RS01325 3e89e6301ce5b33f3b141137539ffe20 252 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 232 3.4E-59 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS01325 3e89e6301ce5b33f3b141137539ffe20 252 Pfam PF04507 Protein of unknown function, DUF576 1 245 8.7E-66 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS11585 91f5d20c48d12aa0dcc7e61bc6c02319 233 Pfam PF02517 CAAX protease self-immunity 137 224 7.1E-13 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SHYC_RS03530 7e9bab9dd4d7013fa3d66c51aad7b5ea 223 Pfam PF11042 Protein of unknown function (DUF2750) 6 99 5.7E-8 T 23-04-2016 IPR021284 Protein of unknown function DUF2750 SHYC_RS03530 7e9bab9dd4d7013fa3d66c51aad7b5ea 223 Pfam PF11042 Protein of unknown function (DUF2750) 116 221 4.0E-21 T 23-04-2016 IPR021284 Protein of unknown function DUF2750 SHYC_RS00115 d858586cb89742d1c1800478cc7db5fc 230 Pfam PF03591 AzlC protein 15 154 1.2E-36 T 23-04-2016 IPR011606 Branched-chain amino acid transport, permease SHYC_RS00115 d858586cb89742d1c1800478cc7db5fc 230 PANTHER PTHR34979 1 230 4.9E-52 T 23-04-2016 SHYC_RS02175 ccd66f9b1d86502345694ab62a69df0e 142 Gene3D G3DSA:3.30.479.10 42 136 1.3E-16 T 23-04-2016 SHYC_RS02175 ccd66f9b1d86502345694ab62a69df0e 142 SUPERFAMILY SSF55620 34 137 1.0E-16 T 23-04-2016 SHYC_RS02175 ccd66f9b1d86502345694ab62a69df0e 142 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 47 136 1.6E-13 T 23-04-2016 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein SHYC_RS11805 849ad5c577baa43179598e53c15abbdd 103 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 62 93 1.1E-5 T 23-04-2016 IPR019931 LPXTG cell wall anchor domain SHYC_RS11805 849ad5c577baa43179598e53c15abbdd 103 Pfam PF00746 Gram positive anchor 55 90 4.9E-8 T 23-04-2016 IPR019948 Gram-positive anchor SHYC_RS10950 bc6a103f3abd96a50191f2797425cf64 509 PANTHER PTHR30250:SF4 1 505 2.7E-142 T 23-04-2016 SHYC_RS10950 bc6a103f3abd96a50191f2797425cf64 509 Pfam PF01943 Polysaccharide biosynthesis protein 8 292 4.7E-24 T 23-04-2016 IPR002797 Polysaccharide biosynthesis protein GO:0016020 SHYC_RS10950 bc6a103f3abd96a50191f2797425cf64 509 PANTHER PTHR30250 1 505 2.7E-142 T 23-04-2016 SHYC_RS10950 bc6a103f3abd96a50191f2797425cf64 509 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 343 484 6.5E-21 T 23-04-2016 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain SHYC_RS08795 ba5640190837ee146d0d3f0fd9f90417 96 PANTHER PTHR36835 4 96 7.8E-34 T 23-04-2016 SHYC_RS08795 ba5640190837ee146d0d3f0fd9f90417 96 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 8 81 2.3E-12 T 23-04-2016 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 SHYC_RS08795 ba5640190837ee146d0d3f0fd9f90417 96 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 5 91 5.9E-30 T 23-04-2016 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 KEGG: 00965+1.10.3.- SHYC_RS05215 1fd73ea67ca771cedcbeb2eca20db430 169 Pfam PF05565 Siphovirus Gp157 5 169 8.2E-33 T 23-04-2016 IPR008840 Siphovirus Gp157 SHYC_RS11530 1fb1966673a6f7135b49ae9cdfa32f98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.8E-19 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS11530 1fb1966673a6f7135b49ae9cdfa32f98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.8E-19 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS11530 1fb1966673a6f7135b49ae9cdfa32f98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 76 96 1.8E-19 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS11530 1fb1966673a6f7135b49ae9cdfa32f98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 233 252 1.8E-19 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS11530 1fb1966673a6f7135b49ae9cdfa32f98 463 PRINTS PR00173 Glutamate-aspartate symporter signature 106 131 1.8E-19 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS11530 1fb1966673a6f7135b49ae9cdfa32f98 463 PANTHER PTHR11958:SF5 1 454 1.4E-225 T 23-04-2016 SHYC_RS11530 1fb1966673a6f7135b49ae9cdfa32f98 463 PANTHER PTHR11958 1 454 1.4E-225 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS11530 1fb1966673a6f7135b49ae9cdfa32f98 463 Pfam PF00375 Sodium:dicarboxylate symporter family 32 441 4.9E-95 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS11530 1fb1966673a6f7135b49ae9cdfa32f98 463 Gene3D G3DSA:1.10.3860.10 21 448 9.0E-93 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS11530 1fb1966673a6f7135b49ae9cdfa32f98 463 SUPERFAMILY SSF118215 31 441 1.1E-86 T 23-04-2016 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 Reactome: REACT_15518|Reactome: REACT_19419 SHYC_RS02100 afeacf747677c3848ff51d8329aee8ad 205 Gene3D G3DSA:3.40.50.20 1 71 1.4E-14 T 23-04-2016 IPR016185 Pre-ATP-grasp domain SHYC_RS02100 afeacf747677c3848ff51d8329aee8ad 205 Gene3D G3DSA:2.160.10.10 72 204 1.9E-31 T 23-04-2016 SHYC_RS02100 afeacf747677c3848ff51d8329aee8ad 205 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 162 190 - T 23-04-2016 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: REACT_17015 SHYC_RS02100 afeacf747677c3848ff51d8329aee8ad 205 SUPERFAMILY SSF51161 1 203 2.91E-45 T 23-04-2016 IPR011004 Trimeric LpxA-like SHYC_RS02100 afeacf747677c3848ff51d8329aee8ad 205 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 202 9.6E-62 T 23-04-2016 IPR020019 Sialic acid O-acyltransferase NeuD-like SHYC_RS02100 afeacf747677c3848ff51d8329aee8ad 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 154 186 7.4E-4 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS02100 afeacf747677c3848ff51d8329aee8ad 205 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 99 133 7.0E-6 T 23-04-2016 IPR001451 Hexapeptide repeat SHYC_RS02100 afeacf747677c3848ff51d8329aee8ad 205 PANTHER PTHR23416 90 203 5.4E-26 T 23-04-2016 SHYC_RS03305 b9390b9ae7739e8837a4026bc090c545 383 PANTHER PTHR23501 4 376 6.4E-94 T 23-04-2016 SHYC_RS03305 b9390b9ae7739e8837a4026bc090c545 383 SUPERFAMILY SSF103473 6 378 3.4E-56 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS03305 b9390b9ae7739e8837a4026bc090c545 383 Gene3D G3DSA:1.20.1250.20 200 380 6.9E-15 T 23-04-2016 SHYC_RS03305 b9390b9ae7739e8837a4026bc090c545 383 Gene3D G3DSA:1.20.1250.20 6 192 1.2E-28 T 23-04-2016 SHYC_RS03305 b9390b9ae7739e8837a4026bc090c545 383 Pfam PF07690 Major Facilitator Superfamily 208 379 3.7E-11 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS03305 b9390b9ae7739e8837a4026bc090c545 383 Pfam PF07690 Major Facilitator Superfamily 10 180 7.6E-31 T 23-04-2016 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 SHYC_RS03305 b9390b9ae7739e8837a4026bc090c545 383 PANTHER PTHR23501:SF88 4 376 6.4E-94 T 23-04-2016 SHYC_RS03070 b1f8265b1ea1c9945936bd28d53ba24d 91 Gene3D G3DSA:3.30.70.330 2 90 3.7E-33 T 23-04-2016 IPR012677 Nucleotide-binding alpha-beta plait domain GO:0000166 SHYC_RS03070 b1f8265b1ea1c9945936bd28d53ba24d 91 Pfam PF00276 Ribosomal protein L23 5 86 2.1E-31 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SHYC_RS03070 b1f8265b1ea1c9945936bd28d53ba24d 91 SUPERFAMILY SSF54189 1 86 1.08E-30 T 23-04-2016 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 SHYC_RS03070 b1f8265b1ea1c9945936bd28d53ba24d 91 PANTHER PTHR11620 1 91 5.1E-30 T 23-04-2016 SHYC_RS03070 b1f8265b1ea1c9945936bd28d53ba24d 91 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 91 20.247 T 23-04-2016 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 SHYC_RS04300 789d61499cc8a4e600df9cf80772ba27 347 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 250 340 4.5E-8 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS04300 789d61499cc8a4e600df9cf80772ba27 347 SMART SM00387 248 341 3.7E-7 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS04300 789d61499cc8a4e600df9cf80772ba27 347 PIRSF PIRSF037431 2 347 6.9E-120 T 23-04-2016 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 SHYC_RS04300 789d61499cc8a4e600df9cf80772ba27 347 Pfam PF07730 Histidine kinase 147 210 6.0E-17 T 23-04-2016 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 SHYC_RS04300 789d61499cc8a4e600df9cf80772ba27 347 PANTHER PTHR24421 11 342 9.4E-86 T 23-04-2016 SHYC_RS04300 789d61499cc8a4e600df9cf80772ba27 347 SUPERFAMILY SSF55874 220 338 1.44E-16 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS04300 789d61499cc8a4e600df9cf80772ba27 347 Gene3D G3DSA:3.30.565.10 216 342 1.3E-11 T 23-04-2016 IPR003594 Histidine kinase-like ATPase, C-terminal domain SHYC_RS04300 789d61499cc8a4e600df9cf80772ba27 347 PANTHER PTHR24421:SF1 11 342 9.4E-86 T 23-04-2016 SHYC_RS01070 134d2514e6baf3466012adf66935712d 300 TIGRFAM TIGR03711 acc_sec_asp3: accessory Sec system protein Asp3 6 139 1.9E-40 T 23-04-2016 IPR022259 Accessory Sec system protein Asp3 GO:0015031 SHYC_RS01070 134d2514e6baf3466012adf66935712d 300 Pfam PF15432 Accessory Sec secretory system ASP3 17 140 5.1E-38 T 23-04-2016 IPR022259 Accessory Sec system protein Asp3 GO:0015031 SHYC_RS00650 cea13990b4383e96abfab239f1985e54 276 PANTHER PTHR39430 1 269 5.1E-14 T 23-04-2016 SHYC_RS00650 cea13990b4383e96abfab239f1985e54 276 Pfam PF02517 CAAX protease self-immunity 118 212 5.1E-13 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SHYC_RS00765 2bef3732e6460e3c23e3707b6a38c44a 160 PANTHER PTHR10057 16 156 5.0E-31 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 SHYC_RS00765 2bef3732e6460e3c23e3707b6a38c44a 160 PIRSF PIRSF005859 4 155 8.0E-35 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 SHYC_RS00765 2bef3732e6460e3c23e3707b6a38c44a 160 Pfam PF03073 TspO/MBR family 17 149 1.2E-36 T 23-04-2016 IPR004307 TspO/MBR-related protein GO:0016021 SHYC_RS04580 f2d4abc6eef5c1f87eb7d7aa656b1637 352 Pfam PF13303 Phosphotransferase system, EIIC 14 335 6.1E-82 T 23-04-2016 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 SHYC_RS04580 f2d4abc6eef5c1f87eb7d7aa656b1637 352 PANTHER PTHR41320 1 349 5.8E-103 T 23-04-2016 SHYC_RS11715 ee1180aa98cfc57fbd51d9821cbf4ba8 305 SUPERFAMILY SSF51261 50 302 1.83E-44 T 23-04-2016 IPR011055 Duplicated hybrid motif SHYC_RS11715 ee1180aa98cfc57fbd51d9821cbf4ba8 305 PANTHER PTHR21666 199 302 4.4E-33 T 23-04-2016 SHYC_RS11715 ee1180aa98cfc57fbd51d9821cbf4ba8 305 Gene3D G3DSA:2.70.70.10 160 303 2.8E-37 T 23-04-2016 SHYC_RS11715 ee1180aa98cfc57fbd51d9821cbf4ba8 305 Pfam PF01551 Peptidase family M23 198 292 3.6E-29 T 23-04-2016 IPR016047 Peptidase M23 SHYC_RS09770 b504829451d91452ff0adfbb76a70a3e 164 PANTHER PTHR34390 1 160 2.9E-41 T 23-04-2016 SHYC_RS09770 b504829451d91452ff0adfbb76a70a3e 164 Pfam PF12821 Threonine/Serine exporter, ThrE 7 134 2.6E-37 T 23-04-2016 IPR024528 Threonine/Serine exporter, ThrE SHYC_RS09980 d8e37f947a96ac41451028858e2af7a5 205 Pfam PF07099 Protein of unknown function (DUF1361) 30 193 2.1E-31 T 23-04-2016 IPR009793 Protein of unknown function DUF1361 SHYC_RS11265 f1339499f85a90fbd4aeaa3eef92fd4c 438 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 15 387 4.4E-109 T 23-04-2016 IPR018778 Type VII secretion system EssB SHYC_RS11265 f1339499f85a90fbd4aeaa3eef92fd4c 438 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 30 386 9.4E-99 T 23-04-2016 IPR018778 Type VII secretion system EssB SHYC_RS11240 2bd54f97c18aefc7401549ba4a33f744 216 Pfam PF16882 Domain of unknown function (DUF5079) 8 202 8.8E-11 T 23-04-2016 IPR031690 Protein of unknown function DUF5079 SHYC_RS06670 ee4f43db0c002d75255467956ef54ee8 148 PIRSF PIRSF021292 6 146 1.9E-25 T 23-04-2016 IPR016785 ComG operon protein 4 GO:0030420 SHYC_RS06670 ee4f43db0c002d75255467956ef54ee8 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 30 9.8E-5 T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site SHYC_RS06670 ee4f43db0c002d75255467956ef54ee8 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 23-04-2016 IPR012902 Prokaryotic N-terminal methylation site SHYC_RS07550 35dd490b6622cc68ebe7da1e84c88206 121 SUPERFAMILY SSF46785 16 119 2.43E-14 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07550 35dd490b6622cc68ebe7da1e84c88206 121 Pfam PF13463 Winged helix DNA-binding domain 35 99 5.6E-7 T 23-04-2016 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 SHYC_RS07550 35dd490b6622cc68ebe7da1e84c88206 121 Gene3D G3DSA:1.10.10.10 18 119 9.1E-18 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS07580 b7b6989aa6325bdb8e2c7c6a8f034cf9 241 PANTHER PTHR30294:SF6 234 241 1.3E-23 T 23-04-2016 SHYC_RS07580 b7b6989aa6325bdb8e2c7c6a8f034cf9 241 PANTHER PTHR30294:SF6 8 212 1.3E-23 T 23-04-2016 SHYC_RS07580 b7b6989aa6325bdb8e2c7c6a8f034cf9 241 PANTHER PTHR30294 234 241 1.3E-23 T 23-04-2016 SHYC_RS07580 b7b6989aa6325bdb8e2c7c6a8f034cf9 241 PANTHER PTHR30294 8 212 1.3E-23 T 23-04-2016 SHYC_RS03980 c04f89706116ccf660a9bd72999580d2 74 PANTHER PTHR33279:SF4 1 73 1.4E-45 T 23-04-2016 SHYC_RS03980 c04f89706116ccf660a9bd72999580d2 74 SUPERFAMILY SSF64307 2 73 3.66E-19 T 23-04-2016 IPR001455 TusA-like domain SHYC_RS03980 c04f89706116ccf660a9bd72999580d2 74 Pfam PF01206 Sulfurtransferase TusA 7 73 2.7E-16 T 23-04-2016 IPR001455 TusA-like domain SHYC_RS03980 c04f89706116ccf660a9bd72999580d2 74 Gene3D G3DSA:3.30.110.40 3 73 1.5E-20 T 23-04-2016 IPR001455 TusA-like domain SHYC_RS03980 c04f89706116ccf660a9bd72999580d2 74 PANTHER PTHR33279 1 73 1.4E-45 T 23-04-2016 SHYC_RS02945 cc90e01d2bfa07dc3370bbcfb24aa84c 333 SUPERFAMILY SSF69572 3 323 2.22E-73 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHYC_RS02945 cc90e01d2bfa07dc3370bbcfb24aa84c 333 PANTHER PTHR10953:SF156 1 267 5.5E-120 T 23-04-2016 SHYC_RS02945 cc90e01d2bfa07dc3370bbcfb24aa84c 333 Pfam PF00899 ThiF family 5 239 6.7E-52 T 23-04-2016 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 SHYC_RS02945 cc90e01d2bfa07dc3370bbcfb24aa84c 333 PANTHER PTHR10953 1 267 5.5E-120 T 23-04-2016 SHYC_RS02945 cc90e01d2bfa07dc3370bbcfb24aa84c 333 Gene3D G3DSA:3.40.50.720 2 242 1.8E-58 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS04980 4b67692180664327b980fedf20d20fe2 118 Gene3D G3DSA:2.30.30.290 51 116 9.6E-15 T 23-04-2016 IPR023385 YopX-like domain, beta barrel type SHYC_RS04980 4b67692180664327b980fedf20d20fe2 118 SUPERFAMILY SSF159006 1 115 9.16E-27 T 23-04-2016 SHYC_RS04980 4b67692180664327b980fedf20d20fe2 118 Pfam PF09643 YopX protein 4 115 1.5E-21 T 23-04-2016 IPR019096 YopX protein SHYC_RS00655 7d98c5c9ce470723875f28142f9b947a 288 SUPERFAMILY SSF53474 43 281 1.28E-13 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00655 7d98c5c9ce470723875f28142f9b947a 288 Gene3D G3DSA:3.40.50.1820 42 287 1.5E-88 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS00655 7d98c5c9ce470723875f28142f9b947a 288 Pfam PF06028 Alpha/beta hydrolase of unknown function (DUF915) 36 287 1.9E-87 T 23-04-2016 IPR010315 Protein of unknown function DUF915, hydrolase-like SHYC_RS00750 60fa01335c751bd1ba01b7dd55c7167c 165 Pfam PF05656 Protein of unknown function (DUF805) 19 152 3.8E-18 T 23-04-2016 IPR008523 Protein of unknown function DUF805 GO:0016021 SHYC_RS01810 6378a6c00f1e08877b428e0c2a41de61 352 PANTHER PTHR32347:SF14 92 225 1.9E-15 T 23-04-2016 SHYC_RS01810 6378a6c00f1e08877b428e0c2a41de61 352 PANTHER PTHR32347 92 225 1.9E-15 T 23-04-2016 SHYC_RS01810 6378a6c00f1e08877b428e0c2a41de61 352 Gene3D G3DSA:2.40.50.100 70 96 2.4E-4 T 23-04-2016 SHYC_RS01810 6378a6c00f1e08877b428e0c2a41de61 352 Gene3D G3DSA:2.40.50.100 216 244 2.4E-4 T 23-04-2016 SHYC_RS01810 6378a6c00f1e08877b428e0c2a41de61 352 PANTHER PTHR32347 254 352 1.9E-15 T 23-04-2016 SHYC_RS01810 6378a6c00f1e08877b428e0c2a41de61 352 PANTHER PTHR32347:SF14 254 352 1.9E-15 T 23-04-2016 SHYC_RS07450 862d7118c1b287f0f37c3c5b730a9736 157 PANTHER PTHR39164 2 156 4.2E-57 T 23-04-2016 SHYC_RS07450 862d7118c1b287f0f37c3c5b730a9736 157 Pfam PF07301 Protein of unknown function (DUF1453) 6 148 4.5E-53 T 23-04-2016 IPR009916 Protein of unknown function DUF1453 SHYC_RS07450 862d7118c1b287f0f37c3c5b730a9736 157 PIRSF PIRSF021441 1 157 5.8E-61 T 23-04-2016 IPR031306 CcdC protein SHYC_RS02095 982b9399eff220aea0e5e8d94190bdc3 196 PANTHER PTHR30576:SF8 1 184 4.5E-93 T 23-04-2016 SHYC_RS02095 982b9399eff220aea0e5e8d94190bdc3 196 PANTHER PTHR30576 1 184 4.5E-93 T 23-04-2016 SHYC_RS02095 982b9399eff220aea0e5e8d94190bdc3 196 Pfam PF02397 Bacterial sugar transferase 2 176 9.5E-55 T 23-04-2016 IPR003362 Bacterial sugar transferase SHYC_RS09455 c71db94fe9509b10450b2803c57c1d1a 282 Pfam PF04018 Domain of unknown function (DUF368) 15 253 8.5E-50 T 23-04-2016 IPR007163 Protein of unknown function DUF368 SHYC_RS09455 c71db94fe9509b10450b2803c57c1d1a 282 PANTHER PTHR37308 1 275 4.0E-69 T 23-04-2016 SHYC_RS08955 b221782f886b0c3163de92c4910c03bc 75 Pfam PF08858 IDEAL domain 27 63 1.2E-12 T 23-04-2016 IPR014957 IDEAL domain SHYC_RS08955 b221782f886b0c3163de92c4910c03bc 75 SMART SM00914 27 63 2.2E-11 T 23-04-2016 IPR014957 IDEAL domain SHYC_RS05175 ce98106aba32dbcd5bb354607188a94d 254 SUPERFAMILY SSF53335 92 245 1.89E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS05175 ce98106aba32dbcd5bb354607188a94d 254 Pfam PF02005 N2,N2-dimethylguanosine tRNA methyltransferase 121 175 4.7E-6 T 23-04-2016 IPR002905 tRNA methyltransferase, Trm1 GO:0003723|GO:0004809|GO:0008033 KEGG: 00680+2.1.1.21|MetaCyc: PWY-6829|MetaCyc: PWY-6965 SHYC_RS11710 89a09d27236bb7d5cc1bade188de9fe2 92 Pfam PF14542 GCN5-related N-acetyl-transferase 11 89 2.7E-23 T 23-04-2016 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase SHYC_RS11710 89a09d27236bb7d5cc1bade188de9fe2 92 Gene3D G3DSA:3.40.630.30 3 91 1.9E-32 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS11710 89a09d27236bb7d5cc1bade188de9fe2 92 SUPERFAMILY SSF55729 2 90 5.4E-25 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS11710 89a09d27236bb7d5cc1bade188de9fe2 92 PANTHER PTHR31435:SF3 2 89 3.7E-22 T 23-04-2016 SHYC_RS11710 89a09d27236bb7d5cc1bade188de9fe2 92 PANTHER PTHR31435 2 89 3.7E-22 T 23-04-2016 SHYC_RS05330 74ecea75a86f4cbbd0a7021b26e139b5 975 SUPERFAMILY SSF52540 771 954 3.39E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05330 74ecea75a86f4cbbd0a7021b26e139b5 975 SUPERFAMILY SSF52540 1 51 3.39E-10 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS05330 74ecea75a86f4cbbd0a7021b26e139b5 975 Gene3D G3DSA:3.40.1140.10 891 953 2.2E-16 T 23-04-2016 SHYC_RS05330 74ecea75a86f4cbbd0a7021b26e139b5 975 Gene3D G3DSA:3.40.1140.10 1 86 2.2E-16 T 23-04-2016 SHYC_RS05330 74ecea75a86f4cbbd0a7021b26e139b5 975 PANTHER PTHR41259:SF1 1 973 2.3E-196 T 23-04-2016 SHYC_RS05330 74ecea75a86f4cbbd0a7021b26e139b5 975 Pfam PF13514 AAA domain 1 207 1.1E-22 T 23-04-2016 SHYC_RS05330 74ecea75a86f4cbbd0a7021b26e139b5 975 PANTHER PTHR41259 1 973 2.3E-196 T 23-04-2016 SHYC_RS11370 4ca479d5a55b106686a730fa40c9c313 430 Gene3D G3DSA:3.40.50.720 4 180 5.2E-4 T 23-04-2016 IPR016040 NAD(P)-binding domain SHYC_RS11370 4ca479d5a55b106686a730fa40c9c313 430 Pfam PF10100 Uncharacterized protein conserved in bacteria (DUF2338) 5 425 3.3E-169 T 23-04-2016 IPR016935 Protein of unknown function DUF2338 SHYC_RS01300 83a9068ac7eb776cc26cd31dfdd31e1f 338 SUPERFAMILY SSF53474 54 336 6.67E-34 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01300 83a9068ac7eb776cc26cd31dfdd31e1f 338 PANTHER PTHR23024 71 338 8.7E-25 T 23-04-2016 SHYC_RS01300 83a9068ac7eb776cc26cd31dfdd31e1f 338 Gene3D G3DSA:3.40.50.1820 72 336 1.3E-38 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01300 83a9068ac7eb776cc26cd31dfdd31e1f 338 Pfam PF07859 alpha/beta hydrolase fold 99 300 1.9E-21 T 23-04-2016 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 SHYC_RS04280 ca1ae569e5da0e166a65be87292b5c1f 341 PANTHER PTHR30509 5 265 8.2E-33 T 23-04-2016 SHYC_RS04280 ca1ae569e5da0e166a65be87292b5c1f 341 Pfam PF06081 Aromatic acid exporter family member 1 10 148 3.4E-31 T 23-04-2016 IPR010343 Aromatic acid exporter family member 1 SHYC_RS01345 f73a2859d0fe79862e2721fc2de368fe 162 SUPERFAMILY SSF53474 43 154 1.02E-11 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01345 f73a2859d0fe79862e2721fc2de368fe 162 Gene3D G3DSA:3.40.50.1820 48 160 3.5E-7 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01535 55b82fe8300628042e856cafd1f181fa 90 Pfam PF10078 Uncharacterized protein conserved in bacteria (DUF2316) 1 85 3.3E-15 T 23-04-2016 IPR018757 Protein of unknown function DUF2316 SHYC_RS08245 b000765fc14b3733545521c771946b65 256 Gene3D G3DSA:3.10.290.10 178 232 1.1E-13 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS08245 b000765fc14b3733545521c771946b65 256 PANTHER PTHR32219 1 256 1.8E-63 T 23-04-2016 SHYC_RS08245 b000765fc14b3733545521c771946b65 256 SUPERFAMILY SSF55174 176 249 1.7E-27 T 23-04-2016 SHYC_RS08245 b000765fc14b3733545521c771946b65 256 SUPERFAMILY SSF55174 36 125 1.7E-27 T 23-04-2016 SHYC_RS08245 b000765fc14b3733545521c771946b65 256 Pfam PF01479 S4 domain 179 224 6.4E-7 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS08245 b000765fc14b3733545521c771946b65 256 PANTHER PTHR32219:SF5 1 256 1.8E-63 T 23-04-2016 SHYC_RS08245 b000765fc14b3733545521c771946b65 256 SMART SM00363 179 248 2.1E-8 T 23-04-2016 IPR002942 RNA-binding S4 domain GO:0003723 SHYC_RS06360 5e4bbca100e636ce48ea8b03fd042014 366 Pfam PF01926 50S ribosome-binding GTPase 163 225 4.4E-14 T 23-04-2016 IPR006073 GTP binding domain GO:0005525 SHYC_RS06360 5e4bbca100e636ce48ea8b03fd042014 366 PANTHER PTHR11089:SF34 3 366 7.0E-179 T 23-04-2016 SHYC_RS06360 5e4bbca100e636ce48ea8b03fd042014 366 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 365 3.1E-146 T 23-04-2016 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH SHYC_RS06360 5e4bbca100e636ce48ea8b03fd042014 366 PANTHER PTHR11089 3 366 7.0E-179 T 23-04-2016 SHYC_RS06360 5e4bbca100e636ce48ea8b03fd042014 366 SUPERFAMILY SSF52540 69 280 4.59E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS06360 5e4bbca100e636ce48ea8b03fd042014 366 Gene3D G3DSA:3.40.50.300 72 222 1.5E-33 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS03645 3e0d192ac1cd28ac9357ebc41351eebc 121 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 27 115 0.007 T 23-04-2016 SHYC_RS03645 3e0d192ac1cd28ac9357ebc41351eebc 121 Pfam PF03899 ATP synthase I chain 12 101 3.3E-6 T 23-04-2016 IPR005598 ATP synthase protein I SHYC_RS02490 493e2deb60127a3f9fe671198b506d3d 199 Pfam PF07987 Domain of unkown function (DUF1775) 21 147 6.7E-19 T 23-04-2016 IPR012533 GLE1, N-terminal, bacteria SHYC_RS10230 c57b3f0ad2d29f2ec5274e04ae32d1a6 53 Pfam PF12669 Virus attachment protein p12 family 6 44 1.6E-8 T 23-04-2016 SHYC_RS11055 b8cba5007250be5ce1662fe534db52d7 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 1.1E-53 T 23-04-2016 IPR010375 Cyclic-di-AMP receptor SHYC_RS11055 b8cba5007250be5ce1662fe534db52d7 109 SUPERFAMILY SSF54913 1 107 1.47E-13 T 23-04-2016 IPR011322 Nitrogen regulatory PII-like, alpha/beta SHYC_RS11055 b8cba5007250be5ce1662fe534db52d7 109 PANTHER PTHR38456 2 109 1.4E-45 T 23-04-2016 SHYC_RS11055 b8cba5007250be5ce1662fe534db52d7 109 Gene3D G3DSA:3.30.70.120 1 107 3.4E-14 T 23-04-2016 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal SHYC_RS01320 d9ca298eb858e9aa661808a063424a47 162 SUPERFAMILY SSF53474 32 155 4.15E-9 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01320 d9ca298eb858e9aa661808a063424a47 162 Gene3D G3DSA:3.40.50.1820 40 113 1.3E-4 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS02655 62d0eb5307a815a7d290f206e118d220 110 SUPERFAMILY SSF103481 10 109 1.05E-12 T 23-04-2016 SHYC_RS02655 62d0eb5307a815a7d290f206e118d220 110 PANTHER PTHR36116 1 110 2.7E-45 T 23-04-2016 SHYC_RS02655 62d0eb5307a815a7d290f206e118d220 110 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 4 109 21.142 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 SHYC_RS02655 62d0eb5307a815a7d290f206e118d220 110 PANTHER PTHR36116:SF1 1 110 2.7E-45 T 23-04-2016 SHYC_RS02655 62d0eb5307a815a7d290f206e118d220 110 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 5 110 4.3E-41 T 23-04-2016 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 SHYC_RS03230 2b53ace7695b1e99516ad7de7da311ff 301 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 84 289 3.9E-50 T 23-04-2016 IPR018728 Domain of unknown function DUF2268 SHYC_RS07965 da4da12d6ebf07989662055526703333 132 Pfam PF04138 GtrA-like protein 18 129 1.4E-20 T 23-04-2016 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 SHYC_RS11905 d105c82ddd61ddfcbe0fdcef3570700c 132 Pfam PF16882 Domain of unknown function (DUF5079) 2 127 7.1E-23 T 23-04-2016 IPR031690 Protein of unknown function DUF5079 SHYC_RS01400 9be446c33144b09d96fb4a58c146bfb8 185 Gene3D G3DSA:3.40.50.1390 47 118 5.9E-5 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHYC_RS01400 9be446c33144b09d96fb4a58c146bfb8 185 SUPERFAMILY SSF53041 33 121 3.66E-6 T 23-04-2016 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 SHYC_RS01870 020021b22402a2e793a5281569003c05 194 Pfam PF16729 Domain of unknown function (DUF5067) 45 172 8.6E-19 T 23-04-2016 IPR031989 Domain of unknown function DUF5067 SHYC_RS06980 3c8ea6a88e6d6f10474ea6f7eb34c9ea 318 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 78 92 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHYC_RS06980 3c8ea6a88e6d6f10474ea6f7eb34c9ea 318 SUPERFAMILY SSF48576 9 317 7.2E-82 T 23-04-2016 IPR008949 Isoprenoid synthase domain SHYC_RS06980 3c8ea6a88e6d6f10474ea6f7eb34c9ea 318 PANTHER PTHR12001 5 318 8.4E-96 T 23-04-2016 IPR017446 Polyprenyl synthetase-related SHYC_RS06980 3c8ea6a88e6d6f10474ea6f7eb34c9ea 318 Gene3D G3DSA:1.10.600.10 6 316 1.6E-87 T 23-04-2016 IPR008949 Isoprenoid synthase domain SHYC_RS06980 3c8ea6a88e6d6f10474ea6f7eb34c9ea 318 Pfam PF00348 Polyprenyl synthetase 27 258 5.2E-65 T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHYC_RS06980 3c8ea6a88e6d6f10474ea6f7eb34c9ea 318 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 200 212 - T 23-04-2016 IPR000092 Polyprenyl synthetase GO:0008299 SHYC_RS06980 3c8ea6a88e6d6f10474ea6f7eb34c9ea 318 PANTHER PTHR12001:SF47 5 318 8.4E-96 T 23-04-2016 SHYC_RS07225 d61100691285a3d3e12f8e6fdf0842a8 261 SUPERFAMILY SSF52540 18 242 6.86E-36 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07225 d61100691285a3d3e12f8e6fdf0842a8 261 PANTHER PTHR22908 7 245 7.6E-60 T 23-04-2016 SHYC_RS07225 d61100691285a3d3e12f8e6fdf0842a8 261 Pfam PF07728 AAA domain (dynein-related subfamily) 24 162 5.4E-27 T 23-04-2016 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 SHYC_RS07225 d61100691285a3d3e12f8e6fdf0842a8 261 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 25 43 2.0E-5 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS07225 d61100691285a3d3e12f8e6fdf0842a8 261 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 98 116 2.0E-5 T 23-04-2016 IPR001270 ClpA/B family GO:0005524 SHYC_RS07225 d61100691285a3d3e12f8e6fdf0842a8 261 Gene3D G3DSA:3.40.50.300 15 179 2.0E-35 T 23-04-2016 IPR027417 P-loop containing nucleoside triphosphate hydrolase SHYC_RS07225 d61100691285a3d3e12f8e6fdf0842a8 261 Pfam PF08406 CbbQ/NirQ/NorQ C-terminal 178 252 5.3E-5 T 23-04-2016 IPR013615 CbbQ/NirQ/NorQ, C-terminal SHYC_RS07225 d61100691285a3d3e12f8e6fdf0842a8 261 SMART SM00382 21 168 2.8E-4 T 23-04-2016 IPR003593 AAA+ ATPase domain SHYC_RS00130 d46237744ef07fbd67543d031d48afa8 301 PANTHER PTHR41324:SF1 1 301 1.1E-44 T 23-04-2016 SHYC_RS00130 d46237744ef07fbd67543d031d48afa8 301 Pfam PF09991 Predicted membrane protein (DUF2232) 15 289 1.1E-42 T 23-04-2016 IPR018710 Protein of unknown function DUF2232 SHYC_RS00130 d46237744ef07fbd67543d031d48afa8 301 PANTHER PTHR41324 1 301 1.1E-44 T 23-04-2016 SHYC_RS04330 792588270c1b48d3df954a373f5b8259 69 Pfam PF06569 Protein of unknown function (DUF1128) 2 67 7.9E-26 T 23-04-2016 IPR009507 Protein of unknown function UPF0435 SHYC_RS04390 c7bd8850e85542940806bd450d7b2379 325 PANTHER PTHR40031:SF1 2 325 4.0E-102 T 23-04-2016 SHYC_RS04390 c7bd8850e85542940806bd450d7b2379 325 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 157 1.0E-26 T 23-04-2016 IPR007404 LexA-binding, inner membrane-associated putative hydrolase SHYC_RS04390 c7bd8850e85542940806bd450d7b2379 325 PANTHER PTHR40031 2 325 4.0E-102 T 23-04-2016 SHYC_RS11280 d41f7cdcae20a41812f9932cde9c547c 1024 TIGRFAM TIGR03929 T7_esaA_Nterm: type VII secretion protein EsaA 11 206 4.5E-61 T 23-04-2016 IPR023838 Type VII secretion system EsaA GO:0016021 SHYC_RS11280 d41f7cdcae20a41812f9932cde9c547c 1024 PANTHER PTHR14754:SF19 719 1015 2.4E-26 T 23-04-2016 SHYC_RS11280 d41f7cdcae20a41812f9932cde9c547c 1024 PANTHER PTHR14754 719 1015 2.4E-26 T 23-04-2016 SHYC_RS08325 09d839077a2ae6a6a777d30fcd81181c 44 Pfam PF05480 Staphylococcus haemolytic protein 1 43 2.7E-17 T 23-04-2016 IPR008846 Staphylococcal hemolytic protein family GO:0009405 SHYC_RS10030 a92529479f8a71de093e99cfbb4dbdec 284 Pfam PF02673 Bacitracin resistance protein BacA 9 273 2.3E-70 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SHYC_RS10030 a92529479f8a71de093e99cfbb4dbdec 284 PANTHER PTHR30622 3 283 2.3E-116 T 23-04-2016 SHYC_RS10030 a92529479f8a71de093e99cfbb4dbdec 284 PANTHER PTHR30622:SF3 3 283 2.3E-116 T 23-04-2016 SHYC_RS10030 a92529479f8a71de093e99cfbb4dbdec 284 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 271 1.4E-79 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SHYC_RS10030 a92529479f8a71de093e99cfbb4dbdec 284 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 279 17.261 T 23-04-2016 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 SHYC_RS06885 94574dadbff46d7cbecf521dff5a9f99 244 PANTHER PTHR33969:SF2 1 242 5.7E-72 T 23-04-2016 SHYC_RS06885 94574dadbff46d7cbecf521dff5a9f99 244 Hamap MF_01805 Segregation and condensation protein A [scpA]. 2 238 23.858 T 23-04-2016 IPR003768 Segregation and condensation protein A SHYC_RS06885 94574dadbff46d7cbecf521dff5a9f99 244 Pfam PF02616 Segregation and condensation protein ScpA 19 235 4.9E-37 T 23-04-2016 IPR003768 Segregation and condensation protein A SHYC_RS06885 94574dadbff46d7cbecf521dff5a9f99 244 PANTHER PTHR33969 1 242 5.7E-72 T 23-04-2016 SHYC_RS08825 c469163c5e9208d253290e2663b71ab5 378 PANTHER PTHR12526 33 377 7.9E-21 T 23-04-2016 SHYC_RS08825 c469163c5e9208d253290e2663b71ab5 378 SUPERFAMILY SSF53756 33 374 6.67E-37 T 23-04-2016 SHYC_RS08825 c469163c5e9208d253290e2663b71ab5 378 Pfam PF00534 Glycosyl transferases group 1 227 352 6.4E-15 T 23-04-2016 IPR001296 Glycosyl transferase, family 1 SHYC_RS08825 c469163c5e9208d253290e2663b71ab5 378 Gene3D G3DSA:3.40.50.2000 233 354 4.4E-16 T 23-04-2016 SHYC_RS04145 b44568ee7b92ea1cb11ec4bddaeb2e3e 183 SUPERFAMILY SSF52499 2 181 1.96E-48 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHYC_RS04145 b44568ee7b92ea1cb11ec4bddaeb2e3e 183 Pfam PF00857 Isochorismatase family 5 179 6.7E-34 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHYC_RS04145 b44568ee7b92ea1cb11ec4bddaeb2e3e 183 PANTHER PTHR11080:SF2 3 183 7.6E-41 T 23-04-2016 SHYC_RS04145 b44568ee7b92ea1cb11ec4bddaeb2e3e 183 Gene3D G3DSA:3.40.50.850 1 182 7.9E-44 T 23-04-2016 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 SHYC_RS04145 b44568ee7b92ea1cb11ec4bddaeb2e3e 183 PANTHER PTHR11080 3 183 7.6E-41 T 23-04-2016 SHYC_RS06290 b38f2ae1ca26a066e9c70acdf93b7754 106 Pfam PF06949 Protein of unknown function (DUF1292) 25 102 4.9E-11 T 23-04-2016 IPR009711 Uncharacterised protein family UPF0473 SHYC_RS06290 b38f2ae1ca26a066e9c70acdf93b7754 106 Hamap MF_01448 UPF0473 protein . 16 103 18.365 T 23-04-2016 IPR009711 Uncharacterised protein family UPF0473 SHYC_RS06290 b38f2ae1ca26a066e9c70acdf93b7754 106 PANTHER PTHR40066 6 106 9.6E-25 T 23-04-2016 SHYC_RS06290 b38f2ae1ca26a066e9c70acdf93b7754 106 PANTHER PTHR40066:SF1 6 106 9.6E-25 T 23-04-2016 SHYC_RS08490 694c9f2fda868d59c7b663303aac32b3 357 PANTHER PTHR31157:SF13 44 337 6.8E-28 T 23-04-2016 SHYC_RS08490 694c9f2fda868d59c7b663303aac32b3 357 Pfam PF00188 Cysteine-rich secretory protein family 242 337 1.3E-7 T 23-04-2016 IPR014044 CAP domain SHYC_RS08490 694c9f2fda868d59c7b663303aac32b3 357 PANTHER PTHR31157 44 337 6.8E-28 T 23-04-2016 SHYC_RS08490 694c9f2fda868d59c7b663303aac32b3 357 Pfam PF14504 CAP-associated N-terminal 68 208 1.3E-36 T 23-04-2016 IPR029410 CAP-associated domain SHYC_RS08490 694c9f2fda868d59c7b663303aac32b3 357 SUPERFAMILY SSF55797 237 337 4.97E-8 T 23-04-2016 IPR014044 CAP domain SHYC_RS04635 9abb38b2f5ca1f8c00b70306b1e5cda8 276 PANTHER PTHR11079:SF91 72 269 6.9E-89 T 23-04-2016 SHYC_RS04635 9abb38b2f5ca1f8c00b70306b1e5cda8 276 Pfam PF00849 RNA pseudouridylate synthase 83 230 3.7E-24 T 23-04-2016 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS04635 9abb38b2f5ca1f8c00b70306b1e5cda8 276 SUPERFAMILY SSF55120 67 271 6.08E-49 T 23-04-2016 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 SHYC_RS04635 9abb38b2f5ca1f8c00b70306b1e5cda8 276 PANTHER PTHR11079 72 269 6.9E-89 T 23-04-2016 SHYC_RS06870 1b8953a3ae160f59fab84460db7abbf2 150 SUPERFAMILY SSF46785 7 141 1.05E-37 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06870 1b8953a3ae160f59fab84460db7abbf2 150 Gene3D G3DSA:1.10.10.10 6 86 1.8E-28 T 23-04-2016 IPR011991 Winged helix-turn-helix DNA-binding domain SHYC_RS06870 1b8953a3ae160f59fab84460db7abbf2 150 Pfam PF01475 Ferric uptake regulator family 15 136 2.0E-38 T 23-04-2016 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 SHYC_RS06870 1b8953a3ae160f59fab84460db7abbf2 150 PANTHER PTHR33202 1 144 4.9E-47 T 23-04-2016 SHYC_RS00590 90d08adb60ef2295f0b44d2aee5a5325 249 Pfam PF04507 Protein of unknown function, DUF576 1 247 5.4E-102 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS00590 90d08adb60ef2295f0b44d2aee5a5325 249 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 1 246 1.8E-88 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS10500 8b879d8f98268543386acead522a730c 276 PANTHER PTHR20858:SF19 1 266 1.7E-164 T 23-04-2016 SHYC_RS10500 8b879d8f98268543386acead522a730c 276 SUPERFAMILY SSF53613 4 267 8.11E-66 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS10500 8b879d8f98268543386acead522a730c 276 Gene3D G3DSA:3.40.1190.20 4 260 2.4E-79 T 23-04-2016 IPR029056 Ribokinase-like SHYC_RS10500 8b879d8f98268543386acead522a730c 276 Pfam PF08543 Phosphomethylpyrimidine kinase 13 259 3.8E-77 T 23-04-2016 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase UniPathway: UPA00647 SHYC_RS10500 8b879d8f98268543386acead522a730c 276 PANTHER PTHR20858 1 266 1.7E-164 T 23-04-2016 SHYC_RS10500 8b879d8f98268543386acead522a730c 276 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 260 3.5E-72 T 23-04-2016 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 SHYC_RS07375 3d09f4372abe1d950c7a8b9142a4eaf1 839 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 526 818 2.6E-78 T 23-04-2016 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal SHYC_RS07375 3d09f4372abe1d950c7a8b9142a4eaf1 839 PANTHER PTHR34697 1 838 2.9E-235 T 23-04-2016 SHYC_RS07375 3d09f4372abe1d950c7a8b9142a4eaf1 839 PANTHER PTHR34697:SF2 1 838 2.9E-235 T 23-04-2016 SHYC_RS07375 3d09f4372abe1d950c7a8b9142a4eaf1 839 SUPERFAMILY SSF55729 637 816 5.14E-12 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS07375 3d09f4372abe1d950c7a8b9142a4eaf1 839 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 12 287 1.2E-13 T 23-04-2016 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD SHYC_RS08665 0e08c0ffaa19fdee0ab11744032d6f87 75 SUPERFAMILY SSF52833 1 73 1.05E-12 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS08665 0e08c0ffaa19fdee0ab11744032d6f87 75 Gene3D G3DSA:3.40.30.10 3 74 4.3E-15 T 23-04-2016 IPR012336 Thioredoxin-like fold SHYC_RS08665 0e08c0ffaa19fdee0ab11744032d6f87 75 Pfam PF00462 Glutaredoxin 4 59 3.3E-9 T 23-04-2016 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 SHYC_RS05255 c020c08a92c0c221a32ba1c2d991ed0d 237 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 74 189 2.4E-23 T 23-04-2016 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31|UniPathway: UPA00031 SHYC_RS05255 c020c08a92c0c221a32ba1c2d991ed0d 237 Gene3D G3DSA:1.10.3420.10 68 235 4.6E-47 T 23-04-2016 IPR023292 NTP pyrophosphohydrolase-like domain SHYC_RS11425 bdf7152439f2aa151cbb2588d260763c 125 Pfam PF04304 Protein of unknown function (DUF454) 2 113 3.7E-36 T 23-04-2016 IPR007401 Protein of unknown function DUF454 SHYC_RS11425 bdf7152439f2aa151cbb2588d260763c 125 PANTHER PTHR35813:SF1 1 125 2.7E-39 T 23-04-2016 SHYC_RS11425 bdf7152439f2aa151cbb2588d260763c 125 PIRSF PIRSF016789 1 122 5.0E-39 T 23-04-2016 IPR007401 Protein of unknown function DUF454 SHYC_RS11425 bdf7152439f2aa151cbb2588d260763c 125 PANTHER PTHR35813 1 125 2.7E-39 T 23-04-2016 SHYC_RS05025 714d48fb682c7bb05ea4c8d0354bf8ae 161 SUPERFAMILY SSF101386 4 160 6.47E-6 T 23-04-2016 SHYC_RS11430 2935ea1635c97906660087fb664314da 116 Pfam PF13273 Protein of unknown function (DUF4064) 11 93 6.6E-10 T 23-04-2016 IPR025273 Domain of unknown function DUF4064 SHYC_RS02575 ec1ee8f850230da5f0903cc6aadca34a 464 PANTHER PTHR40038:SF1 2 437 2.3E-38 T 23-04-2016 SHYC_RS02575 ec1ee8f850230da5f0903cc6aadca34a 464 PANTHER PTHR40038 2 437 2.3E-38 T 23-04-2016 SHYC_RS02575 ec1ee8f850230da5f0903cc6aadca34a 464 PIRSF PIRSF032522 1 463 1.6E-114 T 23-04-2016 IPR023599 Membrane-associated protein TcaA GO:0016021|GO:0046677 SHYC_RS08655 984fd4931eb0581dfbd2ab3f5e67ac01 339 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 328 1.3E-38 T 23-04-2016 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 SHYC_RS10360 5fd24f1249547228556972b34b3cfcb9 238 SUPERFAMILY SSF103473 67 231 9.94E-5 T 23-04-2016 IPR020846 Major facilitator superfamily domain SHYC_RS01750 b2586e166c049fe2aeff0611f3fe11d5 72 Gene3D G3DSA:1.10.150.260 2 66 9.9E-7 T 23-04-2016 IPR023089 YozE SAM-like domain SHYC_RS01750 b2586e166c049fe2aeff0611f3fe11d5 72 Pfam PF06855 YozE SAM-like fold 2 66 2.1E-9 T 23-04-2016 IPR023089 YozE SAM-like domain SHYC_RS01750 b2586e166c049fe2aeff0611f3fe11d5 72 SUPERFAMILY SSF140652 2 68 9.55E-13 T 23-04-2016 IPR023089 YozE SAM-like domain SHYC_RS07215 ed83c999dad86216421d73d0110de550 271 PANTHER PTHR36110 1 270 1.4E-54 T 23-04-2016 SHYC_RS07215 ed83c999dad86216421d73d0110de550 271 PANTHER PTHR36110:SF3 1 270 1.4E-54 T 23-04-2016 SHYC_RS07215 ed83c999dad86216421d73d0110de550 271 Gene3D G3DSA:3.10.180.10 64 199 9.3E-23 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS07215 ed83c999dad86216421d73d0110de550 271 SUPERFAMILY SSF54593 2 119 4.08E-9 T 23-04-2016 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase SHYC_RS10435 ca816a94e8579a31cfd074b5e022e264 239 Pfam PF06738 Putative threonine/serine exporter 1 236 3.1E-63 T 23-04-2016 IPR010619 Putative threonine/serine exporter SHYC_RS10435 ca816a94e8579a31cfd074b5e022e264 239 PANTHER PTHR34390:SF2 1 238 4.9E-45 T 23-04-2016 SHYC_RS10435 ca816a94e8579a31cfd074b5e022e264 239 PANTHER PTHR34390 1 238 4.9E-45 T 23-04-2016 SHYC_RS01900 21a1a49933f34498e682166b6d6e9e78 117 PANTHER PTHR36849:SF1 1 116 1.7E-40 T 23-04-2016 SHYC_RS01900 21a1a49933f34498e682166b6d6e9e78 117 Pfam PF04343 Protein of unknown function, DUF488 5 116 2.7E-30 T 23-04-2016 IPR007438 Protein of unknown function DUF488 SHYC_RS01900 21a1a49933f34498e682166b6d6e9e78 117 PANTHER PTHR36849 1 116 1.7E-40 T 23-04-2016 SHYC_RS01210 7bdde065b6bc8ba74ada126df7956139 459 Pfam PF07670 Nucleoside recognition 142 238 4.1E-10 T 23-04-2016 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: REACT_15518|Reactome: REACT_1698 SHYC_RS01210 7bdde065b6bc8ba74ada126df7956139 459 PANTHER PTHR32089 6 452 2.0E-133 T 23-04-2016 SHYC_RS01210 7bdde065b6bc8ba74ada126df7956139 459 PANTHER PTHR32089:SF32 6 452 2.0E-133 T 23-04-2016 SHYC_RS11045 41fc0cbd12c58f943012dd62fb066202 267 PANTHER PTHR21600:SF3 3 259 9.1E-65 T 23-04-2016 SHYC_RS11045 41fc0cbd12c58f943012dd62fb066202 267 Pfam PF04468 PSP1 C-terminal conserved region 61 146 2.6E-26 T 23-04-2016 IPR007557 PSP1, C-terminal SHYC_RS11045 41fc0cbd12c58f943012dd62fb066202 267 PANTHER PTHR21600 3 259 9.1E-65 T 23-04-2016 SHYC_RS05695 92262ec5273c4cc511f136a96b349626 263 SUPERFAMILY SSF56112 3 225 1.54E-25 T 23-04-2016 IPR011009 Protein kinase-like domain SHYC_RS05695 92262ec5273c4cc511f136a96b349626 263 Pfam PF01636 Phosphotransferase enzyme family 22 211 1.5E-18 T 23-04-2016 IPR002575 Aminoglycoside phosphotransferase SHYC_RS05695 92262ec5273c4cc511f136a96b349626 263 PANTHER PTHR40086 9 262 2.4E-73 T 23-04-2016 SHYC_RS05695 92262ec5273c4cc511f136a96b349626 263 Gene3D G3DSA:3.90.1200.10 125 229 9.7E-13 T 23-04-2016 SHYC_RS01040 d60a756c49845c43516a2802b5d47d2d 226 Pfam PF03744 6-carboxyhexanoate--CoA ligase 2 221 4.3E-63 T 23-04-2016 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578|UniPathway: UPA00999 SHYC_RS01040 d60a756c49845c43516a2802b5d47d2d 226 ProDom PD017229 LIGASE SYNTHASE BIOTIN MAGNESIUM PIMELOYL-COA 6-CARBOXYHEXANOATE--COA BIOSYNTHESIS 6-CARBOXYHEXANOATE-COA BIOW COA 2 198 7.0E-55 T 23-04-2016 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578|UniPathway: UPA00999 SHYC_RS06970 b12653d54a7229fda9cb25374891ec64 195 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 71 181 6.3E-9 T 23-04-2016 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 SHYC_RS11790 fbdcf14b583a61779bb1a53c4d167d18 212 Pfam PF13273 Protein of unknown function (DUF4064) 3 106 3.8E-16 T 23-04-2016 IPR025273 Domain of unknown function DUF4064 SHYC_RS04415 de135e695beaf4dfddb4a3710a818b9e 365 Pfam PF06081 Aromatic acid exporter family member 1 2 144 2.5E-29 T 23-04-2016 IPR010343 Aromatic acid exporter family member 1 SHYC_RS04415 de135e695beaf4dfddb4a3710a818b9e 365 PANTHER PTHR30509 2 287 9.8E-47 T 23-04-2016 SHYC_RS11375 72e965ae696ce639754a1a4af86cccca 275 SUPERFAMILY SSF53335 17 201 2.12E-9 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS11375 72e965ae696ce639754a1a4af86cccca 275 PANTHER PTHR32266 72 237 2.0E-26 T 23-04-2016 SHYC_RS11375 72e965ae696ce639754a1a4af86cccca 275 Gene3D G3DSA:3.40.50.150 101 224 1.0E-10 T 23-04-2016 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase SHYC_RS03565 8f41bbcf148f423a26989c5cad70f336 173 Pfam PF10740 Domain of unknown function (DUF2529) 1 168 2.4E-52 T 23-04-2016 IPR019676 Domain of unknown function (DUF2529) SHYC_RS08495 1e3cd562c6e03f1f0c370ed2439b36b1 153 Pfam PF04238 Protein of unknown function (DUF420) 6 134 4.3E-37 T 23-04-2016 IPR007352 Protein of unknown function DUF420 SHYC_RS08495 1e3cd562c6e03f1f0c370ed2439b36b1 153 PANTHER PTHR37692 1 140 1.9E-48 T 23-04-2016 SHYC_RS08495 1e3cd562c6e03f1f0c370ed2439b36b1 153 Gene3D G3DSA:1.20.120.80 5 137 3.7E-5 T 23-04-2016 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 SHYC_RS08495 1e3cd562c6e03f1f0c370ed2439b36b1 153 SUPERFAMILY SSF81452 5 137 3.92E-5 T 23-04-2016 IPR000298 Cytochrome c oxidase subunit III domain GO:0015002|GO:0016020 SHYC_RS11835 cbb2d4ac3565a0227a25192b3e82ef47 199 Pfam PF07275 Antirestriction protein (ArdA) 9 184 3.5E-30 T 23-04-2016 IPR009899 Antirestriction SHYC_RS03040 95d4800d8eb05439f004673b5ac533e4 286 Pfam PF13673 Acetyltransferase (GNAT) domain 168 282 6.0E-7 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS03040 95d4800d8eb05439f004673b5ac533e4 286 SUPERFAMILY SSF55729 152 280 6.71E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS03040 95d4800d8eb05439f004673b5ac533e4 286 Gene3D G3DSA:3.40.630.30 158 281 4.6E-12 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS00580 b425c63fb40d4248bcfad2f223d7a299 247 Pfam PF04507 Protein of unknown function, DUF576 1 245 1.4E-104 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS00580 b425c63fb40d4248bcfad2f223d7a299 247 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 2 244 2.0E-93 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS11580 e5de7e6576e190185709ea98abe36f37 125 Pfam PF08818 Domain of unknown function (DU1801) 17 112 1.6E-7 T 23-04-2016 IPR014922 Domain of unknown function DUF1801 SHYC_RS11580 e5de7e6576e190185709ea98abe36f37 125 PANTHER PTHR41327 1 124 3.3E-39 T 23-04-2016 SHYC_RS11580 e5de7e6576e190185709ea98abe36f37 125 PANTHER PTHR41327:SF2 1 124 3.3E-39 T 23-04-2016 SHYC_RS11580 e5de7e6576e190185709ea98abe36f37 125 SUPERFAMILY SSF159888 1 124 1.24E-29 T 23-04-2016 SHYC_RS09080 4b4f15d208afcae17a635fd8d1481d47 115 Hamap MF_01861 UPF0738 protein . 1 113 24.495 T 23-04-2016 IPR020908 Uncharacterised protein family UPF0738 SHYC_RS02355 e672aa94df493f5e4c20232d38c66fbe 250 PANTHER PTHR33542 5 249 8.2E-28 T 23-04-2016 SHYC_RS02355 e672aa94df493f5e4c20232d38c66fbe 250 Gene3D G3DSA:3.40.50.1400 4 117 2.5E-18 T 23-04-2016 SHYC_RS02355 e672aa94df493f5e4c20232d38c66fbe 250 Gene3D G3DSA:3.40.50.1400 125 236 3.6E-8 T 23-04-2016 SHYC_RS02355 e672aa94df493f5e4c20232d38c66fbe 250 Pfam PF01903 CbiX 9 111 2.5E-17 T 23-04-2016 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377|UniPathway: UPA00148 SHYC_RS02355 e672aa94df493f5e4c20232d38c66fbe 250 SUPERFAMILY SSF53800 5 236 7.63E-28 T 23-04-2016 SHYC_RS02355 e672aa94df493f5e4c20232d38c66fbe 250 PANTHER PTHR33542:SF2 5 249 8.2E-28 T 23-04-2016 SHYC_RS03690 28f9f3681fa0a7cf5e8feec0a002e58f 77 Pfam PF06612 Protein of unknown function (DUF1146) 18 62 3.8E-16 T 23-04-2016 IPR009526 Protein of unknown function DUF1146 SHYC_RS03690 28f9f3681fa0a7cf5e8feec0a002e58f 77 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 9 76 2.3E-13 T 23-04-2016 IPR009526 Protein of unknown function DUF1146 SHYC_RS02485 c65acdb5f7e518d7a4a917d95fcae24a 412 SUPERFAMILY SSF81296 30 126 3.29E-18 T 23-04-2016 IPR014756 Immunoglobulin E-set SHYC_RS02485 c65acdb5f7e518d7a4a917d95fcae24a 412 Pfam PF04234 CopC domain 31 125 2.6E-18 T 23-04-2016 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 SHYC_RS02485 c65acdb5f7e518d7a4a917d95fcae24a 412 PANTHER PTHR34820 6 405 1.9E-18 T 23-04-2016 SHYC_RS02485 c65acdb5f7e518d7a4a917d95fcae24a 412 Gene3D G3DSA:2.60.40.1220 30 126 5.6E-22 T 23-04-2016 IPR014755 Copper resistance protein CopC/internalin, immunoglobulin-like SHYC_RS05470 ff8ab36483c28f7f338110e937f8aaaf 283 Pfam PF13367 Protease prsW family 84 253 1.3E-18 T 23-04-2016 IPR026898 Protease PrsW GO:0008233 KEGG: 00261+3.4.-.-|KEGG: 00310+3.4.-.-|KEGG: 00550+3.4.-.-|KEGG: 00780+3.4.-.- SHYC_RS01335 1e0fca8b6db4e792f7f753aa3a8269c4 163 SUPERFAMILY SSF53474 36 156 5.11E-12 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS01335 1e0fca8b6db4e792f7f753aa3a8269c4 163 Gene3D G3DSA:3.40.50.1820 41 155 5.5E-7 T 23-04-2016 IPR029058 Alpha/Beta hydrolase fold SHYC_RS11275 7bc0c8559a20f67c08c43e2c7e88a18b 144 TIGRFAM TIGR03927 T7SS_EssA_Firm: type VII secretion protein EssA 5 137 1.1E-21 T 23-04-2016 IPR018920 WXG100 secretion system EssA SHYC_RS11275 7bc0c8559a20f67c08c43e2c7e88a18b 144 Pfam PF10661 WXG100 protein secretion system (Wss), protein EssA 16 103 5.7E-8 T 23-04-2016 IPR018920 WXG100 secretion system EssA SHYC_RS09935 ee82eaaea56245c70abcaaf96b88e33e 85 Pfam PF04226 Transglycosylase associated protein 33 76 1.0E-8 T 23-04-2016 IPR007341 Transglycosylase-associated protein GO:0016021 SHYC_RS07255 2feaa6502277ae360cb562be24c88875 102 Pfam PF06279 Protein of unknown function (DUF1033) 1 93 4.5E-17 T 23-04-2016 IPR010434 Protein of unknown function DUF1033 SHYC_RS11235 d68d3f7361f25dca541af597e5d97f64 151 Pfam PF16895 Domain of unknown function (DUF5085) 7 143 2.2E-29 T 23-04-2016 IPR031664 Protein of unknown function DUF5085 SHYC_RS00065 97a605b90c05b52c82a0ba70db1a560b 98 Pfam PF05800 Gas vesicle synthesis protein GvpO 33 93 3.8E-6 T 23-04-2016 IPR008634 Gas vesicle protein GvpO GO:0031412 SHYC_RS04090 19d3cbfb181bdc5f38f45e4d337e6e28 136 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 87 136 8.1E-12 T 23-04-2016 IPR018691 Protein of unknown function DUF2188 SHYC_RS10400 09ba1193ce98ddc61544f97b95d266d1 168 Pfam PF08741 YwhD family 5 167 3.4E-75 T 23-04-2016 IPR014852 Uncharacterised protein YwhD SHYC_RS09340 2a6f502036c48d6d2c801a49ca3b8f72 78 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 1 73 1.0E-28 T 23-04-2016 SHYC_RS09340 2a6f502036c48d6d2c801a49ca3b8f72 78 Pfam PF07293 Protein of unknown function (DUF1450) 1 74 6.4E-35 T 23-04-2016 IPR009910 Protein of unknown function DUF1450 SHYC_RS09340 2a6f502036c48d6d2c801a49ca3b8f72 78 Hamap MF_01542 UPF0349 protein . 1 77 28.365 T 23-04-2016 IPR022916 Protein of unknown function UPF0349 SHYC_RS10080 fae6d88fa5f1f8789c1f54a1d3411ebe 234 Pfam PF06570 Protein of unknown function (DUF1129) 38 211 4.8E-8 T 23-04-2016 IPR009214 Protein of unknown function DUF1129 SHYC_RS10080 fae6d88fa5f1f8789c1f54a1d3411ebe 234 SUPERFAMILY SSF158560 3 95 7.46E-9 T 23-04-2016 SHYC_RS09590 d26dfede40e7a8e7b9c1019d873c7cea 212 Pfam PF15179 Myc target protein 1 22 160 1.9E-7 T 23-04-2016 IPR029180 Myc target protein 1 SHYC_RS09590 d26dfede40e7a8e7b9c1019d873c7cea 212 Pfam PF16228 Domain of unknown function (DUF4887) 41 208 5.4E-16 T 23-04-2016 IPR032615 Protein of unknown function DUF4887 SHYC_RS11560 3b38fa21b2d9f37c621cc313477fe263 316 Pfam PF06207 Protein of unknown function (DUF1002) 39 266 2.0E-49 T 23-04-2016 IPR009343 Protein of unknown function DUF1002 SHYC_RS06475 3d12b1bac63a4ad7cb6b25dc0d7a590a 332 Pfam PF12127 SigmaW regulon antibacterial 10 321 3.6E-162 T 23-04-2016 IPR022853 Uncharacterised protein family YdfA-immunity SHYC_RS06475 3d12b1bac63a4ad7cb6b25dc0d7a590a 332 Hamap MF_01562 UPF0365 protein . 4 324 47.519 T 23-04-2016 IPR022853 Uncharacterised protein family YdfA-immunity SHYC_RS06475 3d12b1bac63a4ad7cb6b25dc0d7a590a 332 Gene3D G3DSA:1.10.287.40 196 286 2.2E-5 T 23-04-2016 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|UniPathway: UPA00906 SHYC_RS11855 685eb9124fc94bd90f0048fe6fbbca37 70 Pfam PF14657 AP2-like DNA-binding integrase domain 9 47 1.6E-6 T 23-04-2016 IPR028259 AP2-like integrase, N-terminal domain SHYC_RS11105 01083b26ac393b00357c1b51986b7ddd 171 SUPERFAMILY SSF55729 5 133 2.16E-17 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS11105 01083b26ac393b00357c1b51986b7ddd 171 Gene3D G3DSA:3.40.630.30 1 132 3.5E-14 T 23-04-2016 IPR016181 Acyl-CoA N-acyltransferase SHYC_RS11105 01083b26ac393b00357c1b51986b7ddd 171 Pfam PF00583 Acetyltransferase (GNAT) family 52 111 1.4E-7 T 23-04-2016 IPR000182 GNAT domain GO:0008080 SHYC_RS10795 704725c092eede47429cb0dfb7d1893b 641 Pfam PF13515 Fusaric acid resistance protein-like 343 467 2.1E-17 T 23-04-2016 SHYC_RS00180 768e685bf652d8e080c4f8908a4cadf9 445 Pfam PF07435 YycH protein 5 437 2.3E-93 T 23-04-2016 IPR009996 Regulatory protein YycH SHYC_RS05725 db1a18b4d0065a21e857ba26892e5049 286 PIRSF PIRSF012562 1 265 2.1E-127 T 23-04-2016 IPR010838 Protein of unknown unction DUF1444 SHYC_RS05725 db1a18b4d0065a21e857ba26892e5049 286 Pfam PF07285 Protein of unknown function (DUF1444) 1 263 4.6E-122 T 23-04-2016 IPR010838 Protein of unknown unction DUF1444 SHYC_RS05085 97c811df98061e52bd7be2a905b0c2b4 249 Pfam PF15526 Novel toxin 21 178 249 7.2E-31 T 23-04-2016 IPR028190 Novel toxin 21 SHYC_RS00155 ac94f1ff4b33142091b37afd1e3e116d 88 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 6 77 2.0E-12 T 23-04-2016 SHYC_RS00155 ac94f1ff4b33142091b37afd1e3e116d 88 Pfam PF14145 YrhK-like protein 21 75 5.0E-16 T 23-04-2016 IPR025424 YrhK domain SHYC_RS09515 caead74b776de4a0a233e93ad6b8f71d 129 Pfam PF08349 Protein of unknown function (DUF1722) 15 121 8.2E-20 T 23-04-2016 IPR013560 Domain of unknown function DUF1722 SHYC_RS06130 96368d8689c72888f9284ee988f708b8 174 Pfam PF04093 rod shape-determining protein MreD 8 157 4.7E-18 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SHYC_RS06130 96368d8689c72888f9284ee988f708b8 174 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 159 2.3E-19 T 23-04-2016 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 SHYC_RS10305 767d440380d4a0c85f3d285f3eaee15c 160 PANTHER PTHR34584:SF1 1 160 2.1E-34 T 23-04-2016 SHYC_RS10305 767d440380d4a0c85f3d285f3eaee15c 160 PANTHER PTHR34584 1 160 2.1E-34 T 23-04-2016 SHYC_RS10305 767d440380d4a0c85f3d285f3eaee15c 160 Pfam PF01899 Na+/H+ ion antiporter subunit 8 158 2.6E-30 T 23-04-2016 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 SHYC_RS00705 2bdbf0cee89c9964ef8e31a9d6458af5 250 Pfam PF02517 CAAX protease self-immunity 103 198 1.6E-15 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SHYC_RS00705 2bdbf0cee89c9964ef8e31a9d6458af5 250 PANTHER PTHR10794 106 196 4.8E-13 T 23-04-2016 SHYC_RS11230 aacbb3dc6f0809046c7152476adf9bc7 153 Pfam PF16895 Domain of unknown function (DUF5085) 10 150 1.3E-49 T 23-04-2016 IPR031664 Protein of unknown function DUF5085 SHYC_RS00570 b507a7e5350ebfec45cb5e88fb7f2317 254 TIGRFAM TIGR01742 SA_tandem_lipo: Staphylococcus tandem lipoproteins 2 249 7.1E-87 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS00570 b507a7e5350ebfec45cb5e88fb7f2317 254 Pfam PF04507 Protein of unknown function, DUF576 2 251 3.4E-99 T 23-04-2016 IPR007595 Protein of unknown function DUF576 SHYC_RS02835 6b10b549e54930dcd21e48e71036efdc 126 Pfam PF09685 Domain of unknown function (DUF4870) 25 125 3.2E-25 T 23-04-2016 IPR019109 Protein of unknown function DUF4870 SHYC_RS03370 ac4a7f84ddcd7a1d8048efa87a353764 139 Pfam PF17080 Multidrug Resistance efflux pump 2 135 5.3E-59 T 23-04-2016 IPR031396 Multidrug resistance efflux pump SepA SHYC_RS06120 44ef4604c50fe1197b0551c9b659d44a 152 Pfam PF16284 Domain of unknown function (DUF4930) 26 151 3.2E-48 T 23-04-2016 IPR032561 Protein of unknown function DUF4930 SHYC_RS00790 da9e7e0a33a3a59caf83942f6892a014 240 Pfam PF11368 Protein of unknown function (DUF3169) 3 233 2.5E-25 T 23-04-2016 IPR021509 Protein of unknown function DUF3169 SHYC_RS11220 4a58086db1034bc2352dbf52160ccb44 199 Pfam PF16883 Domain of unknown function (DUF5080) 5 194 5.3E-42 T 23-04-2016 IPR031689 Protein of unknown function DUF5080 SHYC_RS04100 edba3b83f36207d0124fca0a14ed9727 187 Pfam PF08006 Protein of unknown function (DUF1700) 1 181 5.7E-47 T 23-04-2016 IPR012963 Protein of unknown function DUF1700 SHYC_RS03495 b17b0ed22eff7891aa2eedfb1459e4c6 141 Pfam PF04134 Protein of unknown function, DUF393 4 111 1.6E-18 T 23-04-2016 IPR007263 Protein of unknown function DUF393 SHYC_RS03495 b17b0ed22eff7891aa2eedfb1459e4c6 141 PANTHER PTHR33639 1 110 2.5E-24 T 23-04-2016 SHYC_RS02860 496bfb25952e2e7727ab4e00633e577b 108 Pfam PF14470 Bacterial PH domain 13 103 3.7E-12 T 23-04-2016 SHYC_RS09150 6054cdbebd694ab8ab1113f193422904 126 Pfam PF13038 Domain of unknown function (DUF3899) 34 123 2.1E-22 T 23-04-2016 IPR025007 Domain of unknown function DUF3899 SHYC_RS01445 7d9b039c0e70a2cda5cbc071113248b3 317 Pfam PF05552 Conserved TM helix 113 159 7.1E-13 T 23-04-2016 IPR008910 Conserved TM helix SHYC_RS01445 7d9b039c0e70a2cda5cbc071113248b3 317 Pfam PF05552 Conserved TM helix 12 54 4.7E-11 T 23-04-2016 IPR008910 Conserved TM helix SHYC_RS08565 e9df32a5329d430ea710d05760f3c3e8 356 Pfam PF13273 Protein of unknown function (DUF4064) 14 125 8.3E-20 T 23-04-2016 IPR025273 Domain of unknown function DUF4064 SHYC_RS08970 8fa302bdb1c88dcba455d6a9aa5e2a03 200 Pfam PF02517 CAAX protease self-immunity 105 190 1.2E-4 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SHYC_RS01015 1769cb1df940c787d7da96d757e0b8b3 152 Pfam PF11457 Protein of unknown function (DUF3021) 1 147 1.7E-30 T 23-04-2016 IPR021560 Protein of unknown function DUF3021 SHYC_RS08680 1d842e467bdcd000b45b7c1077f4aaba 176 Pfam PF05049 Interferon-inducible GTPase (IIGP) 26 128 8.7E-5 T 23-04-2016 IPR007743 Immunity-related GTPases-like GO:0005525|GO:0016020 SHYC_RS02715 bc721abdcb2af55b8de449c4492dbf69 168 SUPERFAMILY SSF55961 5 161 1.36E-31 T 23-04-2016 SHYC_RS02715 bc721abdcb2af55b8de449c4492dbf69 168 Gene3D G3DSA:3.30.530.20 3 162 1.9E-35 T 23-04-2016 IPR023393 START-like domain SHYC_RS02715 bc721abdcb2af55b8de449c4492dbf69 168 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 19 159 9.6E-22 T 23-04-2016 IPR013538 Activator of Hsp90 ATPase homologue 1-like GO:0006950 SHYC_RS05345 22e6fde01e17b46ec72e220b12f5bcf0 179 Pfam PF11667 Putative zincin peptidase 59 163 3.9E-19 T 23-04-2016 IPR021683 Putative zincin peptidase SHYC_RS10130 4416a6b56ae3232da6a82a5c490fb15a 212 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 27 206 2.5E-18 T 23-04-2016 SHYC_RS08415 15081b22d6e17e92a84d7c5555fa8219 173 Pfam PF02674 Colicin V production protein 7 159 5.9E-18 T 23-04-2016 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 SHYC_RS10035 ad80427d60604bcdf65d492b554fe250 215 Pfam PF02517 CAAX protease self-immunity 123 210 2.4E-14 T 23-04-2016 IPR003675 CAAX amino terminal protease GO:0016020 SHYC_RS10070 3e4f93f4faa9c2af53ac7bc0ab00b9b4 99 SUPERFAMILY SSF58100 13 67 4.18E-5 T 23-04-2016 SHYC_RS08560 945b147b54ef59027c47ce05c5f92df9 273 Pfam PF13273 Protein of unknown function (DUF4064) 32 132 5.0E-15 T 23-04-2016 IPR025273 Domain of unknown function DUF4064 SHYC_RS07125 33be9ee04fdc0bd11dbf717f4209a511 61 Pfam PF10782 Zinc-finger 5 61 1.1E-24 T 23-04-2016 IPR019718 Protein of unknown function DUF2602