A6J61_RS00035	SM00854	Bacterial capsule synthesis protein PGA_cap
A6J61_RS00125	SM00984	UDP binding domain
A6J61_RS00135	SM00098	Alkaline phosphatase homologues
A6J61_RS00145	SM00448	cheY-homologous receiver domain
A6J61_RS00145	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS00150	SM00387	Histidine kinase-like ATPases
A6J61_RS00155	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS00335	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J61_RS00335	SM00866	A6J61_RS00335
A6J61_RS00585	SM01266	A6J61_RS00585
A6J61_RS00650	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS00705	SM00829	Enoylreductase
A6J61_RS00750	SM00854	Bacterial capsule synthesis protein PGA_cap
A6J61_RS00790	SM01208	A6J61_RS00790
A6J61_RS00860	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS00960	SM00954	Region found in RelA / SpoT proteins
A6J61_RS00970	SM00422	helix_turn_helix, mercury resistance
A6J61_RS00975	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J61_RS00975	SM00895	A6J61_RS00975
A6J61_RS01015	SM00927	DNA mismatch repair enzyme MutH
A6J61_RS01095	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS01100	SM00062	Bacterial periplasmic substrate-binding proteins
A6J61_RS01130	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS01140	SM00387	Histidine kinase-like ATPases
A6J61_RS01140	SM00388	His Kinase A (phosphoacceptor) domain
A6J61_RS01145	SM00448	cheY-homologous receiver domain
A6J61_RS01145	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS01170	SM00829	Enoylreductase
A6J61_RS01175	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J61_RS01175	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS01230	SM00448	cheY-homologous receiver domain
A6J61_RS01230	SM00850	LytTr DNA-binding domain
A6J61_RS01235	SM00387	Histidine kinase-like ATPases
A6J61_RS01305	SM00871	Bacterial transcription activator, effector binding domain
A6J61_RS01340	SM00855	Phosphoglycerate mutase family
A6J61_RS01355	SM00062	Bacterial periplasmic substrate-binding proteins
A6J61_RS01355	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J61_RS01365	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS01405	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS01440	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A6J61_RS01465	SM00387	Histidine kinase-like ATPases
A6J61_RS01470	SM00421	helix_turn_helix, Lux Regulon
A6J61_RS01470	SM00448	cheY-homologous receiver domain
A6J61_RS01480	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS01510	SM00342	helix_turn_helix, arabinose operon control protein
A6J61_RS01540	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS01555	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS01560	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS01595	SM00988	UreE urease accessory protein, N-terminal domain
A6J61_RS01655	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS01700	SM00894	Excalibur calcium-binding domain
A6J61_RS01715	SM00530	Helix-turn-helix XRE-family like proteins 
A6J61_RS01725	SM00530	Helix-turn-helix XRE-family like proteins 
A6J61_RS01745	SM00829	Enoylreductase
A6J61_RS01810	SM00850	LytTr DNA-binding domain
A6J61_RS01815	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J61_RS01815	SM00387	Histidine kinase-like ATPases
A6J61_RS01815	SM00388	His Kinase A (phosphoacceptor) domain
A6J61_RS01820	SM00448	cheY-homologous receiver domain
A6J61_RS01820	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS01830	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS01905	SM00530	Helix-turn-helix XRE-family like proteins 
A6J61_RS02020	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J61_RS02035	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
A6J61_RS02035	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
A6J61_RS02050	SM00047	Lysozyme subfamily 2
A6J61_RS02095	SM00342	helix_turn_helix, arabinose operon control protein
A6J61_RS02100	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS02115	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS02115	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J61_RS02160	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS02170	SM00852	Probable molybdopterin binding domain
A6J61_RS02180	SM00852	Probable molybdopterin binding domain
A6J61_RS02205	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J61_RS02220	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS02255	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6J61_RS02255	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6J61_RS02255	SM00493	A6J61_RS02255
A6J61_RS02270	SM01403	A6J61_RS02270
A6J61_RS02290	SM01382	A6J61_RS02290
A6J61_RS02290	SM01383	A6J61_RS02290
A6J61_RS02305	SM00322	K homology RNA-binding domain
A6J61_RS02325	SM01374	A6J61_RS02325
A6J61_RS02330	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6J61_RS02385	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J61_RS02405	SM00662	RNA polymerases D
A6J61_RS02415	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS02420	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS02455	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS02465	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS02520	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J61_RS02520	SM01134	A6J61_RS02520
A6J61_RS02540	SM01133	A6J61_RS02540
A6J61_RS02565	SM00829	Enoylreductase
A6J61_RS02570	SM00829	Enoylreductase
A6J61_RS02745	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6J61_RS02785	SM01133	A6J61_RS02785
A6J61_RS02790	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
A6J61_RS02810	SM00899	A6J61_RS02810
A6J61_RS02890	SM00357	Cold shock protein domain
A6J61_RS02890	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS02890	SM00959	Rho termination factor, N-terminal domain
A6J61_RS02905	SM00937	A6J61_RS02905
A6J61_RS02920	SM00226	Low molecular weight phosphatase family
A6J61_RS02975	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS03040	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J61_RS03045	SM00155	Phospholipase D. Active site motifs.
A6J61_RS03080	SM00487	DEAD-like helicases superfamily
A6J61_RS03080	SM00490	helicase superfamily c-terminal domain
A6J61_RS03105	SM01005	Alanine racemase, C-terminal domain
A6J61_RS03120	SM00331	Sigma factor PP2C-like phosphatases
A6J61_RS03120	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A6J61_RS03140	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J61_RS03140	SM00732	Likely ribonuclease with RNase H fold.
A6J61_RS03145	SM00731	SprT homologues.
A6J61_RS03195	SM01329	A6J61_RS03195
A6J61_RS03200	SM00917	LeuA allosteric (dimerisation) domain
A6J61_RS03245	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6J61_RS03250	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS03255	SM00881	CoA binding domain
A6J61_RS03275	SM00354	helix_turn _helix lactose operon repressor
A6J61_RS03280	SM00640	Glycosyl hydrolases family 32
A6J61_RS03290	SM00448	cheY-homologous receiver domain
A6J61_RS03290	SM00850	LytTr DNA-binding domain
A6J61_RS03300	SM00794	Staphylococcal AgrD protein
A6J61_RS03305	SM00793	Accessory gene regulator B
A6J61_RS03330	SM00883	Chaperonin 10 Kd subunit
A6J61_RS03350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J61_RS03355	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS03365	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS03415	SM01131	A6J61_RS03415
A6J61_RS03425	SM00710	Parallel beta-helix repeats
A6J61_RS03470	SM00998	Adenylosuccinate lyase C-terminus
A6J61_RS03490	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J61_RS03490	SM00292	breast cancer carboxy-terminal domain
A6J61_RS03490	SM00532	Ligase N family
A6J61_RS03520	SM00845	GatB domain
A6J61_RS03525	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A6J61_RS03550	SM00479	A6J61_RS03550
A6J61_RS03600	SM00387	Histidine kinase-like ATPases
A6J61_RS03605	SM00421	helix_turn_helix, Lux Regulon
A6J61_RS03605	SM00448	cheY-homologous receiver domain
A6J61_RS03620	SM00226	Low molecular weight phosphatase family
A6J61_RS03685	SM00478	endonuclease III
A6J61_RS03685	SM00525	A6J61_RS03685
A6J61_RS03695	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS03880	SM00062	Bacterial periplasmic substrate-binding proteins
A6J61_RS03880	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
A6J61_RS03925	SM00387	Histidine kinase-like ATPases
A6J61_RS03930	SM00421	helix_turn_helix, Lux Regulon
A6J61_RS03930	SM00448	cheY-homologous receiver domain
A6J61_RS03935	SM00530	Helix-turn-helix XRE-family like proteins 
A6J61_RS03960	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J61_RS03995	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS04085	SM01234	A6J61_RS04085
A6J61_RS04160	SM00047	Lysozyme subfamily 2
A6J61_RS04210	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J61_RS04225	SM00450	Rhodanese Homology Domain
A6J61_RS04240	SM00363	S4 RNA-binding domain
A6J61_RS04270	SM00849	Metallo-beta-lactamase superfamily
A6J61_RS04300	SM00843	A6J61_RS04300
A6J61_RS04320	SM00830	Chorismate mutase type II
A6J61_RS04325	SM00354	helix_turn _helix lactose operon repressor
A6J61_RS04335	SM00822	A6J61_RS04335
A6J61_RS04365	SM00363	S4 RNA-binding domain
A6J61_RS04370	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6J61_RS04375	SM00563	Phosphate acyltransferases
A6J61_RS04410	SM00363	S4 RNA-binding domain
A6J61_RS04410	SM01390	A6J61_RS04410
A6J61_RS04420	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
A6J61_RS04435	SM00981	A6J61_RS04435
A6J61_RS04465	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A6J61_RS04465	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A6J61_RS04475	SM00849	Metallo-beta-lactamase superfamily
A6J61_RS04485	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J61_RS04495	SM00481	DNA polymerase alpha chain like domain
A6J61_RS04500	SM00919	Malic enzyme, NAD binding domain
A6J61_RS04500	SM01274	A6J61_RS04500
A6J61_RS04535	SM01329	A6J61_RS04535
A6J61_RS04540	SM00448	cheY-homologous receiver domain
A6J61_RS04540	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS04545	SM00387	Histidine kinase-like ATPases
A6J61_RS04545	SM00388	His Kinase A (phosphoacceptor) domain
A6J61_RS04550	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6J61_RS04550	SM00475	5'-3' exonuclease
A6J61_RS04550	SM00482	DNA polymerase A domain
A6J61_RS04555	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
A6J61_RS04555	SM01232	A6J61_RS04555
A6J61_RS04565	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6J61_RS04570	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J61_RS04570	SM00876	Biotin and Thiamin Synthesis associated domain
A6J61_RS04585	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS04590	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6J61_RS04630	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS04630	SM00994	ClpX C4-type zinc finger
A6J61_RS04630	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J61_RS04660	SM01004	Delta-aminolevulinic acid dehydratase
A6J61_RS04745	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J61_RS04750	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS04765	SM01323	A6J61_RS04765
A6J61_RS04785	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J61_RS04785	SM00954	Region found in RelA / SpoT proteins
A6J61_RS04795	SM00287	Bacterial SH3 domain homologues
A6J61_RS04795	SM00646	A6J61_RS04795
A6J61_RS04820	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS04850	SM00028	Tetratricopeptide repeats
A6J61_RS04855	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS04860	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6J61_RS04870	SM00732	Likely ribonuclease with RNase H fold.
A6J61_RS04905	SM00796	Allophanate hydrolase subunit 1
A6J61_RS04910	SM00797	Allophanate hydrolase subunit 2
A6J61_RS04920	SM00878	Biotin carboxylase C-terminal domain
A6J61_RS04955	SM01103	A6J61_RS04955
A6J61_RS04965	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J61_RS04990	SM00849	Metallo-beta-lactamase superfamily
A6J61_RS05005	SM00838	Elongation factor G C-terminus
A6J61_RS05010	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J61_RS05030	SM00271	DnaJ molecular chaperone homology domain
A6J61_RS05045	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J61_RS05105	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J61_RS05115	SM00400	zinc finger
A6J61_RS05115	SM00493	A6J61_RS05115
A6J61_RS05135	SM00487	DEAD-like helicases superfamily
A6J61_RS05135	SM00490	helicase superfamily c-terminal domain
A6J61_RS05140	SM00518	AP endonuclease family 2
A6J61_RS05145	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS05180	SM00028	Tetratricopeptide repeats
A6J61_RS05200	SM00849	Metallo-beta-lactamase superfamily
A6J61_RS05260	SM00450	Rhodanese Homology Domain
A6J61_RS05290	SM00841	Elongation factor P, C-terminal
A6J61_RS05290	SM01185	A6J61_RS05290
A6J61_RS05300	SM00878	Biotin carboxylase C-terminal domain
A6J61_RS05355	SM00861	Transketolase, pyrimidine binding domain
A6J61_RS05380	SM01350	A6J61_RS05380
A6J61_RS05385	SM00354	helix_turn _helix lactose operon repressor
A6J61_RS05390	SM00642	Alpha-amylase domain
A6J61_RS05395	SM00342	helix_turn_helix, arabinose operon control protein
A6J61_RS05395	SM00871	Bacterial transcription activator, effector binding domain
A6J61_RS05455	SM00363	S4 RNA-binding domain
A6J61_RS05460	SM00448	cheY-homologous receiver domain
A6J61_RS05460	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS05465	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J61_RS05465	SM00387	Histidine kinase-like ATPases
A6J61_RS05465	SM00388	His Kinase A (phosphoacceptor) domain
A6J61_RS05485	SM00487	DEAD-like helicases superfamily
A6J61_RS05485	SM00490	helicase superfamily c-terminal domain
A6J61_RS05490	SM00257	Lysin motif
A6J61_RS05505	SM00870	A6J61_RS05505
A6J61_RS05515	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J61_RS05530	SM00411	bacterial (prokaryotic) histone like domain
A6J61_RS05550	SM00562	A6J61_RS05550
A6J61_RS05610	SM00479	A6J61_RS05610
A6J61_RS05610	SM00491	A6J61_RS05610
A6J61_RS05625	SM00478	endonuclease III
A6J61_RS05625	SM00525	A6J61_RS05625
A6J61_RS05665	SM00981	A6J61_RS05665
A6J61_RS05680	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
A6J61_RS05680	SM00475	5'-3' exonuclease
A6J61_RS05755	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS05780	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS05790	SM00859	Semialdehyde dehydrogenase, NAD binding domain
A6J61_RS05795	SM01130	A6J61_RS05795
A6J61_RS05815	SM01005	Alanine racemase, C-terminal domain
A6J61_RS05835	SM00357	Cold shock protein domain
A6J61_RS05865	SM00327	von Willebrand factor (vWF) type A domain
A6J61_RS05890	SM00861	Transketolase, pyrimidine binding domain
A6J61_RS05895	SM00387	Histidine kinase-like ATPases
A6J61_RS05895	SM00388	His Kinase A (phosphoacceptor) domain
A6J61_RS05900	SM00448	cheY-homologous receiver domain
A6J61_RS05900	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS05905	SM00014	Acid phosphatase homologues
A6J61_RS05920	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6J61_RS05920	SM00245	tail specific protease
A6J61_RS05965	SM00932	Scaffold protein Nfu/NifU N terminal
A6J61_RS06005	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6J61_RS06015	SM01007	Class II Aldolase and Adducin N-terminal domain
A6J61_RS06085	SM00434	DNA Topoisomerase IV
A6J61_RS06090	SM00387	Histidine kinase-like ATPases
A6J61_RS06090	SM00433	TopoisomeraseII
A6J61_RS06095	SM01207	A6J61_RS06095
A6J61_RS06145	SM00861	Transketolase, pyrimidine binding domain
A6J61_RS06170	SM01240	A6J61_RS06170
A6J61_RS06185	SM01060	A6J61_RS06185
A6J61_RS06235	SM00318	Staphylococcal nuclease homologues
A6J61_RS06250	SM00421	helix_turn_helix, Lux Regulon
A6J61_RS06250	SM00448	cheY-homologous receiver domain
A6J61_RS06265	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS06270	SM00155	Phospholipase D. Active site motifs.
A6J61_RS06280	SM01230	A6J61_RS06280
A6J61_RS06285	SM00422	helix_turn_helix, mercury resistance
A6J61_RS06340	SM00853	MutL C terminal dimerisation domain
A6J61_RS06340	SM01340	A6J61_RS06340
A6J61_RS06345	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6J61_RS06345	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6J61_RS06360	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J61_RS06400	SM00322	K homology RNA-binding domain
A6J61_RS06400	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J61_RS06405	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS06410	SM00852	Probable molybdopterin binding domain
A6J61_RS06420	SM00530	Helix-turn-helix XRE-family like proteins 
A6J61_RS06445	SM00866	A6J61_RS06445
A6J61_RS06450	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS06450	SM00843	A6J61_RS06450
A6J61_RS06455	SM00849	Metallo-beta-lactamase superfamily
A6J61_RS06465	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J61_RS06465	SM00322	K homology RNA-binding domain
A6J61_RS06470	SM01387	A6J61_RS06470
A6J61_RS06475	SM00904	Riboflavin kinase
A6J61_RS06505	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J61_RS06505	SM00322	K homology RNA-binding domain
A6J61_RS06515	SM00479	A6J61_RS06515
A6J61_RS06515	SM00481	DNA polymerase alpha chain like domain
A6J61_RS06570	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS06570	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J61_RS06590	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
A6J61_RS06590	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
A6J61_RS06590	SM00493	A6J61_RS06590
A6J61_RS06605	SM00257	Lysin motif
A6J61_RS06610	SM00881	CoA binding domain
A6J61_RS06680	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS06680	SM00962	SRP54-type protein, GTPase domain
A6J61_RS06680	SM00963	SRP54-type protein, helical bundle domain
A6J61_RS06690	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS06690	SM00962	SRP54-type protein, GTPase domain
A6J61_RS06690	SM00963	SRP54-type protein, helical bundle domain
A6J61_RS06695	SM00968	SMC proteins Flexible Hinge Domain
A6J61_RS06700	SM00358	Double-stranded RNA binding motif
A6J61_RS06700	SM00535	Ribonuclease III family
A6J61_RS06710	SM00822	A6J61_RS06710
A6J61_RS06715	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
A6J61_RS06730	SM00487	DEAD-like helicases superfamily
A6J61_RS06730	SM00490	helicase superfamily c-terminal domain
A6J61_RS06735	SM01120	A6J61_RS06735
A6J61_RS06735	SM01121	A6J61_RS06735
A6J61_RS06750	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
A6J61_RS06765	SM00220	Serine/Threonine protein kinases, catalytic domain
A6J61_RS06765	SM00740	A6J61_RS06765
A6J61_RS06770	SM00331	Sigma factor PP2C-like phosphatases
A6J61_RS06770	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
A6J61_RS06795	SM00487	DEAD-like helicases superfamily
A6J61_RS06795	SM00490	helicase superfamily c-terminal domain
A6J61_RS06805	SM01409	A6J61_RS06805
A6J61_RS06810	SM00072	Guanylate kinase homologues.
A6J61_RS06835	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6J61_RS06840	SM00851	MGS-like domain
A6J61_RS06840	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
A6J61_RS06840	SM01209	A6J61_RS06840
A6J61_RS06845	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
A6J61_RS06870	SM00363	S4 RNA-binding domain
A6J61_RS06895	SM00363	S4 RNA-binding domain
A6J61_RS06920	SM00864	Tubulin/FtsZ family, GTPase domain
A6J61_RS06920	SM00865	Tubulin/FtsZ family, C-terminal domain
A6J61_RS06925	SM00842	Cell division protein FtsA
A6J61_RS06945	SM00740	A6J61_RS06945
A6J61_RS07015	SM00465	GIY-YIG type nucleases (URI domain)
A6J61_RS07025	SM00463	Small MutS-related domain
A6J61_RS07025	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
A6J61_RS07025	SM00534	ATPase domain of DNA mismatch repair MUTS family
A6J61_RS07030	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J61_RS07030	SM00481	DNA polymerase alpha chain like domain
A6J61_RS07030	SM00483	DNA polymerase X family
A6J61_RS07050	SM00873	B3/4 domain
A6J61_RS07050	SM00874	tRNA synthetase B5 domain
A6J61_RS07050	SM00896	Ferredoxin-fold anticodon binding domain
A6J61_RS07060	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6J61_RS07140	SM00878	Biotin carboxylase C-terminal domain
A6J61_RS07165	SM00838	Elongation factor G C-terminus
A6J61_RS07215	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS07220	SM00530	Helix-turn-helix XRE-family like proteins 
A6J61_RS07240	SM00861	Transketolase, pyrimidine binding domain
A6J61_RS07265	SM00849	Metallo-beta-lactamase superfamily
A6J61_RS07315	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS07325	SM01209	A6J61_RS07325
A6J61_RS07325	SM01210	A6J61_RS07325
A6J61_RS07330	SM00798	AICARFT/IMPCHase bienzyme
A6J61_RS07330	SM00851	MGS-like domain
A6J61_RS07355	SM01211	A6J61_RS07355
A6J61_RS07375	SM01001	AIR carboxylase
A6J61_RS07450	SM00047	Lysozyme subfamily 2
A6J61_RS07450	SM00644	A6J61_RS07450
A6J61_RS07455	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS07540	SM00914	A6J61_RS07540
A6J61_RS07570	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
A6J61_RS07610	SM00422	helix_turn_helix, mercury resistance
A6J61_RS07640	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J61_RS07640	SM00924	MgtE intracellular N domain
A6J61_RS07655	SM00954	Region found in RelA / SpoT proteins
A6J61_RS07665	SM01118	A6J61_RS07665
A6J61_RS07720	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS07725	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS07745	SM00825	Beta-ketoacyl synthase
A6J61_RS07760	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS07760	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J61_RS07845	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
A6J61_RS07855	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J61_RS07865	SM01298	A6J61_RS07865
A6J61_RS07935	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS07940	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS07945	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS07975	SM00823	Phosphopantetheine attachment site
A6J61_RS08070	SM00729	Elongator protein 3, MiaB family, Radical SAM
A6J61_RS08265	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS08295	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS08295	SM00930	A6J61_RS08295
A6J61_RS08305	SM00493	A6J61_RS08305
A6J61_RS08345	SM00855	Phosphoglycerate mutase family
A6J61_RS08450	SM00450	Rhodanese Homology Domain
A6J61_RS08455	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS08490	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J61_RS08490	SM00357	Cold shock protein domain
A6J61_RS08490	SM00955	A6J61_RS08490
A6J61_RS08510	SM01192	A6J61_RS08510
A6J61_RS08510	SM01193	A6J61_RS08510
A6J61_RS08530	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
A6J61_RS08605	SM00487	DEAD-like helicases superfamily
A6J61_RS08605	SM00490	helicase superfamily c-terminal domain
A6J61_RS08620	SM00257	Lysin motif
A6J61_RS08630	SM00957	SecA DEAD-like domain
A6J61_RS08630	SM00958	SecA preprotein cross-linking domain
A6J61_RS08635	SM00644	A6J61_RS08635
A6J61_RS08670	SM00267	diguanylate cyclase
A6J61_RS08725	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS08745	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS08790	SM00046	Diacylglycerol kinase catalytic domain (presumed)
A6J61_RS08820	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS08825	SM00341	Helicase and RNase D C-terminal
A6J61_RS08825	SM00487	DEAD-like helicases superfamily
A6J61_RS08825	SM00490	helicase superfamily c-terminal domain
A6J61_RS08825	SM00956	A6J61_RS08825
A6J61_RS08830	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS08845	SM00797	Allophanate hydrolase subunit 2
A6J61_RS08850	SM00796	Allophanate hydrolase subunit 1
A6J61_RS08900	SM01091	Transporter associated domain
A6J61_RS08915	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J61_RS08915	SM01134	A6J61_RS08915
A6J61_RS08970	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A6J61_RS08975	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS09055	SM00342	helix_turn_helix, arabinose operon control protein
A6J61_RS09065	SM00257	Lysin motif
A6J61_RS09085	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS09090	SM00387	Histidine kinase-like ATPases
A6J61_RS09095	SM00448	cheY-homologous receiver domain
A6J61_RS09095	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS09140	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS09175	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS09210	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS09235	SM00529	Helix-turn-helix diphteria tox regulatory element
A6J61_RS09235	SM00899	A6J61_RS09235
A6J61_RS09240	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS09365	SM00422	helix_turn_helix, mercury resistance
A6J61_RS09370	SM00478	endonuclease III
A6J61_RS09375	SM00836	DALR anticodon binding domain
A6J61_RS09375	SM01016	Arginyl tRNA synthetase N terminal dom
A6J61_RS09395	SM00829	Enoylreductase
A6J61_RS09405	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
A6J61_RS09510	SM00986	Uracil DNA glycosylase superfamily
A6J61_RS09510	SM00987	UreE urease accessory protein, C-terminal domain 
A6J61_RS09545	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
A6J61_RS09615	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
A6J61_RS09615	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
A6J61_RS09680	SM00838	Elongation factor G C-terminus
A6J61_RS09680	SM00889	Elongation factor G, domain IV
A6J61_RS09700	SM00663	RNA polymerase I subunit A N-terminus
A6J61_RS09735	SM00649	Ribosomal protein L11/L12
A6J61_RS09740	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
A6J61_RS09740	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
A6J61_RS09765	SM00967	RNA 2'-O ribose methyltransferase substrate binding
A6J61_RS09770	SM00535	Ribonuclease III family
A6J61_RS09775	SM00840	A6J61_RS09775
A6J61_RS09790	SM00670	Large family of predicted nucleotide-binding domains
A6J61_RS09795	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS09800	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS09800	SM01086	C-terminal, D2-small domain, of ClpB protein
A6J61_RS09835	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J61_RS09920	SM00905	Dihydroneopterin aldolase
A6J61_RS09940	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS09950	SM00977	TilS substrate C-terminal domain
A6J61_RS09955	SM00316	Ribosomal protein S1-like RNA-binding domain
A6J61_RS09965	SM00363	S4 RNA-binding domain
A6J61_RS09980	SM00487	DEAD-like helicases superfamily
A6J61_RS09980	SM00490	helicase superfamily c-terminal domain
A6J61_RS09980	SM00982	A6J61_RS09980
A6J61_RS09980	SM01058	CarD-like/TRCF domain
A6J61_RS09995	SM01400	A6J61_RS09995
A6J61_RS10030	SM00650	Ribosomal RNA adenine dimethylases
A6J61_RS10035	SM00493	A6J61_RS10035
A6J61_RS10055	SM00465	GIY-YIG type nucleases (URI domain)
A6J61_RS10125	SM00278	Helix-hairpin-helix DNA-binding motif class 1
A6J61_RS10125	SM00493	A6J61_RS10125
A6J61_RS10135	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS10150	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J61_RS10150	SM00866	A6J61_RS10150
A6J61_RS10155	SM00642	Alpha-amylase domain
A6J61_RS10205	SM00257	Lysin motif
A6J61_RS10220	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS10220	SM00930	A6J61_RS10220
A6J61_RS10230	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS10265	SM00014	Acid phosphatase homologues
A6J61_RS10290	SM00833	Cobalamin synthesis protein cobW C-terminal domain
A6J61_RS10295	SM00849	Metallo-beta-lactamase superfamily
A6J61_RS10300	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS10315	SM00116	Domain in cystathionine beta-synthase and other proteins.
A6J61_RS10315	SM01240	A6J61_RS10315
A6J61_RS10380	SM00855	Phosphoglycerate mutase family
A6J61_RS10470	SM00470	ParB-like nuclease domain
A6J61_RS10520	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS10540	SM00387	Histidine kinase-like ATPases
A6J61_RS10540	SM00388	His Kinase A (phosphoacceptor) domain
A6J61_RS10550	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS10555	SM00448	cheY-homologous receiver domain
A6J61_RS10555	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS10565	SM00640	Glycosyl hydrolases family 32
A6J61_RS10570	SM00354	helix_turn _helix lactose operon repressor
A6J61_RS10605	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS10620	SM00530	Helix-turn-helix XRE-family like proteins 
A6J61_RS10625	SM00062	Bacterial periplasmic substrate-binding proteins
A6J61_RS10645	SM00829	Enoylreductase
A6J61_RS10665	SM00470	ParB-like nuclease domain
A6J61_RS10675	SM01228	A6J61_RS10675
A6J61_RS10695	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS10695	SM00760	Bacterial dnaA protein helix-turn-helix domain
A6J61_RS10700	SM00480	DNA polymerase III beta subunit
A6J61_RS10715	SM00387	Histidine kinase-like ATPases
A6J61_RS10715	SM00433	TopoisomeraseII
A6J61_RS10720	SM00434	DNA Topoisomerase IV
A6J61_RS10755	SM00267	diguanylate cyclase
A6J61_RS10770	SM00788	Adenylosuccinate synthetase
A6J61_RS10785	SM00448	cheY-homologous receiver domain
A6J61_RS10785	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS10790	SM00091	PAS domain
A6J61_RS10790	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
A6J61_RS10790	SM00387	Histidine kinase-like ATPases
A6J61_RS10790	SM00388	His Kinase A (phosphoacceptor) domain
A6J61_RS10830	SM00849	Metallo-beta-lactamase superfamily
A6J61_RS10845	SM00344	helix_turn_helix ASNC type
A6J61_RS10910	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS10945	SM00387	Histidine kinase-like ATPases
A6J61_RS10950	SM00448	cheY-homologous receiver domain
A6J61_RS10950	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS10965	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS10980	SM00823	Phosphopantetheine attachment site
A6J61_RS11035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
A6J61_RS11035	SM00866	A6J61_RS11035
A6J61_RS11045	SM01133	A6J61_RS11045
A6J61_RS11075	SM00448	cheY-homologous receiver domain
A6J61_RS11075	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS11080	SM00387	Histidine kinase-like ATPases
A6J61_RS11080	SM00388	His Kinase A (phosphoacceptor) domain
A6J61_RS11105	SM00725	NEAr Transporter domain
A6J61_RS11120	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11125	SM00725	NEAr Transporter domain
A6J61_RS11130	SM00725	NEAr Transporter domain
A6J61_RS11135	SM00725	NEAr Transporter domain
A6J61_RS11150	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11165	SM00047	Lysozyme subfamily 2
A6J61_RS11195	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS11210	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11240	SM00420	helix_turn_helix, Deoxyribose operon repressor
A6J61_RS11240	SM01134	A6J61_RS11240
A6J61_RS11245	SM00855	Phosphoglycerate mutase family
A6J61_RS11250	SM00387	Histidine kinase-like ATPases
A6J61_RS11250	SM00388	His Kinase A (phosphoacceptor) domain
A6J61_RS11255	SM00448	cheY-homologous receiver domain
A6J61_RS11255	SM00862	Transcriptional regulatory protein, C terminal
A6J61_RS11290	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11310	SM00346	helix_turn_helix isocitrate lyase regulation
A6J61_RS11325	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
A6J61_RS11340	SM00422	helix_turn_helix, mercury resistance
A6J61_RS11345	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
A6J61_RS11365	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11400	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11405	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11505	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
A6J61_RS11525	SM00357	Cold shock protein domain
A6J61_RS11535	SM00939	X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain
A6J61_RS11590	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11635	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11640	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11650	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS11660	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS11670	SM00867	YceI-like domain 
A6J61_RS11745	SM00900	A6J61_RS11745
A6J61_RS11780	SM00861	Transketolase, pyrimidine binding domain
A6J61_RS11835	SM00347	helix_turn_helix multiple antibiotic resistance protein
A6J61_RS11860	SM00530	Helix-turn-helix XRE-family like proteins 
A6J61_RS11900	SM00530	Helix-turn-helix XRE-family like proteins 
A6J61_RS11920	SM00506	Appr-1"-p processing enzyme
A6J61_RS11980	SM01130	A6J61_RS11980
A6J61_RS12075	SM00450	Rhodanese Homology Domain
A6J61_RS12105	SM00382	ATPases associated with a variety of cellular activities
A6J61_RS12115	SM00530	Helix-turn-helix XRE-family like proteins 
A6J61_RS12150	SM00047	Lysozyme subfamily 2
