AL499_RS00010 SM00382 ATPases associated with a variety of cellular activities AL499_RS00100 SM01234 AL499_RS00100 AL499_RS00175 SM00047 Lysozyme subfamily 2 AL499_RS00225 SM00729 Elongator protein 3, MiaB family, Radical SAM AL499_RS00240 SM00450 Rhodanese Homology Domain AL499_RS00255 SM00363 S4 RNA-binding domain AL499_RS00285 SM00849 Metallo-beta-lactamase superfamily AL499_RS00315 SM00843 AL499_RS00315 AL499_RS00335 SM00830 Chorismate mutase type II AL499_RS00340 SM00354 helix_turn _helix lactose operon repressor AL499_RS00350 SM00822 AL499_RS00350 AL499_RS00380 SM00363 S4 RNA-binding domain AL499_RS00390 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL499_RS00395 SM00563 Phosphate acyltransferases AL499_RS00430 SM00363 S4 RNA-binding domain AL499_RS00430 SM01390 AL499_RS00430 AL499_RS00435 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AL499_RS00450 SM00981 AL499_RS00450 AL499_RS00480 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL499_RS00480 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL499_RS00490 SM00849 Metallo-beta-lactamase superfamily AL499_RS00500 SM00116 Domain in cystathionine beta-synthase and other proteins. AL499_RS00510 SM00481 DNA polymerase alpha chain like domain AL499_RS00515 SM00919 Malic enzyme, NAD binding domain AL499_RS00515 SM01274 AL499_RS00515 AL499_RS00540 SM01321 AL499_RS00540 AL499_RS00555 SM01329 AL499_RS00555 AL499_RS00560 SM00448 cheY-homologous receiver domain AL499_RS00560 SM00862 Transcriptional regulatory protein, C terminal AL499_RS00565 SM00387 Histidine kinase-like ATPases AL499_RS00565 SM00388 His Kinase A (phosphoacceptor) domain AL499_RS00570 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL499_RS00570 SM00475 5'-3' exonuclease AL499_RS00570 SM00482 DNA polymerase A domain AL499_RS00575 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AL499_RS00575 SM01232 AL499_RS00575 AL499_RS00585 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL499_RS00590 SM00729 Elongator protein 3, MiaB family, Radical SAM AL499_RS00590 SM00876 Biotin and Thiamin Synthesis associated domain AL499_RS00605 SM00382 ATPases associated with a variety of cellular activities AL499_RS00610 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL499_RS00650 SM00382 ATPases associated with a variety of cellular activities AL499_RS00650 SM00994 ClpX C4-type zinc finger AL499_RS00650 SM01086 C-terminal, D2-small domain, of ClpB protein AL499_RS00680 SM01004 Delta-aminolevulinic acid dehydratase AL499_RS00760 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL499_RS00765 SM00382 ATPases associated with a variety of cellular activities AL499_RS00780 SM01323 AL499_RS00780 AL499_RS00800 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL499_RS00800 SM00954 Region found in RelA / SpoT proteins AL499_RS00810 SM00287 Bacterial SH3 domain homologues AL499_RS00810 SM00646 AL499_RS00810 AL499_RS00835 SM00382 ATPases associated with a variety of cellular activities AL499_RS00860 SM00028 Tetratricopeptide repeats AL499_RS00865 SM00382 ATPases associated with a variety of cellular activities AL499_RS00870 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL499_RS00880 SM00732 Likely ribonuclease with RNase H fold. AL499_RS00915 SM00796 Allophanate hydrolase subunit 1 AL499_RS00920 SM00797 Allophanate hydrolase subunit 2 AL499_RS00930 SM00878 Biotin carboxylase C-terminal domain AL499_RS00965 SM01103 AL499_RS00965 AL499_RS00975 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL499_RS00990 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL499_RS01000 SM00849 Metallo-beta-lactamase superfamily AL499_RS01015 SM00838 Elongation factor G C-terminus AL499_RS01020 SM00729 Elongator protein 3, MiaB family, Radical SAM AL499_RS01040 SM00271 DnaJ molecular chaperone homology domain AL499_RS01055 SM00729 Elongator protein 3, MiaB family, Radical SAM AL499_RS01110 SM00116 Domain in cystathionine beta-synthase and other proteins. AL499_RS01120 SM00400 zinc finger AL499_RS01120 SM00493 AL499_RS01120 AL499_RS01140 SM00487 DEAD-like helicases superfamily AL499_RS01140 SM00490 helicase superfamily c-terminal domain AL499_RS01145 SM00518 AP endonuclease family 2 AL499_RS01150 SM00382 ATPases associated with a variety of cellular activities AL499_RS01185 SM00028 Tetratricopeptide repeats AL499_RS01205 SM00849 Metallo-beta-lactamase superfamily AL499_RS01265 SM00450 Rhodanese Homology Domain AL499_RS01290 SM00841 Elongation factor P, C-terminal AL499_RS01290 SM01185 AL499_RS01290 AL499_RS01300 SM00878 Biotin carboxylase C-terminal domain AL499_RS01355 SM00861 Transketolase, pyrimidine binding domain AL499_RS01375 SM01321 AL499_RS01375 AL499_RS01385 SM01350 AL499_RS01385 AL499_RS01390 SM00354 helix_turn _helix lactose operon repressor AL499_RS01395 SM00642 Alpha-amylase domain AL499_RS01400 SM00342 helix_turn_helix, arabinose operon control protein AL499_RS01400 SM00871 Bacterial transcription activator, effector binding domain AL499_RS01465 SM00363 S4 RNA-binding domain AL499_RS01470 SM00448 cheY-homologous receiver domain AL499_RS01470 SM00862 Transcriptional regulatory protein, C terminal AL499_RS01475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL499_RS01475 SM00387 Histidine kinase-like ATPases AL499_RS01475 SM00388 His Kinase A (phosphoacceptor) domain AL499_RS01495 SM00487 DEAD-like helicases superfamily AL499_RS01495 SM00490 helicase superfamily c-terminal domain AL499_RS01500 SM00257 Lysin motif AL499_RS01515 SM00870 AL499_RS01515 AL499_RS01525 SM00316 Ribosomal protein S1-like RNA-binding domain AL499_RS01540 SM00411 bacterial (prokaryotic) histone like domain AL499_RS01560 SM00562 AL499_RS01560 AL499_RS01620 SM00479 AL499_RS01620 AL499_RS01620 SM00491 AL499_RS01620 AL499_RS01635 SM00478 endonuclease III AL499_RS01635 SM00525 AL499_RS01635 AL499_RS01675 SM00981 AL499_RS01675 AL499_RS01690 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AL499_RS01690 SM00475 5'-3' exonuclease AL499_RS01765 SM00382 ATPases associated with a variety of cellular activities AL499_RS01790 SM00382 ATPases associated with a variety of cellular activities AL499_RS01800 SM00859 Semialdehyde dehydrogenase, NAD binding domain AL499_RS01805 SM01130 AL499_RS01805 AL499_RS01825 SM01005 Alanine racemase, C-terminal domain AL499_RS01845 SM00357 Cold shock protein domain AL499_RS01875 SM00327 von Willebrand factor (vWF) type A domain AL499_RS01900 SM00861 Transketolase, pyrimidine binding domain AL499_RS01905 SM00387 Histidine kinase-like ATPases AL499_RS01905 SM00388 His Kinase A (phosphoacceptor) domain AL499_RS01910 SM00448 cheY-homologous receiver domain AL499_RS01910 SM00862 Transcriptional regulatory protein, C terminal AL499_RS01915 SM00014 Acid phosphatase homologues AL499_RS01930 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL499_RS01930 SM00245 tail specific protease AL499_RS01975 SM00932 Scaffold protein Nfu/NifU N terminal AL499_RS02015 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL499_RS02025 SM01007 Class II Aldolase and Adducin N-terminal domain AL499_RS02095 SM00434 DNA Topoisomerase IV AL499_RS02100 SM00387 Histidine kinase-like ATPases AL499_RS02100 SM00433 TopoisomeraseII AL499_RS02105 SM01207 AL499_RS02105 AL499_RS02155 SM00861 Transketolase, pyrimidine binding domain AL499_RS02180 SM01240 AL499_RS02180 AL499_RS02195 SM01060 AL499_RS02195 AL499_RS02245 SM00318 Staphylococcal nuclease homologues AL499_RS02260 SM00421 helix_turn_helix, Lux Regulon AL499_RS02260 SM00448 cheY-homologous receiver domain AL499_RS02275 SM00382 ATPases associated with a variety of cellular activities AL499_RS02280 SM00155 Phospholipase D. Active site motifs. AL499_RS02290 SM01230 AL499_RS02290 AL499_RS02295 SM00422 helix_turn_helix, mercury resistance AL499_RS02350 SM00853 MutL C terminal dimerisation domain AL499_RS02350 SM01340 AL499_RS02350 AL499_RS02355 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AL499_RS02355 SM00534 ATPase domain of DNA mismatch repair MUTS family AL499_RS02370 SM00729 Elongator protein 3, MiaB family, Radical SAM AL499_RS02405 SM00322 K homology RNA-binding domain AL499_RS02405 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL499_RS02410 SM00382 ATPases associated with a variety of cellular activities AL499_RS02415 SM00852 Probable molybdopterin binding domain AL499_RS02425 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS02450 SM00866 AL499_RS02450 AL499_RS02455 SM00382 ATPases associated with a variety of cellular activities AL499_RS02455 SM00843 AL499_RS02455 AL499_RS02460 SM00849 Metallo-beta-lactamase superfamily AL499_RS02465 SM00316 Ribosomal protein S1-like RNA-binding domain AL499_RS02465 SM00322 K homology RNA-binding domain AL499_RS02470 SM01387 AL499_RS02470 AL499_RS02475 SM00904 Riboflavin kinase AL499_RS02505 SM00316 Ribosomal protein S1-like RNA-binding domain AL499_RS02505 SM00322 K homology RNA-binding domain AL499_RS02515 SM00479 AL499_RS02515 AL499_RS02515 SM00481 DNA polymerase alpha chain like domain AL499_RS02570 SM00382 ATPases associated with a variety of cellular activities AL499_RS02570 SM01086 C-terminal, D2-small domain, of ClpB protein AL499_RS02590 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL499_RS02590 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL499_RS02590 SM00493 AL499_RS02590 AL499_RS02605 SM00881 CoA binding domain AL499_RS02675 SM01321 AL499_RS02675 AL499_RS02680 SM00382 ATPases associated with a variety of cellular activities AL499_RS02680 SM00962 SRP54-type protein, GTPase domain AL499_RS02680 SM00963 SRP54-type protein, helical bundle domain AL499_RS02690 SM00382 ATPases associated with a variety of cellular activities AL499_RS02690 SM00962 SRP54-type protein, GTPase domain AL499_RS02690 SM00963 SRP54-type protein, helical bundle domain AL499_RS02695 SM00968 SMC proteins Flexible Hinge Domain AL499_RS02700 SM00358 Double-stranded RNA binding motif AL499_RS02700 SM00535 Ribonuclease III family AL499_RS02710 SM00822 AL499_RS02710 AL499_RS02715 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AL499_RS02730 SM00487 DEAD-like helicases superfamily AL499_RS02730 SM00490 helicase superfamily c-terminal domain AL499_RS02735 SM01120 AL499_RS02735 AL499_RS02735 SM01121 AL499_RS02735 AL499_RS02750 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AL499_RS02765 SM00220 Serine/Threonine protein kinases, catalytic domain AL499_RS02765 SM00740 AL499_RS02765 AL499_RS02770 SM00331 Sigma factor PP2C-like phosphatases AL499_RS02770 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AL499_RS02795 SM00487 DEAD-like helicases superfamily AL499_RS02795 SM00490 helicase superfamily c-terminal domain AL499_RS02805 SM01409 AL499_RS02805 AL499_RS02810 SM00072 Guanylate kinase homologues. AL499_RS02835 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL499_RS02840 SM00851 MGS-like domain AL499_RS02840 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AL499_RS02840 SM01209 AL499_RS02840 AL499_RS02845 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AL499_RS02870 SM00363 S4 RNA-binding domain AL499_RS02895 SM00363 S4 RNA-binding domain AL499_RS02920 SM00864 Tubulin/FtsZ family, GTPase domain AL499_RS02920 SM00865 Tubulin/FtsZ family, C-terminal domain AL499_RS02925 SM00842 Cell division protein FtsA AL499_RS02945 SM00740 AL499_RS02945 AL499_RS03015 SM00465 GIY-YIG type nucleases (URI domain) AL499_RS03025 SM00463 Small MutS-related domain AL499_RS03025 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AL499_RS03025 SM00534 ATPase domain of DNA mismatch repair MUTS family AL499_RS03030 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL499_RS03030 SM00481 DNA polymerase alpha chain like domain AL499_RS03030 SM00483 DNA polymerase X family AL499_RS03055 SM00873 B3/4 domain AL499_RS03055 SM00874 tRNA synthetase B5 domain AL499_RS03055 SM00896 Ferredoxin-fold anticodon binding domain AL499_RS03065 SM00967 RNA 2'-O ribose methyltransferase substrate binding AL499_RS03135 SM00878 Biotin carboxylase C-terminal domain AL499_RS03160 SM00838 Elongation factor G C-terminus AL499_RS03210 SM00382 ATPases associated with a variety of cellular activities AL499_RS03215 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS03235 SM00861 Transketolase, pyrimidine binding domain AL499_RS03260 SM00849 Metallo-beta-lactamase superfamily AL499_RS03315 SM00382 ATPases associated with a variety of cellular activities AL499_RS03325 SM01209 AL499_RS03325 AL499_RS03325 SM01210 AL499_RS03325 AL499_RS03330 SM00798 AICARFT/IMPCHase bienzyme AL499_RS03330 SM00851 MGS-like domain AL499_RS03355 SM01211 AL499_RS03355 AL499_RS03375 SM01001 AIR carboxylase AL499_RS03440 SM00047 Lysozyme subfamily 2 AL499_RS03440 SM00644 AL499_RS03440 AL499_RS03445 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS03545 SM00914 AL499_RS03545 AL499_RS03575 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AL499_RS03615 SM00422 helix_turn_helix, mercury resistance AL499_RS03645 SM00116 Domain in cystathionine beta-synthase and other proteins. AL499_RS03645 SM00924 MgtE intracellular N domain AL499_RS03660 SM00954 Region found in RelA / SpoT proteins AL499_RS03670 SM01118 AL499_RS03670 AL499_RS03720 SM00382 ATPases associated with a variety of cellular activities AL499_RS03725 SM00382 ATPases associated with a variety of cellular activities AL499_RS03745 SM00825 Beta-ketoacyl synthase AL499_RS03760 SM00382 ATPases associated with a variety of cellular activities AL499_RS03760 SM01086 C-terminal, D2-small domain, of ClpB protein AL499_RS03845 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AL499_RS03855 SM00316 Ribosomal protein S1-like RNA-binding domain AL499_RS03865 SM01298 AL499_RS03865 AL499_RS03935 SM00382 ATPases associated with a variety of cellular activities AL499_RS03940 SM00382 ATPases associated with a variety of cellular activities AL499_RS03945 SM00382 ATPases associated with a variety of cellular activities AL499_RS03975 SM00823 Phosphopantetheine attachment site AL499_RS04070 SM00729 Elongator protein 3, MiaB family, Radical SAM AL499_RS04290 SM00382 ATPases associated with a variety of cellular activities AL499_RS04320 SM00382 ATPases associated with a variety of cellular activities AL499_RS04320 SM00930 AL499_RS04320 AL499_RS04330 SM00493 AL499_RS04330 AL499_RS04370 SM00855 Phosphoglycerate mutase family AL499_RS04480 SM00450 Rhodanese Homology Domain AL499_RS04485 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS04510 SM00316 Ribosomal protein S1-like RNA-binding domain AL499_RS04510 SM00357 Cold shock protein domain AL499_RS04510 SM00955 AL499_RS04510 AL499_RS04530 SM01192 AL499_RS04530 AL499_RS04530 SM01193 AL499_RS04530 AL499_RS04550 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AL499_RS04625 SM00487 DEAD-like helicases superfamily AL499_RS04625 SM00490 helicase superfamily c-terminal domain AL499_RS04640 SM00257 Lysin motif AL499_RS04645 SM00937 AL499_RS04645 AL499_RS04650 SM00957 SecA DEAD-like domain AL499_RS04650 SM00958 SecA preprotein cross-linking domain AL499_RS04655 SM00644 AL499_RS04655 AL499_RS04670 SM00487 DEAD-like helicases superfamily AL499_RS04670 SM00490 helicase superfamily c-terminal domain AL499_RS04690 SM00267 diguanylate cyclase AL499_RS04750 SM00382 ATPases associated with a variety of cellular activities AL499_RS04770 SM00382 ATPases associated with a variety of cellular activities AL499_RS04815 SM00046 Diacylglycerol kinase catalytic domain (presumed) AL499_RS04840 SM00382 ATPases associated with a variety of cellular activities AL499_RS04845 SM00341 Helicase and RNase D C-terminal AL499_RS04845 SM00487 DEAD-like helicases superfamily AL499_RS04845 SM00490 helicase superfamily c-terminal domain AL499_RS04845 SM00956 AL499_RS04845 AL499_RS04850 SM00382 ATPases associated with a variety of cellular activities AL499_RS04860 SM01321 AL499_RS04860 AL499_RS04870 SM00797 Allophanate hydrolase subunit 2 AL499_RS04875 SM00796 Allophanate hydrolase subunit 1 AL499_RS04925 SM01091 Transporter associated domain AL499_RS04940 SM00420 helix_turn_helix, Deoxyribose operon repressor AL499_RS04940 SM01134 AL499_RS04940 AL499_RS04990 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL499_RS04995 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS05080 SM00342 helix_turn_helix, arabinose operon control protein AL499_RS05090 SM00257 Lysin motif AL499_RS05110 SM00382 ATPases associated with a variety of cellular activities AL499_RS05115 SM00387 Histidine kinase-like ATPases AL499_RS05120 SM00448 cheY-homologous receiver domain AL499_RS05120 SM00862 Transcriptional regulatory protein, C terminal AL499_RS05165 SM00382 ATPases associated with a variety of cellular activities AL499_RS05200 SM00382 ATPases associated with a variety of cellular activities AL499_RS05235 SM00382 ATPases associated with a variety of cellular activities AL499_RS05260 SM00529 Helix-turn-helix diphteria tox regulatory element AL499_RS05260 SM00899 AL499_RS05260 AL499_RS05265 SM00382 ATPases associated with a variety of cellular activities AL499_RS05390 SM00422 helix_turn_helix, mercury resistance AL499_RS05395 SM00478 endonuclease III AL499_RS05400 SM00836 DALR anticodon binding domain AL499_RS05400 SM01016 Arginyl tRNA synthetase N terminal dom AL499_RS05420 SM00829 Enoylreductase AL499_RS05430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL499_RS05530 SM00986 Uracil DNA glycosylase superfamily AL499_RS05530 SM00987 UreE urease accessory protein, C-terminal domain AL499_RS05565 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AL499_RS05635 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AL499_RS05635 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AL499_RS05695 SM00838 Elongation factor G C-terminus AL499_RS05695 SM00889 Elongation factor G, domain IV AL499_RS05715 SM00663 RNA polymerase I subunit A N-terminus AL499_RS05745 SM00649 Ribosomal protein L11/L12 AL499_RS05750 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AL499_RS05750 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL499_RS05770 SM00967 RNA 2'-O ribose methyltransferase substrate binding AL499_RS05775 SM00535 Ribonuclease III family AL499_RS05780 SM00840 AL499_RS05780 AL499_RS05795 SM00670 Large family of predicted nucleotide-binding domains AL499_RS05800 SM00382 ATPases associated with a variety of cellular activities AL499_RS05805 SM00382 ATPases associated with a variety of cellular activities AL499_RS05805 SM01086 C-terminal, D2-small domain, of ClpB protein AL499_RS05840 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL499_RS05935 SM00905 Dihydroneopterin aldolase AL499_RS05955 SM00382 ATPases associated with a variety of cellular activities AL499_RS05965 SM00977 TilS substrate C-terminal domain AL499_RS05970 SM00316 Ribosomal protein S1-like RNA-binding domain AL499_RS05980 SM00363 S4 RNA-binding domain AL499_RS05995 SM00487 DEAD-like helicases superfamily AL499_RS05995 SM00490 helicase superfamily c-terminal domain AL499_RS05995 SM00982 AL499_RS05995 AL499_RS05995 SM01058 CarD-like/TRCF domain AL499_RS06010 SM01400 AL499_RS06010 AL499_RS06045 SM00650 Ribosomal RNA adenine dimethylases AL499_RS06050 SM00493 AL499_RS06050 AL499_RS06070 SM00465 GIY-YIG type nucleases (URI domain) AL499_RS06140 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL499_RS06140 SM00493 AL499_RS06140 AL499_RS06150 SM00382 ATPases associated with a variety of cellular activities AL499_RS06165 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL499_RS06165 SM00866 AL499_RS06165 AL499_RS06170 SM00642 Alpha-amylase domain AL499_RS06220 SM00257 Lysin motif AL499_RS06235 SM00382 ATPases associated with a variety of cellular activities AL499_RS06235 SM00930 AL499_RS06235 AL499_RS06240 SM00382 ATPases associated with a variety of cellular activities AL499_RS06245 SM00382 ATPases associated with a variety of cellular activities AL499_RS06280 SM00014 Acid phosphatase homologues AL499_RS06305 SM00833 Cobalamin synthesis protein cobW C-terminal domain AL499_RS06310 SM00849 Metallo-beta-lactamase superfamily AL499_RS06315 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS06330 SM00116 Domain in cystathionine beta-synthase and other proteins. AL499_RS06330 SM01240 AL499_RS06330 AL499_RS06395 SM00855 Phosphoglycerate mutase family AL499_RS06420 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL499_RS06470 SM00942 Primase C terminal 1 (PriCT-1) AL499_RS06490 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS06495 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS06550 SM00470 ParB-like nuclease domain AL499_RS06600 SM00382 ATPases associated with a variety of cellular activities AL499_RS06620 SM00387 Histidine kinase-like ATPases AL499_RS06620 SM00388 His Kinase A (phosphoacceptor) domain AL499_RS06630 SM00382 ATPases associated with a variety of cellular activities AL499_RS06635 SM00448 cheY-homologous receiver domain AL499_RS06635 SM00862 Transcriptional regulatory protein, C terminal AL499_RS06645 SM00640 Glycosyl hydrolases family 32 AL499_RS06650 SM00354 helix_turn _helix lactose operon repressor AL499_RS06685 SM00382 ATPases associated with a variety of cellular activities AL499_RS06700 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS06705 SM00062 Bacterial periplasmic substrate-binding proteins AL499_RS06725 SM00829 Enoylreductase AL499_RS06745 SM00470 ParB-like nuclease domain AL499_RS06755 SM01228 AL499_RS06755 AL499_RS06775 SM00382 ATPases associated with a variety of cellular activities AL499_RS06775 SM00760 Bacterial dnaA protein helix-turn-helix domain AL499_RS06780 SM00480 DNA polymerase III beta subunit AL499_RS06795 SM00387 Histidine kinase-like ATPases AL499_RS06795 SM00433 TopoisomeraseII AL499_RS06800 SM00434 DNA Topoisomerase IV AL499_RS06835 SM00267 diguanylate cyclase AL499_RS06850 SM00788 Adenylosuccinate synthetase AL499_RS06865 SM00448 cheY-homologous receiver domain AL499_RS06865 SM00862 Transcriptional regulatory protein, C terminal AL499_RS06870 SM00091 PAS domain AL499_RS06870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL499_RS06870 SM00387 Histidine kinase-like ATPases AL499_RS06870 SM00388 His Kinase A (phosphoacceptor) domain AL499_RS06910 SM00849 Metallo-beta-lactamase superfamily AL499_RS06925 SM00344 helix_turn_helix ASNC type AL499_RS06965 SM00382 ATPases associated with a variety of cellular activities AL499_RS07000 SM00387 Histidine kinase-like ATPases AL499_RS07005 SM00448 cheY-homologous receiver domain AL499_RS07005 SM00862 Transcriptional regulatory protein, C terminal AL499_RS07020 SM00382 ATPases associated with a variety of cellular activities AL499_RS07035 SM00823 Phosphopantetheine attachment site AL499_RS07080 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL499_RS07080 SM00866 AL499_RS07080 AL499_RS07090 SM01133 AL499_RS07090 AL499_RS07120 SM00448 cheY-homologous receiver domain AL499_RS07120 SM00862 Transcriptional regulatory protein, C terminal AL499_RS07125 SM00387 Histidine kinase-like ATPases AL499_RS07125 SM00388 His Kinase A (phosphoacceptor) domain AL499_RS07150 SM00725 NEAr Transporter domain AL499_RS07165 SM00382 ATPases associated with a variety of cellular activities AL499_RS07170 SM00725 NEAr Transporter domain AL499_RS07175 SM00725 NEAr Transporter domain AL499_RS07180 SM00725 NEAr Transporter domain AL499_RS07195 SM00382 ATPases associated with a variety of cellular activities AL499_RS07210 SM00047 Lysozyme subfamily 2 AL499_RS07240 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS07255 SM00382 ATPases associated with a variety of cellular activities AL499_RS07285 SM00420 helix_turn_helix, Deoxyribose operon repressor AL499_RS07285 SM01134 AL499_RS07285 AL499_RS07290 SM00855 Phosphoglycerate mutase family AL499_RS07295 SM00387 Histidine kinase-like ATPases AL499_RS07295 SM00388 His Kinase A (phosphoacceptor) domain AL499_RS07300 SM00448 cheY-homologous receiver domain AL499_RS07300 SM00862 Transcriptional regulatory protein, C terminal AL499_RS07335 SM00382 ATPases associated with a variety of cellular activities AL499_RS07355 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AL499_RS07375 SM00382 ATPases associated with a variety of cellular activities AL499_RS07410 SM00382 ATPases associated with a variety of cellular activities AL499_RS07415 SM00382 ATPases associated with a variety of cellular activities AL499_RS07515 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL499_RS07525 SM00382 ATPases associated with a variety of cellular activities AL499_RS07545 SM00357 Cold shock protein domain AL499_RS07555 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain AL499_RS07610 SM00382 ATPases associated with a variety of cellular activities AL499_RS07655 SM00382 ATPases associated with a variety of cellular activities AL499_RS07660 SM00382 ATPases associated with a variety of cellular activities AL499_RS07670 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS07680 SM00382 ATPases associated with a variety of cellular activities AL499_RS07690 SM00867 YceI-like domain AL499_RS07765 SM00900 AL499_RS07765 AL499_RS07800 SM00861 Transketolase, pyrimidine binding domain AL499_RS07860 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS07885 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS07925 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS07945 SM00506 Appr-1"-p processing enzyme AL499_RS08005 SM01130 AL499_RS08005 AL499_RS08095 SM00450 Rhodanese Homology Domain AL499_RS08125 SM00382 ATPases associated with a variety of cellular activities AL499_RS08135 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS08165 SM00047 Lysozyme subfamily 2 AL499_RS08235 SM00854 Bacterial capsule synthesis protein PGA_cap AL499_RS08320 SM00984 UDP binding domain AL499_RS08330 SM00098 Alkaline phosphatase homologues AL499_RS08340 SM00448 cheY-homologous receiver domain AL499_RS08340 SM00862 Transcriptional regulatory protein, C terminal AL499_RS08345 SM00387 Histidine kinase-like ATPases AL499_RS08350 SM00382 ATPases associated with a variety of cellular activities AL499_RS08515 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL499_RS08515 SM00866 AL499_RS08515 AL499_RS08765 SM01266 AL499_RS08765 AL499_RS08830 SM00382 ATPases associated with a variety of cellular activities AL499_RS08885 SM00829 Enoylreductase AL499_RS08925 SM00854 Bacterial capsule synthesis protein PGA_cap AL499_RS08965 SM01208 AL499_RS08965 AL499_RS09015 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS09100 SM00954 Region found in RelA / SpoT proteins AL499_RS09115 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL499_RS09115 SM00895 AL499_RS09115 AL499_RS09215 SM00382 ATPases associated with a variety of cellular activities AL499_RS09220 SM00062 Bacterial periplasmic substrate-binding proteins AL499_RS09250 SM00382 ATPases associated with a variety of cellular activities AL499_RS09260 SM00387 Histidine kinase-like ATPases AL499_RS09260 SM00388 His Kinase A (phosphoacceptor) domain AL499_RS09265 SM00448 cheY-homologous receiver domain AL499_RS09265 SM00862 Transcriptional regulatory protein, C terminal AL499_RS09290 SM00829 Enoylreductase AL499_RS09295 SM00116 Domain in cystathionine beta-synthase and other proteins. AL499_RS09295 SM00382 ATPases associated with a variety of cellular activities AL499_RS09355 SM00448 cheY-homologous receiver domain AL499_RS09355 SM00850 LytTr DNA-binding domain AL499_RS09360 SM00387 Histidine kinase-like ATPases AL499_RS09425 SM00871 Bacterial transcription activator, effector binding domain AL499_RS09460 SM00855 Phosphoglycerate mutase family AL499_RS09470 SM00062 Bacterial periplasmic substrate-binding proteins AL499_RS09470 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL499_RS09480 SM00382 ATPases associated with a variety of cellular activities AL499_RS09520 SM00382 ATPases associated with a variety of cellular activities AL499_RS09555 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL499_RS09580 SM00387 Histidine kinase-like ATPases AL499_RS09585 SM00421 helix_turn_helix, Lux Regulon AL499_RS09585 SM00448 cheY-homologous receiver domain AL499_RS09595 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS09630 SM00342 helix_turn_helix, arabinose operon control protein AL499_RS09660 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS09675 SM00382 ATPases associated with a variety of cellular activities AL499_RS09680 SM00382 ATPases associated with a variety of cellular activities AL499_RS09715 SM00988 UreE urease accessory protein, N-terminal domain AL499_RS09820 SM00894 Excalibur calcium-binding domain AL499_RS09835 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS09865 SM00829 Enoylreductase AL499_RS09930 SM00850 LytTr DNA-binding domain AL499_RS09935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AL499_RS09935 SM00387 Histidine kinase-like ATPases AL499_RS09935 SM00388 His Kinase A (phosphoacceptor) domain AL499_RS09940 SM00448 cheY-homologous receiver domain AL499_RS09940 SM00862 Transcriptional regulatory protein, C terminal AL499_RS09950 SM00382 ATPases associated with a variety of cellular activities AL499_RS09960 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS10025 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS10130 SM00420 helix_turn_helix, Deoxyribose operon repressor AL499_RS10145 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AL499_RS10145 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AL499_RS10160 SM00047 Lysozyme subfamily 2 AL499_RS10210 SM00342 helix_turn_helix, arabinose operon control protein AL499_RS10215 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS10230 SM00382 ATPases associated with a variety of cellular activities AL499_RS10230 SM01086 C-terminal, D2-small domain, of ClpB protein AL499_RS10275 SM00382 ATPases associated with a variety of cellular activities AL499_RS10285 SM00852 Probable molybdopterin binding domain AL499_RS10295 SM00852 Probable molybdopterin binding domain AL499_RS10320 SM00729 Elongator protein 3, MiaB family, Radical SAM AL499_RS10335 SM00347 helix_turn_helix multiple antibiotic resistance protein AL499_RS10370 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AL499_RS10370 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AL499_RS10370 SM00493 AL499_RS10370 AL499_RS10385 SM01403 AL499_RS10385 AL499_RS10405 SM01382 AL499_RS10405 AL499_RS10405 SM01383 AL499_RS10405 AL499_RS10420 SM00322 K homology RNA-binding domain AL499_RS10440 SM01374 AL499_RS10440 AL499_RS10445 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AL499_RS10500 SM00316 Ribosomal protein S1-like RNA-binding domain AL499_RS10520 SM00662 RNA polymerases D AL499_RS10530 SM00382 ATPases associated with a variety of cellular activities AL499_RS10535 SM00382 ATPases associated with a variety of cellular activities AL499_RS10570 SM00382 ATPases associated with a variety of cellular activities AL499_RS10580 SM00382 ATPases associated with a variety of cellular activities AL499_RS10635 SM00420 helix_turn_helix, Deoxyribose operon repressor AL499_RS10635 SM01134 AL499_RS10635 AL499_RS10655 SM01133 AL499_RS10655 AL499_RS10680 SM00829 Enoylreductase AL499_RS10685 SM00829 Enoylreductase AL499_RS10860 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AL499_RS10900 SM01133 AL499_RS10900 AL499_RS10905 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AL499_RS10920 SM00899 AL499_RS10920 AL499_RS10995 SM00357 Cold shock protein domain AL499_RS10995 SM00382 ATPases associated with a variety of cellular activities AL499_RS10995 SM00959 Rho termination factor, N-terminal domain AL499_RS11010 SM00937 AL499_RS11010 AL499_RS11025 SM00226 Low molecular weight phosphatase family AL499_RS11080 SM00382 ATPases associated with a variety of cellular activities AL499_RS11105 SM01321 AL499_RS11105 AL499_RS11110 SM00342 helix_turn_helix, arabinose operon control protein AL499_RS11115 SM00382 ATPases associated with a variety of cellular activities AL499_RS11165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AL499_RS11170 SM00155 Phospholipase D. Active site motifs. AL499_RS11200 SM00487 DEAD-like helicases superfamily AL499_RS11200 SM00490 helicase superfamily c-terminal domain AL499_RS11225 SM01005 Alanine racemase, C-terminal domain AL499_RS11240 SM00331 Sigma factor PP2C-like phosphatases AL499_RS11240 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AL499_RS11260 SM00316 Ribosomal protein S1-like RNA-binding domain AL499_RS11260 SM00732 Likely ribonuclease with RNase H fold. AL499_RS11265 SM00731 SprT homologues. AL499_RS11315 SM01329 AL499_RS11315 AL499_RS11320 SM00917 LeuA allosteric (dimerisation) domain AL499_RS11365 SM00534 ATPase domain of DNA mismatch repair MUTS family AL499_RS11370 SM00382 ATPases associated with a variety of cellular activities AL499_RS11375 SM00881 CoA binding domain AL499_RS11400 SM00354 helix_turn _helix lactose operon repressor AL499_RS11405 SM00640 Glycosyl hydrolases family 32 AL499_RS11415 SM00448 cheY-homologous receiver domain AL499_RS11415 SM00850 LytTr DNA-binding domain AL499_RS11425 SM00794 Staphylococcal AgrD protein AL499_RS11430 SM00793 Accessory gene regulator B AL499_RS11455 SM00883 Chaperonin 10 Kd subunit AL499_RS11470 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS11475 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS11500 SM00942 Primase C terminal 1 (PriCT-1) AL499_RS11575 SM00345 helix_turn_helix gluconate operon transcriptional repressor AL499_RS11580 SM00382 ATPases associated with a variety of cellular activities AL499_RS11590 SM00382 ATPases associated with a variety of cellular activities AL499_RS11635 SM01131 AL499_RS11635 AL499_RS11645 SM00710 Parallel beta-helix repeats AL499_RS11690 SM00998 Adenylosuccinate lyase C-terminus AL499_RS11710 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AL499_RS11710 SM00292 breast cancer carboxy-terminal domain AL499_RS11710 SM00532 Ligase N family AL499_RS11740 SM00845 GatB domain AL499_RS11745 SM00046 Diacylglycerol kinase catalytic domain (presumed) AL499_RS11770 SM00479 AL499_RS11770 AL499_RS11820 SM00387 Histidine kinase-like ATPases AL499_RS11825 SM00421 helix_turn_helix, Lux Regulon AL499_RS11825 SM00448 cheY-homologous receiver domain AL499_RS11840 SM00226 Low molecular weight phosphatase family AL499_RS11900 SM00478 endonuclease III AL499_RS11900 SM00525 AL499_RS11900 AL499_RS11910 SM00382 ATPases associated with a variety of cellular activities AL499_RS12100 SM00062 Bacterial periplasmic substrate-binding proteins AL499_RS12100 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AL499_RS12105 SM00382 ATPases associated with a variety of cellular activities AL499_RS12140 SM00387 Histidine kinase-like ATPases AL499_RS12145 SM00421 helix_turn_helix, Lux Regulon AL499_RS12145 SM00448 cheY-homologous receiver domain AL499_RS12150 SM00530 Helix-turn-helix XRE-family like proteins AL499_RS12175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif.